RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2838
(458 letters)
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 51.6 bits (123), Expect = 1e-09
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHLGVRIKCDFCDKTFAHKPNLIAHM 228
K +PC QCGKSFT K H++ C C K F K +L+ HM
Sbjct: 2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50
Score = 49.7 bits (118), Expect = 7e-09
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 210 KCDFCDKTFAHKPNLIAHMNSAHNGVRFKCDHCVKSFNQKPNLISHIK 257
C C K+F HK HM+ + C C K F K +L+ H+K
Sbjct: 5 PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
Score = 49.3 bits (117), Expect = 9e-09
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 237 FKCDHCVKSFNQKPNLISHIKSVHEGIKYKCEECTKTFAQKQNLLSHVQAIH 288
+ C C KSF K H+ Y C C K F K +L+ H IH
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIH 53
Score = 47.4 bits (112), Expect = 4e-08
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 265 YKCEECTKTFAQKQNLLSHVQAIHMGIKYTCEVCSKSYNQVTNLLSHMTT 314
Y C+ C K+F K H+ Y C VC K + +L+ HM
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52
Score = 42.4 bits (99), Expect = 2e-06
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 293 YTCEVCSKSYNQVTNLLSHMTTVHQAQKYKCADCGRLFAQEHTLRTH 339
Y C+ C KS+ + HM+ + Y C CG+ F +H L H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49
Score = 34.7 bits (79), Expect = 0.001
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 321 YKCADCGRLFAQEHTLRTHTLSVHSGVRLTCRTCGLFCDSKRALTAHVR 369
Y C CG+ F + H C CG K L H++
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 46.5 bits (111), Expect = 6e-08
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 265 YKCEECTKTFAQKQNLLSHVQAIHMGIK-YTCEV 297
Y C+ C K F++ +L H++ +H + + C+V
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 42.7 bits (101), Expect = 1e-06
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 237 FKCDHCVKSFNQKPNLISHIKSVHEGIK-YKCE 268
+ C C K F++ +L HIK VH + +KC+
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 39.6 bits (93), Expect = 2e-05
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHLGVR-IKCD 212
K + C CGK F+ +L H+ +H R KC
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 38.8 bits (91), Expect = 3e-05
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 210 KCDFCDKTFAHKPNLIAHMNSAHNGVR-FKCD 240
C C K F+ +L H+ H R KC
Sbjct: 7 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 34.6 bits (80), Expect = 0.001
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 293 YTCEVCSKSYNQVTNLLSHMTTVHQAQK-YKC 323
Y C+ C K +++ +L H+ VH +++ +KC
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 33.4 bits (77), Expect = 0.003
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 321 YKCADCGRLFAQEHTLRTHTLSVHSGVR 348
Y C CG+ F++ L H VH+ R
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSER 33
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 40.0 bits (94), Expect = 1e-05
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 259 VHEGIK-YKCEECTKTFAQKQNLLSHVQAIH 288
H G K Y+C C F Q + H+ H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 36.9 bits (86), Expect = 1e-04
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIH 204
K + C C FT + H+ H
Sbjct: 7 KPYECYICHARFTQSGTMKMHILQKH 32
Score = 36.5 bits (85), Expect = 2e-04
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 232 HNGVR-FKCDHCVKSFNQKPNLISHIKSVH 260
H+G + ++C C F Q + HI H
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 34.6 bits (80), Expect = 0.001
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 287 IHMGIK-YTCEVCSKSYNQVTNLLSHMTTVH 316
H G K Y C +C + Q + H+ H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 33.8 bits (78), Expect = 0.002
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 203 IHLGVR-IKCDFCDKTFAHKPNLIAHMNSAH 232
H G + +C C F + H+ H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 32.6 bits (75), Expect = 0.004
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 321 YKCADCGRLFAQEHTLRTHTLSVHSG 346
Y+C C F Q T++ H L H+
Sbjct: 9 YECYICHARFTQSGTMKMHILQKHTE 34
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 36.8 bits (86), Expect = 1e-04
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 259 VHEGIK-YKCEECTKTFAQKQNLLSHVQAIHMG 290
+H G K Y C EC K F++ L+ H Q +H G
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQH-QRVHTG 32
Score = 32.2 bits (74), Expect = 0.007
