Query psy2837
Match_columns 107
No_of_seqs 124 out of 1132
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 18:09:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2837.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2837hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256|consensus 99.9 5E-24 1.1E-28 167.0 7.4 106 1-107 581-688 (691)
2 PLN02614 long-chain acyl-CoA s 99.9 7.4E-23 1.6E-27 161.5 8.9 105 1-106 550-656 (666)
3 PLN02387 long-chain-fatty-acid 99.8 6.6E-22 1.4E-26 156.8 5.1 106 1-106 589-696 (696)
4 PLN02430 long-chain-fatty-acid 99.8 7E-21 1.5E-25 150.2 8.8 105 1-106 547-653 (660)
5 PTZ00297 pantothenate kinase; 99.8 2.4E-20 5.2E-25 156.6 9.5 92 1-106 890-1002(1452)
6 PTZ00216 acyl-CoA synthetase; 99.8 4.2E-20 9.1E-25 146.5 9.7 105 2-107 594-699 (700)
7 KOG1180|consensus 99.8 1.3E-20 2.9E-25 144.7 5.1 107 1-107 569-677 (678)
8 PLN02861 long-chain-fatty-acid 99.8 1.6E-19 3.4E-24 142.4 8.8 105 1-106 547-653 (660)
9 PTZ00342 acyl-CoA synthetase; 99.8 2.4E-19 5.2E-24 143.6 8.9 105 1-106 624-744 (746)
10 PLN02736 long-chain acyl-CoA s 99.8 6.8E-19 1.5E-23 138.3 5.2 102 1-106 541-648 (651)
11 COG1022 FAA1 Long-chain acyl-C 99.7 1.5E-17 3.3E-22 130.6 3.6 106 1-107 503-609 (613)
12 PRK12582 acyl-CoA synthetase; 99.6 1.8E-15 3.9E-20 118.4 9.1 103 1-107 512-615 (624)
13 PRK08180 feruloyl-CoA synthase 99.5 2.7E-14 5.9E-19 111.6 8.6 105 1-107 500-604 (614)
14 PRK08316 acyl-CoA synthetase; 96.6 0.013 2.8E-07 44.6 7.4 39 59-103 485-523 (523)
15 PTZ00237 acetyl-CoA synthetase 96.0 0.029 6.2E-07 44.8 6.7 45 47-98 577-622 (647)
16 PRK07445 O-succinylbenzoic aci 95.7 0.033 7.1E-07 42.5 6.0 38 59-102 413-450 (452)
17 PRK05852 acyl-CoA synthetase; 95.4 0.049 1.1E-06 42.0 5.8 35 59-99 498-532 (534)
18 PLN02860 o-succinylbenzoate-Co 95.4 0.043 9.4E-07 42.7 5.5 42 58-104 518-559 (563)
19 TIGR01734 D-ala-DACP-lig D-ala 95.3 0.071 1.5E-06 40.5 6.4 36 55-97 465-500 (502)
20 PRK07514 malonyl-CoA synthase; 95.0 0.16 3.6E-06 38.5 7.7 37 59-101 467-503 (504)
21 PRK04813 D-alanine--poly(phosp 94.6 0.15 3.2E-06 38.7 6.4 34 59-98 469-502 (503)
22 PRK07824 O-succinylbenzoic aci 94.4 0.25 5.4E-06 36.1 7.0 35 59-99 323-357 (358)
23 PRK08276 long-chain-fatty-acid 94.3 0.43 9.3E-06 36.4 8.4 40 55-101 459-498 (502)
24 PRK06839 acyl-CoA synthetase; 94.1 0.3 6.5E-06 37.0 7.2 32 59-96 461-492 (496)
25 PRK03584 acetoacetyl-CoA synth 93.8 0.29 6.2E-06 39.0 6.8 35 58-98 590-624 (655)
26 PRK07470 acyl-CoA synthetase; 93.6 0.43 9.4E-06 36.6 7.4 35 59-99 484-518 (528)
27 TIGR01217 ac_ac_CoA_syn acetoa 93.4 0.48 1E-05 37.9 7.5 35 58-98 591-625 (652)
28 PLN03052 acetate--CoA ligase; 93.2 0.44 9.5E-06 38.9 7.1 49 47-101 675-723 (728)
29 PRK06164 acyl-CoA synthetase; 93.1 0.65 1.4E-05 35.8 7.6 38 59-102 495-535 (540)
30 PRK06188 acyl-CoA synthetase; 93.0 0.68 1.5E-05 35.5 7.7 35 59-99 483-517 (524)
31 KOG1176|consensus 93.0 0.18 4E-06 40.0 4.6 39 55-100 495-533 (537)
32 TIGR02188 Ac_CoA_lig_AcsA acet 92.7 0.68 1.5E-05 36.6 7.4 35 58-98 567-601 (625)
33 PRK09088 acyl-CoA synthetase; 92.5 0.78 1.7E-05 34.8 7.3 35 59-99 451-485 (488)
34 PRK05605 long-chain-fatty-acid 92.3 1.1 2.4E-05 34.9 8.1 37 59-101 535-571 (573)
35 PLN02574 4-coumarate--CoA liga 92.3 0.84 1.8E-05 35.6 7.4 35 59-99 520-554 (560)
36 PRK13391 acyl-CoA synthetase; 92.0 0.71 1.5E-05 35.3 6.6 35 58-98 474-508 (511)
37 PLN02246 4-coumarate--CoA liga 91.9 0.8 1.7E-05 35.3 6.8 34 59-98 502-535 (537)
38 PLN02479 acetate-CoA ligase 91.9 0.7 1.5E-05 36.1 6.5 37 55-99 522-558 (567)
39 PRK00174 acetyl-CoA synthetase 91.6 0.79 1.7E-05 36.3 6.6 35 58-98 575-609 (637)
40 PRK07788 acyl-CoA synthetase; 91.6 0.7 1.5E-05 35.8 6.2 30 59-94 517-546 (549)
41 PRK03640 O-succinylbenzoic aci 91.5 0.37 8.1E-06 36.4 4.6 35 59-99 448-482 (483)
42 PRK04319 acetyl-CoA synthetase 91.5 1 2.2E-05 35.1 7.0 36 55-97 522-557 (570)
43 PRK12316 peptide synthase; Pro 91.5 0.2 4.3E-06 48.7 3.5 53 47-105 5014-5066(5163)
44 PLN02330 4-coumarate--CoA liga 91.4 1.5 3.3E-05 33.9 7.9 36 59-100 507-542 (546)
45 TIGR03443 alpha_am_amid L-amin 91.4 0.31 6.8E-06 42.0 4.4 42 54-102 790-831 (1389)
46 PLN03051 acyl-activating enzym 91.1 1.3 2.7E-05 34.1 7.1 37 59-101 457-493 (499)
47 PRK06187 long-chain-fatty-acid 91.1 1.4 3.1E-05 33.4 7.3 35 59-99 485-519 (521)
48 PRK06060 acyl-CoA synthetase; 90.8 1 2.2E-05 36.3 6.6 34 59-98 458-491 (705)
49 PRK08315 AMP-binding domain pr 90.8 1.6 3.4E-05 33.8 7.4 37 59-101 517-553 (559)
50 PLN02654 acetate-CoA ligase 90.7 1.5 3.3E-05 35.2 7.5 35 59-99 606-640 (666)
51 PRK09274 peptide synthase; Pro 90.5 1.5 3.3E-05 33.9 7.1 48 47-101 501-550 (552)
52 PRK06178 acyl-CoA synthetase; 90.0 1.9 4E-05 33.6 7.3 34 59-99 532-565 (567)
53 PRK12583 acyl-CoA synthetase; 89.9 0.67 1.4E-05 35.8 4.7 38 58-101 517-554 (558)
54 PRK06018 putative acyl-CoA syn 89.8 1.8 3.9E-05 33.5 7.0 35 59-99 500-534 (542)
55 PRK10946 entE enterobactin syn 89.6 1.9 4E-05 33.4 7.0 38 58-101 497-534 (536)
56 PRK13382 acyl-CoA synthetase; 89.6 1.3 2.9E-05 34.2 6.2 31 59-95 506-536 (537)
57 PLN03102 acyl-activating enzym 89.5 1.1 2.4E-05 35.2 5.7 41 54-101 516-556 (579)
58 PRK07786 long-chain-fatty-acid 89.5 0.98 2.1E-05 35.0 5.4 39 55-100 487-525 (542)
59 PRK12406 long-chain-fatty-acid 89.5 2.6 5.6E-05 32.2 7.6 35 59-99 469-503 (509)
60 PRK13295 cyclohexanecarboxylat 89.3 2.1 4.6E-05 33.1 7.1 35 58-98 509-543 (547)
61 PRK06155 crotonobetaine/carnit 89.1 2.3 4.9E-05 33.1 7.1 33 59-97 490-522 (542)
62 COG0365 Acs Acyl-coenzyme A sy 88.6 2.2 4.8E-05 34.0 6.7 45 47-98 476-521 (528)
63 PRK05850 acyl-CoA synthetase; 88.3 2.8 6.1E-05 32.6 7.2 31 64-99 537-568 (578)
64 PRK06087 short chain acyl-CoA 88.0 1.8 4E-05 33.4 5.9 39 58-102 501-539 (547)
65 PRK07798 acyl-CoA synthetase; 87.9 2.3 5E-05 32.4 6.4 32 59-96 498-529 (533)
66 PRK12316 peptide synthase; Pro 87.8 0.99 2.2E-05 44.2 5.1 63 2-95 3478-3540(5163)
67 TIGR02372 4_coum_CoA_lig 4-cou 87.7 2.2 4.8E-05 32.3 6.1 34 49-89 352-386 (386)
68 PRK05857 acyl-CoA synthetase; 87.7 1.3 2.8E-05 34.4 4.9 46 47-99 485-531 (540)
69 PRK07638 acyl-CoA synthetase; 87.6 0.92 2E-05 34.5 4.0 41 58-105 446-486 (487)
70 PRK06145 acyl-CoA synthetase; 87.5 3.5 7.5E-05 31.3 7.1 33 59-97 463-495 (497)
71 TIGR03098 ligase_PEP_1 acyl-Co 86.9 2.8 6.1E-05 31.8 6.3 31 59-95 484-514 (515)
72 PRK08162 acyl-CoA synthetase; 86.5 5.1 0.00011 30.9 7.6 36 59-101 506-541 (545)
73 PRK05620 long-chain-fatty-acid 86.4 1.4 3.1E-05 34.3 4.6 36 58-99 522-557 (576)
74 PRK07868 acyl-CoA synthetase; 86.2 3 6.4E-05 35.4 6.6 32 59-96 924-955 (994)
75 PRK08279 long-chain-acyl-CoA s 86.1 1.1 2.5E-05 35.1 3.9 35 59-99 530-564 (600)
76 PRK10524 prpE propionyl-CoA sy 86.0 1.9 4E-05 34.1 5.1 43 48-97 560-603 (629)
77 PRK13390 acyl-CoA synthetase; 85.8 3 6.5E-05 31.8 6.0 32 55-93 469-500 (501)
78 PF13193 AMP-binding_C: AMP-bi 85.7 0.92 2E-05 25.8 2.5 24 59-87 48-73 (73)
79 PRK09029 O-succinylbenzoic aci 85.7 1.4 3E-05 33.3 4.1 38 55-99 416-453 (458)
80 PRK08314 long-chain-fatty-acid 85.7 2.3 5E-05 32.7 5.4 35 58-98 507-541 (546)
81 TIGR02316 propion_prpE propion 85.1 1.6 3.4E-05 34.7 4.3 42 49-97 560-602 (628)
82 PRK07867 acyl-CoA synthetase; 85.1 4.7 0.0001 31.3 6.8 34 58-97 472-505 (529)
83 PRK07529 AMP-binding domain pr 85.0 6.9 0.00015 31.2 7.9 34 61-100 538-571 (632)
84 PRK07008 long-chain-fatty-acid 84.5 2.4 5.2E-05 32.8 5.0 36 59-100 499-534 (539)
85 PRK05677 long-chain-fatty-acid 84.5 2 4.3E-05 33.4 4.6 34 59-98 523-556 (562)
86 PRK07787 acyl-CoA synthetase; 83.4 4.6 0.0001 30.6 6.1 31 59-95 439-469 (471)
87 KOG1177|consensus 83.3 2.5 5.3E-05 33.7 4.5 49 47-101 541-589 (596)
88 PRK13388 acyl-CoA synthetase; 83.0 5 0.00011 31.2 6.2 34 58-97 471-504 (540)
89 COG0318 CaiC Acyl-CoA syntheta 82.5 2.6 5.6E-05 33.0 4.5 35 59-99 493-527 (534)
90 PRK10252 entF enterobactin syn 81.1 5.6 0.00012 34.2 6.3 32 58-95 932-963 (1296)
91 PRK08043 bifunctional acyl-[ac 80.5 4 8.7E-05 33.0 5.0 35 58-98 678-712 (718)
92 PRK09188 serine/threonine prot 80.4 2.3 5.1E-05 32.2 3.5 32 59-97 295-326 (365)
93 TIGR02262 benz_CoA_lig benzoat 79.2 1.6 3.5E-05 33.3 2.3 40 49-94 467-506 (508)
94 KOG1175|consensus 78.8 8.8 0.00019 31.4 6.3 46 46-97 555-600 (626)
95 PRK12467 peptide synthase; Pro 78.6 1.9 4E-05 41.6 2.9 35 59-99 984-1018(3956)
96 PRK13383 acyl-CoA synthetase; 78.6 11 0.00024 28.9 6.7 29 59-93 486-514 (516)
97 TIGR03208 cyc_hxne_CoA_lg cycl 78.0 6.7 0.00015 30.3 5.4 31 58-94 507-537 (538)
98 PRK06814 acylglycerophosphoeth 77.6 6.1 0.00013 33.6 5.4 38 58-101 1097-1134(1140)
99 PF08557 Lipid_DES: Sphingolip 77.5 1.6 3.5E-05 22.5 1.3 19 87-106 16-34 (39)
100 PRK06710 long-chain-fatty-acid 76.8 5.1 0.00011 31.1 4.5 35 59-99 521-555 (563)
101 PRK08633 2-acyl-glycerophospho 75.5 7.8 0.00017 32.7 5.5 37 58-100 1108-1144(1146)
102 PRK08974 long-chain-fatty-acid 75.4 5.1 0.00011 31.1 4.2 38 59-102 521-558 (560)
103 PRK08008 caiC putative crotono 75.4 11 0.00025 28.7 6.0 29 59-93 488-516 (517)
104 TIGR02275 DHB_AMP_lig 2,3-dihy 75.3 5.5 0.00012 30.6 4.3 30 58-93 497-526 (527)
105 PRK12492 long-chain-fatty-acid 74.9 4.7 0.0001 31.4 3.8 32 58-95 529-560 (562)
106 PRK09192 acyl-CoA synthetase; 74.1 15 0.00032 28.8 6.4 33 62-99 533-566 (579)
107 PRK12467 peptide synthase; Pro 73.3 5 0.00011 38.9 4.2 33 58-96 3559-3591(3956)
108 PRK05691 peptide synthase; Val 72.8 9.4 0.0002 37.4 5.8 32 58-95 4193-4224(4334)
109 PRK07656 long-chain-fatty-acid 72.3 6 0.00013 30.0 3.8 31 59-95 482-512 (513)
110 PRK06334 long chain fatty acid 70.4 7.6 0.00016 30.2 4.0 34 59-98 501-534 (539)
111 PRK08751 putative long-chain f 67.6 8.5 0.00018 29.8 3.8 32 59-96 526-557 (560)
112 PRK07769 long-chain-fatty-acid 65.9 5.7 0.00012 31.5 2.6 30 65-99 584-614 (631)
113 PRK05691 peptide synthase; Val 65.3 5.9 0.00013 38.7 2.9 51 44-105 515-566 (4334)
114 PRK12476 putative fatty-acid-- 65.0 36 0.00078 26.9 6.9 30 65-99 576-606 (612)
115 TIGR03205 pimA dicarboxylate-- 64.5 10 0.00022 29.3 3.7 32 55-93 509-540 (541)
116 PRK05851 long-chain-fatty-acid 64.4 6.6 0.00014 30.3 2.6 32 63-99 490-522 (525)
117 TIGR01923 menE O-succinylbenzo 61.1 8.8 0.00019 28.5 2.7 28 59-92 408-435 (436)
118 PRK07059 Long-chain-fatty-acid 60.2 14 0.00031 28.6 3.9 32 58-95 523-554 (557)
119 PRK08308 acyl-CoA synthetase; 58.4 15 0.00032 27.4 3.5 29 59-93 379-407 (414)
120 KOG2825|consensus 48.2 14 0.00031 27.2 1.9 25 82-106 270-294 (323)
121 PRK07768 long-chain-fatty-acid 40.6 29 0.00063 26.8 2.7 30 64-98 514-544 (545)
122 PF11046 HycA_repressor: Trans 32.7 43 0.00094 22.2 2.2 27 80-106 101-128 (148)
123 PRK10198 formate hydrogenlyase 29.8 51 0.0011 21.9 2.2 18 89-106 111-128 (152)
124 COG1021 EntE Peptide arylation 28.4 2.5E+02 0.0055 22.4 6.0 38 56-99 501-538 (542)
125 TIGR02159 PA_CoA_Oxy4 phenylac 27.2 59 0.0013 21.5 2.2 40 44-87 41-80 (146)
126 PF07026 DUF1317: Protein of u 26.7 48 0.001 18.6 1.4 24 74-97 16-40 (60)
127 TIGR02945 SUF_assoc FeS assemb 26.3 1.1E+02 0.0023 18.2 3.1 41 44-87 53-93 (99)
128 CHL00103 rpl35 ribosomal prote 26.1 22 0.00047 20.3 -0.0 13 81-93 15-27 (65)
129 PF13438 DUF4113: Domain of un 25.6 55 0.0012 17.5 1.5 13 45-57 2-14 (52)
130 PF15205 PLAC9: Placenta-speci 24.6 1.2E+02 0.0026 17.6 2.8 33 73-105 2-34 (74)
131 TIGR00001 rpmI_bact ribosomal 23.5 25 0.00054 19.9 -0.1 13 81-93 14-26 (63)
132 KOG1179|consensus 21.0 47 0.001 27.2 0.9 32 58-95 578-609 (649)
133 COG0291 RpmI Ribosomal protein 20.5 33 0.00071 19.7 -0.0 14 81-94 15-28 (65)
No 1
>KOG1256|consensus
Probab=99.90 E-value=5e-24 Score=167.01 Aligned_cols=106 Identities=25% Similarity=0.436 Sum_probs=95.5
Q ss_pred CccCC-CCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHH-hhhCCCCCcceeeEEEecCCCCCC
Q psy2837 1 MGSDK-KKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRA-NLKSISNAQKIQKFEFLPADFSIP 78 (107)
Q Consensus 1 V~G~~-~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~-n~~~l~~~e~i~~~~l~~~~ft~e 78 (107)
|+|++ ++||+|||+|+.+.++++++ ...+..+..+||++..+++.+..++.+. |++++.+||+|++|+|.++|||++
T Consensus 581 V~g~s~~~~LvaiVvpd~e~~~~~a~-~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~Fsie 659 (691)
T KOG1256|consen 581 VLGDSLRSFLVAIVVPDPEVLKSWAA-KDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIE 659 (691)
T ss_pred EECCcchhcEEEEEecChhhchhhHH-HccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEeccccccc
Confidence 57888 99999999999877666555 3345578999999999999999999997 777899999999999999999999
Q ss_pred CCcccccCCCchHHHHHHHHHHHHhhhcC
Q psy2837 79 TGELGPTMKVKRPFVVKKYQSIIDKFYDV 107 (107)
Q Consensus 79 ng~lT~t~KlkR~~v~~~y~~~I~~ly~~ 107 (107)
||+||||+|+||+.+.++|+++||+||+.
