BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2842
(486 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328708315|ref|XP_001945956.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Acyrthosiphon pisum]
Length = 693
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 142/221 (64%), Positives = 179/221 (80%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ KEYE NVRTVAKAF+KLGLER+H VCIIGFN+PEWFYSDLGAIYAGGFAAGMYTTN
Sbjct: 109 KVTYKEYEQNVRTVAKAFIKLGLERFHGVCIIGFNSPEWFYSDLGAIYAGGFAAGMYTTN 168
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
+ACLHCL TS ANI VVED KQLEKIL +K++ P LKAI+QYEGKP + GV+SW+++M
Sbjct: 169 LVDACLHCLETSKANIAVVEDSKQLEKILSIKSRLPHLKAIIQYEGKPTEEGVLSWEDVM 228
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
+G A D+ L+ +L+T+ NECCTLV+TSGTEGASK VM+SHDN+T+NA I + L
Sbjct: 229 RIGSAESDDKLNAILKTMGVNECCTLVFTSGTEGASKAVMVSHDNLTYNAYVITNFLSLT 288
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLSH+AAQ DIYS +++ A ++F +K+ALK
Sbjct: 289 DGKEVLVSYLPLSHVAAQITDIYSAISIGAQVFFGEKDALK 329
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 118/192 (61%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ KL + G +K++IA++AK L HY ++ E Y+Y+ RWLI ++K
Sbjct: 351 WEKINEKLVSIGRKSGSLKKYIADWAKEVGLNHYEDAMKGVERETYSYKFFRWLIYGRIK 410
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+G DRC+ +S AAPIS ELK+YF+SLDIP+CE FGMSEC GAHT+S P D + GVG
Sbjct: 411 SAIGFDRCKYFISAAAPISVELKKYFMSLDIPLCEAFGMSECGGAHTLSNPTDENVAGVG 470
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T+ G +KI PD++GNGE+C+ R V +L L +E+ S + W +
Sbjct: 471 KTLEGVTSKIDKPDKDGNGELCIYG-----RHVFMGYLNL-MEKTEST----LDTDGWLH 520
Query: 242 S-DLGAIYAGGF 252
S D+ I G+
Sbjct: 521 SGDIAQIDDKGY 532
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 53/65 (81%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V+ A Q ID AN K+ISNAQKIQKF LP DFS+PTGELGPT+K+KRP V +KY+ +I
Sbjct: 629 EVFDAIQKGIDAANKKAISNAQKIQKFSLLPVDFSLPTGELGPTLKIKRPVVNEKYKDLI 688
Query: 481 DKFYD 485
++FY+
Sbjct: 689 EEFYN 693
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
P+Q+L + YT+E +GR + + EAG A P+SVPGLL ++A +Y D AL K N
Sbjct: 49 PDQVLPASQKYTSEANGRVTLRI-EAG-ADNTPVSVPGLLAKSAEKYGDLPALNYKSAN- 105
Query: 66 EWKKVTYK 73
+W KVTYK
Sbjct: 106 KWVKVTYK 113
>gi|328792515|ref|XP_624225.3| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Apis
mellifera]
Length = 656
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/232 (58%), Positives = 174/232 (75%), Gaps = 1/232 (0%)
Query: 191 IVDPDEEG-NGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
+ PDE G EYE VRTVAKAFLKLGLERYH VCI+GFN+PEW +++LGAIYA
Sbjct: 92 VTRPDENGIRKTYTYSEYENQVRTVAKAFLKLGLERYHGVCILGFNSPEWLFANLGAIYA 151
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD 309
GGFA G+YTTN+PEAC HC + S ANI VVE+ KQLEKIL++K P LK IVQYEGKP+
Sbjct: 152 GGFAVGIYTTNNPEACQHCAIISKANIIVVENTKQLEKILQIKHNLPHLKVIVQYEGKPE 211
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
+ ++SW++L+++G A D L+ VL+TIA NECCTLV+TSGT G K VMLSHDN N
Sbjct: 212 EKDILSWNDLIKIGEAESDVKLNEVLKTIAVNECCTLVFTSGTVGNPKAVMLSHDNFLSN 271
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +L+ +++S+LPLSH+AAQ VDIY ++ +A T++FAD+NALK
Sbjct: 272 VRSMSMALELKEGYETLVSYLPLSHVAAQVVDIYFMLYIAGTIYFADQNALK 323
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 47/192 (24%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q +K WIA++AKS +L + + + N + ++Y + + L+ +K++
Sbjct: 345 WEKIYEKMQAVAANNGFIKTWIASWAKSQALYYNINKMNGNDRKHWSYIIAKCLVFNKIR 404
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+ + +GMSEC+GAHTV+ P + KL+ VG
Sbjct: 405 AAL-------------------------------DAYGMSECSGAHTVNTPVNLKLNSVG 433
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R I G TK+ +PD G GEIC+ R + +L ++ + V +A W +
Sbjct: 434 RPIFGLNTKLYNPDSNGEGEICMSG-----RHIFMGYLNEP-QKTNEV----LDADGWLH 483
Query: 242 S-DLGAIYAGGF 252
S DLG + GF
Sbjct: 484 SGDLGKFDSDGF 495
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+ AI RAN K IS+AQ++QKF+ LP DFSI TGELGPT+KVKR V K Y+++I+
Sbjct: 593 VYEEIDKAIKRANTKVISHAQRVQKFQILPHDFSIVTGELGPTLKVKRNIVYKMYENLIE 652
Query: 482 KFY 484
Y
Sbjct: 653 DMY 655
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQK-QEN 64
P+QIL +D TTE +GR RI L V + PIS+PGL+ TA +Y + +AL + EN
Sbjct: 40 PDQILPADSFKTTEHNGRVRIQLNNEDVNSM-PISIPGLMSNTAKKYSNHLALVTRPDEN 98
Query: 65 GEWKKVTY 72
G K TY
Sbjct: 99 GIRKTYTY 106
>gi|345488807|ref|XP_001606071.2| PREDICTED: very long-chain-fatty-acid--CoA ligase bubblegum-like
[Nasonia vitripennis]
Length = 663
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 173/218 (79%), Gaps = 1/218 (0%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
KEYE+ VRTVAKAFL LGLER+HSVCI+GFNAP+WF SD+ AIYAGGFAAG+YTTNSPEA
Sbjct: 109 KEYESQVRTVAKAFLHLGLERHHSVCILGFNAPQWFISDIAAIYAGGFAAGIYTTNSPEA 168
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
C +C +S ANI VVED KQLEKIL++K PKLKAI+QY+G P V+SW+EL+E+G+
Sbjct: 169 CQYCAESSRANIIVVEDAKQLEKILEIKKNLPKLKAIIQYDGIPSTKDVLSWNELLEIGQ 228
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
D+ L+ VL+TI NECCTLVYTSGT G K VML+HDN+ +A I+ L A
Sbjct: 229 RQSDDQLETVLKTIGINECCTLVYTSGTVGNPKAVMLTHDNLLTDARAILAAGDLNREAQ 288
Query: 385 -SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+VISFLPLSH+AAQ VDI++ M ++AT++FADKNALK
Sbjct: 289 ETVISFLPLSHVAAQVVDIFTCMLMSATVYFADKNALK 326
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 55/238 (23%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q +K WIAN+AK+ LQ+ + + + ++Y + +WLI KVK
Sbjct: 348 WEKIYEKMQAVARNNGPIKTWIANWAKAQGLQYNLDRMNGVEYKSWSYLIAKWLIFRKVK 407
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+ I + +GMSECAGAH++ + F+L VG
Sbjct: 408 AAL----------------------------VIIDAYGMSECAGAHSLGTSNAFRLGSVG 439
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R +PG TK+ + D G GEIC+ + + + G + H+ W +
Sbjct: 440 RALPGFLTKLDNVDNTGEGEICMGGRHVFMGYLNEPEKIKGTKDEHN----------WLH 489
Query: 242 S-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKL 298
S DLG I + GF +Y T + + + NI V +E++ VK +CP L
Sbjct: 490 SGDLGKIDSDGF---LYVTGRIKELV--ITAGGENIPPV----HIEEL--VKKECPAL 536
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 50/63 (79%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+YK + AI RAN K+ISNAQ++QKF LP DFS+PTGELGPT+K+KR VVK+Y ++I+
Sbjct: 599 IYKGIEEAITRANEKAISNAQRVQKFRILPHDFSVPTGELGPTLKLKRNVVVKQYANLIE 658
Query: 482 KFY 484
Y
Sbjct: 659 DMY 661
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 4 ERPNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQE 63
E P+QIL SD+ T EP GR RI L + PISVPGLL R A++YPD AL +
Sbjct: 39 EGPDQILSSDVDTTWEPDGRVRIKLDNPADESYAPISVPGLLKRVASKYPDHPALISRPG 98
Query: 64 -NGEWKKVTYK 73
+G+ +YK
Sbjct: 99 VDGQRTTYSYK 109
>gi|340708785|ref|XP_003393002.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Bombus
terrestris]
Length = 684
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/257 (54%), Positives = 182/257 (70%), Gaps = 8/257 (3%)
Query: 173 DDFK-------LDGVGRTIPGTQTKIVDPDEEGNGEI-CLKEYEANVRTVAKAFLKLGLE 224
+DFK L R P PDE G+ + EYE ++TVAKAFLKLGLE
Sbjct: 65 EDFKPISVPGLLSNTVRKYPNHIALAATPDETGHRKTYTFIEYENQIKTVAKAFLKLGLE 124
Query: 225 RYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQ 284
R+H VCI+GFN+PEW +S+LGAIYAGG A G+Y TN+P+AC HCL S ANI VVED KQ
Sbjct: 125 RFHGVCILGFNSPEWLFSNLGAIYAGGIAVGIYATNTPDACQHCLQISQANIVVVEDSKQ 184
Query: 285 LEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECC 344
LEKIL+++ P LKAI+QY G P++ V+SW++L+++G A D+ L+ +L+ IATNECC
Sbjct: 185 LEKILQIRHNLPHLKAIIQYTGTPNEKDVLSWNDLIKIGEAESDDKLNEILKRIATNECC 244
Query: 345 TLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYS 404
TLV+TSGT G K VMLSHDN+ +N + + FK ++A +IS+LPLSH+AAQ +DIY
Sbjct: 245 TLVFTSGTVGYPKAVMLSHDNLIYNVRSMNRVFKFKTACEHIISYLPLSHVAAQAIDIYY 304
Query: 405 VMTVAATLWFADKNALK 421
+ + ATL FAD+NALK
Sbjct: 305 SIYIVATLHFADRNALK 321
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 114/191 (59%), Gaps = 15/191 (7%)
Query: 67 WKKVTYKLQT---TG-VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQ 122
W+K+ KLQ+ TG +K I ++A S + + + N + + Y +WLI +K+K
Sbjct: 343 WEKIYSKLQSEVNTGFIKTCIVSWATSQGYHYNVNKMNGNDHKHWGYIFAKWLIFNKIKT 402
Query: 123 AMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGR 182
A+GLDRC ++ AAP+S ++K YFLSLDIPI E +GMSEC+G H ++APD FKL +GR
Sbjct: 403 ALGLDRCHRCITAAAPLSIQIKEYFLSLDIPILEAYGMSECSGGHILTAPDQFKLGSIGR 462
Query: 183 TIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
T+PG +TK+ +PD G GE+C+ R + +L + ++ + W +S
Sbjct: 463 TVPGLKTKLDNPDSNGEGEVCMYG-----RHIFMGYLNEPEKTGEAL-----DGERWLHS 512
Query: 243 -DLGAIYAGGF 252
D+G I + GF
Sbjct: 513 GDVGKIDSNGF 523
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 49/63 (77%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+ AI RAN KSISNAQK+QKF+ LP DFS+ TGELGPT+K+KR V KKY+++I+
Sbjct: 621 VYEEIDKAIKRANTKSISNAQKVQKFQILPKDFSLATGELGPTLKLKRNVVYKKYENLIE 680
Query: 482 KFY 484
Y
Sbjct: 681 DMY 683
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQK-QEN 64
P+QIL +D TT+ G RI L PISVPGLL T +YP+ +AL E
Sbjct: 40 PDQILPADSFTTTKIDGHVRIQLNNEDFK---PISVPGLLSNTVRKYPNHIALAATPDET 96
Query: 65 GEWKKVTY 72
G K T+
Sbjct: 97 GHRKTYTF 104
>gi|380023570|ref|XP_003695591.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG2-like [Apis florea]
Length = 686
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 190/276 (68%), Gaps = 13/276 (4%)
Query: 158 FGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVD-----------PDEEG-NGEICLK 205
F +E G + +D ++ + +IPG + V PDE G
Sbjct: 48 FKTTEYNGCVRIQLNND-DVNSMPISIPGLMSNTVKKYSNHLALVARPDENGIRKTYTYS 106
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EYE+ V+TVA+AFLKLGLERYH VCI+GFN+PEW +++LGAIYAGGFA G+YTTN+PEAC
Sbjct: 107 EYESQVKTVARAFLKLGLERYHGVCILGFNSPEWLFANLGAIYAGGFAVGIYTTNNPEAC 166
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
HC V S ANI VVE+ KQLEKIL++K P LK IVQYEGKP++ ++SW++L+++G A
Sbjct: 167 QHCAVISKANIIVVENRKQLEKILQIKQNLPHLKVIVQYEGKPEQKDILSWNDLIKIGEA 226
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS 385
D L+ VL+TIA NECCTLV+TSGT G K VM+SHDN N + +L+ +
Sbjct: 227 ESDVKLNEVLKTIAVNECCTLVFTSGTVGNPKAVMISHDNFLSNVRSLSNSLELKEGCET 286
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLSH+AAQ VD+Y ++ +A T++FAD+NALK
Sbjct: 287 LVSYLPLSHVAAQVVDLYFMLYIAGTIYFADQNALK 322
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 103/143 (72%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q +K WIA++AKS +L + + + N + ++Y + ++L+ +K+K
Sbjct: 344 WEKIYEKMQAVAANNGFIKTWIASWAKSQALYYNINKMNGNDHKHWSYIIAKYLVFNKIK 403
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC++ +S AAP+S+E+K+YFLSLDIPI +V+GMSEC+GAHT++ P +FKL+ VG
Sbjct: 404 AALGLDRCKLCISAAAPLSSEIKQYFLSLDIPILDVYGMSECSGAHTLNTPLNFKLNSVG 463
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
R G TK+ +PD G GEICL
Sbjct: 464 RPSCGFNTKLYNPDSNGEGEICL 486
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+ AI RAN K IS+AQK+QKF+ LP DFSI TGELGPT+K+ + + K Y+++I+
Sbjct: 623 VYEEIDKAIKRANTKVISHAQKVQKFQILPHDFSIVTGELGPTLKIXKNIIYKMYENLIE 682
Query: 482 KFY 484
Y
Sbjct: 683 DMY 685
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQK-QEN 64
P+QIL +D TTE +G RI L V + P IS+PGL+ T +Y + +AL + EN
Sbjct: 39 PDQILPADSFKTTEYNGCVRIQLNNDDVNSMP-ISIPGLMSNTVKKYSNHLALVARPDEN 97
Query: 65 GEWKKVTYKLQTTGVK 80
G K TY + VK
Sbjct: 98 GIRKTYTYSEYESQVK 113
>gi|350419229|ref|XP_003492113.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like isoform 2
[Bombus impatiens]
Length = 693
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 132/229 (57%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 194 PDEEGNGEI-CLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
PDE G+ EYE ++ VAKAF+K GLER+H VCI+GFN+PEW +S+LGAIYAGG
Sbjct: 102 PDETGHRRTYTFTEYENQIKIVAKAFIKFGLERFHGVCILGFNSPEWLFSNLGAIYAGGI 161
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
A G+YTTN+P+AC HCL TS ANI VVED KQLEKIL+++ P LKAI+QY G P++
Sbjct: 162 AVGIYTTNTPDACQHCLQTSQANIVVVEDSKQLEKILQIRHNLPHLKAIIQYTGTPNEKD 221
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
V+SW++L+++G A D+ L+ +L+ IATNECCTLV+TSGT G K VMLSHDN+ N
Sbjct: 222 VLSWNDLIKIGEAESDDKLNEILKRIATNECCTLVFTSGTVGYPKAVMLSHDNLIHNVRS 281
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + FK ++A +IS+LPLSH+AAQ +DIY + ATL FAD+NALK
Sbjct: 282 MNRTFKFKTAYQHIISYLPLSHVAAQIIDIYYCIYTVATLHFADRNALK 330
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 115/191 (60%), Gaps = 15/191 (7%)
Query: 67 WKKVTYKLQT---TG-VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQ 122
W+K+ +KLQ+ TG +K I ++A S + + + N + + Y +WLI +K+K
Sbjct: 352 WEKIYFKLQSEINTGFIKSSIVSWATSQGYHYNVNKMNGNDHKHWGYIFAKWLIFNKIKT 411
Query: 123 AMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGR 182
A+GLDRC + AAP+ST +K YFLSLDIPI EV+GMSEC+G H +SAPD FKL VGR
Sbjct: 412 ALGLDRCHHCATAAAPLSTHIKEYFLSLDIPIFEVYGMSECSGGHILSAPDHFKLGSVGR 471
Query: 183 TIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
T+PG +TK+ +PD G GEIC+ R + +L + ++ + W +S
Sbjct: 472 TMPGLKTKLDNPDSNGEGEICMYG-----RHIFMGYLNEPEKTGEAL-----DGERWLHS 521
Query: 243 -DLGAIYAGGF 252
DLG I + GF
Sbjct: 522 GDLGKIDSNGF 532
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+ AI RAN KSISNAQ++QKF+ LP DFS TGELGPT+K+KR V KKY+++I+
Sbjct: 630 VYEEIDKAIKRANTKSISNAQRVQKFQILPKDFSHATGELGPTLKLKRNVVYKKYENLIE 689
Query: 482 KFY 484
Y
Sbjct: 690 DMY 692
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQK-QEN 64
P+QIL +D TT+ GR RI L + PISVPGLL T +YP+ +AL E
Sbjct: 49 PDQILPADSFTTTKIDGRVRIQLNDEDFN---PISVPGLLSNTVKKYPNHIALAATPDET 105
Query: 65 GEWKKVTY 72
G + T+
Sbjct: 106 GHRRTYTF 113
>gi|350419227|ref|XP_003492112.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like isoform 1
[Bombus impatiens]
Length = 684
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 132/229 (57%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 194 PDEEGNGEI-CLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
PDE G+ EYE ++ VAKAF+K GLER+H VCI+GFN+PEW +S+LGAIYAGG
Sbjct: 93 PDETGHRRTYTFTEYENQIKIVAKAFIKFGLERFHGVCILGFNSPEWLFSNLGAIYAGGI 152
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
A G+YTTN+P+AC HCL TS ANI VVED KQLEKIL+++ P LKAI+QY G P++
Sbjct: 153 AVGIYTTNTPDACQHCLQTSQANIVVVEDSKQLEKILQIRHNLPHLKAIIQYTGTPNEKD 212
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
V+SW++L+++G A D+ L+ +L+ IATNECCTLV+TSGT G K VMLSHDN+ N
Sbjct: 213 VLSWNDLIKIGEAESDDKLNEILKRIATNECCTLVFTSGTVGYPKAVMLSHDNLIHNVRS 272
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + FK ++A +IS+LPLSH+AAQ +DIY + ATL FAD+NALK
Sbjct: 273 MNRTFKFKTAYQHIISYLPLSHVAAQIIDIYYCIYTVATLHFADRNALK 321
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 115/191 (60%), Gaps = 15/191 (7%)
Query: 67 WKKVTYKLQT---TG-VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQ 122
W+K+ +KLQ+ TG +K I ++A S + + + N + + Y +WLI +K+K
Sbjct: 343 WEKIYFKLQSEINTGFIKSSIVSWATSQGYHYNVNKMNGNDHKHWGYIFAKWLIFNKIKT 402
Query: 123 AMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGR 182
A+GLDRC + AAP+ST +K YFLSLDIPI EV+GMSEC+G H +SAPD FKL VGR
Sbjct: 403 ALGLDRCHHCATAAAPLSTHIKEYFLSLDIPIFEVYGMSECSGGHILSAPDHFKLGSVGR 462
Query: 183 TIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
T+PG +TK+ +PD G GEIC+ R + +L + ++ + W +S
Sbjct: 463 TMPGLKTKLDNPDSNGEGEICMYG-----RHIFMGYLNEPEKTGEAL-----DGERWLHS 512
Query: 243 -DLGAIYAGGF 252
DLG I + GF
Sbjct: 513 GDLGKIDSNGF 523
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+ AI RAN KSISNAQ++QKF+ LP DFS TGELGPT+K+KR V KKY+++I+
Sbjct: 621 VYEEIDKAIKRANTKSISNAQRVQKFQILPKDFSHATGELGPTLKLKRNVVYKKYENLIE 680
Query: 482 KFY 484
Y
Sbjct: 681 DMY 683
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQK-QEN 64
P+QIL +D TT+ GR RI L + PISVPGLL T +YP+ +AL E
Sbjct: 40 PDQILPADSFTTTKIDGRVRIQLNDEDFN---PISVPGLLSNTVKKYPNHIALAATPDET 96
Query: 65 GEWKKVTY 72
G + T+
Sbjct: 97 GHRRTYTF 104
>gi|383861932|ref|XP_003706438.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Megachile
rotundata]
Length = 616
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/243 (57%), Positives = 172/243 (70%), Gaps = 1/243 (0%)
Query: 180 VGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEW 239
+ + P I PD + +EYE VRTVAKAFLKLGLERYH V IIGFN PEW
Sbjct: 10 MANSYPDRMALIARPDTKQKKSYTFREYEQEVRTVAKAFLKLGLERYHGVAIIGFNTPEW 69
Query: 240 FYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLK 299
F SDL AIYAGGFA G+YTTN+PEAC HC+ S +NI VVEDDKQLEKILK+K P LK
Sbjct: 70 FVSDLAAIYAGGFAVGVYTTNTPEACQHCIENSQSNIVVVEDDKQLEKILKIKDNLPFLK 129
Query: 300 AIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPV 359
AIV Y+ P + GV+SW +L+E+G+ D+ L+ VL+TIA NECCTL+YTSGT G K V
Sbjct: 130 AIVMYDDVPKEKGVLSWKDLLEIGQKESDDKLNEVLKTIAANECCTLIYTSGTVGKPKAV 189
Query: 360 MLSHDNITFNAACIIQYFKLESAALSV-ISFLPLSHIAAQTVDIYSVMTVAATLWFADKN 418
MLSHDN+ +A I+++ K V IS+LPLSH+AAQ +DIY M + T++FA K+
Sbjct: 190 MLSHDNLLQDARSILRFTKFSIDDKHVLISYLPLSHVAAQILDIYCTMLLGGTVYFAAKD 249
Query: 419 ALK 421
ALK
Sbjct: 250 ALK 252
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 97/144 (67%), Gaps = 5/144 (3%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q VK I ++AKS +L + L+ N ++ + Y RWL+LSKV+
Sbjct: 274 WEKIYSKMQEVARSNGFVKTLIGSWAKSQALYYNTNKLQGNDTKNWGYVFARWLVLSKVR 333
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC+V + AAP+S E+K+YF+SLDI I E +GMSEC+G H ++ + +KLDGVG
Sbjct: 334 AALGLDRCQVCFTAAAPLSREIKQYFMSLDILILEAYGMSECSGGHALNLNECYKLDGVG 393
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
T+PG T++ PD G GEIC++
Sbjct: 394 VTLPGFHTRLDKPDSSGEGEICMR 417
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A AAI AN K++SNAQK+QKF+ LP D SIPTGELGPT K++R + KKY+ +I+
Sbjct: 553 VYNAIDAAIKAANTKALSNAQKVQKFKILPHDLSIPTGELGPTYKIRRNIIYKKYEKLIE 612
Query: 482 KFYD 485
+ Y+
Sbjct: 613 EMYN 616
>gi|91076084|ref|XP_967873.1| PREDICTED: similar to AGAP008596-PA [Tribolium castaneum]
gi|270014586|gb|EFA11034.1| hypothetical protein TcasGA2_TC004625 [Tribolium castaneum]
Length = 657
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 164/221 (74%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I KEY VRT AKAF+KLGLER+H+VCI+GFN+PEWF SDL AI+AGG A G+YTTN
Sbjct: 73 KITYKEYYELVRTCAKAFIKLGLERHHAVCILGFNSPEWFISDLAAIFAGGIAVGIYTTN 132
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S EAC HC S ANI VV+D KQLEKIL +K++ P LKAI+QYEG P VISW++L+
Sbjct: 133 SSEACFHCANHSRANIIVVQDQKQLEKILAIKSRLPHLKAIIQYEGTPTSADVISWEDLL 192
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
+GR DE L+RVL+TI NECCTLVYTSGT G K VMLSHDN+T++A I + ++
Sbjct: 193 IIGRDQEDEDLERVLKTIGVNECCTLVYTSGTVGKPKAVMLSHDNLTWDALSICERLDVK 252
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLSH+AAQ DIY M A ++FAD NALK
Sbjct: 253 KGEEVIVSYLPLSHVAAQVTDIYIAMMYAVCIYFADANALK 293
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 134/246 (54%), Gaps = 37/246 (15%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+ Q VK+ +A++AKS +L +++ ++ + Y L LI KVK
Sbjct: 315 WEKMHEKMMQVAAQNGRVKKSLASWAKSQALHYHLNRIKGVNGSGWGYCLASSLIFKKVK 374
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+GL RC + +S AAP++ ++KRYFLS+D+PI E FGMSE +GAHT+ F L+ +G
Sbjct: 375 QALGLSRCTLFVSAAAPLAADIKRYFLSIDMPIMEAFGMSEASGAHTMCNMGSFGLETIG 434
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+PG +TKI++P E+G GEIC+ N R V +L +R + I ++ W +
Sbjct: 435 MALPGMKTKILNP-EDGQGEICM-----NGRHVFMGYLG---DREKTDEAI--DSEGWLH 483
Query: 242 S-DLGAIYAGGFAAGMYTT-------------NSPEACLHCLVTSD----ANICVVEDDK 283
S DLG I F +Y T N P + LV S+ +N+ +V D +
Sbjct: 484 SGDLGRIDENNF---IYITGRLKELIITAGGENIPPVPIEQLVKSELPHVSNVFLVGDKR 540
Query: 284 QLEKIL 289
+ +L
Sbjct: 541 KFLSVL 546
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A + +IDR N +++SNAQ+IQK LP DFS+ TGELGPTMKVKR V KY II
Sbjct: 593 KLLEALKESIDRVNQQAVSNAQRIQKLSILPVDFSVATGELGPTMKVKRNVVAAKYADII 652
Query: 481 DKFY 484
+K Y
Sbjct: 653 EKMY 656
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQ--PPISVPGLLGRTAAQYPDQVALCQKQE 63
P+QIL ++ TT P R+ + E G A + PP+S+PGLL RTA +PD AL K E
Sbjct: 9 PDQILPAEDSTTTSPDVPVRLRIPETGKAIETTPPVSIPGLLKRTATDFPDHPALAYKAE 68
Query: 64 NGEWKKVTYK 73
G+W K+TYK
Sbjct: 69 -GKWNKITYK 77
>gi|307188070|gb|EFN72902.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Camponotus floridanus]
Length = 689
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 162/217 (74%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EYE VRTVAKAFLKLGLERYHSVCI+GFN+PEWF +DL AIYAGGFA G+YTT+SP+A
Sbjct: 109 REYEQAVRTVAKAFLKLGLERYHSVCILGFNSPEWFITDLAAIYAGGFATGIYTTSSPDA 168
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
C +C S ANI VVED KQLEKIL+++ P LKA+VQY G P + ++SW++L+E+G+
Sbjct: 169 CQYCAEHSQANIIVVEDTKQLEKILQIRQNLPNLKAVVQYNGIPTEKDILSWNDLLEIGK 228
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
D L VL+TI NECCTLVYTSGT G K VMLSHDN+ + I ++ +
Sbjct: 229 QESDSKLLSVLKTIGANECCTLVYTSGTVGNPKAVMLSHDNLLHDVRMIFSAIQVNEKSE 288
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSH+AAQ DI + VA T++FADKNALK
Sbjct: 289 IVVSYLPLSHVAAQLCDIIGSVLVATTVYFADKNALK 325
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 36/202 (17%)
Query: 67 WKKVTYKLQ----TTGV-KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q + GV K +IA +AK+ L ++ + + ++Y +WL+ K+K
Sbjct: 347 WEKIYEKMQEKARSNGVIKTYIARWAKAQGLHYHTNKINGVDYKNWSYIFAKWLVFDKIK 406
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GL +CR+ ++ AAP+++++K+YFLSLDIPI E +GMSEC G HT+S +++LDGVG
Sbjct: 407 AALGLQKCRIFVTAAAPLNSDIKKYFLSLDIPIIEAYGMSECGGGHTLSNYTEYRLDGVG 466
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPE--- 238
T+ G TK+ + DE G GE+C+ R + +L NAPE
Sbjct: 467 TTLSGAYTKLDNIDEYGEGEVCMSG-----RHIFMGYL---------------NAPEKTA 506
Query: 239 -------WFYS-DLGAIYAGGF 252
W +S DLG I + G
Sbjct: 507 EAKDKNGWLHSGDLGKIDSNGI 528
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 49/63 (77%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+YK AI RAN ++ISNAQK+QKFE LP DFSIPTGELGPT+K+K+ V+K Y +ID
Sbjct: 626 IYKEIDKAIKRANEQAISNAQKVQKFEILPHDFSIPTGELGPTLKLKKNIVLKMYADLID 685
Query: 482 KFY 484
K Y
Sbjct: 686 KMY 688
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVAL 58
P+Q+L +D+ T E G+ RI L + G + P+S+PG+ +TA +YPD +AL
Sbjct: 41 PDQVLATDVDTTCEAKGKVRIKLDKNGYNSCIPMSIPGVFMKTANRYPDHIAL 93
>gi|321474364|gb|EFX85329.1| hypothetical protein DAPPUDRAFT_314088 [Daphnia pulex]
Length = 800
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 160/217 (73%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
K+Y +VR AKAF++LGLER+HSVCI+GFN+PEW +DL AI+AGGFAAG+YTTNS EA
Sbjct: 253 KQYLHDVRVCAKAFIRLGLERFHSVCILGFNSPEWIIADLAAIHAGGFAAGIYTTNSAEA 312
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
CLHC + A+I VVED KQLEKIL +K Q P LKAIVQY GKP GVI+W +LM LG
Sbjct: 313 CLHCALNGQADIIVVEDRKQLEKILSIKDQIPTLKAIVQYTGKPHVEGVITWSQLMHLGN 372
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
A PD + L+ +A N+CCTL+YTSGT G K VML+HDN+T+ + + Y L
Sbjct: 373 ATPDNVYEDRLKKLAVNQCCTLIYTSGTTGPPKGVMLNHDNLTWISNNLATYMNLRDGKD 432
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +S+LPLSH+AAQ DIY+ ++V T++FAD + LK
Sbjct: 433 TFLSYLPLSHVAAQITDIYAPLSVGGTVYFADPDVLK 469
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 95/144 (65%), Gaps = 6/144 (4%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q TTG+K+ IA ++KS L + +E S+P+ + L L+ KV+
Sbjct: 491 WEKIYEKMQAIGKQTTGIKKTIATWSKSVGLSYNRRRMEGRSSKPFGFALANALVFKKVR 550
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSA-PDDFKLDGV 180
+ +GLD+ RV LSGAAP+S E+ YF SLDIP +V+GMSE G H+++ ++L+
Sbjct: 551 EGLGLDKARVILSGAAPLSKEVAEYFTSLDIPPAQVYGMSESTGPHSINNITKGYQLNSA 610
Query: 181 GRTIPGTQTKIVDPDEEGNGEICL 204
G+++PG TKI +PD++GNGEI +
Sbjct: 611 GKSVPGCLTKIANPDKDGNGEILM 634
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
P+Q+ +D TT G ++ + E G+A+ PP+SVP LL RT A++ D ALC K++ G
Sbjct: 187 PDQLFPADSYTTTSATGAVKLKIDERGMASIPPLSVPTLLQRTVARHMDHPALCVKRD-G 245
Query: 66 EWKKVTYK 73
+W K TYK
Sbjct: 246 KWIKWTYK 253
>gi|307194580|gb|EFN76872.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Harpegnathos saltator]
Length = 687
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 162/217 (74%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EYE VRTVAKAFLKLGL+RYHSVCI+GFN P+WF +DL IYAGGFA G+YTTNSPE
Sbjct: 107 REYEQAVRTVAKAFLKLGLKRYHSVCILGFNCPQWFIADLATIYAGGFATGIYTTNSPEI 166
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
C +C S ANI VVED+KQL KILKVK+ P LKAI+QYEG P + V+SWD+L+E+G+
Sbjct: 167 CQYCAENSRANIIVVEDEKQLAKILKVKSSLPNLKAIIQYEGIPTEKDVLSWDDLLEIGK 226
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
D+ L L+ I NECCTLVYTSGT G K VMLSHDNI + ++ ++ +
Sbjct: 227 KESDDKLLSTLKLIGINECCTLVYTSGTCGYPKAVMLSHDNILHCVKGVCKFLEMTNKTE 286
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSH+AAQ D+ + +A+T++FADKNALK
Sbjct: 287 VVVSYLPLSHVAAQVCDLMLGIYIASTIYFADKNALK 323
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
Query: 68 KKVTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGL 126
+K+ K ++ G +K WIA +AK+ L ++ + + + Y +WL+ K+K A+GL
Sbjct: 350 EKMMEKARSNGAIKTWIAKWAKAQGLYYHTNKMNNVDDKHWGYIFAKWLVFDKIKAALGL 409
Query: 127 DRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPG 186
+RCR+ S AAPI+ ++K++FLSLD+P+ E +GMSE G HT+ +F L GVG +P
Sbjct: 410 NRCRIFASAAAPINIDIKKFFLSLDMPLIEAYGMSESGGPHTLIDLKNFTLQGVGIALPE 469
Query: 187 TQTKIVDPDEEGNGEICL 204
TK+ + +E GEIC+
Sbjct: 470 MYTKLDNINEHSEGEICM 487
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y+ AI RAN+ +ISNAQK+QKFE LP DFSI TGELGPT+K+K+ ++K Y+ +I+
Sbjct: 624 IYEEIDKAIKRANMHAISNAQKVQKFEILPHDFSISTGELGPTLKLKKYVIIKMYKDLIE 683
Query: 482 KFY 484
K Y
Sbjct: 684 KMY 686
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVAL 58
P+Q+L +D+ T E +G+ RI L + P+S+P +L +TA YPD +AL
Sbjct: 39 PDQVLPADVDTTCEANGKVRIKLDSNKHDSFVPVSIPSVLMKTAQYYPDHIAL 91
>gi|321474592|gb|EFX85557.1| hypothetical protein DAPPUDRAFT_187637 [Daphnia pulex]
Length = 641
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 160/217 (73%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
K+Y +VR AKAF++LGLER+HSVCI+GFN+PEW +DL AI+AGGFAAG+YTTNS EA
Sbjct: 40 KQYLHDVRVCAKAFIRLGLERFHSVCILGFNSPEWIIADLAAIHAGGFAAGIYTTNSAEA 99
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
CLHC + A+I VVED KQLEKIL +K Q P LKAIVQY GKP GVI+W +LM LG
Sbjct: 100 CLHCALNGQADIIVVEDRKQLEKILSIKDQIPTLKAIVQYTGKPHVEGVITWSQLMHLGN 159
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
A PD + L+ +A N+CCTL+YTSGT G K VML+HDN+T+ + + Y L
Sbjct: 160 ATPDNVYEDRLKKLAVNQCCTLIYTSGTTGPPKGVMLNHDNLTWISHNLATYMNLRDGKD 219
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +S+LPLSH+AAQ DIY+ ++V T++FAD + LK
Sbjct: 220 TFLSYLPLSHVAAQITDIYAPLSVGGTVYFADPDVLK 256
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 96/144 (66%), Gaps = 6/144 (4%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q TTG+K+ IA ++KS L + +E S+P+ + L L+ KV+
Sbjct: 278 WEKIYEKMQAIGKQTTGIKKTIATWSKSVGLSYNRRRMEGRSSKPFGFALANALVFKKVR 337
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV-SAPDDFKLDGV 180
+ +GLD+ RV LSGAAP+S E+ YF SLDIPI EV+GMSE G H++ + ++L+
Sbjct: 338 EGLGLDKARVILSGAAPLSKEVAEYFTSLDIPILEVYGMSESTGPHSINNITKGYQLNSA 397
Query: 181 GRTIPGTQTKIVDPDEEGNGEICL 204
G+++PG TKI +PD++GNGEI +
Sbjct: 398 GKSVPGCLTKIANPDKDGNGEILM 421
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 410 ATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR 469
A L D A+K K AAI++AN +IS AQ++QK+ LP DFSIP GELGPTMK+KR
Sbjct: 566 AALTGQDAEAVKFVKVIDAAIEKANRNAISAAQRVQKWTILPVDFSIPGGELGPTMKMKR 625
Query: 470 PFVVKKYQSIIDKFY 484
V KKY +I++FY
Sbjct: 626 SCVAKKYADVIERFY 640
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 33 VAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKVTYK 73
+A+ PP+SVP LL RT A++ D ALC K++ G+W K TYK
Sbjct: 1 MASIPPLSVPTLLQRTVARHMDHPALCVKRD-GKWIKWTYK 40
>gi|357622046|gb|EHJ73666.1| hypothetical protein KGM_01876 [Danaus plexippus]
Length = 690
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/220 (58%), Positives = 168/220 (76%), Gaps = 3/220 (1%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y+ VRT+AKAFLK+GLER+HSVCI+GFN+ EW+ +DL AI+AGG+AAG+YTTNS EA
Sbjct: 83 RQYQERVRTIAKAFLKIGLERFHSVCILGFNSEEWYIADLAAIHAGGYAAGIYTTNSAEA 142
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDELMEL 322
C HCL +S ANIC V+D KQL+KIL ++ + LKAIVQ+EG D PGV SWD+LME+
Sbjct: 143 CFHCLESSRANICAVQDKKQLDKILSIQGRLKHLKAIVQWEGPVDTSVPGVYSWDQLMEM 202
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLES 381
G PD L+ +L++IA NECCTLVYTSGT G K VMLSHDN+T++A I + L+
Sbjct: 203 GAKEPDTQLNNILKSIAVNECCTLVYTSGTVGPPKAVMLSHDNLTWDAFAISERCGDLKP 262
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLSH+AAQ VDIY+ +T A ++FA +ALK
Sbjct: 263 TLDKIVSYLPLSHVAAQVVDIYATLTNAIEVYFARPDALK 302
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 28/167 (16%)
Query: 67 WKKVTYKLQTTGV-----KRWIANYAKSTSLQHYMAYLEKNVSE-PYT------------ 108
W+K+ K+ G K+ IA +AK +H++A + +S P
Sbjct: 324 WEKMHEKIMAVGAANSSFKKSIAMWAKEKGTKHHLARINGALSSSPRVLPIDFSLLELLK 383
Query: 109 ---------YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFG 159
Y+L + LI SKV+ ++GLDRC ++ AAP+S E+K++FLSLDIPI + FG
Sbjct: 384 YWQTGTTCGYKLAKSLIFSKVRDSLGLDRCLTFVTAAAPLSPEIKKFFLSLDIPIMDAFG 443
Query: 160 MSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP-DEEGNGEICLK 205
MSE AGAHT+S F LD G + GT+T+ D G GEI ++
Sbjct: 444 MSEAAGAHTLSIYPKFSLDSSGEILDGTETRFGDSMSVNGPGEIQMR 490
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 49/63 (77%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA + I RAN +ISNAQK+QKF LPADFS+ TGELGPT+K+KR V +KY+ II+
Sbjct: 626 VYKAIEDGITRANKHAISNAQKVQKFAILPADFSMNTGELGPTLKIKRNVVYEKYKDIIE 685
Query: 482 KFY 484
FY
Sbjct: 686 DFY 688
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
P+Q++ D P G ++ +G GVAA+PPISVPGLL RT A+YPD A K+ +G
Sbjct: 16 PDQVIPVDHYICCTPGGHVKLRMGSRGVAAEPPISVPGLLSRTVARYPDATAFATKKSDG 75
Query: 66 EWKKVTYK 73
+W + TY+
Sbjct: 76 KWHRTTYR 83
>gi|332020088|gb|EGI60534.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Acromyrmex echinatior]
Length = 666
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 129/251 (51%), Positives = 173/251 (68%), Gaps = 12/251 (4%)
Query: 183 TIPGTQTK-----------IVDPDEEGNGEI-CLKEYEANVRTVAKAFLKLGLERYHSVC 230
+IPG T+ + PD G +EYE+ V+TVAKAFLKLGLERYHSVC
Sbjct: 52 SIPGVLTRTAKLYSDHIALVSAPDANGKRTTYTFQEYESIVKTVAKAFLKLGLERYHSVC 111
Query: 231 IIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILK 290
I+GFN+PEWF ++L IYAGG A G+YTTNSPEAC +C S ANI VVED+KQL+KIL+
Sbjct: 112 IMGFNSPEWFITELATIYAGGLATGIYTTNSPEACQYCAEHSRANIIVVEDEKQLQKILQ 171
Query: 291 VKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTS 350
+K P LKAIVQY+GKP + ++SW++L+ +G+ ++ L VL+TIA NECC LVYTS
Sbjct: 172 IKHNLPHLKAIVQYDGKPTEKNILSWNDLLNIGKTESEDKLSYVLKTIAVNECCILVYTS 231
Query: 351 GTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAA 410
GT G K VML+HDNI + +++ + ++S+LPLSH+AAQ +D+ + + +A
Sbjct: 232 GTVGNPKAVMLNHDNILHGIRAVTSTLQIKEKSEVIVSYLPLSHVAAQLIDVIANIMLAT 291
Query: 411 TLWFADKNALK 421
T+ FAD ALK
Sbjct: 292 TVCFADSGALK 302
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q +K WIA +AK+ L +Y + + + Y +WL+ KVK
Sbjct: 324 WEKIYEKMQEKAKNNGVIKTWIAKWAKAQGLHYYTNKINGIDYKHWGYVFAKWLVFDKVK 383
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GL++C + ++ AAP++ ++K+YFLSLD+ I +V+GMSE G HT++ ++ L VG
Sbjct: 384 TALGLNKCHMFITAAAPLNIDIKKYFLSLDVSILDVYGMSESTGPHTITDCKEYNLHSVG 443
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
R + G TK+ + DE G GE+C+
Sbjct: 444 RPMSGVYTKLDNIDEHGEGEVCM 466
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y+ AI R+N++++SNAQK+QKFE LP DFSIPTGELGPT+K+K+ V K Y +ID
Sbjct: 603 IYEEINEAIKRSNMQAVSNAQKVQKFEILPHDFSIPTGELGPTLKLKKNVVQKMYADLID 662
Query: 482 KFYD 485
K Y+
Sbjct: 663 KMYE 666
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQE-N 64
P+Q+L +D+ T G+ RI L + + P+S+PG+L RTA Y D +AL + N
Sbjct: 18 PDQVLPADVDTTCNVDGKVRIKLDSNELNSYMPVSIPGVLTRTAKLYSDHIALVSAPDAN 77
Query: 65 GEWKKVTYKLQ 75
G K+ TY Q
Sbjct: 78 G--KRTTYTFQ 86
>gi|332020087|gb|EGI60533.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Acromyrmex echinatior]
Length = 672
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/277 (48%), Positives = 181/277 (65%), Gaps = 21/277 (7%)
Query: 166 AHTVSAPDD---FKLDGVG------RTIPG--TQTKIVDPDE-------EGNGE---ICL 204
A T PD KLD G +IPG T+T + PD + NG+
Sbjct: 33 ADTTCNPDGRVRIKLDNNGSNSYQPESIPGVFTRTAKLYPDHIALVSRPDVNGKRTTYTF 92
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EYE+ VR VAKAFLKLGLERYHSVCIIGFN+PEW ++L IYAGG A G+Y TNSPEA
Sbjct: 93 QEYESIVRIVAKAFLKLGLERYHSVCIIGFNSPEWIIAELATIYAGGIAVGVYITNSPEA 152
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
C +C S ANI VVED+KQL+KIL++K P LKAI+QY+G P + ++SW +L+++G+
Sbjct: 153 CQYCAEHSRANIIVVEDEKQLQKILQIKHNLPYLKAIIQYDGIPTEKDILSWGDLLDIGK 212
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ L VL+TI NECC LVYTSGT G K VML+HDN+ ++ ++ +
Sbjct: 213 RESENKLSHVLKTIGINECCVLVYTSGTIGHPKAVMLNHDNLLHGIWGLLPVLHMKKKSE 272
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLSHIAAQ +D+ + +A+T++FAD +ALK
Sbjct: 273 VIVSYLPLSHIAAQLIDVILNIMLASTVYFADPSALK 309
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 91/143 (63%), Gaps = 6/143 (4%)
Query: 67 WKKVTYKLQ----TTGV-KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q + GV K WIA +AK +L +Y + + + Y +WL+ KVK
Sbjct: 331 WEKIYKKMQEKTDSNGVIKTWIAKWAKEQALYYYTNKINGINYKQWGYLFAKWLVFDKVK 390
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GL++C + ++GAAPI+ ++K+YFLSLDIP+ EV+GMSE G T++ + + GVG
Sbjct: 391 AALGLNKCYIYITGAAPINIDIKKYFLSLDIPLIEVYGMSESCGCQTINDL-KYSMVGVG 449
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ +PG K+ + +E GE+C+
Sbjct: 450 KPLPGLYIKLDNINEHDEGEVCM 472
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 298 LKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGAS- 356
L A Q E DK G W +LG+ LD T LV TSG E +
Sbjct: 482 LNAPKQTEEAKDKNG---WLHSGDLGK------LDSKGNLFITGRIKELVITSGGENVAS 532
Query: 357 ---KPVMLSHDNITFNAACIIQYFKLESAALSVISFL------PLSHIAAQTVD-IYSVM 406
+ +LS + NA I K +++ S + PL +A + +S+
Sbjct: 533 YNIEQAILSELSYLSNAMVIGDQKKYLIVLVTLKSDMNEETGAPLDTLAPDVLKWAHSIG 592
Query: 407 TVAATLW-FADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTM 465
+ A T+ + + +Y AI RAN+++ISNAQK+QKFE LP DFSIPTGELGPT+
Sbjct: 593 SSAKTVTEVINSRDVAIYGEIDKAIKRANMQAISNAQKVQKFEILPHDFSIPTGELGPTL 652
Query: 466 KVKRPFVVKKYQSIIDKFYD 485
K+K+ V K Y +IDK Y+
Sbjct: 653 KLKKNVVQKMYADLIDKMYE 672
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQE-N 64
P+QIL +D T P GR RI L G + P S+PG+ RTA YPD +AL + + N
Sbjct: 25 PDQILFTDADTTCNPDGRVRIKLDNNGSNSYQPESIPGVFTRTAKLYPDHIALVSRPDVN 84
Query: 65 GEWKKVTYKLQ 75
G K+ TY Q
Sbjct: 85 G--KRTTYTFQ 93
>gi|332020089|gb|EGI60535.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Acromyrmex echinatior]
Length = 649
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/265 (49%), Positives = 173/265 (65%), Gaps = 18/265 (6%)
Query: 175 FKLDGVGR------TIPGTQTK-----------IVDPDEEGNG-EICLKEYEANVRTVAK 216
KLD G +IPG T+ + PD G +EYE+ + VAK
Sbjct: 22 IKLDSNGSNSCIPVSIPGVLTRTAKLYPNHIALVSRPDTNGKRITYTFQEYESVIIIVAK 81
Query: 217 AFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANI 276
AFLKLGLER+HSVCI+GFN+PEWF +DL IYAGG A G+Y TNSPEAC +C S ANI
Sbjct: 82 AFLKLGLERHHSVCIMGFNSPEWFIADLATIYAGGIATGIYVTNSPEACQYCAEHSRANI 141
Query: 277 CVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLE 336
VVE++ QL+KIL++K + LKAIVQY G P K V+SWD+L+++G+ ++ L VL+
Sbjct: 142 IVVENETQLQKILQIKHKLTHLKAIVQYNGIPTKKDVLSWDDLLDIGKKESEDKLLSVLK 201
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIA 396
TI NECC LVYTSGT G K VML+HDN+ F ++ ++ + ++S+LPLSHIA
Sbjct: 202 TIGINECCILVYTSGTVGNPKAVMLNHDNVLFGIRALLPMLHIKEKSEVIVSYLPLSHIA 261
Query: 397 AQTVDIYSVMTVAATLWFADKNALK 421
Q +DI + +A+T++FAD NALK
Sbjct: 262 GQLIDIIINIMLASTVYFADPNALK 286
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 97/143 (67%), Gaps = 6/143 (4%)
Query: 67 WKKVTYKLQ----TTGV-KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ + GV K WIA +AK+ +L +Y + + ++Y +WL+ KVK
Sbjct: 308 WEKIYEKMEDKARSNGVIKTWIAEWAKAQALHYYTNKINGIDYKHWSYVFAKWLVFDKVK 367
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GL++C++ ++ AAP++ +K+YFLSLDIP+ E++GMSEC G HT+ + + + GVG
Sbjct: 368 AALGLNKCQIFITAAAPLNINIKKYFLSLDIPLLEIYGMSEC-GGHTLIDINKYSMGGVG 426
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+T+PG TK+ + DE G GEIC+
Sbjct: 427 KTLPGLCTKLYNIDEHGEGEICM 449
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y+ AI RAN+++ISNAQK+QKFE LP DFSIPTGELGPT+K+K+ V K Y +ID
Sbjct: 586 IYEEIDKAIKRANMQAISNAQKVQKFEILPHDFSIPTGELGPTLKLKKNVVQKMYVDLID 645
Query: 482 KFYD 485
K Y+
Sbjct: 646 KMYE 649
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQE-N 64
P+QIL +D+ T GR RI L G + P+S+PG+L RTA YP+ +AL + + N
Sbjct: 2 PDQILSTDIDTTCNADGRVRIKLDSNGSNSCIPVSIPGVLTRTAKLYPNHIALVSRPDTN 61
Query: 65 GEWKKVTYKLQ 75
G K++TY Q
Sbjct: 62 G--KRITYTFQ 70
>gi|348535644|ref|XP_003455309.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Oreochromis niloticus]
Length = 737
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y R AK+FLKLGLERYH V I+GFN+ EWF SD+G I AGG AAG+YTTNSPEAC
Sbjct: 152 QYYEQCRAAAKSFLKLGLERYHGVGILGFNSAEWFISDIGCILAGGLAAGIYTTNSPEAC 211
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDELMELG 323
+ +AN+ VVE+ KQL+KIL+VK P L+AIVQY+G+ + P + +W+E M+LG
Sbjct: 212 QYVAANCEANVLVVENQKQLDKILQVKDHLPHLRAIVQYKGELQQKAPFLYTWEEFMKLG 271
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
PDE L+ V++++ NECCTL+YTSGT G K VMLSHDNIT+ A K +
Sbjct: 272 EDVPDEQLNAVIDSLRPNECCTLIYTSGTTGNPKGVMLSHDNITWTAHMGCTILKAKGGE 331
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLSH+AAQ VDI+ M A T++FAD +ALK
Sbjct: 332 EILVSYLPLSHVAAQMVDIWVCMGFAGTIYFADPDALK 369
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 92/143 (64%), Gaps = 6/143 (4%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ G +K+ +A++AKS LQ+ + + P+ + L L+ KV+
Sbjct: 391 WEKIEEKMKAAGAKASPMKKRVADFAKSIGLQYSYSVMNGKNQVPWGFMLANNLVFKKVR 450
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC++ +GAAPI+ + YF+SL+IP+ E++GMSE G HTVS +++++ G
Sbjct: 451 AALGLDRCKICCTGAAPITKDTLDYFMSLNIPVKELYGMSESCGPHTVSI-NEYRVTSCG 509
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ + G + K+V+ D +GNGEIC
Sbjct: 510 KVMIGCKVKLVNTDADGNGEICF 532
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y A QA I+R N +S SNAQK+QK++ + DFS+ GELGPTMK++RP VVK YQ I+
Sbjct: 668 IYSAIQAGIERVNARSTSNAQKVQKWDIVERDFSVTGGELGPTMKLRRPIVVKMYQEKIN 727
Query: 482 KFYDV 486
+ Y V
Sbjct: 728 EMYAV 732
>gi|348515289|ref|XP_003445172.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Oreochromis niloticus]
Length = 743
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/233 (52%), Positives = 162/233 (69%), Gaps = 7/233 (3%)
Query: 196 EEGNGEICLK--EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
+EG+ + LK +Y RT AK+FLKLGLERYH V I+GFN+ EWF +D+GAI AGGFA
Sbjct: 129 KEGDQQKSLKYKDYYQTCRTAAKSFLKLGLERYHGVGILGFNSVEWFVTDIGAILAGGFA 188
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKP 311
G+YTTNSPEAC + S ANI VVE+ KQL+KIL+++ + P LKAIVQY E K +P
Sbjct: 189 VGIYTTNSPEACQYVAENSKANIIVVENHKQLQKILQIEDKLPHLKAIVQYKDELKEKRP 248
Query: 312 GVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
+ +W E +ELGR PD LD ++ + N+CC+L+YTSGT G K VMLSHDN+T+ A
Sbjct: 249 NLYTWAEFLELGRDEPDAPLDAIIASQKPNQCCSLIYTSGTTGQPKGVMLSHDNLTWTAY 308
Query: 372 CIIQYFKLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ L +A+ + V+S+LPLSHIAAQ VDI+ M + +FA +ALK
Sbjct: 309 STSKHVNLTAASQAQEVVVSYLPLSHIAAQMVDIWITMKIGGVTYFAQPDALK 361
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 19/195 (9%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNV---SEPYTYRLVRWLILS 118
W+K+ K++ G V+R +A +AK L+ ++ L +N S P +Y + + L+
Sbjct: 383 WEKMQEKMKAVGAKSSTVRRKVAAWAKDVGLRTNLSKLNQNSAPGSAPVSYHIAKKLVFK 442
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
KV++A+GLDRC +GAAPI+ + +FLSL+IP+CE++GMSE +G HT+S D F+L
Sbjct: 443 KVRKALGLDRCTKCYTGAAPITKDTLEFFLSLNIPLCELYGMSESSGPHTISRHDAFRLT 502
Query: 179 GVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPE 238
G +PG +TK+ + DEEGNGEIC R + +L + + + +A
Sbjct: 503 SCGIELPGCKTKLHNKDEEGNGEICFWG-----RHIFMGYLNMPDKTEEA-----LDAEG 552
Query: 239 WFYS-DLGAIYAGGF 252
W +S DLG GF
Sbjct: 553 WLHSGDLGKQDENGF 567
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V A Q I R N S SNAQ+IQK+ L DFS+ GELGPTMK+KRP VVK Y+ ID
Sbjct: 665 VNAAIQEGIKRVNENSTSNAQRIQKWVILDRDFSVGGGELGPTMKLKRPVVVKMYKEQID 724
Query: 482 KFY 484
FY
Sbjct: 725 NFY 727
>gi|410923597|ref|XP_003975268.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Takifugu
rubripes]
Length = 653
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 161/229 (70%), Gaps = 3/229 (1%)
Query: 196 EEGNG-EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
EEG ++ ++Y R AK+FLKLGLERYH V I+GFNAPEWF SD+G I AGG A
Sbjct: 59 EEGQWVKLTYRQYYQQCRAAAKSFLKLGLERYHGVGILGFNAPEWFISDVGCILAGGLAT 118
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPG 312
G+YTTNSPEAC + +AN+ VVE+ QL+KILKVK Q P LKAIVQY+G K P
Sbjct: 119 GIYTTNSPEACQYVAANCEANVLVVENQAQLDKILKVKDQLPHLKAIVQYKGSLKQKLPF 178
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ +W+E M+LG +E L+ V++++ NECC+L+YTSGT G K VMLSHDN+T+ A+
Sbjct: 179 LYTWEEFMKLGEEVSEEQLNAVIDSLRANECCSLIYTSGTTGNPKGVMLSHDNLTWTASA 238
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
K + A +IS+LPLSH+AAQ +I+ + +A+T++FA+ +ALK
Sbjct: 239 TQDKLKFKEAGEVLISYLPLSHMAAQMFEIWISIWMASTVYFAEPDALK 287
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 157/312 (50%), Gaps = 44/312 (14%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ G K + +A++AKS LQ+ + + + P+ Y L L+L KV
Sbjct: 309 WEKMQEKMKAVGAKASPMRKRVADWAKSVGLQYSYSAMNGHNVVPWGYTLANNLVLKKVH 368
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRCR+S +GAAPIS E YF+SL+IPI E++GMSE +G H VS +++++ G
Sbjct: 369 AALGLDRCRISATGAAPISKETLNYFMSLNIPIMEMYGMSESSGPHYVSCNEEYRITSCG 428
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+ +PDE+GNGEICL R + +L + + +V + W Y
Sbjct: 429 KALPGCKIKLDNPDEDGNGEICLWG-----RNIFMGYLNMPDKTAEAV-----DQEGWLY 478
Query: 242 S-DLGAIYAGGFAAGMYTTNSPEACLHCLVTS--------------DANICVVEDDKQLE 286
S DLG GF +Y T + ++T+ A + ++ + L
Sbjct: 479 SGDLGKHDQDGF---LYITGRIK---ELIITAGGENIPPVPIEEALKAEVPIISNAMLLG 532
Query: 287 KILKVKAQCPKLKAIVQYEGKP-DKPGVISWDELMELGRAAPDESLDRVLETIATNECCT 345
LK + LK +V G+P DK + D +LG A +V E IA E
Sbjct: 533 DKLKFLSMLVTLKCVVNDSGEPTDKLSPEALDVCRQLGITA-----TKVSEIIANRE--P 585
Query: 346 LVYTSGTEGASK 357
VY S EG +
Sbjct: 586 AVYNSIQEGMER 597
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY + Q ++R N ++ SNAQK QKF L DFS+ GELGPTMK++RP V+K YQ I+
Sbjct: 587 VYNSIQEGMERVNARATSNAQKAQKFTILERDFSVGGGELGPTMKLRRPIVMKMYQEKIN 646
Query: 482 KFY 484
+ Y
Sbjct: 647 EMY 649
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 12 SDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKVT 71
+D L++T R+ + +G A++PP+++ + T Y D AL K+E G+W K+T
Sbjct: 9 ADQLWSTSRDQAVRLRMEGSGPASRPPLTIHQMFLGTLENYGDHPALVYKEE-GQWVKLT 67
Query: 72 YK 73
Y+
Sbjct: 68 YR 69
>gi|432872873|ref|XP_004072167.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Oryzias
latipes]
Length = 679
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 126/259 (48%), Positives = 168/259 (64%), Gaps = 4/259 (1%)
Query: 165 GAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLE 224
G+ T L+ V R+ G QT +V ++ + ++Y R AK+FLKLGLE
Sbjct: 55 GSETPVTIHQMFLETVERS--GDQTALVFKEDGQTASLTWRQYYEQCRAAAKSFLKLGLE 112
Query: 225 RYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQ 284
R+H V I+GFN+PEWF SD+G I+AGG AAG+YTTNSPEAC + +ANI VVE+ KQ
Sbjct: 113 RFHGVGILGFNSPEWFISDIGCIFAGGLAAGIYTTNSPEACQYVAANCEANILVVENQKQ 172
Query: 285 LEKILKVKAQCPKLKAIVQYEGKPDKPGVI--SWDELMELGRAAPDESLDRVLETIATNE 342
L+KIL+VK Q P LKAI+QY+GK + I SW+E M++G DE L+ V+++ NE
Sbjct: 173 LDKILQVKDQLPHLKAIIQYKGKLQQKTSILYSWEEFMKVGEDVSDEQLNAVIDSQRANE 232
Query: 343 CCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDI 402
CCTL+YTSGT G K VMLS DNIT+ A +IS+LPLSH+AAQ VDI
Sbjct: 233 CCTLIYTSGTTGNPKGVMLSQDNITWTARISSGLICKNYGQEILISYLPLSHVAAQMVDI 292
Query: 403 YSVMTVAATLWFADKNALK 421
+ M+ + T +FA+ +ALK
Sbjct: 293 WISMSFSGTTYFAEPDALK 311
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 95/143 (66%), Gaps = 6/143 (4%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++ G +K+ +A++AKS LQ+ + +E P+ + L L+ KV+
Sbjct: 333 WEKMQEGMRAGGEKASPLKKRVADWAKSIGLQYNYSAMEGENLVPWGFMLANNLVFKKVR 392
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRCR +GAAPI+ + YFLSL+IP+ E++GMSE +G HTVS D++++ G
Sbjct: 393 AALGLDRCRYCFTGAAPITKDTLEYFLSLNIPVKELYGMSESSGPHTVSI-DEYRIGSCG 451
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ IPG++ K+ +PDEEGNGE+C
Sbjct: 452 KVIPGSKIKLNNPDEEGNGEVCF 474
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 391 PLSHIAAQTVDIYSVMTVAATLWFADKNALK---VYKATQAAIDRANLKSISNAQKIQKF 447
PL+ ++++ +D +V AT ++ A K +YKA Q IDR N +S SNAQKIQK+
Sbjct: 577 PLNELSSEVLDFCRRHSVTATK-VSEITANKEPAIYKAIQEGIDRVNARSTSNAQKIQKW 635
Query: 448 EFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
L DFS+ GELGPT+K++RP VVK YQ I++ Y
Sbjct: 636 VVLERDFSVVGGELGPTLKLRRPIVVKMYQEKINELY 672
>gi|410929473|ref|XP_003978124.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Takifugu
rubripes]
Length = 765
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 151/222 (68%), Gaps = 5/222 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EY R AK+FLKLGLER H V I+GFN+ EWF SD+GAI AGGFA G+YTTNSPEA
Sbjct: 164 REYYQTCRAAAKSFLKLGLERCHGVGILGFNSAEWFISDIGAILAGGFAVGIYTTNSPEA 223
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDELMEL 322
C + ANI VVE+ KQL+KIL+V+ Q P LKAIVQY+ K +P + SW E MEL
Sbjct: 224 CQYVAENCKANIIVVENHKQLQKILQVEDQLPHLKAIVQYKDALKEKRPNLYSWAEFMEL 283
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G+ PD LD ++ + N+CCTL+YTSGT G K VMLSHDN+ + A I + +L A
Sbjct: 284 GQNEPDAPLDAIISSQKPNQCCTLIYTSGTTGQPKGVMLSHDNLMWTALSTISHVRLADA 343
Query: 383 ALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+S V+S+LPLSHIAAQ VD++ M V FA +ALK
Sbjct: 344 TVSQEVVVSYLPLSHIAAQMVDMWITMRVGGLTHFAQPDALK 385
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 93/145 (64%), Gaps = 7/145 (4%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVS--EPYTYRLVRWLILSK 119
W+K+ +++ G V+R +A +AK L + MA + + +Y++ + L+ K
Sbjct: 407 WEKMQERMKAVGAKSSAVRRKVAAWAKDVGLHNNMARMNHGATGQTSLSYQIAKKLVFKK 466
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG 179
V++A+GLDRC +GAAPI+ + +FLSLDIP+ E++GMSE +G HT+S P+ FKL
Sbjct: 467 VRKALGLDRCTKCYTGAAPITKDTLEFFLSLDIPLYELYGMSESSGPHTISIPEAFKLTS 526
Query: 180 VGRTIPGTQTKIVDPDEEGNGEICL 204
G +PG +TK+ +PDE+G GEIC
Sbjct: 527 CGVALPGCKTKLHNPDEDGVGEICF 551
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q I+R N KS SNAQ+IQK+ L DFSI +GELGPTMK+KRP +K Y+ I+
Sbjct: 688 VYAAIQEGINRVNEKSASNAQRIQKWTVLGRDFSITSGELGPTMKLKRPEALKIYKEEIE 747
Query: 482 KFY 484
+FY
Sbjct: 748 EFY 750
>gi|62205116|gb|AAH92725.1| Wu:fk81d02 protein, partial [Danio rerio]
Length = 525
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 150/221 (67%), Gaps = 5/221 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY + RT AK+FLKLGLERYH V I+GFN+ EWF +D+ AI AGGFA G+YTTNSPEAC
Sbjct: 141 EYYKSCRTAAKSFLKLGLERYHGVGILGFNSTEWFIADIAAILAGGFAVGIYTTNSPEAC 200
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELG 323
+ ANI VVE+ KQL+KIL+++ + P LKAI+QY E K KP + +W E MELG
Sbjct: 201 QYVAENCQANILVVENHKQLQKILQIQDKLPHLKAIIQYKDELKEKKPNLYTWAEFMELG 260
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA- 382
R PD LD ++ + N+CCTL+YTSGT G K VMLSHDN+T+ A Q+ L A
Sbjct: 261 RDEPDTQLDDIISSQKPNQCCTLIYTSGTTGQPKGVMLSHDNLTWTAVATSQHVSLNDAD 320
Query: 383 --ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +DI+ M +FA +ALK
Sbjct: 321 KLQEVVVSYLPLSHIAAQMIDIWLPMKAGGVTYFAQPDALK 361
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 91/138 (65%), Gaps = 7/138 (5%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLE--KNVSEPYTYRLVRWLILSK 119
W+K+ K+++ G V+R +A++AK LQ + +E N +P YRL + L+ K
Sbjct: 383 WEKMQEKMKSIGAKSSTVRRKVASWAKDVGLQTNLNKMELGSNSRKPLNYRLAKHLVFRK 442
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG 179
V++A+GLDRC +GAAPI+ + +FLSLDIP+ E++GMSE +G HT++ + F+L
Sbjct: 443 VRKALGLDRCTRCYTGAAPITKDTLEFFLSLDIPLFELYGMSESSGPHTITQANAFRLTS 502
Query: 180 VGRTIPGTQTKIVDPDEE 197
G+ IPG +TK+ +PD+E
Sbjct: 503 CGKVIPGCKTKLSNPDDE 520
>gi|256418951|ref|NP_001119851.1| long-chain-fatty-acid--CoA ligase ACSBG2 [Danio rerio]
Length = 752
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 150/221 (67%), Gaps = 5/221 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY + RT AK+FLKLGLERYH V I+GFN+ EWF +D+ AI AGGFA G+YTTNSPEAC
Sbjct: 151 EYYKSCRTAAKSFLKLGLERYHGVGILGFNSTEWFIADIAAILAGGFAVGIYTTNSPEAC 210
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELG 323
+ ANI VVE+ KQL+KIL+++ + P LKAI+QY E K KP + +W E MELG
Sbjct: 211 QYVAENCQANILVVENHKQLQKILQIQDKLPHLKAIIQYKDELKEKKPNLYTWAEFMELG 270
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA- 382
R PD LD ++ + N+CCTL+YTSGT G K VMLSHDN+T+ A Q+ L A
Sbjct: 271 RDEPDTQLDDIISSQKPNQCCTLIYTSGTTGQPKGVMLSHDNLTWTAVATSQHVSLNDAD 330
Query: 383 --ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +DI+ M +FA +ALK
Sbjct: 331 KLQEVVVSYLPLSHIAAQMIDIWLPMKAGGVTYFAQPDALK 371
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 18/194 (9%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLE--KNVSEPYTYRLVRWLILSK 119
W+K+ K+++ G V+R +A++AK LQ + +E N +P YRL + L+ K
Sbjct: 393 WEKMQEKMKSIGAKSSTVRRKVASWAKDVGLQTNLNKMELGSNSRKPLNYRLAKHLVFRK 452
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG 179
V++A+GLDRC +GAAPI+ + +FLSLDIP+ E++GMSE +G HT++ + F+L
Sbjct: 453 VRKALGLDRCTRCYTGAAPITKDTLEFFLSLDIPLFELYGMSESSGPHTITQANAFRLTS 512
Query: 180 VGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEW 239
G+ IPG +TK+ +PD+E NGEIC R V +L + + ++ +A W
Sbjct: 513 CGKVIPGCKTKLSNPDDEKNGEICFWG-----RHVFMGYLNMPDKTEEAL-----DAEGW 562
Query: 240 FYS-DLGAIYAGGF 252
+S DLG + F
Sbjct: 563 LHSGDLGKLDENNF 576
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 45/63 (71%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V A Q I+R N K+ SNAQ+IQK+ L DFSIP GELGPTMK+KRP V+K Y+ I+
Sbjct: 674 VQAAIQDGINRVNEKATSNAQRIQKWTVLDQDFSIPGGELGPTMKLKRPVVMKMYKEQIE 733
Query: 482 KFY 484
FY
Sbjct: 734 SFY 736
>gi|118341489|gb|AAI27563.1| Wu:fk81d02 protein [Danio rerio]
Length = 657
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 150/221 (67%), Gaps = 5/221 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY + RT AK+FLKLGLERYH V I+GFN+ EWF +D+ AI AGGFA G+YTTNSPEAC
Sbjct: 141 EYYKSCRTAAKSFLKLGLERYHGVGILGFNSTEWFIADIAAILAGGFAVGIYTTNSPEAC 200
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELG 323
+ ANI VVE+ KQL+KIL+++ + P LKAI+QY E K KP + +W E MELG
Sbjct: 201 QYVAENCQANILVVENHKQLQKILQIQDKLPHLKAIIQYKDELKEKKPNLYTWAEFMELG 260
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA- 382
R PD LD ++ + N+CCTL+YTSGT G K VMLSHDN+T+ A Q+ L A
Sbjct: 261 RDEPDTQLDDIISSQKPNQCCTLIYTSGTTGQPKGVMLSHDNLTWTAVATSQHVSLNDAD 320
Query: 383 --ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +DI+ M +FA +ALK