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHLG 206
K + C +CGK+F+ L H +H G
Sbjct: 6 KPYGCVECGKAFSRSSILVQHQ-RVHTG 32
Score = 31.8 bits (73), Expect = 0.008
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 232 HNGVR-FKCDHCVKSFNQKPNLISHIKSVHEG 262
H+G + + C C K+F++ L+ H + VH G
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQR-VHTG 32
Score = 31.8 bits (73), Expect = 0.008
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 287 IHMGIK-YTCEVCSKSYNQVTNLLSHMTT 314
IH G K Y C C K++++ + L+ H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRV 29
Score = 31.4 bits (72), Expect = 0.010
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 203 IHLGVR-IKCDFCDKTFAHKPNLIAHM 228
IH G + C C K F+ L+ H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQ 27
Score = 29.1 bits (66), Expect = 0.082
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 315 VHQAQK-YKCADCGRLFAQEHTLRTHTLSVHSG 346
+H +K Y C +CG+ F++ L H VH+G
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQH-QRVHTG 32
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 36.2 bits (84), Expect = 2e-04
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 259 VHEGIK-YKCEECTKTFAQKQNLLSHVQAIHMGIKY 293
H G K Y C C KTF QKQ L H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMH-FKRYHDPNF 36
Score = 33.5 bits (77), Expect = 0.003
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 232 HNGVR-FKCDHCVKSFNQKPNLISHIKSVHE 261
H G + + C HC K+F QK L H K H+
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 32.7 bits (75), Expect = 0.004
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 203 IHLGVR-IKCDFCDKTFAHKPNLIAHMNSAHN 233
H G + C CDKTF K L H H+
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 31.6 bits (72), Expect = 0.009
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 287 IHMGIK-YTCEVCSKSYNQVTNLLSHMTTVH 316
H G K Y C C K++ Q L H H
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 31.2 bits (71), Expect = 0.015
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 179 KKFPCDQCGKSFTLKQNLTYH 199
K + C C K+F KQ L H
Sbjct: 7 KPYACSHCDKTFRQKQLLDMH 27
Score = 26.6 bits (59), Expect = 0.60
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 315 VHQAQK-YKCADCGRLFAQEHTLRTH 339
H +K Y C+ C + F Q+ L H
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMH 27
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 35.3 bits (82), Expect = 5e-04
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 265 YKCEECTKTFAQKQNLLSHVQAIHMGIK 292
+ CE CT+ FA++++L H H K
Sbjct: 3 FVCEVCTRAFARQEHLKRH-YRSHTNEK 29
Score = 33.4 bits (77), Expect = 0.002
Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHLG 206
+ F C+ C ++F +++L H H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY-RSHTN 27
Score = 31.4 bits (72), Expect = 0.009
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 237 FKCDHCVKSFNQKPNLISHIKSVHEGIK 264
F C+ C ++F ++ +L H + H K
Sbjct: 3 FVCEVCTRAFARQEHLKRHYR-SHTNEK 29
Score = 29.5 bits (67), Expect = 0.045
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 210 KCDFCDKTFAHKPNLIAHM 228
C+ C + FA + +L H
Sbjct: 4 VCEVCTRAFARQEHLKRHY 22
Score = 28.0 bits (63), Expect = 0.16
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 321 YKCADCGRLFAQEHTLRTHTLSVHSG 346
+ C C R FA++ L+ H H+
Sbjct: 3 FVCEVCTRAFARQEHLKRH-YRSHTN 27
Score = 28.0 bits (63), Expect = 0.18
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 293 YTCEVCSKSYNQVTNLLSHMTT 314
+ CEVC++++ + +L H +
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRS 24
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 34.9 bits (81), Expect = 6e-04
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 265 YKCEECTKTFAQKQNLLSHVQAIHMG 290
++C C + F++ +L +H H G
Sbjct: 4 FQCRICMRNFSRSDHLTTH-IRTHTG 28
Score = 32.2 bits (74), Expect = 0.005
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHLG 206
K F C C ++F+ +LT H+ H G
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR-THTG 28
Score = 31.0 bits (71), Expect = 0.016
Identities = 9/26 (34%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 237 FKCDHCVKSFNQKPNLISHIKSVHEG 262
F+C C+++F++ +L +HI+ H G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIR-THTG 28
Score = 29.5 bits (67), Expect = 0.055
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 210 KCDFCDKTFAHKPNLIAHM 228
+C C + F+ +L H+
Sbjct: 5 QCRICMRNFSRSDHLTTHI 23