T Consensus 660 nglltPTlK~KR~~l~~~yk~~Id~mY~~ 688 (691)
T KOG1256|consen 660 NGLLTPTLKIKRPQLLKYYKKQIDELYKE 688 (691)
T ss_pred CCccchhhhhhhHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999963
No 2
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.88 E-value=7.4e-23 Score=161.53 Aligned_cols=105 Identities=20% Similarity=0.304 Sum_probs=83.3
Q ss_pred CccCC-CCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHH-hhhCCCCCcceeeEEEecCCCCCC
Q psy2837 1 MGSDK-KKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRA-NLKSISNAQKIQKFEFLPADFSIP 78 (107)
Q Consensus 1 V~G~~-~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~-n~~~l~~~e~i~~~~l~~~~ft~e 78 (107)
|+|++ ++|++|||+|+.+....+... ..+.....++++++.+++.|++++.+. |+.+|++||+|++|+|++++||++
T Consensus 550 V~g~~~~~~l~alvv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ 628 (666)
T PLN02614 550 VYGNSFESFLVAIANPNQQILERWAAE-NGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDME 628 (666)
T ss_pred EEecCCcceEEEEEeCCHHHHHHHHHh-cCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCc
Confidence 68998 899999999986532111000 000012445566667888999999886 444599999999999999999999
Q ss_pred CCcccccCCCchHHHHHHHHHHHHhhhc
Q psy2837 79 TGELGPTMKVKRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 79 ng~lT~t~KlkR~~v~~~y~~~I~~ly~ 106 (107)
||+||||+|+||+.|.++|++.|++||+
T Consensus 629 ng~lTpt~K~kR~~i~~~y~~~i~~ly~ 656 (666)
T PLN02614 629 RDLLTPTFKKKRPQLLKYYQSVIDEMYK 656 (666)
T ss_pred CCcCCHhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996
No 3
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.85 E-value=6.6e-22 Score=156.78 Aligned_cols=106 Identities=15% Similarity=0.241 Sum_probs=84.2
Q ss_pred CccCC-CCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHHh-hhCCCCCcceeeEEEecCCCCCC
Q psy2837 1 MGSDK-KKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRAN-LKSISNAQKIQKFEFLPADFSIP 78 (107)
Q Consensus 1 V~G~~-~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~n-~~~l~~~e~i~~~~l~~~~ft~e 78 (107)
|+|++ ++|++|+|+|+.+....+............++++++.+.+.+.+.+++++ +.+|++||+|++|+|+++|||++
T Consensus 589 V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~ 668 (696)
T PLN02387 589 VHADPFHSYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPE 668 (696)
T ss_pred EEecCCcceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCC
Confidence 67998 99999999998653221100000000135566777778999999999983 33599999999999999999999
Q ss_pred CCcccccCCCchHHHHHHHHHHHHhhhc
Q psy2837 79 TGELGPTMKVKRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 79 ng~lT~t~KlkR~~v~~~y~~~I~~ly~ 106 (107)
||+||||||+||+.|.++|+++|++||.
T Consensus 669 ~g~lT~t~K~~R~~i~~~y~~~i~~ly~ 696 (696)
T PLN02387 669 SGLVTAALKLKREQIRKKFKDDLKKLYE 696 (696)
T ss_pred CCcCChhhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999995
No 4
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.84 E-value=7e-21 Score=150.21 Aligned_cols=105 Identities=13% Similarity=0.170 Sum_probs=82.7
Q ss_pred CccCC-CCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHHh-hhCCCCCcceeeEEEecCCCCCC
Q psy2837 1 MGSDK-KKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRAN-LKSISNAQKIQKFEFLPADFSIP 78 (107)
Q Consensus 1 V~G~~-~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~n-~~~l~~~e~i~~~~l~~~~ft~e 78 (107)
|+|++ +++++|+|+|+.+....+.. ...+.....+++.++.+++.|+++|++++ ..+|++||+|++|+|+++|||++
T Consensus 547 V~G~~~~~~~~A~vv~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~ 625 (660)
T PLN02430 547 VYGDSFKSMLVAVVVPNEENTNKWAK-DNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVE 625 (660)
T ss_pred EEecCCcceEEEEEEcCHHHHHHHHH-hCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCc
Confidence 57887 89999999998542111000 00000124455666778999999999984 33599999999999999999999
Q ss_pred CCcccccCCCchHHHHHHHHHHHHhhhc
Q psy2837 79 TGELGPTMKVKRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 79 ng~lT~t~KlkR~~v~~~y~~~I~~ly~ 106 (107)
||+||||||+||+.|.++|++.|++||+
T Consensus 626 ~g~lT~t~K~~R~~i~~~y~~~i~~ly~ 653 (660)
T PLN02430 626 RDLVTATLKKRRNNLLKYYQVEIDEMYR 653 (660)
T ss_pred CCcCChhhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996
No 5
>PTZ00297 pantothenate kinase; Provisional
Probab=99.83 E-value=2.4e-20 Score=156.58 Aligned_cols=92 Identities=16% Similarity=0.269 Sum_probs=72.0
Q ss_pred CccCCCCceEEEEeecccCCcCCCCCCccchHHHH-HHHHhcCh-------------------HHHHHHHHHHH-hhhCC
Q psy2837 1 MGSDKKKFLSMLLALRTKMNADTGEPLDELETDTK-DWLKSLGV-------------------YKATQAAIDRA-NLKSI 59 (107)
Q Consensus 1 V~G~~~~~l~alv~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~v-------------------~~~i~~~l~~~-n~~~l 59 (107)
||||++++++|||+||.+. +. +|+.+.++ .+.+.+.++++ ..+++
T Consensus 890 V~Gd~~k~lvALVvpd~e~--------------l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l 955 (1452)
T PTZ00297 890 LYADPSRPIIAIVSPNRDT--------------VEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGL 955 (1452)
T ss_pred EEecCCCceEEEEEeCHHH--------------HHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCc
Confidence 6899999999999998653 33 34332221 22344454443 22236
Q ss_pred CCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHHHhhhc
Q psy2837 60 SNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 60 ~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I~~ly~ 106 (107)
..+|.++.|+|+++|||++||+||||||+||+.|.++|+++|++||+
T Consensus 956 ~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie~LY~ 1002 (1452)
T PTZ00297 956 HPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIERFYS 1002 (1452)
T ss_pred CccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHHHHhc
Confidence 78999999999999999999999999999999999999999999996
No 6
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.82 E-value=4.2e-20 Score=146.45 Aligned_cols=105 Identities=13% Similarity=0.251 Sum_probs=82.4
Q ss_pred ccCCCCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHHh-hhCCCCCcceeeEEEecCCCCCCCC
Q psy2837 2 GSDKKKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRAN-LKSISNAQKIQKFEFLPADFSIPTG 80 (107)
Q Consensus 2 ~G~~~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~n-~~~l~~~e~i~~~~l~~~~ft~eng 80 (107)
.|++++|++|+|+|+.+...++... ..+.....+++.++.+++.+.+.|++++ +.++.+||+|++|++++++||++||
T Consensus 594 ~~~~~~~l~a~vv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g 672 (700)
T PTZ00216 594 VHPARSYICALVLTDEAKAMAFAKE-HGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENG 672 (700)
T ss_pred EecCCceEEEEEecCHHHHHHHHHH-cCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCC
Confidence 3557999999999985422111000 0001134566677778999999999983 3459999999999999999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHhhhcC
Q psy2837 81 ELGPTMKVKRPFVVKKYQSIIDKFYDV 107 (107)
Q Consensus 81 ~lT~t~KlkR~~v~~~y~~~I~~ly~~ 107 (107)
+||||||+||+.|.++|++.|++||+.
T Consensus 673 ~lT~t~K~~R~~i~~~y~~~i~~ly~~ 699 (700)
T PTZ00216 673 VLTAAMKLKRRVIDERYADLIKELFAD 699 (700)
T ss_pred CCChhhccchHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999973
No 7
>KOG1180|consensus
Probab=99.81 E-value=1.3e-20 Score=144.71 Aligned_cols=107 Identities=17% Similarity=0.195 Sum_probs=89.6
Q ss_pred CccCC-CCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHH-hhhCCCCCcceeeEEEecCCCCCC
Q psy2837 1 MGSDK-KKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRA-NLKSISNAQKIQKFEFLPADFSIP 78 (107)
Q Consensus 1 V~G~~-~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~-n~~~l~~~e~i~~~~l~~~~ft~e 78 (107)
||+|+ +.+++||||||...+...........+.+.++|.++.+++++.++|.+. ++++|.++|.+.++.|.++|||+|
T Consensus 569 vyAd~~~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPe 648 (678)
T KOG1180|consen 569 VYADSNKSKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPE 648 (678)
T ss_pred EecccccceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCC
Confidence 68997 9999999999965332211111111237888999999999999999987 677799999999999999999999
Q ss_pred CCcccccCCCchHHHHHHHHHHHHhhhcC
Q psy2837 79 TGELGPTMKVKRPFVVKKYQSIIDKFYDV 107 (107)
Q Consensus 79 ng~lT~t~KlkR~~v~~~y~~~I~~ly~~ 107 (107)
||++|+.+|+||+.|..+|++.|++||..
T Consensus 649 nGlvT~A~KLKRk~I~~~~k~ei~~~Y~~ 677 (678)
T KOG1180|consen 649 NGLVTAALKLKRKEILAAYKKEIDRLYKE 677 (678)
T ss_pred ccccHHHHHhhHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999973
No 8
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.80 E-value=1.6e-19 Score=142.45 Aligned_cols=105 Identities=21% Similarity=0.335 Sum_probs=78.3
Q ss_pred CccCC-CCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHHhh-hCCCCCcceeeEEEecCCCCCC
Q psy2837 1 MGSDK-KKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRANL-KSISNAQKIQKFEFLPADFSIP 78 (107)
Q Consensus 1 V~G~~-~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~n~-~~l~~~e~i~~~~l~~~~ft~e 78 (107)
|+|++ ..+++|+|+|+.+....+... ..+.....+++++..+...+.+++++.+. .++++||+|++|+++++|||++
T Consensus 547 V~G~~~~~~~~A~vv~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ 625 (660)
T PLN02861 547 VYGNSFESFLVAVVVPDRQALEDWAAN-NNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIE 625 (660)
T ss_pred EEecCCcceeEEEEEcCHHHHHHHHHH-cCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcc
Confidence 57887 689999999974311110000 00000123344444456778888888753 3699999999999999999999
Q ss_pred CCcccccCCCchHHHHHHHHHHHHhhhc
Q psy2837 79 TGELGPTMKVKRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 79 ng~lT~t~KlkR~~v~~~y~~~I~~ly~ 106 (107)
||+||||||+||+.|.++|++.|++||+
T Consensus 626 ng~lT~t~K~~R~~i~~~y~~~I~~lY~ 653 (660)
T PLN02861 626 RDLITPTFKLKRPQLLKYYKDCIDQLYS 653 (660)
T ss_pred cCcCCHHHhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996
No 9
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.79 E-value=2.4e-19 Score=143.60 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=77.6
Q ss_pred CccCC-CCceEEEEeecccCCcCCCCCC-----ccch-HHHHH-----HHHhcChHHHHHHHHHHH-hhhCCCCCcceee
Q psy2837 1 MGSDK-KKFLSMLLALRTKMNADTGEPL-----DELE-TDTKD-----WLKSLGVYKATQAAIDRA-NLKSISNAQKIQK 67 (107)
Q Consensus 1 V~G~~-~~~l~alv~p~~~~~~~~~~~~-----~~~~-~~~~~-----~~~~~~v~~~i~~~l~~~-n~~~l~~~e~i~~ 67 (107)
|+|++ ++|++|||+||++....+.... ..+. ....+ .++++.+.+.+.+.++++ |+.+|++||+|++
T Consensus 624 VvG~~~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~ 703 (746)
T PTZ00342 624 VYGDDSMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIIND 703 (746)
T ss_pred EEccCCccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeee
Confidence 68987 8899999999975322211000 0010 11222 233445688899999998 4445999999999
Q ss_pred EEEecCCCCCCCCcccccCCCchHHHHHHHH---HHHHhhhc
Q psy2837 68 FEFLPADFSIPTGELGPTMKVKRPFVVKKYQ---SIIDKFYD 106 (107)
Q Consensus 68 ~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~---~~I~~ly~ 106 (107)
|+|+++|||+ ||+||||+|+||+.|.++|+ +.|++||.