Sbjct: 321 KLQEVVVSYLPLSHIAAQMIDIWLPMKAGGVTYFAQPDALK 361
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 18/194 (9%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLE--KNVSEPYTYRLVRWLILSK 119
W+K+ K+++ G V+R +A++AK LQ + +E N +P YRL + L+ K
Sbjct: 383 WEKMQEKMKSIGAKSSTVRRKVASWAKDVGLQTNLNKMELGSNSRKPLNYRLAKHLVFRK 442
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG 179
V++A+GLDRC +GAAPI+ + +FLSLDIP+ E++GMSE +G HT++ + F+L
Sbjct: 443 VRKALGLDRCTRCYTGAAPITKDTLEFFLSLDIPLFELYGMSESSGPHTITQANAFRLTS 502
Query: 180 VGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEW 239
G+ IPG +TK+ +PD+E NGEIC R V +L + + ++ +A W
Sbjct: 503 CGKVIPGCKTKLSNPDDEKNGEICFWG-----RHVFMGYLNMPDKTEEAL-----DAEGW 552
Query: 240 FYS-DLGAIYAGGF 252
+S DLG + F
Sbjct: 553 LHSGDLGKLDENNF 566
>gi|148232473|ref|NP_001079494.1| long-chain-fatty-acid--CoA ligase ACSBG2 [Xenopus laevis]
gi|82209800|sp|Q7ZYC4.1|ACBG2_XENLA RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG2; AltName:
Full=Acyl-CoA synthetase bubblegum family member 2
gi|27696993|gb|AAH43850.1| Acsbg2 protein [Xenopus laevis]
Length = 739
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/226 (51%), Positives = 154/226 (68%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ K+Y R AK F+KLGLERYH V I+GFN+ EWF +D+GAI+AGGFA G+YTTN
Sbjct: 137 KMSYKQYYEQCRIAAKGFIKLGLERYHGVGILGFNSAEWFIADVGAIFAGGFAVGIYTTN 196
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDE 318
S EAC + +ANI VVE+ KQL+KIL+V+ Q P LKAI+QY E K +P + +W E
Sbjct: 197 SAEACHYVAQNCEANIIVVENQKQLQKILQVQDQLPHLKAIIQYKDELKEKRPNLYTWKE 256
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
M+LG+ PD LD+++ + N+CCTL+YTSGT G K VMLSHDNIT+ AA + +
Sbjct: 257 FMQLGKDIPDSQLDQIISSQKPNQCCTLIYTSGTTGQPKGVMLSHDNITWTAAAAGKTVR 316
Query: 379 LESAA---LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L A V+S+LPLSHIAAQ +DI+ M +FA +ALK
Sbjct: 317 LREATDLQEIVVSYLPLSHIAAQMIDIWLTMKYGGATYFAQPDALK 362
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ G +KR +A +AK L+ + + + P Y + L+ KV+
Sbjct: 384 WEKMQEKMKAVGAKSSTIKRKMATWAKGVGLETNLKKMNGSTPHPMKYHVANKLVFKKVR 443
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRC +GAAPI+ + +FLSL+IP+ E++GMSE +G HT+S PD F++ G
Sbjct: 444 KALGLDRCTKCYTGAAPITKDTLEFFLSLNIPVYELYGMSESSGPHTISLPDAFRITSCG 503
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ I G +TKI PD +G+GEI R V +L + + + S + W +
Sbjct: 504 KVISGCKTKIHQPDSDGSGEILFWG-----RHVFMGYLNMEDKTHES-----LDEEGWLH 553
Query: 242 S-DLGAIYAGGF 252
S D+G GF
Sbjct: 554 SGDIGKHDENGF 565
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 43/63 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q ++ N KS SNAQK+QK+ L DFSI GELGPTMK+KRP V K Y+ ID
Sbjct: 663 VYAAIQEGVNSVNEKSTSNAQKVQKWLILEKDFSITGGELGPTMKLKRPVVAKMYKDQID 722
Query: 482 KFY 484
FY
Sbjct: 723 SFY 725
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 12 SDL-LYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKV 70
SD+ L+T + ++ L ++ VA+ PP+++ L T +Y D VAL KQ + +W K+
Sbjct: 80 SDMKLWTAQRDSAVKLRLEDSDVASLPPVTIHQLFQETVNKYGDYVALASKQGD-QWHKM 138
Query: 71 TYK 73
+YK
Sbjct: 139 SYK 141
>gi|83405207|gb|AAI10944.1| Acsbg2 protein [Xenopus laevis]
Length = 738
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/226 (51%), Positives = 154/226 (68%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ K+Y R AK F+KLGLERYH V I+GFN+ EWF +D+GAI+AGGFA G+YTTN
Sbjct: 136 KMSYKQYYEQCRIAAKGFIKLGLERYHGVGILGFNSAEWFIADVGAIFAGGFAVGIYTTN 195
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDE 318
S EAC + +ANI VVE+ KQL+KIL+V+ Q P LKAI+QY E K +P + +W E
Sbjct: 196 SAEACHYVAQNCEANIIVVENQKQLQKILQVQDQLPHLKAIIQYKDELKEKRPNLYTWKE 255
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
M+LG+ PD LD+++ + N+CCTL+YTSGT G K VMLSHDNIT+ AA + +
Sbjct: 256 FMQLGKDIPDSQLDQIISSQKPNQCCTLIYTSGTTGQPKGVMLSHDNITWTAAAAGKTVR 315
Query: 379 LESAA---LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L A V+S+LPLSHIAAQ +DI+ M +FA +ALK
Sbjct: 316 LREATDLQEIVVSYLPLSHIAAQMIDIWLTMKYGGATYFAQPDALK 361
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ G +KR +A +AK L+ + + + P Y + L+ KV+
Sbjct: 383 WEKMQEKMKAVGAKSSTIKRKMATWAKGVGLETNLKKMNGSTPHPMKYHVANKLVFKKVR 442
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRC +GAAPI+ + +FLSL+IP+ E++GMSE +G HT+S PD F++ G
Sbjct: 443 KALGLDRCTKCYTGAAPITKDTLEFFLSLNIPVYELYGMSESSGPHTISLPDAFRITSCG 502
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ I G +TKI PD +G+GEI R V +L + + + S + W +
Sbjct: 503 KVISGCKTKIHQPDSDGSGEILFWG-----RHVFMGYLNMEDKTHES-----LDEEGWLH 552
Query: 242 S-DLGAIYAGGF 252
S D+G GF
Sbjct: 553 SGDIGKHDENGF 564
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 43/63 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q ++ N KS SNAQK+QK+ L DFSI GELGPTMK+KRP V K Y+ ID
Sbjct: 662 VYAAIQEGVNSVNEKSTSNAQKVQKWLILEKDFSITGGELGPTMKLKRPVVAKMYKDQID 721
Query: 482 KFY 484
FY
Sbjct: 722 SFY 724
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 12 SDL-LYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKV 70
SD+ L+T + ++ L ++ VA+ PP+++ L T +Y D VAL KQ + +W K+
Sbjct: 79 SDMKLWTAQRDSAVKLRLEDSDVASLPPVTIHQLFQETVNKYGDYVALASKQGD-QWHKM 137
Query: 71 TYK 73
+YK
Sbjct: 138 SYK 140
>gi|189230234|ref|NP_001121441.1| acyl-CoA synthetase bubblegum family member 2 [Xenopus (Silurana)
tropicalis]
gi|183985676|gb|AAI66192.1| LOC100158533 protein [Xenopus (Silurana) tropicalis]
Length = 741
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 154/226 (68%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ ++Y R AK FLKLGLERYH V I+GFN+ EWF +D+GAI+AGGFA G+YTTN
Sbjct: 139 KMTYEQYYEQCRIAAKGFLKLGLERYHGVGILGFNSAEWFIADVGAIFAGGFAVGIYTTN 198
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDE 318
S EAC + +ANI VVE+ KQL+KIL+++ Q P LKAI+QY E K +P + +W E
Sbjct: 199 SAEACHYVAQNCEANIIVVENQKQLQKILQIQDQLPHLKAIIQYKDELKEKRPNLYTWKE 258
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
M+LG+ PD LD+++ + N+CCTL+YTSGT G K VMLSHDNIT+ AA + +
Sbjct: 259 FMQLGKDIPDSQLDQIISSQKPNQCCTLIYTSGTTGQPKGVMLSHDNITWTAASAGKTVR 318
Query: 379 LESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L A V+S+LPLSHIAAQ +DI+ M +FA +ALK
Sbjct: 319 LREATDMQEIVVSYLPLSHIAAQMIDIWLTMKHGGATYFAQPDALK 364
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ G +KR +A +AK L+ + + + P Y + + L+ KV+
Sbjct: 386 WEKMQEKMKAVGAKSSTIKRKVATWAKGVGLETNLKKMNGSTPHPMKYHVAKKLVFKKVR 445
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRC +GAAPI+ + +FLSL+IP+ E++GMSE +G HT+S PD F++ G
Sbjct: 446 KALGLDRCTKCYTGAAPITKDTLEFFLSLNIPVYELYGMSESSGPHTISLPDAFRITSCG 505
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ I G +TKI PD +G+GEI
Sbjct: 506 KVISGCKTKIHQPDNDGSGEILF 528
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q ++ N K+ SNAQK+QK+ L DFSI GELGPTMK+KRP V K Y+ ID
Sbjct: 665 VYAAIQDGVNSVNQKATSNAQKVQKWLILDQDFSIAGGELGPTMKLKRPVVAKMYKDQID 724
Query: 482 KFY 484
FY
Sbjct: 725 SFY 727
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 12 SDL-LYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKV 70
SD+ L+TT + + ++GVA+ PP+++ L T +Y D VAL KQ + +W K+
Sbjct: 82 SDMKLWTTRRDNAVELRMEDSGVASLPPVTIHQLFQDTVKKYGDYVALASKQGD-QWHKM 140
Query: 71 TYK 73
TY+
Sbjct: 141 TYE 143
>gi|47221456|emb|CAG08118.1| unnamed protein product [Tetraodon nigroviridis]
Length = 694
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 196 EEGNG-EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
EEG ++ ++Y R AK+FLKLGLERY V I+GFNAPEWF SD+G I AGG A
Sbjct: 54 EEGQWVKLTYRQYYQRCRAAAKSFLKLGLERYRGVGILGFNAPEWFISDIGCILAGGLAT 113
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPG 312
G+YTTNSPEAC + +ANI VVE+ QL+KILKVK Q P LKAIVQY+G K P
Sbjct: 114 GIYTTNSPEACQYVAANCEANILVVENQTQLDKILKVKDQLPHLKAIVQYKGPLKQKLPF 173
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ +W E + LG +E L+ V++++ NECC+L+YTSGT G K VMLSHDN+T+ A+
Sbjct: 174 LYTWAEFIRLGEDVSEERLNAVIDSLQANECCSLIYTSGTTGNPKGVMLSHDNLTWTASA 233
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
K + A +IS+LPLSH+AAQ +I+ + +A+T++FA+ +ALK
Sbjct: 234 TQDRLKFKEAEERLISYLPLSHMAAQMFEIWISIWLASTVYFAEPDALK 282
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 92/143 (64%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++ G K + IA++AKS L + + + P+ + L L+ KV
Sbjct: 304 WEKMQENMKAVGAKASPMRKNIADWAKSIGLDYTYSTMNGENVVPWGFTLANSLVFKKVH 363
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLD+CR+S +GAAPIS E YF+SL+IPI +++GMSE +G H VS +++++ G
Sbjct: 364 AALGLDQCRISATGAAPISKETLDYFMSLNIPIMQMYGMSESSGPHYVSCNEEYRITSCG 423
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ +PG + K+ +PD++GNGEICL
Sbjct: 424 KALPGCRIKLENPDQDGNGEICL 446
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 13/154 (8%)
Query: 343 CCTLVYTSGTEGAS----KPVMLSHDNITFNAACIIQYFKLESAALSVISFL-----PLS 393
C L+ T+G E + + + I NA + K S L++ + P
Sbjct: 541 CTELIITAGGENIPPVPIEDALKAEVPIISNAMLLGDKLKFLSMLLTLKCVVNDSGEPTD 600
Query: 394 HIAAQTVDIYSVMTVAATL---WFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFL 450
++ + +D+ + V AT A+K +Y + Q I R N ++ SNAQK+QKF L
Sbjct: 601 KLSPEALDVCRQLGVTATKVSEIIANKEP-AIYNSIQEGIVRVNARATSNAQKVQKFTIL 659
Query: 451 PADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
DFSI GELGPTMK++RP VVK YQ I++ Y
Sbjct: 660 ERDFSIGGGELGPTMKLRRPIVVKMYQEKINEMY 693
>gi|410923595|ref|XP_003975267.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Takifugu
rubripes]
Length = 674
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 151/219 (68%), Gaps = 2/219 (0%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y R AK+FLKLGLERYH V I+GFNAPEWF+S +G I AGG A G+YTTNSPEA
Sbjct: 90 RQYYQQCRAAAKSFLKLGLERYHGVGILGFNAPEWFFSAIGCILAGGLATGIYTTNSPEA 149
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDELMEL 322
C + +AN+ VVE+ QL+KILKVK Q P LKAIVQY+G K P + +W+E M+L
Sbjct: 150 CQYVAANCEANVLVVENQAQLDKILKVKDQLPHLKAIVQYKGSLKQKLPFLYTWEEFMKL 209
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G +E L+ V++++ NECC+L+YTSGT G K VMLSHDN+T+ + L+ A
Sbjct: 210 GEEVSEEQLNAVIDSLRANECCSLIYTSGTTGNPKGVMLSHDNVTWTVQSALAMVNLKYA 269
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSH AAQ D++ + A T +FA+ +ALK
Sbjct: 270 EEVVVSYLPLSHAAAQMFDMWMCICYAVTTYFAEPDALK 308
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 156/307 (50%), Gaps = 34/307 (11%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ G K + +A++AK+ LQ+ + + P+ + L L+ +KV+
Sbjct: 330 WEKMQEKMKAVGAKASPMRKRVADWAKAIGLQYNYSAMNGENVVPWGFGLANSLVFTKVR 389
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC++ +GAAPI+ + YF+SL+IP+ E++GMSE +G HTVS +++++ G
Sbjct: 390 AALGLDRCKICFTGAAPITKDTLDYFMSLNIPLMELYGMSESSGPHTVSCNEEYRMTSCG 449
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPE-WF 240
+ +PG +TK+ +PD++GNGEIC R V +L + + ++ PE W
Sbjct: 450 KVMPGCKTKLDNPDKDGNGEICFWG-----RHVFMGYLNMPDKTMEAI------DPEGWL 498
Query: 241 YS-DLGA------IYAGGFAAGMYTTNSPEACLHCLVTS--DANICVVEDDKQLEKILKV 291
+S DLG +Y G + T E + A + ++ + L LK
Sbjct: 499 HSGDLGKHDHLNFLYITGRIKELIITAGGENIPPVPIEEALKAEVPIISNAMLLGDKLKF 558
Query: 292 KAQCPKLKAIVQYEGKP-DKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTS 350
+ LK +V G+P DK + D +LG AA +V E IA E VY S
Sbjct: 559 LSMLVTLKCVVNDSGEPTDKLSPEALDVCRQLGIAA-----TKVSEIIANRE--PAVYNS 611
Query: 351 GTEGASK 357
EG +
Sbjct: 612 IQEGMER 618
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 391 PLSHIAAQTVDIYSVMTVAATL---WFADKNALKVYKATQAAIDRANLKSISNAQKIQKF 447
P ++ + +D+ + +AAT A++ VY + Q ++R N ++ SNAQK+QKF
Sbjct: 575 PTDKLSPEALDVCRQLGIAATKVSEIIANREP-AVYNSIQEGMERVNARATSNAQKVQKF 633
Query: 448 EFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
L DFS+ GELGPTMK++RP V+K YQ I++ Y
Sbjct: 634 TILERDFSVGGGELGPTMKLRRPIVMKMYQEKINEMY 670
>gi|47221457|emb|CAG08119.1| unnamed protein product [Tetraodon nigroviridis]
Length = 587
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 154/229 (67%), Gaps = 3/229 (1%)
Query: 196 EEGNG-EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
EEG ++ ++Y R AK+FLKLGLERYH V I+GFNAPEWF SD+G I AGG A
Sbjct: 18 EEGQWVKLTYRQYYQQCRAAAKSFLKLGLERYHGVGILGFNAPEWFISDIGCILAGGLAT 77
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPG 312
G+YTTNSPEAC + +ANI VVE+ QL+KILKVK Q P LKAIVQY+G K P
Sbjct: 78 GIYTTNSPEACQYVAANCEANILVVENQTQLDKILKVKDQLPHLKAIVQYKGPLKQKLPF 137
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ +W E + LG +E L+ V++++ NECC+L+YTSGT G K VMLSHDN+T+
Sbjct: 138 LYTWAEFIRLGEDVSEERLNAVIDSLQANECCSLIYTSGTTGNPKGVMLSHDNVTWTVQS 197
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ L A VIS+LPLSH AAQ D++ ++ A T +FA+ +ALK
Sbjct: 198 ALSTVNLTPAEEVVISYLPLSHAAAQMFDMWLGISFAVTTYFAEPDALK 246
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 95/143 (66%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ G K + IAN+AK+ L++ + + P+ + L L+ KV+
Sbjct: 268 WEKMQEKMKAVGAKASPMRKGIANWAKAIGLEYNYSAMNGENVVPWGFGLANSLVFKKVR 327
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC++ +GAAPI+ + YF+SL+IP+ E++GMSE +G HTVS +++++ G
Sbjct: 328 AALGLDRCKMCFTGAAPITKDTLEYFMSLNIPVMEIYGMSESSGPHTVSRNEEYRITSCG 387
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ +PG +TK+ +PDE+GNGEIC
Sbjct: 388 KVMPGCKTKLDNPDEDGNGEICF 410
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 391 PLSHIAAQTVDIYSVMTVAATL---WFADKNALKVYKATQAAIDRANLKSISNAQKIQKF 447
P ++ + +D+ + V AT A+K +Y + Q I R N ++ SNAQK+QKF
Sbjct: 513 PTDKLSPEALDVCRQLGVTATKVSEIIANKEP-AIYNSIQEGIVRVNARATSNAQKVQKF 571
Query: 448 EFLPADFSIPTGELG 462
L DFSI GELG
Sbjct: 572 TILERDFSIGGGELG 586
>gi|291223419|ref|XP_002731707.1| PREDICTED: acyl-CoA synthetase bubblegum family member 1-like
[Saccoglossus kowalevskii]
Length = 726
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 145/218 (66%), Gaps = 2/218 (0%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AKAF+KLGLER+H V IIGFN+PEWF +D+GAI+AGG A G+YTTNSPEAC
Sbjct: 143 EYYHACRNTAKAFIKLGLERFHGVGIIGFNSPEWFMADVGAIFAGGLAVGIYTTNSPEAC 202
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD--KPGVISWDELMELG 323
+ SDANI VVE+ QL+KILKV + P LKAIVQY G+ + + V +W EL E G
Sbjct: 203 HYVADNSDANIIVVENTAQLKKILKVWDRLPHLKAIVQYSGELEEKRENVYTWSELQEFG 262
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+ D LD ++ +A N+CCTL+YTSGT G K VMLSHDN + + KL
Sbjct: 263 KLVTDSELDERIDFLAPNQCCTLIYTSGTTGNPKGVMLSHDNFVWTTKMCVSAAKLNKGT 322
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLSH+AAQ DIY M T +FA +ALK
Sbjct: 323 DCLVSYLPLSHVAAQLFDIYIPMVACGTTYFAQPDALK 360
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 87/143 (60%), Gaps = 6/143 (4%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ L+ TG K+ I+ +AKS M + S P+ + L + K+K
Sbjct: 382 WEKIQDTLKEVGRNVTGFKKRISTWAKSVGYDGNMRIMNGQ-SPPWGWTLANMFVFKKIK 440
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+G DRC + SGAAPI+ E + YF+SL+IPI ++GMSE +G HT+S P F + G
Sbjct: 441 AALGFDRCNLCFSGAAPIAKETEDYFMSLNIPIYNIYGMSESSGPHTISLPGKFLVGSAG 500
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ PG++TK+ DPD++GNGE+C
Sbjct: 501 KEFPGSETKLADPDKDGNGEVCF 523
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 49/76 (64%)
Query: 410 ATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR 469
ATL K K+ KA Q A+DR N + S AQK+QKF L DFSI GELGPT+K+KR
Sbjct: 646 ATLSSEAKKDEKINKAIQGAVDRYNANATSRAQKVQKFTILEGDFSIAGGELGPTLKLKR 705
Query: 470 PFVVKKYQSIIDKFYD 485
F V KY + I+ FY+
Sbjct: 706 HFAVSKYTNEIEAFYE 721
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 5 RPNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQEN 64
+P + L +D Y T+P G ++H+ +G ++ PI+V L T ++PD AL K+ N
Sbjct: 75 KPGECLPADSFYATKPDGAVKLHMANSGPRSEQPITVHQQLVNTMKEFPDLKALSVKR-N 133
Query: 65 GEWKKVTY 72
EW T+
Sbjct: 134 DEWISWTW 141
>gi|320164814|gb|EFW41713.1| PRTD-NY3 [Capsaspora owczarzaki ATCC 30864]
Length = 793
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 150/222 (67%), Gaps = 3/222 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K+Y VRT AKAF+ LGLE +H VCI+GFN+PEWF +DLGAI+AGG G+YTTNS
Sbjct: 202 ITYKDYYETVRTAAKAFIALGLEPHHGVCILGFNSPEWFIADLGAIFAGGLGCGIYTTNS 261
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP--GVISWDEL 319
P+AC + S ANI VVE+D QL+KILKV+ + P +KAI+QY K +P G+ SW+E
Sbjct: 262 PDACQFIIEDSRANIVVVENDTQLQKILKVRHRLPLVKAIIQYHDKLSEPGEGLYSWNEF 321
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+ DE+L+ ++ CCTL+YTSGT G K VMLSHDN+T+ +A + K+
Sbjct: 322 LSKSSLTSDETLEERIQAQTATHCCTLIYTSGTTGHPKGVMLSHDNLTWTSAQTSKQVKV 381
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+A +S+LPLSH+AAQ DI+ M AT WFA +ALK
Sbjct: 382 -AANEQAVSYLPLSHVAAQMTDIHMPMLHGATTWFAQADALK 422
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ +LQ T+G + +A +AK L+ M +E+ S P+ + L L+ S ++
Sbjct: 444 WEKMAEQLQAFGKTTSGFSQRVAGWAKEIGLEGNM-RVERGESVPWGWSLANALVFSNIR 502
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+GLDRC+++LS AAPIS E YFLS+++P+ E++GMSE G HTVS P K VG
Sbjct: 503 QALGLDRCKIALSSAAPISRETLDYFLSINLPLFEIYGMSESTGPHTVSVPGQRKTGFVG 562
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
T G +T+I P +G+GEIC + R + +L E+ V + W +
Sbjct: 563 VTFDGAETRIHRPGLDGSGEICFRG-----RHIFMGYLGH-PEKTAEVV----DGDGWLH 612
Query: 242 S-DLGAIYAGGF 252
S D+G ++ GGF
Sbjct: 613 SGDVGQMFEGGF 624
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 423 YKATQAAIDRA----NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 478
+ A AA+++ N S S+AQ +QK+ LP DF+ GELGPT+K++R V++KYQ
Sbjct: 718 HPAFNAALEQGMRLVNELSESHAQHVQKWVVLPMDFTTNGGELGPTLKLRRHVVMQKYQL 777
Query: 479 IIDKFY 484
+ID Y
Sbjct: 778 LIDSMY 783
>gi|395512904|ref|XP_003760673.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Sarcophilus harrisii]
Length = 726
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 151/224 (67%), Gaps = 8/224 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AK+FLKLGLER+H V I+GFNA EW +D+GAI+AGG A G+YTTNSPEAC
Sbjct: 139 EYYYECRKAAKSFLKLGLERFHGVGILGFNAAEWLIADIGAIFAGGLAVGIYTTNSPEAC 198
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKA---QCPKLKAIVQYEGKPDK--PGVISWDELM 320
+ L S NI V+E++ QL+KIL+VK+ + LKAI+QY GK + P + SWDE M
Sbjct: 199 EYVLNHSQTNILVLENETQLQKILQVKSPEEKLSHLKAIIQYRGKIKEKAPDLYSWDEFM 258
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
LG+ PDE L+ +L++ N+CCTL+YTSGT G K VMLSHDNIT+ + L
Sbjct: 259 ALGKDVPDEKLEEILDSQKPNQCCTLIYTSGTTGQPKGVMLSHDNITWTSGMATSSLTLN 318
Query: 381 SAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
S V+S+LPLSH+AAQ +DI+ M + T +FA +ALK
Sbjct: 319 SPPSHQEIVVSYLPLSHVAAQMMDIWLPMKIGGTTYFAQPDALK 362
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQTTGV-----KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ G KR +A +AKS LQ + + Y L +WL+ SKV+
Sbjct: 384 WEKMQEKMKEAGASSSSFKRKVATWAKSVGLQQNVKRMNGESDFSLRYHLAKWLVYSKVQ 443
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC SGAAPI+ + +FLSLDIP+CE++GMSE G HT++ D F+L G
Sbjct: 444 YALGLDRCAQYFSGAAPITKDTLEFFLSLDIPVCELYGMSESTGPHTITHRDCFRLMSCG 503
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G + I D EG GE+C R V +L + + ++ G W +
Sbjct: 504 KVMHGCKNMIYQKDHEGVGEVCFWG-----RHVFMGYLDMEEKTREAIDEKG-----WLH 553
Query: 242 S-DLGAIYAGGF 252
S DLG + + GF
Sbjct: 554 SGDLGKMDSEGF 565
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I+ N ++ SNAQ+IQK+ L DFSI GELGPT K+KRP V K YQ I+
Sbjct: 663 VYEAIEKGIEAVNKEATSNAQRIQKWMILNKDFSIVGGELGPTTKLKRPVVAKMYQEQIE 722
Query: 482 KFY 484
FY
Sbjct: 723 SFY 725
>gi|390358766|ref|XP_003729334.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG2-like [Strongylocentrotus purpuratus]
Length = 563
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 148/219 (67%), Gaps = 2/219 (0%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EY R AK+FLKLGLER+H V IIGFN+PEWF S +GA++AGGF G+YTTNS EA
Sbjct: 81 REYWDQSRAAAKSFLKLGLERFHGVGIIGFNSPEWFLSSMGAMFAGGFGVGVYTTNSAEA 140
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP--GVISWDELMEL 322
C + AN+ VVE+ KQL+KILKV Q P LKA+VQY G ++ V W++ M+L
Sbjct: 141 CQYVAGNCKANVIVVENSKQLQKILKVWDQLPHLKAVVQYTGTLEEKMDNVYEWEDFMKL 200
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G D+ LDR++E+ A N+CC L+YTSGT G K VM+SHDN T+ + + +
Sbjct: 201 GCYMTDDELDRIMESQAANQCCALIYTSGTTGNPKGVMISHDNYTWISHRCLSQVDIPFG 260
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ V+S+LPLSH+AAQ DIY + +A T +FA +ALK
Sbjct: 261 SHRVVSYLPLSHVAAQVFDIYFPLHLAGTTYFAQPDALK 299
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TGVK+ I +AK + +A + + P+ + + ++ KV+ A+GLD+C + S
Sbjct: 336 TGVKKRIGTWAKDIGYRGNVAIANRQ-TVPWGWTVANIVVFRKVRLALGLDKCLYNFSAG 394
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
AP+S E YF+S++IP+ +++GMSE G H+ P F++ G T PG++TKI DPD
Sbjct: 395 APLSMETLEYFMSVNIPVYDIYGMSESTGPHSFCLPGKFRIGSSGSTFPGSKTKISDPDS 454
Query: 197 EGNGEICL 204
+GNGE+C
Sbjct: 455 DGNGEVCF 462
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1 MKEERPNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQ 60
+ E +P ++ S++ T E G ++ +A V PP +V GLL R +YP+ VA+
Sbjct: 11 LPESKPCELAPSEVHCTVEGSGAVKLRECDAEVN-HPPNTVHGLLRRIQREYPENVAMAI 69
Query: 61 KQENGEWKKVTYK 73
K+ NG+W K TY+
Sbjct: 70 KR-NGDWVKWTYR 81
>gi|195433535|ref|XP_002064766.1| GK15027 [Drosophila willistoni]
gi|194160851|gb|EDW75752.1| GK15027 [Drosophila willistoni]
Length = 666
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/266 (46%), Positives = 167/266 (62%), Gaps = 23/266 (8%)
Query: 178 DGVGR----TIPGTQTKIVD--PD---------EEGNGEICLKEYEANVRTVAKAFLKLG 222
DG+G +IPG + V+ P+ + G + ++YE V VAKAF+KLG
Sbjct: 38 DGLGAEEPISIPGLLKRTVNNYPEYPALRSKNGKNGYTTVTYRQYEQKVHQVAKAFIKLG 97
Query: 223 LERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDD 282
LE +HSV ++ FN EWFYS +GAI+A G AG+YTTNS +A LH L S A I VV+D
Sbjct: 98 LEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVLHVLDNSKAQIVVVDDS 157
Query: 283 KQLEKILKVKAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLE 336
KQ++KI ++ + P LKA +Q + +P P G W E+ + + ++ + LE
Sbjct: 158 KQMDKIHAIRDKLPNLKAAIQIQ-EPYAPYLKKEDGYYRWSEIESMNVSDVEDKFKQRLE 216
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHI 395
IA NECC LVYTSGT G K VMLSHDNITF+A I++ K+ A S++S+LPLSH+
Sbjct: 217 NIAINECCCLVYTSGTVGMPKGVMLSHDNITFDARGIVKSLEKIVVGAESIVSYLPLSHV 276
Query: 396 AAQTVDIYSVMTVAATLWFADKNALK 421
AAQTVDIY+ +A +WFADK+ALK
Sbjct: 277 AAQTVDIYTAAAIACCIWFADKDALK 302
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K+ +A +AK +L+HYM K S + Y++ + LI+SKVKQA+G D +S AAP+
Sbjct: 342 KKMLAGWAKGITLKHYMESQGK-TSGGFRYKIAKSLIMSKVKQALGFDHVVTLVSAAAPM 400
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
S E K+YFLSLD+ I + FGMSE G HT+ PD L+ +G+T+PG ++KI++ DE G+
Sbjct: 401 SPETKKYFLSLDLKILDAFGMSETGGCHTICLPDSVALNSIGKTMPGCESKIINKDESGH 460
Query: 200 GEICLK 205
GE+C++
Sbjct: 461 GELCIR 466
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 48/64 (75%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + I RAN SISNAQK+QKF LP DFSIPTGELGPT+KVKR V K+Y I
Sbjct: 602 KVWKSIEDGIKRANKHSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVAKQYADEI 661
Query: 481 DKFY 484
+K Y
Sbjct: 662 EKLY 665
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +++ TT P +I + + G+ A+ PIS+PGLL RT YP+ AL K
Sbjct: 13 PNRLRPAEVYRTTVPTEAVKIRMHKDGLGAEEPISIPGLLKRTVNNYPEYPALRSKNGKN 72
Query: 66 EWKKVTYK 73
+ VTY+
Sbjct: 73 GYTTVTYR 80
>gi|326934302|ref|XP_003213230.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG2-like [Meleagris gallopavo]
Length = 762
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/226 (49%), Positives = 148/226 (65%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ K Y AK+FLKLGLER+H VCI+GFN+PEWF +D+GAI+AGG G+YTTN
Sbjct: 130 KLTYKMYYDKCWKAAKSFLKLGLERFHGVCILGFNSPEWFIADIGAIFAGGLGVGIYTTN 189
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDE 318
SPEAC + ANI VVE+ QL+KIL+V+ + P +KAI+QY E K +P + SW E
Sbjct: 190 SPEACHYVAENCSANILVVENHTQLQKILEVEHKLPHMKAIIQYGEEIKEKRPNLYSWRE 249
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
++LG PD L V+E+ N+CCTL+YTSGT G K VMLSHDN+T+
Sbjct: 250 FLDLGEDVPDSQLREVIESQKPNQCCTLIYTSGTTGQPKGVMLSHDNLTWTPIAAGHSLM 309
Query: 379 LESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L A V+S+LPLSHIAAQ +DI+ +T ++FA +ALK
Sbjct: 310 LLDATKKQELVVSYLPLSHIAAQMMDIWLSITFGGQVFFAQPDALK 355
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+++ G K R +A++AK LQ + ++ P +RL R L+ KV+
Sbjct: 377 WEKIEEKMKSIGAKSSTLRRKVASWAKGVGLQTNLKWMNGYSEVPVNFRLARHLVYKKVR 436
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRC +GAAPIS E +FLSL+IP+ E++GMSE +G HTVS F+L G
Sbjct: 437 KAIGLDRCTKCFTGAAPISRETLEFFLSLNIPVFELYGMSESSGPHTVSITQAFRLTSCG 496
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ + G +T I PD +G GEIC
Sbjct: 497 KGMAGCRTLIHKPDADGIGEICF 519
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y A QAA+ N +++SNAQKIQK+ L DFS+ GELGPTMK+KRP V +KY+ +ID
Sbjct: 656 IYAAIQAAVSEVNKRAVSNAQKIQKWIILEKDFSVGGGELGPTMKLKRPAVAQKYKELID 715
Query: 482 KFY 484
+FY
Sbjct: 716 EFY 718
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 15 LYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKVTYKL 74
++TTE G ++ + E G+ ++ P +V L ++Y D AL K+ NG+W K+TYK+
Sbjct: 77 MWTTERDGEVKLRMDEEGIGSRTPKTVHDLFQEAVSKYSDYYALAFKK-NGQWVKLTYKM 135
>gi|432855061|ref|XP_004068053.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Oryzias
latipes]
Length = 672
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 145/206 (70%), Gaps = 5/206 (2%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
LGL+RYH VCI+GFN+ EWF +D+GAI AGGF G+YTTNSPEAC AN+ V+E
Sbjct: 88 LGLQRYHGVCILGFNSAEWFIADIGAILAGGFGVGVYTTNSPEACQFVAENCKANVIVLE 147
Query: 281 DDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDELMELGRAAPDESLDRVLETI 338
++KQL+KIL+++ Q P LKAIVQY+G + +P + +W E MELGR PD LD ++ +
Sbjct: 148 NEKQLQKILQIEDQLPHLKAIVQYKGALREKRPNLYTWAEFMELGRDEPDGPLDAIIASQ 207
Query: 339 ATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS---VISFLPLSHI 395
N+CC+L+YTSGT G K VMLSHDN+T+ A ++ L A ++ V+S+LPLSHI
Sbjct: 208 KPNQCCSLIYTSGTTGQPKGVMLSHDNLTWTALSTAKHVCLTDATVAQEVVVSYLPLSHI 267
Query: 396 AAQTVDIYSVMTVAATLWFADKNALK 421
AAQ VD++ +M V + FA +ALK
Sbjct: 268 AAQMVDMWLIMRVGGSTHFAQPDALK 293
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 95/146 (65%), Gaps = 8/146 (5%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSE---PYTYRLVRWLILS 118
W+K+ K+++ G K R +A++AK LQ + + +N + P+ Y L + L+
Sbjct: 315 WEKMQEKMKSIGAKSSTLRRKVASWAKDVGLQTNLTRMRQNTATGQAPFQYHLAKKLVFK 374
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
KV++A+GLDRC +GAAP + + +FLSLDIP+ E++GMSEC G HT+S PD F+L
Sbjct: 375 KVRKALGLDRCTKCYTGAAPTTKDTLEFFLSLDIPLFELYGMSECTGPHTISRPDAFRLT 434
Query: 179 GVGRTIPGTQTKIVDPDEEGNGEICL 204
G+ IPG TK+ +PDEEGNGEIC
Sbjct: 435 SCGKEIPGCTTKLDNPDEEGNGEICF 460
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V+ A Q I++ N K+ SNAQ IQKF L DFSI GELGPTMK+KRP V+K Y+ ID
Sbjct: 597 VHAAIQEGINQVNKKATSNAQCIQKFVILNRDFSINGGELGPTMKLKRPVVLKMYKDQID 656
Query: 482 KFY 484
FY
Sbjct: 657 NFY 659
>gi|242004518|ref|XP_002423130.1| Long-chain-fatty-acid--CoA ligase, putative [Pediculus humanus
corporis]
gi|212506076|gb|EEB10392.1| Long-chain-fatty-acid--CoA ligase, putative [Pediculus humanus
corporis]
Length = 658
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/228 (49%), Positives = 152/228 (66%), Gaps = 1/228 (0%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P E I +EY + AK FLKLGLER+HSV +IGFNAPEW + LG+I AGG
Sbjct: 66 PKERSFCFISFEEYYRLAKVAAKGFLKLGLERHHSVALIGFNAPEWVIAYLGSILAGGVG 125
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
G+Y+TNS EA L+CL + +I VV+++ Q +KIL+ K + P LKAI+QY G+P V
Sbjct: 126 CGIYSTNSAEATLYCLQAASVDIAVVDNNIQAQKILQYKHRLPNLKAIIQYFGRPLVQNV 185
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+SW E +++G A E L V +TIA NECCT+++TSGT G K VMLSHDN+ +NA +
Sbjct: 186 LSWREFIKIGEAQSSEKLHEVRKTIAVNECCTIIFTSGTTGNPKGVMLSHDNLIWNAYSV 245
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L S +IS+LPLSH+AA VD+Y + V AT++FA+ +ALK
Sbjct: 246 AINQDLISTE-KIISYLPLSHVAALMVDVYCPLMVRATVYFAETDALK 292
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 144/297 (48%), Gaps = 36/297 (12%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+KV+ K++ G +KR I +AK+ +Q + + S Y L + LI K+K
Sbjct: 314 WEKVSDKIKLAGAESNFIKRRIVAWAKNQGIQRNLDLINGIDSPNLKYLLAKSLIFKKIK 373
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+G D C SGAAP+S +K Y SLDI I EV+GMSE +G HTV+ FKLD VG
Sbjct: 374 SRLGFDACTTFWSGAAPLSEGVKLYLTSLDIVILEVYGMSESSGPHTVNTNVAFKLDSVG 433
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T+PGT TKI +PD G GEI L N R + +L L++ V + W +
Sbjct: 434 KTLPGTMTKIYNPDSNGEGEILL-----NGRNIFMGYLN-DLKQTEEVV----DPDGWLH 483
Query: 242 S-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKA 300
+ D+G GF +Y T + L + V+E + VKAQ P L
Sbjct: 484 TGDIGKFDDQGF---LYITGRKKELLITAGGENIYPAVIEQN--------VKAQLPFLGH 532
Query: 301 IVQYEGKPDKPGVI---SWDELMELGRAAPDESLDRVLE-TIATNECCTLVYTSGTE 353
+V K ++ S +E ++ G E LD++ E TI + L YT +E
Sbjct: 533 VVLICDKKKFLSILITFSSEEDVDTG-----EPLDQLSELTIKWLKDLNLTYTKNSE 584
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 50/65 (76%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ ++ Q ID AN K+ISNAQKIQKF LP DFS TGELGPT+K+KR F+ +KY+ +I
Sbjct: 593 KILESIQRGIDEANKKAISNAQKIQKFRILPRDFSTITGELGPTLKLKRNFINEKYKDVI 652
Query: 481 DKFYD 485
DK YD
Sbjct: 653 DKIYD 657
>gi|194761054|ref|XP_001962747.1| GF14276 [Drosophila ananassae]
gi|190616444|gb|EDV31968.1| GF14276 [Drosophila ananassae]
Length = 666
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 171/280 (61%), Gaps = 27/280 (9%)
Query: 168 TVSAPDDFKL----DGVGR----TIPGTQTKIVD--PD---------EEGNGEICLKEYE 208
T + D KL +G+G ++PG + V+ PD + G + K+YE
Sbjct: 24 TTNREDAVKLWLAKEGIGAEEPISVPGMLKRTVNNYPDYPALRTKNGKNGYHTVTYKQYE 83
Query: 209 ANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHC 268
V VAKAF+KLGLE +HSV ++ FN EWFYS +GA++A G AG+YTTNS +A LH
Sbjct: 84 QKVHQVAKAFIKLGLEEHHSVGVLAFNCAEWFYSAMGAVHARGIIAGIYTTNSADAVLHV 143
Query: 269 LVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP------GVISWDELMEL 322
L +S A I VV+D KQ+EKI ++ + PKLKA +Q + +P P G W E+ +
Sbjct: 144 LESSHAQIVVVDDAKQMEKIHSIRDKLPKLKAAIQIQ-EPYAPFMKKEDGYYRWSEIESM 202
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLES 381
A ++ LE IA NECC LVYTSGT G K VMLSHDNITF+ I++ ++
Sbjct: 203 NVADVEDQFKTRLENIAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVIV 262
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++S+LPLSH+AAQTVDIY+ VA +WFADK+ALK
Sbjct: 263 GEEAIVSYLPLSHVAAQTVDIYTCAYVAGCIWFADKDALK 302
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
+K+ +A +AK +L+HYM KN + Y++ + LILSKVK+A+GLDR R S AAP
Sbjct: 341 LKKMLAGWAKGITLKHYMVSQGKNTG-GFRYKIAKSLILSKVKEALGLDRARTLASAAAP 399
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 198
+S E K+YFLSLD+ I + FGMSE AG H++ PD L +G+T+PG ++K ++ D G
Sbjct: 400 MSPETKKYFLSLDLKIIDAFGMSETAGCHSICLPDSVTLSSIGKTLPGCESKFINKDSNG 459
Query: 199 NGEICLK 205
+GE+C++
Sbjct: 460 HGELCIR 466
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 45/64 (70%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + I RAN SISNAQK+QKF L DFSIPTGELGPT+KVKR V K Y I
Sbjct: 602 KVWKSIEDGIKRANKYSISNAQKVQKFAILKHDFSIPTGELGPTLKVKRSVVAKMYADEI 661
Query: 481 DKFY 484
+ Y
Sbjct: 662 ESLY 665
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +D TT ++ L + G+ A+ PISVPG+L RT YPD AL K
Sbjct: 13 PNRLRQADAYRTTNREDAVKLWLAKEGIGAEEPISVPGMLKRTVNNYPDYPALRTKNGKN 72
Query: 66 EWKKVTYK 73
+ VTYK
Sbjct: 73 GYHTVTYK 80
>gi|449491800|ref|XP_002192182.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Taeniopygia
guttata]
Length = 712
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 141/206 (68%), Gaps = 5/206 (2%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
LGLER+H V I+GFN+ EWF +D+GAI AGG A G+YTTNSPEAC + ANI VVE
Sbjct: 126 LGLERFHGVGILGFNSAEWFIADIGAILAGGLAVGIYTTNSPEACHYVAENCSANIIVVE 185
Query: 281 DDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELGRAAPDESLDRVLETI 338
+ KQL+KIL+++ + P LK IVQY E K +P + SW E MELGR PD L ++ +
Sbjct: 186 NHKQLQKILEIEHRLPHLKGIVQYREEIKEKRPNLYSWREFMELGRDVPDSRLHEIIASQ 245
Query: 339 ATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA---ALSVISFLPLSHI 395
N+CCTL+YTSGT G K VMLSHDN+T+ AA ++ L A V+S+LPLSHI
Sbjct: 246 KPNQCCTLIYTSGTTGQPKGVMLSHDNLTWTAAAAARFIMLSDAHDKQEEVVSYLPLSHI 305
Query: 396 AAQTVDIYSVMTVAATLWFADKNALK 421
AAQ DI++ MT+ ++FA +ALK
Sbjct: 306 AAQMCDIWAAMTLGVQVYFAQPDALK 331
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+++ G+K R +A +AK LQ + + P +RL + L+ KV+
Sbjct: 353 WEKMEEKMKSVGMKASALRRKVATWAKGVGLQTNLKRMNGCSEVPVNFRLAQQLVYRKVR 412
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRC +GAAPI+ E +FLSL+IP+ E++GMSE +G HT S P FKL G
Sbjct: 413 KAIGLDRCTKCYTGAAPIARETLEFFLSLNIPVLELYGMSESSGPHTASLPHAFKLGSCG 472
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ + G T I PD++G GEIC
Sbjct: 473 KELIGCHTLIHKPDKDGIGEICF 495
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y A Q I N ++SNAQKIQK+ L DFS+ GELGPT+K+KRP V +KYQ I
Sbjct: 632 IYAAIQKGISAVNEGAVSNAQKIQKWVLLEKDFSLFGGELGPTLKLKRPVVAQKYQDQIA 691
Query: 482 KFY 484
+FY
Sbjct: 692 QFY 694
>gi|449674019|ref|XP_004208091.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like, partial
[Hydra magnipapillata]
Length = 416
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 150/221 (67%), Gaps = 4/221 (1%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
KEY +RT AKAF++LGLE Y+ V I+GFN+PEW ++D+GAI+AGG A G+YTTN+ E
Sbjct: 119 KEYFEEIRTTAKAFIQLGLEPYNGVGILGFNSPEWLFADVGAIFAGGLAVGIYTTNNSEM 178
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDELMEL 322
C + NI VVE++ QL+KIL+V + PKLKAIVQY G K KP + +W+ELME+
Sbjct: 179 CHFNCEDACCNIVVVENNVQLQKILQVWDRLPKLKAIVQYTGELKEKKPNLYTWNELMEI 238
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL--E 380
GR D L++ + + N+CCTL+YTSGT G K VMLSHDNIT A +Y L +
Sbjct: 239 GRGISDSVLEQRINAQSPNKCCTLIYTSGTTGNPKGVMLSHDNITICAIAASKYVGLNPD 298
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +S+LPLSHIAAQ DI+ + A +WFA +ALK
Sbjct: 299 DSQDQAVSYLPLSHIAAQLTDIWIPVFAGACVWFAGPDALK 339
>gi|195579148|ref|XP_002079424.1| GD23948 [Drosophila simulans]
gi|194191433|gb|EDX05009.1| GD23948 [Drosophila simulans]
Length = 666
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 164/266 (61%), Gaps = 23/266 (8%)
Query: 178 DGVGR----TIPGTQTKIVDP-----------DEEGNGEICLKEYEANVRTVAKAFLKLG 222
DG+G ++PG + V+ + G + K+YE V VAKAF+KLG
Sbjct: 38 DGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLG 97
Query: 223 LERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDD 282
LE +HSV ++ FN EWFYS +GAI+A G AG+YTTNS +A H L +S A I VV+D
Sbjct: 98 LEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVVVDDA 157
Query: 283 KQLEKILKVKAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLE 336
KQ++KI ++ + PKLKA +Q + +P P G W E+ + + ++ LE
Sbjct: 158 KQMDKIHAIRDKLPKLKAAIQIQ-EPYSPYLKKEDGYYRWSEIESMNVSDVEDQYKTRLE 216
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHI 395
+A NECC LVYTSGT G K VMLSHDNITF+ I++ ++ A S++S+LPLSH+
Sbjct: 217 NVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSYLPLSHV 276
Query: 396 AAQTVDIYSVMTVAATLWFADKNALK 421
AAQTVDIY+ VA +WFADK+ALK
Sbjct: 277 AAQTVDIYTCAFVAGCIWFADKDALK 302
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
+K+ +A++AK +L+HYM K+ S + Y++ + LI+SKVKQA+G DR S AAP
Sbjct: 341 LKKMLASWAKGITLKHYMVSQGKS-SGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAP 399
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 198
+S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+T+PG ++K ++ D G
Sbjct: 400 MSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANG 459
Query: 199 NGEICLK 205
+GE+C++
Sbjct: 460 HGELCIR 466
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + AI RAN +SISNAQK+QKF LP DFSIPTGELGPT+KVKR V K Y I
Sbjct: 602 KVWKSIEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEI 661
Query: 481 DKFY 484
+K Y
Sbjct: 662 EKLY 665
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +D TT +I + + G+ A+ PISVPGLL RT Y D AL K
Sbjct: 13 PNRLRQADAYRTTNRQDAVKIRMAKDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKN 72
Query: 66 EWKKVTYK 73
+ VTYK
Sbjct: 73 GYHTVTYK 80
>gi|195473961|ref|XP_002089260.1| GE19019 [Drosophila yakuba]
gi|194175361|gb|EDW88972.1| GE19019 [Drosophila yakuba]
Length = 666
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 164/266 (61%), Gaps = 23/266 (8%)
Query: 178 DGVGR----TIPGTQTKIVDP-----------DEEGNGEICLKEYEANVRTVAKAFLKLG 222
DG+G ++PG + V+ + G + K+YE V VAKAF+KLG
Sbjct: 38 DGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLG 97
Query: 223 LERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDD 282
LE +HSV ++ FN EWFYS +GAI+A G AG+YTTNS +A H L +S A I VV+D
Sbjct: 98 LEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVVVDDA 157
Query: 283 KQLEKILKVKAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLE 336
KQ++KI ++ + PKLKA +Q + +P P G W E+ + + ++ LE
Sbjct: 158 KQMDKIHAIRDKLPKLKAAIQIQ-EPYSPYLKKEDGYYRWSEIESMNVSDVEDQYKTRLE 216
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHI 395
+A NECC LVYTSGT G K VMLSHDNITF+ I++ ++ A S++S+LPLSH+
Sbjct: 217 NVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSYLPLSHV 276
Query: 396 AAQTVDIYSVMTVAATLWFADKNALK 421
AAQTVDIY+ VA +WFADK+ALK
Sbjct: 277 AAQTVDIYTCAFVAGCIWFADKDALK 302
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
+K+ +A++AK +L+HYM K+ S + Y++ + LI+SKVKQA+G DR S AAP
Sbjct: 341 LKKMLASWAKGITLKHYMVSQGKS-SGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAP 399
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 198
+S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+T+PG ++K ++ D G
Sbjct: 400 MSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANG 459
Query: 199 NGEICLK 205
+GE+C++
Sbjct: 460 HGELCIR 466
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 49/64 (76%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + A+ RAN +SISNAQK+QKF LP DFSIPTGELGPT+KVKR V K Y I
Sbjct: 602 KVWKSIEDAVKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEI 661
Query: 481 DKFY 484
+K Y
Sbjct: 662 EKLY 665
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ ++ TT +I L + G+ A+ PISVPGLL RT Y D AL K
Sbjct: 13 PNRLRQAEAYRTTNREDAVKIRLAKDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKN 72
Query: 66 EWKKVTYK 73
+ VTYK
Sbjct: 73 GYHTVTYK 80
>gi|195338363|ref|XP_002035794.1| GM15457 [Drosophila sechellia]
gi|194129674|gb|EDW51717.1| GM15457 [Drosophila sechellia]
Length = 666
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 164/266 (61%), Gaps = 23/266 (8%)
Query: 178 DGVGR----TIPGTQTKIVDP-----------DEEGNGEICLKEYEANVRTVAKAFLKLG 222
DG+G ++PG + V+ + G + K+YE V VAKAF+KLG
Sbjct: 38 DGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLG 97
Query: 223 LERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDD 282
LE +HSV ++ FN EWFYS +GAI+A G AG+YTTNS +A H L +S A I VV+D
Sbjct: 98 LEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVVVDDA 157
Query: 283 KQLEKILKVKAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLE 336
KQ++KI ++ + PKLKA +Q + +P P G W E+ + + ++ LE
Sbjct: 158 KQMDKIHAIRDKLPKLKAAIQIQ-EPYSPYLKKEDGYYRWSEIESMNVSDVEDQYKTRLE 216
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHI 395
+A NECC LVYTSGT G K VMLSHDNITF+ I++ ++ A S++S+LPLSH+
Sbjct: 217 NVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSYLPLSHV 276
Query: 396 AAQTVDIYSVMTVAATLWFADKNALK 421
AAQTVDIY+ VA +WFADK+ALK
Sbjct: 277 AAQTVDIYTCAFVAGCIWFADKDALK 302
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
+K+ +A++AK +L+HYM K+ S + Y++ + LI+SKVKQA+G DR S AAP
Sbjct: 341 LKKMLASWAKGITLKHYMVSQGKS-SGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAP 399
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 198
+S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+T+PG ++K ++ D G
Sbjct: 400 MSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANG 459
Query: 199 NGEICLK 205
+GE+C++
Sbjct: 460 HGELCIR 466
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + AI RAN +SISNAQK+QKF LP DFSIPTGELGPT+KVKR V K Y I
Sbjct: 602 KVWKSIEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEI 661
Query: 481 DKFY 484
+K Y
Sbjct: 662 EKLY 665
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +D TT +I + + G+ A+ PISVPGLL RT Y D AL K
Sbjct: 13 PNRLRQADAYRTTNRQDAVKIRMAKDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKN 72
Query: 66 EWKKVTYK 73
+ VTYK
Sbjct: 73 GYHTVTYK 80
>gi|21391980|gb|AAM48344.1| GM14009p [Drosophila melanogaster]
Length = 666
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 164/266 (61%), Gaps = 23/266 (8%)
Query: 178 DGVGR----TIPGTQTKIVDP-----------DEEGNGEICLKEYEANVRTVAKAFLKLG 222
DG+G ++PG + V+ + G + K+YE V VAKAF+KLG
Sbjct: 38 DGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLG 97
Query: 223 LERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDD 282
LE +HSV ++ FN EWFYS +GAI+A G AG+YTTNS +A H L +S A I VV+D
Sbjct: 98 LEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVVVDDA 157
Query: 283 KQLEKILKVKAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLE 336
KQ++KI ++ + PKLKA +Q + +P P G W E+ + + ++ LE
Sbjct: 158 KQMDKIHAIRDKLPKLKAAIQIQ-EPYSPYLKKEDGYYRWSEIESMNVSDVEDQYKTRLE 216
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHI 395
+A NECC LVYTSGT G K VMLSHDNITF+ I++ ++ A S++S+LPLSH+
Sbjct: 217 NVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSYLPLSHV 276
Query: 396 AAQTVDIYSVMTVAATLWFADKNALK 421
AAQTVDIY+ VA +WFADK+ALK
Sbjct: 277 AAQTVDIYTCAFVAGCIWFADKDALK 302
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
+K+ +A++AK +L+HYM K+ S + Y++ + LI+SKVKQA+G DR S AAP
Sbjct: 341 LKKMLASWAKGITLKHYMVSQGKS-SGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAP 399
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 198
+S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+T+PG ++K ++ D G
Sbjct: 400 MSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANG 459
Query: 199 NGEICLK 205
+GE+C++
Sbjct: 460 HGELCIR 466
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + AI RAN +SISNAQK+QKF LP DFSIPTGELGPT+KVKR V K Y I
Sbjct: 602 KVWKSIEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEI 661
Query: 481 DKFY 484
+K Y
Sbjct: 662 EKLY 665
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +D TT +I + + G+ A+ PISVPGLL RT Y D AL K
Sbjct: 13 PNRLRQADAYRTTNRQDAVKIRMAKDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKN 72
Query: 66 EWKKVTYK 73
+ VTYK
Sbjct: 73 GYHTVTYK 80
>gi|195164828|ref|XP_002023248.1| GL21255 [Drosophila persimilis]
gi|194105333|gb|EDW27376.1| GL21255 [Drosophila persimilis]
Length = 666
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/257 (45%), Positives = 163/257 (63%), Gaps = 19/257 (7%)
Query: 183 TIPGTQTKIVD--PD---------EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCI 231
+IPG + V+ PD + G + K+YE V VAKAF+K+GLE +HSV +
Sbjct: 47 SIPGLLKRTVNNFPDYPALRTKTGKTGYQTVTYKQYEEKVHQVAKAFIKIGLEEHHSVGV 106
Query: 232 IGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKV 291
+ FN EWFYS +GAI+A G AG+YTTNS +A LH L S A I VV+D KQ++KI +
Sbjct: 107 LAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVLHVLENSQAQIVVVDDSKQMDKIHSI 166
Query: 292 KAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLETIATNECCT 345
+ + P+LKA +Q + +P P G W E+ + + ++ LE IA NECC
Sbjct: 167 RDKLPQLKAAIQIQ-EPYAPYLKKEDGYYRWSEIESMNVSDVEDQYKTRLENIAINECCC 225
Query: 346 LVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHIAAQTVDIYS 404
LVYTSGT G K VMLSHDNI+F+ I + ++ + + S++S+LPLSH+AAQTVDIY+
Sbjct: 226 LVYTSGTVGMPKGVMLSHDNISFDTRGIAKSMERVVAGSESIVSYLPLSHVAAQTVDIYT 285
Query: 405 VMTVAATLWFADKNALK 421
++A +WFADK+ALK
Sbjct: 286 CASIAGCIWFADKDALK 302
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K+ IA +AK +L+HYMA K+ S + Y++ + LI+SKVKQA+G DR +S AAP+
Sbjct: 342 KKMIAGWAKGITLKHYMASQGKS-SGGFRYKIAKSLIMSKVKQALGFDRVITLVSAAAPM 400
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+T+PG ++K ++ D G+
Sbjct: 401 SPETKKYFLSLDLKILDAFGMSETAGCHTICLPDSLSLNSIGKTLPGCESKFINKDSNGH 460
Query: 200 GEICLK 205
GE+C++
Sbjct: 461 GELCIR 466
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 47/64 (73%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + I RAN SISNAQK+QKF LP DFSIPTGELGPT+KVKR V K Y I
Sbjct: 602 KVWKSIEDGIKRANKVSISNAQKVQKFSILPHDFSIPTGELGPTLKVKRNVVSKMYADEI 661
Query: 481 DKFY 484
+K Y
Sbjct: 662 EKLY 665
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +++ TT P +I + + G+ A+ PIS+PGLL RT +PD AL K
Sbjct: 13 PNRLRQAEVYRTTNPKDAVKIRMQKEGIGAEEPISIPGLLKRTVNNFPDYPALRTKTGKT 72
Query: 66 EWKKVTYK 73
++ VTYK
Sbjct: 73 GYQTVTYK 80
>gi|17933690|ref|NP_524698.1| bubblegum [Drosophila melanogaster]
gi|74947350|sp|Q9V3S9.1|BGM_DROME RecName: Full=Very long-chain-fatty-acid--CoA ligase bubblegum
gi|7298130|gb|AAF53368.1| bubblegum [Drosophila melanogaster]
gi|201065759|gb|ACH92289.1| FI05443p [Drosophila melanogaster]
Length = 666
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 164/266 (61%), Gaps = 23/266 (8%)
Query: 178 DGVGR----TIPGTQTKIVDP-----------DEEGNGEICLKEYEANVRTVAKAFLKLG 222
DG+G ++PG + V+ + G + K+YE V VAKAF+KLG
Sbjct: 38 DGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLG 97
Query: 223 LERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDD 282
LE +HSV ++ FN EWFYS +GAI+A G AG+YTTNS +A H L +S A I VV+D
Sbjct: 98 LEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVVVDDA 157
Query: 283 KQLEKILKVKAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLE 336
KQ++KI ++ + PKLKA +Q + +P P G W E+ + + ++ LE
Sbjct: 158 KQMDKIHAIRDKLPKLKAAIQIQ-EPYSPYLKKEDGYYRWSEIESMNVSDVEDQYMTRLE 216
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHI 395
+A NECC LVYTSGT G K VMLSHDNITF+ I++ ++ A S++S+LPLSH+
Sbjct: 217 NVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSYLPLSHV 276
Query: 396 AAQTVDIYSVMTVAATLWFADKNALK 421
AAQTVDIY+ VA +WFADK+ALK
Sbjct: 277 AAQTVDIYTCAFVAGCIWFADKDALK 302
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
+K+ +A++AK +L+HYM K+ S + Y++ + LI+SKVKQA+G DR S AAP
Sbjct: 341 LKKMLASWAKGITLKHYMVSQGKS-SGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAP 399
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 198
+S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+T+PG ++K ++ D G
Sbjct: 400 MSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANG 459
Query: 199 NGEICLK 205
+GE+C++
Sbjct: 460 HGELCIR 466
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + AI RAN +SISNAQK+QKF LP DFSIPTGELGPT+KVKR V K Y I
Sbjct: 602 KVWKSIEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEI 661
Query: 481 DKFY 484
+K Y
Sbjct: 662 EKLY 665
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +D TT +I + + G+ A+ PISVPGLL RT Y D AL K
Sbjct: 13 PNRLRQADAYRTTNRQDAVKIRMAKDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKN 72
Query: 66 EWKKVTYK 73
+ VTYK
Sbjct: 73 GYHTVTYK 80
>gi|125984908|ref|XP_001356218.1| GA18225 [Drosophila pseudoobscura pseudoobscura]
gi|54644537|gb|EAL33278.1| GA18225 [Drosophila pseudoobscura pseudoobscura]
Length = 666
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/257 (45%), Positives = 162/257 (63%), Gaps = 19/257 (7%)
Query: 183 TIPGTQTKIVD--PD---------EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCI 231
+IPG + V+ PD + G + K+YE V VAKAF+K+GLE +HSV +
Sbjct: 47 SIPGLLKRTVNNFPDYPALRTKTGKTGYQTVTYKQYEEKVHQVAKAFIKIGLEEHHSVGV 106
Query: 232 IGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKV 291
+ FN EWFYS +GAI+A G AG+YTTNS +A LH L S A I VV+D KQ++KI +
Sbjct: 107 LAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVLHVLENSQAQIVVVDDSKQMDKIHSI 166
Query: 292 KAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLETIATNECCT 345
+ + P LKA +Q + +P P G W E+ + + ++ LE IA NECC
Sbjct: 167 RDKLPHLKAAIQIQ-EPYAPYLKKEDGYYRWSEIESMNVSDVEDQYKTRLENIAINECCC 225
Query: 346 LVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHIAAQTVDIYS 404
LVYTSGT G K VMLSHDNI+F+ I + ++ + + S++S+LPLSH+AAQTVDIY+
Sbjct: 226 LVYTSGTVGMPKGVMLSHDNISFDTRGIAKSMERVVAGSESIVSYLPLSHVAAQTVDIYT 285
Query: 405 VMTVAATLWFADKNALK 421
++A +WFADK+ALK
Sbjct: 286 CASIAGCIWFADKDALK 302
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K+ IA +AK +L+HYMA K+ S + Y++ + LI+SKVKQA+G DR +S AAP+
Sbjct: 342 KKMIAGWAKGITLKHYMASQGKS-SGGFRYKIAKSLIMSKVKQALGFDRVITLVSAAAPM 400
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+T+PG ++K ++ D G+
Sbjct: 401 SPETKKYFLSLDLKILDAFGMSETAGCHTICLPDSLSLNSIGKTLPGCESKFINKDSNGH 460
Query: 200 GEICLK 205
GE+C++
Sbjct: 461 GELCIR 466
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 47/64 (73%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + I RAN SISNAQK+QKF LP DFSIPTGELGPT+KVKR V K Y I
Sbjct: 602 KVWKSIEDGIKRANKVSISNAQKVQKFSILPHDFSIPTGELGPTLKVKRNVVSKMYADEI 661
Query: 481 DKFY 484
+K Y
Sbjct: 662 EKLY 665
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +++ TT P +I + + G+ A+ PIS+PGLL RT +PD AL K
Sbjct: 13 PNRLRQAEVYRTTNPKDAVKIRMQKEGIGAEEPISIPGLLKRTVNNFPDYPALRTKTGKT 72
Query: 66 EWKKVTYK 73
++ VTYK
Sbjct: 73 GYQTVTYK 80
>gi|194860231|ref|XP_001969538.1| GG23906 [Drosophila erecta]
gi|190661405|gb|EDV58597.1| GG23906 [Drosophila erecta]
Length = 666
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/266 (44%), Positives = 163/266 (61%), Gaps = 23/266 (8%)
Query: 178 DGVGR----TIPGTQTKIVDP-----------DEEGNGEICLKEYEANVRTVAKAFLKLG 222
DG+G ++PG + V+ + G + K+YE V VAKAF+KLG
Sbjct: 38 DGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLG 97
Query: 223 LERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDD 282
LE +HSV ++ FN EWFYS +GAI+A G AG+YTTNS +A H L +S A I VV+D
Sbjct: 98 LEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVVVDDA 157
Query: 283 KQLEKILKVKAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLE 336
KQ++KI ++ + P LKA +Q + +P P G W E+ + + ++ LE
Sbjct: 158 KQMDKIHAIRDKLPNLKAAIQIQ-EPYSPYLKKEDGYYRWSEIESMNVSDVEDQYKTRLE 216
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHI 395
+A NECC LVYTSGT G K VMLSHDNITF+ I++ ++ A S++S+LPLSH+
Sbjct: 217 NVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSYLPLSHV 276
Query: 396 AAQTVDIYSVMTVAATLWFADKNALK 421
AAQTVDIY+ VA +WFADK+ALK
Sbjct: 277 AAQTVDIYTCAFVAGCIWFADKDALK 302
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
+K+ +A++AK +L+HYM K+ S + Y++ + LI+SKVKQA+G DR S AAP
Sbjct: 341 LKKMLASWAKGITLKHYMVSQGKS-SGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAP 399
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 198
+S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+T+PG ++K ++ D G
Sbjct: 400 MSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANG 459
Query: 199 NGEICLK 205
+GE+C++
Sbjct: 460 HGELCIR 466
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 48/64 (75%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+ + + AI RAN +SISNAQK+QKF LP DFSIPTGELGPT+KVKR V K Y I
Sbjct: 602 KVWTSIEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEI 661
Query: 481 DKFY 484
+K Y
Sbjct: 662 EKLY 665
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ ++ TT +I + + G+ A+ PISVPGLL RT Y D AL K
Sbjct: 13 PNRLRQAEAYRTTNREDAVKIRMAKDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGKN 72
Query: 66 EWKKVTYK 73
+ VTYK
Sbjct: 73 GYHTVTYK 80
>gi|195397770|ref|XP_002057501.1| GJ18165 [Drosophila virilis]