Score = 28.0 bits (63), Expect = 0.17
Identities = 5/22 (22%), Positives = 15/22 (68%)
Query: 293 YTCEVCSKSYNQVTNLLSHMTT 314
+ C +C +++++ +L +H+ T
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRT 25
Score = 27.6 bits (62), Expect = 0.23
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 321 YKCADCGRLFAQEHTLRTHTLSVHSG 346
++C C R F++ L TH + H+G
Sbjct: 4 FQCRICMRNFSRSDHLTTH-IRTHTG 28
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 34.7 bits (80), Expect = 7e-04
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 259 VHEGIK-YKCEECTKTFAQKQNLLSHVQAIHMGI 291
GIK ++C +C ++F++ +L H + HM +
Sbjct: 5 GSTGIKPFQCPDCDRSFSRSDHLALH-RKRHMLV 37
Score = 31.2 bits (71), Expect = 0.016
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHLGV 207
K F C C +SF+ +L H H+ V
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHR-KRHMLV 37
Score = 29.3 bits (66), Expect = 0.072
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 232 HNGVR-FKCDHCVKSFNQKPNLISHIK 257
G++ F+C C +SF++ +L H K
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 28.2 bits (63), Expect = 0.18
Identities = 7/27 (25%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 203 IHLGVR-IKCDFCDKTFAHKPNLIAHM 228
G++ +C CD++F+ +L H
Sbjct: 5 GSTGIKPFQCPDCDRSFSRSDHLALHR 31
Score = 27.4 bits (61), Expect = 0.32
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 287 IHMGIK-YTCEVCSKSYNQVTNLLSHMTT 314
GIK + C C +S+++ +L H
Sbjct: 5 GSTGIKPFQCPDCDRSFSRSDHLALHRKR 33
Score = 24.3 bits (53), Expect = 4.6
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 313 TTVHQAQK-YKCADCGRLFAQEHTLRTH 339
T K ++C DC R F++ L H
Sbjct: 3 TRGSTGIKPFQCPDCDRSFSRSDHLALH 30
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 34.1 bits (79), Expect = 0.001
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 265 YKCEECTKTFAQKQNLLSHVQAIH 288
YKC EC K F+Q L++H Q IH
Sbjct: 3 YKCLECGKAFSQNSGLINH-QRIH 25
Score = 31.4 bits (72), Expect = 0.011
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 179 KKFPCDQCGKSFTLKQNLTYH 199
K + C +CGK+F+ L H
Sbjct: 1 KPYKCLECGKAFSQNSGLINH 21
Score = 29.9 bits (68), Expect = 0.034
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 237 FKCDHCVKSFNQKPNLISH 255
+KC C K+F+Q LI+H
Sbjct: 3 YKCLECGKAFSQNSGLINH 21
Score = 26.4 bits (59), Expect = 0.63
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 210 KCDFCDKTFAHKPNLIAHM 228
KC C K F+ LI H
Sbjct: 4 KCLECGKAFSQNSGLINHQ 22
Score = 26.0 bits (58), Expect = 0.71
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
Query: 321 YKCADCGRLFAQEHTL----RTHT 340
YKC +CG+ F+Q L R HT
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 25.2 bits (56), Expect = 1.7
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 293 YTCEVCSKSYNQVTNLLSHMTT 314
Y C C K+++Q + L++H
Sbjct: 3 YKCLECGKAFSQNSGLINHQRI 24
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 33.9 bits (78), Expect = 0.001
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 265 YKCEECTKTFAQKQNLLSHVQAIHMGIK 292
+ C EC K F + +L H H K
Sbjct: 3 FACPECPKRFMRSDHLSKH-IKTHQNKK 29
Score = 31.2 bits (71), Expect = 0.011
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHLGVR 208
KKF C +C K F +L+ H+ H +
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIK-THQNKK 29
Score = 30.4 bits (69), Expect = 0.028
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 237 FKCDHCVKSFNQKPNLISHIKSVHEGIK 264
F C C K F + +L HIK H+ K
Sbjct: 3 FACPECPKRFMRSDHLSKHIK-THQNKK 29
Score = 28.5 bits (64), Expect = 0.13
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 210 KCDFCDKTFAHKPNLIAHM 228
C C K F +L H+
Sbjct: 4 ACPECPKRFMRSDHLSKHI 22
Score = 27.3 bits (61), Expect = 0.31
Identities = 6/28 (21%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 321 YKCADCGRLFAQEHTLRTHTLSVHSGVR 348
+ C +C + F + L H + H +
Sbjct: 3 FACPECPKRFMRSDHLSKH-IKTHQNKK 29
Score = 26.9 bits (60), Expect = 0.48
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 293 YTCEVCSKSYNQVTNLLSHMTT 314
+ C C K + + +L H+ T
Sbjct: 3 FACPECPKRFMRSDHLSKHIKT 24
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 33.9 bits (78), Expect = 0.002
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 265 YKCEE--CTKTFAQKQNLLSHVQAIHMGIK-YTCE 296
+ C E C K+F K++L H +H + Y CE
Sbjct: 2 FSCPEPACGKSFNFKKHLKEH-MKLHSDTRDYICE 35
Score = 32.4 bits (74), Expect = 0.006