T Consensus 704 ~~l~~~~~t~-~~~lTpt~KlkR~~v~~~y~~~i~~i~~~y~ 744 (746)
T PTZ00342 704 IYLTSKVWDT-NNYLTPTFKVKRFYVFKDYAFFIDQVKKIYK 744 (746)
T ss_pred EEEecCCCCC-CCccChhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999 57999999999999999999 67777885
No 10
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.76 E-value=6.8e-19 Score=138.29 Aligned_cols=102 Identities=22% Similarity=0.308 Sum_probs=83.0
Q ss_pred CccCC-CCceEEEEeecccCCcC----CCCCCccchHHHHHHHHhcChHHHHHHHHHHHhh-hCCCCCcceeeEEEecCC
Q psy2837 1 MGSDK-KKFLSMLLALRTKMNAD----TGEPLDELETDTKDWLKSLGVYKATQAAIDRANL-KSISNAQKIQKFEFLPAD 74 (107)
Q Consensus 1 V~G~~-~~~l~alv~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~n~-~~l~~~e~i~~~~l~~~~ 74 (107)
|+|++ ..+++|+|+|+...... .+.. ...+.++++++.+++.|.+.|+++++ .+|++||+|++|.+++++
T Consensus 541 V~g~~~~~~~~A~vv~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 616 (651)
T PLN02736 541 VYGDSLNSSLVAVVVVDPEVLKAWAASEGIK----YEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEP 616 (651)
T ss_pred EEecCCCceeEEEEEeCHHHHHHHHHHcCCC----ccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCC
Confidence 56876 78999999997532110 0111 01466777777889999999999842 259999999999999999
Q ss_pred CCCCCCcccccCCCchHHHHHHHHHHHHhhhc
Q psy2837 75 FSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 75 ft~eng~lT~t~KlkR~~v~~~y~~~I~~ly~ 106 (107)
||++||++|||||++|+.|.++|++.|++||+
T Consensus 617 ~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~~y~ 648 (651)
T PLN02736 617 FTVENGLLTPTFKVKRPQAKAYFAKAISDMYA 648 (651)
T ss_pred CcCCCCcCChhhhhhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999996
No 11
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.68 E-value=1.5e-17 Score=130.59 Aligned_cols=106 Identities=25% Similarity=0.463 Sum_probs=88.9
Q ss_pred CccCCCCceEEEEeecccCCcCCCCCCc-cchHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCcceeeEEEecCCCCCCC
Q psy2837 1 MGSDKKKFLSMLLALRTKMNADTGEPLD-ELETDTKDWLKSLGVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPT 79 (107)
Q Consensus 1 V~G~~~~~l~alv~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~en 79 (107)
|+|++++|++|||+||.+...++..+.. ..+....+++.+..+.+.+...+...+.. ...+|+|++|.+++++||.++
T Consensus 503 vvg~~k~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~-~~~~E~i~~~~~~~~~~t~~~ 581 (613)
T COG1022 503 VVGDDKKFLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKR-LFGFEQIKKFVLLPKEFTPEN 581 (613)
T ss_pred EEecCCcceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhc-ccchhhhheeeeccccccccc
Confidence 6899999999999999765443322222 11234667788888899999999999876 589999999999999999999
Q ss_pred CcccccCCCchHHHHHHHHHHHHhhhcC
Q psy2837 80 GELGPTMKVKRPFVVKKYQSIIDKFYDV 107 (107)
Q Consensus 80 g~lT~t~KlkR~~v~~~y~~~I~~ly~~ 107 (107)
|++|||+|++|+.+.++|++.|+.+|.+
T Consensus 582 ~~~t~t~klkR~~i~~~~~~~i~~~y~~ 609 (613)
T COG1022 582 GELTPTLKLKRHVILDRYKDEIEAVYSR 609 (613)
T ss_pred CccccchhhhHHHHHHhhhhHHHHHhhc
Confidence 9999999999999999999999999964
No 12
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.62 E-value=1.8e-15 Score=118.45 Aligned_cols=103 Identities=13% Similarity=0.236 Sum_probs=80.9
Q ss_pred CccCCCCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCc-ceeeEEEecCCCCCCC
Q psy2837 1 MGSDKKKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRANLKSISNAQ-KIQKFEFLPADFSIPT 79 (107)
Q Consensus 1 V~G~~~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~n~~~l~~~e-~i~~~~l~~~~ft~en 79 (107)
|+|.++++++++|+|+..++....... .. ...+.+.+..+.+.+...|+++|.. ++.++ +|++|.+++++|+.++
T Consensus 512 VvG~~~~~~g~lv~p~~~~~~~~~~~~-~~--~~~~~~~~~~l~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 587 (624)
T PRK12582 512 VAGQDRAFIGLLAWPNPAACRQLAGDP-DA--APEDVVKHPAVLAILREGLSAHNAE-AGGSSSRIARALLMTEPPSIDA 587 (624)
T ss_pred EEcCCCCcEEEEEecCHHHHHHHHhcC-CC--CHHHHhcCHHHHHHHHHHHHHHHhh-cCCChhheEEEEEeCCCCCccC
Confidence 679999999999999864321100000 00 0112233445788899999999987 89999 9999999999999999
Q ss_pred CcccccCCCchHHHHHHHHHHHHhhhcC
Q psy2837 80 GELGPTMKVKRPFVVKKYQSIIDKFYDV 107 (107)
Q Consensus 80 g~lT~t~KlkR~~v~~~y~~~I~~ly~~ 107 (107)
|.+|+|||++|+.+.++|+++||+||+.
T Consensus 588 g~~t~~~~~~R~~~~~~y~~~i~~ly~~ 615 (624)
T PRK12582 588 GEITDKGYINQRAVLERRAALVERLYAE 615 (624)
T ss_pred CcCCccccccHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999973
No 13
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.54 E-value=2.7e-14 Score=111.63 Aligned_cols=105 Identities=12% Similarity=0.197 Sum_probs=77.8
Q ss_pred CccCCCCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCcceeeEEEecCCCCCCCC
Q psy2837 1 MGSDKKKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTG 80 (107)
Q Consensus 1 V~G~~~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng 80 (107)
|+|..+.+++|+|+|+........... ......+......+++.+.+.|.++|......+++|++|.+++++|+..+|
T Consensus 500 V~g~~~~~~~a~V~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~g 577 (614)
T PRK08180 500 ITGHDRDEIGLLVFPNLDACRRLAGLL--ADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLDAG 577 (614)
T ss_pred EEcCCCCceEEEEEcCHHHHHHHHhhc--ccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCccC
Confidence 578888999999999743100000000 000011122334578889999999986645668899999999999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHhhhcC
Q psy2837 81 ELGPTMKVKRPFVVKKYQSIIDKFYDV 107 (107)
Q Consensus 81 ~lT~t~KlkR~~v~~~y~~~I~~ly~~ 107 (107)
.+|+|||++|+.|.++|+++|++||+.
T Consensus 578 k~t~~~~~~R~~~~~~y~~~i~~lY~~ 604 (614)
T PRK08180 578 EITDKGYINQRAVLARRAALVEALYAD 604 (614)
T ss_pred ccCccccccHHHHHHHhHHHHHHHhCC
Confidence 999999999999999999999999973
No 14
>PRK08316 acyl-CoA synthetase; Validated
Probab=96.56 E-value=0.013 Score=44.59 Aligned_cols=39 Identities=10% Similarity=0.270 Sum_probs=33.6
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHHHh
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDK 103 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I~~ 103 (107)
++.++.+..+.++. .+ ..|++||+.|+.+.+.|.+.+++
T Consensus 485 l~~~~~p~~i~~v~-~~-----p~t~~gKi~r~~l~~~~~~~~~~ 523 (523)
T PRK08316 485 LAGFKVPKRVIFVD-EL-----PRNPSGKILKRELRERYAGAFTD 523 (523)
T ss_pred cccCCCCcEEEEec-CC-----CCCCccceeHHHHHHHHHhhccC
Confidence 88999999999884 33 69999999999999999988763
No 15
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=95.96 E-value=0.029 Score=44.80 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=34.5
Q ss_pred HHHHHHHH-hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 47 TQAAIDRA-NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 47 i~~~l~~~-n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
+.++|.+. +++ ++.+..++.|.++++- -.|++||+.|+.+.+.+.
T Consensus 577 l~~~i~~~~~~~-l~~~~~P~~i~~v~~l------P~T~sGKi~R~~Lr~~~~ 622 (647)
T PTZ00237 577 LKNEINNIITQD-IESLAVLRKIIIVNQL------PKTKTGKIPRQIISKFLN 622 (647)
T ss_pred HHHHHHHHHHhh-cCccccCcEEEEcCCC------CCCCCccEeHHHHHHHHc
Confidence 44455444 444 9999999999998754 389999999999987763
No 16
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=95.74 E-value=0.033 Score=42.52 Aligned_cols=38 Identities=13% Similarity=0.178 Sum_probs=33.1
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 102 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I~ 102 (107)
++.|..++.+.++++ + -.|++||+.|+.+.+.|++.|+
T Consensus 413 L~~~~~P~~i~~v~~-l-----P~t~~GKi~r~~L~~~~~~~~~ 450 (452)
T PRK07445 413 LSPFKQPKHWIPVPQ-L-----PRNPQGKINRQQLQQIAVQRLG 450 (452)
T ss_pred CCcccCCeEEEEecC-C-----CCCCCcccCHHHHHHHHHHhhC
Confidence 899999999988854 3 5899999999999999998774
No 17
>PRK05852 acyl-CoA synthetase; Validated
Probab=95.37 E-value=0.049 Score=42.00 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=30.3
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.|+++..|.++++- .+|++||+.|+.+.+.|.+
T Consensus 498 l~~~~~P~~i~~v~~i------P~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 498 LAAFEIPASFQEASGL------PHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred cccccCCeEEEEhhhc------CCCCCccccHHHHHHHhcc
Confidence 8899999999988643 4999999999999998865
No 18
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=95.36 E-value=0.043 Score=42.73 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=35.8
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHHHhh
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKF 104 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I~~l 104 (107)
+|+.|+.++.|.++.++| -+|++||+.|+.+.+.+...+..+
T Consensus 518 ~L~~~~~P~~~~~~~~~l-----P~t~~GKi~r~~L~~~~~~~~~~~ 559 (563)
T PLN02860 518 NLSRFKIPKLFVQWRKPF-----PLTTTGKIRRDEVRREVLSHLQSL 559 (563)
T ss_pred cccccccceEEEEEecCC-----CCCcccchhHHHHHHHHHHHHhcc
Confidence 499999999998877777 499999999999999887776654
No 19
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=95.29 E-value=0.071 Score=40.49 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=29.4
Q ss_pred hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 55 NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 55 n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
++. ++.++.++.+..+++- ..|++||++|+++.+.+
T Consensus 465 ~~~-l~~~~~P~~~~~v~~l------P~t~~gKv~r~~l~~~~ 500 (502)
T TIGR01734 465 KKS-LPAYMIPRKFIYRDQL------PLTANGKIDRKALAEEV 500 (502)
T ss_pred hhh-ChhhcCCcEEEEcccc------CCCCCCcccHHHHHHhh
Confidence 344 8999999999887533 59999999999998765
No 20
>PRK07514 malonyl-CoA synthase; Validated
Probab=95.02 E-value=0.16 Score=38.52 Aligned_cols=37 Identities=11% Similarity=0.297 Sum_probs=31.0
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
++.+..++.|.++++ + .+|++||+.|+.+.+.|++..
T Consensus 467 l~~~~~p~~i~~v~~-~-----p~t~~gK~~r~~l~~~~~~~~ 503 (504)
T PRK07514 467 LARFKQPKRVFFVDE-L-----PRNTMGKVQKNLLREQYADLF 503 (504)
T ss_pred cccCCCCcEEEEecc-C-----CCCCCcceeHHHHHHHHHhhc
Confidence 788999999998854 3 489999999999998887653
No 21
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=94.55 E-value=0.15 Score=38.68 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=28.5
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
++.+..++.+..+++ + .+|++||+.|+.+.+.+.
T Consensus 469 l~~~~~P~~i~~~~~-~-----P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 469 LMEYMIPRKFIYRDS-L-----PLTPNGKIDRKALIEEVN 502 (503)
T ss_pred CccccCCeEEEEecc-C-----CCCCCCCCcHHHHHHHhc
Confidence 888999999988753 3 599999999999987764
No 22
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=94.35 E-value=0.25 Score=36.12 Aligned_cols=35 Identities=11% Similarity=0.260 Sum_probs=29.5
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.|..+..|.+++ .+ ..|++||+.|+.+.+.|.+
T Consensus 323 l~~~~~P~~i~~v~-~l-----P~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 323 LDRTAAPRELHVVD-EL-----PRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred CccccCCCEEEEec-CC-----CCCCCccccHHHHHHHhhc
Confidence 88999999998885 34 4899999999999988864
No 23
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=94.27 E-value=0.43 Score=36.36 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=32.3
Q ss_pred hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 55 NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 55 n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
+.. ++.+..+..+..+++. -.|++||+.|+.+.++|-+.-
T Consensus 459 ~~~-l~~~~~p~~i~~~~~l------P~t~~GKi~r~~L~~~~~~~~ 498 (502)
T PRK08276 459 RGR-LAHYKCPRSIDFEDEL------PRTPTGKLYKRRLRDRYWEGR 498 (502)
T ss_pred Hhh-ccCCCCCcEEEEecCC------CCCcccchhHHHHHHHHHhhh
Confidence 344 8899999999988554 389999999999999986643
No 24
>PRK06839 acyl-CoA synthetase; Validated
Probab=94.10 E-value=0.3 Score=36.96 Aligned_cols=32 Identities=16% Similarity=0.275 Sum_probs=26.8
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 96 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~ 96 (107)
++.++++..|..+++ + ..|++||+.|..+.+.