gi|194141155|gb|EDW57574.1| GJ18165 [Drosophila virilis]
Length = 668
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/257 (46%), Positives = 160/257 (62%), Gaps = 19/257 (7%)
Query: 183 TIPGTQTKIVD--PD---------EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCI 231
+IPG + V+ PD + G + K+YE V AKAF+KLGL+ +HSV +
Sbjct: 49 SIPGLLKRTVNNYPDYPALRTKNGKNGYTTVTYKQYEQKVHQTAKAFIKLGLQEHHSVGV 108
Query: 232 IGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKV 291
+ FN EWFYS +GAI+A G AG+YTTNS EA H L S A I VV+D KQ+EKI +
Sbjct: 109 LAFNCAEWFYSAMGAIHARGIIAGIYTTNSAEAVQHVLEDSRAQIVVVDDAKQMEKIHSI 168
Query: 292 KAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLETIATNECCT 345
+ + P LKA +Q + +P P G W E+ + A ++ R LE IA NECC
Sbjct: 169 RDKLPNLKAAIQIQ-EPYVPNLKKEDGYYRWSEIESMNVADVEDEFKRRLERIAINECCC 227
Query: 346 LVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHIAAQTVDIYS 404
LVYTSGT G K VMLSHDNI F+ I + K+ + +++S+LPLSH+AAQTVDIY+
Sbjct: 228 LVYTSGTVGMPKGVMLSHDNIAFDTRGIAKGLDKVVMGSEAMVSYLPLSHVAAQTVDIYT 287
Query: 405 VMTVAATLWFADKNALK 421
V ++A +WFADK+ALK
Sbjct: 288 VASMAGCIWFADKDALK 304
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K+ +A +AK +L+HYM K+ + + Y++ + LILSKVK A+G DR +S AAP+
Sbjct: 344 KKMLAGWAKGITLKHYMESQGKS-NGGFRYKIAKSLILSKVKAALGFDRVVSLVSAAAPM 402
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+++PG ++KI++ DE G+
Sbjct: 403 SPETKKYFLSLDMKILDAFGMSETAGCHTLCLPDSIHLNSIGKSLPGCESKIINQDENGH 462
Query: 200 GEICLK 205
GE+C++
Sbjct: 463 GELCIR 468
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 47/64 (73%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K+ + I RAN +SISNAQK+QKF LP DFSI TGELGPT+KVKR V K Y +I
Sbjct: 604 KVWKSIEDGIKRANKQSISNAQKVQKFAILPHDFSIATGELGPTLKVKRNVVNKMYADLI 663
Query: 481 DKFY 484
+ Y
Sbjct: 664 ETLY 667
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +++ TT P +I + + G+ A+ PIS+PGLL RT YPD AL K
Sbjct: 15 PNRLRAAEVYRTTNPEEAVKIRMHKEGLGAEEPISIPGLLKRTVNNYPDYPALRTKNGKN 74
Query: 66 EWKKVTYKLQTTGVKRWIANYAKSTSLQHY 95
+ VTYK V + + K +H+
Sbjct: 75 GYTTVTYKQYEQKVHQTAKAFIKLGLQEHH 104
>gi|189537572|ref|XP_001344904.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like [Danio
rerio]
Length = 674
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 146/221 (66%), Gaps = 5/221 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AK FLKLGLE++H V I+GFN+ EWF + +G ++AGG AG+YTTNSP+AC
Sbjct: 90 EYYHLCRMAAKGFLKLGLEQFHGVAILGFNSAEWFIAAVGTVFAGGIMAGIYTTNSPDAC 149
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDELMELG 323
LH S AN+ VVE+ KQL+KI++VK + P LKAIVQY G K + SW+E MELG
Sbjct: 150 LHVANDSRANVIVVENQKQLDKIMQVKDKLPHLKAIVQYSGSLKEKLANLYSWEEFMELG 209
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
D LD V+ N+CC L+YTSGT G+ K VMLSHDNIT+ A + ++ A
Sbjct: 210 LEVSDHELDEVISKQRANQCCVLIYTSGTTGSPKGVMLSHDNITWTAHHASRAGDMQPAE 269
Query: 384 L---SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ S++S+LPLSHIAAQ D+++ + + FA +ALK
Sbjct: 270 IRQESLVSYLPLSHIAAQIYDLWTGIKWGEQISFAQPDALK 310
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 19/193 (9%)
Query: 67 WKKVTYKLQTTGV------KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKV 120
W+K+ K++ G+ KR + +A S SL L+K+ + + + L LIL K+
Sbjct: 332 WEKIMEKIKE-GISRCGYMKRKMVTWAMSVSLDANQR-LKKDEEKSFLFTLAEKLILQKL 389
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
+ +G C SGAAPI E ++FL L+I + E +GMSE +G H +S P+ ++
Sbjct: 390 RAELGFSSCVKFFSGAAPIGRETLQFFLGLNIRLYEAYGMSETSGPHFMSGPEAYQFLSC 449
Query: 181 GRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWF 240
G+ +PG Q K+++ + +G+GE+C R V FL L + ++ + W
Sbjct: 450 GKVVPGCQYKLININADGSGEVCFWG-----RNVFMGFLNLEDKTKEAL-----DEDGWL 499
Query: 241 YS-DLGAIYAGGF 252
S DLG + GF
Sbjct: 500 RSGDLGKVDEDGF 512
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYK+ + I + N K+ SNAQ+IQK+ L DFS+ GELGPTMK++RP V++ Y + I+
Sbjct: 610 VYKSIEDGIGQVNSKATSNAQRIQKWTILDKDFSVAGGELGPTMKLRRPVVLQMYHNEIE 669
Query: 482 KFY 484
FY
Sbjct: 670 NFY 672
>gi|449266679|gb|EMC77703.1| Long-chain-fatty-acid--CoA ligase ACSBG2, partial [Columba livia]
Length = 588
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 141/208 (67%), Gaps = 5/208 (2%)
Query: 219 LKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICV 278
L+LGL+R+H VCI+GFN+ EWF +D+GAI AGG A G+YTTNSPEAC + ANI V
Sbjct: 3 LQLGLQRFHGVCILGFNSAEWFIADIGAILAGGLAVGIYTTNSPEACHYVADNCSANILV 62
Query: 279 VEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELGRAAPDESLDRVLE 336
VE+ KQL+KIL+++ + P LKAIVQY E K +P + SW E M LG PD L V++
Sbjct: 63 VENHKQLQKILEIQDRLPHLKAIVQYGEELKEKRPNLYSWSEFMALGEDVPDTQLREVIK 122
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC---IIQYFKLESAALSVISFLPLS 393
+ N+CC LVYTSGT G K VMLSHDN+T+ AA I + + V+S+LPLS
Sbjct: 123 SQKPNQCCMLVYTSGTTGHPKGVMLSHDNLTWTAAVAGRFIMHSHDKEKQERVVSYLPLS 182
Query: 394 HIAAQTVDIYSVMTVAATLWFADKNALK 421
HIAAQ DI+ +T A ++FA +ALK
Sbjct: 183 HIAAQMADIWLAVTFGAQVFFAQPDALK 210
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+++ G K R +A++AK LQ + ++ P + + R L+ +KV+
Sbjct: 232 WEKIEEKMKSIGAKSSSLRRKVASWAKGVGLQTNLKWMNGCSEVPVNFHIARHLVYNKVR 291
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRC +GAAPI+ E +FLSL+IP+ E++GMSE G HT+S F+L G
Sbjct: 292 KAIGLDRCTKCYTGAAPITRETLEFFLSLNIPVLELYGMSESTGPHTISLSHAFRLTSCG 351
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
R +PG +T I PD +GNGE+C
Sbjct: 352 REVPGCRTLIHKPDADGNGEVCF 374
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q I N +++SNAQK+QK+ L DFSI GELGPTMK+KRP VV+KY+ I
Sbjct: 511 VYAAIQKGISAVNERAVSNAQKVQKWVLLEKDFSIFGGELGPTMKLKRPEVVRKYKEQIA 570
Query: 482 KFY 484
+FY
Sbjct: 571 QFY 573
>gi|126323272|ref|XP_001376448.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Monodelphis domestica]
Length = 705
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 148/222 (66%), Gaps = 5/222 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
KEY R AK+F+KLGLER+H V I+GFNA EW S + AI+AGG A G+YTTNS EA
Sbjct: 121 KEYYELCRKAAKSFIKLGLERFHGVGILGFNAAEWLISAVAAIFAGGLAVGIYTTNSAEA 180
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDKPGVISWDELMEL 322
CL+ L +AN+ VVE++ QL+KI +VK Q P LKAI+QY G +P + +WDE + +
Sbjct: 181 CLYVLNHCEANVLVVENNFQLQKIFQVKDQLPHLKAIIQYRGHVLEKQPYIYTWDEFLAI 240
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G+ D +L+ ++ N+CCTL+YTSGT G K VMLSHDNIT++++ L+S
Sbjct: 241 GQCVVDGALEEIISCQKPNQCCTLIYTSGTTGNPKGVMLSHDNITWSSSTATGSLLLKSP 300
Query: 383 ALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +D++ M + +FA +ALK
Sbjct: 301 PDQQEIVVSYLPLSHIAAQMMDLWLPMKIGGITYFAQPDALK 342
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 106/192 (55%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ +++ G +K+ +A +AKS L + + + P +Y L +W++ SKV+
Sbjct: 364 WEKMQERMKAVGASAPLLKKKVAQWAKSVGLTTNIKRMN-GANYPTSYYLAKWMVYSKVR 422
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC SGAAP++ + +FLSLDIP+CE++GMSE G HT++ + FKL G
Sbjct: 423 VALGLDRCVQYFSGAAPLTKDTLEFFLSLDIPVCELYGMSESTGPHTINQRNSFKLMSCG 482
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G + + D +G GE+C R V +L + + ++ G W +
Sbjct: 483 KVMSGCKNMLHKKDSDGVGEVCFWG-----RHVFMGYLDMEEKTMEAIDEWG-----WLH 532
Query: 242 S-DLGAIYAGGF 252
S DLG + A GF
Sbjct: 533 SGDLGKLDALGF 544
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 40/63 (63%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A I N ++ISNAQKIQK+ L DFSI GELGPT K+KRP V K Y+ I
Sbjct: 642 VYAAIDKGIAAVNKEAISNAQKIQKWMLLKKDFSIFGGELGPTTKLKRPMVSKMYEREIR 701
Query: 482 KFY 484
FY
Sbjct: 702 SFY 704
>gi|405970299|gb|EKC35215.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Crassostrea gigas]
Length = 683
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 156/249 (62%), Gaps = 6/249 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y ++ + AKA +KLGLE H V I+GFN+PEWF ++ GAI+AGGF G+Y+TN+ +A
Sbjct: 45 QQYFSDTQKAAKALIKLGLEPLHGVGILGFNSPEWFIANNGAIFAGGFTVGIYSTNNADA 104
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDKPGVISWDELMEL 322
C + + S N+ VVE+++QL+KIL+V P LKA+VQY G+ + V SW E MEL
Sbjct: 105 CKYVALNSQCNVIVVENNQQLKKILQVWDDLPDLKAVVQYTGEVAEKRDNVYSWKEFMEL 164
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
D++L L +A N+ C L+YTSGT G K VMLSHDN+T+ A FK++
Sbjct: 165 SSQVSDDTLQHRLSLLAPNKACCLIYTSGTTGNPKGVMLSHDNLTWCAGTFSHSFKIQRD 224
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQ 442
+ ++++LPLSHIA Q VDIY M A ++FA +ALK+ A++ A L S Q
Sbjct: 225 SEVMVTYLPLSHIAGQIVDIYISMKYGAVVYFAKPDALKLCWTAGKAVENAALLYASEVQ 284
Query: 443 KIQKFEFLP 451
FLP
Sbjct: 285 ----LSFLP 289
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K+ I +AKS + +A + P +++ ++L+K K +G DRCR+ +SGAAPI
Sbjct: 359 KKKIGAWAKSVGYRTTIAEMNHE-PVPGAFKIAN-IMLNKAKGELGFDRCRIFMSGAAPI 416
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
E +F L IP+ EV+GMSEC+G HTV + D F+ VG IPG QTK+ D DEEGN
Sbjct: 417 MKETIEFFYGLHIPLMEVYGMSECSGPHTVCSLDRFRTSSVGTEIPGVQTKLADKDEEGN 476
Query: 200 GEI 202
GE+
Sbjct: 477 GEV 479
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 391 PLSHIAAQTVDIYSVMTVAATLW--FADKNALKVYKATQAAIDRANLKSISNAQKIQKFE 448
P ++ A TVD AT D V KA Q ID+AN ++IS AQKIQK+
Sbjct: 585 PTDNLTAVTVDWMKAQGSGATKVSDILDHKDAIVLKAIQKGIDKANERAISRAQKIQKWS 644
Query: 449 FLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
LP DFSIP GELGPTMK++RP V K Y ID FY
Sbjct: 645 ILPRDFSIPGGELGPTMKLRRPIVHKMYAKTIDAFY 680
>gi|354471433|ref|XP_003497947.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Cricetulus
griseus]
Length = 719
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/225 (50%), Positives = 150/225 (66%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R VAK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 128 ISYYQYYLISRKVAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 187
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDK-PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ P LKA+V Y+ P K P V + DEL
Sbjct: 188 PEACQYIAHDCRANVIVVDTQKQLEKILKIWKDLPHLKAVVIYQDPLPKKMPNVYTMDEL 247
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG+ P+++LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 248 MELGQEMPEKALDTIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 307
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FAD +ALK
Sbjct: 308 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALK 352
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 374 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPSDDL-KPFTSRLADYLVLAKVR 432
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E R+FL L+I + +G+SE G H +S+P +++L G
Sbjct: 433 QALGFAKCQKNFYGAAPMTAETLRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSG 492
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R +PG + K+V+ D +G GEICL RT+ +L + + ++ ++ W +
Sbjct: 493 RVVPGCRVKLVNQDADGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DSEGWLH 542
Query: 242 S-DLGAIYAGGF 252
+ D+G + A GF
Sbjct: 543 TGDMGRLDADGF 554
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A Q I R N + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 652 VYQAIQEGIQRVNANAAARPYHIQKWAILKRDFSISGGELGPTMKLKRLTVLEKYKDIID 711
Query: 482 KFY 484
FY
Sbjct: 712 AFY 714
>gi|149716710|ref|XP_001496004.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Equus
caballus]
Length = 723
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 147/222 (66%), Gaps = 8/222 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R A+A +KLGLER+H V I+GFN+ EWF S LGAI AGG G+Y TNSPEAC
Sbjct: 139 YEA-CRKAARALIKLGLERFHGVGILGFNSVEWFVSSLGAILAGGLCVGIYATNSPEACQ 197
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE---GKPDKPGVISWDELMEL 322
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY+ + + SWD+ MEL
Sbjct: 198 YVITQAKVNILLVENDEQLQKILSIPQSSLETLKAIIQYKLPMKESSANNLYSWDDFMEL 257
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G + PD LDR++E+ N+C L+YTSGT G K VMLSHDNIT+ A + +L A
Sbjct: 258 GSSIPDSQLDRIMESQRANQCAVLIYTSGTVGPPKGVMLSHDNITWTAGAAARDNRLSHA 317
Query: 383 ALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A V+S+LPLSHIAAQ +DI+ M V A +FA +ALK
Sbjct: 318 AEKQEVVVSYLPLSHIAAQMMDIWIPMKVGAVTYFAQPDALK 359
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ +G K + + ++A++T L+ + P +YR+ + L+ SKV+
Sbjct: 381 WEKMQDKIKESGAKSSSLRKKVFSWARATGLKVNKKRMLGPYDIPMSYRMAKALVFSKVR 440
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLD C +SGAAP+S E +FLSLDIPI E++GMSE +G HT S D++++ G
Sbjct: 441 SALGLDHCHSFISGAAPLSHETSEFFLSLDIPIGEMYGMSESSGPHTTSNYDNYRVLSCG 500
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ + G + + ++ GEIC+
Sbjct: 501 KIMSGCKNMLYQQSKDSTGEICM 523
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q ID N +++SNAQKIQK+ L DFSI GELGPT K++R ++ +KY+ ID
Sbjct: 660 VYKAIQQGIDAVNQEAVSNAQKIQKWVILARDFSISGGELGPTTKIRRHYISEKYKRQID 719
Query: 482 KFY 484
Y
Sbjct: 720 NLY 722
>gi|345327756|ref|XP_001513296.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Ornithorhynchus anatinus]
Length = 654
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 150/227 (66%), Gaps = 6/227 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ K+Y R A+AFLKLGLER+ V I+GFN+ EW +D+GAI AGG A G+YTTN
Sbjct: 63 KLTYKQYYVECRKAARAFLKLGLERFRGVGILGFNSAEWLIADVGAILAGGLAVGIYTTN 122
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQY--EGKPDKPGVISWD 317
S EAC + S+ANI VVE+DKQL+KIL+V ++ LKAIVQY E K +P + SW
Sbjct: 123 SAEACHYVAEHSEANILVVENDKQLQKILEVSSSKLKHLKAIVQYQEEVKQKRPNLYSWA 182
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
E + L PD LD+++E+ +CC L+YTSGT G K VMLS DNIT+ + Q F
Sbjct: 183 EFLALANEVPDSLLDQIIESQKPTQCCMLIYTSGTTGQPKGVMLSQDNITWTSMAATQDF 242
Query: 378 KLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+L + V+SFLPLSH+AAQ +D++ M V A+ +FA +ALK
Sbjct: 243 QLGHPPDNQEVVVSFLPLSHVAAQMMDVWLPMKVGASTYFAQPDALK 289
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 109/192 (56%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ TG +KR +A +AK LQ + + P +RL + L+ KVK
Sbjct: 311 WEKMEEKMKATGAKSSALKRKVAVWAKEVGLQTNLKRMNGCTDIPVNFRLAKHLVFKKVK 370
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRCR+ SGAAP++ E +FLSL+IP+CE++GMSE G H+VS P K+ G
Sbjct: 371 KALGLDRCRLCFSGAAPMTKETIEFFLSLNIPVCELYGMSESTGPHSVSRPTSLKIMSCG 430
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+++ G +TK+ + D E GE+C R V +L + ++ V +A W +
Sbjct: 431 KSMLGCKTKLHNIDSEETGEVCFWG-----RHVFMGYLNME-DKTKEV----LDAEGWLH 480
Query: 242 S-DLGAIYAGGF 252
S DLG + GF
Sbjct: 481 SGDLGKLDKNGF 492
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V+ A Q ID N K+ISNAQKIQK+ L DFS+ GELGPTMK+KRP VVK Y+ I
Sbjct: 590 VFAAIQKGIDAVNEKAISNAQKIQKWTILEKDFSVSGGELGPTMKLKRPVVVKMYKDQIS 649
Query: 482 KFY 484
FY
Sbjct: 650 SFY 652
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 15 LYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKVTYK 73
L+T+ H + L E G+A PP++V + + +Y D +AL K+ + W K+TYK
Sbjct: 10 LWTSRRHEEVSLRLEECGIANVPPMTVHEMFEESVRRYGDYIALGSKKGD-SWHKLTYK 67
>gi|348505603|ref|XP_003440350.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like
[Oreochromis niloticus]
Length = 695
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/226 (48%), Positives = 150/226 (66%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I EY R AK+FLKLGLER+H V I+GFN+ EWF+S +GAI AGG AG+Y TN
Sbjct: 105 KITFLEYYQLCRRTAKSFLKLGLERFHGVGILGFNSAEWFFSAVGAIMAGGIMAGIYATN 164
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDE 318
SP+AC + S ANI VVE+ KQLEKIL++ + P LKAIVQY G+ + + SW+E
Sbjct: 165 SPDACHYVASDSKANIIVVENQKQLEKILQICDRLPNLKAIVQYSGQVQQKISNLYSWEE 224
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
MELG ++ LD ++ + N+CC L+YTSGT G K VMLSHDNIT+ A + +
Sbjct: 225 FMELGLDVSEKQLDDIISSQRANQCCVLIYTSGTTGKPKGVMLSHDNITWTAIHASRAGE 284
Query: 379 LESAAL---SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ A S++S+LPLSHIAAQ D+++ + ++FA +ALK
Sbjct: 285 MQPADTKQESLVSYLPLSHIAAQIYDLWTGIHWGELVYFAQPDALK 330
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 24 TRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKVTYKLQTTG-VKRW 82
T IH GE AQP L+ P + +K+ ++ G +K+
Sbjct: 313 TGIHWGELVYFAQPDALKGSLITTLREARPTSHMGVPRVWEKMMEKIKQEISQCGYLKKK 372
Query: 83 IANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTE 142
+ +A S S + +N +P+ + + L+L K++ +GL C+ SGAAPIS+E
Sbjct: 373 LVTWAMSVSQETNQKCTHENDEKPFLFYVADSLVLQKLRNELGLSCCQKFFSGAAPISSE 432
Query: 143 LKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEI 202
++FL L+I + E +GMSE +G H +S P +KL G+ +PG + K+ + D EG GEI
Sbjct: 433 TVQFFLGLNIRLYEAYGMSESSGPHFMSGPKAYKLPSCGKVVPGCRYKLANVDCEGTGEI 492
Query: 203 CLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
C R + FL + + ++ + W +S DLG + GF
Sbjct: 493 CFWG-----RNIFMGFLNMEDKTREAL-----DEDGWLHSGDLGKVDEEGF 533
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+A Q IDR N + SNAQ+IQK+ L DFS+ GELGPTMK++RP V++ Y +I
Sbjct: 630 EVYQAIQKGIDRVNSAATSNAQRIQKWTILRKDFSVSGGELGPTMKLRRPVVLEMYCKVI 689
Query: 481 DKFY 484
+ Y
Sbjct: 690 ESLY 693
>gi|149041706|gb|EDL95547.1| acyl-CoA synthetase bubblegum family member 1, isoform CRA_b
[Rattus norvegicus]
Length = 655
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 149/225 (66%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R VAK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 171 ISYYQYYLIARKVAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 230
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ P LKA+V Y+ P K V + +EL
Sbjct: 231 PEACQYIAHDCRANVIVVDTQKQLEKILKIWKDLPHLKAVVIYQEPPPKKMANVYTMEEL 290
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+ELG+ P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 291 IELGQEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 350
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FAD +ALK
Sbjct: 351 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALK 395
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + N +P+T RL +L+L++V+
Sbjct: 417 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLT-CPSNDLKPFTSRLADYLVLARVR 475
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E +R+FL L+I + +G+SE G H +S+P +++L G
Sbjct: 476 QALGFAKCQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSG 535
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R +PG + K+V+ D +G GEICL RT+ +L + + + ++ ++ W +
Sbjct: 536 RVVPGCRVKLVNQDADGIGEICLWG-----RTIFMGYLNMEDKTHEAI-----DSEGWLH 585
Query: 242 S-DLGAIYAGGF 252
+ D+G + GF
Sbjct: 586 TGDMGRLDDDGF 597
>gi|16716465|ref|NP_444408.1| long-chain-fatty-acid--CoA ligase ACSBG1 [Mus musculus]
gi|81903322|sp|Q99PU5.1|ACBG1_MOUSE RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG1; AltName:
Full=Acyl-CoA synthetase bubblegum family member 1;
Short=mBG1; AltName: Full=Gonadotropin-regulated long
chain acyl CoA synthetase; Short=GR-LACS; AltName:
Full=Lipidosin
gi|13094204|dbj|BAB32783.1| lipidosis-related protein Lipidosin [Mus musculus]
gi|26344001|dbj|BAC35657.1| unnamed protein product [Mus musculus]
gi|34980840|gb|AAH57322.1| Acyl-CoA synthetase bubblegum family member 1 [Mus musculus]
gi|66932729|gb|AAY58226.1| gonadotropin-regulated long chain acyl CoA synthetase [Mus
musculus]
gi|148693876|gb|EDL25823.1| acyl-CoA synthetase bubblegum family member 1 [Mus musculus]
Length = 721
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 149/225 (66%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R VAK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 130 ISYYQYYLIARKVAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 189
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ P LKA+V Y+ P K V + +EL
Sbjct: 190 PEACQYISHDCRANVIVVDTQKQLEKILKIWKDLPHLKAVVIYQEPPPKKMANVYTMEEL 249
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+ELG+ P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 250 IELGQEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 309
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FAD +ALK
Sbjct: 310 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALK 354
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + N +P+T RL +L+L++V+
Sbjct: 376 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLT-CPSNDLKPFTSRLADYLVLARVR 434
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E +R+FL L+I + +G+SE G H +S+P +++L G
Sbjct: 435 QALGFAKCQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSG 494
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R +PG + K+V+ D +G GEICL RT+ +L + + ++ ++ W +
Sbjct: 495 RVVPGCRVKLVNQDADGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DSEGWLH 544
Query: 242 S-DLGAIYAGGF 252
+ D+G + A GF
Sbjct: 545 TGDMGRLDADGF 556
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A I R N + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 654 VYQAIHEGIQRVNANAAARPYHIQKWAILQRDFSISGGELGPTMKLKRLTVLEKYKDIID 713
Query: 482 KFY 484
FY
Sbjct: 714 SFY 716
>gi|19705503|ref|NP_599216.1| long-chain-fatty-acid--CoA ligase ACSBG1 [Rattus norvegicus]
gi|81902685|sp|Q924N5.1|ACBG1_RAT RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG1; AltName:
Full=Acyl-CoA synthetase bubblegum family member 1;
AltName: Full=Gonadotropin-regulated long chain acyl CoA
synthetase; Short=GR-LACS
gi|11493980|gb|AAG35729.1|AF208125_1 gonadotropin-regulated long chain acyl-CoA synthetase [Rattus
norvegicus]
Length = 721
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 149/225 (66%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R VAK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 130 ISYYQYYLIARKVAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 189
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ P LKA+V Y+ P K V + +EL
Sbjct: 190 PEACQYIAHDCRANVIVVDTQKQLEKILKIWKDLPHLKAVVIYQEPPPKKMANVYTMEEL 249
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+ELG+ P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 250 IELGQEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 309
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FAD +ALK
Sbjct: 310 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALK 354
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + N +P+T RL +L+L++V+
Sbjct: 376 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLT-CPSNDLKPFTSRLADYLVLARVR 434
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E +R+FL L+I + +G+SE G H +S+P +++L G
Sbjct: 435 QALGFAKCQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSG 494
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R +PG + K+V+ D +G GEICL RT+ +L + + + ++ ++ W +
Sbjct: 495 RVVPGCRVKLVNQDADGIGEICLWG-----RTIFMGYLNMEDKTHEAI-----DSEGWLH 544
Query: 242 S-DLGAIYAGGF 252
+ D+G + GF
Sbjct: 545 TGDMGRLDDDGF 556
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A I R N + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 654 VYQAIHEGIQRVNANAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEKYKDIID 713
Query: 482 KFY 484
FY
Sbjct: 714 SFY 716
>gi|194380172|dbj|BAG63853.1| unnamed protein product [Homo sapiens]
Length = 638
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 206 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 302
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 337 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 505
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQ+I+K+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 575 VYKAIQQGINAVNQEAMNNAQRIEKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 634
Query: 482 KFY 484
Y
Sbjct: 635 HMY 637
>gi|149041705|gb|EDL95546.1| acyl-CoA synthetase bubblegum family member 1, isoform CRA_a
[Rattus norvegicus]
Length = 617
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 149/225 (66%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R VAK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 26 ISYYQYYLIARKVAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 85
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ P LKA+V Y+ P K V + +EL
Sbjct: 86 PEACQYIAHDCRANVIVVDTQKQLEKILKIWKDLPHLKAVVIYQEPPPKKMANVYTMEEL 145
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+ELG+ P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 146 IELGQEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 205
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FAD +ALK
Sbjct: 206 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALK 250
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + N +P+T RL +L+L++V+
Sbjct: 272 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLT-CPSNDLKPFTSRLADYLVLARVR 330
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E +R+FL L+I + +G+SE G H +S+P +++L G
Sbjct: 331 QALGFAKCQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSG 390
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R +PG + K+V+ D +G GEICL RT+ +L + + + ++ ++ W +
Sbjct: 391 RVVPGCRVKLVNQDADGIGEICLWG-----RTIFMGYLNMEDKTHEAI-----DSEGWLH 440
Query: 242 S-DLGAIYAGGF 252
+ D+G + GF
Sbjct: 441 TGDMGRLDDDGF 452
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A I R N + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 550 VYQAIHEGIQRVNANAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEKYKDIID 609
Query: 482 KFY 484
FY
Sbjct: 610 SFY 612
>gi|195031684|ref|XP_001988376.1| GH11132 [Drosophila grimshawi]
gi|193904376|gb|EDW03243.1| GH11132 [Drosophila grimshawi]
Length = 668
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/257 (45%), Positives = 159/257 (61%), Gaps = 19/257 (7%)
Query: 183 TIPGTQTKIVD--PD---------EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCI 231
+IPG + V+ PD + G + K+YE V AKAF+KLGL+ + SV +
Sbjct: 49 SIPGLLKRTVNNYPDYPALRTKNGKTGYTTVTYKQYEQKVHQTAKAFIKLGLQEHCSVGV 108
Query: 232 IGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKV 291
+ FN EWFYS +GAI+A G AG+YTTNS EA H L S + I +V+D KQ+EKI +
Sbjct: 109 LAFNCAEWFYSAMGAIHARGIIAGIYTTNSAEAVFHVLEDSRSQIVIVDDAKQMEKIQSI 168
Query: 292 KAQCPKLKAIVQYEGKPDKP------GVISWDELMELGRAAPDESLDRVLETIATNECCT 345
+ + P LKA VQ + +P P G W E+ + + ++ R LE IA NECC
Sbjct: 169 RDRLPNLKAAVQIQ-EPYAPNLKKEDGYYRWSEIESMNVSDVEDEYKRRLERIAINECCC 227
Query: 346 LVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVISFLPLSHIAAQTVDIYS 404
LVYTSGT G K VMLSHDNITF+ I + K+ + +++S+LPLSH+AAQ VDIY+
Sbjct: 228 LVYTSGTVGMPKGVMLSHDNITFDLRGITKTLDKVVMGSENMVSYLPLSHVAAQIVDIYT 287
Query: 405 VMTVAATLWFADKNALK 421
V ++A +WFADK+ALK
Sbjct: 288 VSSMAGCIWFADKDALK 304
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K+ +A +AK +L+HYM E S + Y++ + LILSKVK A+G DR +S AAP+
Sbjct: 344 KKMLAGWAKGITLKHYMES-EGKSSGGFRYKIAKSLILSKVKAALGFDRVVSLVSAAAPM 402
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
S E K+YFLSLD+ I + FGMSE AG HT+ PD L+ +G+++PG ++KI++ DE G+
Sbjct: 403 SPETKKYFLSLDLKILDGFGMSETAGCHTLCQPDSTLLNSIGKSMPGCESKIINQDENGH 462
Query: 200 GEICLK 205
GE+C++
Sbjct: 463 GELCIR 468
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+KA + AI RAN +SISNAQK+QKF LP DFSI TGELGPT+KVKRP V K Y +I
Sbjct: 604 KVWKAIEDAIKRANKQSISNAQKVQKFAILPHDFSIVTGELGPTLKVKRPIVNKMYADMI 663
Query: 481 DKFY 484
+ Y
Sbjct: 664 ETLY 667
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ +S++ TT P +I + + G+ A+ P+S+PGLL RT YPD AL K
Sbjct: 15 PNRLRESEVYRTTNPEEAVKIRMHKEGLGAEEPLSIPGLLKRTVNNYPDYPALRTKNGKT 74
Query: 66 EWKKVTYK 73
+ VTYK
Sbjct: 75 GYTTVTYK 82
>gi|58476765|gb|AAH90046.1| Acyl-CoA synthetase bubblegum family member 2 [Homo sapiens]
Length = 666
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 206 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 302
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 337 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 505
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQ+I+K+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 603 VYKAIQQGINAVNQEAMNNAQRIEKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 662
Query: 482 KFY 484
Y
Sbjct: 663 HMY 665
>gi|37182651|gb|AAQ89126.1| PRTD-NY3 [Homo sapiens]
Length = 616
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 37 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 95
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 96 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 155
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 156 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHE 215
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 216 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 252
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 287 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 346
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 347 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 406
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 407 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 455
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQ+I+K+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 553 VYKAIQQGINAVNQEAMNNAQRIEKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 612
Query: 482 KFY 484
Y
Sbjct: 613 HMY 615
>gi|12053213|emb|CAB66788.1| hypothetical protein [Homo sapiens]
gi|32968194|emb|CAE12156.1| bubblegum related protein [Homo sapiens]
gi|190690853|gb|ACE87201.1| acyl-CoA synthetase bubblegum family member 2 protein [synthetic
construct]
Length = 666
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 206 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 302
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 337 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 505
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQ+I+K+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 603 VYKAIQQGINAVNQEAMNNAQRIEKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 662
Query: 482 KFY 484
Y
Sbjct: 663 HMY 665
>gi|18314434|gb|AAH22027.1| ACSBG2 protein [Homo sapiens]
gi|123979860|gb|ABM81759.1| acyl-CoA synthetase bubblegum family member 2 [synthetic construct]
gi|123994625|gb|ABM84914.1| acyl-CoA synthetase bubblegum family member 2 [synthetic construct]
Length = 666
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 206 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 302
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 337 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 505
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 603 VYKAIQQGINAVNQEAMNNAQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 662
Query: 482 KFY 484
Y
Sbjct: 663 HMY 665
>gi|32968195|emb|CAE12157.1| bubblegum related protein [Homo sapiens]
Length = 649
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 70 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 128
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 129 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 188
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 189 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHE 248
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 249 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 285
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 320 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 379
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 380 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 439
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 440 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 488
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQ+I+K+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 586 VYKAIQQGINAVNQEAMNNAQRIEKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 645
Query: 482 KFY 484
Y
Sbjct: 646 HMY 648
>gi|195115806|ref|XP_002002447.1| GI12714 [Drosophila mojavensis]
gi|193913022|gb|EDW11889.1| GI12714 [Drosophila mojavensis]
Length = 668
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/234 (47%), Positives = 148/234 (63%), Gaps = 8/234 (3%)
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
D+ G + K+YE V AKAF+KLGL+ +HSV ++ FN EWFYS +GAI+A G A
Sbjct: 72 DKNGYTTVTYKQYEQKVHQTAKAFIKLGLQEHHSVGVLAFNCAEWFYSAMGAIHARGIIA 131
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP--- 311
G+YTTNS EA H L S A I VV+D KQ++KI ++ + P LKA VQ + +P P
Sbjct: 132 GIYTTNSAEAVQHVLENSRAQIVVVDDAKQMDKIHSIRDKLPNLKAAVQIQ-EPYAPYLK 190
Query: 312 ---GVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
G W E+ + ++ R LE IA NECC LVYTSGT G K VMLSHDNI++
Sbjct: 191 KEDGYYRWSEIEAMNVEDVEDEYKRRLENIAINECCCLVYTSGTVGMPKGVMLSHDNISY 250
Query: 369 NAACIIQYF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ I + K+ A ++S+LPLSH+AAQ VDIY++ + +WFADK+ALK
Sbjct: 251 DTRGIGKGLEKIVLGAECMVSYLPLSHVAAQVVDIYAIASFGGCIWFADKDALK 304
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
KR +A +AK SL+HYM K+ S +Y++ R LILSKVK A+G DR ++ AAP+
Sbjct: 344 KRMLAGWAKGVSLKHYMENQGKS-SGSLSYKIARSLILSKVKAALGFDRVISLVTAAAPM 402
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
S E K+YFLSLD+ I + FGMSE G HT+ PD L+ +G+++PG ++KI++ DE G+
Sbjct: 403 SPETKKYFLSLDMKILDAFGMSETGGCHTLCLPDSTLLNSIGKSLPGCESKIINQDENGH 462
Query: 200 GEICLK 205
GE+C++
Sbjct: 463 GELCIR 468
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 46/64 (71%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV K+ + I RAN +SISNAQK+QKF LP DFSI TGELGPT+KVKR V K Y +I
Sbjct: 604 KVLKSIEDGIKRANKQSISNAQKVQKFAILPHDFSIATGELGPTLKVKRNVVNKMYADLI 663
Query: 481 DKFY 484
+ Y
Sbjct: 664 ETLY 667
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
PN++ S++ TT+P +I + + G+ A+ PIS+PGLL RT +PD AL K +
Sbjct: 15 PNRLRQSEVYRTTDPEEAVKIRMQKEGLGAEEPISIPGLLKRTVNNFPDYPALRFKNDKN 74
Query: 66 EWKKVTYKLQTTGVKRWIANYAKSTSLQHY 95
+ VTYK V + + K +H+
Sbjct: 75 GYTTVTYKQYEQKVHQTAKAFIKLGLQEHH 104
>gi|190689495|gb|ACE86522.1| acyl-CoA synthetase bubblegum family member 2 protein [synthetic
construct]
Length = 666
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 206 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAMTKDFKLTDKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 302
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 337 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 505
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQ+I+K+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 603 VYKAIQQGINAVNQEAMNNAQRIEKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 662
Query: 482 KFY 484
Y
Sbjct: 663 HMY 665
>gi|37360022|dbj|BAC97989.1| mKIAA0631 protein [Mus musculus]
Length = 724
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 149/225 (66%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R VAK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYYQYYLIARKVAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ P LKA+V Y+ P K V + +EL
Sbjct: 193 PEACQYISHDCRANVIVVDTQKQLEKILKIWKDLPHLKAVVIYQEPPPKKMANVYTMEEL 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+ELG+ P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 IELGQEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWIARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FAD +ALK
Sbjct: 313 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALK 357
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + N +P+T RL +L+L++V+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLT-CPSNDLKPFTSRLADYLVLARVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E +R+FL L+I + +G+SE G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R +PG + K+V+ D +G GEICL RT+ +L + + ++ ++ W +
Sbjct: 498 RVVPGCRVKLVNQDADGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DSEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D+G + A GF
Sbjct: 548 TGDMGRLDADGF 559
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A I R N + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 657 VYQAIHEGIQRVNANAAARPYHIQKWAILQRDFSISGGELGPTMKLKRLTVLEKYKDIID 716
Query: 482 KFY 484
FY
Sbjct: 717 SFY 719
>gi|395822877|ref|XP_003784732.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG1 [Otolemur garnettii]
Length = 845
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/226 (49%), Positives = 147/226 (65%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
I +Y R AK+FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+
Sbjct: 196 HISYSQYYLLARRAAKSFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTS 255
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDE 318
SPEAC + AN+ VV+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 256 SPEACQYIAHDCRANVIVVDTQKQLEKILKIWKQLPHLKAVVMYKEPPPEKTANVYTMEE 315
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
MELG P+ESLD ++ N+CC LVYTSGT G K VMLS DNIT+ A Q
Sbjct: 316 FMELGNEVPEESLDAIINDQQPNQCCVLVYTSGTTGPPKGVMLSQDNITWTARYGSQAGD 375
Query: 379 LESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 376 IQPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 421
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 443 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPSSDL-KPFTTRLADYLVLAKVR 501
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ S GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 502 QALGFAKCQKSFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 561
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ G W +
Sbjct: 562 KVVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTREAIDEDG-----WLH 611
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 612 TGDAGHLDADGF 623
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GE GPTMK+KR V++KY+ IID
Sbjct: 721 VYQAIEEGIQRVNMNAAARPYHIQKWAILERDFSISGGEFGPTMKLKRLTVLEKYKDIID 780
Query: 482 KFY 484
FY
Sbjct: 781 SFY 783
>gi|397497145|ref|XP_003819376.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 2 [Pan
paniscus]
Length = 638
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + F+L
Sbjct: 206 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFQLTDKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 302
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 337 KSTGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 505
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A Q I+ N ++++NAQKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 575 VYEAIQQGINAVNQEAMNNAQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 634
Query: 482 KFY 484
Y
Sbjct: 635 HMY 637
>gi|296232645|ref|XP_002761666.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 2
[Callithrix jacchus]
Length = 638
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 161/255 (63%), Gaps = 5/255 (1%)
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHS 228
++ P+ F+ + V R GT + + + G + +Y AK+F+KLGLER+H
Sbjct: 51 MTIPEFFR-ESVNRF--GTYPALAFKNSKKWGVLNFNQYYKACWKAAKSFIKLGLERFHG 107
Query: 229 VCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKI 288
V I+GFN+ EWF + LGAI AGG G+Y TNS EAC + + + NI +VE+D+QLEKI
Sbjct: 108 VGILGFNSAEWFITALGAILAGGLCVGIYATNSAEACQYVITNAKVNILLVENDQQLEKI 167
Query: 289 LKV-KAQCPKLKAIVQYE-GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTL 346
L + +++ LKAI+QY + + SWD+ MELGR+ PD L++V+++ N+C +
Sbjct: 168 LSIPQSRLEPLKAIIQYRLPVKNSNNLYSWDDFMELGRSIPDTQLEKVIQSQKANQCAVI 227
Query: 347 VYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM 406
+YTSGT G K VMLSHDNIT+ A + + KL V+S+LPLSHIAAQ +DI+ +
Sbjct: 228 IYTSGTTGIPKGVMLSHDNITWTAGAVAKDLKLTEKHEMVVSYLPLSHIAAQMMDIWIPI 287
Query: 407 TVAATLWFADKNALK 421
+ A +FA +AL+
Sbjct: 288 KIGALTYFAQPDALR 302
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 99/177 (55%), Gaps = 11/177 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+++ + +A++ + + + +YR+ + L+ SKVK ++GLD C +SGA
Sbjct: 339 TGLRKKVFVWARNIGFKINSKKMLGKYNTHMSYRMAKTLVFSKVKMSLGLDHCHSFISGA 398
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
AP++ E +FLSLD+PI E++G++E +G HT+S ++++L G+ + G + +V +
Sbjct: 399 APLNQETAEFFLSLDLPIGELYGLTESSGPHTISNQNNYRLLSCGKILTGCKNMLVQQSK 458
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
G GEICL R + +L+ E ++ + W +S DLG + + GF
Sbjct: 459 HGTGEICLWG-----RHIFMGYLESEAETTKAI-----DEEGWLHSGDLGQLDSLGF 505
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++ SNAQKIQK+ L DFSI GELGPTMK+KR F+ +KY+ ID
Sbjct: 575 VYKAIQEGINDVNQEATSNAQKIQKWVILEKDFSIYGGELGPTMKLKRHFIAQKYKKQID 634
Query: 482 KFY 484
+ Y
Sbjct: 635 QMY 637
>gi|397497143|ref|XP_003819375.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 1 [Pan
paniscus]
gi|397497147|ref|XP_003819377.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 3 [Pan
paniscus]
Length = 666
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + F+L
Sbjct: 206 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFQLTDKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 302
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 337 KSTGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 505
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A Q I+ N ++++NAQKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 603 VYEAIQQGINAVNQEAMNNAQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 662
Query: 482 KFY 484
Y
Sbjct: 663 HMY 665
>gi|350538773|ref|NP_001233536.1| long-chain-fatty-acid--CoA ligase ACSBG2 [Pan troglodytes]
gi|343958880|dbj|BAK63295.1| bubblegum related protein [Pan troglodytes]
gi|343959840|dbj|BAK63777.1| bubblegum related protein [Pan troglodytes]
Length = 666
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 147/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + F+L
Sbjct: 206 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFQLTDKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 302
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 337 KSTGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 505
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A Q I+ N ++++NAQKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 603 VYEAIQQGINAVNQEAMNNAQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 662
Query: 482 KFY 484
Y
Sbjct: 663 HMY 665
>gi|296232643|ref|XP_002761665.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 1
[Callithrix jacchus]
Length = 666
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 161/255 (63%), Gaps = 5/255 (1%)
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHS 228
++ P+ F+ + V R GT + + + G + +Y AK+F+KLGLER+H
Sbjct: 51 MTIPEFFR-ESVNRF--GTYPALAFKNSKKWGVLNFNQYYKACWKAAKSFIKLGLERFHG 107
Query: 229 VCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKI 288
V I+GFN+ EWF + LGAI AGG G+Y TNS EAC + + + NI +VE+D+QLEKI
Sbjct: 108 VGILGFNSAEWFITALGAILAGGLCVGIYATNSAEACQYVITNAKVNILLVENDQQLEKI 167
Query: 289 LKV-KAQCPKLKAIVQYE-GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTL 346
L + +++ LKAI+QY + + SWD+ MELGR+ PD L++V+++ N+C +
Sbjct: 168 LSIPQSRLEPLKAIIQYRLPVKNSNNLYSWDDFMELGRSIPDTQLEKVIQSQKANQCAVI 227
Query: 347 VYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM 406
+YTSGT G K VMLSHDNIT+ A + + KL V+S+LPLSHIAAQ +DI+ +
Sbjct: 228 IYTSGTTGIPKGVMLSHDNITWTAGAVAKDLKLTEKHEMVVSYLPLSHIAAQMMDIWIPI 287
Query: 407 TVAATLWFADKNALK 421
+ A +FA +AL+
Sbjct: 288 KIGALTYFAQPDALR 302
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 99/177 (55%), Gaps = 11/177 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+++ + +A++ + + + +YR+ + L+ SKVK ++GLD C +SGA
Sbjct: 339 TGLRKKVFVWARNIGFKINSKKMLGKYNTHMSYRMAKTLVFSKVKMSLGLDHCHSFISGA 398
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
AP++ E +FLSLD+PI E++G++E +G HT+S ++++L G+ + G + +V +
Sbjct: 399 APLNQETAEFFLSLDLPIGELYGLTESSGPHTISNQNNYRLLSCGKILTGCKNMLVQQSK 458
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
G GEICL R + +L+ E ++ + W +S DLG + + GF
Sbjct: 459 HGTGEICLWG-----RHIFMGYLESEAETTKAI-----DEEGWLHSGDLGQLDSLGF 505
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++ SNAQKIQK+ L DFSI GELGPTMK+KR F+ +KY+ ID
Sbjct: 603 VYKAIQEGINDVNQEATSNAQKIQKWVILEKDFSIYGGELGPTMKLKRHFIAQKYKKQID 662
Query: 482 KFY 484
+ Y
Sbjct: 663 QMY 665
>gi|83745141|ref|NP_112186.3| long-chain-fatty-acid--CoA ligase ACSBG2 [Homo sapiens]
gi|296434386|sp|Q5FVE4.2|ACBG2_HUMAN RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG2; AltName:
Full=Acyl-CoA synthetase bubblegum family member 2;
AltName: Full=Bubblegum-related protein; AltName:
Full=PRTD-NY3
gi|119589517|gb|EAW69111.1| acyl-CoA synthetase bubblegum family member 2 [Homo sapiens]
gi|193787508|dbj|BAG52714.1| unnamed protein product [Homo sapiens]
Length = 666
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 146/217 (67%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS E C
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEVCQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 206 SIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 302
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 337 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 505
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQ+I+K+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 603 VYKAIQQGINAVNQEAMNNAQRIEKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 662
Query: 482 KFY 484
Y
Sbjct: 663 HMY 665
>gi|390476614|ref|XP_002759886.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Callithrix
jacchus]
Length = 891
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 148/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 296 ISYSQYYLLARRAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIITGIYTTSS 355
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 356 PEACQYIAHDCRANVIVVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMTNVYTMEEF 415
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 416 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 475
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 476 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 520
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 115/205 (56%), Gaps = 19/205 (9%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + N+ +P+T RL +L+L+KV+
Sbjct: 542 WEKIMERIQEAAAQSGFIRRKMLLWAMSVTLEQNLTCAGSNL-KPFTTRLADYLVLAKVR 600
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 601 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 660
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ G W +
Sbjct: 661 KVVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAIDEEG-----WLH 710
Query: 242 S-DLGAIYAGGF--AAGMYTTNSPE 263
+ D G + A GF G ++PE
Sbjct: 711 TGDAGRLDADGFLYITGRLKVSTPE 735
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 824 VYQAIEEGIQRVNINAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEKYKDIID 883
Query: 482 KFY 484
FY
Sbjct: 884 SFY 886
>gi|449281512|gb|EMC88569.1| Long-chain-fatty-acid--CoA ligase ACSBG1 [Columba livia]
Length = 649
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/226 (46%), Positives = 154/226 (68%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I EY R AK+FLKLGLER+HSV I+GFN+PEWF S +GA++AGG G+YTTN
Sbjct: 59 KITFSEYYCLSRKAAKSFLKLGLERFHSVGILGFNSPEWFISAVGAVFAGGIVTGIYTTN 118
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDK-PGVISWDE 318
SPEAC + S NI VVE+ KQL+KI+++ ++ P+LKA+V Y+ P++ P + + +E
Sbjct: 119 SPEACHYIAYDSKTNIMVVENRKQLDKIMQIWSRLPQLKAVVLYKDSVPERHPNLYTMEE 178
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ELG D +LD ++ + N+CC L+YTSGT G K MLSHDNIT+ +A +
Sbjct: 179 FLELGDDVSDTTLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGD 238
Query: 379 LESAAL---SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ A + S++S+LPLSHIAAQ D+++ + ++FA+ +ALK
Sbjct: 239 MQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALK 284
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ KL Q+ +K+ + ++A S SL+ + + + RL +L+L+K++
Sbjct: 306 WEKIMEKLKDAFAQSGFMKKRMLSWAMSLSLERNLNCSSSSDLKQLWARLADYLVLAKIR 365
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+G C+ GAAP+ TE +FL L+I + E +GMSE G H +S P ++ G
Sbjct: 366 NALGFSSCQKHFCGAAPLHTETLYFFLGLNITLYEAYGMSETTGPHCLSGPYVYRQHSCG 425
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ PG + K+VD D EGNGEIC RTV +L + + + F+ W
Sbjct: 426 KPTPGCKVKLVDEDPEGNGEICFWG-----RTVFMGYLNMEDKTKEA-----FDEDGWLR 475
Query: 242 S-DLGAIYAGGF 252
S DLG + GF
Sbjct: 476 SGDLGKLDKDGF 487
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y+A Q IDR N + + IQK+ LP DFSI GELGPTMK+KR V++KY+ ID
Sbjct: 585 IYQAIQEGIDRVNRNATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLTVLEKYRKEID 644
Query: 482 KFYD 485
FY+
Sbjct: 645 SFYE 648
>gi|426248220|ref|XP_004017862.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Ovis aries]
Length = 707
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 145/225 (64%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+ FN+PEWF+S +GA++AGG G+YTT+S
Sbjct: 116 ISYTQYYLLARKAAKGFLKLGLERAHSVAILAFNSPEWFFSAVGAVFAGGIITGIYTTSS 175
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
PEAC + ANI VV+ KQLEKILK+ P LKA+V Y P P V + +EL
Sbjct: 176 PEACQYIAYDCRANIIVVDTQKQLEKILKIWKHLPHLKAVVIYREAPPTRMPSVYTMEEL 235
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD ++ N+CCTLVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 236 MELGNEVPEEALDIIINAQKPNQCCTLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 295
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 296 QPSEIQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 340
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q + ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 362 WEKIMERIQEVVAQSGFIRRKMLLWAMSVTLEQNLTCPSSDL-KPFTTRLADYLVLAKVR 420
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 421 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 480
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ G W +
Sbjct: 481 KVVPGCRVKLVNEDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAIDTEG-----WLH 530
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 531 TGDTGRLDADGF 542
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A I R N+ + + IQK+ L DFSI GELGPTMK+KR V++KY+ +I+
Sbjct: 640 VYQAIGEGIQRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLAVLEKYKDVIE 699
Query: 482 KFY 484
FY
Sbjct: 700 SFY 702
>gi|348555657|ref|XP_003463640.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like [Cavia
porcellus]
Length = 727
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 144/215 (66%), Gaps = 5/215 (2%)
Query: 212 RTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVT 271
R VAK FLKLGLE+ HSV I+GFNAPEWF+S +G ++AGG G+YTT+SP+AC +
Sbjct: 138 RKVAKGFLKLGLEQAHSVAILGFNAPEWFFSAVGTVFAGGIVTGIYTTSSPDACQYIAHD 197
Query: 272 SDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDELMELGRAAPDE 329
S ANI VV+ KQLEKILK+ P LKA+V Y E P K V + +ELMELG P+E
Sbjct: 198 SRANIIVVDTQKQLEKILKIWKNLPHLKAVVIYREPSPTKTANVYTMEELMELGHQVPEE 257
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS---V 386
+LD ++E N+CC LVYTSGT G K VMLS DNIT+ A Q + A + V
Sbjct: 258 TLDSIIEAQTPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYSSQAGDIHPAEVQQEVV 317
Query: 387 ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 318 VSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 352
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L++V+
Sbjct: 374 WEKIMERIQEVSAQAGFIRRKMLLWAMSVTLEQNLTCPRSDL-KPFTARLADYLVLARVR 432
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE AG H +S+P +++L G
Sbjct: 433 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIHLYAGYGLSETAGPHFMSSPYNYRLYSSG 492