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 237 FKCDH--CVKSFNQKPNLISHIKSVHEGIK-YKCE 268
F C C KSFN K +L H+K +H + Y CE
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICE 35
Score = 30.5 bits (69), Expect = 0.030
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 181 FPCDQ--CGKSFTLKQNLTYHVNSIHLGVRI-KCDF 213
F C + CGKSF K++L H+ +H R C+F
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICEF 36
Score = 29.3 bits (66), Expect = 0.077
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 210 KCDFCDKTFAHKPNLIAHMNSAHNGVR-FKCD 240
C K+F K +L HM H+ R + C+
Sbjct: 5 PEPACGKSFNFKKHLKEHMKL-HSDTRDYICE 35
Score = 25.5 bits (56), Expect = 1.4
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 293 YTCE--VCSKSYNQVTNLLSHMTTVHQAQK-YKC 323
++C C KS+N +L HM H + Y C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKL-HSDTRDYIC 34
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 121
Score = 35.6 bits (82), Expect = 0.003
Identities = 11/41 (26%), Positives = 13/41 (31%), Gaps = 3/41 (7%)
Query: 207 VRIKCDFCDKTFAHKPNLIAHMNSAHNGVRFKCDHCVKSFN 247
C FCD+ FA +H H F D V
Sbjct: 14 QHTPCLFCDRLFASAEETFSHCKLEHQ---FNIDSMVHKHG 51
Score = 26.7 bits (59), Expect = 2.5
Identities = 6/24 (25%), Positives = 8/24 (33%)
Query: 294 TCEVCSKSYNQVTNLLSHMTTVHQ 317
C C + + SH HQ
Sbjct: 17 PCLFCDRLFASAEETFSHCKLEHQ 40
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 30.8 bits (70), Expect = 0.016
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 3/30 (10%)
Query: 265 YKC--EECTKTFAQKQNLLSHVQAIHMGIK 292
+ C C K F + L H + H G K
Sbjct: 3 FMCTWSYCGKRFTRSDELQRH-KRTHTGEK 31
Score = 28.1 bits (63), Expect = 0.15
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 179 KKFPCD--QCGKSFTLKQNLTYHVNSIHLGVR 208
+ F C CGK FT L H H G +
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGEK 31
Score = 26.9 bits (60), Expect = 0.39
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 3/30 (10%)
Query: 237 FKCDH--CVKSFNQKPNLISHIKSVHEGIK 264
F C C K F + L H + H G K
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKR-THTGEK 31
Score = 25.7 bits (57), Expect = 1.1
Identities = 6/21 (28%), Positives = 7/21 (33%), Gaps = 2/21 (9%)
Query: 210 KCDF--CDKTFAHKPNLIAHM 228
C + C K F L H
Sbjct: 4 MCTWSYCGKRFTRSDELQRHK 24
Score = 23.0 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 321 YKC--ADCGRLFAQEHTLRTHTLSVHSGVR 348
+ C + CG+ F + L+ H H+G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRH-KRTHTGEK 31
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 30.8 bits (69), Expect = 0.019
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 181 FPCDQCGKSFTLKQNLTYHVNSIH 204
+PC C K FT K N+T HV IH
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIH 25
Score = 29.2 bits (65), Expect = 0.059
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 265 YKCEECTKTFAQKQNLLSHVQAIH 288
Y C C K F +K N+ +HV+ IH
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIH 25
Score = 28.9 bits (64), Expect = 0.084
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 237 FKCDHCVKSFNQKPNLISHIKSVHE 261
+ C C K F +K N+ +H+K +H+
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIHK 26
Score = 25.4 bits (55), Expect = 1.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 211 CDFCDKTFAHKPNLIAHMNSAH 232
C FC K F K N+ AH+ H
Sbjct: 4 CPFCFKEFTRKDNMTAHVKIIH 25
Score = 25.4 bits (55), Expect = 1.6
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 293 YTCEVCSKSYNQVTNLLSHMTTVHQ 317
Y C C K + + N+ +H+ +H+
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIHK 26
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 30.9 bits (70), Expect = 0.021
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 2/30 (6%)
Query: 260 HEGIK-YKCEECTKTFAQKQNLLSHVQAIH 288
G + + C C F K N H +H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARH-LKVH 30
Score = 29.3 bits (66), Expect = 0.074
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 179 KKFPCDQCGKSFTLKQNLTYH 199
+ F C C +FT K N H
Sbjct: 6 RPFVCRICLSAFTTKANCARH 26
Score = 28.6 bits (64), Expect = 0.11
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 232 HNGVR-FKCDHCVKSFNQKPNLISHIK 257
+G R F C C+ +F K N H+K
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK 28
Score = 27.4 bits (61), Expect = 0.32
Identities = 6/19 (31%), Positives = 7/19 (36%)
Query: 210 KCDFCDKTFAHKPNLIAHM 228
C C F K N H+
Sbjct: 9 VCRICLSAFTTKANCARHL 27
Score = 25.1 bits (55), Expect = 2.1
