RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2837
         (107 letters)



>d1rjta_ d.9.1.1 (A:) Small inducible cytokine b11 (CXCL11/I-TAC)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 73

 Score = 24.0 bits (52), Expect = 2.5
 Identities = 5/47 (10%), Positives = 15/47 (31%), Gaps = 8/47 (17%)

Query: 65  IQKFEFLPADFSIPTGELGPTMKVKRPFV--------VKKYQSIIDK 103
           I+K   +    +    E+  T+K  +            +     +++
Sbjct: 24  IEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVER 70


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.133    0.372 

Gapped
Lambda     K      H
   0.267   0.0635    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 368,575
Number of extensions: 14407
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 2
Length of query: 107
Length of database: 2,407,596
Length adjustment: 67
Effective length of query: 40
Effective length of database: 1,487,686
Effective search space: 59507440
Effective search space used: 59507440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.1 bits)