T Consensus 461 l~~~~~P~~~~~v~~-~-----P~t~~GKi~r~~l~~~ 492 (496)
T PRK06839 461 LAKYKIPKEIVFLKE-L-----PKNATGKIQKAQLVNQ 492 (496)
T ss_pred CcCCCCCcEEEEecc-C-----CCCccccccHHHHHHH
Confidence 889999999988854 3 4899999999999754
No 25
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=93.76 E-value=0.29 Score=38.99 Aligned_cols=35 Identities=17% Similarity=0.017 Sum_probs=29.2
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
.++.|..+..|.++++ + -.|++||+.|+.+.+.+.
T Consensus 590 ~L~~~~~P~~i~~v~~-l-----P~t~sGKi~r~~lr~~~~ 624 (655)
T PRK03584 590 NLSPRHVPDKIIAVPD-I-----PRTLSGKKVELPVKKLLH 624 (655)
T ss_pred hCCCCcCCCEEEECCC-C-----CCCCCccchHHHHHHHHc
Confidence 3889999999998854 3 589999999999988764
No 26
>PRK07470 acyl-CoA synthetase; Validated
Probab=93.64 E-value=0.43 Score=36.63 Aligned_cols=35 Identities=11% Similarity=0.195 Sum_probs=29.3
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
|+.+..+..+.+++ .+ ..|++||+.|..+.+.|++
T Consensus 484 l~~~~~P~~~~~~~-~i-----P~t~~GKi~r~~l~~~~~~ 518 (528)
T PRK07470 484 VARYKLPKRFFFWD-AL-----PKSGYGKITKKMVREELEE 518 (528)
T ss_pred hhcCCCCcEEEEec-cC-----CCCCcccccHHHHHHHHHh
Confidence 78899999988875 34 6899999999999887765
No 27
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=93.38 E-value=0.48 Score=37.90 Aligned_cols=35 Identities=17% Similarity=0.027 Sum_probs=29.3
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
.|+.|..++.+.++++ + -.|++||+.|+.+.+.+.
T Consensus 591 ~l~~~~~P~~i~~v~~-l-----P~T~sGKi~r~~Lr~~~~ 625 (652)
T TIGR01217 591 GLSPRHVPDEIIEVPG-I-----PHTLTGKRVEVAVKRVLQ 625 (652)
T ss_pred hCCCCcCCCEEEECCC-C-----CCCCCccChHHHHHHHHc
Confidence 3899999999998864 3 489999999999988763
No 28
>PLN03052 acetate--CoA ligase; Provisional
Probab=93.21 E-value=0.44 Score=38.90 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=34.5
Q ss_pred HHHHHHHHhhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 47 TQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 47 i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
+.+.|.+.-...++++-.++.|.++++- -.|++||+.|+.+.+.+.+..
T Consensus 675 L~~~i~~~i~~~l~~~~~p~~i~~v~~l------P~T~sGKi~Rr~Lr~~~~~~~ 723 (728)
T PLN03052 675 LKKIFNSAIQKKLNPLFKVSAVVIVPSF------PRTASNKVMRRVLRQQLAQEL 723 (728)
T ss_pred HHHHHHHHHHhhcCCccCCCEEEEcCCC------CCCCchHHHHHHHHHHHHhhh
Confidence 4444444322237788888888888643 489999999999998887643
No 29
>PRK06164 acyl-CoA synthetase; Validated
Probab=93.07 E-value=0.65 Score=35.77 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=30.1
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccC---CCchHHHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTM---KVKRPFVVKKYQSIID 102 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~---KlkR~~v~~~y~~~I~ 102 (107)
++.+..+..|.++++ + -.|+++ |+.|+.+.+.++....
T Consensus 495 l~~~~~P~~i~~~~~-~-----P~t~~g~~~Ki~r~~L~~~~~~~~~ 535 (540)
T PRK06164 495 LAGFKVPARVQVVEA-F-----PVTESANGAKIQKHRLREMAQARLA 535 (540)
T ss_pred cccCcCCcEEEEecC-C-----CCCCCCccccccHHHHHHHHHHhhh
Confidence 888999998888853 3 578888 9999999887776543
No 30
>PRK06188 acyl-CoA synthetase; Validated
Probab=93.03 E-value=0.68 Score=35.50 Aligned_cols=35 Identities=11% Similarity=0.207 Sum_probs=29.3
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.+..+..|.++++ + .+|++||+.|+.+.+.|.+
T Consensus 483 l~~~~~p~~i~~v~~-~-----P~t~~gKi~r~~L~~~~~~ 517 (524)
T PRK06188 483 KGSVHAPKQVDFVDS-L-----PLTALGKPDKKALRARYWE 517 (524)
T ss_pred cccCCCCcEEEEecC-C-----CCCccccccHHHHHHHHHh
Confidence 778889999988853 4 5999999999999988854
No 31
>KOG1176|consensus
Probab=93.01 E-value=0.18 Score=39.99 Aligned_cols=39 Identities=13% Similarity=0.018 Sum_probs=32.5
Q ss_pred hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHH
Q psy2837 55 NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 100 (107)
Q Consensus 55 n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~ 100 (107)
+++ ++.|..++++.++++-. =||+||+.|+.+.+.|...
T Consensus 495 ~k~-l~~y~~~~~V~Fvd~lP------Ks~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 495 RKK-LPAYKLPGGVVFVDELP------KTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred Hhh-CChhhccCeEEEeccCC------CCCcchHHHHHHHHHHHhc
Confidence 344 88899999999997654 6899999999999998763
No 32
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=92.71 E-value=0.68 Score=36.55 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=28.8
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
.++.+..++.|.++++ + -.|++||+.|+.+.+.+.
T Consensus 567 ~l~~~~~P~~i~~v~~-l-----P~t~sGKi~r~~l~~~~~ 601 (625)
T TIGR02188 567 EIGPIAKPDKIRFVPG-L-----PKTRSGKIMRRLLRKIAA 601 (625)
T ss_pred hcCCCccCcEEEECCC-C-----CCCCCccchHHHHHHHHc
Confidence 3889999999988754 3 479999999999987654
No 33
>PRK09088 acyl-CoA synthetase; Validated
Probab=92.53 E-value=0.78 Score=34.82 Aligned_cols=35 Identities=3% Similarity=0.103 Sum_probs=28.9
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.|..+..|.+++ ++ .+|++||+.|+.+.+.+..
T Consensus 451 l~~~~~p~~i~~~~-~i-----P~t~~gKi~r~~l~~~~~~ 485 (488)
T PRK09088 451 LAKYKVPKHLRLVD-AL-----PRTASGKLQKARLRDALAA 485 (488)
T ss_pred CcCCCCCCEEEEcc-cC-----CCCCCCceeHHHHHHHHHh
Confidence 78888999888874 33 5899999999999887764
No 34
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=92.34 E-value=1.1 Score=34.85 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=30.1
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
++.++.+..+..++ .+ ..|++||+.|+.+.+.+...+
T Consensus 535 l~~~~~p~~i~~~~-~i-----P~t~~GKi~r~~L~~~~~~~~ 571 (573)
T PRK05605 535 LTRYKVPRRFYHVD-EL-----PRDQLGKVRRREVREELLEKL 571 (573)
T ss_pred CccccCCcEEEEec-cC-----CCCCcccccHHHHHHHHHHHh
Confidence 88898898888874 33 589999999999988776654
No 35
>PLN02574 4-coumarate--CoA ligase-like
Probab=92.30 E-value=0.84 Score=35.56 Aligned_cols=35 Identities=17% Similarity=0.315 Sum_probs=28.8
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.|..++.|.++++ + ..|++||+.|+.+.+.+..
T Consensus 520 l~~~~~p~~v~~v~~-i-----P~t~~GKi~r~~L~~~~~~ 554 (560)
T PLN02574 520 VAPYKKVRKVVFVQS-I-----PKSPAGKILRRELKRSLTN 554 (560)
T ss_pred ccCcccCcEEEEeec-c-----CCCCcchhhHHHHHHHHhh
Confidence 888999998888754 3 5799999999999887754
No 36
>PRK13391 acyl-CoA synthetase; Provisional
Probab=92.05 E-value=0.71 Score=35.34 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=29.6
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
.++.|+.+..|..+++- .+|+++|+.|+.+.+.|.
T Consensus 474 ~l~~~~~P~~i~~~~~~------P~t~~gKv~r~~l~~~~~ 508 (511)
T PRK13391 474 RLSRQKCPRSIDFEDEL------PRLPTGKLYKRLLRDRYW 508 (511)
T ss_pred hcccCcCCcEEEEeecC------CCCCccceeHHHHHHHhh
Confidence 38999999999987543 499999999999988875
No 37
>PLN02246 4-coumarate--CoA ligase
Probab=91.91 E-value=0.8 Score=35.33 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=28.9
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
++.|..+++|.+++ .| ..|++||+.|+.+.+.++
T Consensus 502 l~~~~~p~~i~~~~-~~-----P~t~~GKi~r~~L~~~~~ 535 (537)
T PLN02246 502 VVFYKRIHKVFFVD-SI-----PKAPSGKILRKDLRAKLA 535 (537)
T ss_pred CcCccccceEEEec-cC-----CCCCcchhhHHHHHHHHh
Confidence 88999999998875 34 589999999999988765
No 38
>PLN02479 acetate-CoA ligase
Probab=91.86 E-value=0.7 Score=36.07 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=28.9
Q ss_pred hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 55 NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 55 n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
+.. ++.|..++.+.+. ++ -+|++||++|+.+.+.+..
T Consensus 522 ~~~-l~~~~~P~~~~~~--~i-----P~t~~gKv~r~~L~~~~~~ 558 (567)
T PLN02479 522 RER-LPAYWVPKSVVFG--PL-----PKTATGKIQKHVLRAKAKE 558 (567)
T ss_pred Hhh-cccccCCceEEec--cC-----CCCCccCeeHHHHHHHHHh
Confidence 444 8999999988762 34 5799999999999876554
No 39
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=91.63 E-value=0.79 Score=36.32 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=28.5
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
.++.+..+..|.+++ .| -.|++||+.|+.+.+.+.
T Consensus 575 ~l~~~~~P~~i~~v~-~l-----P~t~~GKi~R~~L~~~~~ 609 (637)
T PRK00174 575 EIGPIAKPDVIQFAP-GL-----PKTRSGKIMRRILRKIAE 609 (637)
T ss_pred hcCCccCCCEEEEcC-CC-----CCCCCcchHHHHHHHHHc
Confidence 388999999999885 34 579999999999977653
No 40
>PRK07788 acyl-CoA synthetase; Validated
Probab=91.62 E-value=0.7 Score=35.77 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=25.4
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVV 94 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~ 94 (107)
++.|..++.|.+++ +| -+|++||+.|+.+.
T Consensus 517 l~~~~~P~~i~~v~-~l-----P~t~~GKi~r~~L~ 546 (549)
T PRK07788 517 LARYKVPRDVVFLD-EL-----PRNPTGKVLKRELR 546 (549)
T ss_pred hhcCCCCcEEEEeC-CC-----CCCCCcCEeHHHhh
Confidence 88999999999884 44 58999999999875
No 41
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=91.54 E-value=0.37 Score=36.38 Aligned_cols=35 Identities=11% Similarity=0.111 Sum_probs=30.2
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.|..++.|.++++- .+|++||+.|+.+.+.+++
T Consensus 448 l~~~~~p~~i~~~~~i------P~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 448 LAKYKVPKRFYFVEEL------PRNASGKLLRHELKQLVEE 482 (483)
T ss_pred ccCCCCCcEEEEeCCC------CCCCccceeHHHHHHHHhh
Confidence 8899999999988543 4999999999999998875
No 42
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=91.48 E-value=1 Score=35.10 Aligned_cols=36 Identities=11% Similarity=0.060 Sum_probs=29.0
Q ss_pred hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 55 NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 55 n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
++. ++.|.+++.+.+++ .+ ..|++||+.|+.+.+..
T Consensus 522 ~~~-l~~~~~P~~i~~v~-~i-----P~t~~GKv~r~~L~~~~ 557 (570)
T PRK04319 522 KKG-LGAHAAPREIEFKD-KL-----PKTRSGKIMRRVLKAWE 557 (570)
T ss_pred HHh-cccccCCcEEEEeC-CC-----CCCCchhhhHHHHHHHH
Confidence 444 89999999998874 33 58999999999997764
No 43
>PRK12316 peptide synthase; Provisional
Probab=91.47 E-value=0.2 Score=48.68 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=39.8
Q ss_pred HHHHHHHHhhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHHHhhh
Q psy2837 47 TQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 105 (107)
Q Consensus 47 i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I~~ly 105 (107)
+...|.+.....+++|..+..|.++++ | -+|++||+.|+.+.+.|.+.+++.|
T Consensus 5014 ~~~~l~~~l~~~lp~y~vP~~~~~~~~-l-----P~t~~GKvdR~~L~~~~~~~~~~~~ 5066 (5163)
T PRK12316 5014 LRDELKAALRERLPEYMVPAHLVFLAR-M-----PLTPNGKLDRKALPQPDASLLQQAY 5066 (5163)
T ss_pred hHHHHHHHHhccCchhhCCcceeeccc-C-----CCCCCcccChhhcCCcccccccccc
Confidence 444455543334999999999988754 4 5999999999999988887776665
No 44
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=91.39 E-value=1.5 Score=33.90 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=30.3
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 100 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~ 100 (107)
++.+..|+.|.++++ + ..|++||+.|+.+.+.|...
T Consensus 507 l~~~~~p~~~~~v~~-i-----P~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 507 VAHYKKVRVVQFVDS-I-----PKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred cccccCceEEEEecc-C-----CCCCCcceeHHHHHHHHHhh
Confidence 889999999888743 3 58999999999999888654
No 45
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=91.36 E-value=0.31 Score=42.02 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=31.6
Q ss_pred HhhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHHH
Q psy2837 54 ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 102 (107)
Q Consensus 54 ~n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I~ 102 (107)
+++. |+.|.++..|..++ +| -+|++||+.|+.+...|...++
T Consensus 790 l~~~-Lp~y~~P~~~~~~~-~l-----P~t~~GKidr~~L~~~~~~~~~ 831 (1389)
T TIGR03443 790 LKKK-LPSYAIPTVIVPLK-KL-----PLNPNGKVDKPALPFPDTAQLA 831 (1389)
T ss_pred HHhh-CCcccCCceEEEcc-cC-----CCCCCccccHhhcCCCchhhhh
Confidence 4555 99999998887774 45 5899999999998655544443
No 46
>PLN03051 acyl-activating enzyme; Provisional
Probab=91.14 E-value=1.3 Score=34.12 Aligned_cols=37 Identities=11% Similarity=0.292 Sum_probs=28.1
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
++.+-++..|.+++ .+ -+|++||+.|+.+.+.+...+
T Consensus 457 l~~~~~~~~i~~v~-~l-----P~t~~GKi~r~~L~~~~~~~~ 493 (499)
T PLN03051 457 LNPLFKVSRVKIVP-EL-----PRNASNKLLRRVLRDQLKKEL 493 (499)
T ss_pred cCCccCCceEEEcC-CC-----CCCCCccHHHHHHHHHHHHhh
Confidence 77766777777774 34 489999999999987766543
No 47
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=91.06 E-value=1.4 Score=33.36 Aligned_cols=35 Identities=9% Similarity=0.230 Sum_probs=29.5
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.+..+..|..+.+ | ..|++||+.|..+.+.|.+
T Consensus 485 l~~~~~p~~i~~v~~-~-----P~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 485 LAKFKLPKRIAFVDE-L-----PRTSVGKILKRVLREQYAE 519 (521)
T ss_pred ccCCCCceEEEEccC-C-----CCCCCCCeeHHHHHHHHhc
Confidence 788889998888753 4 5899999999999988864
No 48
>PRK06060 acyl-CoA synthetase; Validated
Probab=90.83 E-value=1 Score=36.26 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=28.9
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
|+.|..+..|.++++ + -.|++||+.|+.+.+.|.