Identities = 5/28 (17%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 288 HMGIK-YTCEVCSKSYNQVTNLLSHMTT 314
G + + C +C ++ N H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKV 29
Score = 24.3 bits (53), Expect = 3.7
Identities = 4/19 (21%), Positives = 6/19 (31%)
Query: 321 YKCADCGRLFAQEHTLRTH 339
+ C C F + H
Sbjct: 8 FVCRICLSAFTTKANCARH 26
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 26
Score = 29.8 bits (66), Expect = 0.044
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 263 IKYKCEECTKTFAQKQNLLSHVQAIH 288
+ YKC C++ F QK++L SH+ +H
Sbjct: 1 MPYKCSSCSQQFMQKKDLQSHMIKLH 26
Score = 27.1 bits (59), Expect = 0.40
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 321 YKCADCGRLFAQEHTLRTHTLSVH 344
YKC+ C + F Q+ L++H + +H
Sbjct: 3 YKCSSCSQQFMQKKDLQSHMIKLH 26
Score = 25.5 bits (55), Expect = 1.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 291 IKYTCEVCSKSYNQVTNLLSHMTTVH 316
+ Y C CS+ + Q +L SHM +H
Sbjct: 1 MPYKCSSCSQQFMQKKDLQSHMIKLH 26
Score = 25.5 bits (55), Expect = 1.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 237 FKCDHCVKSFNQKPNLISHIKSVH 260
+KC C + F QK +L SH+ +H
Sbjct: 3 YKCSSCSQQFMQKKDLQSHMIKLH 26
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 29.6 bits (67), Expect = 0.046
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 265 YKCEE--CTKTFAQKQNLLSHVQAIHMG 290
+KC C K++++ +NL +H H G
Sbjct: 3 HKCTFEGCRKSYSRLENLKTH-LRSHTG 29
Score = 28.1 bits (63), Expect = 0.16
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Query: 179 KKFPCDQ--CGKSFTLKQNLTYHVNSIHLG 206
K C C KS++ +NL H+ H G
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLR-SHTG 29
Score = 26.1 bits (58), Expect = 0.87
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 237 FKCDH--CVKSFNQKPNLISHIKSVHEG 262
KC C KS+++ NL +H++ H G
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLR-SHTG 29
Score = 25.8 bits (57), Expect = 1.2
Identities = 8/21 (38%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Query: 210 KCDF--CDKTFAHKPNLIAHM 228
KC F C K+++ NL H+
Sbjct: 4 KCTFEGCRKSYSRLENLKTHL 24
Score = 23.4 bits (51), Expect = 8.3
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 321 YKC--ADCGRLFAQEHTLRTHTLSVHSG 346
+KC C + +++ L+TH L H+G
Sbjct: 3 HKCTFEGCRKSYSRLENLKTH-LRSHTG 29
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 29.4 bits (66), Expect = 0.059
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 257 KSVHEGIK-YKCEECTKTFAQKQNLLSHVQAIHMG 290
+ + YKC+EC K+F+ +L H + H G
Sbjct: 4 EWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTG 37
Score = 25.9 bits (57), Expect = 1.3
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 232 HNGVR-FKCDHCVKSFNQKPNLISHIKSVHEG 262
R +KCD C KSF+ +L H + H G
Sbjct: 7 QRERRRYKCDECGKSFSHSSDLSKHRR-THTG 37
Score = 25.1 bits (55), Expect = 2.1
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHLG 206
+++ CD+CGKSF+ +L+ H H G
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHR-RTHTG 37
Score = 25.1 bits (55), Expect = 2.3
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 285 QAIHMGIK-YTCEVCSKSYNQVTNLLSHMTT 314
+ + Y C+ C KS++ ++L H T
Sbjct: 4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRT 34
Score = 24.4 bits (53), Expect = 3.9
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 203 IHLGVR-IKCDFCDKTFAHKPNLIAHM 228
R KCD C K+F+H +L H
Sbjct: 6 QQRERRRYKCDECGKSFSHSSDLSKHR 32
Score = 24.4 bits (53), Expect = 4.1
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 311 HMTTVHQAQK-YKCADCGRLFAQEHTLRTHTLSVHSG 346
+ ++ YKC +CG+ F+ L H H+G
Sbjct: 3 SEWQ-QRERRRYKCDECGKSFSHSSDLSKH-RRTHTG 37
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 29.2 bits (66), Expect = 0.068
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 265 YKCEE--CTKTFAQKQNLLSHVQAIHMG 290
Y C C + F++ +L H IH G
Sbjct: 3 YACPVESCDRRFSRSADLTRH-IRIHTG 29
Score = 27.7 bits (62), Expect = 0.25
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 179 KKFPCDQ--CGKSFTLKQNLTYHVNSIHLG 206
+ + C C + F+ +LT H+ IH G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIR-IHTG 29
Score = 25.7 bits (57), Expect = 1.1
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 237 FKCDH--CVKSFNQKPNLISHIKSVHEG 262
+ C C + F++ +L HI+ +H G
Sbjct: 3 YACPVESCDRRFSRSADLTRHIR-IHTG 29
Score = 24.6 bits (54), Expect = 2.9
Identities = 6/21 (28%), Positives = 10/21 (47%), Gaps = 2/21 (9%)