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG K+V+ D EG GEICL RT+ +L + + ++ ++ W +
Sbjct: 493 KLVPGCLVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTREAI-----DSEGWLH 542
Query: 242 S-DLGAIYAGGF 252
+ D G + GF
Sbjct: 543 TGDTGRLDQDGF 554
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 652 VYQAIEEGIQRVNANAAARPYHIQKWAILERDFSISGGELGPTMKLKRFTVLEKYKDIID 711
Query: 482 KFY 484
FY
Sbjct: 712 SFY 714
>gi|260814726|ref|XP_002602065.1| hypothetical protein BRAFLDRAFT_228268 [Branchiostoma floridae]
gi|229287370|gb|EEN58077.1| hypothetical protein BRAFLDRAFT_228268 [Branchiostoma floridae]
Length = 667
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 144/219 (65%), Gaps = 2/219 (0%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y + AK+F+KLGLER+H V IIGFN+PEWF +GAI AGGF G+YTTN+ EA
Sbjct: 69 QQYYDDACRAAKSFIKLGLERFHGVGIIGFNSPEWFIGHVGAILAGGFGVGIYTTNNAEA 128
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDELMEL 322
C + + +AN+ VVE++ QL+KILK+ + P LKA+VQY G ++ P + +W+E M+L
Sbjct: 129 CRYVADSCEANVIVVENNVQLQKILKIWDKLPHLKAVVQYTGALEQKHPNLYTWEEFMQL 188
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G D+ L+ + N+CC L+YTSGT G K MLSHDNIT+ A +Y L
Sbjct: 189 GSDVADKVLEDRISAQVPNQCCILIYTSGTTGNPKGAMLSHDNITWTAHYASEYASLRMG 248
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+S+LPLSH+A Q +DI++ M A + +FA +ALK
Sbjct: 249 KEISVSYLPLSHVAGQMLDIFAPMCNAGSTYFAQPDALK 287
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 94/160 (58%), Gaps = 11/160 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ KLQ + G+K+ +A +AK L M + K S P+ + + ++ ++
Sbjct: 309 WEKIAEKLQAIGRESRGMKKKLATWAKGVGLAGNMNIM-KGQSPPWGWTVANAVVFRTIR 367
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRCR+ SGAAPI+ E +YF+S+++P+ E++GMSE G HT+S P F++ G
Sbjct: 368 KALGLDRCRLQYSGAAPIAMETLQYFMSINVPLYELYGMSESTGPHTMSLPHHFRVGSCG 427
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKL 221
PG T I + D+EG GE+C R V +LK+
Sbjct: 428 SEFPGVTTVIKNADDEGIGEVCFYG-----RHVFMGYLKM 462
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+ +A QA I RAN ++ S AQ IQK+ L DFSIP GELGPT+K++RP V K Y ID
Sbjct: 587 ITEAIQAGITRANKRAASRAQNIQKWLLLQQDFSIPGGELGPTLKLRRPIVNKMYAETID 646
Query: 482 KFY 484
KFY
Sbjct: 647 KFY 649
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENG 65
P ++ +D L T + G ++ + E G ++PP +V + R YP+Q+A+ K+ N
Sbjct: 3 PAGLVPADSLMTWQADGAVQLRMSETGALSRPPETVHAMFTRAVKNYPNQIAMGVKR-ND 61
Query: 66 EWKKVTYK 73
W K TY+
Sbjct: 62 VWVKWTYQ 69
>gi|61098131|ref|NP_001012864.1| long-chain-fatty-acid--CoA ligase ACSBG2 [Gallus gallus]
gi|53130694|emb|CAG31676.1| hypothetical protein RCJMB04_9i11 [Gallus gallus]
Length = 702
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 146/227 (64%), Gaps = 6/227 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ K Y AK+FLKL LER+H VCI+GFN+PEWF +D+GAI+AGG A G+YTTN
Sbjct: 69 KLTYKMYYDKCWKAAKSFLKLVLERFHGVCILGFNSPEWFIADIGAIFAGGLAVGIYTTN 128
Query: 261 SPEACLHCLVTSDANICVVEDDKQ-LEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWD 317
SPEAC + ANI VVE+ Q K L+++ + P +KAI+QY E K +P SW
Sbjct: 129 SPEACHYVAENCSANILVVENHTQACRKSLEIEHKLPHMKAIIQYGEELKEKRPNQYSWR 188
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
E ++LG PD L ++E+ N+CCTL+YTSGT G K VMLSHDN+T+ + +
Sbjct: 189 EFLDLGEDIPDSQLREIIESQKPNQCCTLIYTSGTTGQPKGVMLSHDNLTWTSIAAGRSL 248
Query: 378 KLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L A V+S+LPLSH+AAQ +DI+ +T ++FA +ALK
Sbjct: 249 MLLEATEKQELVVSYLPLSHVAAQMIDIWLPVTFGGQVFFAQPDALK 295
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 200/425 (47%), Gaps = 90/425 (21%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+++ G K R +A++AK LQ + ++ + P +RL R L+ KV+
Sbjct: 317 WEKIEEKMKSVGAKSSTLRRKVASWAKGVGLQTNLKWMNGHSEVPMNFRLARQLVYKKVR 376
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRC +GAAPIS E +FLSL+IP+ E++GMSE +G HTVS P F+L G
Sbjct: 377 KAIGLDRCTKCFTGAAPISRETLEFFLSLNIPVFELYGMSESSGPHTVSIPQAFRLTSCG 436
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G +T I PD +G GEIC R + +L + + ++ + W +
Sbjct: 437 KEMAGCRTLIHKPDADGIGEICFAG-----RHIFMGYLNMEEKTKEAI-----DKDGWLH 486
Query: 242 S-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKA 300
S DLG GF +Y T + + + +ED VK CP
Sbjct: 487 SGDLGKCDKDGF---IYITGRIKELIITAGGENVPPVPIED--------AVKEACP---- 531
Query: 301 IVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVM 360
+IS M +G A ++ L+ I E SG G
Sbjct: 532 ------------IIS--NAMLVGDKAKFLAMLLTLKCIINTE-------SGEPG------ 564
Query: 361 LSHDNITFNAACIIQYF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNA 419
D++T A I+Y KL S A V I+++ +Y+ + A
Sbjct: 565 ---DDLTAEA---IEYCQKLGSKATKVSEI-----ISSKDKAVYAAIQAA---------- 603
Query: 420 LKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
+ N +++SNAQKIQK+ L DFS+ GELGPTMK+KRP V +KY+ +
Sbjct: 604 ----------VSEVNKRAVSNAQKIQKWVVLEKDFSVGGGELGPTMKLKRPVVAQKYKDL 653
Query: 480 IDKFY 484
ID+FY
Sbjct: 654 IDEFY 658
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 15 LYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKVTYKL 74
++TT+ G ++ + E G+ ++ P +V + ++Y D AL K+ NG+W K+TYK+
Sbjct: 16 VWTTQQDGEVKLRMDEEGMGSEAPKTVHEVFQEAVSKYGDYYALASKK-NGQWVKLTYKM 74
>gi|166198360|sp|Q5ZKR7.2|ACBG2_CHICK RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG2; AltName:
Full=Acyl-CoA synthetase bubblegum family member 2
Length = 763
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 146/227 (64%), Gaps = 6/227 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ K Y AK+FLKL LER+H VCI+GFN+PEWF +D+GAI+AGG A G+YTTN
Sbjct: 130 KLTYKMYYDKCWKAAKSFLKLVLERFHGVCILGFNSPEWFIADIGAIFAGGLAVGIYTTN 189
Query: 261 SPEACLHCLVTSDANICVVEDDKQ-LEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWD 317
SPEAC + ANI VVE+ Q K L+++ + P +KAI+QY E K +P SW
Sbjct: 190 SPEACHYVAENCSANILVVENHTQACRKSLEIEHKLPHMKAIIQYGEELKEKRPNQYSWR 249
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
E ++LG PD L ++E+ N+CCTL+YTSGT G K VMLSHDN+T+ + +
Sbjct: 250 EFLDLGEDIPDSQLREIIESQKPNQCCTLIYTSGTTGQPKGVMLSHDNLTWTSIAAGRSL 309
Query: 378 KLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L A V+S+LPLSH+AAQ +DI+ +T ++FA +ALK
Sbjct: 310 MLLEATEKQELVVSYLPLSHVAAQMIDIWLPVTFGGQVFFAQPDALK 356
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 200/425 (47%), Gaps = 90/425 (21%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+++ G K R +A++AK LQ + ++ + P +RL R L+ KV+
Sbjct: 378 WEKIEEKMKSVGAKSSTLRRKVASWAKGVGLQTNLKWMNGHSEVPMNFRLARQLVYKKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRC +GAAPIS E +FLSL+IP+ E++GMSE +G HTVS P F+L G
Sbjct: 438 KAIGLDRCTKCFTGAAPISRETLEFFLSLNIPVFELYGMSESSGPHTVSIPQAFRLTSCG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G +T I PD +G GEIC R + +L + + ++ + W +
Sbjct: 498 KEMAGCRTLIHKPDADGIGEICFAG-----RHIFMGYLNMEEKTKEAI-----DKDGWLH 547
Query: 242 S-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKA 300
S DLG GF +Y T + + + +ED VK CP
Sbjct: 548 SGDLGKCDKDGF---IYITGRIKELIITAGGENVPPVPIED--------AVKEACP---- 592
Query: 301 IVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVM 360
+IS M +G A ++ L+ I E SG G
Sbjct: 593 ------------IIS--NAMLVGDKAKFLAMLLTLKCIINTE-------SGEPG------ 625
Query: 361 LSHDNITFNAACIIQYF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNA 419
D++T A I+Y KL S A V I+++ +Y+ + A +
Sbjct: 626 ---DDLTAEA---IEYCQKLGSKATKVSEI-----ISSKDKAVYAAIQAAVS-------- 666
Query: 420 LKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
N +++SNAQKIQK+ L DFS+ GELGPTMK+KRP V +KY+ +
Sbjct: 667 ------------EVNKRAVSNAQKIQKWVVLEKDFSVGGGELGPTMKLKRPVVAQKYKDL 714
Query: 480 IDKFY 484
ID+FY
Sbjct: 715 IDEFY 719
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 15 LYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKVTYKL 74
++TT+ G ++ + E G+ ++ P +V + ++Y D AL K+ NG+W K+TYK+
Sbjct: 77 VWTTQQDGEVKLRMDEEGMGSEAPKTVHEVFQEAVSKYGDYYALASKK-NGQWVKLTYKM 135
>gi|340370154|ref|XP_003383611.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Amphimedon queenslandica]
Length = 775
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 165/281 (58%), Gaps = 5/281 (1%)
Query: 144 KRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEIC 203
K Y L D P+ + G S A + FK D V R D E NG
Sbjct: 130 KYYSLEPDDPVELLIGKSGVAAVEPTTIGAFFK-DSVKRFPNNHALAYKAADGEWNGISY 188
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+ Y+ VR AK+FLKL LE +HSV I+GFN+ EWF S LGAI AGG G+YTTN P+
Sbjct: 189 TQYYDLCVR-AAKSFLKLELEPFHSVAILGFNSTEWFVSGLGAILAGGVNVGIYTTNKPD 247
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDELME 321
C + + S A+I VVEDDKQL+KIL V+ Q P +KAI+QY G D P V WD+ +E
Sbjct: 248 VCRYIIEDSRADIVVVEDDKQLQKILSVREQLPNVKAIIQYRGTLTGDYPNVYEWDKFIE 307
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII-QYFKLE 380
+G + ++ ++ + + C +++YTSGT G K VMLSHD++T+ + +Y ++
Sbjct: 308 MGSSIDNQVIEDKIVQLNPGHCASIIYTSGTTGYPKGVMLSHDSLTWMCKTLFSRYGFMK 367
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +DIY +M + T +FA +ALK
Sbjct: 368 PGMERVVSYLPLSHIAAQFLDIYMMMYIGGTTYFAQPDALK 408
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
+K I+N+AK L+ ++ N S P+ + + L+ KVK+A+GL ++ ++ AAP
Sbjct: 447 LKSKISNWAKGIGLEGN-TNIQNNGSVPWGWTVAGMLVFKKVKEALGLSETKMFVTTAAP 505
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHT--VSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
I E+ +F+SL++P+ E++GMSE GA T V + +K G+ + G + + +P++
Sbjct: 506 IRREVLDFFMSLNMPLLEIYGMSEGCGAVTANVIEHNSWKSGTSGKPLEGIEVMLHEPND 565
Query: 197 EGNGEICLK 205
+G GE+C +
Sbjct: 566 KGEGELCYR 574
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
D V+ A Q IDRAN K++SNA ++K+ L +DFS GELGPT KV+R +VKK
Sbjct: 704 DNQDTAVFTAIQEGIDRANAKAVSNAATVKKWTLLASDFSESGGELGPTQKVRRFHIVKK 763
Query: 476 YQSIIDKFY 484
Y I+ Y
Sbjct: 764 YAETIEGLY 772
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 16 YTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKVTY 72
Y+ EP + +G++GVAA P ++ + ++P+ AL K +GEW ++Y
Sbjct: 132 YSLEPDDPVELLIGKSGVAAVEPTTIGAFFKDSVKRFPNNHALAYKAADGEWNGISY 188
>gi|122135920|sp|Q2KHW5.1|ACBG1_BOVIN RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG1; AltName:
Full=Acyl-CoA synthetase bubblegum family member 1
gi|86438540|gb|AAI12859.1| ACSBG1 protein [Bos taurus]
Length = 726
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 143/225 (63%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+ FN+PEWF+S +GA++ GG G+YTT+S
Sbjct: 116 ISYTQYYLLARKAAKGFLKLGLERAHSVAILAFNSPEWFFSAVGAVFGGGIITGIYTTSS 175
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP--DKPGVISWDEL 319
PEAC + ANI VV+ KQLEKILK+ P LKA+V Y P P V + +EL
Sbjct: 176 PEACQYIAYDCRANIIVVDTQKQLEKILKIWKHLPHLKAVVIYREAPPMRMPSVYTMEEL 235
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD ++ N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 236 MELGNEVPEEALDVIINAQKPNQCCALVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 295
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 296 QPAEIQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 340
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q + R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 362 WEKIMEQIQEVAAQSGFIWRKMLLWAMSVTLEQNLTCPSSDL-KPFTTRLADYLVLAKVR 420
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 421 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 480
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG Q K+V+ D EG GEICL RT+ +L + + ++ +A W +
Sbjct: 481 KVVPGCQVKLVNEDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DAEGWLH 530
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 531 TGDTGRLDADGF 542
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 388 SFLPLSHIAAQTVDIYSVMTVAATLW--FADKNALKVYKATQAAIDRANLKSISNAQKIQ 445
+F P ++ Q V+ + AT K VY+A + I R N+ + + IQ
Sbjct: 604 TFEPTDNLTEQAVEFCQRVGSKATTVSEVVGKKDEAVYQAIEEGIQRVNMNAAARPYHIQ 663
Query: 446 KFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K+ L DFSI GELGPTMK+KR V++KY+ +ID FY
Sbjct: 664 KWAILEKDFSISGGELGPTMKLKRLAVLEKYKDVIDSFY 702
>gi|166198363|sp|Q4R4P9.2|ACBG1_MACFA RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG1; AltName:
Full=Acyl-CoA synthetase bubblegum family member 1
Length = 724
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILKV Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIMVDTQKQLEKILKVWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPCNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KLVPGCRVKLVNQDTEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 657 VYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEKYKDIID 716
Query: 482 KFY 484
FY
Sbjct: 717 SFY 719
>gi|355692910|gb|EHH27513.1| Long-chain-fatty-acid--CoA ligase ACSBG1 [Macaca mulatta]
Length = 723
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILKV Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIMVDTQKQLEKILKVWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPCNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KLVPGCRVKLVNQDTEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 656 VYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSITGGELGPTMKLKRLTVLEKYKDIID 715
Query: 482 KFY 484
FY
Sbjct: 716 SFY 718
>gi|66792882|ref|NP_001019719.1| long-chain-fatty-acid--CoA ligase ACSBG1 [Bos taurus]
gi|61555420|gb|AAX46711.1| lipidosin [Bos taurus]
gi|296475411|tpg|DAA17526.1| TPA: long-chain-fatty-acid--CoA ligase ACSBG1 [Bos taurus]
Length = 707
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 143/225 (63%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+ FN+PEWF+S +GA++ GG G+YTT+S
Sbjct: 116 ISYTQYYLLARKAAKGFLKLGLERAHSVAILAFNSPEWFFSAVGAVFGGGIITGIYTTSS 175
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP--DKPGVISWDEL 319
PEAC + ANI VV+ KQLEKILK+ P LKA+V Y P P V + +EL
Sbjct: 176 PEACQYIAYDCRANIIVVDTQKQLEKILKIWKHLPHLKAVVIYREAPPMRMPSVYTMEEL 235
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD ++ N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 236 MELGNEVPEEALDVIINAQKPNQCCALVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 295
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 296 QPAEIQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 340
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q + R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 362 WEKIMEQIQEVAAQSGFIWRKMLLWAMSVTLEQNLTCPSSDL-KPFTTRLADYLVLAKVR 420
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 421 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 480
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG Q K+V+ D EG GEICL RT+ +L + + ++ +A W +
Sbjct: 481 KVVPGCQVKLVNEDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DAEGWLH 530
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 531 TGDTGRLDADGF 542
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 388 SFLPLSHIAAQTVDIYSVMTVAATLW--FADKNALKVYKATQAAIDRANLKSISNAQKIQ 445
+F P ++ Q V+ + AT K VY+A + I R N+ + + IQ
Sbjct: 604 TFEPTDNLTEQAVEFCQRVGSKATTVSEVVGKKDEAVYQAIEEGIQRVNMNAAARPYHIQ 663
Query: 446 KFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K+ L DFSI GELGPTMK+KR V++KY+ +ID FY
Sbjct: 664 KWAILEKDFSISGGELGPTMKLKRLAVLEKYKDVIDSFY 702
>gi|355778221|gb|EHH63257.1| Long-chain-fatty-acid--CoA ligase ACSBG1 [Macaca fascicularis]
gi|380810966|gb|AFE77358.1| long-chain-fatty-acid--CoA ligase ACSBG1 isoform 1 [Macaca mulatta]
Length = 723
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILKV Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIMVDTQKQLEKILKVWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPCNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KLVPGCRVKLVNQDTEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 656 VYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEKYKDIID 715
Query: 482 KFY 484
FY
Sbjct: 716 SFY 718
>gi|355755360|gb|EHH59107.1| hypothetical protein EGM_09146 [Macaca fascicularis]
Length = 619
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 145/217 (66%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 37 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 95
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE-GKPDKPGVISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY + + SWD+ MELG
Sbjct: 96 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKENNNLYSWDDFMELGG 155
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ D L++V+++ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 156 SIADTQLEQVIQSQKANQCAVLIYTSGTTGMPKGVMLSHDNITWMAGAVAKDFKLTEKHE 215
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +DI+ +M + A +FA +ALK
Sbjct: 216 MVVSYLPLSHIAAQMMDIWVLMKIGALTYFAQADALK 252
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 108/192 (56%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ +TG+K+ + +A++ + + + P +YR+ + L+ SKVK
Sbjct: 274 WEKIHEKVKKNSAKSTGLKKKVFVWARNIGFKVNSKKMLGKYNTPMSYRVAKTLVFSKVK 333
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
++GLD C +SGA P++ E +FLSLDIPI E++G+SE +G HT+S ++++L G
Sbjct: 334 TSLGLDHCHSFISGAVPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCG 393
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G + + +++G GEICL R + +L+ E ++ + W +
Sbjct: 394 KILTGCKNMLFQQNKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLH 443
Query: 242 S-DLGAIYAGGF 252
S DLG + + GF
Sbjct: 444 SGDLGQLDSLGF 455
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++N QKIQK+ L DFSI GELGPTMK+KR FV +KY+ ID
Sbjct: 553 VYKAIQQGINAVNQEAMNNTQKIQKWVILEKDFSIYGGELGPTMKLKRHFVAQKYKKQID 612
Query: 482 KFY 484
Y
Sbjct: 613 LMY 615
>gi|334326551|ref|XP_001376458.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Monodelphis domestica]
Length = 689
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 151/222 (68%), Gaps = 5/222 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AK+ LKLGLER+H V I+G N EW +D+ +I+AGG A G++ TNS +AC
Sbjct: 103 EYYELCRKAAKSLLKLGLERFHGVGILGHNCLEWLVADIASIFAGGIAVGIFPTNSSQAC 162
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDKPGVISWDELMELG 323
S+ANI +VEDD QL+KILK++ LKAIVQY+ K PG+ +W E +E+G
Sbjct: 163 RFIAENSEANIIMVEDDWQLQKILKIRQYLNHLKAIVQYKDKLREKMPGLYTWQEFLEVG 222
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ---YFKLE 380
+ PDE+LDRV+++ N+CCTL+YT+GT G+ + VM+SHDNIT+ + ++Q Y
Sbjct: 223 KFVPDETLDRVIDSQKPNQCCTLIYTAGTTGSPRAVMISHDNITWTSGAVLQGLSYSLPP 282
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKV 422
+ ++S+LPL I+AQ +++ +T+ A+L+FA+ +A+KV
Sbjct: 283 NNQEILVSYLPLCLISAQMFEVWIPITIGASLFFAEPDAMKV 324
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 74/127 (58%)
Query: 76 TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+T ++ I N+AK + ++N P ++RL + L+ KV++ +G DRC LS
Sbjct: 361 STPFRKGIINWAKKVGYKANTRLEDENGQNPVSFRLAKKLVFDKVRKVLGFDRCIQFLSI 420
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD 195
+ I+ E++ +FLS DI + + +GM+E GAH+ S+ + K G+ + G++T++ D D
Sbjct: 421 GSGITKEMQEFFLSYDIILFQTYGMTETTGAHSASSDESHKWFSCGKPMTGSKTQVRDED 480
Query: 196 EEGNGEI 202
EG GE
Sbjct: 481 REGLGEF 487
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A Q ID N + S + KIQK++ L DFS+ GELGPTMK++R +V ++ II FY
Sbjct: 629 AIQKGIDAVNKELSSESHKIQKWKILEKDFSMKGGELGPTMKLRRTYVTRRLHQIISSFY 688
>gi|167534933|ref|XP_001749141.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772294|gb|EDQ85947.1| predicted protein [Monosiga brevicollis MX1]
Length = 653
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 146/225 (64%), Gaps = 8/225 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y ++ T AKAF+ GL+R+HSV IIGFN+PEWF +DLGA++AGGFA+G+YTTN PE+
Sbjct: 68 RDYHRDIITAAKAFIHFGLDRHHSVGIIGFNSPEWFIADLGAVFAGGFASGIYTTNGPES 127
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-------EGKPDKPGVISWD 317
+ S + VED KQL KI +V+ Q P +K +V + + K K VI WD
Sbjct: 128 LQYVADHSRSQFLFVEDRKQLAKIKEVQDQLPTVKLVVMWGEPVEEKDRKDLKIKVIGWD 187
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
E M GR + + ++ + ECCTL+YTSGT G K VM++HDNIT+ A + +
Sbjct: 188 EFMRGGRDVAEHEVHNRMKVQSPGECCTLIYTSGTTGTPKAVMMTHDNITWTAKALSTHA 247
Query: 378 KLESAALS-VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+L+ +IS+LPLSHIAAQ +D+++ + + A +WFA +ALK
Sbjct: 248 RLDDHRQEHIISYLPLSHIAAQILDMHAPILMGAKVWFAQPDALK 292
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 11/158 (6%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+ Q+TG+K+ IA +AK ++ MA ++ P + L L+ K++
Sbjct: 314 WEKIEEKMRIVGAQSTGLKKKIATWAKRKGMEASMAD-QRGERRPSGFGLANKLVFKKIR 372
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+GLDRC + AAPIS E YFLSL +PI EV+GMSE G TV+ + VG
Sbjct: 373 AKLGLDRCHFLATAAAPISRETLDYFLSLYLPIMEVYGMSENTGPQTVNRSGNHTTGSVG 432
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFL 219
T+ G +TKI +PD G+GEIC++ R V K +L
Sbjct: 433 VTMAGLETKIDNPDANGDGEICMRG-----RHVMKGYL 465
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQK 443
+ V S PL + Q ++I S + +AT A + KV + A AN KS+S AQ
Sbjct: 552 VDVESGEPLDKLTDQVIEILSSIGSSATTVSAAREDPKVIEYIDAKRKEANNKSVSRAQN 611
Query: 444 IQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+QK LP DFS+P GELGPT+K+KRP V +KY+ +ID Y
Sbjct: 612 VQKSYILPVDFSVPGGELGPTLKLKRPVVYEKYKDVIDGLY 652
>gi|67971168|dbj|BAE01926.1| unnamed protein product [Macaca fascicularis]
Length = 612
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/226 (49%), Positives = 147/226 (65%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+
Sbjct: 132 HISYSQYYLLARRAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTS 191
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDE 318
SPEAC + AN+ +V+ KQLEKILKV Q P LKA+V Y E P+K V + +E
Sbjct: 192 SPEACQYIAYDCCANVIMVDTQKQLEKILKVWKQLPHLKAVVIYKEPPPNKMANVYTMEE 251
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q
Sbjct: 252 FMELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGD 311
Query: 379 LESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 312 IRPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPCNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KLVPGCRVKLVNQDTEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
>gi|194206415|ref|XP_001917375.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG1-like [Equus caballus]
Length = 723
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 144/225 (64%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARKAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILK+ P LKA+V Y P K V + +E
Sbjct: 193 PEACQYIAQDCHANVIIVDTQKQLEKILKIWKNLPHLKAVVTYREPPPKKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
ME+G P+E+LD +++ N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MEVGNEVPEEALDTIIDAQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q + R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIWRKMLLWAMSVNLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G RC+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFARCQKNFYGAAPMTVETQNFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG Q K+V+ D EG GEICL RT+ +L + + ++ +A W +
Sbjct: 498 KVVPGCQVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTSEAL-----DADGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 657 VYQAIEEGIQRVNMNAAAQPYHIQKWAILEKDFSISGGELGPTMKLKRLIVLEKYKDIID 716
Query: 482 KFY 484
FY
Sbjct: 717 SFY 719
>gi|403304917|ref|XP_003943025.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Saimiri
boliviensis boliviensis]
Length = 724
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+GFN+P+WF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLSRRAAKGFLKLGLERAHSVAILGFNSPDWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAHDCRANVIVVDTQKQLEKILKIWKQLPHLKAVVIYKESPPNKMSHVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++ N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDAQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 97/160 (60%), Gaps = 11/160 (6%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEAAAQSGFIRRKMLLWAMSVTLEQNLTCAGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ S GAAP++ E + +FL L++ + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKSFYGAAPMTAETQHFFLGLNMRLYAGYGLSETSGPHFMSSPYNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKL 221
+ +PG + K+V+ D EG GEICL RTV +L +
Sbjct: 498 KVVPGCRVKLVNQDAEGIGEICLWG-----RTVFMGYLNM 532
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 657 VYQAIEEGIRRVNMNAAARPYHIQKWVILERDFSISGGELGPTMKLKRLTVLEKYKDIID 716
Query: 482 KFY 484
FY
Sbjct: 717 SFY 719
>gi|297275896|ref|XP_001087092.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Macaca
mulatta]
Length = 619
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 145/217 (66%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 37 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 95
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE-GKPDKPGVISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY + + SWD+ MELG
Sbjct: 96 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKENNNLYSWDDFMELGG 155
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ D L++V+++ N+C L+YTSGT G K VMLSHDNIT+ A + Q FKL
Sbjct: 156 SIADTQLEQVIQSQKANQCAVLIYTSGTTGMPKGVMLSHDNITWMAGAVAQDFKLTEKHE 215
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 216 TVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 252
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ + +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 287 KSTGLKKKVFVWARNIGFKVNSKKMLGKYNTPMSYRVAKTLVFSKVKTSLGLDHCHSFIS 346
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GA P++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 347 GAVPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 406
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + + GF
Sbjct: 407 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDSLGF 455
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++N QKIQK+ L DFSI GELGPTMK+KR FV +KY+ ID
Sbjct: 553 VYKAIQQGINAVNQEAMNNTQKIQKWVILEKDFSIYGGELGPTMKLKRHFVAQKYKKQID 612
Query: 482 KFY 484
Y
Sbjct: 613 LMY 615
>gi|170050090|ref|XP_001859223.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871665|gb|EDS35048.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 645
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 149/227 (65%), Gaps = 8/227 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I KEY+ V +AK F+KLGLE +H+V ++ FN+PEWF S+L AI+AGG AG+YTTNS
Sbjct: 76 ITYKEYQQRVHKMAKVFIKLGLEPHHTVSVLAFNSPEWFVSELAAIHAGGIIAGVYTTNS 135
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG------KPDKPGVIS 315
E+ H L +S +N+ +V+D KQ+EKI +K + P LKA++Q KP+ G
Sbjct: 136 AESVQHVLESSRSNVVIVDDAKQMEKIYAIKDKVPHLKAVIQTTAPYAPYVKPED-GYYR 194
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
W +L E+ +E L IA N CC LVYTSGT G K VMLSHD++T+++ I +
Sbjct: 195 WSDLEEMNTDDVEEEFQNRLANIAINHCCCLVYTSGTVGNPKGVMLSHDSLTWDSYTIGK 254
Query: 376 YF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + ++SFLPLSH+AAQ VDI+ + A T++FADK+A+K
Sbjct: 255 RLDQIQYGSEVLVSFLPLSHVAAQMVDIFLTLQFACTVYFADKDAMK 301
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 91/126 (72%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K+ I+++AKS +LQH++ +E + +YR +R +LSKVK A+GL RC ++ AAP+
Sbjct: 320 KKMISSWAKSVTLQHHLNAMEGKPTNSLSYRFIRNFLLSKVKDALGLSRCLTMVTAAAPM 379
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
E K+YF+SLD+PI E FGMSE +GAH+++APD + +G+++ G +TKI PDE G+
Sbjct: 380 DPETKKYFMSLDLPIMEAFGMSETSGAHSLTAPDSYNFATIGKSLGGCETKIDKPDERGH 439
Query: 200 GEICLK 205
GEIC++
Sbjct: 440 GEICMR 445
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV +A Q IDRAN K+ISNAQKIQKF LP DFS+P GELGPT+KVKR V +KY+ +I
Sbjct: 581 KVLQAIQEGIDRANKKAISNAQKIQKFALLPVDFSVPGGELGPTLKVKRNIVQEKYKDVI 640
Query: 481 DKFY 484
+KFY
Sbjct: 641 EKFY 644
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 8 QILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEW 67
+IL +D TT+P ++ L GVA+ P+SVP L+ RT YPD A+ K W
Sbjct: 14 RILPADSYTTTDPTKPVKLRLASEGVASLDPLSVPDLMNRTVRDYPDHPAMMHKNAQKVW 73
Query: 68 KKVTYK 73
+TYK
Sbjct: 74 TPITYK 79
>gi|326926472|ref|XP_003209424.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like [Meleagris
gallopavo]
Length = 700
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 149/226 (65%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I EY R AK+FLKLGLER+HSV I+GFN+PEWF S +GA++AGG G+YTTN
Sbjct: 110 KITFSEYYCFSRKAAKSFLKLGLERFHSVAILGFNSPEWFISAVGAVFAGGIVTGIYTTN 169
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDKPGVISWDE 318
SPEAC + S NI VVE+ KQL+KI+++ + P LKA+V Y+ P + + +E
Sbjct: 170 SPEACHYIAYDSKTNIMVVENRKQLDKIMQIWNRLPHLKAVVLYKDSVLERHPNLYTMEE 229
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
++LG D +LD ++ + N+CC L+YTSGT G K MLSHDNIT+ +A +
Sbjct: 230 FLKLGDDISDATLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGD 289
Query: 379 LESAAL---SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ A + S++S+LPLSHIAAQ D+++ + ++FA+ +ALK
Sbjct: 290 MQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALK 335
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ KL Q+ VK+ + ++A S SL+ + + + + RL +L+L+K++
Sbjct: 357 WEKIMEKLKDASAQSGFVKKKMLSWAMSVSLERNLNCSSSSDLKQFWTRLADYLVLAKIR 416
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+G C+ GAAP++TE +FL L+I + E +GMSE G H +S P +++ G
Sbjct: 417 SALGFSSCQKHFCGAAPLNTETLYFFLGLNITLYEAYGMSETTGPHCLSGPYNYRQHSCG 476
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EGNGEIC RTV +L + + + F+ W +
Sbjct: 477 KPVPGCRVKLVNEDTEGNGEICFWG-----RTVFMGYLNMEDKTKEA-----FDEDGWLH 526
Query: 242 S-DLGAIYAGGF 252
S DLG + GF
Sbjct: 527 SGDLGKLDKDGF 538
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y+A Q I++ N+ + + IQK+ LP DFSI GELGPTMK+KR V++KY++ +D
Sbjct: 636 IYQAIQEGINKVNMNATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLTVLQKYKNEVD 695
Query: 482 KFYD 485
FY+
Sbjct: 696 SFYE 699
>gi|301775268|ref|XP_002923057.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like
[Ailuropoda melanoleuca]
Length = 705
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 146/225 (64%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLE+ HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 114 ISYSQYYLLARKAAKGFLKLGLEQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 173
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + S ANI V++ KQLEKILK P LKA+V Y E P+K V + +EL
Sbjct: 174 PEACQYIAQDSRANIIVLDTQKQLEKILKTWKNLPHLKAVVTYGETPPEKMANVYTMEEL 233
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
M LG P+E+LD ++ T N CC LVYTSGT G+ K VMLS DNIT+ A Q +
Sbjct: 234 MGLGEELPEETLDAIITTQQPNRCCALVYTSGTTGSPKGVMLSQDNITWTARYGSQAGDI 293
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 294 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 338
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K ++Q + ++R + +A S +L+ + ++ +P+ RL +L+L+KV+
Sbjct: 360 WEKFMERIQEVVAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFAARLAEYLVLAKVR 418
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+GL RC S GAAP++ E +R+FL L++ + +G+SE +G H +S+P +++L G
Sbjct: 419 QALGLGRCGKSFYGAAPMTAETQRFFLGLNMRLYSGYGLSETSGPHFMSSPCNYRLYSSG 478
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG K+V+ D EG GEICL RT+ +L + + ++ +A W +
Sbjct: 479 KLVPGCLAKLVNEDAEGIGEICLWG-----RTIFMGYLNMEDKTREAI-----DADGWLH 528
Query: 242 S-DLGAIYAGGF 252
+ D+G + GF
Sbjct: 529 TGDVGRMDTDGF 540
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N + + IQK+ L DFSI GELGPTMK+KR V+ KY+ IID
Sbjct: 638 VYQAIEQGIQRVNRDAAARPYHIQKWAVLQRDFSISGGELGPTMKLKRSMVLDKYKDIID 697
Query: 482 KFY 484
FY
Sbjct: 698 SFY 700
>gi|410950233|ref|XP_003981815.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Felis catus]
Length = 666
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 148/221 (66%), Gaps = 7/221 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R A+A +KLGL+R+H V I+GFN+ EWF + LGAI AGG G+Y+TNS +AC
Sbjct: 83 YEA-CRKAARALIKLGLQRFHGVGILGFNSVEWFIASLGAILAGGLCVGIYSTNSADACQ 141
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE--GKPDKPGVISWDELMELG 323
+ + + NI +VE+D QL+KIL + + + LKAI+QY+ K + + SW++ MELG
Sbjct: 142 YVITHAKVNILLVENDLQLQKILSIPRGRMETLKAIIQYKLPMKESRDNLYSWNDFMELG 201
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+ PD LD+++E+ N+C ++YTSGT G K VMLSHDNIT+ A + L +AA
Sbjct: 202 HSIPDSQLDQIMESQRPNQCAVIIYTSGTLGNPKGVMLSHDNITWTAGAAAKNCGLSTAA 261
Query: 384 LS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +DI+ M + A+ +FA +ALK
Sbjct: 262 QKQEVVVSYLPLSHIAAQMMDIWVTMKIGASTYFAQPDALK 302
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ +++ TG K + + ++ + + + P +YR+ L+ SKVK
Sbjct: 324 WEKMQERIKETGAKFSSLRKKVFSWGRVIGFKINTKGMLGTHDTPISYRVSEALVFSKVK 383
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC +SGAAP++ + +FLSLDIPI +++GMSE +G HT S+ + +++ G
Sbjct: 384 SALGLDRCHSFISGAAPLNQQTAEFFLSLDIPIGQMYGMSESSGPHTASSRESYRIQSCG 443
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ + G + + +++ GEIC+
Sbjct: 444 KVMDGCKNMLYQMNKDSIGEICI 466
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDI-----YSVMTVAATLWF 414
++SH + A + + I+ PL ++++ ++ V TV+ L
Sbjct: 539 IISHAMLVGEKANFLSILLTLKCKMDGITGEPLDELSSEAINFCRKLGSHVSTVSEILEL 598
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
D VYKA Q ID N ++ISNAQ+IQK+ L DFS+P+GELGPT KV+R FV +
Sbjct: 599 QDP---LVYKAIQEGIDAVNEEAISNAQRIQKWAILEKDFSVPSGELGPTTKVRRHFVAQ 655
Query: 475 KYQSIIDKFY 484
KY+ +I+ FY
Sbjct: 656 KYKRLIESFY 665
>gi|281350258|gb|EFB25842.1| hypothetical protein PANDA_012130 [Ailuropoda melanoleuca]
Length = 625
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/226 (49%), Positives = 146/226 (64%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
I +Y R AK FLKLGLE+ HSV I+GFN+PEWF+S +G ++AGG G+YTT+
Sbjct: 55 HISYSQYYLLARKAAKGFLKLGLEQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTS 114
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDE 318
SPEAC + S ANI V++ KQLEKILK P LKA+V Y E P+K V + +E
Sbjct: 115 SPEACQYIAQDSRANIIVLDTQKQLEKILKTWKNLPHLKAVVTYGETPPEKMANVYTMEE 174
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LM LG P+E+LD ++ T N CC LVYTSGT G+ K VMLS DNIT+ A Q
Sbjct: 175 LMGLGEELPEETLDAIITTQQPNRCCALVYTSGTTGSPKGVMLSQDNITWTARYGSQAGD 234
Query: 379 LESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 235 IQPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 280
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K ++Q + ++R + +A S +L+ + ++ +P+ RL +L+L+KV+
Sbjct: 302 WEKFMERIQEVVAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFAARLAEYLVLAKVR 360
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+GL RC S GAAP++ E +R+FL L++ + +G+SE +G H +S+P +++L G
Sbjct: 361 QALGLGRCGKSFYGAAPMTAETQRFFLGLNMRLYSGYGLSETSGPHFMSSPCNYRLYSSG 420
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG K+V+ D EG GEICL RT+ +L + + ++ +A W +
Sbjct: 421 KLVPGCLAKLVNEDAEGIGEICLWG-----RTIFMGYLNMEDKTREAI-----DADGWLH 470
Query: 242 S-DLGAIYAGGF 252
+ D+G + GF
Sbjct: 471 TGDVGRMDTDGF 482
>gi|410960460|ref|XP_003986807.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Felis catus]
Length = 784
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/226 (47%), Positives = 145/226 (64%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+
Sbjct: 192 HISYSQYYLLARRTAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTS 251
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDE 318
SPEAC + S ANI VV+ KQLEKILK+ P LKA+V Y P + V + DE
Sbjct: 252 SPEACQYVAHDSCANIIVVDTQKQLEKILKIWKNLPHLKAVVTYREAPARKMARVYTMDE 311
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+M LG P+E+LD V+ N+CC L+YTSGT G+ K VMLS DNIT+ A Q
Sbjct: 312 VMGLGDELPEETLDAVISAQQPNQCCVLIYTSGTTGSPKGVMLSQDNITWTARHGSQAGG 371
Query: 379 LESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++A + V+S+LPLSHIA Q D+++ + A + FA+ +AL+
Sbjct: 372 IQAAEVQQEVVVSYLPLSHIAGQIYDLWTGIQWGAHICFAEPDALQ 417
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 67 WKKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEP------YTYRLVRWLILSKV 120
W+K+ ++Q G + L LE+NV+ P + RL +L+L+KV
Sbjct: 439 WEKIMERIQEVGAGS--GFLWRKMLLWAMSVTLEQNVTCPSSDLKSFKARLADYLVLAKV 496
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
+QA+G RCR + GAAP++TE +++FL L+I + +G+SE +G H +S+ +++
Sbjct: 497 RQALGFARCRKNFYGAAPLTTETQQFFLGLNIHLYGGYGLSETSGPHFISSLSNYRPGSS 556
Query: 181 GRTIPGTQTKIVDPDEEGNGEICL 204
G+ +PG K+V+ D EG GEICL
Sbjct: 557 GKVVPGCLMKLVNEDAEGVGEICL 580
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 394 HIAAQTVDIYSVMTVAATLW--FADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLP 451
H+ Q V+ + +AT + VY+A + I R N K+ + IQK+ L
Sbjct: 687 HLTEQAVEFCRRVGSSATTVSEIVGRRDEAVYRAIEEGIQRVNRKAAAQPYHIQKWAILQ 746
Query: 452 ADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
DFS+ GELGPT+K++R V+ KY+ +ID FY
Sbjct: 747 KDFSVAGGELGPTLKLRRRIVLDKYKDVIDSFY 779
>gi|344247645|gb|EGW03749.1| Long-chain-fatty-acid--CoA ligase ACSBG1 [Cricetulus griseus]
Length = 663
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 150/235 (63%), Gaps = 15/235 (6%)
Query: 202 ICLKEYEANVRTVAKAFLKL----------GLERYHSVCIIGFNAPEWFYSDLGAIYAGG 251
I +Y R VAK FLKL GLER HSV I+GFN+PEWF+S +G ++AGG
Sbjct: 62 ISYYQYYLISRKVAKGFLKLTCLSAFDLELGLERAHSVAILGFNSPEWFFSAVGTVFAGG 121
Query: 252 FAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDK 310
G+YTT+SPEAC + AN+ VV+ KQLEKILK+ P LKA+V Y+ P K
Sbjct: 122 IVTGIYTTSSPEACQYIAHDCRANVIVVDTQKQLEKILKIWKDLPHLKAVVIYQDPLPKK 181
Query: 311 -PGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
P V + DELMELG+ P+++LD +++T N+CC LVYTSGT G K VMLS DNIT+
Sbjct: 182 MPNVYTMDELMELGQEMPEKALDTIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWT 241
Query: 370 AACIIQYFKLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A Q ++ A + V+S+LPLSHIAAQ D+++ + A + FAD +ALK
Sbjct: 242 ARYGSQAGDIQPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFADPDALK 296
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 318 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPSDDL-KPFTSRLADYLVLAKVR 376
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E R+FL L+I + +G+SE G H +S+P +++L G
Sbjct: 377 QALGFAKCQKNFYGAAPMTAETLRFFLGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSG 436
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R +PG + K+V+ D +G GEICL RT+ +L + + ++ ++ W +
Sbjct: 437 RVVPGCRVKLVNQDADGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DSEGWLH 486
Query: 242 S-DLGAIYAGGF 252
+ D+G + A GF
Sbjct: 487 TGDMGRLDADGF 498
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A Q I R N + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 596 VYQAIQEGIQRVNANAAARPYHIQKWAILKRDFSISGGELGPTMKLKRLTVLEKYKDIID 655
Query: 482 KFY 484
FY
Sbjct: 656 AFY 658
>gi|355703034|gb|EHH29525.1| hypothetical protein EGK_09980 [Macaca mulatta]
Length = 619
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 144/220 (65%), Gaps = 2/220 (0%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+Y R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS E
Sbjct: 33 FNQYYDACRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAE 92
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE-GKPDKPGVISWDELME 321
AC + + + NI +VE+D+QL+KIL + ++ LKAIVQY + + SWD+ ME
Sbjct: 93 ACQYVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIVQYRLPMKENNNLYSWDDFME 152
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
LG + D L++V+++ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 153 LGGSIADTQLEQVIQSQKANQCAVLIYTSGTTGMPKGVMLSHDNITWMAGAVAKDFKLTE 212
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 213 KHETVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 252
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ + +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 287 KSTGLKKKVFVWARNIGFKVNSKKMLGKYNTPMSYRVAKTLVFSKVKTSLGLDHCHSFIS 346
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GA P++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 347 GAVPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 406
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + + GF
Sbjct: 407 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDSLGF 455
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++N QKIQK+ L DFSI GELGPTMK+KR FV +KY+ ID
Sbjct: 553 VYKAIQQGINAVNQEAMNNTQKIQKWVILEKDFSIYGGELGPTMKLKRHFVAQKYKKQID 612
Query: 482 KFY 484
Y
Sbjct: 613 LMY 615
>gi|332844441|ref|XP_510525.3| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Pan
troglodytes]
gi|397485435|ref|XP_003813851.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Pan paniscus]
Length = 724
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGL++ HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIVVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP+ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMMAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KLVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDTGRLDADGF 559
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 414 FADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVV 473
+K VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V+
Sbjct: 649 IVEKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVL 708
Query: 474 KKYQSIIDKFY 484
+KY+ IID FY
Sbjct: 709 EKYKGIIDSFY 719
>gi|145354557|ref|XP_001421548.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581786|gb|ABO99841.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 623
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 151/235 (64%), Gaps = 17/235 (7%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+KEY + AK+F+ LGLERY SVCI+GFN+PEW ++ GAI+AGGFAAG+YTTN P
Sbjct: 29 VKEYYDDCVKTAKSFIHLGLERYESVCILGFNSPEWLMANNGAIFAGGFAAGIYTTNEPA 88
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPG--------V 313
AC + + S A + VV+ KQL+KIL+++++ PKLKAIV Y + D G V
Sbjct: 89 ACEYIIENSSARVVVVDGQKQLDKILEIRSRLPKLKAIVMYREDSFSDPAGAKDASLAKV 148
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC- 372
+W + ++LG A D++L+ + CCTL+YTSGT G K VM+SHDN T+ A+
Sbjct: 149 YTWKDFLKLGDAVSDDTLEARMSAQKPGNCCTLIYTSGTTGNPKGVMISHDNCTWTASSN 208
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTV------AATLWFADKNALK 421
I+ + S L V+S+LPLSHIAAQ VDI+S + A ++FA +ALK
Sbjct: 209 ILHNPTITSGPLRVVSYLPLSHIAAQIVDIHSPLMCIVDFDKTAAVYFARPDALK 263
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 67 WKKVTYKLQT-----TGVKRWIANYAKSTSLQ-HYMAYLEKNVSEPYTYRLVRWLILSKV 120
W+K LQ TG+K I+ + K H + + V P+ + K
Sbjct: 285 WEKFAEGLQAKGKEITGLKAKISAFMKGKCAGVHAASQVGATVGHPFMGGFAMKFMKKKA 344
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
A+GLD+ RV L+GAAPI YF ++ I I EV+GMSE G V D FK
Sbjct: 345 HAAIGLDQARVCLTGAAPIMKHTLDYFGTIGIHILEVYGMSENTGPQNVCKSDYFKAGSC 404
Query: 181 GRTIPGTQTK---IVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAP 237
G IPG + K + D++G GEIC + R V +L + S+ +
Sbjct: 405 GVPIPGVEIKLDHVKGRDKDGEGEICFRG-----RHVMMGYLNNLAKTQESI-----DED 454
Query: 238 EWFYS-DLGAI 247
W +S D+GAI
Sbjct: 455 AWLHSGDVGAI 465
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ I + N ++SNAQ+IQKF+ L DFS+P GEL T K+KR V +KY ++I+ Y
Sbjct: 566 EEGIAKYNKTAVSNAQRIQKFKILDTDFSVPGGELTGTQKLKRNVVTEKYAAVINSMY 623
>gi|118785488|ref|XP_314697.3| AGAP008596-PA [Anopheles gambiae str. PEST]
gi|116127761|gb|EAA10184.3| AGAP008596-PA [Anopheles gambiae str. PEST]
Length = 690
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 145/228 (63%), Gaps = 10/228 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +EY V +AK F+KLGLE +H+V ++ FN+PEWF S+L AI+AGG G+YTTNS
Sbjct: 79 VTYREYRERVHHMAKVFIKLGLEPHHTVAVLAFNSPEWFVSELSAIHAGGIITGVYTTNS 138
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ-------YEGKPDKPGVI 314
E+ H L +S A I VV+D KQ+EKI ++ P LK ++Q Y + D G
Sbjct: 139 AESVQHVLESSRAQIVVVDDAKQMEKICSIRQNLPHLKTVIQTMPPYAPYVKRDD--GFY 196
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
W EL E+ +E +R L IA N+CC LVYTSGT G K VMLSHDN T+++ I
Sbjct: 197 RWSELEEMNVDDVEEEFNRRLANIAINQCCCLVYTSGTVGNPKGVMLSHDNFTWDSYAIG 256
Query: 375 QYF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ ++ A ++SFLPLSH+AAQ VDI+ + A T++FADK+A+K
Sbjct: 257 KRLHQIRYAEEVLVSFLPLSHVAAQMVDIFLTLQFACTVYFADKDAMK 304
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 91/131 (69%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
Q+ K+ +A +AKS +LQH++ +E + + YRLV+ ILSKVK A+G RC +
Sbjct: 339 QSGAAKKLVAGWAKSVTLQHHLDAMEGKPTNSWQYRLVKNYILSKVKDALGFSRCLTLAT 398
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
AAP+ E K+YF+SLD+PI E FGMSE +GAH+++APD + D +G+ + G +TKI P
Sbjct: 399 AAAPMDRETKKYFMSLDLPIMEAFGMSETSGAHSLTAPDSYNFDTIGKPLGGCETKIDKP 458
Query: 195 DEEGNGEICLK 205
DE G+GEIC++
Sbjct: 459 DERGHGEICMR 469
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 49/63 (77%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V KA Q IDRAN K+ISNAQKIQKF L +DFS+P GELGPT+K+KR V +K + II+
Sbjct: 627 VLKALQEGIDRANQKAISNAQKIQKFALLKSDFSVPGGELGPTLKIKRNVVAEKNKDIIE 686
Query: 482 KFY 484
KFY
Sbjct: 687 KFY 689
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 8 QILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEW 67
+IL +D +T+P ++ + + G+A+ P+SVP L+ RT +PD A+ + +W
Sbjct: 17 RILPADSYTSTDPAVPVKLRIAKEGLASLDPLSVPDLMNRTVRDHPDHPAMVFRNAQKQW 76
Query: 68 KKVTYK 73
+ VTY+
Sbjct: 77 QTVTYR 82
>gi|118095605|ref|XP_413747.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Gallus gallus]
Length = 750
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 149/226 (65%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I EY R AK+FLKLGLER+HSV I+GFN+PEWF S +GA++AGG G+YTTN
Sbjct: 160 KITFSEYYCLSRKAAKSFLKLGLERFHSVAILGFNSPEWFISAVGAVFAGGIVTGIYTTN 219
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDKPGVISWDE 318
SPEAC + S NI VVE+ KQL+KI+++ + P LKA+V Y+ P + + +E
Sbjct: 220 SPEACHYIAYDSKTNIMVVENRKQLDKIMQIWNRLPHLKAVVLYKDSILERHPNLYTMEE 279
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
++LG D +LD ++ + N+CC L+YTSGT G K MLSHDNIT+ +A +
Sbjct: 280 FLKLGDDISDVTLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGD 339
Query: 379 LESAAL---SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ A + S++S+LPLSHIAAQ D+++ + ++FA+ +ALK
Sbjct: 340 MQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALK 385
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ KL Q+ VK+ + ++A S SL+ + + + + RL +L+L+K++
Sbjct: 407 WEKIMEKLKDASAQSGFVKKKMLSWAMSVSLERNLNCSSSSDLKQFWTRLADYLVLAKIR 466
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+G C+ GAAP++TE +FL L+I + E +GMSE G H +S P +++ G
Sbjct: 467 SALGFSSCQKHFCGAAPLNTETLYFFLGLNITLYEAYGMSETTGPHCLSGPYNYRQHSCG 526
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ PG + K+V+ D EGNGEIC RTV +L + + + F+ W +
Sbjct: 527 KPAPGCRVKLVNEDTEGNGEICFWG-----RTVFMGYLNMEDKTKEA-----FDEDGWLH 576
Query: 242 S-DLGAIYAGGF 252
S DLG + GF
Sbjct: 577 SGDLGKLDKDGF 588
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y+A Q I++ N+ + + IQK+ LP DFSI GELGPTMK+KR V++KY++ +D
Sbjct: 686 IYQAIQEGINKVNMNATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLTVLQKYKNEVD 745
Query: 482 KFYD 485
FY+
Sbjct: 746 SFYE 749
>gi|20521111|dbj|BAA31606.2| KIAA0631 protein [Homo sapiens]
Length = 729
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGL++ HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 138 ISYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 197
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 198 PEACQYIAYDCCANVIMVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 257
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 258 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 317
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 318 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 362
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 384 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 442
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP+ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 443 QALGFAKCQKNFYGAAPMMAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 502
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 503 KLVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 552
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 553 TGDAGRLDADGF 564
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
+K VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++K
Sbjct: 656 EKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEK 715
Query: 476 YQSIIDKFY 484
Y+ IID FY
Sbjct: 716 YKGIIDSFY 724
>gi|193786156|dbj|BAG51439.1| unnamed protein product [Homo sapiens]
Length = 724
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGL++ HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIMVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 108/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GA P+ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAVPMMAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KLVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
+K VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++K
Sbjct: 651 EKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEK 710
Query: 476 YQSIIDKFY 484
Y+ IID FY
Sbjct: 711 YKGIIDSFY 719
>gi|189069442|dbj|BAG37108.1| unnamed protein product [Homo sapiens]
Length = 724
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGL++ HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIMVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP+ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMMAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KLVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
+K VY+A + I R N+ +++ IQK+ L DFSI GELGPTMK+KR V++K
Sbjct: 651 EKKDEAVYQAIEEGIRRVNMNAVARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEK 710
Query: 476 YQSIIDKFY 484
Y+ IID FY
Sbjct: 711 YKGIIDSFY 719
>gi|14424532|gb|AAH09289.1| Acyl-CoA synthetase bubblegum family member 1 [Homo sapiens]
gi|119619586|gb|EAW99180.1| acyl-CoA synthetase bubblegum family member 1 [Homo sapiens]
gi|123999837|gb|ABM87427.1| acyl-CoA synthetase bubblegum family member 1 [synthetic construct]
gi|157929204|gb|ABW03887.1| acyl-CoA synthetase bubblegum family member 1 [synthetic construct]
gi|168267452|dbj|BAG09782.1| acyl-CoA synthetase bubblegum family member 1 [synthetic construct]
Length = 724
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGL++ HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIMVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP+ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMMAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KLVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
+K VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++K
Sbjct: 651 EKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEK 710
Query: 476 YQSIIDKFY 484
Y+ IID FY
Sbjct: 711 YKGIIDSFY 719
>gi|27477105|ref|NP_055977.3| long-chain-fatty-acid--CoA ligase ACSBG1 isoform 1 [Homo sapiens]
gi|296434385|sp|Q96GR2.2|ACBG1_HUMAN RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG1; AltName:
Full=Acyl-CoA synthetase bubblegum family member 1;
Short=hBG1; Short=hsBG; Short=hsBGM; AltName:
Full=Lipidosin
gi|9957538|gb|AAG09404.1|AF179481_1 very long-chain acyl-CoA synthetase [Homo sapiens]
Length = 724