T Consensus 458 L~~~~~P~~i~~v~~-i-----P~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 458 LSAFKVPHRFAVVDR-L-----PRTPNGKLVRGALRKQSP 491 (705)
T ss_pred CCCCcCCcEEEEeec-C-----CCCcchhhHHHHHHhhcc
Confidence 899999999998853 3 589999999999987663
No 49
>PRK08315 AMP-binding domain protein; Validated
Probab=90.80 E-value=1.6 Score=33.76 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=30.6
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
++.|+.+..+.++++ + .+|++||+.|..+.+.+....
T Consensus 517 l~~~~~P~~i~~v~~-l-----P~t~~GK~~r~~L~~~~~~~~ 553 (559)
T PRK08315 517 IAHYKIPRYIRFVDE-F-----PMTVTGKIQKFKMREMMIEEL 553 (559)
T ss_pred cccccCCcEEEEccc-C-----CCCCCCceeHHHHHHHHHhhh
Confidence 889999999998854 3 489999999999988876654
No 50
>PLN02654 acetate-CoA ligase
Probab=90.74 E-value=1.5 Score=35.19 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=29.3
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
|+.+..++.|.++++ + -.|++||+.|+.+.+.+..
T Consensus 606 L~~~~~P~~i~~v~~-l-----P~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 606 IGAFAAPDKIHWAPG-L-----PKTRSGKIMRRILRKIASR 640 (666)
T ss_pred CCCCcCCCEEEECCC-C-----CCCCCcCchHHHHHHHHcC
Confidence 899999999998854 3 5899999999999877643
No 51
>PRK09274 peptide synthase; Provisional
Probab=90.52 E-value=1.5 Score=33.91 Aligned_cols=48 Identities=13% Similarity=0.148 Sum_probs=31.3
Q ss_pred HHHHHHHHhhhCCCCCcceeeEEEecCCCCCCCCccc--ccCCCchHHHHHHHHHHH
Q psy2837 47 TQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELG--PTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 47 i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng~lT--~t~KlkR~~v~~~y~~~I 101 (107)
+.+.+.+.... ++.+..++.|.++++ | -+| ++||+.|+.+.+.+...+
T Consensus 501 l~~~l~~~l~~-~~~~~~~~~~~~~~~-l-----P~t~~~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 501 LYQELRALAAA-HPHTAGIERFLIHPS-F-----PVDIRHNAKIFREKLAVWAAKQL 550 (552)
T ss_pred HhhhhHHHHHh-cCCCcceeEEeccCC-C-----CccccccccccHHHHHHHHHHhh
Confidence 34444444333 455677788887754 5 344 799999999988766543
No 52
>PRK06178 acyl-CoA synthetase; Validated
Probab=90.04 E-value=1.9 Score=33.57 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=26.3
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.|..+. +.++++ + ..|++||+.|+.+.+.+++
T Consensus 532 l~~~~~p~-i~~v~~-i-----P~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 532 MAVYKVPE-IRIVDA-L-----PMTATGKVRKQDLQALAEE 565 (567)
T ss_pred CcccCCce-EEEecc-C-----CCCCccceeHHHHHHHHHh
Confidence 78888885 666532 2 5899999999999887765
No 53
>PRK12583 acyl-CoA synthetase; Provisional
Probab=89.93 E-value=0.67 Score=35.75 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=31.2
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
.|+.+..+..|.+++ .+ ..|++||++|+.+.+.+.+.+
T Consensus 517 ~L~~~~~P~~i~~v~-~l-----P~t~sGK~~r~~L~~~~~~~~ 554 (558)
T PRK12583 517 RIAHFKVPRYFRFVD-EF-----PMTVTGKVQKFRMREISIEEL 554 (558)
T ss_pred hcccCcCCcEEEEec-cC-----CCCCCCCccHHHHHHHHHhhc
Confidence 388999999998875 33 599999999999998876654
No 54
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=89.76 E-value=1.8 Score=33.48 Aligned_cols=35 Identities=11% Similarity=0.154 Sum_probs=29.6
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.+..+..|.+++ .+ -.|++||+.|+.+.+.|.+
T Consensus 500 l~~~~~P~~i~~v~-~i-----P~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 500 IAKWWMPDDVAFVD-AI-----PHTATGKILKTALREQFKD 534 (542)
T ss_pred CccccCCcEEEEec-cC-----CCCCcchhhHHHHHHHHhc
Confidence 88899999999885 34 4899999999999887765
No 55
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=89.65 E-value=1.9 Score=33.40 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=31.0
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
.++.|..+..|..+++ + .+|++||+.|+.+.+.++...
T Consensus 497 ~l~~~~~P~~~~~~~~-i-----P~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 497 GIAEFKLPDRVECVDS-L-----PLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred CccccccCcEEEEecc-C-----CCCCCCcccHHHHHHHHHhhc
Confidence 3889999999998853 3 589999999999988876543
No 56
>PRK13382 acyl-CoA synthetase; Provisional
Probab=89.56 E-value=1.3 Score=34.23 Aligned_cols=31 Identities=19% Similarity=0.178 Sum_probs=25.3
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 95 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~ 95 (107)
++.|..+..+.++.+ + -+|++||+.|+.+.+
T Consensus 506 l~~~~~P~~i~~v~~-l-----P~t~~gK~~r~~L~~ 536 (537)
T PRK13382 506 LANYKVPRDIVVLDE-L-----PRGATGKILRRELQA 536 (537)
T ss_pred ccCCCCCcEEEEecc-C-----CCCCCCCCcHHhhCC
Confidence 889999999988843 3 589999999998743
No 57
>PLN03102 acyl-activating enzyme; Provisional
Probab=89.54 E-value=1.1 Score=35.19 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=33.0
Q ss_pred HhhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 54 ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 54 ~n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
++.. |+.|..+..|.+++ .| -+|++||+.|+.+.+...+.+
T Consensus 516 ~~~~-L~~~~~P~~i~~~~-~~-----P~t~~gKi~r~~L~~~~~~~~ 556 (579)
T PLN03102 516 CREN-LPHFMCPRKVVFLQ-EL-----PKNGNGKILKPKLRDIAKGLV 556 (579)
T ss_pred HHhh-cccccCCeEEEEcc-cC-----CCCCcccccHHHHHHHHHHhh
Confidence 3454 89999999999884 34 589999999999988876644
No 58
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=89.53 E-value=0.98 Score=34.95 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=32.2
Q ss_pred hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHH
Q psy2837 55 NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 100 (107)
Q Consensus 55 n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~ 100 (107)
++. ++.|.++..|.++++ + ..|++||+.|+.+.+.|.+.
T Consensus 487 ~~~-l~~~~~P~~i~~v~~-i-----P~t~~GKv~r~~L~~~~~~~ 525 (542)
T PRK07786 487 TDR-LARYKHPKALEIVDA-L-----PRNPAGKVLKTELRERYGAC 525 (542)
T ss_pred Hhh-ccCCCCCCEEEEecc-C-----CCCCcccccHHHHHHHHHhh
Confidence 444 889999999988853 3 48999999999999998864
No 59
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=89.47 E-value=2.6 Score=32.20 Aligned_cols=35 Identities=9% Similarity=0.073 Sum_probs=29.0
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.|+.+..+..+++- ..|++||+.|+.+.+.|..
T Consensus 469 l~~~~~P~~i~~~~~i------P~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 469 LAGYKVPKHIEIMAEL------PREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred cccCCCCcEEEEeccC------CCCCccchhHHHHHHHHHh
Confidence 8889999988887543 4889999999999887764
No 60
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=89.25 E-value=2.1 Score=33.11 Aligned_cols=35 Identities=9% Similarity=0.107 Sum_probs=28.5
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
.++.|..++++.++++ + -.|++||+.|+.+.+.+.
T Consensus 509 ~l~~~~~P~~i~~v~~-l-----P~t~sgK~~r~~L~~~~~ 543 (547)
T PRK13295 509 KVAKQYIPERLVVRDA-L-----PRTPSGKIQKFRLREMLR 543 (547)
T ss_pred cCccccCCcEEEEecc-C-----CCCCCccccHHHHHHHHh
Confidence 4889999999998853 3 489999999999977654
No 61
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=89.11 E-value=2.3 Score=33.08 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=27.6
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
++.+..+..|.++++ + .+|++||+.|+.+.+.+
T Consensus 490 l~~~~~P~~i~~~~~-i-----P~t~~GKi~r~~l~~~~ 522 (542)
T PRK06155 490 LAYFAVPRYVEFVAA-L-----PKTENGKVQKFVLREQG 522 (542)
T ss_pred CcCccCCcEEEEecc-C-----CCCcccceeHHHHHhhc
Confidence 889999999988743 3 58999999999997754
No 62
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=88.55 E-value=2.2 Score=33.96 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=33.3
Q ss_pred HHHHHHHH-hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 47 TQAAIDRA-NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 47 i~~~l~~~-n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
+.++|.+. .+. +.++..++.+.++++-+ -|.||||.|..+.+...
T Consensus 476 L~~ei~~~vr~~-~~~~~~p~~i~fv~~LP------kT~sGKI~R~~lr~~~~ 521 (528)
T COG0365 476 LAEEIRRHVARN-IGPHAIPRKIRFVDELP------KTASGKIQRRLLRKILH 521 (528)
T ss_pred HHHHHHHHHHhc-cCcccCCceEEEecCCC------CCCcccHHHHHHHHHHh
Confidence 44444443 233 55699999999997664 79999999999998776
No 63
>PRK05850 acyl-CoA synthetase; Validated
Probab=88.27 E-value=2.8 Score=32.65 Aligned_cols=31 Identities=13% Similarity=0.391 Sum_probs=23.6
Q ss_pred ceeeEEEec-CCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 64 KIQKFEFLP-ADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 64 ~i~~~~l~~-~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++..+.+++ +.+ -+|++||+.|+.+.+.|.+
T Consensus 537 ~~~~~~~~~~~~i-----P~t~~GKi~R~~l~~~~~~ 568 (578)
T PRK05850 537 SVADLVLVAPGSI-----PITTSGKIRRAACVEQYRQ 568 (578)
T ss_pred CceEEEEeCCCCc-----CCCCCchHHHHHHHHHHHc
Confidence 455666664 233 4999999999999999876
No 64
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=87.97 E-value=1.8 Score=33.37 Aligned_cols=39 Identities=5% Similarity=0.086 Sum_probs=33.1
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 102 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I~ 102 (107)
.++.+..+..|.++++ + ..|++||+.|+.+.+.+.+.+.
T Consensus 501 ~l~~~~~P~~i~~v~~-i-----P~t~sGK~~r~~l~~~~~~~~~ 539 (547)
T PRK06087 501 RVAKYKYPEHIVVIDK-L-----PRTASGKIQKFLLRKDIMRRLT 539 (547)
T ss_pred cccccCCCeEEEEecc-C-----CCCCCCcCcHHHHHHHHHHHhh
Confidence 4899999999999863 3 5899999999999988887764
No 65
>PRK07798 acyl-CoA synthetase; Validated
Probab=87.91 E-value=2.3 Score=32.37 Aligned_cols=32 Identities=9% Similarity=0.166 Sum_probs=26.2
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 96 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~ 96 (107)
++.|+++..+..+++ + ..|++||+.|+.+.+.
T Consensus 498 l~~~~~P~~i~~~~~-i-----P~t~~GK~~~~~~~~~ 529 (533)
T PRK07798 498 LAGYKVPRAIWFVDE-V-----QRSPAGKADYRWAKEQ 529 (533)
T ss_pred cccCCCCeEEEEccc-C-----CCCCcchhhHHHHhhh
Confidence 889999998888753 3 5899999999988654
No 66
>PRK12316 peptide synthase; Provisional
Probab=87.83 E-value=0.99 Score=44.24 Aligned_cols=63 Identities=16% Similarity=0.164 Sum_probs=41.8
Q ss_pred ccCCCCceEEEEeecccCCcCCCCCCccchHHHHHHHHhcChHHHHHHHHHHHhhhCCCCCcceeeEEEecCCCCCCCCc
Q psy2837 2 GSDKKKFLSMLLALRTKMNADTGEPLDELETDTKDWLKSLGVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGE 81 (107)
Q Consensus 2 ~G~~~~~l~alv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng~ 81 (107)
++....+++|+|+++... . ...+.+.+.+. + .|+.|..+..|..+++ + -
T Consensus 3478 ~~~~~~~l~a~vv~~~~~--~-------------------~~~~~l~~~l~---~-~Lp~ymvP~~~~~~~~-l-----P 3526 (5163)
T PRK12316 3478 LAVDGRQLVAYVVPEDEA--G-------------------DLREALKAHLK---A-SLPEYMVPAHLLFLER-M-----P 3526 (5163)
T ss_pred EEccCCeEEEEEEcCCcC--c-------------------ccHHHHHHHHH---h-hCCcccCcceeeeHhh-c-----C
Confidence 344467899999986421 0 01223333333 3 3999999999988753 3 4
Q ss_pred ccccCCCchHHHHH
Q psy2837 82 LGPTMKVKRPFVVK 95 (107)
Q Consensus 82 lT~t~KlkR~~v~~ 95 (107)
+|++||+.|+.+.+
T Consensus 3527 ~t~~GKvdr~~L~~ 3540 (5163)
T PRK12316 3527 LTPNGKLDRKALPR 3540 (5163)
T ss_pred CCCCcchhHHhcCC
Confidence 99999999998754
No 67
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=87.74 E-value=2.2 Score=32.27 Aligned_cols=34 Identities=9% Similarity=0.089 Sum_probs=24.2
Q ss_pred HHHHHH-hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCc
Q psy2837 49 AAIDRA-NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVK 89 (107)
Q Consensus 49 ~~l~~~-n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~Klk 89 (107)
++|.+. .+. ++.|+++..|.++++- -.|++||++
T Consensus 352 ~~l~~~~~~~-L~~~~~P~~i~~~~~l------P~t~~GKi~ 386 (386)
T TIGR02372 352 IELRATAARH-LPAPARPDRFRFGTEL------PRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHh-CCCCCCCcEEEEcccC------CCCCCCCcC
Confidence 344443 343 8999999999987544 478899875
No 68
>PRK05857 acyl-CoA synthetase; Validated
Probab=87.66 E-value=1.3 Score=34.36 Aligned_cols=46 Identities=9% Similarity=0.023 Sum_probs=34.4
Q ss_pred HHHHHHHH-hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 47 TQAAIDRA-NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 47 i~~~l~~~-n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
+.+.+.+. .+. ++.|.+++.|.++++ + -.|++||+.|+.+.+....