Query: 210 KCDF--CDKTFAHKPNLIAHM 228
C CD+ F+ +L H+
Sbjct: 4 ACPVESCDRRFSRSADLTRHI 24
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 28.6 bits (64), Expect = 0.10
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 265 YKCEECTKTFAQKQNLLSHVQAIHMG 290
Y C C + F ++ L+ H Q IH G
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQKIHSG 27
Score = 25.5 bits (56), Expect = 1.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 321 YKCADCGRLFAQEHTLRTHTLSVHSG 346
Y C C R F + L H +HSG
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQKIHSG 27
Score = 24.4 bits (53), Expect = 3.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 181 FPCDQCGKSFTLKQNLTYHVNSIHLG 206
+PC C ++FT + L H IH G
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQKIHSG 27
Score = 23.6 bits (51), Expect = 5.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 211 CDFCDKTFAHKPNLIAHMNSAHNG 234
C C++ F + LI H H+G
Sbjct: 4 CGLCNRAFTRRDLLIRHAQKIHSG 27
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 28.8 bits (64), Expect = 0.11
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 237 FKCDHCVKSFNQKPNLISHIKSVHE 261
FKC++C Q NL H+K H
Sbjct: 3 FKCNYCSFDTKQPSNLSKHMKKFHG 27
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 28.5 bits (64), Expect = 0.13
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 265 YKCEE--CTKTFAQKQNLLSHVQAIHMG 290
++C C K F+ NL +H IH G
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTH-VRIHTG 29
Score = 26.6 bits (59), Expect = 0.57
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 179 KKFPCDQ--CGKSFTLKQNLTYHVNSIHLG 206
K F C CGK F+L NL H IH G
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTH-VRIHTG 29
Score = 23.9 bits (52), Expect = 5.0
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 237 FKCDH--CVKSFNQKPNLISHIKSVHEG 262
F+C C K F+ NL +H++ +H G
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTHVR-IHTG 29
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 27.7 bits (61), Expect = 0.22
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 210 KCDFCDKTFAHKPNLIAHMNSAHNG 234
KC+ C K F+ K L HM H G
Sbjct: 3 KCEVCGKCFSRKDKLKTHMRC-HTG 26
Score = 23.9 bits (51), Expect = 4.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 183 CDQCGKSFTLKQNLTYHVNS 202
C+ CGK F+ K L H+
Sbjct: 4 CEVCGKCFSRKDKLKTHMRC 23
Score = 23.9 bits (51), Expect = 4.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 265 YKCEECTKTFAQKQNLLSHVQA 286
+KCE C K F++K L +H++
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRC 23
Score = 23.1 bits (49), Expect = 8.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 238 KCDHCVKSFNQKPNLISHIKS 258
KC+ C K F++K L +H++
Sbjct: 3 KCEVCGKCFSRKDKLKTHMRC 23
>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 37
Score = 28.1 bits (62), Expect = 0.23
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 293 YTCEVCSKSYNQVTNLLSHMTTVHQ 317
Y C+VCS+ Y ++N H T H+
Sbjct: 9 YRCKVCSRVYTHISNFCRHYVTSHK 33
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 27.3 bits (61), Expect = 0.37
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Query: 265 YKCEE--CTKTFAQKQNLLSHVQAIH 288
Y C+ C K F + +L+ H + H
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRH-KKSH 28
Score = 26.5 bits (59), Expect = 0.57
Identities = 7/23 (30%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Query: 179 KKFPCDQ--CGKSFTLKQNLTYH 199
+ + CD C K+F +L H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRH 24
Score = 25.4 bits (56), Expect = 1.7
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 237 FKCDH--CVKSFNQKPNLISHIK 257
+ CDH C K+F + +LI H K
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKK 26
Score = 24.2 bits (53), Expect = 4.3
Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 2/21 (9%)
Query: 210 KCDF--CDKTFAHKPNLIAHM 228
CD CDK F +LI H
Sbjct: 5 SCDHPGCDKAFVRNHDLIRHK 25
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 26.6 bits (59), Expect = 0.57
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 177 PVKKFPCDQCGKSFTLKQNLTYHVNS 202
P + + C C + F Q L H+N
Sbjct: 2 PPRSYTCSFCKREFRSAQALGGHMNV 27
>d1sata1 b.80.7.1 (A:247-471) Metalloprotease {Serratia marcescens
[TaxId: 615]}
Length = 225
Score = 29.0 bits (64), Expect = 0.98
Identities = 14/49 (28%), Positives = 18/49 (36%)
Query: 392 GGRMVGNVVGGSGVGGGQRMVENQRMLGNGGGDQVRGNGDDIRGDGDQG 440
G + N +GGSG N + G G D + G G G G