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGL++ HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIMVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP+ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMMAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KLVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
+K VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++K
Sbjct: 651 EKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEK 710
Query: 476 YQSIIDKFY 484
Y+ IID FY
Sbjct: 711 YKGIIDSFY 719
>gi|221042800|dbj|BAH13077.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/226 (48%), Positives = 147/226 (65%), Gaps = 5/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
I +Y R AK FLKLGL++ HSV I+GFN+PEWF+S +G ++AGG G+YTT+
Sbjct: 25 HISYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTS 84
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDE 318
SPEAC + AN+ +V+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 85 SPEACQYIAYDCCANVIMVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEE 144
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q
Sbjct: 145 FMELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGD 204
Query: 379 LESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 205 IRPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 250
>gi|322788668|gb|EFZ14269.1| hypothetical protein SINV_14758 [Solenopsis invicta]
Length = 303
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 139/220 (63%), Gaps = 35/220 (15%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
L EYE++VRTVAKAFLKLGLERYHSVCI+GFN+PEWF +DL AIYAGGFA G+YTTNSPE
Sbjct: 106 LTEYESSVRTVAKAFLKLGLERYHSVCILGFNSPEWFIADLAAIYAGGFATGIYTTNSPE 165
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
AC +C + A C L + Q W+ L+++G
Sbjct: 166 ACQYCAE-------------------HINATC--LLFLTQ------------WNNLLDIG 192
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LES 381
+ ++ L VL+TI NECCTLVYTSGT G K VMLSHDN+ + ++ L+
Sbjct: 193 KKESEDKLQSVLKTIGVNECCTLVYTSGTVGNPKAVMLSHDNVLHDLRMLLLALGNVLKE 252
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ VIS+LPLSH+AAQ +DI + + +A T++FAD ALK
Sbjct: 253 KSEIVISYLPLSHVAAQIIDIIANIMMATTVYFADPGALK 292
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 6 PNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQE-N 64
P+Q+L +D+ T++ +GR RI L G+ + P S+PG+ +TA +YPD +AL + + N
Sbjct: 18 PDQVLSADVDITSDANGRVRIKLDSNGLNSIMPQSIPGIFTKTAKRYPDHIALVSRPDAN 77
Query: 65 GEWKKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNV 103
G K+ TY Q+ K ++ AK S + ++ E +V
Sbjct: 78 G--KRTTYTFQSVSAK-FLNTSAKHRSFRLHLTEYESSV 113
>gi|403295980|ref|XP_003938899.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 1
[Saimiri boliviensis boliviensis]
gi|403295982|ref|XP_003938900.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 649
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 215 AKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDA 274
AK+ +KLGLER+H V I+GFN+ EWF + LG I AGG G+Y TNS EAC H + +
Sbjct: 77 AKSLIKLGLERFHGVGILGFNSVEWFITALGTILAGGLCVGIYATNSAEACQHAITDAKV 136
Query: 275 NICVVEDDKQLEKILKV-KAQCPKLKAIVQYE-GKPDKPGVISWDELMELGRAAPDESLD 332
NI +VE+D+QL+KIL + ++ LKAI+QY + + SWD+ MELG + PD L+
Sbjct: 137 NILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPVKNSNNLYSWDDFMELGGSIPDTQLE 196
Query: 333 RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPL 392
+V+++ N+C L+YTSGT G K VMLSHDNIT+ A + + KL V+S+LPL
Sbjct: 197 QVIQSQKANQCAVLIYTSGTTGMPKGVMLSHDNITWTAGAVAKDLKLTEKHEMVVSYLPL 256
Query: 393 SHIAAQTVDIYSVMTVAATLWFADKNALK 421
SHIAAQ +DI+ + + A +FA +ALK
Sbjct: 257 SHIAAQMMDIWVPIKIGALTYFAQPDALK 285
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 105/192 (54%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQT-----TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ +++ TG+ + + +A++ + + + P YR+ + L+ SKVK
Sbjct: 307 WEKMQVEVKKNSAKFTGLSKKVFVWARNIGFKINSKKMLGKHNTPMNYRMAKTLVFSKVK 366
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
++GLD C + GAAP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G
Sbjct: 367 MSLGLDHCHSFICGAAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCG 426
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G + + +++G GEICL R + +L+ E ++ + W +
Sbjct: 427 KILTGCKNMLFQQNKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DEEGWLH 476
Query: 242 S-DLGAIYAGGF 252
S DLG + + GF
Sbjct: 477 SGDLGQLDSLGF 488
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 391 PLSHIAAQTVDI-YSVMTVAATL--WFADKNALKVYKATQAAIDRANLKSISNAQKIQKF 447
PL + + +D + ++A+T+ K++L VYKA Q I+ N ++ SNAQKIQK+
Sbjct: 553 PLDKLTLEAIDFCRGLGSLASTVTDIVKQKDSL-VYKAIQEGINDVNQEATSNAQKIQKW 611
Query: 448 EFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
L DFSI GELGPTMK+KR F+ +KY+ ID Y
Sbjct: 612 VILEKDFSIYGGELGPTMKLKRHFIAQKYKKQIDGMY 648
>gi|426379933|ref|XP_004056641.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Gorilla
gorilla gorilla]
Length = 735
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 147/225 (65%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGL++ H V I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLKQAHGVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + A++ VV+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCASVIVVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 312
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 313 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 357
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 379 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 437
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 438 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 497
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 498 KVVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 547
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 548 TGDAGRLDADGF 559
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 391 PLSHIAAQTVDIYSVMTVAATLW--FADKNALKVYKATQAAIDRANLKSISNAQKIQKFE 448
P ++ Q V+ + AT +K VY+A + I R N+ + + IQK+
Sbjct: 624 PTDNLTEQAVEFCQRVGSRATTVSEIVEKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWA 683
Query: 449 FLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
L DFSI GELGPTMK+KR V++KY+ IID FY
Sbjct: 684 ILERDFSISGGELGPTMKLKRLTVLEKYKGIIDSFY 719
>gi|73951717|ref|XP_536214.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Canis lupus
familiaris]
Length = 821
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 145/225 (64%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLE+ HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 230 ISYSQYYLLARRTAKGFLKLGLEQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 289
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
EAC + S ANI VV+ KQLEKILKV P LKA+V Y P K V + +EL
Sbjct: 290 SEACQYIAHDSRANIIVVDTQKQLEKILKVWKNLPHLKAVVIYGEAPPKKMANVYTMEEL 349
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG +E+LD ++ T N+CC L+YTSGT G+ K VMLS DNIT+ A Q +
Sbjct: 350 MELGDELLEETLDAIINTQQPNQCCVLIYTSGTTGSPKGVMLSQDNITWTARYGSQAGDI 409
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 410 QPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 454
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 476 WEKIMERIQEVTAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTARLADYLVLAKVR 534
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ S GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 535 QALGFAKCQKSFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 594
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG K+V+ D EG GEICL RT+ +L + + ++ +A W +
Sbjct: 595 KVVPGCLAKVVNEDSEGVGEICLWG-----RTIFMGYLNMEDKTREAI-----DAEGWLH 644
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 645 TGDTGRLDADGF 656
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N + + IQK+ L DFSI GELGPTMK+KR V+ KY+ IID
Sbjct: 754 VYQAIEQGIQRVNKNAAARPYHIQKWAILQKDFSISGGELGPTMKLKRLTVLDKYKDIID 813
Query: 482 KFY 484
FY
Sbjct: 814 SFY 816
>gi|344284069|ref|XP_003413793.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like [Loxodonta
africana]
Length = 724
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 143/225 (63%), Gaps = 5/225 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 134 ISYVQYYLLSRKAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 193
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC AN+ VV+ KQLEKILK+ P LKA+V Y E P K V + +E
Sbjct: 194 PEACQFIAHDCRANVIVVDTQKQLEKILKIWKHLPHLKAVVIYQEPLPKKMANVYTMEEF 253
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD ++ N+CC LVYTSGT G+ K VMLS DNIT+ A Q +
Sbjct: 254 MELGNEVPEEALDTIISAQQPNQCCVLVYTSGTTGSPKGVMLSQDNITWTARYGSQAGDI 313
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 314 QPAETQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 358
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 113/192 (58%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++ ++R + +A S +L+ ++ + ++ +P+ RL +L+L+KV+
Sbjct: 380 WEKIMEQIQEVAAQSSFIRRKMLLWAMSVTLEQNLSSPDSDL-KPFMTRLADYLVLAKVR 438
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ S GAAP++ E +R+FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 439 QALGFAKCQKSFYGAAPMTAETQRFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 498
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG K+V+ D EG GEICL RT+ +L + + ++ +A W +
Sbjct: 499 KVVPGCLVKLVNEDAEGTGEICLWG-----RTIFMGYLNMEDKTCEAI-----DADGWLH 548
Query: 242 S-DLGAIYAGGF 252
+ D G + GF
Sbjct: 549 TGDAGRLDDDGF 560
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R NL + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 657 VYQAIEEGIQRVNLNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLIVLEKYKDIID 716
Query: 482 KFY 484
FY
Sbjct: 717 SFY 719
>gi|157111121|ref|XP_001651400.1| AMP dependent ligase [Aedes aegypti]
gi|108878546|gb|EAT42771.1| AAEL005740-PA [Aedes aegypti]
Length = 617
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 146/228 (64%), Gaps = 10/228 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +EY V +AK F+KLGLE +H+V ++ FN+PEWF S+L AI+AGG G+YTTNS
Sbjct: 77 VTYREYRDRVHKMAKVFIKLGLEPHHTVSVLAFNSPEWFVSELAAIHAGGIITGVYTTNS 136
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ-------YEGKPDKPGVI 314
E+ H L +S NI VV+D KQ+EKI +K+Q P LKA++Q Y + D G
Sbjct: 137 AESVKHVLESSRTNIVVVDDAKQMEKIYSIKSQLPHLKAVIQTTAPYAPYVKRED--GYY 194
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
W EL E+ +E L I N+CC LVYTSGT G K VM+SHD++T+++ I
Sbjct: 195 RWSELEEMNTDDVEEEFKTRLANIVINKCCCLVYTSGTVGNPKGVMMSHDSLTWDSYSIG 254
Query: 375 QYF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +++ ++SFLPLSHIAAQ VDI+ + A T++FADK+A+K
Sbjct: 255 KRLDQIQYGKEVLVSFLPLSHIAAQMVDIFLSLQFACTVYFADKDAMK 302
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 90/131 (68%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
Q+ K+ I+++AKS +LQH++ +E + + YR VR +LSKVK A+GL RC ++
Sbjct: 337 QSGTAKKMISSWAKSVTLQHHLNAMEGKPTNSWQYRFVRNFLLSKVKDALGLSRCMTMVT 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
AAP+ E K+YF+SLD+PI E FGMSE GAH+++ D + +G+++ G +TKI P
Sbjct: 397 AAAPMDPETKKYFMSLDMPIMEAFGMSETCGAHSLTTADSYNFATIGKSLGGCETKIDKP 456
Query: 195 DEEGNGEICLK 205
DE G+GEIC++
Sbjct: 457 DERGHGEICMR 467
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 2 KEERPNQILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQK 61
K ER ++ + L TT+P+G ++ + + G+A+ PISVP L+ RT YPD A+ K
Sbjct: 9 KFERFGRVEQVENLTTTDPNGAVKVRVAKEGIASLDPISVPDLVNRTVRDYPDLPAMVYK 68
Query: 62 QENGEWKKVTYK 73
W VTY+
Sbjct: 69 NAQKIWTTVTYR 80
>gi|335282445|ref|XP_003123156.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Sus scrofa]
Length = 673
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/222 (47%), Positives = 144/222 (64%), Gaps = 8/222 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R KA +KLGLE +HSV I+GFN+ EW + LGAI AGGF G+Y TNS +AC
Sbjct: 89 YEA-CRKAGKAMMKLGLEPFHSVGILGFNSVEWLIAALGAILAGGFCVGIYATNSTDACQ 147
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE---GKPDKPGVISWDELMEL 322
+ + + NI +VE+D QL+KIL + K++ LKAI+QY+ + + SWD+ MEL
Sbjct: 148 YVITHAKVNILIVENDMQLQKILAIPKSRMETLKAIIQYKVPVKESKSNNLYSWDDFMEL 207
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
GR+ PD LD+++ N+C ++YTSGT G K VMLSHDNIT+ A + + L A
Sbjct: 208 GRSIPDAQLDQIIRNQKANQCAVIIYTSGTIGNPKGVMLSHDNITWMAGAAAREYNLAYA 267
Query: 383 ALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +D++ M V A ++FA NALK
Sbjct: 268 CERQEVVVSYLPLSHIAAQMMDVWIPMKVGAFIYFAQPNALK 309
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ ++ +++ + ++A++T + + P +YR+ + L+ SKVK
Sbjct: 331 WEKMHEKIKEAIDKSSSLRKKVFSWARTTGFKVNTKRMMGGHDTPMSYRMAKALVFSKVK 390
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
++GLD C + +SGAAP++ E +FLSLDI I E +GM+E +G HT+S +++K+ G
Sbjct: 391 SSVGLDHCHIFISGAAPLNQETAEFFLSLDIRIGEAYGMTESSGPHTLSNHENYKILSSG 450
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ IPG + + ++G GEICL
Sbjct: 451 KVIPGCKNMLYQQTKDGVGEICL 473
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q I+ N ++ISNAQKIQK+ L DFSI GELGPT K+KR F+++KY+ ID
Sbjct: 610 VYTAIQKGINAVNQQAISNAQKIQKWAILEKDFSISGGELGPTTKIKRHFIIQKYKKQID 669
Query: 482 KFY 484
FY
Sbjct: 670 NFY 672
>gi|402903903|ref|XP_003914794.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 1
[Papio anubis]
Length = 638
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 144/217 (66%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS +AC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAKACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE-GKPDKPGVISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY + + SWD+ MELG
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKENNNLYSWDDFMELGG 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ D L++V+++ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 206 SIADTQLEQVIQSQKANQCAVLIYTSGTTGMPKGVMLSHDNITWMAGAVAKDFKLTEKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKTGALTYFAQADALK 302
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 101/179 (56%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ + +A++ + + + P +YR+ + L+ SKVK +GLD C +S
Sbjct: 337 KSTGLKKKVFVWARNIGFKVNSKKMLGKYNTPMSYRVAKTLVFSKVKTYLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GA P++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GAVPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDSLGF 505
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++N QKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 575 VYKAIQQGINAVNQEAMNNTQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 634
Query: 482 KFY 484
Y
Sbjct: 635 LMY 637
>gi|402903905|ref|XP_003914795.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 2
[Papio anubis]
Length = 666
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 144/217 (66%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS +AC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAKACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE-GKPDKPGVISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY + + SWD+ MELG
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKENNNLYSWDDFMELGG 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ D L++V+++ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 206 SIADTQLEQVIQSQKANQCAVLIYTSGTTGMPKGVMLSHDNITWMAGAVAKDFKLTEKHE 265
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + A +FA +ALK
Sbjct: 266 TVVSYLPLSHIAAQMMDIWVPIKTGALTYFAQADALK 302
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 101/179 (56%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ + +A++ + + + P +YR+ + L+ SKVK +GLD C +S
Sbjct: 337 KSTGLKKKVFVWARNIGFKVNSKKMLGKYNTPMSYRVAKTLVFSKVKTYLGLDHCHSFIS 396
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GA P++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 397 GAVPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 456
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + + GF
Sbjct: 457 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDSLGF 505
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++N QKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 603 VYKAIQQGINAVNQEAMNNTQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 662
Query: 482 KFY 484
Y
Sbjct: 663 LMY 665
>gi|402903907|ref|XP_003914796.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 isoform 3
[Papio anubis]
Length = 616
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 144/217 (66%), Gaps = 3/217 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS +AC
Sbjct: 37 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAKACQ 95
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE-GKPDKPGVISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY + + SWD+ MELG
Sbjct: 96 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKENNNLYSWDDFMELGG 155
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ D L++V+++ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 156 SIADTQLEQVIQSQKANQCAVLIYTSGTTGMPKGVMLSHDNITWMAGAVAKDFKLTEKHE 215
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + A +FA +ALK
Sbjct: 216 TVVSYLPLSHIAAQMMDIWVPIKTGALTYFAQADALK 252
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 101/179 (56%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ + +A++ + + + P +YR+ + L+ SKVK +GLD C +S
Sbjct: 287 KSTGLKKKVFVWARNIGFKVNSKKMLGKYNTPMSYRVAKTLVFSKVKTYLGLDHCHSFIS 346
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GA P++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 347 GAVPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 406
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + + GF
Sbjct: 407 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDSLGF 455
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++N QKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 553 VYKAIQQGINAVNQEAMNNTQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 612
Query: 482 KFY 484
Y
Sbjct: 613 LMY 615
>gi|326428131|gb|EGD73701.1| AMP dependent ligase [Salpingoeca sp. ATCC 50818]
Length = 644
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 140/222 (63%), Gaps = 5/222 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+++ +V+ +AF+KLGL+ +H+V IIGFN+PEWF +DLGAI+AGGFA G+YTTN PEA
Sbjct: 62 RDFYEDVKMAGRAFIKLGLDAHHAVGIIGFNSPEWFIADLGAIFAGGFATGIYTTNGPEA 121
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PD---KPGVISWDELM 320
+ + S I V ED KQL+KIL+V LKAIV Y PD ++ WDE M
Sbjct: 122 IEYVVNHSKTQIIVAEDKKQLDKILQVHQNFEHLKAIVLYNDTVPDVECTVPILDWDEFM 181
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
G PD L + +CC L+YTSGT G K VM++HDN+T+ +A + +
Sbjct: 182 RHGADVPDFELGHRMSVQKPGQCCMLIYTSGTTGNPKGVMITHDNVTWTSATLAASLPNM 241
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLSHIAAQ +D+++ M + AT+WFA ALK
Sbjct: 242 TFGKEHIVSYLPLSHIAAQILDMHAPMILGATVWFAQPTALK 283
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+ +TTG+K+ I +AK L A +++ P + + + L+ SKV+
Sbjct: 305 WEKIEEKMRAVGSETTGLKKKIGTWAKRKGLDGAYA-IQQGRPVPSGWGVAKKLVFSKVR 363
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRC+ + AAPIS + YFLS++IPI EV+GMSE G +++ P + VG
Sbjct: 364 KALGLDRCKFFATAAAPISKDTLEYFLSINIPIMEVYGMSENTGPQSLNIPGKHRTGSVG 423
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ GT+ KI +PD++GNGEIC + R + K ++ + S+ +A W +
Sbjct: 424 LPLAGTELKIHEPDQDGNGEICFRG-----RHICKGYMYNEEKTRESI-----DAEGWLH 473
Query: 242 S-DLGAIYAGGF 252
S D+G + G+
Sbjct: 474 SGDIGRVDEDGY 485
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 59/94 (62%)
Query: 391 PLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFL 450
PL + QT++I A + V K QA ID AN ++S AQK+QKF+ L
Sbjct: 550 PLDELTPQTIEILEAQGSKAKTVTEAMDDEHVLKYIQAGIDEANKHAVSRAQKVQKFKIL 609
Query: 451 PADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
P DFS+P GELGPT+K++RP VVK+Y+ +ID FY
Sbjct: 610 PRDFSVPGGELGPTLKLRRPIVVKQYEELIDSFY 643
>gi|308812292|ref|XP_003083453.1| MGC53673 protein (ISS) [Ostreococcus tauri]
gi|116055334|emb|CAL58002.1| MGC53673 protein (ISS) [Ostreococcus tauri]
Length = 651
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 148/235 (62%), Gaps = 17/235 (7%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+KEY + R AK+F+ LGLER+ SVCI+GFN+PEW S+ GAI AGGFAAG+YTTN P
Sbjct: 57 VKEYYNSCRDAAKSFIHLGLERFESVCILGFNSPEWLMSNNGAILAGGFAAGIYTTNEPP 116
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--------EGKPDKP--GV 313
AC + S A + VV+ KQL+K++ ++ + PKLKAIV Y EG+ D V
Sbjct: 117 ACEFIIQDSSARVVVVDGQKQLDKLIAIRKRLPKLKAIVMYRDETFSDPEGEKDSSLAKV 176
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA-AC 372
+W + M+LG + D+ L+ + CCTL+YTSGT G K VM+SHDN + A A
Sbjct: 177 YTWKDFMKLGASVSDKVLEARMNAQKPGHCCTLIYTSGTTGNPKGVMISHDNAVWTAKAN 236
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTV------AATLWFADKNALK 421
I+ + + L V+S+LPLSHIAAQ VDI+S + +A++ FA +ALK
Sbjct: 237 ILHNPTITAGPLRVVSYLPLSHIAAQIVDIHSPLICMVDFERSASVHFARPDALK 291
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKST-SLQHYMAYLEKNVSEPYTYRLVRWLILSKV 120
W+K +Q TG+K+ I+ + K S+++ + + P+ + + K
Sbjct: 313 WEKFAEAMQAAGKNVTGLKKTISTFMKGKCSVEYEASQIGATTGHPFLGGFAKSFMRKKA 372
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
+GLD+ RV L+GAAPI YF S+ I I EV+GMSE G V PD FK
Sbjct: 373 HSRIGLDQARVCLTGAAPIMKHTLDYFGSIGIHILEVYGMSENTGPQNVCKPDYFKAGTC 432
Query: 181 GRTIPGTQTK---IVDPDEEGNGEICLK 205
G TIPGT+ K + D+EG GEIC +
Sbjct: 433 GLTIPGTEVKLDHVKGRDKEGEGEICFR 460
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q ID+ N ++SNAQ+IQKF+ L DFS+P GEL T K+KR V +KY S+I+ Y
Sbjct: 594 QEGIDKYNKTAVSNAQRIQKFKILDTDFSVPGGELTGTQKLKRNVVTEKYASVIESMY 651
>gi|291415558|ref|XP_002724019.1| PREDICTED: bubblegum-related acyl-CoA synthetase 2 [Oryctolagus
cuniculus]
Length = 680
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 144/226 (63%), Gaps = 6/226 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +Y R A+A +KLGLER+H V I+GFN+ +W + LGAI AGG G+Y TNS
Sbjct: 91 LNFNQYYEACRRAARALIKLGLERFHGVGILGFNSTQWSVAALGAILAGGLCVGIYATNS 150
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE--GKPDKPGVISWDE 318
EAC + + + NI +VE+D+QL KIL + +A+ LKAIVQY+ + + SWD+
Sbjct: 151 AEACQYVIADAKVNILLVENDQQLRKILSIPEARMETLKAIVQYKLPMRERNTNLYSWDD 210
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
MELG + PD LDR++E+ N+C ++YTSGT G+ K VMLSHDNIT+ A + +
Sbjct: 211 FMELGNSVPDMQLDRLIESQRANQCAIIIYTSGTTGSPKGVMLSHDNITWLAGTLARDLG 270
Query: 379 LESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L S V+S+LPLSHIAAQ +DI+ + + +FA +ALK
Sbjct: 271 LTSTLGKQEVVVSYLPLSHIAAQMMDIWLPIKIGGLTYFAQSDALK 316
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+++G+K+ + ++AK+ L+ + +YR+ + L+ SKV+ ++GLDRC +S
Sbjct: 351 KSSGLKKKVFSWAKNVGLRVNTRKMMGKHDNMVSYRMAKALVFSKVRSSLGLDRCHYFIS 410
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GAA ++ E +FLSLDIPI E++G+SE AG HTVS +++L G+ + G + +
Sbjct: 411 GAAALAPETSEFFLSLDIPIGEMYGLSESAGPHTVSTQHNYRLLSCGKVMSGCKNMVSQQ 470
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+ G GE+CL R V +L + S + W +S DLG + GF
Sbjct: 471 NNNGVGEVCLWG-----RHVFMGYLDM-----ESATAEVIDEEGWLHSGDLGRVDNQGF 519
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V+ A Q +D N ++IS+AQKI+++ L DFSIP GELGPT K+KR F+ +KY+ I+
Sbjct: 617 VHTAIQQGMDAVNQEAISDAQKIRRWMILEKDFSIPGGELGPTTKIKRHFITQKYKQQIE 676
Query: 482 KFY 484
Y
Sbjct: 677 SLY 679
>gi|395501106|ref|XP_003754939.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1 [Sarcophilus
harrisii]
Length = 706
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 143/226 (63%), Gaps = 5/226 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+GFN+ EWF S +GA++AGG G+YTT+S
Sbjct: 115 ITYSQYYLLSRKAAKGFLKLGLERVHSVAILGFNSAEWFISAVGAVFAGGILTGIYTTSS 174
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILK+ P LKA+V Y P + P V + ++
Sbjct: 175 PEACQYIAHDCKANVILVDSQKQLEKILKIWKNLPYLKAVVMYRETPAERIPNVYTMEDF 234
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+E+G PD +LD +L + N+CC LVYTSGT G K VMLS DNIT+ A + +
Sbjct: 235 LEIGNEVPDVTLDVILNSQKPNQCCVLVYTSGTTGNPKGVMLSQDNITWTAKFGSRAGDI 294
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKV 422
+ A + V+S+LPLSH+AAQ D+++ + A + FA+ +ALK
Sbjct: 295 QPAEIQQEVVVSYLPLSHVAAQMYDLWTGIQWGANICFAEPDALKT 340
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 94/161 (58%), Gaps = 17/161 (10%)
Query: 99 LEKNVS------EPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDI 152
+E+N+S +P+T RL +L+L+K+++A+G C+ + GAAP++TE +FL L+I
Sbjct: 391 MERNLSCPSSDLKPFTMRLADYLVLAKIRKALGFANCQKNFYGAAPMTTETLHFFLGLNI 450
Query: 153 PICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVR 212
+ +G+SE +G H +S +++L G+ +PG + K+V+ D EGNGEICL R
Sbjct: 451 RLYAGYGLSESSGPHFMSNSYNYRLYSSGKVLPGCKAKLVNIDAEGNGEICLWG-----R 505
Query: 213 TVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
TV +L + + ++ G W ++ DLG + GF
Sbjct: 506 TVFMGYLNMEEKTRETIDEDG-----WLHTGDLGKLDNDGF 541
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y+A + I R N K+ + +IQK+ L DFSI GE GPTMK+KR V++KY+ I+
Sbjct: 639 IYQAIEEGIRRVNEKAAAQPYRIQKWALLERDFSISGGEFGPTMKLKRLAVLEKYKEEIE 698
Query: 482 KFY 484
FY
Sbjct: 699 SFY 701
>gi|320162860|gb|EFW39759.1| long-chain-fatty-acid-CoA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 650
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 147/219 (67%), Gaps = 5/219 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y A+V AK+ + LGL+ YH+V I+GFN+PEWF +DL AI AGGFAAG+YTTNSPEAC
Sbjct: 70 YYADVCAAAKSMIVLGLQPYHAVGILGFNSPEWFIADLAAIIAGGFAAGIYTTNSPEACH 129
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD----KPGVISWDELMEL 322
+ S ANI VVEDD+QL+KIL V+ + P LKAIVQY G K V W + M+L
Sbjct: 130 YVAEHSRANIIVVEDDRQLQKILAVRDRLPNLKAIVQYTGTVSSDLKKKNVYEWADFMQL 189
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
GR PD + ++ + N+C TL+YTSGT G K VM+SHDN+T+ A I K+
Sbjct: 190 GRDIPDFEVQWRIQALKPNQCATLIYTSGTTGNPKAVMISHDNMTWTAQTCINILKVVPE 249
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+IS+LPLSH+AAQ +DI++ + T+WFA +ALK
Sbjct: 250 D-ELISYLPLSHVAAQMIDIHAPLATGLTVWFAQPDALK 287
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 100/144 (69%), Gaps = 6/144 (4%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+ QTTG+K+ IA +AKS L+ ++ L+ P+ + + L+ SK++
Sbjct: 309 WEKMQEKMLAIGKQTTGLKKTIATWAKSIGLEGNLS-LQNGRDVPWGWSIANGLVFSKIR 367
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GLDRCR+ + AAPI+ E YFLSL+IP+ E++GMSEC+G TVS P+ ++ G
Sbjct: 368 EALGLDRCRIQATAAAPITRETLEYFLSLNIPVYEIYGMSECSGPQTVSLPETYRTGSCG 427
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
++PGT+ +I++PD++GNGEIC +
Sbjct: 428 PSVPGTELRIMNPDKDGNGEICFR 451
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q IDRAN K++S AQ+IQK+E + DFSIP GELGPT+K+KRP VV KY +I++FY
Sbjct: 589 QRGIDRANHKAVSAAQRIQKWELIAGDFSIPGGELGPTLKLKRPQVVSKYAEVIERFY 646
>gi|351697801|gb|EHB00720.1| Long-chain-fatty-acid--CoA ligase ACSBG1 [Heterocephalus glaber]
Length = 776
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 137/207 (66%), Gaps = 5/207 (2%)
Query: 220 KLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVV 279
KLGLE+ HSV I+GFNAPEWF+S +G ++AGG G+YTT+SPEAC + ANI VV
Sbjct: 179 KLGLEQAHSVAILGFNAPEWFFSAVGTVFAGGIVTGIYTTSSPEACQYIAHDCRANIIVV 238
Query: 280 EDDKQLEKILKVKAQCPKLKAIVQYEGKP--DKPGVISWDELMELGRAAPDESLDRVLET 337
+ KQLEKILK+ P LKA+V Y+ P V + +ELMELG P+E+LD ++E
Sbjct: 239 DTQKQLEKILKIWKNLPYLKAVVMYQEHPPMKMANVYTMEELMELGHQVPEETLDSIIEA 298
Query: 338 IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL---SVISFLPLSH 394
N+CC LVYTSGT G K VMLS DNIT+ A Q ++ A + V+S+LPLSH
Sbjct: 299 QTPNQCCALVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDIQPAEVLQEVVVSYLPLSH 358
Query: 395 IAAQTVDIYSVMTVAATLWFADKNALK 421
IAAQ D+++ + A + FA+ +ALK
Sbjct: 359 IAAQIYDLWTGIQWGAQVCFAEPDALK 385
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 90/143 (62%), Gaps = 6/143 (4%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L++V+
Sbjct: 407 WEKIMERIQEVAAQAGFIRRKMLLWAMSVTLEQNLTCPSSDL-KPFTARLADYLVLARVR 465
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E +R+FL L+I + +G+SE G H +S P +++L G
Sbjct: 466 QALGFAKCQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSETTGPHFMSNPYNYRLYSSG 525
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ +PG K+V+ DEEG GEICL
Sbjct: 526 KLVPGCLVKLVNQDEEGIGEICL 548
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 709 VYQAIEEGIRRVNANAAAQPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEKYKDIID 768
Query: 482 KFY 484
FY
Sbjct: 769 SFY 771
>gi|334313707|ref|XP_001376891.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like
[Monodelphis domestica]
Length = 706
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 143/226 (63%), Gaps = 5/226 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLE HSV I+G+N+PEWF S +G ++AGG G+YTT+S
Sbjct: 115 ITYSQYYLLARKAAKGFLKLGLEHVHSVAILGYNSPEWFISAVGTVFAGGILTGIYTTSS 174
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDEL 319
PEAC + ANI +V+ KQLEKILK+ P LKA+V ++ P + P V + +E
Sbjct: 175 PEACQYIAHDCKANIILVDTQKQLEKILKIWKNLPYLKAVVMFQETPAEKIPNVYTMEEF 234
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+E+G P+ +LD ++ + N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 235 LEIGNEIPEATLDGIINSQKPNQCCVLVYTSGTTGNPKGVMLSQDNITWTAKFGSQAGDI 294
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKV 422
+ A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 295 QPAEIQQEVVVSYLPLSHIAAQMYDLWTGIQWGANICFAEPDALKT 340
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 17/161 (10%)
Query: 99 LEKNVS------EPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDI 152
+E+N+S +P+T RL +L+L+K+++A+G C + GAAP++TE +FL L+I
Sbjct: 391 MERNLSCPSSDLKPFTMRLADYLVLAKIRKALGFANCLKNFYGAAPMTTETLHFFLGLNI 450
Query: 153 PICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVR 212
+ +G+SE +G H +S +++L G+ +PG + K+V+ D EGNGEICL R
Sbjct: 451 RLYAGYGLSESSGPHFMSNSFNYRLYSSGKVLPGCKAKLVNVDAEGNGEICLWG-----R 505
Query: 213 TVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
TV +L + + ++ G W ++ D+G + GF
Sbjct: 506 TVFMGYLNMEEKTREAIDEDG-----WLHTGDMGKLDNDGF 541
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+Y+A + I R N K+ + ++QK+ L DFSI GE GPTMK+KR V++KY+ I+
Sbjct: 639 IYQAIEEGIQRVNEKAAAQPYRVQKWTLLERDFSISGGEFGPTMKLKRLAVLEKYKEEIE 698
Query: 482 KFY 484
FY
Sbjct: 699 SFY 701
>gi|431922356|gb|ELK19447.1| Long-chain-fatty-acid--CoA ligase ACSBG2, partial [Pteropus alecto]
Length = 1321
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 156/260 (60%), Gaps = 10/260 (3%)
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHS 228
V+ P+ F+ + V R GT +V E + +Y R A+A +KLGLER+H
Sbjct: 44 VTIPELFR-ESVNRF--GTYPALVSKSTENWEILNFNQYYEACRKAARALIKLGLERFHG 100
Query: 229 VCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKI 288
V I+GFN+ EW + LG I AGG + G+Y TNS EAC + + + NI +VE+D QL+KI
Sbjct: 101 VGILGFNSAEWLIASLGTILAGGLSVGIYATNSAEACQYVITRAKVNILLVENDLQLQKI 160
Query: 289 LKV-KAQCPKLKAIVQYE---GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECC 344
L + ++ LKAI+QY+ +K + SWD+ MELG + P+ LD+++ N+C
Sbjct: 161 LSIPQSSIETLKAIIQYKLPMNVHNKDNLYSWDDFMELGNSIPNSQLDQIIAGQKANQCA 220
Query: 345 TLVYTSGTEGASKPVMLSHDNITFNAACIIQ---YFKLESAALSVISFLPLSHIAAQTVD 401
L+YTSGT G K VMLSHDNIT+ A + + + ++S+LPLSHIAAQ +D
Sbjct: 221 VLMYTSGTTGNPKGVMLSHDNITWTAGAVSRDCGFSHAREKQEVLVSYLPLSHIAAQMLD 280
Query: 402 IYSVMTVAATLWFADKNALK 421
++ M + A ++FA +ALK
Sbjct: 281 VWVHMKIGAVMYFAQPDALK 300
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 126/215 (58%), Gaps = 15/215 (6%)
Query: 212 RTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVT 271
R AKAFL+LGL+R+H V I+G N+ EW + +GAI AG SP+ C +
Sbjct: 711 RRAAKAFLQLGLKRFHGVGIMGLNSEEWVIASIGAIMAG----------SPKVCQVIAES 760
Query: 272 SDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP--GVISWDELMELGRAAPDE 329
S+ N+ VV+DD+QL+KI++++ LKA+VQY+ K + SW +EL + D+
Sbjct: 761 SEMNVFVVDDDRQLQKIMQIQGCLKHLKAMVQYKEKIQTQLQNLYSWRAFLELADSISDD 820
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ---YFKLESAALSV 386
+L+RV+++ N+CC L+Y G K +MLSHDNIT+ Q Y +
Sbjct: 821 ALNRVIDSQKPNQCCALIYRPVATGPPKAIMLSHDNITWTTWATAQSLSYKHPPEGQEVL 880
Query: 387 ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+S+LPLS++ AQ D++ ++VA L+FA AL+
Sbjct: 881 VSYLPLSYMGAQIFDMWVTISVAGALYFAQPGALR 915
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 104/192 (54%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ +++ G +K+ + ++A++ L+ + P TY+L + L+ SKV+
Sbjct: 322 WEKMQERIKENGTRDSQLKKKVFSWARAIGLKINKKKMLGIYETPVTYQLAKALVFSKVR 381
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GL+RCR +SGA + + +FLSLDIP+ E++G+SE +G HT + +++++ G
Sbjct: 382 SALGLERCRFLMSGAGFLGPDTSEFFLSLDIPVGEMYGLSESSGPHTAHSWENYRILSCG 441
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G + + + +G GE+CL R V + LER + + W +
Sbjct: 442 KILSGCKNMLYQQNSDGTGEVCLWG-----RHVFMGY----LEREQDTMEV-IDEQGWLH 491
Query: 242 S-DLGAIYAGGF 252
S DLG + + GF
Sbjct: 492 SGDLGHMDSQGF 503
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%)
Query: 71 TYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCR 130
T +L T +R + +A L+ + + +P +RL R L + ++ +GL RC
Sbjct: 989 TSQLACTPFRRTVNKWAMGLGLETNRRRMLGQIYQPLCFRLARKLAFNHARRFLGLHRCL 1048
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK 190
+ + + YFLSLD+P+ E++G+SE +G HT+S DF+L G+ +PGT T+
Sbjct: 1049 QLFNMGLGLPQATRDYFLSLDMPVFELYGLSESSGIHTLSRQQDFRLLSCGKPLPGTYTR 1108
Query: 191 IVDPD 195
+ D
Sbjct: 1109 VQKQD 1113
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 433 ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AN ++ S++ +I K+ L DFS+ GELG T K+KR V K YQ+ I+ FY
Sbjct: 1265 ANAEAASDSARIAKWAILETDFSVAGGELGATTKLKRAIVAKIYQAEIESFY 1316
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDI-YSVMTVAATLW-FADK 417
+LSH + + A + + I+ PL + ++ + SV + A T+ +
Sbjct: 537 ILSHAMLVGDKAKFLSILLTLKCEMDSITGEPLDKLNSEAIKFCQSVGSQATTVTEIVGQ 596
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGEL 461
+ L+VY A Q ID AN ++ S A ++QK+ L DFSI GEL
Sbjct: 597 HDLRVYAAIQRGIDAANQEANSGAHRVQKWVILEKDFSIWGGEL 640
>gi|345787299|ref|XP_533936.3| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG2 [Canis lupus familiaris]
Length = 676
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 146/220 (66%), Gaps = 7/220 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R A+A +KLGL+R+H V I+GFN+ EW + LGAI AGG G+Y TNS +AC
Sbjct: 93 YEA-CRKAARALIKLGLQRFHGVGILGFNSVEWLIASLGAILAGGLCVGIYATNSADACQ 151
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE--GKPDKPGVISWDELMELG 323
+ + + N+ +VE+D QL+KIL + +++ LKAI+QY+ K + SW++ MELG
Sbjct: 152 YVITNAKVNVLLVENDLQLQKILSIPQSRMETLKAIIQYKLPVKESNNNLYSWNDFMELG 211
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+ PD LD+++E+ N+C ++YTSGT G K VMLSHDNIT+ A + + L +AA
Sbjct: 212 NSIPDSQLDQIIESQRANQCAVIIYTSGTLGNPKGVMLSHDNITWTAGAVAKNCSLSNAA 271
Query: 384 LS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNAL 420
V+S+LPLSH+AAQ +D++ M + A ++FA +AL
Sbjct: 272 EKQEVVVSYLPLSHVAAQMMDVWIPMKIGAFIYFAQPDAL 311
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 105/192 (54%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ +G K + + ++ + L+ + +YR+ + L+ SKV+
Sbjct: 334 WEKMQEKIKESGAKCSSLRKKVFSWGRIIGLKVNTKRMFGVHDTTMSYRVAKALVFSKVR 393
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLD+C++ +SGAAP++ E +FLSLDIPI E++GMSE G HT S+ +++K+ G
Sbjct: 394 NALGLDQCQIPISGAAPLNPETSEFFLSLDIPIGEMYGMSESTGPHTTSSRNNYKIHSCG 453
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G + + ++G GEIC+ R V +L++ + + W +
Sbjct: 454 KIMSGCKNMLYQQSKDGTGEICIWG-----RHVFMGYLEM-----EDATMEAIDEEGWLH 503
Query: 242 S-DLGAIYAGGF 252
+ DLG + + GF
Sbjct: 504 TGDLGRVDSHGF 515
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q ID N ++ISNAQ+IQK+ L DFS+ GELGPT K++R FV +KY+ I+
Sbjct: 613 VYKAIQQGIDAVNQEAISNAQRIQKWVILEKDFSVHNGELGPTTKIRRHFVTQKYRKQIE 672
Query: 482 KFY 484
FY
Sbjct: 673 SFY 675
>gi|301784783|ref|XP_002927814.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Ailuropoda melanoleuca]
Length = 666
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 144/224 (64%), Gaps = 6/224 (2%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
K+Y R A+A +KLGL+R+ V I+GFN+ EWF + LGAI AGG G+Y TNS E
Sbjct: 79 FKQYYEACRKAARALIKLGLQRFQGVGILGFNSVEWFIASLGAILAGGLCVGIYATNSAE 138
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE--GKPDKPGVISWDELM 320
AC + + + NI +VE+D QL+KIL + +++ LK I+QY+ + V SW++ M
Sbjct: 139 ACQYVITHAKVNILLVENDLQLKKILSIPQSRIENLKVIIQYKLPVEESTENVYSWNDFM 198
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
ELG + PD LD+++E+ N+C ++YTSGT G K MLSHDNIT+ A+ + + L
Sbjct: 199 ELGNSIPDSWLDQIMESQRANQCAMIIYTSGTSGNPKGAMLSHDNITWTASTVAKNSGLS 258
Query: 381 SAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
AA V+S+LPLSHIAAQ +D++ M + A +FA +ALK
Sbjct: 259 CAAEKQEVVVSYLPLSHIAAQMMDVWVPMKIGAFTYFAQPDALK 302
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++ G+K + + ++ + L+ + P +YR+ + L+ SKV+
Sbjct: 324 WEKMQETIKANGIKFSSLRKKVFSWGRVIGLKVNTKKMLGIQDTPMSYRMAKALVFSKVR 383
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+GLD C +SGAAP+ E +FLSLD+PI E++GM+EC G HTVS +++K+ G
Sbjct: 384 SDLGLDYCHFFISGAAPLDQETSEFFLSLDMPISEIYGMTECTGPHTVSNQNNYKIHSCG 443
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G + + ++G GEIC A R V +L++ + + W +
Sbjct: 444 KNMAGCKNMLYQESKDGVGEIC-----AWGRHVFMGYLEM-----EDTTLEAIDEEGWLH 493
Query: 242 S-DLGAIYAGGF 252
+ DLG + + GF
Sbjct: 494 TGDLGRVDSQGF 505
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A Q ID N ++ISNAQ+I K+ L DFS+ GELGPT KV+R F+ +KY+ I+
Sbjct: 603 VYRAIQQGIDAVNQEAISNAQRIHKWVILEKDFSVSNGELGPTTKVRRHFITQKYKKQIE 662
Query: 482 KFY 484
KFY
Sbjct: 663 KFY 665
>gi|281339761|gb|EFB15345.1| hypothetical protein PANDA_017635 [Ailuropoda melanoleuca]
Length = 626
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 144/224 (64%), Gaps = 6/224 (2%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
K+Y R A+A +KLGL+R+ V I+GFN+ EWF + LGAI AGG G+Y TNS E
Sbjct: 60 FKQYYEACRKAARALIKLGLQRFQGVGILGFNSVEWFIASLGAILAGGLCVGIYATNSAE 119
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYE--GKPDKPGVISWDELM 320
AC + + + NI +VE+D QL+KIL + +++ LK I+QY+ + V SW++ M
Sbjct: 120 ACQYVITHAKVNILLVENDLQLKKILSIPQSRIENLKVIIQYKLPVEESTENVYSWNDFM 179
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
ELG + PD LD+++E+ N+C ++YTSGT G K MLSHDNIT+ A+ + + L
Sbjct: 180 ELGNSIPDSWLDQIMESQRANQCAMIIYTSGTSGNPKGAMLSHDNITWTASTVAKNSGLS 239
Query: 381 SAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
AA V+S+LPLSHIAAQ +D++ M + A +FA +ALK
Sbjct: 240 CAAEKQEVVVSYLPLSHIAAQMMDVWVPMKIGAFTYFAQPDALK 283
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 16/192 (8%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++ G+K + + ++ + L+ + P +YR+ + L+ SKV+
Sbjct: 305 WEKMQETIKANGIKFSSLRKKVFSWGRVIGLKVNTKKMLGIQDTPMSYRMAKALVFSKVR 364
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+GLD C +SGAAP+ E +FLSLD+PI E++GM+EC G HTVS +++K+ G
Sbjct: 365 SDLGLDYCHFFISGAAPLDQETSEFFLSLDMPISEIYGMTECTGPHTVSNQNNYKIHSCG 424
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G + + ++G GEIC A R V +L++ + + W +
Sbjct: 425 KNMAGCKNMLYQESKDGVGEIC-----AWGRHVFMGYLEM-----EDTTLEAIDEEGWLH 474
Query: 242 S-DLGAIYAGGF 252
+ DLG + + GF
Sbjct: 475 TGDLGRVDSQGF 486
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELG 462
VY+A Q ID N ++ISNAQ+I K+ L DFS+ GELG
Sbjct: 584 VYRAIQQGIDAVNQEAISNAQRIHKWVILEKDFSVSNGELG 624
>gi|395512906|ref|XP_003760674.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Sarcophilus harrisii]
Length = 652
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 144/225 (64%), Gaps = 5/225 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AK+FLKLGLER+HSV I+G+N EW +D+ +I+AGG G++ NS +AC
Sbjct: 67 EYYELCRKAAKSFLKLGLERFHSVGILGYNCIEWLIADIASIFAGGICVGIFPNNSSQAC 126
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDELMELG 323
+S+ANI +VEDD QL+KILK++ LKAIVQY+ K K P +W+E + LG
Sbjct: 127 RFIADSSEANILMVEDDWQLQKILKIQDHLRHLKAIVQYKNKLTKKLPNTYTWEEFLTLG 186
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ---YFKLE 380
DE LD ++++ N+CC LVYT+GT GA K VM+SHDNIT+ ++Q Y
Sbjct: 187 GTVSDEMLDSIIDSQKPNQCCMLVYTTGTTGAQKAVMISHDNITWTTMAVLQNLPYTYPP 246
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKA 425
++S+LPLS I AQ +I+ + + A ++FA+ +A+ + ++
Sbjct: 247 DNQEMLVSYLPLSLITAQIFEIWIPIAIGAAIFFAEPDAMTIRES 291
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 83/141 (58%), Gaps = 6/141 (4%)
Query: 67 WKKVTYKLQT-----TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+++ KL + T K+ + +AK L+ ++ E + P +R+ + LI KV+
Sbjct: 311 WEEIQQKLYSEQMLATSFKKSMIVWAKKVGLRTNLSR-ENDAHAPVGFRVAKKLIYDKVR 369
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+++G DRC LS A +S E++ +FLS DI + + +G++EC G H+VS+ DFKL G
Sbjct: 370 RSLGFDRCLQFLSSGAGLSKEIQDFFLSYDIIVLQTYGLTECTGTHSVSSEKDFKLYSSG 429
Query: 182 RTIPGTQTKIVDPDEEGNGEI 202
+ I G ++ I PD++G G+
Sbjct: 430 KAIMGAKSMIRRPDQDGMGDF 450
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +D+ N K+ ++ +I +++ L DFSI GELGPT+K++RP V + YQ++I FY
Sbjct: 594 QKGVDKINQKTNFDSHRILRWKILEKDFSITGGELGPTLKLRRPHVTRMYQTLISSFY 651
>gi|426230675|ref|XP_004009390.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Ovis aries]
Length = 667
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 148/222 (66%), Gaps = 8/222 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R +A+A LKLGLE +HSV I+GFN+ EW + LGAI+AGGF G+Y TN +AC
Sbjct: 83 YEA-CRKIARAMLKLGLEPFHSVGILGFNSTEWVLAALGAIFAGGFCVGIYATNFADACE 141
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYEGKPDKP---GVISWDELMEL 322
+ + + NI +VE++ QL+KIL + + + LKAIVQY+ D + SWD+ +EL
Sbjct: 142 YVITHAKVNILLVENNAQLQKILSIPSNKMETLKAIVQYKPPVDDSKCENLYSWDDFLEL 201
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G + PD LD+++++ N+C ++YTSGT G K VMLSHDNIT+ A + + L A
Sbjct: 202 GSSIPDAQLDQIIKSQKVNQCAVIIYTSGTTGQPKGVMLSHDNITWTAGSVARDCNLAYA 261
Query: 383 ALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ V+S+LPLSHIAAQ +D++ + V A ++FA+ +ALK
Sbjct: 262 SEKQEVVVSYLPLSHIAAQMMDVWVPIKVGAFIYFAEPDALK 303
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 90/143 (62%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ ++ +++ + +A++ L+ + + P +YR+ + L+ +K+K
Sbjct: 325 WEKMHEKIKEAVGKSSSLRKKVFLWARNIGLKVNLKRMLGEHDPPMSYRMAKALVFTKIK 384
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
++GLD CR+ +SGAAP++ E +FLSLDIPI +V+GMSE +G H++S ++K G
Sbjct: 385 NSLGLDHCRIFISGAAPLNQETSEFFLSLDIPIGDVYGMSESSGPHSISTLANYKFLSSG 444
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ + G + + P ++G GE+CL
Sbjct: 445 KVVTGCKNMLYQPSKDGVGEVCL 467
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q I N K+ISNAQKIQK+ L DFSI GELGPT K+KR F+++KY+ I
Sbjct: 604 VYAAIQKGISAVNQKAISNAQKIQKWVILEKDFSISGGELGPTTKIKRHFILQKYRRQIY 663
Query: 482 KFY 484
Y
Sbjct: 664 SIY 666
>gi|344306090|ref|XP_003421722.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Loxodonta
africana]
Length = 881
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 144/223 (64%), Gaps = 6/223 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+Y R AKA LKLGL+R+++V I+GFN+ EWF + +GAI AGG G+Y TNSPEA
Sbjct: 295 NQYYKACRKAAKALLKLGLKRFNAVGILGFNSAEWFIAAIGAILAGGLCVGIYATNSPEA 354
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEG--KPDKPGVISWDELME 321
C + + + NI +VE+D+QL+KIL + + + L AI+QY+ K + WD+ ME
Sbjct: 355 CQYVIDHAKVNILLVENDQQLQKILSIPQNKVETLNAIIQYKQPVKESSNNLYFWDDFME 414
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
LG + PD LD+++E+ N+C ++YTSGT G K VMLSHDNIT+ A + + L
Sbjct: 415 LGNSIPDAQLDQIIESQKANQCAVVIYTSGTTGHPKGVMLSHDNITWTAGAVPRDCSLSL 474
Query: 382 AALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A V+S+LPLSHIAAQ VD++ + + A +FA +AL+
Sbjct: 475 APEKQEVVVSYLPLSHIAAQMVDLWIPIKIGAITYFAQPDALR 517
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 90/143 (62%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ T +KR + +A++T L+ + P +YR+ + L+ +KV+
Sbjct: 539 WEKMQEKIKENTTKATALKRKVFTWARNTGLRVNTKRMLGGHDMPMSYRMAKTLVFNKVR 598
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC + +SGAAP++ E +FLSLDIPI E++GMSE +G HTV+ ++++ G
Sbjct: 599 NALGLDRCYLFVSGAAPLTPETSEFFLSLDIPIGEMYGMSESSGPHTVAVCENYRTHSCG 658
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ + G + + PD++G GE+C
Sbjct: 659 KILSGCKNMLYQPDKDGVGEVCF 681
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSI 438
L+ + ISF H+ +Q TV L D + VY A Q I+ N ++
Sbjct: 786 LDRLSSEAISFC--RHVGSQ------ASTVTEILQHQDPH---VYTAIQKGINEVNEVAV 834
Query: 439 SNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
SNAQKIQK+ L DF+I GELGPT KVKR FV +KY+ I Y
Sbjct: 835 SNAQKIQKWVILEKDFTIAGGELGPTAKVKRHFVTEKYKQQIYNLY 880
>gi|340382585|ref|XP_003389799.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Amphimedon queenslandica]
Length = 763
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 142/224 (63%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI +Y T+AKAF+KLGLE YH VCI+G N+PEW +++ I +GG G+Y TN
Sbjct: 177 EINYTQYYEMSLTIAKAFIKLGLEPYHGVCILGSNSPEWHIANMATIMSGGLPVGLYLTN 236
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+PEAC + ANI V+E+D L+KIL+++ + LKAIV Y GK P + G+ W
Sbjct: 237 TPEACCFIADSCKANIIVLENDAHLQKILQIRPRLTHLKAIVYY-GKICSPKEEGMYEWK 295
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+L ++ ++R +A +C +L+YTSGT G +K VMLSHDNIT+ + I++
Sbjct: 296 DLKKMAAGEERIGVERRFGLLAPEKCASLIYTSGTTGCAKGVMLSHDNITWMCSRILKET 355
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
K + VIS+LPLSH+A Q +DIY + + A++WFA +ALK
Sbjct: 356 KAKRGEERVISYLPLSHVATQLLDIYFPLAIGASVWFAQPDALK 399
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K++ +Q TTG+K I+ +AK L+ + P+ + L + KV+
Sbjct: 421 WEKISESMQLVARNTTGLKAKISQWAKGVGLKGNLQKQLGGSGTPFGWSLANLIFFKKVR 480
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+ +GLD+C ++G+APIS + YF+S++IP+ E++GMSE G TV+ DD + G
Sbjct: 481 RGLGLDQCHFPMTGSAPISQDTLSYFMSVNIPLHELYGMSETTGPTTVTTQDDIRFQSSG 540
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
R++ G + +I +PD+ GNGE+ ++
Sbjct: 541 RSLDGVRLRINNPDDAGNGEVLIQ 564
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K Q IDR N + KI K+ L DFSI +GEL TMK+KR F+ KY II
Sbjct: 700 RVLKMIQNGIDRVNRGAACKKHKIVKWSILDRDFSIQSGELTHTMKLKRRFITIKYSDII 759
Query: 481 DKFY 484
+ FY
Sbjct: 760 ESFY 763
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 12 SDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEWKKVT 71
S ++ +P I LG G AA+ PI++ + RT + VAL K+ G+WK++
Sbjct: 121 SSTFWSCDPSVGVTIQLGTEGAAAEKPITIIDMFHRTVTENGGSVALAYKRA-GQWKEIN 179
Query: 72 Y 72
Y
Sbjct: 180 Y 180
>gi|432102004|gb|ELK29824.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Myotis davidii]
Length = 540
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 142/233 (60%), Gaps = 7/233 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
Y R AKA LKLGLER+H V I+GFN+ EW + +G I AGG G+Y TNS +A
Sbjct: 45 NHYFEACRKAAKALLKLGLERFHGVGILGFNSVEWVIASVGTILAGGLCVGIYATNSADA 104
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYE---GKPDKPGVISWDELM 320
C + + + N+ +VE+D QL+KIL + + LKAIVQY+ + +K + SWD+ M
Sbjct: 105 CQYVIAQAKVNVLMVENDLQLQKILSIPPNKLGTLKAIVQYKMPMNESNKSNLYSWDDFM 164
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
+LG PD LD ++ + N+C L+YTSGT G K VMLSHDNIT+ A + + KL
Sbjct: 165 DLGNTVPDPQLDHIIASQKVNQCAVLIYTSGTMGNPKGVMLSHDNITWLAGTVAKDLKLT 224
Query: 381 SAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAI 430
A+ V+S+LPLSHIAA +DI+ M V +FA +ALK+ T + +
Sbjct: 225 CASEKQEVVVSYLPLSHIAALMMDIWLPMKVGGCTYFAQPDALKLRNRTDSVV 277
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELG 462
VY A Q ID N ++ SNAQKIQK+ L DFS GELG
Sbjct: 447 VYSAIQKGIDDVNQEATSNAQKIQKWVILEKDFSFYGGELG 487
>gi|440901084|gb|ELR52083.1| Long-chain-fatty-acid--CoA ligase ACSBG2, partial [Bos grunniens
mutus]
Length = 664
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 145/222 (65%), Gaps = 8/222 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R A+A LKLGLE +HSV I+GFN+ EW + LGAI+AGGF G+Y TN +AC
Sbjct: 80 YEA-CRKTARAMLKLGLEPFHSVGILGFNSIEWILAALGAIFAGGFCVGIYATNFADACE 138
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYEGKPDKP---GVISWDELMEL 322
+ + + NI +VE++ QL+KIL + + LKAIVQY+ D + SWD+ +EL
Sbjct: 139 YVITHAKVNILLVENNAQLQKILSIPMNKMETLKAIVQYKPPVDDSKCENLYSWDDFLEL 198
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G + PD LD+++++ N+C ++YTSGT G K VMLSHDNIT+ A + + L A
Sbjct: 199 GSSIPDAQLDQIIKSQKANQCAVIIYTSGTTGQPKGVMLSHDNITWTAGSVAKECNLAYA 258
Query: 383 ALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +D++ + V A ++FA+ +ALK
Sbjct: 259 PEKQEVVVSYLPLSHIAAQMMDVWVPIKVGAFIYFAEPDALK 300
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 91/143 (63%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ ++ +++ + +A++ L+ + P +YR+ + L+ +K+K
Sbjct: 322 WEKMHEKIKEAVGKSSSLRKKVFLWARNIGLKVNSKRMLGEHDHPMSYRMAKALVFTKIK 381
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
++GLD CR+ +SGAAP++ E +FLSLDIPI EV+GMSE +G HT+S P ++K G
Sbjct: 382 NSLGLDHCRIFISGAAPLNQETSEFFLSLDIPIGEVYGMSESSGPHTISTPANYKFLSSG 441
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ + G + + P+++G GE+CL
Sbjct: 442 KVVAGCKNMLYQPNKDGVGEVCL 464
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q I+ N K+ISNAQKIQK+ L DFSI GELGPT K+KR F+++KY+ I
Sbjct: 601 VYAAIQKGINAVNQKAISNAQKIQKWVILEKDFSISGGELGPTTKIKRHFILQKYKRQIY 660
Query: 482 KFY 484
FY
Sbjct: 661 SFY 663
>gi|221040690|dbj|BAH12022.1| unnamed protein product [Homo sapiens]
Length = 720
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 143/225 (63%), Gaps = 9/225 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLK + HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLK----QAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 188
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 189 PEACQYIAYDCCANVIMVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 248
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 249 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 308
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 309 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 353
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 108/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 375 WVKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 433
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP+ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 434 QALGFAKCQKNFYGAAPMMAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 493
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 494 KLVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 543
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 544 TGDAGRLDADGF 555
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
+K VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++K
Sbjct: 647 EKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEK 706
Query: 476 YQSIIDKFY 484
Y+ IID FY
Sbjct: 707 YKGIIDSFY 715
>gi|313747580|ref|NP_001186306.1| long-chain-fatty-acid--CoA ligase ACSBG1 isoform 2 [Homo sapiens]
Length = 720
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 143/225 (63%), Gaps = 9/225 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLK + HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLK----QAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 188