T Consensus 485 l~~~~~~~~~~~-l~~~~~P~~v~~~~~-i-----P~t~~GKi~r~~l~~~~~~ 531 (540)
T PRK05857 485 LKHTIAARFRRE-SEPMARPSTIVIVTD-I-----PRTQSGKVMRASLAAAATA 531 (540)
T ss_pred HHHHHHHHHHhh-hccccCCeEEEEhhc-C-----CCCCCcceeHHHHHHhhhh
Confidence 44444443 344 889999999999853 3 6899999999999877654
No 69
>PRK07638 acyl-CoA synthetase; Validated
Probab=87.58 E-value=0.92 Score=34.45 Aligned_cols=41 Identities=15% Similarity=0.179 Sum_probs=30.5
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHHHhhh
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 105 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I~~ly 105 (107)
.++.|++++.+.++++ + -.|++||+.|+.+.+.+. .++..|
T Consensus 446 ~l~~~~~p~~i~~v~~-i-----P~t~~GKv~r~~L~~~~~-~~~~~~ 486 (487)
T PRK07638 446 RLSSFKIPKEWHFVDE-I-----PYTNSGKIARMEAKSWIE-NQEKIY 486 (487)
T ss_pred HhhcccCCcEEEEecc-c-----CCCCcccccHHHHHHHHh-cccccc
Confidence 3888999999998854 3 489999999999865544 344443
No 70
>PRK06145 acyl-CoA synthetase; Validated
Probab=87.54 E-value=3.5 Score=31.31 Aligned_cols=33 Identities=9% Similarity=0.167 Sum_probs=26.7
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
++.++.+..+..+.+ + -+|++||+.|+.+.+..
T Consensus 463 l~~~~~p~~i~~v~~-i-----P~t~~GKi~r~~l~~~~ 495 (497)
T PRK06145 463 LASFKVPRQLKVRDE-L-----PRNPSGKVLKRVLRDEL 495 (497)
T ss_pred hhcCCCCCEEEEecc-C-----CCCCcccccHHHHHHHh
Confidence 788989988888743 3 58999999999987754
No 71
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=86.86 E-value=2.8 Score=31.84 Aligned_cols=31 Identities=13% Similarity=0.065 Sum_probs=26.0
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 95 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~ 95 (107)
++.++.+..+.++++ + ..|++||+.|+++.+
T Consensus 484 l~~~~~p~~i~~v~~-i-----P~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 484 LPNYMVPALIHVRQA-L-----PRNANGKIDRKALAA 514 (515)
T ss_pred CccccCCCEEEEecc-C-----CCCCCCCCcHHHhcc
Confidence 889999999998855 4 589999999998753
No 72
>PRK08162 acyl-CoA synthetase; Validated
Probab=86.49 E-value=5.1 Score=30.87 Aligned_cols=36 Identities=11% Similarity=0.122 Sum_probs=28.3
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
++.+..++.+.+. ++ -+|++||+.|..+.+.+..+-
T Consensus 506 l~~~~~P~~~~~~--~i-----P~t~~gK~~r~~l~~~~~~l~ 541 (545)
T PRK08162 506 LAGFKVPKAVVFG--EL-----PKTSTGKIQKFVLREQAKSLK 541 (545)
T ss_pred cccccCCcEEEec--cc-----CCCCCcCCcHHHHHHHHhhhh
Confidence 8899999988652 33 479999999999988776543
No 73
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=86.42 E-value=1.4 Score=34.33 Aligned_cols=36 Identities=8% Similarity=0.092 Sum_probs=30.5
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
.|+.|..++.|.++++ + -.|++||+.|+.+.+.+++
T Consensus 522 ~L~~~~~P~~i~~v~~-~-----P~t~~GKv~r~~L~~~~~~ 557 (576)
T PRK05620 522 RLPNWMLPEYWTFVDE-I-----DKTSVGKFDKKDLRQHLAD 557 (576)
T ss_pred hCccccCCeEEEEecc-C-----CCCCcccCcHHHHHHHHhc
Confidence 3899999999998854 3 5899999999999888874
No 74
>PRK07868 acyl-CoA synthetase; Validated
Probab=86.18 E-value=3 Score=35.40 Aligned_cols=32 Identities=9% Similarity=0.092 Sum_probs=26.9
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 96 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~ 96 (107)
++.|..++.|.++++ | -+|++||+.|+++.++
T Consensus 924 l~~y~vP~~i~~v~~-l-----P~T~sGKi~r~~L~~~ 955 (994)
T PRK07868 924 LPVGLGPDIVHVVPE-I-----PLSATYRPTVSALRAA 955 (994)
T ss_pred CCCCcCCeEEEEeCC-C-----CCCccccEehHHHHhc
Confidence 789999999999864 4 5899999999998643
No 75
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=86.08 E-value=1.1 Score=35.08 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=29.4
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
|+.|..++.+.++++ + .+|++||++|+.+.+.+.+
T Consensus 530 L~~~~~P~~i~~v~~-l-----P~t~~GKi~r~~L~~~~~~ 564 (600)
T PRK08279 530 LPAYAVPLFVRLVPE-L-----ETTGTFKYRKVDLRKEGFD 564 (600)
T ss_pred CccccCCeEEEeecC-C-----CCCcchhhhHHHHhhcCCC
Confidence 899999999999854 3 6999999999999775543
No 76
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=86.00 E-value=1.9 Score=34.15 Aligned_cols=43 Identities=9% Similarity=0.071 Sum_probs=31.9
Q ss_pred HHHHHHH-hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 48 QAAIDRA-NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 48 ~~~l~~~-n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
.++|.+. .+. ++.|..+..|.+++ .+ ..|++||+.|+.+.+.+
T Consensus 560 ~~~i~~~~~~~-l~~~~~P~~i~~v~-~l-----P~T~sGKi~R~~L~~~~ 603 (629)
T PRK10524 560 EKEIMALVDSQ-LGAVARPARVWFVS-AL-----PKTRSGKLLRRAIQAIA 603 (629)
T ss_pred HHHHHHHHHhh-cCCCcCCCEEEEcC-CC-----CCCCCcchHHHHHHHHH
Confidence 3344443 343 88999999998885 34 58999999999998765
No 77
>PRK13390 acyl-CoA synthetase; Provisional
Probab=85.78 E-value=3 Score=31.78 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=26.1
Q ss_pred hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHH
Q psy2837 55 NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFV 93 (107)
Q Consensus 55 n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v 93 (107)
... |+.|..+..|.++++ + -.|++||+.|+.+
T Consensus 469 ~~~-l~~~~~P~~~~~~~~-i-----P~t~~GKi~r~~L 500 (501)
T PRK13390 469 RSR-IAHYKAPRSVEFVDE-L-----PRTPTGKLVKGLL 500 (501)
T ss_pred HHh-cccCCCCcEEEEecc-C-----CCCCccceehhhc
Confidence 344 899999999999854 3 4899999999875
No 78
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=85.73 E-value=0.92 Score=25.80 Aligned_cols=24 Identities=17% Similarity=0.148 Sum_probs=16.3
Q ss_pred CCCCcce--eeEEEecCCCCCCCCcccccCC
Q psy2837 59 ISNAQKI--QKFEFLPADFSIPTGELGPTMK 87 (107)
Q Consensus 59 l~~~e~i--~~~~l~~~~ft~eng~lT~t~K 87 (107)
+++|..+ ..|..++++| -+|+|||
T Consensus 48 l~~~~~P~~~~~v~~~~~l-----P~t~~GK 73 (73)
T PF13193_consen 48 LPPYMVPRRIRFVRLDEEL-----PRTPSGK 73 (73)
T ss_dssp S-GGGS-SEEEEEEESSSE-----EBETTSS
T ss_pred CCCcceeeEEEEccccCcC-----CCCCCCC
Confidence 8999999 5555556666 6888887
No 79
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=85.73 E-value=1.4 Score=33.29 Aligned_cols=38 Identities=16% Similarity=0.229 Sum_probs=30.4
Q ss_pred hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 55 NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 55 n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
+.+ ++.|.++.++..+++.+ .|++||+.|+.+.+-.+.
T Consensus 416 ~~~-l~~~~~P~~~~~~~~~p------~t~~gKi~r~~L~~~~~~ 453 (458)
T PRK09029 416 QDK-LARFQQPVAYYLLPPEL------KNGGIKISRQALKEWVAQ 453 (458)
T ss_pred Hhh-chhccCCeEEEEecccc------cCcCCCcCHHHHHHHHHh
Confidence 444 89999999999886543 899999999998765553
No 80
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=85.68 E-value=2.3 Score=32.74 Aligned_cols=35 Identities=9% Similarity=0.070 Sum_probs=28.4
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
.++.|..++.+.++++ + -.|++||+.|+.+.+.-.
T Consensus 507 ~l~~~~~P~~~~~v~~-i-----P~t~~GKv~r~~L~~~~~ 541 (546)
T PRK08314 507 HMAAYKYPRIVEFVDS-L-----PKSGSGKILWRQLQEQEK 541 (546)
T ss_pred hcccCCCCcEEEEecC-C-----CCCCccceeHHHHHHHHh
Confidence 3899999999999864 3 489999999999876443
No 81
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=85.07 E-value=1.6 Score=34.68 Aligned_cols=42 Identities=10% Similarity=0.022 Sum_probs=32.1
Q ss_pred HHHHHH-hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 49 AAIDRA-NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 49 ~~l~~~-n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
++|.+. .+. |+.|..++.+.++++- -.|++||+.|+.+.+.+
T Consensus 560 ~~i~~~~~~~-L~~~~~P~~v~~v~~l------P~t~sGKi~r~~L~~~~ 602 (628)
T TIGR02316 560 TGMMDCVVRQ-LGAVARPARVYFVAAL------PKTRSGKLLRRSIQALA 602 (628)
T ss_pred HHHHHHHHHh-cCCCcCCCEEEEcCCC------CCCCchHHHHHHHHHHH
Confidence 344443 444 8999999999998653 48999999999997765
No 82
>PRK07867 acyl-CoA synthetase; Validated
Probab=85.06 E-value=4.7 Score=31.28 Aligned_cols=34 Identities=12% Similarity=0.007 Sum_probs=27.8
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
.++.+..+..|.++++ + -.|++||+.|+.+.+..
T Consensus 472 ~l~~~~~P~~i~~~~~-i-----P~t~~GKv~r~~L~~~~ 505 (529)
T PRK07867 472 DLGPKQWPSYVRVCAE-L-----PRTATFKVLKRQLSAEG 505 (529)
T ss_pred cCCcccCCeEEEEeec-c-----CCCCCcceeHHHHHHhc
Confidence 3889999999988844 3 58999999999987654
No 83
>PRK07529 AMP-binding domain protein; Validated
Probab=84.99 E-value=6.9 Score=31.18 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=26.8
Q ss_pred CCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHH
Q psy2837 61 NAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 100 (107)
Q Consensus 61 ~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~ 100 (107)
.+..++.|.++++ + -+|++||+.|+.+.+.+...
T Consensus 538 ~~~~P~~i~~v~~-l-----P~t~~GKi~r~~Lr~~~~~~ 571 (632)
T PRK07529 538 RAAVPKHVRILDA-L-----PKTAVGKIFKPALRRDAIRR 571 (632)
T ss_pred hccCCcEEEEecC-C-----CCCCCCcccHHHHHHHHHHH
Confidence 4678888998854 4 58999999999988776653
No 84
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=84.49 E-value=2.4 Score=32.82 Aligned_cols=36 Identities=11% Similarity=0.126 Sum_probs=29.9
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 100 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~ 100 (107)
++.|..++.|.++++ + -.|++||+.|+.+.+.+.+.
T Consensus 499 l~~~~~P~~i~~v~~-l-----P~t~sgKi~r~~l~~~~~~~ 534 (539)
T PRK07008 499 VAKWWIPDDVVFVDA-I-----PHTATGKLQKLKLREQFRDY 534 (539)
T ss_pred cccccCCeEEEEecC-C-----CCCCccceeHHHHHHHHHhh
Confidence 889999999988754 3 48999999999998877653
No 85
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=84.47 E-value=2 Score=33.44 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=28.5
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
++.|..++.|.++++ + -+|++||+.|+.+.+.+.
T Consensus 523 l~~~~~P~~i~~v~~-i-----P~t~sGKi~r~~L~~~~~ 556 (562)
T PRK05677 523 LTGYKVPKAVEFRDE-L-----PTTNVGKILRRELRDEEL 556 (562)
T ss_pred hhhccCCcEEEEecc-C-----CCCCcccccHHHHHHHHH
Confidence 889999999998854 3 689999999999976554
No 86
>PRK07787 acyl-CoA synthetase; Validated
Probab=83.36 E-value=4.6 Score=30.58 Aligned_cols=31 Identities=13% Similarity=0.198 Sum_probs=25.2
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 95 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~ 95 (107)
++.+..+..+.+++ ++ -+|++||+.|+.+.+
T Consensus 439 l~~~~~P~~i~~~~-~i-----P~~~~GKi~r~~L~~ 469 (471)
T PRK07787 439 LSVHKRPREVRFVD-AL-----PRNAMGKVLKKQLLS 469 (471)
T ss_pred cccccCCcEEEEec-cC-----CCCCCccccHHHhcc
Confidence 88899999888874 34 489999999998743
No 87
>KOG1177|consensus
Probab=83.35 E-value=2.5 Score=33.70 Aligned_cols=49 Identities=14% Similarity=0.172 Sum_probs=39.5
Q ss_pred HHHHHHHHhhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 47 TQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 47 i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
..+.|.+..++++..|-.++.|.+.++ | -+|-||||++-.|.+-.+..+
T Consensus 541 t~E~lKa~Ck~klaHFKiPky~vf~~~-F-----PlT~tGKIqKFeir~~~k~~l 589 (596)
T KOG1177|consen 541 TAETLKAMCKGKLAHFKIPKYFVFVDE-F-----PLTTTGKIQKFEIREMSKGHL 589 (596)
T ss_pred cHHHHHHHHhcccccccCCcEEEEecc-C-----cccccccchhHHHHHHHHhhc
Confidence 556666765556889999999998876 7 699999999999998887554
No 88
>PRK13388 acyl-CoA synthetase; Provisional
Probab=83.03 E-value=5 Score=31.16 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=27.2
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
.++.+..+..+.+++ .+ -+|++||+.|+.+.+..
T Consensus 471 ~l~~~~~P~~~~~v~-~i-----P~t~~GKv~R~~L~~~~ 504 (540)
T PRK13388 471 DLGTKAWPRYVRIAA-DL-----PSTATNKVLKRELIAQG 504 (540)
T ss_pred cCCcccCCcEEEEec-cC-----CCCCcceeeHHhHHHhc
Confidence 388899999888874 33 58999999999987654
No 89
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=82.48 E-value=2.6 Score=32.96 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=30.4
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.|..++.+.++++- -.|++||+.|+.+.+.|.+
T Consensus 493 l~~~~~P~~v~~v~~l------P~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 493 LALYKVPRIVVFVDEL------PRTASGKIDRRALREEYRA 527 (534)
T ss_pred hhcccCCeEEEEeCCC------CCCCchhhhHHHHHHHHHh
Confidence 7889999999988433 5899999999999999987
No 90
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=81.13 E-value=5.6 Score=34.17 Aligned_cols=32 Identities=13% Similarity=0.023 Sum_probs=25.4
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 95 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~ 95 (107)
.++.|..+..|..++ .+ -+|++||+.|+.+..
T Consensus 932 ~Lp~~~~P~~~~~~~-~l-----P~t~~GKidr~~L~~ 963 (1296)
T PRK10252 932 RLPPHMVPVVLLQLD-QL-----PLSANGKLDRKALPL 963 (1296)
T ss_pred hCchhcCCcEEEEec-CC-----CCCCCcChhHHhcCC
Confidence 389999999888875 34 589999999988743
No 91
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=80.55 E-value=4 Score=33.03 Aligned_cols=35 Identities=9% Similarity=0.018 Sum_probs=29.2
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
.++.|..++.|.++++ + -+|++||+.|+.+.+.+.