Sbjct: 78 AGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFGGGGADELWGGAG 126
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 25.8 bits (56), Expect = 1.1
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 320 KYKCADCGRLFAQEHTLRTHTLSVHS 345
K+ C C + A++ L H HS
Sbjct: 2 KFHCPHCDTVIARKSDLGVHLRKQHS 27
Score = 23.9 bits (51), Expect = 4.5
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 264 KYKCEECTKTFAQKQNLLSHVQAIH 288
K+ C C A+K +L H++ H
Sbjct: 2 KFHCPHCDTVIARKSDLGVHLRKQH 26
>d2ds5a1 g.39.1.11 (A:11-48) ClpX chaperone zinc binding domain
{Escherichia coli [TaxId: 562]}
Length = 38
Score = 25.7 bits (57), Expect = 1.5
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 6/40 (15%)
Query: 209 IKCDFCDKTFAHKPNLIAHMNSAHNGVRFKCDHCVKSFNQ 248
+ C FC K+ LIA + + CD CV N
Sbjct: 2 LYCSFCGKSQHEVRKLIAGPSV------YICDECVDLCND 35
>d2fzcb2 g.41.7.1 (B:101-153) Aspartate carbamoyltransferase,
Regulatory-chain, C-terminal domain {Escherichia coli
[TaxId: 562]}
Length = 53
Score = 25.8 bits (57), Expect = 1.9
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 9/37 (24%)
Query: 250 PNLISH---------IKSVHEGIKYKCEECTKTFAQK 277
N ISH ++ I KC+ C K F+
Sbjct: 12 SNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHN 48
Score = 24.7 bits (54), Expect = 5.2
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 207 VRIKCDFCDKTFAHK 221
+ +KC +C+K F+H
Sbjct: 34 IALKCKYCEKEFSHN 48
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 24.9 bits (54), Expect = 1.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 237 FKCDHCVKSFNQKPNLISHIKS 258
+ C +C SF K NL H+KS
Sbjct: 2 YHCTYCNFSFKTKGNLTKHMKS 23
Score = 23.4 bits (50), Expect = 8.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 181 FPCDQCGKSFTLKQNLTYHVNS 202
+ C C SF K NLT H+ S
Sbjct: 2 YHCTYCNFSFKTKGNLTKHMKS 23
>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 31
Score = 25.0 bits (54), Expect = 2.0
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 179 KKFPCD--QCGKSFTLKQNLTYHVNSIH 204
K F CD C FT K N+ H N H
Sbjct: 1 KNFTCDSDGCDLRFTTKANMKKHFNRFH 28
Score = 25.0 bits (54), Expect = 2.2
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 212 DFCDKTFAHKPNLIAHMNSAHN 233
D CD F K N+ H N HN
Sbjct: 8 DGCDLRFTTKANMKKHFNRFHN 29
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 25.0 bits (54), Expect = 2.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHLGV 207
K + C CG F K ++YHV S V
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDGSV 30
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 25.9 bits (57), Expect = 2.4
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 7/37 (18%)
Query: 293 YTCEVCSKSYNQ--VTNLLSHMTTVHQAQKYKCADCG 327
+ C VCS ++ L MT ++C C
Sbjct: 15 FKCPVCSSTFTDLEANQLFDPMTG-----TFRCTFCH 46
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.6 bits (54), Expect = 2.5
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 2/24 (8%)
Query: 179 KKFPCDQ--CGKSFTLKQNLTYHV 200
+ + C C K F NL H+
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHI 24
Score = 23.8 bits (52), Expect = 4.9
Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 237 FKCDH--CVKSFNQKPNLISHIKS 258
+ C C K F Q NL SHI +
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILT 26
Score = 23.5 bits (51), Expect = 7.6
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Query: 265 YKCEE--CTKTFAQKQNLLSHV 284
Y C C K FAQ NL SH+
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHI 24
Score = 23.1 bits (50), Expect = 9.9
Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Query: 210 KCDF--CDKTFAHKPNLIAHM 228
C F C+K FA NL +H+
Sbjct: 4 VCPFDGCNKKFAQSTNLKSHI 24
>d2rdza1 a.138.1.3 (A:38-477) Cytochrome c nitrite reductase
{Escherichia coli [TaxId: 562]}
Length = 440
Score = 27.9 bits (61), Expect = 3.1
Identities = 18/158 (11%), Positives = 38/158 (24%), Gaps = 18/158 (11%)
Query: 197 TYHVNSIHLGVRIKCDFCDKTFAHKPNLIAHMNSAHNGVRFKCDHCVKSFNQKPNLISHI 256
+ + + C C H + + ++
Sbjct: 109 KWARGGPEIVNNLGCADC-----HNTAS-PEFAKGKPELTLSRPYAARAMEAIGKPFEKA 162
Query: 257 KSVHEGIKYKCEECTKTFAQKQNLLSHVQAIHMGIKYTCEVCSKSYNQVTNLLSHMTTVH 316
+ C +C + + G+ E + Y+++ + +
Sbjct: 163 -GRFDQQSMVCGQCHVEYYFDGKNKAVKFPWDDGM--KVENMEQYYDKI----AFSDWTN 215
Query: 317 QAQKYKCADCGRLFAQEHTLRTHTLSVHSGVRLTCRTC 354
K L AQ T T +H +TC C
Sbjct: 216 SLSKTPM-----LKAQHPEYETWTAGIHGKNNVTCIDC 248