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 189 PEACQYIAYDCCANVIMVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 248
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A Q +
Sbjct: 249 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDI 308
Query: 380 ESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 309 RPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 353
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 375 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 433
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP+ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 434 QALGFAKCQKNFYGAAPMMAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 493
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 494 KLVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 543
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 544 TGDAGRLDADGF 555
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
+K VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++K
Sbjct: 647 EKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEK 706
Query: 476 YQSIIDKFY 484
Y+ IID FY
Sbjct: 707 YKGIIDSFY 715
>gi|340368127|ref|XP_003382604.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Amphimedon queenslandica]
Length = 658
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 139/225 (61%), Gaps = 9/225 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EY +V AK+ +KLGLE +H V I+GFN+PEWF++ +GAI AGG A G+YTTN+ E
Sbjct: 65 REYYDSVSGAAKSMVKLGLEAHHGVGILGFNSPEWFFTYIGAIMAGGIATGIYTTNNKET 124
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP--------GVISW 316
C + A I E++ Q+ K+L+ K P LK IVQY + +P GV+SW
Sbjct: 125 CQYIAKDCRAQIFFCENETQVNKLLEAKDSLPDLKVIVQYLPESVQPVSPRHKEAGVLSW 184
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
D+ ++ G+ PD L +E C +LVYTSGT G+ K VMLSHDN+T+ + +
Sbjct: 185 DQFIDCGKDVPDYELKWRIEAQKPGHCASLVYTSGTTGSPKGVMLSHDNLTWCGLVVAKR 244
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + +IS+LPLSHIAAQ +DI + + + T+WFA +ALK
Sbjct: 245 YDF-NENFRIISYLPLSHIAAQMIDIMAAVMIGHTVWFAQPDALK 288
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+ ++ MGL+ C + +GAAP+ + +F DI +C+++GMSE G +++P F
Sbjct: 363 VFKGLRSKMGLNNCIMMATGAAPLPRAVAEFFAQFDITLCQMYGMSETTGTGCINSPTCF 422
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN 235
+ VG+ PGT+ K+ P +GEICL+ R V +L E I F+
Sbjct: 423 RPFSVGQVAPGTEVKLDSPGPNRDGEICLRG-----RNVFMGYLH---EEAKMKEI--FD 472
Query: 236 APEWFYS-DLGAIYAGGF 252
W +S D+G++ GF
Sbjct: 473 EEGWLHSGDIGSVDKDGF 490
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V + Q ID+ N ++IS A +IQKF LP DFSI GE T+KVKR +++KY I
Sbjct: 585 VKQYIQQGIDKVNEEAISRAARIQKFTILPVDFSINGGEYTATLKVKRRVIIEKYHEHIT 644
Query: 482 KFY 484
Y
Sbjct: 645 HMY 647
>gi|194668334|ref|XP_001790634.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Bos taurus]
gi|297476776|ref|XP_002688930.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Bos taurus]
gi|296485772|tpg|DAA27887.1| TPA: acyl-CoA synthetase bubblegum family member 2 [Bos taurus]
Length = 678
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 145/222 (65%), Gaps = 8/222 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R A+A LKLGLE +HSV I+GFN+ EW + LGAI+AGGF G+Y TN +AC
Sbjct: 94 YEA-CRKTARAMLKLGLEPFHSVGILGFNSIEWILAALGAIFAGGFCVGIYATNFADACE 152
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYEGKPDKP---GVISWDELMEL 322
+ + + NI ++E++ QL+KIL + + LKAIVQY+ D + SWD+ +EL
Sbjct: 153 YVITHAKVNILLLENNAQLQKILSIPMNKMETLKAIVQYKPPVDDSKCENLYSWDDFLEL 212
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G + PD LD+++++ N+C ++YTSGT G K VMLSHDNIT+ A + + L A
Sbjct: 213 GSSIPDAQLDQIIKSQKANQCAVIIYTSGTTGQPKGVMLSHDNITWTAGSVAKECNLAYA 272
Query: 383 ALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +D++ + V A ++FA+ +ALK
Sbjct: 273 PEKQEVVVSYLPLSHIAAQMMDVWVPIKVGAFIYFAEPDALK 314
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 91/143 (63%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ ++ +++ + +A++ L+ + P +YR+ + L+ +K+K
Sbjct: 336 WEKMHEKIKEAVGKSSSLRKKVFLWARNIGLKVNSKRMLGEHDHPMSYRMAKALVFTKIK 395
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
++GLD CR+ +SGAAP++ E +FLSLDIPI EV+GMSE +G HT+S P ++K G
Sbjct: 396 NSLGLDHCRIFISGAAPLNQETSEFFLSLDIPIGEVYGMSESSGPHTISTPANYKFLSSG 455
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ + G + + P+++G GE+CL
Sbjct: 456 KVVAGCKNMLYQPNKDGVGEVCL 478
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q I+ N K+ISNAQKIQK+ L DFSI GELGPT K+KR F+++KY+ I
Sbjct: 615 VYAAIQKGINAVNQKAISNAQKIQKWVILEKDFSISGGELGPTTKIKRHFILQKYKRQIY 674
Query: 482 KFY 484
FY
Sbjct: 675 SFY 677
>gi|196001047|ref|XP_002110391.1| hypothetical protein TRIADDRAFT_49993 [Trichoplax adhaerens]
gi|190586342|gb|EDV26395.1| hypothetical protein TRIADDRAFT_49993 [Trichoplax adhaerens]
Length = 594
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 143/222 (64%), Gaps = 5/222 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EY ++R AK+F+ LGL++Y++V I GFN+PEW+ S+ G+++AGG + G+YTT+SPEA
Sbjct: 8 EEYYRDIRAAAKSFVHLGLQKYNAVAIFGFNSPEWYISNFGSMFAGGVSLGIYTTSSPEA 67
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD--KPGVISWDELMEL 322
+ L S+ I VVE+ L+++LK ++KAI+QY G+ + +P + +W + ++L
Sbjct: 68 IKYILEDSNTAIAVVENTASLKRVLKAAEGSLRIKAIIQYTGEIEEQQPNIYTWKDFIKL 127
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE-- 380
G+ DE LD I N+CC+L+YTSGT G K MLSHDN+ + A E
Sbjct: 128 GKDMSDEELDSRTADITPNKCCSLIYTSGTTGNPKGAMLSHDNLVWTAHVTWDRLYSELP 187
Query: 381 -SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +S+LPLSHIAAQ V++Y TV +++FA +ALK
Sbjct: 188 PTGPERFVSYLPLSHIAAQLVEVYMPTTVHGSVYFARPDALK 229
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 84/142 (59%), Gaps = 6/142 (4%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ KLQ G+K+ I N+AK L+ ++ E S P+ + + + L+ K+K
Sbjct: 251 WEKIAEKLQALARQNHGLKKKIGNWAKGVGLRGNLSVNEGG-SVPFGWGIAKALVFKKIK 309
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+GLD+C+ GAAPIS + +Y++S+D+ + EVFG++E +G T+S KL G
Sbjct: 310 VGLGLDKCKRRYVGAAPISKDAMKYYMSIDLSLQEVFGLTESSGPFTLSPVGGIKLGSCG 369
Query: 182 RTIPGTQTKIVDPDEEGNGEIC 203
I G +KI PDE+G GE+C
Sbjct: 370 IAIGGLDSKIDQPDEDGVGELC 391
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+ KA QA +DR N +S S AQK+QK + DFS+P GELGPT+K+KRP V+K Y +ID
Sbjct: 529 IKKAIQAGLDRVNERSKSRAQKVQKAHIIEKDFSVPGGELGPTLKLKRPVVLKLYADVID 588
Query: 482 KFY 484
K Y
Sbjct: 589 KVY 591
>gi|340379078|ref|XP_003388054.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Amphimedon queenslandica]
Length = 1206
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 140/225 (62%), Gaps = 9/225 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y A+ AK+ ++LGLE+++ V IIGFN+PEW S +G I AGG A G+YTTN+ EA
Sbjct: 64 EQYYADATRAAKSMIRLGLEQHYGVGIIGFNSPEWLLSYMGCILAGGIATGIYTTNTKEA 123
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP--------GVISW 316
C + S A I + ED KQL K+L+V+ + P LK IV+Y + +P GV++W
Sbjct: 124 CHYIADNSRAQIFICEDKKQLTKLLQVRDRLPHLKVIVKYIPESIEPLDPEMKESGVMTW 183
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
DE ME G+ PD L ++ C +L+YTSGT G K VMLSHDNI +++ + +
Sbjct: 184 DEFMEKGQGIPDYELSWRMDHQKPGHCASLIYTSGTTGPPKGVMLSHDNIVWSSTILAKS 243
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + S IS+LPLSHIA Q VDI + + + +WFA +ALK
Sbjct: 244 YD-ATEVESHISYLPLSHIAGQVVDIVTPALIGSCVWFAQPDALK 287
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ Y L + + ++ +GLDRCR+++S AAP+ + +F DIP+ + +GMSE G
Sbjct: 911 WGYWLAQKTCFNSLRDKLGLDRCRLTVSAAAPLPMAITEFFGDFDIPVFQAYGMSETTGV 970
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ +K GR++ G + KI PD EG+GEIC +
Sbjct: 971 SCLNCQGSYKPGAAGRSLIGIEIKIDKPDSEGDGEICFR 1009
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 392 LSHIAAQTVDIYSVMTVAATLWFA-DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFL 450
+ IA Q Y + + A T+ A + + +K Y Q +++AN ++IS A K+QKF L
Sbjct: 1115 MDSIAKQVA--YEIGSSATTVSEAMNDDVIKRY--IQQGMEQANEQAISRAAKVQKFAIL 1170
Query: 451 PADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
P DFS+ GEL PT K+KR FV +KY+ IID+ Y
Sbjct: 1171 PLDFSVDGGELTPTFKLKRKFVTEKYRDIIDQLY 1204
>gi|444730294|gb|ELW70681.1| Long-chain-fatty-acid--CoA ligase ACSBG1 [Tupaia chinensis]
Length = 689
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 144/249 (57%), Gaps = 33/249 (13%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y R AKAFLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+SPEAC
Sbjct: 189 QYYLLARKAAKAFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSSPEAC 248
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDELMELG 323
+ ANI VV+ KQLEKILK+ P LKA+V Y E P+K V + ++ MELG
Sbjct: 249 QYIAHDCRANIIVVDTQKQLEKILKIWKNLPHLKAVVIYRESPPEKMANVYTMEKFMELG 308
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
P+E+LD ++E N+CC LVYTSGT G K VMLS DN+ + + +++ A
Sbjct: 309 AEVPEEALDAIIEAQQPNQCCALVYTSGTTGPPKGVMLSQDNVGGMLGRAGEGWGIQAMA 368
Query: 384 LS-------------------------------VISFLPLSHIAAQTVDIYSVMTVAATL 412
V+S+LPLSHIAAQ D+++ + A +
Sbjct: 369 QPQQSPGKFLWPQTQSQKSQAGDIQPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQV 428
Query: 413 WFADKNALK 421
FA+ +ALK
Sbjct: 429 CFAEPDALK 437
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 459 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPCSDL-KPFTTRLADYLVLAKVR 517
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 518 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 577
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D G GEICL RT+ +L + + ++ +A W +
Sbjct: 578 KVVPGCRVKLVNEDAAGVGEICLWG-----RTIFMGYLNMEDKTREAI-----DADGWLH 627
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 628 TGDTGRLDADGF 639
>gi|320163284|gb|EFW40183.1| long-chain-fatty-acid-CoA ligase ACSBG2 [Capsaspora owczarzaki ATCC
30864]
Length = 661
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 139/225 (61%), Gaps = 6/225 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E +Y R KA LKLG++ + +V I+GFN+PEW + G I AGG G+YTTN
Sbjct: 75 ETTYGDYWKQSRRAGKALLKLGVQPFDTVGILGFNSPEWLIAFHGTIMAGGVGFGIYTTN 134
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP--DKPGVISWDE 318
+P+AC L + A I +VE++ QL KIL+V+A+ P LK IVQY GKP +P + SWD+
Sbjct: 135 TPDACQFVLEHAKAGIVIVENNVQLRKILEVRARLPDLKHIVQYIGKPSVSEPNIYSWDD 194
Query: 319 LMELG-RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
M LG AA +E L + + + + C +VYTSGT G K VM +HDNI F + Q
Sbjct: 195 FMALGDDAALEEPLQQRIANLRPEQPCAIVYTSGTTGNPKAVMTTHDNILFTVHVVSQLL 254
Query: 378 KL-ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
K+ ES L +SFLPLSHIAA +D+ + + +TL FA +ALK
Sbjct: 255 KIVESDVL--LSFLPLSHIAAMMIDVMAGAVLGSTLAFAQPDALK 297
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 87/145 (60%), Gaps = 6/145 (4%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLE-KNVSEPYTYRLVRWLILSKV 120
W+K+ K+Q G VK+ IA +AK L +A E K +P + L R L+ +KV
Sbjct: 319 WEKIAEKMQMVGASNGAVKKSIAGWAKKKGLAANLAIQEGKTKGKPSGWWLARSLVFAKV 378
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
K+A+GLDRCR + SGAAPIS YFLSLDIP+ E++GMSE TVS P+ ++
Sbjct: 379 KKAIGLDRCRAAFSGAAPISLSTLHYFLSLDIPVYELYGMSETTALLTVSIPNKYRSGSC 438
Query: 181 GRTIPGTQTKIVDPDEEGNGEICLK 205
G G + +I PD +GNGEI ++
Sbjct: 439 GYVPDGVEVRIAKPDADGNGEIVVR 463
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 421 KVYK-ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
KV+ +A++ N +ISNA I+++ F P DFSIP ELGPT+K+KR + KY +
Sbjct: 596 KVFNDVVEASMAEVNKHAISNAASIKRWAFCPVDFSIPGNELGPTLKLKRRVIQVKYSDL 655
Query: 480 IDKFYD 485
ID YD
Sbjct: 656 IDTLYD 661
>gi|312376080|gb|EFR23274.1| hypothetical protein AND_13180 [Anopheles darlingi]
Length = 723
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 152/277 (54%), Gaps = 57/277 (20%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +EY V +AK F+KLGLE +H+V ++ FN+PEWF S+L AI+AGG G+YTTNS
Sbjct: 83 VTYREYRERVYHMAKVFVKLGLEPHHTVAVLAFNSPEWFVSELAAIHAGGIITGVYTTNS 142
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ------------------ 303
E+ H L +S A I VV+D KQ+EK+ ++A P LKA++Q
Sbjct: 143 AESVQHVLESSRAQIVVVDDAKQMEKVHSIRANLPLLKAVIQTMPPYAPYVKRDDGYYRS 202
Query: 304 --------YEGKP-------DKPGVIS-----------------------WDELMELGRA 325
++G P PG + W EL+E+
Sbjct: 203 LREQQNMAFDGTPCARYNDDSLPGATTDRGPPNRKDIFREPSLAVARKGPWSELVEMNVD 262
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI-IQYFKLESAAL 384
+E + L IA N+CC LVYTSGT G K VMLSHD++T+++ I + +++ A
Sbjct: 263 DVEEEFNNRLANIAINQCCCLVYTSGTVGNPKGVMLSHDSLTWDSYSIGKRLYQIRYAEE 322
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++SFLPLSH+AAQ VDI+ + A T++FADK+A+K
Sbjct: 323 VLVSFLPLSHVAAQMVDIFLTLQFACTVYFADKDAMK 359
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 102/150 (68%)
Query: 56 VALCQKQENGEWKKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWL 115
+A+ + E + K ++ Q+T +++ +A +AKS +LQH++ +E + + YRLVR
Sbjct: 375 LAVPRVYEKIQEKMLSVGAQSTALRKMVAGWAKSVTLQHHLNAMEGKPTNSWQYRLVRNY 434
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+LSKVK A+G RC + AAP+ E K+YF+SLD+PI E FGMSE +GAH+++APD +
Sbjct: 435 LLSKVKDALGFSRCLTLATAAAPMDRETKKYFMSLDLPINEAFGMSESSGAHSLTAPDSY 494
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ +G+ + G +TKI PDE G+GEIC++
Sbjct: 495 NFNTIGKALAGCETKIDKPDERGHGEICMR 524
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV KA Q IDRANLK+ISNAQKIQKF L DFS+P GELGPT+KVKR V +K + II
Sbjct: 660 KVLKAIQEGIDRANLKAISNAQKIQKFALLKEDFSVPGGELGPTLKVKRNIVAEKNKEII 719
Query: 481 DKFY 484
+KFY
Sbjct: 720 EKFY 723
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 8 QILDSDLLYTTEPHGRTRIHLGEAGVAAQPPISVPGLLGRTAAQYPDQVALCQKQENGEW 67
+IL +D +T+P ++ + + G+A+ P+SVP L+ RT +PD A+ + +W
Sbjct: 21 RILPADSYTSTDPSKPVKLRITKEGLASLDPLSVPDLMNRTVRDHPDHPAMVYQDSQKKW 80
Query: 68 KKVTYK 73
+ VTY+
Sbjct: 81 QTVTYR 86
>gi|121583863|ref|NP_001073565.1| long-chain-fatty-acid--CoA ligase ACSBG2 [Rattus norvegicus]
gi|166198274|sp|A1L1K7.1|ACBG2_RAT RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG2; AltName:
Full=Acyl-CoA synthetase bubblegum family member 2
gi|120537436|gb|AAI29111.1| Acyl-CoA synthetase bubblegum family member 2 [Rattus norvegicus]
Length = 667
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 142/226 (62%), Gaps = 6/226 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +Y R A++ +KLGL+R+H V I+GFN+ EW + LGAI AGG G+Y TNS
Sbjct: 77 LTFSQYYDVCRKAARSLIKLGLQRFHGVGILGFNSVEWVVAALGAILAGGLCVGIYATNS 136
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYE--GKPDKPGVISWDE 318
EAC + + ++ N+ +VE+D+QL+KIL + + +KAIVQY + + SW +
Sbjct: 137 AEACQYVIKQANVNVLIVENDQQLQKILSIPPDKMETVKAIVQYRLPLMENSTNLYSWQD 196
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI---IQ 375
MELG A P+ LDRV+ + N+C ++YTSGT G+ K VMLSHDNIT+ A + I+
Sbjct: 197 FMELGNAIPNIQLDRVILSQKANQCAVIIYTSGTTGSPKGVMLSHDNITWTAGAMAREIE 256
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +++S+LPLSHIAAQ +DI+ + V +FA +AL+
Sbjct: 257 LIHVSGKQDTIVSYLPLSHIAAQLMDIWIPIKVGVLTFFAQPDALR 302
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 67/99 (67%)
Query: 106 PYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
P YR+ + L+ +KV+ ++GLD C SGA+P+S ++ +FLSLDIPI E++GM+EC+G
Sbjct: 368 PMNYRMAKALVFTKVRTSLGLDNCHTFFSGASPLSQDVSEFFLSLDIPIGEIYGMTECSG 427
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
HTVS +++ G+ + G + + +++G GE+C+
Sbjct: 428 PHTVSCKSIYRVLSCGKVLNGCKNMLYKQNKDGVGEVCM 466
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSI 438
L+ L ISF + + +Q V + ++ + + VY A Q ID N +++
Sbjct: 571 LDKLNLEAISFCQM--LGSQAVTVSDILKIRDPV---------VYTAIQYGIDIVNQQAV 619
Query: 439 SNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
S++ +I+K+ L DFSI GELGPT K+KR + +KY++ ID Y
Sbjct: 620 SDSHRIRKWIILEKDFSIQGGELGPTSKLKRDLITQKYKAQIDNMY 665
>gi|149028164|gb|EDL83602.1| similar to lipidosin [Rattus norvegicus]
Length = 698
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 142/226 (62%), Gaps = 6/226 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +Y R A++ +KLGL+R+H V I+GFN+ EW + LGAI AGG G+Y TNS
Sbjct: 108 LTFSQYYDVCRKAARSLIKLGLQRFHGVGILGFNSVEWVVAALGAILAGGLCVGIYATNS 167
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYE--GKPDKPGVISWDE 318
EAC + + ++ N+ +VE+D+QL+KIL + + +KAIVQY + + SW +
Sbjct: 168 AEACQYVIKQANVNVLIVENDQQLQKILSIPPDKMETVKAIVQYRLPLMENSTNLYSWQD 227
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI---IQ 375
MELG A P+ LDRV+ + N+C ++YTSGT G+ K VMLSHDNIT+ A + I+
Sbjct: 228 FMELGNAIPNIQLDRVILSQKANQCAVIIYTSGTTGSPKGVMLSHDNITWTAGAMAREIE 287
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +++S+LPLSHIAAQ +DI+ + V +FA +AL+
Sbjct: 288 LIHVSGKQDTIVSYLPLSHIAAQLMDIWIPIKVGVLTFFAQPDALR 333
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 67/99 (67%)
Query: 106 PYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
P YR+ + L+ +KV+ ++GLD C SGA+P+S ++ +FLSLDIPI E++GM+EC+G
Sbjct: 399 PMNYRMAKALVFTKVRTSLGLDNCHTFFSGASPLSQDVSEFFLSLDIPIGEIYGMTECSG 458
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
HTVS +++ G+ + G + + +++G GE+C+
Sbjct: 459 PHTVSCKSIYRVLSCGKVLNGCKNMLYKQNKDGVGEVCM 497
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSI 438
L+ L ISF + + +Q V + ++ + + VY A Q ID N +++
Sbjct: 602 LDKLNLEAISFCQM--LGSQAVTVSDILKIRDPV---------VYTAIQYGIDIVNQQAV 650
Query: 439 SNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
S++ +I+K+ L DFSI GELGPT K+KR + +KY++ ID Y
Sbjct: 651 SDSHRIRKWIILEKDFSIQGGELGPTSKLKRDLITQKYKAQIDNMY 696
>gi|195397776|ref|XP_002057504.1| GJ18167 [Drosophila virilis]
gi|194141158|gb|EDW57577.1| GJ18167 [Drosophila virilis]
Length = 679
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 140/228 (61%), Gaps = 14/228 (6%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+YE V A L +GLE S+ ++ FN PEWF+++LGA+ AGG AG+Y +NS EAC
Sbjct: 72 DYEKRVEQAALMMLHVGLEERSSLAVLAFNCPEWFFAELGALRAGGVVAGIYPSNSAEAC 131
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD-----KPGVISWDELM 320
H LVTSDA +CVV+DDKQ+ K+ +K + P+LKA++Q G + +P SW +L
Sbjct: 132 YHALVTSDATVCVVDDDKQMAKLRAIKHRLPRLKAVIQLHGPYESFVNQEPDYFSWQQLT 191
Query: 321 ELGRAAPDESLDRVLET----IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
+ + L + LE I N+C L++TSGT G K VML+HD++ ++ +
Sbjct: 192 QTLETLDTDQLQQELERRERGIYANDCAMLIFTSGTVGMPKAVMLTHDSVVYDTKIVSA- 250
Query: 377 FKLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+E+ L ++S+LPLSHIAAQ DI+ M+ ++FADK+ALK
Sbjct: 251 -TMENTVLGAERLVSYLPLSHIAAQIFDIFVAMSHGGCVYFADKDALK 297
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 81 RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPIS 140
R + + A+ QH +A + P L LI+ ++Q +GL+ C+ L+G AP+S
Sbjct: 338 RLLLSKAREVVAQHQLAIIAGLFIRPGQV-LAGHLIVRPIRQMLGLELCKSFLTGGAPVS 396
Query: 141 TELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNG 200
ELK++FL LD+P+ +V+GMSE GA T++ L G I GT+ KI PD G G
Sbjct: 397 PELKQFFLGLDMPLADVYGMSETGGAITLNESIT-NLYSSGAPILGTEVKIDKPDVNGQG 455
Query: 201 EICLK 205
EI ++
Sbjct: 456 EILMR 460
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 11/104 (10%)
Query: 392 LSHIAAQTVDIYSVMTVAATLWF-ADKNAL----------KVYKATQAAIDRANLKSISN 440
L+ + Q + ++ + A L +D NAL K+ +A +A I RAN +IS
Sbjct: 575 LNELGLQQTLLSELLNIPADLQLPSDANALAAALEINAEPKLLEALEAGIKRANKNAISK 634
Query: 441 AQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AQ +QKF LP +F++ TGELGPT+K++R V KY +ID+ Y
Sbjct: 635 AQCVQKFALLPHEFTLATGELGPTLKIRRNIVHTKYGPLIDRLY 678
>gi|348550688|ref|XP_003461163.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Cavia
porcellus]
Length = 844
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 139/226 (61%), Gaps = 6/226 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +Y RT +A LKLGL+R+H V I+G N+ EW + +GAI AGG G+Y+T+S
Sbjct: 255 LSFAQYYTACRTAGRALLKLGLQRFHGVGILGSNSKEWLIAAVGAIMAGGLCVGIYSTSS 314
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQY--EGKPDKPGVISWDE 318
+AC + + + NI V E+D+QL KIL + + LKAIV Y + + + SWDE
Sbjct: 315 ADACQYVIAHAKVNILVAENDQQLRKILSIPHHRLEPLKAIVLYSSDTRHGTNNLYSWDE 374
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
MELG + PD LD+++++ N+C L+YTSGT G VMLSHDNIT+ ++Q
Sbjct: 375 FMELGNSVPDAQLDQIIKSQKANQCAVLIYTSGTVGDPMGVMLSHDNITWTTRAVVQDLG 434
Query: 379 LESAA---LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L + + V+S+LPLSHIA Q +DI+ + + A +FA +AL+
Sbjct: 435 LATTSGKQERVLSYLPLSHIATQMIDIWIPLRIGALTYFAQPDALR 480
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 16/213 (7%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K+ + ++A+ L+ ++ + Y + + L+ +KV+ ++GLD C LSGAAP+
Sbjct: 520 KKKMFHWAERVGLKTHLRQMLGKTDLSMNYHMAKKLVFNKVRSSLGLDHCHSFLSGAAPL 579
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
S +FL+LD+PI E +G+SE +G HT+S+ D+K+ G+ + G ++ ++ ++
Sbjct: 580 SEATLEFFLNLDVPISESYGLSESSGPHTISSWRDYKVLSCGKPLSGCKSLLLGDGQDSP 639
Query: 200 GEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYT 258
GE+C+ R V + LER + + + W +S DLG + GF +Y
Sbjct: 640 GEVCMWG-----RHVFMGY----LEREDATKEM-VDEAGWLHSGDLGHVDGQGF---LYI 686
Query: 259 TNSPEACLHCLVTSDANICVVEDDKQLEKILKV 291
T + L + N+ V + ++K L +
Sbjct: 687 TGRIKELL--ITAGGENVAPVRIEALVKKTLPI 717
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM-----TVAATLWF 414
+L D TF C++ K E+ + + PL + +Q +D + TV+ +
Sbjct: 722 ILVGDRATF--LCVLLTLKCET---NPTNGEPLDQLTSQAIDFCKALGSQASTVSEIVRS 776
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
D VY A Q ID N ++ SNA++I+K+ L DFSI GELGPT K++R F+ +
Sbjct: 777 QDP---LVYAAIQRGIDTVNKEATSNAERIRKWAILEKDFSIRGGELGPTTKMRRCFITQ 833
Query: 475 KYQSIIDKFY 484
KY+S I+ FY
Sbjct: 834 KYKSQIEGFY 843
>gi|301107486|ref|XP_002902825.1| long-chain-fatty-acid-CoA ligase [Phytophthora infestans T30-4]
gi|262097943|gb|EEY55995.1| long-chain-fatty-acid-CoA ligase [Phytophthora infestans T30-4]
Length = 646
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 134/217 (61%), Gaps = 10/217 (4%)
Query: 215 AKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDA 274
AK+ L +GLERY V IIGFN+PEW +D+GAI+AGG AAG+YTTNSP+AC SD+
Sbjct: 72 AKSLLHVGLERYQGVSIIGFNSPEWAIADVGAIFAGGVAAGIYTTNSPKACEFIAKHSDS 131
Query: 275 NICVVEDDKQLEKILKVKAQCPKLKAIVQY-----EGKPDKPGVISWDELMELGRAAPDE 329
+ V + KQLEK L + PKLKA+V + EG V S+++ MELG+ DE
Sbjct: 132 GVVVCDGMKQLEKFLAIAKDLPKLKALVMWNDVVPEGTQSPVPVYSFEDFMELGKDVKDE 191
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE-----SAAL 384
+L ++++ CCTL+YTSGT G K VM+SHDN+ + ++ K
Sbjct: 192 TLKEIMDSQKPGNCCTLIYTSGTTGDPKAVMISHDNVVWTIMSVVGMIKRNFNHQMHNGD 251
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LP+SH+AAQ +DI+ + ++FA +ALK
Sbjct: 252 RLVSYLPMSHVAAQLIDIWLPICGGLQIYFAQPDALK 288
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 6/137 (4%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHY-MAYLEKNVSEPYTYRLVRWLILSKV 120
W+K+ K+ QTTG+K+ IA +AK + Q +A + P + + ++L +V
Sbjct: 310 WEKIAEKMWSIAAQTTGIKKRIAAWAKDKAAQKTALAQYGNSGGAPCGFGVANAVVLMRV 369
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
K+A+GLD+C S SGAAPIS E+ YF SLD+P+ E FG SE G T S ++K+
Sbjct: 370 KEALGLDQCIASFSGAAPISKEVVEYFGSLDLPVYEFFGQSEACGPQTCSMQGNWKISTC 429
Query: 181 GRTIPGTQTKIVDPDEE 197
GRTI G++TK++ +E
Sbjct: 430 GRTIDGSETKVLPNTDE 446
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + RAN ++ S AQ + K+ L DFSI EL PT+K+KR V +K +SII
Sbjct: 582 KVKTYLDEGLKRANGRATSRAQNVAKYTVLDHDFSINGNELTPTLKLKRKVVYEKNESII 641
Query: 481 DKFY 484
D Y
Sbjct: 642 DSLY 645
>gi|348671126|gb|EGZ10947.1| hypothetical protein PHYSODRAFT_355310 [Phytophthora sojae]
Length = 646
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 135/217 (62%), Gaps = 10/217 (4%)
Query: 215 AKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDA 274
AK+ L +GLERY V IIGFN+PEW +D+GAI+AGG AAG+YTTN+P+AC SD+
Sbjct: 72 AKSLLHVGLERYQGVSIIGFNSPEWAIADVGAIFAGGVAAGIYTTNNPKACEFIAKHSDS 131
Query: 275 NICVVEDDKQLEKILKVKAQCPKLKAIVQY-----EGKPDKPGVISWDELMELGRAAPDE 329
+ V + KQLEK L ++ PKLKA+V + EG V S+++ MELG+ DE
Sbjct: 132 GVVVCDGMKQLEKFLAIEKNLPKLKALVVWNDVVPEGIQSNVPVYSFEDFMELGKDVKDE 191
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE-----SAAL 384
+L ++++ CCTL+YTSGT G K VM+SHDN+ + +I K
Sbjct: 192 TLKEIMDSQKPGNCCTLIYTSGTTGDPKAVMISHDNVVWTIMSVIGMIKRNFNHQMHNGD 251
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LP+SH+AAQ +DI+ + ++FA +ALK
Sbjct: 252 RLVSYLPMSHVAAQLIDIWLPICGGLQIYFAQPDALK 288
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 6/137 (4%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHY-MAYLEKNVSEPYTYRLVRWLILSKV 120
W+K+ K+ QTTG+K+ IA +AK + Q +A + P + + ++L +V
Sbjct: 310 WEKIAEKMWSISAQTTGIKKRIATWAKDKAAQKTELAQYGNSGGAPCGFGVANAVVLMRV 369
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
K+A+GLD+C S SGAAPIS E+ YF SLD+P+ E FG SE G T S ++K+
Sbjct: 370 KEALGLDQCIASFSGAAPISREVVEYFGSLDLPVYEFFGQSEACGPQTCSMQGNWKISTC 429
Query: 181 GRTIPGTQTKIVDPDEE 197
GRTI G++TK+V EE
Sbjct: 430 GRTIDGSETKVVPGTEE 446
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + RAN ++ S AQ I K+ L DFSI EL PT+K+KR V +KY+S+I
Sbjct: 582 KVKAYLDGGLKRANGRATSRAQNIGKYTVLDHDFSINGNELTPTLKLKRKVVYEKYESVI 641
Query: 481 DKFY 484
+ Y
Sbjct: 642 EGMY 645
>gi|195115800|ref|XP_002002444.1| GI12736 [Drosophila mojavensis]
gi|193913019|gb|EDW11886.1| GI12736 [Drosophila mojavensis]
Length = 674
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 131/223 (58%), Gaps = 6/223 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EY+ V A+ L +GLE S+ I+ FN PEWF ++L A+ AGG AG+Y +NS EA
Sbjct: 67 EEYQQQVELAARMLLHVGLEARSSLGILAFNCPEWFIAELAALRAGGVLAGIYPSNSAEA 126
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD-----KPGVISWDEL 319
C H L TS+A +CVV+D+KQ+ K+ +K + P+LK ++Q G + + G SW L
Sbjct: 127 CFHALATSEATVCVVDDEKQMAKLRAIKHRLPRLKTVIQLHGPYESFVNQEEGYFSWQHL 186
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK- 378
M L L R I N+C LV+TSGT G K VMLSHD++ F + K
Sbjct: 187 MALDLEQLQPELQRRESAIYANDCAMLVFTSGTVGMPKAVMLSHDSLVFETKIVGATLKN 246
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
E ++S+LPLSHIAAQ D++ + ++FAD++ALK
Sbjct: 247 TELGGERIVSYLPLSHIAAQIFDVFLALEHGGCVYFADRDALK 289
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+Y+A A I RANLK+IS+AQ++QKF LP +FS+PTGELGPT+K +R V KKY +I
Sbjct: 610 KLYEAIDAGIKRANLKAISSAQRVQKFALLPHEFSVPTGELGPTLKTRRNIVHKKYAPLI 669
Query: 481 DKFY 484
++ Y
Sbjct: 670 ERLY 673
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ +RL+R ++Q +GLD C+ L+GAAP+S+ELK YFL LD+P+ +++GMSE AGA
Sbjct: 363 FAHRLIR-----PIRQMLGLDLCKTFLTGAAPVSSELKHYFLGLDMPLGDIYGMSESAGA 417
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
T+ L G + G + KI +PD +G GEI +
Sbjct: 418 ITLHETMT-NLYSSGTPLVGIEVKIHEPDAKGQGEIVTR 455
>gi|354479301|ref|XP_003501850.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Cricetulus griseus]
Length = 658
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 140/227 (61%), Gaps = 7/227 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +Y R AK+ +KLGL+R+H V I+G N+PEW +GAI AGG G+Y TNS
Sbjct: 77 LTFSQYYEACRKAAKSLIKLGLQRFHGVGILGSNSPEWVIGAIGAILAGGLCVGIYATNS 136
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYEGKPDKPG--VISWDE 318
EAC + + + N+ +VE+D+QL+KIL + + +K IVQY+ ++ G + SW +
Sbjct: 137 AEACQYVIEHARLNVLLVENDQQLQKILSIPPDKRESVKTIVQYKLPLEESGRNLYSWHD 196
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
MELG A + LDR++ + N+C L+YTSGT G K VMLSHDNIT+ + + + +
Sbjct: 197 FMELGNAITNMQLDRIILSQNPNQCAVLIYTSGTTGEPKGVMLSHDNITWTSGAMARELE 256
Query: 379 LESAAL----SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L S++S+LPLSHI+AQ +DI+ + V +FA +AL+
Sbjct: 257 LSHHTSGHQNSIVSYLPLSHISAQMMDIWIPIKVGGITFFAQPDALR 303
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++ ++G+++ + +AK L+ + P YR+ + L+ +K++
Sbjct: 325 WEKMQENIKENIYKSSGLRKKVFTWAKMLGLKVNTKRMLGKQDVPMNYRMAKALVFTKIR 384
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
++GLD C SG AP+S ++ +FLSLDIPI E++G+SEC+G H+VS+ + +K+ G
Sbjct: 385 NSLGLDNCHSFFSGTAPLSQDILEFFLSLDIPIGEIYGLSECSGPHSVSSNNSYKILSCG 444
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
R + G Q + +++G GEIC+
Sbjct: 445 RILNGCQNMLYQQNKDGVGEICI 467
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 346 LVYTSGTEGASKPV---MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDI 402
+ T+G E S PV L + I + ++Q++ L+S +S PL ++ + V+
Sbjct: 516 FLITAGGENVS-PVPIESLVKERIPIISNAMLQWWGLQSET-DQMSGEPLDKLSLEAVNF 573
Query: 403 YSVMTVAATLW--FADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGE 460
+ A + VY A Q ID N ++ S+ Q+I+K+ L DFSI GE
Sbjct: 574 CRALGSKAVTVSDIVKQRDPMVYTAIQCGIDMVNQEAASDGQRIRKWLILDKDFSIYGGE 633
Query: 461 LGPTMKVKRPFVVKKYQSIIDKFY 484
LG T K++R + +KY++ ID Y
Sbjct: 634 LGQTSKLRRCIISQKYKTQIDSMY 657
>gi|195031704|ref|XP_001988379.1| GH11133 [Drosophila grimshawi]
gi|193904379|gb|EDW03246.1| GH11133 [Drosophila grimshawi]
Length = 685
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 135/222 (60%), Gaps = 7/222 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y V A L +GLE S+ I+ FN PEWF ++LGA+ AGG AG+Y +NSPEA
Sbjct: 79 YAKRVEQAALMLLHVGLEERSSLGILAFNCPEWFLAELGALRAGGIVAGIYPSNSPEAVH 138
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ----YEGKPDK-PGVISWDEL-M 320
H L TS+A +C+V+DDKQ+ K+ +K + P+LKA++Q Y+ D+ G SW +L +
Sbjct: 139 HALATSEATVCIVDDDKQMAKLRAIKHRLPRLKAVIQLHPPYDSFVDREEGFHSWQQLEL 198
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-L 379
+ + L R + I NEC L++TSGT G K VMLSHD+I F+A + +
Sbjct: 199 SVYGTELQQELLRREQAIYANECAMLIFTSGTVGMPKAVMLSHDSIVFDAKIVSDTIENT 258
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A ++S+LPLSHIAAQ DI MT ++FADK+ALK
Sbjct: 259 VVGAERLVSYLPLSHIAAQVFDICLAMTFGGCVYFADKDALK 300
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 22/117 (18%)
Query: 390 LPLSHIAAQTVD-----------IYSVMTVAATLWF-ADKNAL----------KVYKATQ 427
LPL + A+T++ + ++ + A L +D NAL K+ A +
Sbjct: 568 LPLDELRAETIEWLQQLGLHQTHLSDLLNIRADLKLPSDSNALAAALKIDAEPKLLAALE 627
Query: 428 AAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A I RAN+ +ISNAQ++QKF LP +F+ TGELGPT+K++R V KY +ID+ Y
Sbjct: 628 AGIKRANVNAISNAQRVQKFALLPHEFTTATGELGPTLKIRRNIVRAKYAPLIDRLY 684
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 81 RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVR-WL---ILSKVKQAMGLDRCRVSLSGA 136
R + + A+ QH +A + Y L + WL ++ +++ +GLD+C+ L+G
Sbjct: 341 RLLLSKARELMTQHQLAKIAGEKCS--MYGLAKYWLAARLIRPIREMLGLDQCKTFLTGG 398
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
AP+++ELK YFL LD+P+ +++GMSE GA T+ A L G + G + I +PD
Sbjct: 399 APVTSELKHYFLGLDMPLGDIYGMSEMGGAVTMHA-HITNLYSSGAPLRGIEMIIHEPDA 457
Query: 197 EGNGEICLK 205
G GEI L+
Sbjct: 458 SGQGEIWLR 466
>gi|395851102|ref|XP_003798105.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG2-like [Otolemur garnettii]
Length = 649
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 144/240 (60%), Gaps = 7/240 (2%)
Query: 186 GTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLG 245
GT +V + + +Y A++ LKLGLE +H V I+GF + +WF + LG
Sbjct: 51 GTHPALVSKNGNKWEILNFSQYYEACWKAARSLLKLGLECFHGVGILGFKSVQWFVAALG 110
Query: 246 AIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQY 304
+I AGG G+Y TNS EAC + + + NI +VE+D+Q++KI+ + +++ LKAIV+Y
Sbjct: 111 SIIAGGLCVGIYATNSVEACQYVIGQAKVNILLVENDQQIQKIILIPRSRLETLKAIVRY 170
Query: 305 ----EGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVM 360
+ D G +SWD+ MELG + PD L+R++E+ N+C ++ TSGT G K M
Sbjct: 171 RLPIKESGDNRGFVSWDDFMELGSSIPDTQLERIIESQKANQCALIICTSGTIGPPKGAM 230
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNAL 420
LSHDNI + A + + F L V+S+LPLSHIAAQ +DI+ + A +FA +AL
Sbjct: 231 LSHDNIMWMAGAVSKDFGLLEKRELVVSYLPLSHIAAQMMDIWX--KIGAVTYFAQPDAL 288
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 82 WIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPIST 141
W T+ + + E N+S Y + L+ SK++ ++GLD C +S+S AAPI+
Sbjct: 333 WAKTIGFWTNTKRMVGKQETNMS----YYVANSLVFSKIRSSLGLDHCHISISVAAPITK 388
Query: 142 ELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGE 201
E F SLDIPI EV G++E +G H +S +F+L + + G + + ++EG GE
Sbjct: 389 ETAE-FXSLDIPIGEVHGLTESSGPHAISTYYNFRLLSCSKILTGCKNMPFEQNKEGIGE 447
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
IC+ + +++ T L + F W +S DLG + GF
Sbjct: 448 ICMSDRQSSWTTWRSEVETLEV----------FGEEGWLHSADLGHMDNQGF 489
>gi|189230342|ref|NP_001121495.1| acyl-CoA synthetase bubblegum family member 1 [Xenopus (Silurana)
tropicalis]
gi|183985992|gb|AAI66305.1| LOC100158596 protein [Xenopus (Silurana) tropicalis]
Length = 254
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 112/168 (66%), Gaps = 2/168 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+ +Y R AK+FLKLGLER+HSV I+GFN+ EWF S +G ++AGG G+YTTN
Sbjct: 73 HVTFMDYYKLCRQAAKSFLKLGLERFHSVGILGFNSEEWFISAIGTVFAGGIITGIYTTN 132
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDE 318
SPEAC + NI VVE+ KQLEKIL++ P LKA+VQY+G + +P + +W+E
Sbjct: 133 SPEACHYVASDCKMNIIVVENQKQLEKILQIWDGLPHLKAVVQYKGNLQEKRPNLYTWEE 192
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI 366
ME G+ D LD ++ + N+CC L+YTSGT G K VMLSHDN+
Sbjct: 193 FMEFGKDIADAHLDDIINSQKANQCCVLIYTSGTTGNPKGVMLSHDNV 240
>gi|117935034|ref|NP_084417.1| uncharacterized protein LOC78625 [Mus musculus]
gi|115528871|gb|AAI16284.1| RIKEN cDNA 1700061G19 gene [Mus musculus]
Length = 705
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 136/214 (63%), Gaps = 5/214 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AKAFLK+GLER+H V I+G N+ EW + +GAI AGG + G+ ++ SP+AC
Sbjct: 107 EYYEACRRAAKAFLKVGLERFHGVGIMGINSSEWVIASIGAIMAGGISVGILSSISPKAC 166
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELG 323
TS+ +I VV++D+QL+KI +++ LKAI+QY + + +P + SW ++L
Sbjct: 167 QVIAETSEMDIFVVDNDRQLQKINQIQGYLKHLKAIIQYREDIQEAQPNLYSWKGFLDLA 226
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY--FKLES 381
DE LD++++T+ N+CC LVY GT G SK +MLSHDNIT+ A I+Q FK
Sbjct: 227 DGISDEKLDKIIDTLKPNQCCALVYNQGTTGPSKAIMLSHDNITWTTAAIVQSLGFKCPP 286
Query: 382 AALSV-ISFLPLSHIAAQTVDIYSVMTVAATLWF 414
+ +S+LPL Q +D++ ++VA T++F
Sbjct: 287 QGQEILVSYLPLCFPGIQILDVWVAISVAGTVYF 320
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 72/131 (54%)
Query: 74 LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSL 133
L +T +R I ++A L + + +P + L + L + ++ +GL+ C+ L
Sbjct: 371 LDSTAFRRRIDHWAMRMGLHTNKKLMMGEIHQPLCFGLAKRLTFERARKFLGLNHCQQFL 430
Query: 134 SGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVD 193
+ + + +FLS++IPI E++G+SEC G HTVS +++ G+ +P T TK+
Sbjct: 431 NMGMGLPSGTLDFFLSVNIPIMELYGLSECTGLHTVSNLQAYRILSAGKALPKTHTKVEK 490
Query: 194 PDEEGNGEICL 204
+++G G +C+
Sbjct: 491 ENKDGIGNLCI 501
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
D++ L V + I+ N ++ + KI K+ L DFS+ GELGP K+ R VVK
Sbjct: 633 DRDPL-VTEFINQGIEDVNSEAPTMGAKIIKWVILDNDFSVDGGELGPMSKMNRSIVVKI 691
Query: 476 YQSIIDKFYD 485
YQ I K Y+
Sbjct: 692 YQEEIQKLYE 701
>gi|148706264|gb|EDL38211.1| mCG127436, isoform CRA_d [Mus musculus]
Length = 715
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 135/214 (63%), Gaps = 5/214 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AKAFLK+GLER+H V I+G N+ EW + +GAI AGG + G+ ++ SP+AC
Sbjct: 117 EYYEACRRAAKAFLKVGLERFHGVGIMGINSSEWVIASIGAIMAGGISVGILSSISPKAC 176
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELG 323
TS+ +I VV++D+QL+KI +++ LKAI+QY + + +P + SW ++L
Sbjct: 177 QVIAETSEMDIFVVDNDRQLQKINQIQGYLKHLKAIIQYREDIQEAQPNLYSWKGFLDLA 236
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
DE LD++++T+ N+CC LVY GT G SK +MLSHDNIT+ A I+Q +
Sbjct: 237 DGISDEKLDKIIDTLKPNQCCALVYNQGTTGPSKAIMLSHDNITWTTAAIVQSLGFKCPP 296
Query: 384 LS---VISFLPLSHIAAQTVDIYSVMTVAATLWF 414
++S+LPL Q +D++ ++VA T++F
Sbjct: 297 QGQEILVSYLPLCFPGIQILDVWVAISVAGTVYF 330
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 72/131 (54%)
Query: 74 LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSL 133
L +T +R I ++A L + + +P + L + L + ++ +GL+ C+ L
Sbjct: 381 LDSTAFRRRIDHWAMRMGLHTNKKLMMGEIHQPLCFGLAKRLTFERARKFLGLNHCQQFL 440
Query: 134 SGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVD 193
+ + + +FLS++IPI E++G+SEC G HTVS +++ G+ +P T TK+
Sbjct: 441 NMGMGLPSGTLDFFLSVNIPIMELYGLSECTGLHTVSNLQAYRILSAGKALPKTHTKVEK 500
Query: 194 PDEEGNGEICL 204
+++G G +C+
Sbjct: 501 ENKDGIGNLCI 511
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
D++ L V + I+ N ++ + KI K+ L DFS+ GELGP K+ R VVK
Sbjct: 643 DRDPL-VTEFINQGIEDVNSEAPTMGAKIIKWVILDNDFSVDGGELGPMSKMNRSIVVKI 701
Query: 476 YQSIIDKFYD 485
YQ I K Y+
Sbjct: 702 YQEEIQKLYE 711
>gi|84993736|ref|NP_001034203.1| long-chain-fatty-acid--CoA ligase ACSBG2 [Mus musculus]
gi|123779881|sp|Q2XU92.1|ACBG2_MOUSE RecName: Full=Long-chain-fatty-acid--CoA ligase ACSBG2; AltName:
Full=Acyl-CoA synthetase bubblegum family member 2;
AltName: Full=Bubblegum-related protein
gi|80975782|gb|ABB54488.1| ACSBG2 [Mus musculus]
gi|148706260|gb|EDL38207.1| mCG5594 [Mus musculus]
Length = 667
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 140/226 (61%), Gaps = 6/226 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +Y R AK+ +KLGL+R+ V I+GFN+ EW + LG I AGG G+Y TNS
Sbjct: 77 LTFSQYYEMCRKAAKSLIKLGLQRFQCVGILGFNSVEWVVTALGTILAGGLCVGIYATNS 136
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYE--GKPDKPGVISWDE 318
EAC + + ++ +I +VE+D+QL+KIL + + +KAIVQY+ + SW++
Sbjct: 137 AEACQYVIQQANVSILIVENDQQLQKILLIPPDKMETVKAIVQYKLPLMESMANLYSWND 196
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
MELG P+ LDRV+ + N+C ++YTSGT G K V+LSHDNIT+ A + Q +
Sbjct: 197 FMELGNDIPNIQLDRVILSQKANQCAVILYTSGTTGTPKGVLLSHDNITWTAGAMSQEME 256
Query: 379 LESAA---LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + +++S+LPLSHIAAQ DI+ + + A +FA +AL+
Sbjct: 257 INRVSGKQNTIVSYLPLSHIAAQLTDIWIPIKIGALTFFAQPDALR 302
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 67/99 (67%)
Query: 106 PYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
P YR+ + L+ +KV+ ++GLD C S A+P+S ++ +FLSLDIPI E++GMSEC+G
Sbjct: 368 PMNYRMAKALVFAKVRTSLGLDNCHAFFSSASPLSQDVSEFFLSLDIPIGEIYGMSECSG 427
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
HTVS +++ G+ + G + + + ++EG GE+C+
Sbjct: 428 PHTVSNKSVYRVLSCGKVLSGCKNMLYNQNKEGVGEVCM 466
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY A Q ID N +++S++ +I+K+ L DFSI GELGPT K+KR + +KY++ ID
Sbjct: 603 VYTAIQYGIDIVNQQAMSDSHRIRKWIILEKDFSIQGGELGPTSKLKRSVITQKYKAQID 662
Query: 482 KFY 484
Y
Sbjct: 663 SMY 665
>gi|219117691|ref|XP_002179636.1| long chain acyl-coa synthetase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217408689|gb|EEC48622.1| long chain acyl-coa synthetase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 663
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 137/228 (60%), Gaps = 12/228 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
KEY V + KA LK+G R+ ++ IIGFNAPEWF+++ GAI AGG AG+YTTN+PEA
Sbjct: 71 KEYRQQVDSFGKALLKVGFARFDTINIIGFNAPEWFFANFGAIAAGGIPAGVYTTNNPEA 130
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY---------EGKPDKPGVIS 315
C + S+A + V E KQLEK ++ P L A+V Y + K P V +
Sbjct: 131 CAYVAEHSEAKVVVCEGVKQLEKYYEISRNLPNLTALVMYGTDSIPEDVKSKCSVP-VYT 189
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
++ ++LG+ D L ++ E CTL+YTSGT G K VM+++DNIT+ ++
Sbjct: 190 FEGFLDLGKDVSDTDLKARTDSWKAGETCTLIYTSGTTGPPKAVMITNDNITWTIETLMG 249
Query: 376 YFKLESAALS--VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + + +IS+LPLSHIAAQ +D+++ M L+FAD NALK
Sbjct: 250 RTRKGTLDHNDVMISYLPLSHIAAQMLDMHNPMATGTQLYFADANALK 297
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 13/146 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHY--MAYLEKNVSEPYTYRLVRWLILSK 119
W+K+ KLQ +TG+K+ ++ +AK + H+ + Y K+ S P+ L + L L K
Sbjct: 319 WEKIYDKLQEVARSSTGIKKMLSTWAKGKAAAHWESLEYGSKSGS-PFMLFLAKKL-LHK 376
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG 179
A+G DRC AAPI ++ +YF+SLDIPI E+FG SEC G H V+ D FK+
Sbjct: 377 AHLALGFDRCIQFYVSAAPIEVKILKYFMSLDIPIMELFGQSECTGPHAVNGYDAFKVGT 436
Query: 180 VGRTIPGTQTKIVDPDEEGNGEICLK 205
VGR + GT+TKI +E GE+C +
Sbjct: 437 VGRPLIGTETKI----DEATGELCYR 458
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++ AN K+IS A ++ K+ L DFS GEL PTMK+KR +K+ ID Y
Sbjct: 607 GLEVANKKAISRASRVGKWALLSTDFSEVGGELTPTMKLKRNVTAEKFADTIDAMY 662
>gi|449472105|ref|XP_004176518.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG1 [Taeniopygia guttata]
Length = 643
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 140/227 (61%), Gaps = 9/227 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I EY R AK+FLKLGLE HSV I+GFN+PEWF S +GAI+AGG G+YTTN
Sbjct: 60 KITFSEYYCLSRKAAKSFLKLGLEXIHSVAILGFNSPEWFISAVGAIFAGGIVTGIYTTN 119
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDKPGVISWDE 318
SPEAC + S I VVE+ KQL+KI+++ + P LKA+V Y+ P + +
Sbjct: 120 SPEACHYIAHDSKTYIMVVENQKQLDKIMQIWNRLPHLKAVVLYKDSIAERHPNLYTMAR 179
Query: 319 LMELGR-AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
L+ELG P + L V+ + N C L+YTSGT G K MLSHDNIT+ +A +
Sbjct: 180 LLELGAIERPVDVLHPVINSQKPNLCXVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAX 239
Query: 378 KLESAAL---SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ + S++S+LPLSHIAAQ++ + + ++FA+ +ALK
Sbjct: 240 GMQPTEIQQESIVSYLPLSHIAAQSM---TXIKWGXQVYFAEPDALK 283
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 101/192 (52%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ KL+ +++ + ++A S SL+ + ++ + +T RL +L+L+K+
Sbjct: 301 WEKIMEKLKDASAPSGFMEKKMLSWAMSLSLEKNLHGSNSDLKQLWT-RLADYLVLAKIH 359
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GL C+ SGAAP++TE +FL +I + E +GMSE H +S P ++ G
Sbjct: 360 SALGLSSCQKHFSGAAPLNTETLYFFLGRNIALYEAYGMSETTDPHCLSGPYIYRQHSCG 419
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ PG + K+VD D +GNGEIC RTV +L + + GF+ +
Sbjct: 420 KPAPGCRVKLVDKDTKGNGEICFW-----XRTVFIGYLNMEDRKKE-----GFDEEGXLH 469
Query: 242 S-DLGAIYAGGF 252
S DLG + GF
Sbjct: 470 SGDLGKLDNYGF 481
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 423 YKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDK 482
++A Q IDR N + + IQK LP DF I GELGPTMK+KR V+KKY++ +D
Sbjct: 581 HRAIQEGIDRVNSTATNRVHCIQKLIVLPRDFCISGGELGPTMKLKRLAVLKKYRNEVDS 640
Query: 483 F 483
+
Sbjct: 641 Y 641
>gi|194761050|ref|XP_001962745.1| GF14277 [Drosophila ananassae]
gi|190616442|gb|EDV31966.1| GF14277 [Drosophila ananassae]
Length = 681
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 137/226 (60%), Gaps = 11/226 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EY+ NV A L +GL SV I+ FN PEWF+++LG + AG AG+Y +NS EA
Sbjct: 73 REYQENVEQAALMLLSVGLTERSSVGILAFNCPEWFFAELGTLRAGAVVAGIYPSNSAEA 132
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-----PDKPGVISWDEL 319
H LVTS++++C+V+D +Q+ K+ +K + P L+A++Q G +PG SW +L
Sbjct: 133 VHHVLVTSESSVCIVDDAQQMAKVRAIKDRLPLLQAVIQIHGPFEAFVDQEPGYYSWQKL 192
Query: 320 MELGRAAPDESLDRVL---ETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E + P + + +L + NEC L++TSGT G K VMLSHDNI F+ +
Sbjct: 193 QE--KTYPSDLKEELLSRESRVCPNECAMLIFTSGTVGLPKAVMLSHDNIVFDTKAAAKM 250
Query: 377 FK-LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
K ++ S +S+LPLSH+AAQ DI+ ++ A + FADK+ALK
Sbjct: 251 LKDVQIGKESFVSYLPLSHVAAQIFDIFLGLSHAGCVTFADKDALK 296
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 106 PYTYRLVRWLILSKV----KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P Y ++ + S+V +Q MGLD CRV L+G AP S E+K +FL LDI + E +GMS
Sbjct: 360 PSIYGSAKYWVASRVIKPIRQMMGLDNCRVFLTGGAPTSDEMKEFFLGLDIALGECYGMS 419
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
E AGA T++ D L GR + G K++DPD G GEI ++
Sbjct: 420 ESAGAITLNV-DINNLYSAGRAVDGLNLKVLDPDCNGQGEIVMR 462
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A + I RAN +ISNAQ++QKF +P +FS+ TGELGPT+K++R V KY +I
Sbjct: 617 KLLEALEEGIKRANKNAISNAQRVQKFALIPHEFSLATGELGPTLKIRRNIVHAKYAQVI 676
Query: 481 DKFY 484
++ Y
Sbjct: 677 ERLY 680
>gi|340501571|gb|EGR28339.1| hypothetical protein IMG5_177990 [Ichthyophthirius multifiliis]
Length = 686
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 156/278 (56%), Gaps = 23/278 (8%)
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVD------PDE-----EGNGE---ICLKEYEANVR 212
+T+ P K G G IP T +I + P++ + +G+ + K+Y +
Sbjct: 42 YTLEMPIRMKKKGPGSEIPQTLIEIFENTLKQIPEKPALSVKKDGKWKTLTFKQYYEAAK 101
Query: 213 TVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTS 272
T KA + L + Y SV I+G+N+PEW S G+I+ G+YTTN EAC + S
Sbjct: 102 TFGKALISLKVSPYKSVNILGYNSPEWVISFYGSIFGFYLPVGVYTTNQAEACQYVAENS 161
Query: 273 DANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG----KPDKPGVISWDELMELGRAAPD 328
D + VVE+++ L+K LKV + P+LK I+ Y G K DK V+SW+E+ME+G+
Sbjct: 162 DCEVAVVENEQNLQKYLKVIDRLPQLKHIIVYSGDNFTKSDKVNVLSWNEIMEIGKKFKS 221
Query: 329 ESLDRVLETIATNE----CCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
E + +E ++ CCTLVYTSGT G K VMLSHDN T+ + +++ + +++
Sbjct: 222 EKAEDDIENRMKSQKPGNCCTLVYTSGTTGMPKGVMLSHDNYTWTSQAVLKQYDIKTQGN 281
Query: 385 S-VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+IS+LPLSH+AAQ +DI + +FA+ AL+
Sbjct: 282 DRIISYLPLSHVAAQNIDIVGCILSGCHTYFAEPTALQ 319
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 14/150 (9%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ +K I+ +AK + + +N + P+ + + + L+ V+
Sbjct: 341 WEKIEEKMKEVASSNGWLKTQISTWAKGIGI---LGAQSRNQNLPFGFGIAKSLVFDNVR 397
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL---- 177
+A+GL + GAAP+S +++YFLSL++ + +GMSE AG +S ++ +
Sbjct: 398 KALGLQEATHLMYGAAPLSPTIRQYFLSLNMYLISAYGMSESAGPQCLSDIKNYDVFDSN 457
Query: 178 --DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
G +I GT I PD++GNGEIC +
Sbjct: 458 FYASTGASIQGTNLIIAQPDKDGNGEICYR 487
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV KA Q IDR N + IS AQ+IQKF L DF+I +G+L PT+K+KR V KKY+ II
Sbjct: 618 KVMKAIQQGIDRTNQQVISKAQRIQKFAVLEGDFTIQSGDLTPTLKLKRNVVSKKYEGII 677
Query: 481 DKFY 484
++ Y
Sbjct: 678 EQLY 681
>gi|395851104|ref|XP_003798106.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG2-like [Otolemur garnettii]
Length = 697
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 137/221 (61%), Gaps = 5/221 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AKAFLKLGL+R+H V I+G N+ EW + +GAI AGGF+ G+ T ++P++C
Sbjct: 111 EYYEECRRAAKAFLKLGLQRFHGVGIMGLNSEEWVIASIGAIMAGGFSVGILTNSTPKSC 170
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDELMELG 323
++ +I VV++D+QL+KIL+++ LKAIVQY+ + ++ + SW ++L
Sbjct: 171 QMIAENAEMDIFVVDNDRQLQKILQIQGSLKHLKAIVQYKEVIQTEQTNLYSWQSFLDLA 230
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY--FKLES 381
D LD+V+++ N+CCTLV++ G K VMLSHDNIT+ +Q +K
Sbjct: 231 EGVSDYRLDQVIDSQKPNQCCTLVFSLSATGPPKAVMLSHDNITWTTEATVQSLCYKCPP 290
Query: 382 AALSV-ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V +++LPL+++ AQ D++ + VA L+FA + +K
Sbjct: 291 EGQEVLVNYLPLAYMGAQIFDMWVTIEVAGALYFAQPDGVK 331
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 68/132 (51%)
Query: 73 KLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVS 132
+L +T ++R +A L+ + ++ P + L + L + ++ GL+ C+
Sbjct: 364 QLDSTTLRRKFDKWAMMLGLRTNQKRMFGHIDLPLCFGLAKSLTFNPARKLFGLEHCQQF 423
Query: 133 LSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIV 192
+ + +FLSL+IPI E +G++EC G H++S+ F+L G+ +P T++
Sbjct: 424 FNMGPGLPRATLDFFLSLNIPIFEFYGLTECTGIHSISSHKAFRLLSSGKGLPRAHTRVH 483
Query: 193 DPDEEGNGEICL 204
DEEG G I +
Sbjct: 484 KEDEEGVGNISI 495
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 33/55 (60%)
Query: 430 IDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
ID N ++ S + KI K+ L DFSI GELG T KVKR V K YQ I+ FY
Sbjct: 640 IDAINAEAQSESTKIVKWTILNTDFSIAGGELGETTKVKRAIVAKIYQEEIENFY 694
>gi|303283612|ref|XP_003061097.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457448|gb|EEH54747.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 651
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 138/234 (58%), Gaps = 17/234 (7%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
K++ + R AK+F+ LGL R+ SV I+GFNAPEW S++ AI AGGFAAG+YTTN P A
Sbjct: 57 KQFYDDTRAAAKSFIALGLGRFESVSILGFNAPEWHLSNMAAIAAGGFAAGIYTTNEPPA 116
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG----------VI 314
C + + A + VVE KQL+KIL ++ PKL AIV Y G DK V
Sbjct: 117 CKYIVDHCKARVIVVEGQKQLDKILAIRGSLPKLAAIVVYGGDFDKSANDGVGAGQAKVY 176
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
SW++ M LG + LD + CCTL+YTSGT G K VM+SHDN+TF I
Sbjct: 177 SWNDFMALGAGVAEADLDARVADQKPGHCCTLIYTSGTTGNPKAVMISHDNVTFTTRANI 236
Query: 375 QYF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAAT------LWFADKNALK 421
++ S L V+S+LPLSHIAAQ VDI+S M A + FA +A+K
Sbjct: 237 EHHPDFVSGPLRVVSYLPLSHIAAQIVDIHSPMAYLADHGLPSEIHFAAPDAMK 290
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKST-SLQHYMAYLEKNVSEPYTYRLVRWLILSKV 120
W+K +Q G +K+ I+ + K T H A + S P+ L R L+ +K
Sbjct: 312 WEKFAEAIQAKGREIKGLKKKISAWGKGTLGKAHAAAQVNSKGSAPFFTFLARKLVSAKA 371
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
K A+GL+ R+ LSGAAPI+ + YF SL + I EV+GMSE G T F
Sbjct: 372 KAAIGLEEARLCLSGAAPITKDTLDYFGSLGVHIMEVYGMSENTGPQTCGQNAHFLAGTC 431
Query: 181 GRTIPGTQTKIV-DP--DEEGNGEICLK 205
GRT+PG + I DP D+ GE+C +
Sbjct: 432 GRTLPGVEINIEHDPKRDKPNEGEVCFR 459
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ I N +++SNAQKIQKF L DFS+ GEL T K+KR VV+KY +I+K Y
Sbjct: 594 EGGIKTYNKEAVSNAQKIQKFTILDVDFSVDGGELTSTQKLKRNVVVEKYSGVIEKMY 651
>gi|19921316|ref|NP_609696.1| CG4500 [Drosophila melanogaster]
gi|74947352|sp|Q9V3U0.1|BGML_DROME RecName: Full=Long-chain-fatty-acid--CoA ligase bubblegum-like
gi|7298132|gb|AAF53370.1| CG4500 [Drosophila melanogaster]
gi|60677777|gb|AAX33395.1| RE63419p [Drosophila melanogaster]
gi|220952172|gb|ACL88629.1| CG4500-PA [synthetic construct]
Length = 681
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 137/233 (58%), Gaps = 9/233 (3%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
+G + EY+ V A L +G+E SV I+ FN PEWF+++ GA+ AG AG+
Sbjct: 65 DGWTTLTFGEYQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGV 124
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD-----KP 311
Y +NS EA H L T ++++CVV+D +Q+ K+ +K + P+LKA++Q G + +P
Sbjct: 125 YPSNSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEP 184
Query: 312 GVISWDELME--LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
G SW +L E +E L R I NEC L++TSGT G K VMLSHDN+ F+
Sbjct: 185 GYFSWQKLQEQTFSSELKEELLARE-SRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFD 243
Query: 370 AACIIQYFK-LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + ++ S +S+LPLSH+AAQ D++ ++ A + FADK+ALK
Sbjct: 244 TKSAAAHMQDIQVGKESFVSYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALK 296
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 114 WL---ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
WL ++ +++ +G+D CRV +G AP S ELK++FL LDI + E +GMSE +GA T++
Sbjct: 369 WLACRVVKPIREMIGVDNCRVFFTGGAPTSEELKQFFLGLDIALGECYGMSETSGAITLN 428
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
D L G+ G KI +PD G GEI ++
Sbjct: 429 V-DISNLYSAGQACEGVTLKIHEPDCNGQGEILMR 462
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 408 VAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKV 467
+AATL K K+ +A + I RAN +ISNAQK+QKF + +FS+ TGELGPT+K+
Sbjct: 606 LAATLEITAKP--KLLEAIEEGIKRANKYAISNAQKVQKFALIAHEFSVATGELGPTLKI 663
Query: 468 KRPFVVKKYQSIIDKFY 484
+R V KY +I++ Y
Sbjct: 664 RRNIVHAKYAKVIERLY 680