T Consensus 678 ~l~~~~vP~~i~~v~~-l-----P~t~~GKi~r~~L~~~~~ 712 (718)
T PRK08043 678 GVPELAVPRDIRYLKQ-L-----PLLGSGKPDFVTLKSMVD 712 (718)
T ss_pred CCCcccCCceEEEecc-c-----CcCCCCCcCHHHHHHHHh
Confidence 4899999999999864 3 589999999999976654
No 92
>PRK09188 serine/threonine protein kinase; Provisional
Probab=80.42 E-value=2.3 Score=32.18 Aligned_cols=32 Identities=6% Similarity=-0.027 Sum_probs=25.9
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
++. ..++.|.++++ | -+|++||+.|+.+....
T Consensus 295 L~~-kvP~~v~~v~~-l-----P~t~~GKi~R~~Lr~~~ 326 (365)
T PRK09188 295 KPP-KPPEHIQPVAA-L-----PRDADGTVRDDILRLIA 326 (365)
T ss_pred chh-cCCcEEEEECC-C-----CCCCCCCccHHHHHHHh
Confidence 788 88899988854 4 48999999999887654
No 93
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=79.24 E-value=1.6 Score=33.32 Aligned_cols=40 Identities=10% Similarity=-0.007 Sum_probs=28.3
Q ss_pred HHHHHHhhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHH
Q psy2837 49 AAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVV 94 (107)
Q Consensus 49 ~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~ 94 (107)
+.|.+.....++.++.+..+..+++- ..|++||++|..+.
T Consensus 467 ~~i~~~~~~~l~~~~~p~~i~~~~~i------P~t~~gKi~r~~l~ 506 (508)
T TIGR02262 467 TELKEHVKDRLAPYKYPRWIVFVDDL------PKTATGKIQRFKLR 506 (508)
T ss_pred HHHHHHHHHhcccCCCCceEEEecCC------CCCCCCcEehhhcc
Confidence 34444322238899999888887543 58999999998764
No 94
>KOG1175|consensus
Probab=78.80 E-value=8.8 Score=31.36 Aligned_cols=46 Identities=13% Similarity=-0.012 Sum_probs=33.3
Q ss_pred HHHHHHHHHhhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHH
Q psy2837 46 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 46 ~i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y 97 (107)
.+.++|.+.=+..+.+|..++.+...++-. -|.+||+.|+.+.+.=
T Consensus 555 ~L~kel~~~VR~~igp~a~P~~I~~v~~LP------kTrSGKimRr~lrki~ 600 (626)
T KOG1175|consen 555 QLTKELVKHVRSVIGPYAVPRLIVFVPGLP------KTRSGKIMRRALRKIA 600 (626)
T ss_pred HHHHHHHHHHHhhcCcccccceeEecCCCC------ccccchhHHHHHHHHh
Confidence 344444443222488999999999987664 6999999999997753
No 95
>PRK12467 peptide synthase; Provisional
Probab=78.61 E-value=1.9 Score=41.61 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=28.7
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
|+.|..+..|..+++ + -+|++||+.|+.+.+.+..
T Consensus 984 Lp~y~vP~~~~~l~~-l-----P~t~~GKidR~~L~~~~~~ 1018 (3956)
T PRK12467 984 LPDYMVPAHLLLLDS-L-----PLTPNGKLDRKALPKPDAS 1018 (3956)
T ss_pred CchhcCCceEeeecc-c-----CCCCCCCcCHhhcCCcccc
Confidence 899999999988754 4 5899999999998766543
No 96
>PRK13383 acyl-CoA synthetase; Provisional
Probab=78.58 E-value=11 Score=28.89 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=24.2
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFV 93 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v 93 (107)
++.|+++..|.+++ ++ ..|++||+.|+.+
T Consensus 486 l~~~~~p~~i~~v~-~i-----P~t~~gKi~r~~L 514 (516)
T PRK13383 486 VSRFEQPRDINIVS-SI-----PRNPTGKVLRKEL 514 (516)
T ss_pred cccCCCCcEEEEeC-CC-----CCCCCCcCcHHHh
Confidence 78899999999885 33 5899999999876
No 97
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=78.00 E-value=6.7 Score=30.26 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=24.5
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVV 94 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~ 94 (107)
.++.+..++.|..++ ++ -.|++||+.|+.+.
T Consensus 507 ~l~~~~~P~~i~~v~-~i-----P~t~~gKv~r~~L~ 537 (538)
T TIGR03208 507 KVALQYIPERLEVVD-AL-----PATPAGKIQKFRLR 537 (538)
T ss_pred chhhccCCcEEEEec-cC-----CCCCccccchHhhc
Confidence 377888888888875 34 48999999999874
No 98
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=77.58 E-value=6.1 Score=33.58 Aligned_cols=38 Identities=16% Similarity=-0.029 Sum_probs=31.1
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 101 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I 101 (107)
.++.|..+..|.++++ + -+|++||+.|+.+.+.+.+..
T Consensus 1097 ~l~~~~~P~~i~~v~~-l-----P~t~~GKi~r~~L~~~~~~~~ 1134 (1140)
T PRK06814 1097 GASELMVPAEIITIDE-I-----PLLGTGKIDYVAVTKLAEEAA 1134 (1140)
T ss_pred CCCcccCCcEEEEecC-c-----CCCCCCCCcHHHHHHHHHHhh
Confidence 4889999999988854 3 479999999999988776654
No 99
>PF08557 Lipid_DES: Sphingolipid Delta4-desaturase (DES); InterPro: IPR013866 Sphingolipids are important membrane signalling molecules involved in many different cellular functions in eukaryotes. Sphingolipid delta 4-desaturase catalyses the formation of (E)-sphing-4-enine []. Some proteins in this entry have bifunctional delta 4-desaturase/C-4-hydroxylase activity. Delta 4-desaturated sphingolipids may play a role in early signalling required for entry into meiotic and spermatid differentiation pathways during Drosophila spermatogenesis []. This small protein associates with FA_desaturase IPR005804 from INTERPRO and appears to be specific to sphingolipid delta 4-desaturase. ; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=77.49 E-value=1.6 Score=22.53 Aligned_cols=19 Identities=26% Similarity=0.315 Sum_probs=16.3
Q ss_pred CCchHHHHHHHHHHHHhhhc
Q psy2837 87 KVKRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 87 KlkR~~v~~~y~~~I~~ly~ 106 (107)
..||+.|.++| .+|.+||.
T Consensus 16 ~~RRk~IL~k~-PeIk~L~G 34 (39)
T PF08557_consen 16 ASRRKEILKKH-PEIKKLMG 34 (39)
T ss_pred HHHHHHHHHhC-hHHHHHhC
Confidence 36999999999 88998885
No 100
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=76.79 E-value=5.1 Score=31.11 Aligned_cols=35 Identities=11% Similarity=0.193 Sum_probs=28.4
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.+..+..|.++++ + ..|++||+.|+.+.+.+..
T Consensus 521 l~~~~~P~~~~~v~~-i-----P~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 521 LAAYKVPKVYEFRDE-L-----PKTTVGKILRRVLIEEEKR 555 (563)
T ss_pred cccccCCcEEEEccc-C-----CCCccchhhHHHHHHHHhh
Confidence 888888888887754 3 4799999999999887764
No 101
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=75.55 E-value=7.8 Score=32.73 Aligned_cols=37 Identities=14% Similarity=0.028 Sum_probs=29.6
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 100 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~ 100 (107)
.++.|..+..+..+++ + -.|++||+.|+.+.+..+..
T Consensus 1108 ~l~~~~~P~~i~~~~~-i-----P~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1108 GLPNLWKPSRYFKVEA-L-----PLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred CCCcccCCcEEEEecC-c-----CCCCCCCCcHHHHHHHHHHh
Confidence 4899999999888864 3 48999999999997765543
No 102
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=75.39 E-value=5.1 Score=31.07 Aligned_cols=38 Identities=13% Similarity=0.125 Sum_probs=30.7
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 102 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~~I~ 102 (107)
++.++.+..+..+.+ + ..|++||+.|+.+.+...+.++
T Consensus 521 l~~~~~P~~~~~~~~-l-----P~t~~GK~~r~~l~~~~~~~~~ 558 (560)
T PRK08974 521 LTGYKVPKLVEFRDE-L-----PKSNVGKILRRELRDEARAKVD 558 (560)
T ss_pred cccccCCcEEEEhhh-C-----CCCCCCcEeHHHHHHHHHhhhc
Confidence 888999998888643 3 4899999999999988776543
No 103
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=75.38 E-value=11 Score=28.70 Aligned_cols=29 Identities=7% Similarity=0.008 Sum_probs=23.8
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFV 93 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v 93 (107)
++.|..+..+.++++ + .+|+++|+.|+.+
T Consensus 488 l~~~~~P~~~~~v~~-i-----P~t~~gK~~r~~l 516 (517)
T PRK08008 488 MAKFKVPSYLEIRKD-L-----PRNCSGKIIKKNL 516 (517)
T ss_pred cccccCCcEEEEecc-C-----CCCCccceehhhc
Confidence 788999998888753 3 5899999999875
No 104
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=75.35 E-value=5.5 Score=30.63 Aligned_cols=30 Identities=13% Similarity=0.300 Sum_probs=24.9
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFV 93 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v 93 (107)
.++.|..+..|.++++ + .+|++||+.|+.+
T Consensus 497 ~l~~~~~P~~i~~v~~-i-----P~t~sGKv~r~~L 526 (527)
T TIGR02275 497 GLAEYKLPDRVEFIDS-L-----PLTAVGKIDKKAL 526 (527)
T ss_pred CCccccCCCEEEEecc-C-----CCCCccceeHHhc
Confidence 4889999999998853 3 6899999999875
No 105
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=74.91 E-value=4.7 Score=31.39 Aligned_cols=32 Identities=9% Similarity=0.126 Sum_probs=25.9
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 95 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~ 95 (107)
.++.|..+..+.++++ | -+|++||+.|+.+.+
T Consensus 529 ~l~~~~~P~~i~~~~~-~-----P~t~~GK~~r~~L~~ 560 (562)
T PRK12492 529 NFTGYKVPKHIVLRDS-L-----PMTPVGKILRRELRD 560 (562)
T ss_pred hcccccCCcEEEEecc-C-----CCCCCCceeHHHHHh
Confidence 3889999999888743 4 589999999998754
No 106
>PRK09192 acyl-CoA synthetase; Validated
Probab=74.10 E-value=15 Score=28.79 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=24.2
Q ss_pred CcceeeEEEec-CCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 62 AQKIQKFEFLP-ADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 62 ~e~i~~~~l~~-~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
+..+..+.+++ ++| -.|++||+.|+.+.+.|..
T Consensus 533 ~~~~~~i~~~~~~~l-----P~t~~GKv~R~~l~~~~~~ 566 (579)
T PRK09192 533 FGVEAAVELVPPHSL-----PRTSSGKLSRAKAKKRYLS 566 (579)
T ss_pred hCCCceEEEeCCCCc-----CCCCCcchhHHHHHHHHHc
Confidence 33444566554 345 6899999999999998876
No 107
>PRK12467 peptide synthase; Provisional
Probab=73.28 E-value=5 Score=38.89 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=27.1
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 96 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~ 96 (107)
.|+.|..+..|..+++ | -+|++||+.|+.+.+-
T Consensus 3559 ~Lp~y~vP~~~~~l~~-l-----P~t~~GKidR~~L~~~ 3591 (3956)
T PRK12467 3559 SLPDYMVPAQLLVLAA-M-----PLGPNGKVDRKALPDP 3591 (3956)
T ss_pred cCChhhCCCeeeeecc-C-----CCCCCCccchhhcCCC
Confidence 3999999999988754 4 4899999999987653
No 108
>PRK05691 peptide synthase; Validated
Probab=72.84 E-value=9.4 Score=37.44 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=26.1
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 95 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~ 95 (107)
.||+|-.+..|..++ .| -+|++||+.|+.+.+
T Consensus 4193 ~Lp~ymvP~~~~~~~-~l-----P~t~~GKidr~~L~~ 4224 (4334)
T PRK05691 4193 ELPDYMVPLHWLWLD-RL-----PLNANGKLDRKALPA 4224 (4334)
T ss_pred hCChhhcCcceeecc-cC-----CCCCCCcccHhhcCC
Confidence 399999999988775 44 599999999998743
No 109
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=72.32 E-value=6 Score=29.98 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=25.8
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 95 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~ 95 (107)
++.+..+..+..++ .+ -+|++||+.|..+.+
T Consensus 482 l~~~~~p~~i~~v~-~i-----P~t~~gK~~r~~l~~ 512 (513)
T PRK07656 482 LAKYKVPRSIEFLD-EL-----PKNATGKVLKRALRE 512 (513)
T ss_pred cccccCCCEEEEec-CC-----CCCCccceeHHHHhc
Confidence 88999999999885 33 589999999998854
No 110
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=70.38 E-value=7.6 Score=30.24 Aligned_cols=34 Identities=15% Similarity=-0.072 Sum_probs=26.7
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
++.|..++.+.++++ + -+|++||+.|+.+.+--.
T Consensus 501 ~~~~~~P~~i~~v~~-l-----P~t~~GKi~r~~L~~~~~ 534 (539)
T PRK06334 501 TSSILKISYHHQVES-I-----PMLGTGKPDYCSLNALAK 534 (539)
T ss_pred Ccccccchheeeecc-c-----ccccCCcccHHHHHHHHH
Confidence 677888888887754 3 589999999999966533
No 111
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=67.64 E-value=8.5 Score=29.83 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=25.7
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 96 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~ 96 (107)
++.+..++.|.+++ .+ .+|++||+.|+.+.+.
T Consensus 526 l~~~~~P~~v~~v~-~l-----P~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 526 LTGYKQPRIIEFRK-EL-----PKTNVGKILRRELRDA 557 (560)
T ss_pred hhhccCCeEEEEhh-hC-----CCCccccccHHHHHHh
Confidence 78899999888874 33 4899999999998653
No 112
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=65.87 E-value=5.7 Score=31.48 Aligned_cols=30 Identities=17% Similarity=0.264 Sum_probs=23.6
Q ss_pred eeeEEEecC-CCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 65 IQKFEFLPA-DFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 65 i~~~~l~~~-~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.+.+++. +| -.|++||+.|+.+.+.|..