>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger
domain-containing protein 1 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 74
Score = 25.4 bits (55), Expect = 3.6
Identities = 7/40 (17%), Positives = 12/40 (30%), Gaps = 3/40 (7%)
Query: 183 CDQCGKSFTLKQ---NLTYHVNSIHLGVRIKCDFCDKTFA 219
C K +T + H ++C C+K
Sbjct: 23 APCCDKLYTCRLCHDTNEDHQLDRFKVKEVQCINCEKLQH 62
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 24.4 bits (53), Expect = 3.7
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 293 YTCEV--CSKSYNQVTNLLSHMTTVH 316
Y C++ C+K Y ++L H+ TVH
Sbjct: 3 YVCKLPGCTKRYTDPSSLRKHVKTVH 28
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 24.3 bits (52), Expect = 4.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 181 FPCDQCGKSFTLKQNLTYHVNS 202
F C +CGK+FT + + H ++
Sbjct: 5 FVCSKCGKTFTRRNTMARHADN 26
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.2 bits (52), Expect = 4.0
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 323 CADCGRLFAQEHTLRTHTLSVHSG 346
CA+CG+ F + L+ H L VH+G
Sbjct: 5 CAECGKAFVESSKLKRHQL-VHTG 27
>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 61
Score = 25.1 bits (54), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 265 YKC--EECTKTFAQKQNLLSHVQAIH 288
Y+C + C F +QNL+ H QA+H
Sbjct: 21 YRCVHQGCFAAFTIQQNLILHYQAVH 46
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 25.0 bits (55), Expect = 4.3
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 236 RFKCDHCVKSFNQKPNLISHIKS 258
+C C + F NL +H +S
Sbjct: 15 LHRCLACARYFIDSTNLKTHFRS 37
Score = 25.0 bits (55), Expect = 5.2
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 211 CDFCDKTFAHKPNLIAHMNS 230
C C + F NL H S
Sbjct: 18 CLACARYFIDSTNLKTHFRS 37
>d1kapp1 b.80.7.1 (P:247-470) Metalloprotease {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 224
Score = 26.7 bits (58), Expect = 4.7
Identities = 13/49 (26%), Positives = 17/49 (34%)
Query: 392 GGRMVGNVVGGSGVGGGQRMVENQRMLGNGGGDQVRGNGDDIRGDGDQG 440
G V N +GGSG + G G D + G + G G
Sbjct: 78 AGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAG 126
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 28
Score = 23.9 bits (51), Expect = 4.7
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 265 YKCEECTKTFAQKQNLLSH 283
++C +C K + +K+NLL H
Sbjct: 2 FECPKCGKCYFRKENLLEH 20
Score = 23.1 bits (49), Expect = 8.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 181 FPCDQCGKSFTLKQNLTYH 199
F C +CGK + K+NL H
Sbjct: 2 FECPKCGKCYFRKENLLEH 20
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 24.6 bits (53), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
Query: 181 FPCDQCGKSFT----LKQNLTYH-VNSIHLGV 207
PC CGK FT L+Q+ H V S+ LG
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQHGVTSLQLGY 38
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 24.0 bits (52), Expect = 5.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 321 YKCADCGRLFAQEHTLRTHT 340
+ C CGR FA+ + HT
Sbjct: 4 FACDICGRKFARSDERKRHT 23
Score = 23.2 bits (50), Expect = 7.4
Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 179 KKFPCDQCGKSFTLKQNLTYHVNSIHL 205
K F CD CG+ F H IHL
Sbjct: 2 KPFACDICGRKFARSDERKRHTK-IHL 27
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 23.7 bits (51), Expect = 5.4
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 320 KYKCADCGRLFAQEHTLRTHTLSVHSGVR 348
KY C +CG + L+ H + H+ VR
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRT-HTDVR 28
>d1g9ka1 b.80.7.1 (A:245-463) Metalloprotease {Pseudomonas sp., tac
ii 18 [TaxId: 306]}
Length = 219
Score = 26.7 bits (58), Expect = 5.5
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 392 GGRMVGNVVGGSGVGGGQRMVENQRMLGNGGGDQVRGN-GDDIRGDGD 438
G + N +GGSG + G G D + G G D+ G
Sbjct: 77 QGVTIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGADVLWGGT 124
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.134 0.417
Gapped
Lambda K H
0.267 0.0649 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,755,967
Number of extensions: 85472
Number of successful extensions: 553
Number of sequences better than 10.0: 1
Number of HSP's gapped: 547
Number of HSP's successfully gapped: 201
Length of query: 458
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 370
Effective length of database: 1,199,356
Effective search space: 443761720
Effective search space used: 443761720
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (24.7 bits)