>gi|195433531|ref|XP_002064764.1| GK15028 [Drosophila willistoni]
gi|194160849|gb|EDW75750.1| GK15028 [Drosophila willistoni]
Length = 691
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 137/235 (58%), Gaps = 11/235 (4%)
Query: 196 EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
++G + K+Y+ V VA + GLE S+ ++ FN PEWF+++ GA+ AGG AG
Sbjct: 74 DQGWTTLSYKDYQKQVEQVALLLIDAGLEERSSLGVLAFNCPEWFFAEFGALRAGGVVAG 133
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD-----K 310
+Y +NS EA H L TS+A +C+V+D +Q+ K+ +K P+LK ++Q G + +
Sbjct: 134 IYPSNSAEAVRHVLDTSEATVCMVDDAQQMAKLRAIKESLPRLKTVIQLHGPFESFVNQE 193
Query: 311 PGVISWDELMELGRAAPDESLDRVL---ETIATNECCTLVYTSGTEGASKPVMLSHDNIT 367
G SW +LME + P + +L I NEC L++TSGT G K VMLSHD+I
Sbjct: 194 SGYYSWQKLME--KVYPISLKEELLCRENRICANECAMLIFTSGTVGLPKAVMLSHDSIV 251
Query: 368 FNAACI-IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
F+ I + +E ++S+LPLSHIAAQ DI+ M + FADK+ALK
Sbjct: 252 FDTKAIDLSMRNIELGNERMVSYLPLSHIAAQIFDIFLAMQHGGCVTFADKDALK 306
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 81 RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWL---ILSKVKQAMGLDRCRVSLSGAA 137
R I A+ QH M + Y+ WL ++ ++Q +GLD C+ L+G A
Sbjct: 347 RLILAKARQVVAQHQMTSILGEKHSIYSSSKY-WLASRVVRPIRQMLGLDSCKTFLTGGA 405
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEE 197
P+S E+K +FL LD+P+ E +GMSE GA T++ + L G+ I G + +I +PD
Sbjct: 406 PVSDEMKNFFLGLDMPLGECYGMSETGGAITLNV-EITNLFSSGQPICGLEVEIKEPDAN 464
Query: 198 GNGEICLK 205
G+GEIC++
Sbjct: 465 GHGEICMR 472
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A +A I RAN +ISNAQK+QKF +P +FS+ TGELGPT+K++R V KY +I
Sbjct: 627 KLLEAIEAGIKRANKNAISNAQKVQKFALIPHEFSLATGELGPTLKIRRNIVHAKYAQVI 686
Query: 481 DKFY 484
++ Y
Sbjct: 687 ERLY 690
>gi|195338369|ref|XP_002035797.1| GM15459 [Drosophila sechellia]
gi|194129677|gb|EDW51720.1| GM15459 [Drosophila sechellia]
Length = 681
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 134/224 (59%), Gaps = 9/224 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY+ V A L +G+E SV I+ FN PEWF+++ GA+ AG AG+Y +NS EA
Sbjct: 74 EYQERVEQAALILLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAV 133
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD-----KPGVISWDELM 320
H L T ++++CVV+D +Q+ K+ +K + P+LKA++Q G + +PG SW +L
Sbjct: 134 HHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQ 193
Query: 321 E--LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
E +E L R I NEC L++TSGT G K VMLSHDN+ F+ + +
Sbjct: 194 EQTFSSELKEELLARE-SRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSASAHMQ 252
Query: 379 -LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ S +S+LPLSH+AAQ D++ ++ A + FADK+ALK
Sbjct: 253 DIQVGKESFVSYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALK 296
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 114 WL---ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
WL ++ +++ +GLD CRV +G AP S ELK++FL LDI + E +GMSE +GA T++
Sbjct: 369 WLASRVVKPIREMIGLDNCRVFFTGGAPTSEELKQFFLGLDIALGECYGMSETSGAITLN 428
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
D L G+ G KI +PD G GEI ++
Sbjct: 429 V-DISNLYSAGQACEGVTLKIHEPDCNGQGEILMR 462
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A + I RAN +ISNAQK+QKF + +FS+ TGELGPT+K++R V KY +I
Sbjct: 617 KLLEAIEEGIKRANKYAISNAQKVQKFALIAHEFSVATGELGPTLKIRRNIVHAKYAKVI 676
Query: 481 DKFY 484
++ Y
Sbjct: 677 ERLY 680
>gi|320166630|gb|EFW43529.1| long-chain-fatty-acid-CoA ligase ACSBG2 [Capsaspora owczarzaki ATCC
30864]
Length = 648
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 136/233 (58%), Gaps = 6/233 (2%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P + G ++ V VAK+ +KLG++++ V I+GFN+PEWF +D+ ++YAG
Sbjct: 54 PGQSGFDSFTFTQFREQVYKVAKSIIKLGVQKWERVGILGFNSPEWFIADVASVYAGCIP 113
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG- 312
G+YTTN PEAC L + + V+E+ QL KI +V +Q P LK +V + G P K
Sbjct: 114 FGIYTTNGPEACQFVLEFTKCPLLVLENAVQLRKIREVASQLPLLKTVVVWSGTPVKEAS 173
Query: 313 ----VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
V+SW E +LG PD+++ IA C L++TSGT G K VM+SHDN+T+
Sbjct: 174 DPWQVLSWQEFRDLGSDLPDQAVSERTLDIAPGNCACLIFTSGTTGPPKAVMVSHDNLTW 233
Query: 369 NAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + + S +S+LPLSHIAA+ VD+ + + +++FA +ALK
Sbjct: 234 VTSVVRAALAADHND-SWVSYLPLSHIAAKMVDLMACVVEGTSVYFAQPDALK 285
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ KLQ +G+K+ I +AK +A LE S+P + L L+ KVK
Sbjct: 307 WEKMMEKLQAIGAANSGIKKKIGTWAKKKGAAGSLAKLEGK-SKPSGWSLANSLVFKKVK 365
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+GLDR RV+L GAAP+S + YF+SLDI + EVFGMSE G T S FK+ G
Sbjct: 366 AGLGLDRMRVALVGAAPMSRDCTLYFMSLDISVFEVFGMSESTGCVTFSINHQFKIGACG 425
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
I G KI PD +GNGEI K
Sbjct: 426 SPIEGVDLKINRPDSDGNGEITFK 449
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV A A R N K+IS+A IQK+ LP + SI ELGPT+K+KR + KY S+I
Sbjct: 583 KVIAAIDEAFVRVNKKAISHAHTIQKWVILPNELSISGNELGPTLKMKRRTIATKYDSLI 642
Query: 481 DKFY 484
+ Y
Sbjct: 643 ETLY 646
>gi|291410723|ref|XP_002721638.1| PREDICTED: lipidosin [Oryctolagus cuniculus]
Length = 720
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 135/222 (60%), Gaps = 11/222 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAG-GFAAGMYTTNSPEA 264
+Y R AK+FLK+ + +G AP+WF++ + ++AG G G+YTT+SPEA
Sbjct: 137 QYYLIARKAAKSFLKV-----RAPGRLGPAAPKWFFASVATVFAGDGIVTGIYTTSSPEA 191
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP--GVISWDELMEL 322
C + S AN+ VV+ KQLEKILK+ P LKA+V Y P KP V + +E MEL
Sbjct: 192 CQYIARDSRANVIVVDTQKQLEKILKIWKNLPHLKAVVMYREPPPKPMANVYTMEEFMEL 251
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G P+E+LD ++ N+CC LVYTSGT G K VMLS DNIT+ A Q ++ A
Sbjct: 252 GEDVPEEALDAIIAAQQPNQCCALVYTSGTTGNPKGVMLSQDNITWTARYGSQAGDIQPA 311
Query: 383 ALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 312 EVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 353
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 375 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPHSDL-KPFTSRLADYLVLAKVR 433
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ S GAAP++ E + +FL L+I + +G+SE G H +S+P +++L G
Sbjct: 434 QALGFAKCQKSFYGAAPMTAETQHFFLGLNIRLYAGYGLSETTGPHFMSSPYNYRLYSSG 493
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V D EG GEICL RT+ +L + + ++ +A W +
Sbjct: 494 KVVPGCRVKLVGEDAEGIGEICLWG-----RTIFMGYLNMEDKTSEAI-----DAEGWLH 543
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 544 TGDAGRLDADGF 555
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 653 VYQAIEEGIQRVNSNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEKYKDIID 712
Query: 482 KFY 484
FY
Sbjct: 713 SFY 715
>gi|332252706|ref|XP_003275497.1| PREDICTED: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase
ACSBG1 [Nomascus leucogenys]
Length = 732
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 113/167 (67%), Gaps = 2/167 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGL++ HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLKQAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ VV+ KQLEKILK+ Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIVVDTQKQLEKILKIWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI 366
MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DN+
Sbjct: 253 MELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNV 299
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 112/192 (58%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 387 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 445
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E +R+FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 446 QALGFAKCQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 505
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + Y ++ + W +
Sbjct: 506 KVVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTYEAI-----DEEGWLH 555
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 556 TGDAGRLDADGF 567
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 391 PLSHIAAQTVDIYSVMTVAATLW--FADKNALKVYKATQAAIDRANLKSISNAQKIQKFE 448
P ++ Q V+ + AT+ K VY+A + I R N+ + + IQK+
Sbjct: 632 PTDNLTEQAVEFCQRVGSRATMVSEIVGKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWA 691
Query: 449 FLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
L DFSI GELGPTMK+KR V++KY+ IID FY
Sbjct: 692 ILERDFSISGGELGPTMKLKRLTVLEKYKDIIDSFY 727
>gi|149917269|ref|ZP_01905768.1| putative long-chain-fatty-acid--CoA ligase [Plesiocystis pacifica
SIR-1]
gi|149821876|gb|EDM81270.1| putative long-chain-fatty-acid--CoA ligase [Plesiocystis pacifica
SIR-1]
Length = 589
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 125/216 (57%), Gaps = 1/216 (0%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E K+Y A + AK + LGLE V +IGFN +W ++ +I+AGG G+YTT+
Sbjct: 34 ETSWKDYRAEIHRAAKGLIALGLEPAKGVSLIGFNCRQWMIGNIASIHAGGVPVGIYTTS 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E C + SD+NI +VE+ +QL K L+++ + P LKAIV G+ D V SW L+
Sbjct: 94 SAEQCHYIASHSDSNIAIVENAEQLAKFLEIRERLPDLKAIVMMNGEHDDADVHSWSALL 153
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
E G + +LD + + CTL+YTSGT G K VMLSHDN+++ +A ++E
Sbjct: 154 EKGDSLEQSALDERMSAQKPEDICTLIYTSGTTGNPKGVMLSHDNLSWTSASAASTMEIE 213
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
A +S+LPLSHIA Q V +Y M + FA+
Sbjct: 214 EGA-QFLSYLPLSHIAEQVVSMYVPMQIGGCSNFAE 248
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 16/159 (10%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+ + +G+K+ IA +A+ L+ A E+ + P Y L L+ SKV+
Sbjct: 272 WEKIQAKMMEAGAKNSGLKKKIAAWARGVGLKAAAAK-ERGEAPPLAYGLADKLVFSKVR 330
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+ +GLD R++++ AAPI+ E +F SL + I EV+GMSEC G T+S PD F++ VG
Sbjct: 331 ERLGLDNSRLNVTSAAPIAKETLDFFASLGVLINEVYGMSECTGPATISTPDKFRVGWVG 390
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLK 220
+PG + KI + +GE+C++ R V K + K
Sbjct: 391 WALPGAEVKI-----DHDGEVCMRG-----RNVFKGYYK 419
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 438 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++ Q+I+K LP D SI GEL PTMK+KR + KY++ I+ FY
Sbjct: 542 LARVQQIKKITILPKDLSIEGGELTPTMKIKRRIIRDKYEAQIEAFY 588
>gi|198473231|ref|XP_001356214.2| GA18224 [Drosophila pseudoobscura pseudoobscura]
gi|198139363|gb|EAL33274.2| GA18224 [Drosophila pseudoobscura pseudoobscura]
Length = 689
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 135/234 (57%), Gaps = 9/234 (3%)
Query: 196 EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
E+G + +Y+ V A + +GLE S+ ++ FN PEWF+++LGA+ AG AG
Sbjct: 72 EDGWTTLTYADYQRRVEQTALMLINVGLEERSSLGVLAFNCPEWFFAELGALRAGAVVAG 131
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ----YEGKPDK- 310
+Y +NS EA H L TS+A +CVV+D +Q+ K+ +K P+LK ++Q YE DK
Sbjct: 132 IYPSNSAEAVRHVLATSEATVCVVDDSQQMAKLRAIKDTLPRLKTVIQLHGPYEAFVDKE 191
Query: 311 PGVISWDELME--LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
G SW +L E E LDR A NEC L++TSGT G K VML+HD+I F
Sbjct: 192 EGYYSWKQLEEKTYSNDLKKELLDRESRVYA-NECAMLIFTSGTVGLPKAVMLTHDSIVF 250
Query: 369 NAACIIQYFK-LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
NA K ++ ++SFLPLSHIAAQ D++ + + FADK+ALK
Sbjct: 251 NAKSASASMKDVQDGEERMVSFLPLSHIAAQIFDVFLGLEHGGCVTFADKDALK 304
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 81 RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSK----VKQAMGLDRCRVSLSGA 136
R + + A++ ++ +A + +P Y + ++ + S+ ++Q MGLD CR L+G
Sbjct: 345 RLLLSKARAAVAEYQLAVMAGE--KPSIYAITKYWLASRMIRPIRQMMGLDHCRSFLTGG 402
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
AP S E+K +FL LDI + E +GMSE GA T++ + L G+ I G K+ +PD
Sbjct: 403 APTSDEMKNFFLGLDIALGECYGMSESGGAITLNT-EISNLFSSGQPIAGVAVKVQEPDA 461
Query: 197 EGNGEICLK 205
G GEI ++
Sbjct: 462 SGKGEIIMR 470
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A +A I RAN SIS+AQ++QKF +P +FS+ TGELGPT+K++R V KY II
Sbjct: 625 KLLEAIEAGIKRANKNSISSAQRVQKFALMPHEFSLATGELGPTLKIRRNIVHAKYAQII 684
Query: 481 DKFYD 485
++ Y+
Sbjct: 685 ERLYN 689
>gi|354479303|ref|XP_003501851.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like
[Cricetulus griseus]
Length = 618
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 135/221 (61%), Gaps = 5/221 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AKAFLK+GLER+H V I+G N+ EW +++GAI AGG + G+ TNSP+AC
Sbjct: 68 EYYEACRRAAKAFLKVGLERFHGVGIMGSNSTEWVIANIGAIMAGGISVGILCTNSPKAC 127
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELG 323
TS+ +I VV++++QL+K+ +++ LKAI+QY + + +P + SW ++L
Sbjct: 128 QVIAETSEMDIFVVDNERQLQKVNQIQGYLKHLKAIIQYREDIQEVQPNLYSWKGFLDLA 187
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE--- 380
DE LD+++++ N+CC LVY G G K MLSHDNIT+ A +Q + +
Sbjct: 188 DGISDEKLDQIIDSQKPNQCCALVYKQGISGPPKATMLSHDNITWTTAATVQSLEYKCPP 247
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ ++S+LPL Q +D++ ++VA T++F A K
Sbjct: 248 NGQEVLVSYLPLCFAGTQILDVWVAISVAGTVYFPSPEAGK 288
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%)
Query: 103 VSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSE 162
+ +P Y L + L ++ +GL+ C+ L+ + +FLSL+IPI +++G++E
Sbjct: 312 LHQPLCYGLAKKLTFDPARKFLGLNHCQQFLNLGLGLPRNTLDFFLSLNIPIFDMYGLTE 371
Query: 163 CAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
C+G H +S+ F+ G+ +P TK+ + E G +C+
Sbjct: 372 CSGLHALSSHQAFRQLSCGKALPSALTKVEKENRENVGNLCV 413
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
D++ L V + I N ++ S A KI K+ L DFS+ GELGP K+ R V K
Sbjct: 545 DRDPL-VTEFISQGIQEVNAEAPSEAAKIIKWVILDNDFSVGGGELGPMTKLNRTAVAKI 603
Query: 476 YQSIIDKFYD 485
YQ I KFY+
Sbjct: 604 YQEDIQKFYE 613
>gi|156357290|ref|XP_001624154.1| predicted protein [Nematostella vectensis]
gi|156210912|gb|EDO32054.1| predicted protein [Nematostella vectensis]
Length = 555
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 125/219 (57%), Gaps = 19/219 (8%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSD-LGAIYAGGFAAGMYTTNSPEA 264
EY VR AK+F+ ER EW + L I GFA G+YTTNSPEA
Sbjct: 16 EYYEEVRIAAKSFI----ER------------EWGRNGRLHCILIRGFAVGIYTTNSPEA 59
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD--KPGVISWDELMEL 322
C +AN+ VVE+ QL KILKV + P LKA+VQY G+ + V +W++ +EL
Sbjct: 60 CHFVADNCNANVIVVENKAQLSKILKVWDRLPHLKAVVQYTGEVEGKHENVYNWNQFLEL 119
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G+ D L + + N CCTL+YTSGT GA K VM+SHDNIT+ A + + +
Sbjct: 120 GKTVADRVLQERMSQLVANRCCTLIYTSGTTGAPKGVMISHDNITWTAQAALNHVQAGKR 179
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLSH+AAQ DIY M T+WFA +ALK
Sbjct: 180 EEHIVSYLPLSHVAAQMTDIYMSMYCCGTVWFAQPDALK 218
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 12/159 (7%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+ TG KR IA++AK +LQ M +E+ S P+ + + IL K+K
Sbjct: 240 WEKIMEKMLEVGATVTGPKRRIADWAKGKALQGNMN-IEQGRSTPFGWTIAT-GILKKIK 297
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
++GLDRC AAP++ E RYF S++IP+ E++GMSEC+G T+S P G
Sbjct: 298 VSLGLDRCWGQFVAAAPVTMETLRYFQSINIPLYELYGMSECSGPLTISIPGHVLSGSCG 357
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLK 220
+ GT+ KI PDE+GNGE+C++ R V FL
Sbjct: 358 IKMEGTEMKIDKPDEDGNGELCMRG-----RNVFMGFLN 391
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 407 TVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELG 462
TV+ L D+N V KA QA +DRAN ++IS AQK+QK+ L DF+I GELG
Sbjct: 502 TVSEILKTKDEN---VMKAIQAGVDRANEEAISRAQKVQKWCILENDFTIHGGELG 554
>gi|300175499|emb|CBK20810.2| unnamed protein product [Blastocystis hominis]
Length = 734
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 136/225 (60%), Gaps = 10/225 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y N A+A + +GL+ + +V +IGFNAPE+ ++ G I AGG A G+Y TN P+AC
Sbjct: 153 QYYENSHRFARALISIGLKPFDTVSVIGFNAPEYMFAVHGCIEAGGVATGIYATNGPDAC 212
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK------PDKPGVI---SW 316
+ + ++ + VV+ QL+K+L+++A+ P L+ IV Y D+ GV +W
Sbjct: 213 FYVMNHCNSAVVVVDGQSQLKKMLEIRARLPNLRMIVVYNADDSVQLPQDEEGVAKVRNW 272
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
+ +E+G D+ +DR + +C +L+YTSGT G K VM+S DNI F I +
Sbjct: 273 VDFLEMGSEEADKEIDRRVANQKPGQCVSLIYTSGTTGNPKAVMISDDNIVFVIRVIQKD 332
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
F + + ++SFLPLSHIAAQ +DI++ M + TL+FA +ALK
Sbjct: 333 FNIGTQD-RLVSFLPLSHIAAQMIDIFAGMVLGFTLYFARPDALK 376
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 70 VTYKL-QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDR 128
+T KL + + KR ++N+A+ ++ + T+ + IL+KV+ ++GL
Sbjct: 405 ITAKLAEASCFKRMLSNFARKRGTRYCNNLQVGTKKQRITFFNLAKKILTKVQTSLGLSE 464
Query: 129 CRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQ 188
R+ S AAPI ++ S +P+ E+FGMSE +G T +K+ G+ + G+
Sbjct: 465 ARLMFSAAAPIDLSTVQFLASFGLPLFEIFGMSESSGPTTFHTLGQWKMATAGKAMRGSI 524
Query: 189 TKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIY 248
K V G+ EI + R V +LK+ E + GF D G++
Sbjct: 525 VKTV----PGSNEIIVSG-----RHVFMGYLKMPEETLRVIDDDGF----LHSGDCGSVD 571
Query: 249 AGGF 252
A GF
Sbjct: 572 ADGF 575
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 430 IDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
I + N+ + SNAQKIQKF L DFS+ TGEL PT+K+KR ++ + I+K Y
Sbjct: 679 IQQYNMSAFSNAQKIQKFSILKRDFSMNTGELTPTLKMKRGYISSVFSEEIEKMY 733
>gi|195473967|ref|XP_002089263.1| GE19020 [Drosophila yakuba]
gi|194175364|gb|EDW88975.1| GE19020 [Drosophila yakuba]
Length = 681
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 137/232 (59%), Gaps = 7/232 (3%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
+G I EY+ V A L +G+E SV I+ FN PEWF+++LGA+ AG AG+
Sbjct: 65 DGWTTITYGEYQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAELGALRAGAVVAGI 124
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD-----KP 311
Y +NS EA H L T ++++CVV++ +Q+ K+ +K + P LKA++Q G + +P
Sbjct: 125 YPSNSAEAVHHVLATGESSVCVVDNAQQMAKLRSIKERLPLLKAVIQLHGPFEAFVDHEP 184
Query: 312 GVISWDELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
G SW +L E ++ E L I NEC L++TSGT G K VMLSHD++ F+
Sbjct: 185 GYFSWQKLQERTFSSELKEELVAREGRIRANECAMLIFTSGTVGMPKAVMLSHDSLVFDT 244
Query: 371 ACIIQYFK-LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + ++ S +S+LPLSH+AAQ D++ ++ A + FADK+ALK
Sbjct: 245 KSAAAHMQDIQVGKESFVSYLPLSHVAAQIFDVFLALSHAGCVTFADKDALK 296
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
Query: 106 PYTYRLVRWLILSKV----KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P Y ++ + S+V ++ +GLD CRV +G AP S ELK++FL LDI + E +GMS
Sbjct: 360 PSIYSSTKYWLASRVVKPIREMIGLDNCRVFFTGGAPTSEELKQFFLGLDIALGECYGMS 419
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKL 221
E GA T++ L G+ G KI +PD G GEI ++ RT+ +L L
Sbjct: 420 ESGGAITLNVQIS-NLYSAGQACEGVTLKIHEPDCNGQGEILMRG-----RTMFMGYLGL 473
Query: 222 GLERYHSVCIIGFNAPEWFYS-DLG-------AIYAGGFAAGMYTT---NSPEACLHCLV 270
+ ++ G W +S DLG I +G + T N P + L+
Sbjct: 474 PEKTEETIKEDG-----WLHSGDLGYFDPKGNLIISGRLKELIITAGGENIPPVHIEELI 528
Query: 271 TSD----ANICVVEDDKQ-LEKILKVKAQC 295
+ +N+ ++ D ++ L +L +K +C
Sbjct: 529 KKELPCVSNVILIGDHRKYLTVLLSLKTKC 558
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A + I RAN +ISNAQK+QKF + +FS+ TGELGPT+K++R V KY +I
Sbjct: 617 KLLEAIEEGIKRANKYAISNAQKVQKFALIAHEFSVATGELGPTLKIRRNIVHAKYDKVI 676
Query: 481 DKFY 484
++ Y
Sbjct: 677 ERLY 680
>gi|195164832|ref|XP_002023250.1| GL21256 [Drosophila persimilis]
gi|194105335|gb|EDW27378.1| GL21256 [Drosophila persimilis]
Length = 689
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 136/238 (57%), Gaps = 11/238 (4%)
Query: 194 PDEEGNGEICLK--EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGG 251
P G+G L +Y+ V A + +GLE S+ ++ FN PEWF+++LGA+ AG
Sbjct: 68 PGTGGDGWTTLTYADYQRRVEQTALMLINVGLEERSSLGVLAFNCPEWFFAELGALRAGA 127
Query: 252 FAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ----YEGK 307
AG+Y +NS EA H L TS+A +CVV+D +Q+ K+ +K P+LK ++Q YE
Sbjct: 128 VVAGIYPSNSAEAVRHVLATSEATVCVVDDSQQMAKLRAIKDTLPRLKTVIQLHGPYEAF 187
Query: 308 PDK-PGVISWDELME--LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHD 364
DK G SW +L E E L+R A NEC L++TSGT G K VML+HD
Sbjct: 188 VDKEEGYYSWKQLEEKTYSNDLKKELLERESRVYA-NECAMLIFTSGTVGLPKAVMLTHD 246
Query: 365 NITFNAACIIQYFK-LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+I FNA K ++ ++SFLPLSHIAAQ D++ + + FADK+ALK
Sbjct: 247 SIVFNAKSASASMKDVQDGEERMVSFLPLSHIAAQIFDVFLGLEHGGCVTFADKDALK 304
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 184/424 (43%), Gaps = 98/424 (23%)
Query: 81 RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSK----VKQAMGLDRCRVSLSGA 136
R + + A++ ++ +A + +P Y + ++ + S+ ++Q MGLD CR L+G
Sbjct: 345 RLLLSKARAAVAEYQLAVMAGE--KPSIYAITKYWLASRMIRPIRQMMGLDHCRSFLTGG 402
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
AP S E+K +FL LDI + E +GMSE GA T++ + L G+ I G K+ +PD
Sbjct: 403 APTSDEMKNFFLGLDIALGECYGMSESGGAITLNT-EISNLFSSGQPIAGVAVKVQEPDA 461
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLG-------AIY 248
G GEI ++ R+ +L + ++ NA W S DLG +
Sbjct: 462 SGKGEIIMRG-----RSTFMGYLGQPEKTKETI-----NADGWLLSGDLGYFDQHGNLVI 511
Query: 249 AGGFAAGMYTT---NSPEACLHCLVTSD----ANICVVEDDKQLEKILKVKAQCPKLKAI 301
+G + T N P + L+ + +N +V D ++ L +
Sbjct: 512 SGRLKELIITAGGENIPPVHIEELIKKELPCVSNALLVGDHRKY------------LTVL 559
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ + K D I D+L E ETI + L T +E S P L
Sbjct: 560 LSLKAKSDPTTGIPLDDLRE--------------ETIEWLQEVGLNQTRLSELLSIPADL 605
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
N T AA SAAL + T + + + A + A+KN++
Sbjct: 606 QLPNDT--AAM--------SAALQI------------TAEPKLLEAIEAGIKRANKNSI- 642
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
S+AQ++QKF +P +FS+ TGELGPT+K++R V KY II+
Sbjct: 643 -----------------SSAQRVQKFALMPHEFSLATGELGPTLKIRRNIVHAKYAQIIE 685
Query: 482 KFYD 485
+ Y+
Sbjct: 686 RLYN 689
>gi|194860220|ref|XP_001969535.1| GG23907 [Drosophila erecta]
gi|190661402|gb|EDV58594.1| GG23907 [Drosophila erecta]
Length = 681
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 7/223 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY V A L +G+E SV I+ FN PEWF+++ GA+ G AG+Y +NS EA
Sbjct: 74 EYLERVEQAALMLLSVGVEERSSVAILAFNCPEWFFAEFGALRTGAVVAGVYPSNSAEAV 133
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD-----KPGVISWDELM 320
H L T ++++CVV+D +Q+ K+ +K + P+LKA++Q G + +PG SW +L
Sbjct: 134 HHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQ 193
Query: 321 ELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK- 378
E ++ E L I NEC L++TSGT G K VMLSHDN+ F+ + +
Sbjct: 194 ERTFSSELKEELVARESRIRANECAMLIFTSGTVGLPKAVMLSHDNLIFDTKSASAHMQD 253
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ S +S+LPLSH+AAQ D++ ++ A + FADK+ALK
Sbjct: 254 IQIGKKSFVSYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALK 296
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 15/138 (10%)
Query: 114 WL---ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
WL ++ +++ +GLD CRV +G AP S ELK++FL LDI + E +GMSE +GA T++
Sbjct: 369 WLASRVVKPIREMIGLDNCRVFFTGGAPTSKELKQFFLGLDIALGECYGMSESSGAITLN 428
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVC 230
D L G+ G KI +PD G GEI ++ R+V +L L + +V
Sbjct: 429 V-DISNLYSAGQACEGVILKINEPDCNGQGEILMRG-----RSVFMGYLGLPEKTEEAVK 482
Query: 231 IIGFNAPEWFYS-DLGAI 247
G W +S DLG I
Sbjct: 483 EDG-----WLHSGDLGYI 495
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A + I RAN +ISNAQK+QKF + +FS+ TGELGPT+K++R V KY ++I
Sbjct: 617 KLLEAIEEGIKRANKYAISNAQKVQKFALIAHEFSVATGELGPTLKIRRNIVHAKYANVI 676
Query: 481 DKFY 484
++ Y
Sbjct: 677 ERLY 680
>gi|146170344|ref|XP_001017489.2| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|146145030|gb|EAR97244.2| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 692
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 149/279 (53%), Gaps = 25/279 (8%)
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVD------PDE-----EGNGE---ICLKEYEANVR 212
+T+ P K G G P T ++ + PD + NG+ + K+Y +
Sbjct: 44 YTLELPIRVKKSGPGSEQPFTLVEMFERIVKQIPDSPALSVKKNGKWVTLTYKQYFEESK 103
Query: 213 TVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTS 272
KA + LG+ Y SV IIGFN+PEW S G+I+ G+YTTN PEAC + S
Sbjct: 104 VFGKALISLGMTPYRSVNIIGFNSPEWVISFYGSIFGYYLPVGVYTTNGPEACQYVAENS 163
Query: 273 DANICVVEDDKQLEKILKVKAQCPKLKAIVQY----EGKPD--KPGVISWDELMELGRAA 326
D + +VE+ L+K LKV + P LK IV Y + P+ + V +WD+ M GR+
Sbjct: 164 DCEVVIVENQTHLDKYLKVLDKLPLLKYIVVYNDTIKNVPENCRVKVFTWDQFMSHGRSF 223
Query: 327 PDESLDRVLETIATNE----CCTLVYTSGTEGASKPVMLSHDNITFN-AACIIQYFKLES 381
E+ +LE + CCTLVYTSGT G K VMLSHDN T+ ACI +Y +
Sbjct: 224 KPENPADILENRMIKQRPGNCCTLVYTSGTTGMPKGVMLSHDNYTWTCKACIGKYGLAPN 283
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNAL 420
++S+LPLSH+AAQ +DI + A ++FAD +AL
Sbjct: 284 QQERLVSYLPLSHVAAQIIDIVGNIEGGAHMFFADPSAL 322
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 27/193 (13%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K++ +K IA +AK ++ A + N P+ + L + ++ + VK
Sbjct: 345 WEKIEEKMKALAASNGWLKTKIATWAKGMGVEGTFAEVH-NKKLPFGFGLAKKVVYNNVK 403
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF-KLDG- 179
+A+GLD+ R + GAAP+S ++ YFLSL++ + +GMSECAG +S P ++ K +G
Sbjct: 404 KALGLDQSRFLMYGAAPLSPAIREYFLSLNMYLISGYGMSECAGPECLSDPSNYDKFEGD 463
Query: 180 ----VGRTIPGTQTKIVDPDEEGNGEIC----------LKEYEANVRTV-AKAFLKLG-- 222
G I GT I PD+EGNGEIC K +A +T+ ++ FL G
Sbjct: 464 FFNSTGAGISGTDLVIYQPDKEGNGEICYKGRNRFMGYFKNEDATRQTIDSQGFLHSGDV 523
Query: 223 --LERYHSVCIIG 233
L+++ ++ I G
Sbjct: 524 GKLDKFGNLTITG 536
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 331 LDRVLETIATNECCTLVYTSGTEGASKPVMLSH---DNITF-NAACIIQYFKLESAALSV 386
LD+ T L+ T+G E + PV++ + +N+ F + A +I + L
Sbjct: 526 LDKFGNLTITGRIKELIITAGGENVA-PVLIENILKENLNFVSNAVVIGDKRKYLVVLLT 584
Query: 387 ISFLP-----LSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNA 441
F+ + ++ +++ + + A K K+ +A + AI + N K+IS A
Sbjct: 585 FKFVQEGDKLSNQLSPESLREFEALGSTAKTVAEAKKDPKILQAIEQAIKKTNSKAISRA 644
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q IQK+ L +DFSI G+L PT+K+KR V +K++++I+ Y
Sbjct: 645 QNIQKYAILDSDFSIDGGDLTPTLKLKRNVVNQKHEALIESLY 687
>gi|345787297|ref|XP_542142.3| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Canis
lupus familiaris]
Length = 584
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 135/212 (63%), Gaps = 6/212 (2%)
Query: 216 KAFL-KLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDA 274
+ FL +LGLER+HSV I+G N+ EW + +GAI AGGF+ G+ +TNSP+AC +S+
Sbjct: 4 EGFLPQLGLERFHSVGIMGLNSQEWVIASIGAIMAGGFSVGILSTNSPKACQVIAESSEI 63
Query: 275 NICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELGRAAPDESLD 332
+I VV++D+QL+K+++++ LKAIVQY E + + SW ++L +++LD
Sbjct: 64 DIFVVDNDRQLQKVIQIQGYLKHLKAIVQYKEEIRTRLQNLYSWRGFLDLADGISEDTLD 123
Query: 333 RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE---SAALSVISF 389
RV+++ N+CCTLVY+ G K +MLSHDNIT+ Q + ++S+
Sbjct: 124 RVIDSQKPNQCCTLVYSLSVTGPPKAMMLSHDNITWTTVATAQSLSYKCPPEEQEVLVSY 183
Query: 390 LPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
LPLS+++AQ D++ + VA L+FA +AL+
Sbjct: 184 LPLSYMSAQLFDMWISIFVAGALYFAQPDALR 215
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%)
Query: 71 TYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCR 130
T +L ++ +R I +A L+ + + P + L + L ++ ++++GL CR
Sbjct: 246 TNQLASSPFRRRIDKWAMWLGLRTNKRRILGQLHPPLCFSLAKKLTFNQARKSLGLHHCR 305
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK 190
+ + YFLSL++PI E++G+SE G HT+S DF+L G+++P T TK
Sbjct: 306 QFFNLGLGLPRATMDYFLSLNMPIFELYGLSESTGIHTLSRQQDFRLLSCGKSLPSTHTK 365
Query: 191 IVDPDEEGNGEI 202
+ DEEG G+I
Sbjct: 366 MQREDEEGIGDI 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V + ID AN + S++ KI K+ L DFS+ GELG T K+KR V K YQ+ I+
Sbjct: 516 VLEFISQGIDAANAEVSSDSAKIVKWTILETDFSVAGGELGATTKLKRAMVAKIYQTEIE 575
Query: 482 KFY 484
+FY
Sbjct: 576 RFY 578
>gi|426386833|ref|XP_004059885.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Gorilla
gorilla gorilla]
Length = 643
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 110/161 (68%), Gaps = 3/161 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDK-PGVISWDELMELGR 324
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY K + SWD+ MELGR
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLEPLKAIIQYRLPMKKNNNLYSWDDFMELGR 205
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDN 365
+ PD L++V+E+ N+C L+YTSGT G K VMLSHDN
Sbjct: 206 SIPDTQLEQVIESHKANQCAVLIYTSGTTGIPKGVMLSHDN 246
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 314 KSTGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 373
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 374 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 433
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 434 NKDGTGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 482
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKATQ I+ +++++AQKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 580 VYKATQQGINAVKQEAMNSAQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 639
Query: 482 KFY 484
Y
Sbjct: 640 HMY 642
>gi|310751920|gb|ADP09391.1| long-chain acyl-coenzyme A synthetase [Nannochloropsis oculata]
Length = 648
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 9/235 (3%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P+ G +EY T AK+ L L + ++ IIGFN+PEW ++ GAI AGG
Sbjct: 58 PETTGWSVYAWREYYDLTLTFAKSLLALDFPAHGAINIIGFNSPEWLIANCGAIAAGGVG 117
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----- 308
G+YT+N+ EAC + S+A + VVE+ KQLEK +K+ P+LKA+V Y+G
Sbjct: 118 VGIYTSNNAEACNYISEHSEAEVVVVENAKQLEKYVKIAKNLPRLKALVVYDGTGEGFTC 177
Query: 309 DKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
D P + SW M LG+ + ++ +E CCTL+YTSGT G K VM+SHDN+T+
Sbjct: 178 DTP-IYSWKAFMALGKDKSEAAVRARIEAQRPGHCCTLIYTSGTTGPPKAVMISHDNLTW 236
Query: 369 NAACIIQY--FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ F L SV S+LPL H+AAQ +D++ + A ++FA +AL+
Sbjct: 237 TVKNFVAALPFTLTCEDRSV-SYLPLPHVAAQMLDVHCPIASGAKIYFAQADALR 290
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 29/197 (14%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSL-----QHYMAYLEKNVSEPYTYRLVRWLI 116
W+K+ K+Q TTGVKR +A +AK+ L Q Y V Y LV
Sbjct: 312 WEKIYEKMQEVARSTTGVKRALAQWAKAKGLEKNRRQQYGGGGGAPVGFGCAYALV---- 367
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
LSKVK A+GL + ++ ++ AAPIS E+ YF SLDIP+ E+FG SEC G HT + +K
Sbjct: 368 LSKVKAALGLHQTKICITSAAPISVEVLEYFASLDIPVLELFGQSECTGPHTSNFSYAWK 427
Query: 177 LDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNA 236
+ +GR IPG +TK E KE+ R + ++K+ + +V +
Sbjct: 428 IGSIGRDIPGVKTK---------QEAAAKEFCMFGRHIMMGYMKMEEKTKEAV-----DE 473
Query: 237 PEWFYS-DLGAIYAGGF 252
W +S D+ + A GF
Sbjct: 474 EGWLHSGDVADVDADGF 490
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ +AN + NAQ +QK+ LP DFS GEL PT+K+KR V +KY + Y
Sbjct: 592 GLKKANAAATFNAQFVQKWAVLPLDFSEKGGELTPTLKLKRSVVAEKYADVTANLY 647
>gi|348550686|ref|XP_003461162.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Cavia
porcellus]
Length = 661
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 132/222 (59%), Gaps = 5/222 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y R AK FLKLGL R+H+V I+G N+ EW + +GAI AGG + T S +A
Sbjct: 66 QYYELCRRAAKGFLKLGLRRFHTVGILGLNSQEWVIASIGAIMAGGICVSILPTTSSKAY 125
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDELMELG 323
+S+ N+ VV+ KQL+KI +V++ L+AIVQY+ + +P + SW + ++LG
Sbjct: 126 QVIARSSEINVLVVDSSKQLQKISQVQSSLRHLRAIVQYKEAIETQQPNLYSWQKFLDLG 185
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ---YFKLE 380
DE LD +++ N+CC LVY+ G K +MLSHDNIT+ A +Q Y
Sbjct: 186 GHISDERLDSIIDAQKPNQCCALVYSLVATGPPKIIMLSHDNITWTTAATVQSLGYKHPP 245
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKV 422
++S+LPLS+ +AQ +D++ + V TL+F+ ++A K+
Sbjct: 246 RGQEVLVSYLPLSYASAQILDMWVAIAVGGTLYFSPQDAEKL 287
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%)
Query: 71 TYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCR 130
T +L +T +++ I +A L+ + + +RL + L + ++ +GL C
Sbjct: 327 TSQLASTVLRQRIDAWAMDVGLRTNKKRMFGELHSSLNFRLAKKLTFRRARKLLGLGHCE 386
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK 190
LS +S +FLSLDIPI E++G SEC G H+++ DF+L G+ +P T+TK
Sbjct: 387 RFLSTGVGLSRATLDFFLSLDIPIYELYGPSECTGVHSLATGQDFRLLSCGKGLPSTRTK 446
Query: 191 IVDPDEEGNGEI 202
+V+ DEEG G I
Sbjct: 447 VVEEDEEGIGSI 458
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ ++ N ++ S + ++ ++ L DFS+ GELG T ++KR ++K YQ+ I+ FY
Sbjct: 602 RKGMEAVNAEAPSESARVVQWAVLDTDFSVGGGELGVTSRLKRATILKMYQAEIESFY 659
>gi|281209622|gb|EFA83790.1| hypothetical protein PPL_02858 [Polysphondylium pallidum PN500]
Length = 1001
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 132/231 (57%), Gaps = 23/231 (9%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y +V + AK+F+KLG++ V IIGFN+PEW + LGAI+AGG G+YTT+S C
Sbjct: 110 KYREDVYSAAKSFVKLGMKETSGVNIIGFNSPEWHMAHLGAIFAGGLPTGIYTTSSTPQC 169
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPK-LKAIVQYEGKPDKP------GVISWDE 318
+ S+A VVE+++QL K ++ + ++A + E P P G +W++
Sbjct: 170 EYFAEHSEAMFIVVENEQQLAKYAPIREKLSSTVRAYIIME--PSDPAATHPEGTYTWEQ 227
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
MELGRA PD +DR+ ++I CTL+YTSGT G K M++ N+ +
Sbjct: 228 FMELGRAVPDSEIDRISKSIKPETLCTLIYTSGTTGMPKGCMITQRNVAWTVHT------ 281
Query: 379 LESAALS--------VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L S LS +IS+LPLSHIA Q V +Y+ + + FADKNAL+
Sbjct: 282 LGSLVLSPKSGHRERMISYLPLSHIAEQVVSLYAPLIFGFAISFADKNALQ 332
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 67 WKKVTYKLQTT-----GVKRWIANYAKSTSLQ--HYMAYLEKNVSEPYTYRLVRWLILSK 119
W+K+ K+ G+ + + +AK L+ + + + EK +P Y L R L+ K
Sbjct: 354 WEKIQLKINMVMSTKKGIAKKLVGWAKHKGLEGGYKIQHGEK---KPKGYGLARTLVFKK 410
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG 179
V + +GL CR S AAPIS + +FLSL I I E +GMSE G T+ P K
Sbjct: 411 VLKTLGLSSCRFMASTAAPISKDTLDFFLSLGITITEAYGMSELTGPQTIGYPKA-KTGS 469
Query: 180 VGRTIPGTQTKIVDPDEEGNGEICLK 205
VGRT+PG+ K+ EG+ EIC+K
Sbjct: 470 VGRTLPGSLIKL----NEGDNEICVK 491
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSI--PTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q+ I+ N + + N I+K++ P +F+ P EL PT K+KR ++ KY + I + Y
Sbjct: 614 QSKINEVNSR-LPNVSTIKKYKICPTEFTDQGPDAELTPTQKLKRKIILAKYDAAIREMY 672
>gi|145520086|ref|XP_001445904.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413370|emb|CAK78507.1| unnamed protein product [Paramecium tetraurelia]
Length = 667
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 132/223 (59%), Gaps = 9/223 (4%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y + V A A ++L + +V IIGFNAPEW + +G+I+A G+YTTN+PEACL
Sbjct: 80 YYSAVLDFASALIELNITELSAVNIIGFNAPEWNIAFMGSIHAHNLPVGIYTTNNPEACL 139
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDEL 319
+ S+ + V + +QL+K L + + PKLKA+V Y P V SW++
Sbjct: 140 YVSEHSECELLVADTREQLQKYLSIWDRLPKLKAVVLYNDNLDHIKNIPPYRKVYSWNDF 199
Query: 320 MELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+E+G+ + + + +D+ + CCTL+YTSGT G K VMLSHDN F A ++ +K
Sbjct: 200 LEIGKKSNNLKVVDQRTSKLEPGNCCTLIYTSGTTGNPKGVMLSHDNYMFIVAQHLKKYK 259
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ ++S+LPLSH+AAQ VD+ + L+FA+ +AL+
Sbjct: 260 IDD-GYRIVSYLPLSHVAAQLVDLIGLFRWGGHLYFANPDALQ 301
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q +K IA +AKS A + + P + L ++ +VK
Sbjct: 323 WEKIYEEMQKVAKSNGVIKTLIATWAKSLGKSGTFAQTHE-LQPPTCFNLAETMVYQQVK 381
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAP------DDF 175
+A+GLD+ L GAAP++ +++ YFLSL++ + +GMSEC G T+S P D F
Sbjct: 382 KALGLDKAAYLLFGAAPLNPKIREYFLSLNMFLINAYGMSECGGVQTLSFPENFSQFDSF 441
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ G+ I GTQ KI D++GNGEIC K
Sbjct: 442 FMSSAGQAIEGTQMKIFQQDKDGNGEICYK 471
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 331 LDRVLETIATNECCTLVYTSGTEGASKPVMLSHD---NITFNAACIIQYFKLESAALSVI 387
+D+ I T L+ T+G E + P+++ ++ N+ F + C++ LSV+
Sbjct: 504 IDQKGNLIITGRIKELIITAGGENVA-PILIENEIKKNLEFVSNCMV--IGDNRRYLSVL 560
Query: 388 SFLPLSHIA-----AQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQ 442
L A A+ + + AT K V K Q+ ID+AN IS AQ
Sbjct: 561 LTLKQDQTAKGKLSAEVISEFQAQGSQATTVEEAKLDPNVKKHIQSLIDQANQYVISKAQ 620
Query: 443 KIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+I+K+ + DFS+ TGEL PT+K+KR V KK++ I++ Y
Sbjct: 621 QIRKWTIIEGDFSVETGELTPTLKLKRKVVEKKWKGEIERMY 662
>gi|320168170|gb|EFW45069.1| long-chain-fatty-acid-CoA ligase ACSBG2 [Capsaspora owczarzaki ATCC
30864]
Length = 645
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 130/220 (59%), Gaps = 2/220 (0%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
++Y+ +V VA+A ++LG++ + I+ FN PEW +LG ++A G+YTTN E
Sbjct: 60 FQKYQDDVLRVARALIQLGIDAHSCAGILAFNCPEWNIIELGCMFAAVIPFGIYTTNGEE 119
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--KPDKPGVISWDELME 321
AC L + A+I VED + L+KIL ++AQ P LKAIVQ G + G+ +++E +
Sbjct: 120 ACQFVLNHAKASIVFVEDAEALKKILAIRAQLPALKAIVQLFGTVEAGHSGIYTFEEFLA 179
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
G AAP +++ + I CC ++YTSGT G K VM+SHD++T+ + + + +
Sbjct: 180 KGSAAPASAVEERAKLITPGHCCIVIYTSGTTGEPKAVMISHDSLTWVSRIAQSTYGIRA 239
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+SFLPLSH+AAQ +D+ + +FA + AL+
Sbjct: 240 GTEVFVSFLPLSHVAAQIIDVCLALLSGVETFFAPREALR 279
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+KV+ K+ Q TG+K+WIA +A+ T L MA L+ S P + L L+ SKVK
Sbjct: 301 WEKVSEKMREVGEQQTGLKKWIAGWARRTGLAGNMA-LQDGKSLPAGWWLADKLVFSKVK 359
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRCR + +GAAPIS E YFLSLDIP+ +++GMSE T+ P F+ G
Sbjct: 360 SALGLDRCRKTFTGAAPISLETITYFLSLDIPLYDIYGMSETTAIITLPEPSTFRSGTCG 419
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
+ + G I PD EGNGEI ++
Sbjct: 420 KLLQGLDVLIDRPDREGNGEILVR 443
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 390 LPLSHIAAQTVDIYSVMTVAA--TLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKF 447
LP + + T+ ++ + ++ T+ A KN+ V+ + AN K +NAQ +QK+
Sbjct: 544 LPSDRLPSSTLKLFEQLGISGCTTVSAALKNS-HVHSFIAEGVQVANRKIANNAQHVQKW 602
Query: 448 EFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
LP DFS+ ELGPT+K+KR V+KKY++++D+ Y+
Sbjct: 603 RLLPVDFSVYGNELGPTLKLKRRVVMKKYKNVVDEMYE 640
>gi|148706261|gb|EDL38208.1| mCG127436, isoform CRA_a [Mus musculus]
Length = 669
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 125/219 (57%), Gaps = 7/219 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AKAFLK+GLER+H V I+G N+ EW + +GAI AGG + G+ ++ SP+AC
Sbjct: 107 EYYEACRRAAKAFLKVGLERFHGVGIMGINSSEWVIASIGAIMAGGISVGILSSISPKAC 166
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELG 323
TS+ +I VV++D+QL+KI +++ LKAI+QY + + +P + SW ++L
Sbjct: 167 QVIAETSEMDIFVVDNDRQLQKINQIQGYLKHLKAIIQYREDIQEAQPNLYSWKGFLDLA 226
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI-----TFNAACIIQYFK 378
DE LD++++T+ N+CC LVY GT G SK +MLSHDNI + A + +
Sbjct: 227 DGISDEKLDKIIDTLKPNQCCALVYNQGTTGPSKAIMLSHDNILDVWVAISVAGTVYFPS 286
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
L+S S + P + + + T W D+
Sbjct: 287 LDSGKWSGLPRTPGTGFLMELLREVQPTTFCGIPWVWDR 325
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 72/131 (54%)
Query: 74 LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSL 133
L +T +R I ++A L + + +P + L + L + ++ +GL+ C+ L
Sbjct: 335 LDSTAFRRRIDHWAMRMGLHTNKKLMMGEIHQPLCFGLAKRLTFERARKFLGLNHCQQFL 394
Query: 134 SGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVD 193
+ + + +FLS++IPI E++G+SEC G HTVS +++ G+ +P T TK+
Sbjct: 395 NMGMGLPSGTLDFFLSVNIPIMELYGLSECTGLHTVSNLQAYRILSAGKALPKTHTKVEK 454
Query: 194 PDEEGNGEICL 204
+++G G +C+
Sbjct: 455 ENKDGIGNLCI 465
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
D++ L V + I+ N ++ + KI K+ L DFS+ GELGP K+ R VVK
Sbjct: 597 DRDPL-VTEFINQGIEDVNSEAPTMGAKIIKWVILDNDFSVDGGELGPMSKMNRSIVVKI 655
Query: 476 YQSIIDKFYD 485
YQ I K Y+
Sbjct: 656 YQEEIQKLYE 665
>gi|323451296|gb|EGB07174.1| hypothetical protein AURANDRAFT_10354, partial [Aureococcus
anophagefferens]
Length = 674
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 144/280 (51%), Gaps = 41/280 (14%)
Query: 179 GVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKA------------FLKLGLERY 226
GV P T +VD E+ E E N R+ A + LGL
Sbjct: 24 GVASRAPETVGALVDRLEDNASEALAWEDGGNWRSFTWAEYVAQVRAAARAMIALGLAPT 83
Query: 227 HSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLE 286
V I+GFN+ EW +DLGA+ AGGFA+G+Y+TN P+A + L S A + VVE QL+
Sbjct: 84 QGVGIVGFNSKEWLIADLGAVLAGGFASGIYSTNGPDAVQYVLEHSRAALVVVEGKGQLD 143
Query: 287 KILKVKAQCPKLKAIVQYEGK--------PDKPGVISWDELMELGRAAPDES--LDRVLE 336
K+ V P LKA V + P P V++WD + +AP + L +
Sbjct: 144 KVRSVAGALPGLKAAVVWGDAGSDLSALGPSAP-VLAWDAFLA---SAPADGGPLAARVA 199
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS---VISFLPLS 393
+ CCTL+YTSGT G K VM+SHDN+T+ A ++ + A ++S+LPLS
Sbjct: 200 AQESGHCCTLIYTSGTTGRPKAVMISHDNVTWVVASFAEFVRFGKAPGGRERLVSYLPLS 259
Query: 394 HIAAQTVDIYS-VMTV-----------AATLWFADKNALK 421
HIAAQ +DIY+ ++TV AATL+FA +ALK
Sbjct: 260 HIAAQAIDIYAGLVTVGRSVGCGPVVNAATLFFARPDALK 299
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHY----------MAYLEKNVSEPYTYRL 111
W+K LQ TTGVK+ ++ +AK +L Y + R
Sbjct: 321 WEKFAEALQAVGASTTGVKKKLSTWAKKVALAKYREGRADAAAGAYAGLLGGALTAAERT 380
Query: 112 VRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSA 171
+IL KV A+GLDR +GAAPI++ YF SL + + E FGMSE AG V+
Sbjct: 381 FAMVILKKVHAAIGLDRAHFLFTGAAPIASSTLEYFGSLGLVVNEAFGMSEVAGPAAVTL 440
Query: 172 PDDFKLDGVGRTIPGTQTK---IVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHS 228
+ + G +PG + K + D+ G GE+C + R+V +L+ + +
Sbjct: 441 NEYYAPGYCGPAVPGVEIKLDHVAGRDKPGEGEVCFRG-----RSVMLGYLRDDGKTREA 495
Query: 229 VCIIGFN 235
V G+N
Sbjct: 496 VDADGWN 502
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 424 KATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKF 483
KA Q AID N ++S+AQK+QKF LP DFS TGEL PT+K+KR VV+KY + K
Sbjct: 614 KACQTAIDAYNDTAVSSAQKVQKFAILPLDFSQNTGELTPTLKLKRAAVVEKYGFQLKKI 673
Query: 484 Y 484
Y
Sbjct: 674 Y 674
>gi|300121230|emb|CBK21611.2| unnamed protein product [Blastocystis hominis]
Length = 645
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 126/226 (55%), Gaps = 10/226 (4%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
++ Y+ +VR +KA KLGL + +IGFN+PE+F++ G G G+YTTN+PE
Sbjct: 61 MEYYKQSVR-FSKAATKLGLSTASTCGVIGFNSPEYFFTLYGCWLIGAVPVGIYTTNAPE 119
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY---EGKP-----DKPGVIS 315
AC + L S+A +CV + KQ EKI ++ Q P LKAIV Y EG P D+ + +
Sbjct: 120 ACHYNLFHSEAQMCVCQGGKQAEKIFSIRDQLPNLKAIVVYWPEEGMPAKVENDRVALYT 179
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
WDE +E G DE++ + + C TL+YTSGT G K M+SHD+ TF I
Sbjct: 180 WDEWLETGNEISDETIVEKAKNVEPGSCATLIYTSGTTGDPKGAMISHDSCTFQCEGIRI 239
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L+ SFLPL+HIAAQ VD + ++ D NALK
Sbjct: 240 RIGLDHHD-RYTSFLPLNHIAAQYVDAMVPVFNNVCVYICDTNALK 284
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAY-LEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSL 133
Q TG KR + ++A M+ + P+ Y L L+ ++ +G +CR +
Sbjct: 319 QATGFKRKLIDWAMRVGYASCMSRQFGQTHYRPWGYWLADRLVFQSIRDKLGFGQCRGLV 378
Query: 134 SGAAPISTELKRYFLSLDIPICEVFGMSE-CAGAHTVSAPDD-FKLDGVGRTIPGTQTKI 191
AAP++ E R+F DIPI ++ G SE CA T S + +KL G+ +PG +I
Sbjct: 379 VSAAPVNIETLRFFAKFDIPIYDLLGQSEGCAPFATNSYVEQLWKLGSGGKPMPGVTVRI 438
Query: 192 VDPDE 196
D DE
Sbjct: 439 GDMDE 443
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 437 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++SNAQ I+K+ L D S+ GEL TMK+KR V++ + I + Y
Sbjct: 597 AVSNAQTIRKWIVLDRDISLERGELTATMKMKRNVVLRHCEKEISEMY 644
>gi|145553301|ref|XP_001462325.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430164|emb|CAK94952.1| unnamed protein product [Paramecium tetraurelia]
Length = 682
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 130/228 (57%), Gaps = 14/228 (6%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y AKA + G+ +V IIGFNAPEWF S +G+I++ G+YTTN+PEA
Sbjct: 86 QDYYNESLQFAKALIAYGVSEMSAVNIIGFNAPEWFISFMGSIHSHNLPVGIYTTNNPEA 145
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG--------VISW 316
C + S+ + VV+ +QL K L++ + PKLK +V Y + K G + W
Sbjct: 146 CFYVSEHSECELVVVDTREQLNKYLQIWDKLPKLKGVVIYNDEIPKEGISEQRRSQIFKW 205
Query: 317 DELMELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+ +E G+ E +++V+E ++ C TL+YTSGT G K VMLSHDN F
Sbjct: 206 KDFLEFGKKP--ELINQVVERVSQLRPGNCVTLIYTSGTTGNPKGVMLSHDNYIFTITQQ 263
Query: 374 IQYFK-LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNAL 420
+ ++ L++ + ++S+LPLSH+A Q +DI A ++FA+ +AL
Sbjct: 264 RKKYQFLDNEEMRIVSYLPLSHVAGQLIDIVGSCRWGAHIYFANPDAL 311
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 87/150 (58%), Gaps = 12/150 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q +K IA +AKS + A L P + L L+ + VK
Sbjct: 334 WEKIYDQMQMIAKSNGAIKTKIATWAKSIGKEGTFA-LTHGQKPPLCFGLADKLVYNNVK 392
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAP------DDF 175
+A+GLD+ + + GAAP+S ++ YFLSL++ + +GMSEC G T++ P DDF
Sbjct: 393 KALGLDQAKYLIFGAAPLSPVIREYFLSLNMYLINGYGMSECGGVTTLADPLHFDKFDDF 452
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ G+T+ GT+ KI PD++GNGE+C +
Sbjct: 453 FMNSTGKTMEGTELKIDQPDKDGNGEVCYR 482
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +D AN + IS AQ I+K+ +P+DFS+ GEL PT+K+KR V +K+ + I+K Y
Sbjct: 620 QKLVDDANTRVISKAQYIRKWTLIPSDFSVDGGELTPTLKLKRRVVEQKWINEIEKMY 677
>gi|300176621|emb|CBK24286.2| unnamed protein product [Blastocystis hominis]
Length = 661
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 10/225 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y N AK+ LKLGL + IIGFN+PE+++S G A AG+YTTNSPEAC
Sbjct: 59 DYYNNSMKFAKSLLKLGLNKKDVCGIIGFNSPEYYFSLQGTWMADCVTAGIYTTNSPEAC 118
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---------VISW 316
+ L S+A +CV + K KI +++ P LKAIV Y + D P + +W
Sbjct: 119 EYVLKHSEAKVCVCQSGKSAMKICQIRDNLPLLKAIVVYWPEDDMPSLEDKEGFAKLYTW 178
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
D+ +++G PD +D ++ C TL+YTSGT G K VM SHD AA I Y
Sbjct: 179 DDFLKIGSDLPDSDVDARIDACQPGSCATLIYTSGTTGEPKGVMCSHDGCMCQAANIRYY 238
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+L +SFLP++HIAAQ D + T++ A +AL+
Sbjct: 239 LQLNDED-RFVSFLPMNHIAAQYADTMVPVRNRITMYMARPDALR 282
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 101 KNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGM 160
+ + PY Y L + L KVK+ +GLD+ R+ + AAP++ E +F S D P+ ++ G
Sbjct: 344 QTFTPPYFYWLAKRLAFDKVKETLGLDKTRLVIVSAAPVTEETLNFFASYDFPLYDLLGQ 403
Query: 161 SECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAF 218
SE + D +KL VGR + G + K DPD + E C + R +
Sbjct: 404 SEGTAPICTNTFVDQQWKLGTVGRALRGVEVK-TDPDSD---EFCYRG-----RNCMMGY 454
Query: 219 LKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
LK +ER + I + W +S D I A GF
Sbjct: 455 LK--MERETNAAI---DEDGWLHSGDQAKIDADGF 484
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 346 LVYTSGTEGASKPVMLSHDNITF-----NAACIIQYFKLESAALSVISFL------PLSH 394
L+ T+G E S PV + + I N + K SA +++ + + P S
Sbjct: 494 LIVTAGGENVS-PVPIENKVIELCPLISNCVVVGDQRKFLSALIALKTEVDPATGEPSSR 552
Query: 395 IAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADF 454
IAA V+ AT V + Q A+D N +IS AQ+I+K+ L D
Sbjct: 553 IAASMVESLRSRGSKATTVQEAMQCPVVKQWIQDAVDGYNKVAISRAQEIRKWTMLEQDL 612
Query: 455 SIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
S+ GEL T+K+KR V + Y+ I YD
Sbjct: 613 SLGRGELTATLKMKRNVVHQHYEKEIQAMYD 643
>gi|197387629|ref|NP_001128038.1| uncharacterized protein LOC316124 [Rattus norvegicus]
gi|149028162|gb|EDL83600.1| similar to gonadotropin-regulated long chain acyl-CoA synthetase,
isoform CRA_a [Rattus norvegicus]
Length = 669
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 114/187 (60%), Gaps = 7/187 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AKAFLK+GLER+H V I+G N+ EW + +GAI AGG + G+ ++NSP+AC
Sbjct: 107 EYYEACRRAAKAFLKVGLERFHGVGIMGINSSEWVIASIGAIMAGGISVGILSSNSPKAC 166
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELG 323
TS+ +I VV++D+QL+K+ +++ LKAI+QY + + +P + SW ++L
Sbjct: 167 QIIAETSEMDIFVVDNDRQLQKVNQIQGYLKHLKAIIQYREDIQEVQPNLYSWKGFLDLA 226
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI-----TFNAACIIQYFK 378
DE LD++++ N+CC LVY GT G K +MLSHDNI + A + +
Sbjct: 227 DGISDEKLDQIIDAQKPNQCCALVYNQGTTGNPKAIMLSHDNILDVWVAISVAGTVYFPS 286
Query: 379 LESAALS 385
LES S
Sbjct: 287 LESGKWS 293
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%)
Query: 71 TYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCR 130
T L +T +R I +A L + + +P + L + L K+ +GL+ C
Sbjct: 332 TKHLDSTAFRRKIDRWAMRMGLSTNKRQMMGGIHQPLCFGLAKRLTFKPAKKFLGLNHCE 391
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK 190
L+ + +FLS++IPI E++G+SEC G HT+S+ +++ G+ +P T TK
Sbjct: 392 QFLNVGMGLPRSTLDFFLSMNIPILELYGLSECTGLHTLSSLQAYRILSSGKALPKTHTK 451
Query: 191 IVDPDEEGNGEICL 204
+ +++G G +C+
Sbjct: 452 VEKENQDGVGNLCI 465
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
I N ++ S KI K+ L DFS+ GELGP K+ R V+K Y+ I K Y+
Sbjct: 609 GIQDVNSEAPSVGAKIIKWVILDNDFSVDGGELGPMSKMNRSTVIKIYKEEIQKLYE 665
>gi|301628327|ref|XP_002943308.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Xenopus
(Silurana) tropicalis]
Length = 494
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 133/218 (61%), Gaps = 6/218 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+YE R V+K +++GL R+H V I+G N+PE F +++G+I AGG A + +
Sbjct: 46 QYEQQCRAVSKGLIRIGLRRFHGVVILGKNSPECFIAEIGSIMAGGLAVVIDPLCTASFL 105
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG--VISWDELMELG 323
L ++A + +++D +QL K+L+V+ + P++KAIVQ+EG + P + +W+EL+ LG
Sbjct: 106 LDVAQNTEAQVILLQDHRQLRKVLQVQRKLPQVKAIVQWEGGKESPHPRLYTWEELILLG 165
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
PD LD V+ + N+CC++ Y + + VMLSHDN+T+ + ++ L
Sbjct: 166 MEVPDSKLDDVIASQKPNQCCSVFY---AKDDPRGVMLSHDNLTWVSQTTCKHLSLGKHD 222
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ VIS+LPL+ +AAQ D++ + T +FA+ +AL+
Sbjct: 223 V-VISYLPLNQVAAQLFDLWIPLCSGGTTYFAEADALR 259
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 19/193 (9%)
Query: 67 WKKVTYKLQTTGVK-----RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ + T K R I + + L +Y E + P+ + L + L+ +
Sbjct: 281 WEKIQTRWMTLEEKAKLFPRKIMGWGRGVGLTNYQK--EGAGAAPWGFSLAQRLVFHPAR 338
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+GLDRC + G PI+ Y+ SL + + V+G +E +G H+++ + ++ G
Sbjct: 339 VALGLDRCSLCYVGTVPITQGTMEYYGSLGLTLLNVYGRNESSGVHSLAMNNAWRTKSSG 398
Query: 182 RTIPGTQTKIVDPDEEG-NGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWF 240
I G +T I +P +G GE+CL R V + LG+E+ + G W
Sbjct: 399 LEILGCRTHIKEPLRQGATGELCLWG-----RHVFMGY--LGMEKETQAALDGEG---WL 448
Query: 241 Y-SDLGAIYAGGF 252
SDLG GF
Sbjct: 449 LTSDLGTRDPSGF 461
>gi|113912043|gb|AAI22714.1| Acyl-CoA synthetase bubblegum family member 2 [Bos taurus]
Length = 280
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 109/165 (66%), Gaps = 5/165 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R A+A LKLGLE +HSV I+GFN+ EW + LGAI+AGGF G+Y TN +AC
Sbjct: 94 YEA-CRKTARAMLKLGLEPFHSVGILGFNSIEWILAALGAIFAGGFCVGIYATNFADACE 152
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYEGKPDKP---GVISWDELMEL 322
+ + + NI ++E++ QL+KIL + + LKAIVQY+ D + SWD+ +EL
Sbjct: 153 YVITHAKVNILLLENNAQLQKILSIPMNKMETLKAIVQYKPPVDDSKCENLYSWDDFLEL 212