T Consensus 584 p~~~~~v~~~~l-----P~t~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 584 VRDVLLVPAGSI-----PRTSSGKIARRACRAAYLD 614 (631)
T ss_pred ccEEEEECCCcc-----ccCCCcHHHHHHHHHHHHc
Confidence 567777763 55 4899999999999988753
No 113
>PRK05691 peptide synthase; Validated
Probab=65.29 E-value=5.9 Score=38.71 Aligned_cols=51 Identities=14% Similarity=0.057 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhhhCCCCCcceeeEEEec-CCCCCCCCcccccCCCchHHHHHHHHHHHHhhh
Q psy2837 44 YKATQAAIDRANLKSISNAQKIQKFEFLP-ADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 105 (107)
Q Consensus 44 ~~~i~~~l~~~n~~~l~~~e~i~~~~l~~-~~ft~eng~lT~t~KlkR~~v~~~y~~~I~~ly 105 (107)
.+.+.+.|.+.+.. .+..+.+++ ..+ -.|++||++|+.+.++|.+.....|
T Consensus 515 ~~~i~~~l~~~~~~------~p~~~~~v~~~~l-----P~t~~GKi~R~~l~~~~~~~~~~~~ 566 (4334)
T PRK05691 515 IKSIRQAVAEACQE------APSVVLLLNPGAL-----PKTSSGKLQRSACRLRLADGSLDSY 566 (4334)
T ss_pred HHHHHHHHHHHcCC------CceEEEEECCCCC-----CCCCCccccHHHHHHHHHhcccchh
Confidence 44455555554332 344455553 233 3699999999999999988665544
No 114
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=64.98 E-value=36 Score=26.93 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=23.5
Q ss_pred eeeEEEecC-CCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 65 IQKFEFLPA-DFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 65 i~~~~l~~~-~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
++.+.+++. +| -.|++||+.|+.+.+.|.+
T Consensus 576 p~~v~~v~~~~l-----P~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 576 VADVRLVPAGAI-----PRTTSGKLARRACRAQYLD 606 (612)
T ss_pred ceEEEEECCCCc-----CcCCchHHHHHHHHHHHHc
Confidence 467777753 56 5899999999999988754
No 115
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=64.46 E-value=10 Score=29.26 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=25.6
Q ss_pred hhhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHH
Q psy2837 55 NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFV 93 (107)
Q Consensus 55 n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v 93 (107)
++. ++.|.+++.|.++++ + ..|++||+.|+.+
T Consensus 509 ~~~-l~~~~~P~~i~~~~~-i-----P~t~~gK~~r~~l 540 (541)
T TIGR03205 509 AGK-LGKHELPVAVEFVDE-L-----PRTPVGKLSRHEL 540 (541)
T ss_pred Hhh-cccccCCcEEEEecc-C-----CCCcccceeHhhc
Confidence 444 889999999999854 3 4899999999875
No 116
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=64.38 E-value=6.6 Score=30.34 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=24.5
Q ss_pred cceeeEEEecC-CCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 63 QKIQKFEFLPA-DFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 63 e~i~~~~l~~~-~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
..++.+.+++. +| -.|++||+.|+.+.+.+..
T Consensus 490 ~~P~~~~~v~~~~l-----P~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 490 VVPSDVVFVAPGSL-----PRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred CCccEEEEECCCCc-----CcCcchHHHHHHHHHHHHh
Confidence 56777888763 45 5899999999999877653
No 117
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=61.10 E-value=8.8 Score=28.48 Aligned_cols=28 Identities=18% Similarity=0.164 Sum_probs=22.8
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPF 92 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~ 92 (107)
++.+..+..|..+++ | ..|++||+.|+.
T Consensus 408 l~~~~~p~~i~~~~~-i-----P~t~~GK~~r~~ 435 (436)
T TIGR01923 408 LAKYKVPIAFEKLDE-L-----PYNASGKILRNQ 435 (436)
T ss_pred hhCCCCCeEEEEecC-C-----CCCCCCceeccc
Confidence 788889998888753 3 589999999975
No 118
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=60.24 E-value=14 Score=28.57 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=25.4
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 95 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~ 95 (107)
.++.+..+..+..+++ + -.|++||+.|+.+.+
T Consensus 523 ~l~~~~~P~~i~~v~~-~-----P~t~~GK~~r~~L~~ 554 (557)
T PRK07059 523 RLTNYKRPKFVEFRTE-L-----PKTNVGKILRRELRD 554 (557)
T ss_pred hcccccCCcEEEEecc-C-----CCCcccceeHHHHHh
Confidence 3888989888888754 3 589999999998753
No 119
>PRK08308 acyl-CoA synthetase; Validated
Probab=58.36 E-value=15 Score=27.37 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=23.3
Q ss_pred CCCCcceeeEEEecCCCCCCCCcccccCCCchHHH
Q psy2837 59 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFV 93 (107)
Q Consensus 59 l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v 93 (107)
++.|..+..+..+++ + -.|++||+.|+.+
T Consensus 379 l~~~~~P~~i~~v~~-i-----P~t~~GKi~r~~~ 407 (414)
T PRK08308 379 LAPYQVPHEIESVTE-I-----PKNANGKVSRKLL 407 (414)
T ss_pred CccccCCcEEEEecc-C-----CCCCCcCeehhhh
Confidence 888989988887753 3 4899999999954
No 120
>KOG2825|consensus
Probab=48.25 E-value=14 Score=27.25 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=20.1
Q ss_pred ccccCCCchHHHHHHHHHHHHhhhc
Q psy2837 82 LGPTMKVKRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 82 lT~t~KlkR~~v~~~y~~~I~~ly~ 106 (107)
.+.++=-.|+++.++|-+.|+++|.
T Consensus 270 ~~ck~C~ar~k~Q~kyLdqi~elye 294 (323)
T KOG2825|consen 270 VSCKKCAARRKMQSKYLDQIEELYE 294 (323)
T ss_pred cchHHHHHHHHHHHHHhhhHHHHHh
Confidence 4444445789999999999999995
No 121
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.64 E-value=29 Score=26.77 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=22.5
Q ss_pred ceeeEEEecC-CCCCCCCcccccCCCchHHHHHHHH
Q psy2837 64 KIQKFEFLPA-DFSIPTGELGPTMKVKRPFVVKKYQ 98 (107)
Q Consensus 64 ~i~~~~l~~~-~ft~eng~lT~t~KlkR~~v~~~y~ 98 (107)
++..+.+++. .+ ..|++||+.|+.+.+.|.
T Consensus 514 ~p~~v~~v~~~~l-----P~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 514 RPRNVVVLGPGSI-----PKTPSGKLRRANAAELVT 544 (545)
T ss_pred CccEEEEeCCCcC-----CCCCchhHHHHHHHHhcC
Confidence 5566777752 44 489999999999987663
No 122
>PF11046 HycA_repressor: Transcriptional repressor of hyc and hyp operons; InterPro: IPR021285 This family is conserved in Proteobacteria. It is likely to be the transcriptional repressor molecule for the hyc and hyp operons, which express, amongst others, the protein HycA. This protein may be harnessed for the reduction of technetium oxide, an unwelcome product of radio-nucleotide bioaccumulation. HycA produces formate hydrogenlyase, one of the key proteins necessary for metal compound reduction [].
Probab=32.67 E-value=43 Score=22.19 Aligned_cols=27 Identities=26% Similarity=0.434 Sum_probs=19.4
Q ss_pred CcccccCCC-chHHHHHHHHHHHHhhhc
Q psy2837 80 GELGPTMKV-KRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 80 g~lT~t~Kl-kR~~v~~~y~~~I~~ly~ 106 (107)
|.+-.+-.. -|.+|.++|-+.|..+|+
T Consensus 101 G~iDg~v~nRDre~VLEHYL~KIa~iYd 128 (148)
T PF11046_consen 101 GLIDGRVSNRDREQVLEHYLEKIASIYD 128 (148)
T ss_pred CccccccccccHHHHHHHHHHHHHHHHH
Confidence 444433333 488999999999988885
No 123
>PRK10198 formate hydrogenlyase regulatory protein HycA; Provisional
Probab=29.80 E-value=51 Score=21.92 Aligned_cols=18 Identities=33% Similarity=0.553 Sum_probs=15.8
Q ss_pred chHHHHHHHHHHHHhhhc
Q psy2837 89 KRPFVVKKYQSIIDKFYD 106 (107)
Q Consensus 89 kR~~v~~~y~~~I~~ly~ 106 (107)
-|..|.++|-+.|..+|+
T Consensus 111 Dr~~VleHYL~kIa~vYd 128 (152)
T PRK10198 111 DREQVLEHYLEKIASVYD 128 (152)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 488999999999988885
No 124
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=28.36 E-value=2.5e+02 Score=22.41 Aligned_cols=38 Identities=13% Similarity=0.266 Sum_probs=30.6
Q ss_pred hhCCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHHHHHH
Q psy2837 56 LKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 99 (107)
Q Consensus 56 ~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~~y~~ 99 (107)
+.|+..|..+-++.+++ .| -+|+-|||-.+.+.++...
T Consensus 501 ~~GlAa~K~PDrie~v~-~~-----P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 501 ERGLAAFKLPDRIEFVD-SL-----PLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred HcchhhhcCCcceeecc-cC-----CCcccccccHHHHHHHhhh
Confidence 33688999999999985 44 5899999999998877654
No 125
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=27.21 E-value=59 Score=21.47 Aligned_cols=40 Identities=8% Similarity=0.077 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhhhCCCCCcceeeEEEecCCCCCCCCcccccCC
Q psy2837 44 YKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMK 87 (107)
Q Consensus 44 ~~~i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~K 87 (107)
.+.|.+.+.+.-.. + +++.++--..+.-+||.+ .+|+.+|
T Consensus 41 ~e~L~~~I~~aL~~-~-Gv~~V~V~i~~~p~Wt~d--~it~~gr 80 (146)
T TIGR02159 41 LEVIRQDIRDAVRA-L-GVEVVEVSTSLDPPWTTD--WITEDAR 80 (146)
T ss_pred HHHHHHHHHHHHHh-c-CCCeEEEeEeeCCCCChH--HCCHHHH
Confidence 34455555543222 2 344444333455679986 8998874
No 126
>PF07026 DUF1317: Protein of unknown function (DUF1317); InterPro: IPR009750 This entry is represented by Bacteriophage lambda, Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=26.70 E-value=48 Score=18.62 Aligned_cols=24 Identities=25% Similarity=0.173 Sum_probs=18.1
Q ss_pred CCC-CCCCcccccCCCchHHHHHHH
Q psy2837 74 DFS-IPTGELGPTMKVKRPFVVKKY 97 (107)
Q Consensus 74 ~ft-~eng~lT~t~KlkR~~v~~~y 97 (107)
||| .-+|++.|-|++.++.+.+..
T Consensus 16 ~ys~~~~GWl~Pgg~vi~NPlkAqR 40 (60)
T PF07026_consen 16 PYSHFKNGWLMPGGKVITNPLKAQR 40 (60)
T ss_pred EEEeccceeecCCCeeEcCHHHHHH
Confidence 553 468999999999888765443
No 127
>TIGR02945 SUF_assoc FeS assembly SUF system protein. Members of this family belong to the broader Pfam family pfam01883, or Domain of Unknown Function DUF59. Many members of DUF59 are candidate ring hydroxylating complex subunits. However, members of the narrower family defined here all are found in genomes that carry the FeS assembly SUF system. For 70 % of these species, the member of this protein family is found as part of the SUF locus, usually immediately downstream of the sufS gene.
Probab=26.31 E-value=1.1e+02 Score=18.25 Aligned_cols=41 Identities=2% Similarity=0.037 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhhhCCCCCcceeeEEEecCCCCCCCCcccccCC
Q psy2837 44 YKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMK 87 (107)
Q Consensus 44 ~~~i~~~l~~~n~~~l~~~e~i~~~~l~~~~ft~eng~lT~t~K 87 (107)
.+.+.+.+.+.-.. +++.+.++--.-..-+||.+ ++|+-+|
T Consensus 53 ~~~l~~~i~~al~~-l~gv~~v~v~i~~~~~~~~~--~~~~~~~ 93 (99)
T TIGR02945 53 AGSMPGEVENAVRA-VPGVGSVTVELVWDPPWTPE--RMSEEAR 93 (99)
T ss_pred HHHHHHHHHHHHHh-CCCCceEEEEEEeeCCCChH--HCCHHHH
Confidence 34455555554232 56666665333467899886 8887664
No 128
>CHL00103 rpl35 ribosomal protein L35
Probab=26.15 E-value=22 Score=20.33 Aligned_cols=13 Identities=15% Similarity=-0.120 Sum_probs=9.6
Q ss_pred cccccCCCchHHH
Q psy2837 81 ELGPTMKVKRPFV 93 (107)
Q Consensus 81 ~lT~t~KlkR~~v 93 (107)
-+|.+|||+|...
T Consensus 15 KvT~sGKvkr~~a 27 (65)
T CHL00103 15 KKTGNGKFLRRKA 27 (65)
T ss_pred EecCCCCEEeccC
Confidence 3688899988653
No 129
>PF13438 DUF4113: Domain of unknown function (DUF4113)
Probab=25.58 E-value=55 Score=17.54 Aligned_cols=13 Identities=31% Similarity=0.319 Sum_probs=9.7
Q ss_pred HHHHHHHHHHhhh
Q psy2837 45 KATQAAIDRANLK 57 (107)
Q Consensus 45 ~~i~~~l~~~n~~ 57 (107)
+.+.+.|+++|..
T Consensus 2 ~~LM~~iD~iN~r 14 (52)
T PF13438_consen 2 QRLMQAIDAINRR 14 (52)
T ss_pred hHHHHHHHHHHHh
Confidence 3577888888875
No 130
>PF15205 PLAC9: Placenta-specific protein 9
Probab=24.60 E-value=1.2e+02 Score=17.58 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=25.4
Q ss_pred CCCCCCCCcccccCCCchHHHHHHHHHHHHhhh
Q psy2837 73 ADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 105 (107)
Q Consensus 73 ~~ft~eng~lT~t~KlkR~~v~~~y~~~I~~ly 105 (107)
+||++..|-.+-+---.|+......-+.|+++-
T Consensus 2 ep~~~~~gd~a~St~Cdrhmav~~RLdviEe~v 34 (74)
T PF15205_consen 2 EPFSPSRGDPARSTGCDRHMAVHSRLDVIEETV 34 (74)
T ss_pred CCCCCCCCCccccchhHHHHHHHHHHHHHHHHH
Confidence 688888777776666778888888888887764
No 131
>TIGR00001 rpmI_bact ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein.
Probab=23.47 E-value=25 Score=19.88 Aligned_cols=13 Identities=23% Similarity=0.250 Sum_probs=9.5
Q ss_pred cccccCCCchHHH
Q psy2837 81 ELGPTMKVKRPFV 93 (107)
Q Consensus 81 ~lT~t~KlkR~~v 93 (107)
-+|.||||+|...
T Consensus 14 K~T~tGKvkr~~a 26 (63)
T TIGR00001 14 KITGSGKIKRKKA 26 (63)
T ss_pred EEcCCCCEEeccc
Confidence 3688898887653
No 132
>KOG1179|consensus
Probab=20.96 E-value=47 Score=27.20 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=25.4
Q ss_pred CCCCCcceeeEEEecCCCCCCCCcccccCCCchHHHHH
Q psy2837 58 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 95 (107)
Q Consensus 58 ~l~~~e~i~~~~l~~~~ft~eng~lT~t~KlkR~~v~~ 95 (107)
.||+|.++.-++|.++- +.|.|+|++...+.+
T Consensus 578 ~LP~YA~P~FlRl~~~i------~~TgTFKl~K~~L~~ 609 (649)
T KOG1179|consen 578 NLPSYARPRFLRLQDEI------EKTGTFKLQKTELQK 609 (649)
T ss_pred hCccccchHHHHHHhhh------hcccchhhHHHHHHH
Confidence 39999999998888643 689999987766543
No 133
>COG0291 RpmI Ribosomal protein L35 [Translation, ribosomal structure and biogenesis]
Probab=20.47 E-value=33 Score=19.68 Aligned_cols=14 Identities=29% Similarity=0.254 Sum_probs=10.3
Q ss_pred cccccCCCchHHHH
Q psy2837 81 ELGPTMKVKRPFVV 94 (107)
Q Consensus 81 ~lT~t~KlkR~~v~ 94 (107)
-+|.+|||+|....
T Consensus 15 K~T~~Gkikr~~A~ 28 (65)
T COG0291 15 KITGTGKIKRKHAG 28 (65)
T ss_pred eecCCCcEEecccc
Confidence 36889999887543
Done!