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNIT 367
G + PD LD+++++ N+C ++YTSGT G K VMLSHDN T
Sbjct: 213 GSSIPDAQLDQIIKSQKANQCAVIIYTSGTTGQPKGVMLSHDNGT 257
>gi|83859093|ref|ZP_00952614.1| putative fatty-acid--CoA ligase [Oceanicaulis sp. HTCC2633]
gi|83852540|gb|EAP90393.1| putative fatty-acid--CoA ligase [Oceanicaulis alexandrii HTCC2633]
Length = 611
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 136/240 (56%), Gaps = 7/240 (2%)
Query: 182 RTIPGTQTKIVDPD-----EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNA 236
R + +T+ DP EG EY VRT A+A + LG E +V I+G+N
Sbjct: 23 RLLEKAETRGSDPAYAVRLGEGWAYTSWAEYAEQVRTAARALIALGFEEDETVAILGYNR 82
Query: 237 PEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCP 296
PEW + + A+ AGG AG+Y T++P + L S A + +VE + +E+ L+++A+CP
Sbjct: 83 PEWTITAIAAMMAGGRPAGVYWTSAPPEVAYILQHSKAPVLLVETAEHVEQALELRAECP 142
Query: 297 KLKAIVQYEGKP-DKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGA 355
+L+ I+ EG D P V+SW + M LG +++ ++ I +L+YTSGT G
Sbjct: 143 ELEHIIVMEGGAGDHPDVLSWAQFMALGVEEHQDAVSERMKAINETRIGSLIYTSGTTGP 202
Query: 356 SKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
K VMLSH NI+++AA + + FK + + +S+LP++H+A Q +++ + A + FA
Sbjct: 203 PKAVMLSHGNISWSAAKLSEMFKAQPGDRT-LSYLPIAHVAEQQSSVHNHVMSGAIMHFA 261
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYR---LVRWLILS 118
W+K++ + + TG+K +A +A + + + A L+ P L L++
Sbjct: 286 WEKMSETIRGRLAEATGIKAKLAKWAMGVNRRWHEAKLDGRSPNPLLSLQKPLANALVIK 345
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
KV+ A+GLD R+ +SGAAPIS E+ +F LD+ ICE +G SE + S P ++
Sbjct: 346 KVQAALGLDDSRLLISGAAPISPEVLWFFTGLDLLICEGYGQSETSAPTAFSMPGMMRIG 405
Query: 179 GVGRTIPGTQTKIVDPDE 196
VG+ I G + ++ + E
Sbjct: 406 SVGKMIDGMEARVSEEGE 423
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 417 KNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 476
+ + ++ QAA+D N + + + I+KF L A S+ TGEL PT+KV+R V+ +
Sbjct: 538 RQSQALHDELQAAVDAMN-RRYARVENIRKFRVLDAPLSVETGELTPTLKVRRNVVISRN 596
Query: 477 QSIIDKFY 484
Q+++D Y
Sbjct: 597 QALVDAMY 604
>gi|348681541|gb|EGZ21357.1| hypothetical protein PHYSODRAFT_491045 [Phytophthora sojae]
Length = 626
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 125/226 (55%), Gaps = 17/226 (7%)
Query: 199 NGEICL---KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NGE + ++Y A+A + +G+E + +V ++G N PEW ++++G+I AG AG
Sbjct: 51 NGEWVMYTWQQYYDISHQFARALIHVGVELHEAVNVLGPNCPEWLFTNMGSIMAGAVIAG 110
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS 315
+Y T++PEAC + DA + VV D QL+K L + Q P L + S
Sbjct: 111 VYVTSTPEACQYISAHCDAKVVVVSDKGQLDKYLSILDQLPNL--------------LYS 156
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
+D+ +EL LD + CCTL+YTSGT G K VM+SHDN+T+ A +
Sbjct: 157 FDDFLELSGNVDASLLDERMNAQQPGHCCTLIYTSGTTGPPKAVMISHDNLTWTVAAAMN 216
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
K A +SFLPLSH+AAQ +DI+ + + + ++FA +AL+
Sbjct: 217 TLKDFVDAKRSMSFLPLSHVAAQILDIHLPLAIGSEVYFAGPDALR 262
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 15/147 (10%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+++ +L+L KV+ A+GLD C + L+GAA I + RYF L+IP+ E+FG SEC G
Sbjct: 331 WSFWAADYLLLGKVRNALGLDECSIFLTGAAHIDPNVIRYFSKLNIPLYELFGQSECTGP 390
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERY 226
H++++P +K+ VG + GT+T+I DPD GEI +Y R + +LK
Sbjct: 391 HSINSPGKWKIGTVGPEMEGTRTRI-DPD---TGEI---QYTG--RHIFMGYLK-----D 436
Query: 227 HSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+ + W YS D+G I GF
Sbjct: 437 EAATKATLDEDGWLYSGDVGKIDKDGF 463
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K K + + RAN +++S AQ +QKF + DFS+ EL PTMK KR V KY I
Sbjct: 558 KFCKYIEEGMARANAQAVSRAQCVQKFVIISRDFSLDGNELTPTMKAKRSVVENKYSQEI 617
Query: 481 DKFY 484
++ Y
Sbjct: 618 EQMY 621
>gi|145549628|ref|XP_001460493.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428323|emb|CAK93096.1| unnamed protein product [Paramecium tetraurelia]
Length = 683
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 11/228 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EY AKA + G+ +V IIGFNAPEW S +G+I+A G+YTTN+P+A
Sbjct: 86 EEYYNESMQFAKALIAYGVTEMSAVNIIGFNAPEWHISFMGSIHAHNLPVGIYTTNNPDA 145
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--------KPDKPGVISW 316
C + S+ + V + +QL K LK+ + P+LK +V Y + + V W
Sbjct: 146 CFYVSDHSECELVVADTKEQLRKYLKIWDKLPRLKGVVLYNDDIPTSEIPEQRRSQVFKW 205
Query: 317 DELMELGRAAP--DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
+ +E+G+ A L+RV + C TL+YTSGT G K VMLSHDN F
Sbjct: 206 KDFIEMGKKADLMGSVLERVSKNCGPGNCVTLIYTSGTTGNPKGVMLSHDNYVFTITQQK 265
Query: 375 QYFKLE-SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + ++ + + ++S+LPLSH+ AQ +DI A L+FA+ +AL+
Sbjct: 266 RKYVMQGTGEMRLVSYLPLSHVVAQLIDIIGFARWGAHLYFANPDALQ 313
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 12/150 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q +K IAN+AKS + A + P + L L+ + VK
Sbjct: 335 WEKIYDQMQQIAKSNGAIKTKIANWAKSIGKEGTFAQTH-GLKPPLCFGLADKLVYANVK 393
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAP------DDF 175
+A+GLD+ + + GAAP+S ++ YFL+L++ + +GMSEC G ++ P DD
Sbjct: 394 KALGLDQAQYMIFGAAPLSPIIREYFLTLNMYLINGYGMSECGGVQNMADPFHFDKFDDL 453
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ G+ + GT+ +I +PD++GNGEIC +
Sbjct: 454 FINSTGKPMEGTELRIDNPDKDGNGEICYR 483
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 331 LDRVLETIATNECCTLVYTSGTEGASKPVMLSHD---NITFNAACII--QYFKLESAALS 385
+D+ + T L+ T+G E + PV++ + NI + C++ K S L+
Sbjct: 516 IDKNGNLMITGRIKELIITAGGENVA-PVLIEDEVKKNIKIVSNCMVIGDKRKYLSILLT 574
Query: 386 VISFL-----PLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISN 440
+ L P + + ++ + +AT N + Q ID N K IS
Sbjct: 575 LKHQLAPDGQPTEKLNEDVIAVFKSLGSSATTIEQANNDKAITNYLQQLIDETNTKVISK 634
Query: 441 AQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AQ I+K+ +P DFS+ GEL PT+K+KR V +K+ I+K Y
Sbjct: 635 AQYIRKWTLIPGDFSVDGGELTPTLKLKRRVVEQKWLGEIEKMY 678
>gi|300122976|emb|CBK23983.2| unnamed protein product [Blastocystis hominis]
Length = 647
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 126/229 (55%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E +Y N AK+ K+GL V IIGFN+PE+ ++ G AGG AG+YTTN
Sbjct: 60 EYTYADYYKNAMAFAKSAYKIGLAYKDGVGIIGFNSPEYHFALHGTWLAGGVTAGIYTTN 119
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG-------- 312
+ EA + L S++ ICV + KQL K+L ++ + P LKAIV Y + + P
Sbjct: 120 NEEATKYVLEHSESVICVCQSGKQLTKLLSIRDKLPLLKAIVVYWQEEELPTVPDDAYAR 179
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
V W++ ++LG P+ +++ +E C TL+YTSGT G K VM SHD+ T+N
Sbjct: 180 VYKWEDFVKLGDDVPESAIEERVEMTQPGSCATLIYTSGTTGDPKGVMCSHDSCTYNCHV 239
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
I LE ++ +LPL+H+AAQ VD M T++ A +AL+
Sbjct: 240 IGDTIGLEGNE-RLVGYLPLNHVAAQYVDAMIFMYHPVTVYMAKPDALR 287
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 102 NVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
V +P+ Y L + L+ + V+ +G D+CR + AAP++ E R+F + D+PI ++ G S
Sbjct: 350 TVYKPWGYTLAKALVFNTVRTKLGFDQCRTLVVSAAPVTEETLRFFAAFDMPIYDLLGQS 409
Query: 162 ECAGAHTVSAP--DDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFL 219
E +P +K+ VG +PG + + VDP N EI + R V +L
Sbjct: 410 EGTAPICTCSPVQQRWKIGTVGLPLPGVEVR-VDPQ---NNEIMYRG-----RNVMMGYL 460
Query: 220 K 220
K
Sbjct: 461 K 461
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + + + N ++S AQ+I+K+ +P +F+I GEL TMK++R V + Y I
Sbjct: 583 KVKEYLDGVVQQYNKVAVSRAQEIRKWCIIPEEFTIGKGELTATMKLRRAVVQQHYAKEI 642
Query: 481 DKFY 484
+ Y
Sbjct: 643 ESMY 646
>gi|301121716|ref|XP_002908585.1| long-chain-fatty-acid-CoA ligase, putative [Phytophthora infestans
T30-4]
gi|262103616|gb|EEY61668.1| long-chain-fatty-acid-CoA ligase, putative [Phytophthora infestans
T30-4]
Length = 627
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 120/217 (55%), Gaps = 13/217 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
K+Y + A+A + +G+E + +V ++G N PEW ++++G+I AG AG+Y T++ EA
Sbjct: 62 KQYYEICQQFARALIHVGVEPHEAVNVLGPNCPEWLFTNMGSIMAGAVIAGVYVTSTAEA 121
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
C + DA + VV D QL+K L V Q P + + S+ + + L
Sbjct: 122 CQYISAHCDAKVVVVSDRAQLDKYLSVVEQLPNVP-------------IYSFSDFLRLSE 168
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ LD+ + CCTL+YTSGT G K VM+SHDN+T+ A + A
Sbjct: 169 NVEERLLDQRMAAQLPGHCCTLIYTSGTTGPPKAVMISHDNLTWTVAAAMNTLPALGDAE 228
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++SFLPLSH+AAQ +DI+ + + ++FA +AL+
Sbjct: 229 RIVSFLPLSHVAAQILDIHLPLAIGFEVYFAGPDALR 265
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 21/193 (10%)
Query: 67 WKKVTYKLQTT------GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKV 120
W+K+ L+ G+K+ + +A S ++ T+ +L+LSKV
Sbjct: 287 WEKMMESLKEKLGGAPEGLKKSLLTWAMSKGAKNADQSQYGATGLSLTFWAADYLLLSKV 346
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
+ A+GLD C L+GAAPI+ ++ RYF +L+IP+ E+FG SEC G H+++ + +K+ V
Sbjct: 347 RSALGLDECTTFLTGAAPIAPDVIRYFSTLNIPLYELFGQSECTGPHSINTQEKWKIGSV 406
Query: 181 GRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWF 240
G + GT+T+I D D GEI +Y R + +LK + + W
Sbjct: 407 GPEMEGTKTRI-DSD---TGEI---QYTG--RHIFMGYLK-----DEAATKATLDDDGWL 452
Query: 241 YS-DLGAIYAGGF 252
YS D+G I GF
Sbjct: 453 YSGDVGEIDKDGF 465
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K K + + RAN + S AQ +QKF +P DFS+ EL PTMKVKR V KKY I
Sbjct: 559 KFQKHIEEGMARANSNAASRAQHLQKFFIIPRDFSLDGNELTPTMKVKRSVVEKKYSGEI 618
Query: 481 DKFYDV 486
++ Y V
Sbjct: 619 EQMYAV 624
>gi|162456980|ref|YP_001619347.1| long-chain fatty-acid--CoA ligase [Sorangium cellulosum So ce56]
gi|161167562|emb|CAN98867.1| putative long-chain fatty-acid--CoA ligase [Sorangium cellulosum So
ce56]
Length = 601
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 203 CLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSP 262
+EY VR KA L LGLE +V ++GFN PEW + + GG AG+YTT SP
Sbjct: 35 SFREYAGEVRRAGKALLALGLEPGATVSLLGFNRPEWVVLHVACMAIGGAPAGIYTTCSP 94
Query: 263 EACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-----------DKP 311
E H + + + + +VED QLEK+L + P+L +V G P
Sbjct: 95 EEVRHVVRHAGSQVVLVEDRAQLEKVLSQWDRLPRLSWVVLMRGAEFAGDPRDPRDPRDP 154
Query: 312 GVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
+++WDEL+ G DE L++ L+ + N TL+YTSGT G K VMLSH+N+T +A
Sbjct: 155 RILAWDELLARGDRVSDELLEQRLDALEPNGLATLLYTSGTVGPPKGVMLSHENLTRSAD 214
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNAL----------- 420
+ S ++ +S+LPLSH+A Q I+ +V A ++FA+ A
Sbjct: 215 IGARLIPCSSRDIA-LSYLPLSHVAEQMFTIHIPASVGAAVYFAESMAALADNLKEVRPT 273
Query: 421 ------KVYKATQAAIDRANLKSISNAQKI 444
+V++ +A ID A L QKI
Sbjct: 274 AFFGVPRVWEKLRAGID-AKLSGAKGLQKI 302
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPY---TYRLVRWLILSKVKQAMGLDRCRVSLS 134
G+++ + + A+ LQH P +R L+ +KVK A+GL R S
Sbjct: 298 GLQKIMLDQARRVGLQHSELRARGEPPGPLLALQHRAFDTLVYAKVKAAVGLGRAHAFSS 357
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GAAPI+ E+ +F SLDI I EV+G SE GA + + P KL VG ++PG KI D
Sbjct: 358 GAAPIAKEVLEFFASLDILITEVYGQSEVTGATSYNVPGRTKLGSVGPSVPGMDVKIAD- 416
Query: 195 DEEGNGEICLK 205
+GEI +K
Sbjct: 417 ----DGEILVK 423
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
++ +A Q A+D N ++ + I+KF LP F+I GEL PT+K+KR V + + I
Sbjct: 537 EIREAVQRAVDEVN-GELAQVETIKKFSILPRGFTIEDGELTPTLKIKRRNVSQNFAREI 595
Query: 481 DKFY 484
+ Y
Sbjct: 596 EAMY 599
>gi|298713399|emb|CBJ33608.1| long chain acyl-coA synthetase [Ectocarpus siliculosus]
Length = 660
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 135/221 (61%), Gaps = 6/221 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y K+ L L + V IIGFN+ EWF +++GAI AGG AAG+YT+N PEAC
Sbjct: 71 QYYMETLRFGKSLLSLDFAPHRCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEAC 130
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDKPG----VISWDELM 320
+ S+A + VVE++ QL K +K+ A +KAIV Y G P++ V +W + M
Sbjct: 131 QYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEETECGFPVYTWKQFM 190
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
ELG PD ++ +E +CC+L+YTSGT G K VM+SHDN+T+ A + F
Sbjct: 191 ELGSKIPDTKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWS 250
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A V S+LPLSH+A Q +D+++ M VA+++WFA +ALK
Sbjct: 251 HAERGV-SYLPLSHVAGQLLDMHAPMAVASSVWFAQPDALK 290
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQH-YMAYLEKNVSEPYTYRLVRWLILSKV 120
W+K+ K+Q G K ++ ++K L + P+ +++ L+ SKV
Sbjct: 312 WEKMYEKMQEIGRSIHGAKAALSAWSKGRGLANARRKEYSGGGGTPWGFKIANALVFSKV 371
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
K+ +GLD+ + + AAPI+ E YF SL+I I EVFG SEC G VS + +K+
Sbjct: 372 KEKLGLDKANLCFTTAAPIAQETLEYFASLNIHIMEVFGQSECTGPMAVSTKEAWKMGSC 431
Query: 181 GRTIPGTQTKIVDPDEEGNGEICLK 205
GR + GT++K+ E G GE+C +
Sbjct: 432 GRPMLGTESKL----EPGTGELCYR 452
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ N ++ SNAQ++ K+ FLP DFS+ GEL T+K++R +KY II+ Y
Sbjct: 604 AMKACNARTTSNAQRVAKWAFLPHDFSVEGGELTETLKLRRGPTSEKYSDIIEGLY 659
>gi|344237634|gb|EGV93737.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Cricetulus griseus]
Length = 533
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY R AKAFLK+GLER+H V I+G N+ EW +++GAI AGG + G+ TNSP+AC
Sbjct: 68 EYYEACRRAAKAFLKVGLERFHGVGIMGSNSTEWVIANIGAIMAGGISVGILCTNSPKAC 127
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELG 323
TS+ +I VV++++QL+K+ +++ LKAI+QY + + +P + SW ++L
Sbjct: 128 QVIAETSEMDIFVVDNERQLQKVNQIQGYLKHLKAIIQYREDIQEVQPNLYSWKGFLDLA 187
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDN 365
DE LD+++++ N+CC LVY G G K MLSHDN
Sbjct: 188 DGISDEKLDQIIDSQKPNQCCALVYKQGISGPPKATMLSHDN 229
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K+ I+ K+T L H P Y L + L ++ +GL+ C+ L+ +
Sbjct: 213 KQGISGPPKATMLSH---------DNPLCYGLAKKLTFDPARKFLGLNHCQQFLNLGLGL 263
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGN 199
+FLSL+IPI +++G++EC+G H +S+ F+ G+ +P TK+ + E
Sbjct: 264 PRNTLDFFLSLNIPIFDMYGLTECSGLHALSSHQAFRQLSCGKALPSALTKVEKENRENV 323
Query: 200 GEICL 204
G +C+
Sbjct: 324 GNLCV 328
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
I N ++ S A KI K+ L DFS+ GELGP K+ R V K YQ I KFY+
Sbjct: 472 GIQEVNAEAPSEAAKIIKWVILDNDFSVGGGELGPMTKLNRTAVAKIYQEDIQKFYE 528
>gi|300176923|emb|CBK25492.2| unnamed protein product [Blastocystis hominis]
Length = 568
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 113/199 (56%), Gaps = 8/199 (4%)
Query: 231 IIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILK 290
+IGFN+ E+F+S G +G AG+YTTNSP+AC + L S+A ICV + K KI
Sbjct: 9 MIGFNSAEYFFSLQGTWISGCVPAGIYTTNSPDACQYVLNHSEAKICVCQGGKNAAKIAS 68
Query: 291 VKAQCPKLKAIVQY---EGKPD-----KPGVISWDELMELGRAAPDESLDRVLETIATNE 342
++ P+LKAI+ Y +G P+ V +W++ M LG DE + + I
Sbjct: 69 IRESLPQLKAIIVYWPEDGVPNVEDNQYAKVYTWNDWMNLGNDIADEVILNRAKAIKPGN 128
Query: 343 CCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDI 402
C TL+YTSGT G K VM SHD+ +NA + Y L+ +SFLP++HIAAQ VD
Sbjct: 129 CATLIYTSGTTGNPKAVMCSHDSCVYNAQNVDYYIHLQGLENRFVSFLPMNHIAAQYVDT 188
Query: 403 YSVMTVAATLWFADKNALK 421
+ T++ AD NAL+
Sbjct: 189 MIPVCNKVTVYLADPNALR 207
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG- 165
YTY L ++L+ V+Q +GLD+ R AAP++ + +F SL++PI +V G SE
Sbjct: 275 YTYSLAKYLVFDPVRQKLGLDQARCLAVSAAPVTDDTLNFFASLEMPIFDVLGQSEGTAP 334
Query: 166 -AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLE 224
++++ GR + G + DPD + E + R V ++K+ E
Sbjct: 335 ICFNTDTNQEWRMYTTGRVMRGIHAR-TDPDTQ--------EVQFKGRLVMMGYMKMPAE 385
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%)
Query: 417 KNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 476
KN V K Q AID N +IS AQ+I+K+ + D S+ GEL TMK+KR V + Y
Sbjct: 500 KNDPAVNKMIQEAIDGYNKVAISRAQEIRKWYLMERDLSLGHGELTATMKLKRNVVHQHY 559
Query: 477 QSIIDKFY 484
+ ID Y
Sbjct: 560 EKQIDSLY 567
>gi|403373066|gb|EJY86446.1| AMP dependent ligase [Oxytricha trifallax]
Length = 717
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 19/236 (8%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
K+Y +V A A +K G++ S+ +IGFNAPEW + G I A +G+YTTN+PEA
Sbjct: 107 KQYYRDVVKFAAALIKFGVKERGSINLIGFNAPEWAIAFFGTISANCIPSGVYTTNTPEA 166
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---------VIS 315
CL+ S+A + V E+++ + K L PKL+ IV Y+ K ++
Sbjct: 167 CLYQANHSEAELIVAENEEHMLKYLSQSENLPKLRGIVIYDDDASKLRSKYSEKKNLILG 226
Query: 316 WDELMELG-----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
W E + L + + ++ + + CC +VYTSGT G K VMLSHDN+ +N
Sbjct: 227 WTEFLSLADDYNEKKKLKQIVNERINLLKPGNCCNIVYTSGTTGPPKGVMLSHDNMIYNM 286
Query: 371 ACIIQYFKLE-----SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ ++Q + E + ++S+LPLSH AAQ D+ M ATL FA +AL+
Sbjct: 287 SLVLQSVEQERGWSHDGSERMVSYLPLSHSAAQCTDLLLPMLGHATLTFARPDALQ 342
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAY-------LEKNVSEPYTYRLVRW 114
W+K KL Q G R I+ +AK + +H + EK TY + +
Sbjct: 364 WEKFEEKLKEIGEQAGGFARSISGWAKDKAFRHNINMQTHPQVGYEKGDDPSITYPIAKH 423
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
LIL+++K AMGLD+ ++ AAP++ + YF SLD+ ++GMSE +G T
Sbjct: 424 LILNRIKAAMGLDQSKIFAYAAAPMNRRTQEYFSSLDMVPLSIYGMSESSGGVTTWTESK 483
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK------EYEANVRTVAKAFLKLGLERYHS 228
+ G IPG KI +PDE+G GEIC+K Y N + F K G
Sbjct: 484 SRAFTCGVPIPGVTIKIDNPDEKGIGEICMKGRCIFLGYYKNEEATREIFDKDGFIHSGD 543
Query: 229 VCII--GFNAPEWFYSDLGAIYAGG--FAAGMYTTNSPEACLHCLVTSDANICVVEDDKQ 284
+ + GF +L I AGG A + E C C ANI VV DDK+
Sbjct: 544 LGSLRDGFLEITGRIKEL-IITAGGENIAPILIEHAFQETCPMC-----ANIMVVGDDKK 597
Query: 285 -LEKILKVKA 293
L I+ +K+
Sbjct: 598 FLSAIITLKS 607
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K Q +++ N +IS AQ I+K+ +P DFS+ GEL P++K++R + KKY+ I
Sbjct: 649 EVRKYIQECMEQTNKIAISRAQHIRKWIIVPDDFSVSGGELTPSLKMRRKIIEKKYEQEI 708
Query: 481 DKFY 484
+K Y
Sbjct: 709 EKLY 712
>gi|145510292|ref|XP_001441079.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408318|emb|CAK73682.1| unnamed protein product [Paramecium tetraurelia]
Length = 683
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 126/230 (54%), Gaps = 14/230 (6%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+K N + + + G+ +V IIGFNAPEW S +G+I+A G+YTTN+P+
Sbjct: 86 MKNIIMNQCNLQRPLIAYGITEMSAVNIIGFNAPEWHISFMGSIHAHNLPVGIYTTNNPD 145
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG--------KPDKPGVIS 315
AC + S+ + V + +QL K LK+ + P+LK +V Y + + V
Sbjct: 146 ACFYVSDHSECELVVADTKEQLRKYLKIWDKLPRLKGVVLYNDDIPTSEIPEQRRSQVFK 205
Query: 316 WDELMELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
W + +E+G+ A + + VLE ++ C TL+YTSGT G K VMLSHDN F
Sbjct: 206 WKDFIEMGKKA--DLMGSVLERVSKLRPGNCVTLIYTSGTTGNPKGVMLSHDNYVFTITQ 263
Query: 373 IIQYFKLE-SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + ++ + + ++S+LPLSH+ AQ +DI A L+FA+ +AL+
Sbjct: 264 QKRKYVMQGTGEMRLVSYLPLSHVVAQLIDIIGFARWGAHLYFANPDALQ 313
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 12/150 (8%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q +K IAN+AKS + A + P + L L+ + VK
Sbjct: 335 WEKIYDQMQQIAKSNGAIKTKIANWAKSIGKEGTFAQTH-GLKPPLCFGLADKLVYANVK 393
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAP------DDF 175
+A+GLD+ + + GAAP+S ++ YFL+L++ + +GMSEC G ++ P DD
Sbjct: 394 KALGLDQAQYMIFGAAPLSPIIREYFLTLNMYLINGYGMSECGGVQNMADPFHFDKFDDL 453
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ G+ + GT+ +I +PD++GNGEIC +
Sbjct: 454 FINSTGKPMEGTELRIDNPDKDGNGEICYR 483
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 331 LDRVLETIATNECCTLVYTSGTEGASKPVMLSHD---NITFNAACII--QYFKLESAALS 385
+D+ + T L+ T+G E + PV++ + NI + C++ K S L+
Sbjct: 516 IDKNGNLMITGRIKELIITAGGENVA-PVLIEDEVKKNIKIVSNCMVIGDKRKYLSILLT 574
Query: 386 VISFL-----PLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISN 440
+ L P + + ++ + +AT KN + Q ID N K IS
Sbjct: 575 LKHQLAPDGQPTEKLNEDVIAVFKSLGSSATTIEQAKNDKAITNYLQQLIDETNTKVISK 634
Query: 441 AQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AQ I+K+ +P DFS+ GEL PT+K+KR V +K+ S I+K Y
Sbjct: 635 AQYIRKWSLIPGDFSVDGGELTPTLKLKRRVVEQKWLSEIEKMY 678
>gi|300176922|emb|CBK25491.2| unnamed protein product [Blastocystis hominis]
Length = 630
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 125/226 (55%), Gaps = 13/226 (5%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY N AK+ +K+G++ +IGFN+ E ++ G +G AG+YTTNSP+AC
Sbjct: 47 EYYQNALRFAKSCVKIGMQPLEVTGMIGFNSAELLFTLQGTWISGCVPAGVYTTNSPDAC 106
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY---EGKPD-----KPGVISWD 317
+ L S+A ICV + K KI ++ P+LKAI+ Y +G P+ V +W+
Sbjct: 107 QYVLNHSEAKICVCQGGKNAAKIASIRESLPQLKAIIVYWPEDGVPNVEDNQYAKVYTWN 166
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY- 376
+ M LG DE + + I C TL+YTSGT G K VM SHD+ +N+ + Y
Sbjct: 167 DWMNLGNDIADEVILNRAKAIKPGNCATLIYTSGTTGNPKAVMCSHDSCVYNSLNLDYYA 226
Query: 377 -FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
F LE+ +SFLP++HIAAQ +D+ T++ AD +AL+
Sbjct: 227 HFNLEN---RFVSFLPMNHIAAQFIDVMMPTCNKITVYIADPDALR 269
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 391 PLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFL 450
P ++ + I +AT KN V K Q AID N +IS AQ+I+K+ +
Sbjct: 536 PSQNLLPTVISIIKANGGSATTVAEAKNDPAVNKMIQEAIDGYNKVAISRAQEIRKWYLM 595
Query: 451 PADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
D S+ GEL T+K+KR V + Y+ ID Y
Sbjct: 596 ERDLSLSHGELTATLKLKRNVVHQHYEKQIDSLY 629
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG--A 166
Y L + + ++ +GLD+ R + AAP++ + +F LD+PI ++ G SE
Sbjct: 339 YNLAKRYVFDPAREMLGLDKARTLVVSAAPVTDDTLNFFARLDMPIYDILGQSEGTAPIC 398
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERY 226
++++ GR + G + DP+ + E + R V +LK+ E
Sbjct: 399 FQTDTNQEWRMYTAGRPLRGIMAR-TDPNTQ--------EVQFKGRLVMMGYLKMPAETA 449
Query: 227 HSV 229
++
Sbjct: 450 STI 452
>gi|330799416|ref|XP_003287741.1| hypothetical protein DICPUDRAFT_55031 [Dictyostelium purpureum]
gi|325082250|gb|EGC35738.1| hypothetical protein DICPUDRAFT_55031 [Dictyostelium purpureum]
Length = 972
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 129/242 (53%), Gaps = 27/242 (11%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y +V +K+ + LG+ + +IGFN+PEW + LGAI++ G+YTT+SP
Sbjct: 137 QQYRNDVIAASKSIISLGVHSRAGINVIGFNSPEWHIAYLGAIHSNALPTGVYTTSSPGQ 196
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDK---------- 310
C + SDA + VED KQLEK L ++ + P +KA+V E DK
Sbjct: 197 CEYFATHSDAQLVFVEDIKQLEKYLSIRDKIPNIKALVIMEPAATTTSDKESTTTADAET 256
Query: 311 --------PG-VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
PG V +W++ M+LG+A + ++ + I ++ TL+YTSGT K VML
Sbjct: 257 PLSMSTKYPGYVYTWEQFMDLGKAIEESEVENHSKNIKPSDLATLIYTSGTTSLPKGVML 316
Query: 362 SHDNITFNAACIIQYFKLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKN 418
+H NI + I Y + AA +IS+LPLSHIA Q V +Y+ M + FA K
Sbjct: 317 THCNILWTVHT-IGYDVVNVAAPQTERIISYLPLSHIAEQIVSLYAPMVFGFPVAFAQKT 375
Query: 419 AL 420
AL
Sbjct: 376 AL 377
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 12/144 (8%)
Query: 67 WKKVTYKLQT-----TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q+ TG+K+ + ++A+ ++ ++K +P Y + + L+ K
Sbjct: 400 WEKIQVKIQSMLSQNTGIKKKLVSWAQKKGVEGGYN-IQKGEKKPRGYGIAKKLVFKKAI 458
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+GLD+C++ S AAPIS E +FL L I +CE +GMSE +G +V P + K VG
Sbjct: 459 YNLGLDQCKLLASAAAPISVETLDFFLGLGISVCEAYGMSELSGPQSVGYPRN-KTGSVG 517
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
+T+ G+ ++ + +GEI ++
Sbjct: 518 KTMKGSDVRVAE-----DGEILVR 536
>gi|300120216|emb|CBK19770.2| unnamed protein product [Blastocystis hominis]
Length = 561
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 111/200 (55%), Gaps = 8/200 (4%)
Query: 228 SVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEK 287
+V IGFN+PE+ + G AGG AG+YTTN ++C + L S+ ICV + KQL K
Sbjct: 4 TVTFIGFNSPEYHFGLHGTWLAGGITAGIYTTNKEDSCKYVLSHSETVICVCQSGKQLSK 63
Query: 288 ILKVKAQCPKLKAIVQYEGKPDKPGV-------ISWDELMELGRAAPDESLDRVLETIAT 340
IL ++ Q PKLK IV Y P SW++ ++LG P + ++ + +
Sbjct: 64 ILAIRDQLPKLKIIVSYWQDELLPIFHDGFALCYSWEDFLKLGMDVPSKIIEDRINCVVP 123
Query: 341 NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTV 400
C T++YTSGT G K VM SHDN T+NA + F L ++ FLPL+H+AAQ V
Sbjct: 124 GSCATIIYTSGTTGDPKGVMCSHDNCTYNALAVKDVFGL-CGVERMVGFLPLNHVAAQYV 182
Query: 401 DIYSVMTVAATLWFADKNAL 420
D + T++ A+ +AL
Sbjct: 183 DCLVFLYNPMTIFMAEPDAL 202
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 16/150 (10%)
Query: 105 EPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECA 164
P+ Y L ++++ +GL ++++ AA ++ + +F SL+IPI ++ G SE
Sbjct: 269 HPFGYWLANEFFFKRIREELGLSAVHIAVASAANLTEDTLHFFASLNIPIMDLLGQSEGT 328
Query: 165 GAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLG 222
T + +K+ VG PG VD + EI + R V +LK
Sbjct: 329 APVTTCTNVNQLWKMGTVGLPFPG-----VDVTINSDSEIMYRG-----RNVMMGYLKQP 378
Query: 223 LERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
E + ++ GF D+G++ GF
Sbjct: 379 EETFKAIDNDGF----LHTGDMGSMDKDGF 404
>gi|302343061|ref|YP_003807590.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
gi|301639674|gb|ADK84996.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
Length = 616
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 125/221 (56%), Gaps = 8/221 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +EY VR VA F LGL V IIG N PEW Y+DLG + AGG + G+YTTN
Sbjct: 50 DVSWREYGQTVRDVAMGFCALGLRPGEVVAIIGDNCPEWLYADLGCMSAGGVSVGIYTTN 109
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV--QYEGKPD--KPGVISW 316
S + C + L S+ I +VE+++QL+K L+V+ C +K IV EG + P VIS+
Sbjct: 110 SADECAYILKHSETKIYIVENEEQLDKALEVRDDCTDMKKIVVIDTEGLRNFSDPMVISF 169
Query: 317 DELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
++L+ LG+ ++ +R L + ++ L+YTSGT G K MLSH+N+ + + +
Sbjct: 170 EQLIALGKEHDAKNPGLFERRLASRKPDDLALLIYTSGTTGPPKGAMLSHENVLWTSKAM 229
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWF 414
++ S ISFLPLSHIA + + + T+ F
Sbjct: 230 STAQEILQDDES-ISFLPLSHIAERNFSTFMPLIFKNTVNF 269
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
TY L + + K+K+ +G +R RV++SGAAPIS ++ +++ ++ IP+ +V+G +E G
Sbjct: 344 TYALAHFAVFRKLKERLGFERMRVAISGAAPISADVLKFYHAIGIPLRQVYGQTEDTGPT 403
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ D + D VG IPG Q KI + +GEI +K
Sbjct: 404 SMHQDDIIEADNVGPAIPGVQIKIAE-----DGEILVK 436
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q ID+ N ++++ ++I+KF LP GE+ PTMK+KR + K Y +I
Sbjct: 553 EVVELVQQEIDKVN-ETLARVEQIKKFTILPKKLMEEDGEVTPTMKLKRKAINKAYSEMI 611
Query: 481 DKFY 484
+ Y
Sbjct: 612 EAMY 615
>gi|323454895|gb|EGB10764.1| hypothetical protein AURANDRAFT_52722 [Aureococcus anophagefferens]
Length = 646
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 123/234 (52%), Gaps = 20/234 (8%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y A+V VAKA L LG++ +V IIGFN+PEW ++ +GA+ G G+Y TN P+
Sbjct: 62 YHADVMKVAKALLALGVKERDAVAIIGFNSPEWVFTWIGAVLIGAMGTGIYATNGPDGVA 121
Query: 267 HCLVTSDANICVVEDDKQLEKILKVK-AQCPKLKAIVQY---EGKPDKPGV---ISWDEL 319
+ + S A + V E KQL K +V A+ + A V Y E P G ++W
Sbjct: 122 YVVEHSKAKVVVAEGAKQLAKFREVDAARLASVLAFVAYLPEEATPAPIGSAQGMNWAGF 181
Query: 320 MELGRAAPDESLDRVLETIATNECC-----------TLVYTSGTEGASKPVMLSHDNITF 368
+ G D+ ++ + +CC TL+YTSGT G K VM+SHD++T+
Sbjct: 182 LASGAGVSDDDVEAKAGAVVAGQCCSLISGQQKGDSTLIYTSGTTGNPKAVMISHDSLTW 241
Query: 369 NA-ACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
A I FK S V+S+LPLSHIA Q +D+ + + TL FA +ALK
Sbjct: 242 TAHVGFIDVFKCTSEE-HVLSYLPLSHIAGQMMDVVAPILTGCTLHFARPDALK 294
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYT--YRLVRWLILSKVKQAMGLDRCRVSLSGA 136
+K +A +AK Y A E+ +P LV I K+K A+GLDRCR+ +GA
Sbjct: 333 MKDKVATFAKGCGAAKYAA-AEQGDPDPNNCMANLVAGSIFGKIKGALGLDRCRLFATGA 391
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQT 189
API+T+L +YF SLDI I E+FGMSE G +S D+F++ G IPGT+T
Sbjct: 392 APITTDLLKYFGSLDINILELFGMSEVTGPTNMSTADNFRVGKCGLQIPGTET 444
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 424 KATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKF 483
K + + +AN +IS AQ +QKF LP DF+ EL PTMK+KR V++KY ++
Sbjct: 586 KMIEDGLKKANANAISRAQNVQKFAILPVDFTQEGNELTPTMKLKRKVVLEKYADVVAGL 645
Query: 484 Y 484
Y
Sbjct: 646 Y 646
>gi|392412627|ref|YP_006449234.1| AMP-forming long-chain acyl-CoA synthetase [Desulfomonile tiedjei
DSM 6799]
gi|390625763|gb|AFM26970.1| AMP-forming long-chain acyl-CoA synthetase [Desulfomonile tiedjei
DSM 6799]
Length = 611
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 8/223 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I EY VR + LGLE +IG N PEW Y+DLG + AGG G+YTT+
Sbjct: 44 DITWAEYRQKVRHTCLGLVALGLEHGDRAAVIGENRPEWLYADLGTVAAGGVTVGIYTTS 103
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISW 316
+ + C + V S + + ED++QL+K+L + + P LK IV + K K P VI++
Sbjct: 104 AAQQCEYVTVHSSSKFFIAEDEEQLDKVLFFRDRAPDLKKIVVIDPKGLKRFSDPMVITF 163
Query: 317 DELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+EL+E+GR+ ++ D ++ +E ++YTSGT G K MLSH NI + + I
Sbjct: 164 EELLEIGRSLDEKEPTRFDDLVRATRPDELALIIYTSGTTGPPKGAMLSHSNIVWTSWSI 223
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ + ++SFLPLSHIA + ++ + T+ F +
Sbjct: 224 GEAIPMFPDD-EMVSFLPLSHIAERMFTVFLPLRFGYTVNFVE 265
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+ K+++ +G +R R+++SGAAPIS ++ RYF S+ +P+ EV+G +E +G +
Sbjct: 346 VFYKLRERLGFERVRMAVSGAAPISPDVLRYFHSIGVPMREVYGQTEGSGPTCIHQGGVI 405
Query: 176 KLDGVGRTIPGTQTKIVDPDEEG-----NGEICLKEY---EANVRTVAKAFLKLG 222
+L VG +PG + +I DE+G G I + + EA T+ + +L+ G
Sbjct: 406 ELGNVGPPLPGVEVRI---DEDGEILVKGGNIFMGYFRNPEATAETLTEGWLRSG 457
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K++S +K++KF +P GE+ PTMKVKR ++ + Y +I Y
Sbjct: 561 KALSKVEKVKKFTIVPKKLYEEDGEVTPTMKVKRKYINEIYADLIKAMY 609
>gi|348681530|gb|EGZ21346.1| hypothetical protein PHYSODRAFT_329312 [Phytophthora sojae]
Length = 640
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 124/234 (52%), Gaps = 19/234 (8%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y + A+A + +G++ + +V +G N P+W ++ +G + AG AG+Y T++ EA
Sbjct: 64 QQYYDASKQFARALIHVGVQPHEAVNGLGNNCPKWLFAYMGTVLAGAVIAGIYGTSNAEA 123
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-----------------EGK 307
C + + + VV +QL K L V Q PKLKA+V + +G+
Sbjct: 124 CQYVSAHCETKVVVVSYKEQLTKYLSVLDQLPKLKALVVWNEIDQHLTWESSAISLADGR 183
Query: 308 PDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNIT 367
P + ++ E ++LG LD + CC+LVYTSGT G K M+SHDN+T
Sbjct: 184 PRH--IYAFSEFLKLGDQVEASVLDERMAAQQPGHCCSLVYTSGTTGPPKAAMISHDNLT 241
Query: 368 FNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ A + A +SFLPLSH AAQ +DI+ +++ + ++FA NAL+
Sbjct: 242 WITAAALNAHPEAREAKRSVSFLPLSHSAAQLLDIHVPLSIGSEVYFAGPNALR 295
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 78 GVKRWIANYAKSTSLQHY--MAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSG 135
G+K+ + +A TS+ + Y Y + +L+LSK++ A+GLD C L+G
Sbjct: 334 GIKKSLLEWATGTSVTYLDQTQYGSTPTGFGLRYSITDYLVLSKIRYALGLDECTTFLTG 393
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD 195
AAP S E+ R+F SL+I + E++G +E G T S P +KL VG + GTQ +I DP
Sbjct: 394 AAPTSLEVMRFFQSLNIQLYELYGQTESTGPLTFSMPGTWKLGSVGPPLEGTQARI-DP- 451
Query: 196 EEGNGEI 202
GEI
Sbjct: 452 --ATGEI 456
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ RAN ++ S AQ +QKF +P DFSI +L PTMKVKR V + YQ I+K Y
Sbjct: 583 GMARANTRAASRAQHVQKFFIIPRDFSIGGNQLTPTMKVKRSVVEETYQQDIEKMY 638
>gi|330793929|ref|XP_003285034.1| hypothetical protein DICPUDRAFT_148872 [Dictyostelium purpureum]
gi|325085061|gb|EGC38476.1| hypothetical protein DICPUDRAFT_148872 [Dictyostelium purpureum]
Length = 625
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 118/238 (49%), Gaps = 17/238 (7%)
Query: 199 NGEI---CLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NGE+ KEY+ N+ VAK+ LK+ L +Y SV I +N PEWF+ G I++ G
Sbjct: 47 NGELEEWTYKEYKENIYRVAKSLLKMQLTQYSSVNINSYNNPEWFFIFFGCIFSKYLPTG 106
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV----------QYE 305
+Y T+SP C S++ I VED+ +L +++K PK KAI+ Y
Sbjct: 107 IYCTSSPSQCQTSFNESNSEIVFVEDEDRLNNYIEIKDDIPKCKAIILMESLGGEKKNYS 166
Query: 306 GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDN 365
P K V W E +E+G D +D + +I + + ++TSGT K M+SH N
Sbjct: 167 ELPFK--VYHWSEFLEIGNDINDTEIDEISASIKNEDLASFIFTSGTTSKPKLCMISHKN 224
Query: 366 ITFNAACIIQYF--KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
IQ F + IS+LPLSHIA Q + + + + F D+NALK
Sbjct: 225 YVSIGYYGIQLFVGNADYGEYVFISYLPLSHIADQITTLVIALMSQSCVIFGDRNALK 282
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 71/131 (54%), Gaps = 15/131 (11%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ +G+K++I N+A + L HY +K+ S+ Y+L L+ + + +G + ++ +
Sbjct: 317 KASGLKKFIINWAMNVGL-HY----KKSSSQ---YKLAEKLVFKNIYEKIGFNNIKIVAT 368
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G+AP+S +F S+ I I +G+SE G + +P +F+L G+ G + KI +
Sbjct: 369 GSAPLSKNTNNFFKSIGISIGNTYGLSETTGCSVIESP-EFRLGSCGKVNNG-EIKIAN- 425
Query: 195 DEEGNGEICLK 205
+GE+ LK
Sbjct: 426 ----DGEVLLK 432
>gi|158523016|ref|YP_001530886.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
gi|158511842|gb|ABW68809.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
Length = 607
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 122/221 (55%), Gaps = 5/221 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I +EY R +A A + +GLE+ V IIG N PEW D+G AGG A G+YTTN
Sbjct: 45 DISWQEYYDTARAIACALVDMGLEKGDRVAIIGDNCPEWVMIDMGIQCAGGVAVGIYTTN 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISW 316
+ + + + ++A VE+++QL+K L + P LK ++ ++ K P V+++
Sbjct: 105 AWQEVEYVINHAEARFFFVENEEQLDKWLSFRENAPSLKKVIVWDTKGLREFSDPMVMAY 164
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
D L++ GRA +D + + + C L+YTSGT G K ML+H N+T+ A I Q
Sbjct: 165 DRLVKAGRAMDTAVVDARMAELRPEDLCVLIYTSGTTGMPKGAMLTHGNVTWMAHAIEQQ 224
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
++++ V+SFLPL HI + +++ + + F +K
Sbjct: 225 NRIDNKD-EVLSFLPLCHIFERLFSVFAHIRHGYVVNFVEK 264
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+ K+K+ +G DR RV+ SGAAPIS E+ R + ++ + + E +G +E G S +
Sbjct: 344 VFRKLKKRLGFDRLRVAYSGAAPISPEMLRAYQAIGVRLIEGYGQTEGTGVTCTSQLERV 403
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K VGR +PG Q +I + +GEI +K
Sbjct: 404 KFGTVGRPLPGCQVRIAE-----DGEILVK 428
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
++ + Q +D N K+++ + I+KF +P GE+ PTMKVKR V + + ++I
Sbjct: 545 QIKQLIQHEVDEVN-KTLARVENIRKFSIIPKKLYQEDGEVTPTMKVKRKKVYEAFSNLI 603
Query: 481 DKFY 484
+ Y
Sbjct: 604 EAMY 607
>gi|330793927|ref|XP_003285033.1| hypothetical protein DICPUDRAFT_148871 [Dictyostelium purpureum]
gi|325085060|gb|EGC38475.1| hypothetical protein DICPUDRAFT_148871 [Dictyostelium purpureum]
Length = 645
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 118/229 (51%), Gaps = 11/229 (4%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
E++ +V AK+ L LGL V I +N PEW S GA A +G+YTT+S
Sbjct: 69 FSEFKTDVYKCAKSLLTLGLTSGCGVNINSYNNPEWVISYYGAAIARFVPSGIYTTSSSS 128
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS-------- 315
C + L +S I VED+++L++ L++K Q P K IV E D + S
Sbjct: 129 QCEYFLRSSKGEIVFVEDEERLKRYLEIKDQIPYCKTIVLMESIYDSDEIYSSSPFKVYK 188
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
W++ +ELG DE++D + TI ++ TL++TSGT K M+SH NI + I
Sbjct: 189 WNDFLELGTDISDETIDNICSTIKPDDTLTLIFTSGTTSLPKACMISHKNIVSLSIRCIN 248
Query: 376 YFKLESAAL---SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ L +V+S+LPLSHIA Q + S + F D+NALK
Sbjct: 249 VVLVPGEILNQGNVVSYLPLSHIAEQMFSLISCNIYGIKVTFGDRNALK 297
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
Q TG KR++ ++A L + +EK ++++ L+ K+ +++GL+ + S+S
Sbjct: 332 QITGAKRYLIDWAMRVGLDN-AKRMEKGEKTTLSFQIANALVYKKILKSIGLENVKRSIS 390
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GAAPIS +F SL+ + +G+SE G + P KL GR I G Q+KI
Sbjct: 391 GAAPISNNTLEFFASLNNRVYNCYGLSETTGPCVMGIPIP-KLSSCGRVIDG-QSKIAQ- 447
Query: 195 DEEGNGEICLK 205
+GEI L+
Sbjct: 448 ----DGEILLR 454
>gi|108760849|ref|YP_631712.1| long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK 1622]
gi|108464729|gb|ABF89914.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK
1622]
Length = 618
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 2/212 (0%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY VR A LG+ V I+ FN EW +DL AI GG G+YTT++PE
Sbjct: 51 EYAQRVRRFALGLHALGVGAGQPVGILSFNREEWHVADLAAIAMGGVPVGLYTTSAPEQL 110
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP-GVISWDELMELGR 324
+ L +A + VVE+++ L L ++ + PKL+ +V + P GV+ + ++M LG
Sbjct: 111 EYILGHCEATLLVVENERHLRTALALRERLPKLRHVVVIDAPTVLPEGVLRYADVMALGT 170
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL-ESAA 383
A ++ + + TL+YTSGT G K VMLSH N+ + A + + AA
Sbjct: 171 GADEKPYWDSVHALKPEAMGTLIYTSGTTGHPKGVMLSHHNLVWTAKQLTDSVTFGQPAA 230
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
S++S+LPLSHIA Q + +YS + ++FA
Sbjct: 231 SSLVSYLPLSHIAEQIISLYSPLLNGVQVYFA 262
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLILSKVKQAMGLDRCRVSLSG 135
KR + +A+ + + + + ++ S P T Y L R L+ + +K+ +G++R +
Sbjct: 305 KRRVVAWARRVASERHERVM-RHQSVPMTLEAQYLLARRLVFAPLKERIGMERVSFFATA 363
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD 195
AAP+ E+ +F S+D+ I EV+GM+E G TVS +L VGR + G + +I D
Sbjct: 364 AAPVGREVLDFFASIDMVIHEVWGMTEVTGPGTVSTESHTRLGSVGRAMMGVELRIADDG 423
Query: 196 E--EGNGEICLKEY---EANVRTVAKAFLKLG 222
E G +C+ Y EA +A +L G
Sbjct: 424 ELLVRGGNVCMGYYKNPEATAELLADGWLHSG 455
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 395 IAAQTVDIYSVMTVA-ATLWFADKNAL----KVYKATQAAIDRANLKSISNAQKIQKFEF 449
+A T+D+ +A A W D L ++ + Q ++R +S + I++F
Sbjct: 513 VALLTLDVEKARALAKAQGWPEDAARLAEDARLRQFLQERVERDVNPKLSRFETIKRFAV 572
Query: 450 LPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
LP DFS+ GEL P + V+R V +KY +++ YD
Sbjct: 573 LPKDFSVEGGELTPKLSVRRNVVAEKYAGLVESLYD 608
>gi|218777926|ref|YP_002429244.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218759310|gb|ACL01776.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 605
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 120/224 (53%), Gaps = 8/224 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I +EY R + LGLE+ V II N PEW +SD+GA+ AGG + G+Y T+
Sbjct: 40 KITWREYGQKARYAGLGLISLGLEKGDRVTIISENNPEWLFSDMGAMCAGGISVGIYPTD 99
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV--QYEG--KPDKPGVISW 316
SP+ + L A + ED++QL+K+L+V+ + P LK I+ EG + +S+
Sbjct: 100 SPQQVEYVLNHCQAKFYIAEDEEQLDKVLEVRERTPHLKKIIVMDMEGLRHFEDDMCMSF 159
Query: 317 DELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
D+L+ELG+ +E+ ++ L + L+YTSGT G K M++H NI N +
Sbjct: 160 DDLLELGKKMDEENPLLFEQRLREPQPEDTAILIYTSGTTGPPKGAMITHSNI-LNTMDM 218
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
V+SFLPL HIA +TV +++ + + F ++
Sbjct: 219 QNEVNAGDETDEVLSFLPLCHIAQRTVSVFAPLLTGGRINFVEE 262
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L W +L +K+ +GL+R R +SGAAPIS +L +++ L + I EV+G +E G T
Sbjct: 335 FKLADWAVLRNLKKVIGLNRARYCMSGAAPISPDLLKFYHGLGLDIREVYGQTENCGPTT 394
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V K VG+ +P Q KI + +GEI LK
Sbjct: 395 VHYSGHVKFGTVGQPLPRAQVKIAE-----DGEILLK 426
>gi|320166443|gb|EFW43342.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 715
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 8/223 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EY + VAK + GLE + +V I G N+PEW + + G ++AGG G+Y +SP+A
Sbjct: 73 REYYDQAQVVAKGVIGCGLEPFRTVAIYGANSPEWLFINSGTLFAGGIPTGVYGASSPKA 132
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP----GVISWDELM 320
+ L S+ I VE + L + ++ + P ++ +VQY G+ ++ V+SWD+
Sbjct: 133 VWYQLKHSETAIVFVETTEHLRVLKRIIPRLPDVRIVVQYRGQIEETCEGVPVLSWDQF- 191
Query: 321 ELGRAAPDESLDRVLE--TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LGR LD + + C +YT+GT G VMLSHDN+ + A +
Sbjct: 192 -LGRGKDVRELDVRIRCGNLVPGNCAGYLYTAGTTGNPMAVMLSHDNLVWTARQLAHKVM 250
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
S ++S LPL +A+Q DIY + A ++FA AL+
Sbjct: 251 RASVQDRIVSCLPLCFVASQLTDIYVPLVSGAAVYFAPPEALR 293
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 103 VSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSE 162
VS+ RLV L + + ++ GL +CRV+ AAP+ST+ ++ +SLDI + EVFG++E
Sbjct: 408 VSKGLFGRLVDSLWVKEFREHAGLAKCRVAACCAAPLSTDALQFMMSLDIIVDEVFGLTE 467
Query: 163 CAG--AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEI 202
G AHT GR + GT+ K+ + D+ NGEI
Sbjct: 468 STGPAAHTFGLRS--AAGSSGRPLIGTEFKLTNRDKARNGEI 507
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 390 LPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEF 449
LP + +T +I + + N KV + + R +S+S AQ ++K+
Sbjct: 611 LPYETLTRETQEILAEQGIRCRTSSEAVNDRKVQEFINVCMRRTIERSVSRAQAVKKWTI 670
Query: 450 LPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
L DFS+ GELGPT K+KR + KY I++ Y
Sbjct: 671 LAQDFSVAGGELGPTHKLKRRVIESKYVHEIERMY 705
>gi|66826383|ref|XP_646546.1| hypothetical protein DDB_G0270106 [Dictyostelium discoideum AX4]
gi|60474466|gb|EAL72403.1| hypothetical protein DDB_G0270106 [Dictyostelium discoideum AX4]
Length = 974
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 38/254 (14%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y V K+ L LG+ V IIGFN+PEW + LGAI+ G+YTT+SP
Sbjct: 113 QQYRNEVLMAGKSILSLGVHSRSGVNIIGFNSPEWHIAYLGAIHCNALPTGVYTTSSPSQ 172
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPG--------- 312
C + SDA I ED QL K + ++ + P +KA + + G+ D+
Sbjct: 173 CEYFATHSDAQIVFCEDVTQLNKYISIRDKLPNIKACIIMDPVPGQVDESSGKESETTTA 232
Query: 313 ------------------------VISWDELMELGRAAPDESLDRVLETIATNECCTLVY 348
V +W++ MELG+ + L++ + I N+ TL+Y
Sbjct: 233 DAGSSKAATTTVTPATMAHRYQGFVYTWEQFMELGKNIENSELEKHSKLIKPNDLATLIY 292
Query: 349 TSGTEGASKPVMLSHDNITFNAACI-IQYFKLESAALS-VISFLPLSHIAAQTVDIYSVM 406
TSGT K VML+H N+ + I +++ +IS+LPLSHIA Q V +Y+ +
Sbjct: 293 TSGTTSLPKGVMLTHSNVLWTVHTIGYDVVNIDAPHTERIISYLPLSHIAEQIVSLYAPI 352
Query: 407 TVAATLWFADKNAL 420
+ FA+K AL
Sbjct: 353 VFGFPVSFAEKTAL 366
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 81/144 (56%), Gaps = 12/144 (8%)
Query: 67 WKKVTYKLQTT-----GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q+ G+ + I ++A+ ++ ++K P Y + L+ KV
Sbjct: 389 WEKIQVKIQSLLAQKGGIGKKIVSWAQKKGVEGGYK-IQKGEKRPMGYGIANALVFKKVI 447
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+ +GL++C++ S AAPIS + +FL L I +CE +GMSE +G +V P + + VG
Sbjct: 448 KNLGLEQCKLLASAAAPISIDTLEFFLGLGITVCEAYGMSELSGPQSVGYPLN-RTGSVG 506
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
+T+ G++ IVD D GEI ++
Sbjct: 507 KTMQGSEV-IVDSD----GEILVR 525
>gi|254428952|ref|ZP_05042659.1| AMP-binding enzyme, putative [Alcanivorax sp. DG881]
gi|196195121|gb|EDX90080.1| AMP-binding enzyme, putative [Alcanivorax sp. DG881]
Length = 604
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 135/288 (46%), Gaps = 17/288 (5%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y R + A L LGLER V I+ + EW Y DLG AGG + G+YTT+SPE
Sbjct: 50 DYYEKARAIGVALLSLGLERGQPVSILSEDNKEWLYCDLGIAGAGGISNGVYTTDSPEQL 109
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELME 321
+ + S++ VE+D+QL+K L V+ Q P LK ++ Y+ K D P V+ DEL
Sbjct: 110 AYLINDSESAFLFVENDEQLDKYLTVRDQVPTLKKVIVYDRKGLRDFDDPMVMFLDELYA 169
Query: 322 LGRAAPD--ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
LG PD E + ++ L+YTSGT GA K M+SH N+ F A Q
Sbjct: 170 LGEQIPDAEEQFSTCIAQSQPDDIRMLIYTSGTTGAPKGAMISHRNVLFQLAAGEQVLDA 229
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNALKVYKATQAAIDRA 433
+ FLPL HI + V + + T+ FA+ +N +V T AA+ R
Sbjct: 230 HEDD-DQLCFLPLCHILERLVSVELPIYKGCTVNFAESPETVFENLREVSPHTFAAVPRL 288
Query: 434 NLKSISNAQKIQK----FEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
K S+ ++ F D ++ GE + P +YQ
Sbjct: 289 WEKVYSSMMTLRDEATGFGRWCFDRAVAAGEAWHCDGKRNPLSALQYQ 336
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 11/144 (7%)
Query: 67 WKKV-----TYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+KV T + + TG RW + A + + + ++N Y+ L+L V+
Sbjct: 289 WEKVYSSMMTLRDEATGFGRWCFDRAVAAG-EAWHCDGKRNPLSALQYQFWNLLVLRNVR 347
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+G++R R +GAAPI+ E R+F SL +P+ E +GM+E G ++++ K+ VG
Sbjct: 348 DLIGMNRLRRGTTGAAPIAPEQIRWFQSLGVPLFEGYGMTETTGVASLNSAKREKVGTVG 407
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
+PGT+ +I D NGE+ ++
Sbjct: 408 EALPGTEVRIAD-----NGEVLVR 426
>gi|115378615|ref|ZP_01465767.1| long-chain fatty-acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|310821293|ref|YP_003953651.1| long-chain-fatty-acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|115364365|gb|EAU63448.1| long-chain fatty-acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|309394365|gb|ADO71824.1| long-chain-fatty-acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
Length = 598
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 1/212 (0%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y VR A LG ++ I+GFN EW +DL A+ GG G+YT +S E
Sbjct: 33 DYALRVRRFALGLRGLGFSARGTLGILGFNREEWLVADLAAMALGGVPVGLYTNSSVEQL 92
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP-GVISWDELMELGR 324
+ L +A + +VE++ L+ L ++ + P+L+ ++ E P GV+S+ +++ G
Sbjct: 93 EYILGDCEAEVLLVENEAFLKSALVLRERLPRLRHLIVMEAPERLPEGVLSYQDVLGRGM 152
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ ++ ++ TL+YTSGT G+ K VMLSH N+ + A+ ++Q +
Sbjct: 153 GVDEGPYWDAVQALSPEALATLIYTSGTTGSPKGVMLSHRNLVWTASAVLQEADFQVKPT 212
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++S+LPLSHIA Q + ++ + A ++FAD
Sbjct: 213 RILSYLPLSHIAEQVLSLHGPLVAGAQVYFAD 244
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 40/257 (15%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPY---TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
V++ + +A+ + +++ L+ P+ YRL R + + + +GLD+ ++
Sbjct: 285 VRQRVLAWARGAAAEYHARMLQGERVSPWLEAQYRLARRAVFAPLHAGIGLDQAEFLVTA 344
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD 195
AAPI E+ +F S+D+ + EV+G SE G T++ + +L VGR + G + +I +
Sbjct: 345 AAPIGREVLDFFASIDLIVREVYGSSELTGPATLNTREATQLGSVGRPLMGVEMRIAEDG 404
Query: 196 EE--GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
E G +C+ Y+ + T LK G W ++ D+G + A GF
Sbjct: 405 ELLIRGGNVCMGYYKNDEATA--ELLKDG----------------WLHTGDVGVLDAEGF 446
Query: 253 -------------AAGMYTTNSP-EACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKL 298
+ G T + EA L + + + E K L +L + +
Sbjct: 447 THITGRKKEIIVTSGGKKTAPANIEALLKTVAPVSHAVVIGERRKYLVALLTLDPKAA-- 504
Query: 299 KAIVQYEGKPDKPGVIS 315
+A+ Q +G P++P ++
Sbjct: 505 RALAQEKGWPEEPRALA 521
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 413 WFADKNAL----KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVK 468
W + AL ++++ + A+ R +S + I++ LP DFS+ +GE+ PT+KV+
Sbjct: 513 WPEEPRALAAEPRLHQYLEQAVAREVNPKLSRFETIKRIAILPEDFSVESGEMTPTLKVR 572
Query: 469 RPFVVKKYQSIIDKFY 484
R V +K+ ++I+ Y
Sbjct: 573 RQAVEQKHAALIESLY 588
>gi|330793931|ref|XP_003285035.1| hypothetical protein DICPUDRAFT_148873 [Dictyostelium purpureum]
gi|325085062|gb|EGC38477.1| hypothetical protein DICPUDRAFT_148873 [Dictyostelium purpureum]
Length = 632
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 9/225 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y+ +V VAK+ LK+GL + SV I +N+PEW + L ++ G+YTT SP C
Sbjct: 58 QYKEDVFKVAKSILKMGLGQGSSVNINCYNSPEWTITFLACVHIKTPPCGVYTTLSPSQC 117
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG-------VISWDE 318
+ TS A + VED+++L+K +++K PK KAIV E D+ V +W E
Sbjct: 118 QYLFNTSLAEMVFVEDEEKLKKYIEIKDDIPKCKAIVIMEPSSDEVDYSALPFKVYNWKE 177
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ELG PD ++ + TI+ + T+V++SGT K +L+H N I F
Sbjct: 178 FLELGSDIPDSEVNDISSTISDQDIATIVFSSGTTSNPKACLLTHRNCICAGLSEINTFF 237
Query: 379 LE--SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
E + + IS+L LSHIA I + ++A + F DKNALK
Sbjct: 238 PEPNTENKTSISYLSLSHIADLLSSIILPLFISAQIIFGDKNALK 282
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 67 WKKVTYKLQT-----TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q+ TG K+++ A L + A N+ YTY LV L+ K+
Sbjct: 304 WEKMQAKIQSEINQLTGFKKFLIGQAMKIGLSNGEAIRSGNLYPSYTYSLVNRLVFKKLL 363
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+ +GLD C + LSGAAP+S + +F S+ I I +G++E GA T +P+ + +G
Sbjct: 364 KTIGLDNCTLYLSGAAPLSKKTIDFFQSIGICIGNCYGLTETTGAVTTESPEG-RYGSIG 422
Query: 182 RTIPGTQTKIV-DPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWF 240
+ I + K+ D + G+ K Y N +A ++ WF
Sbjct: 423 KLIVEGEAKVASDGELLFRGDFIFKGYLGNQDATNEA----------------IDSEGWF 466
Query: 241 YS-DLGAIYAGGFAAGMYTTN 260
++ D+G I GF +Y T+
Sbjct: 467 HTGDIGRIDNEGF---LYVTD 484
>gi|149918122|ref|ZP_01906615.1| putative long-chain-fatty-acid--CoA ligase [Plesiocystis pacifica
SIR-1]
gi|149821127|gb|EDM80533.1| putative long-chain-fatty-acid--CoA ligase [Plesiocystis pacifica
SIR-1]
Length = 602
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 5/199 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
K+Y A R V KA + LG E V I+G N PEW +++ G + A G A +Y T++ E
Sbjct: 41 KDYWATAREVGKALISLGHEPGECVAIVGDNRPEWVFAEFGIMAAAGIVAPIYQTSTEEQ 100
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP----GVISWDELM 320
+ L S A I + + QLEK + A P A+ ++ D P V+++ +L+
Sbjct: 101 VAYILGHSKARIAICDQRAQLEKFMAAAASSPDTVALERFILMDDDPIDDERVLNFKDLL 160
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-L 379
++GRA D ++D +E++ + L+YTSGT G K V L H N+T A +++++ +
Sbjct: 161 QMGRAVDDSAVDARIESVKADSVALLIYTSGTTGVPKAVQLDHGNMTSVAYGALEFYREI 220
Query: 380 ESAALSVISFLPLSHIAAQ 398
+ IS+LPLSH+A Q
Sbjct: 221 DDDNYRAISYLPLSHVAEQ 239
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEK----NVSEPYTYRLVRWLILSKVKQAMGLDRCR 130
+ TG ++ + +A++ Q + A+ K + + L R L++SKVK+ +GL
Sbjct: 294 EATGFRKRLVEWARA---QEFAAFEHKVRTGQDKQGFMLNLARKLVISKVKERLGLQNLV 350
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK 190
++ +GAAPIS + SL I I E FGMSE +GA T S ++ VGR +PG Q K
Sbjct: 351 LAATGAAPISVGTLEFMASLGIVIHEGFGMSETSGAITGSPLYRPRVGWVGRALPGVQIK 410
Query: 191 IVDPDEEGNGEICLK 205
I D +GEICLK
Sbjct: 411 IAD-----DGEICLK 420
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+D+ ++ ++I+KF LP +FS+ TGEL PTMKVKR V +K+ + I +
Sbjct: 546 GVDKDVNPELARYEQIKKFTVLPNEFSVDTGELTPTMKVKRNVVNEKFAAQIKAMF 601
>gi|297297023|ref|XP_002804950.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like [Macaca
mulatta]
Length = 639
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 2/124 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+S
Sbjct: 133 ISYSQYYLLARRAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTSS 192
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDK-PGVISWDEL 319
PEAC + AN+ +V+ KQLEKILKV Q P LKA+V Y E P+K V + +E
Sbjct: 193 PEACQYIAYDCCANVIMVDTQKQLEKILKVWKQLPHLKAVVIYKEPPPNKMANVYTMEEF 252
Query: 320 MELG 323
MELG
Sbjct: 253 MELG 256
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 295 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 353
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 354 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPCNYRLYSSG 413
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 414 KLVPGCRVKLVNQDTEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 463
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 464 TGDAGRLDADGF 475
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 572 VYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEKYKDIID 631
Query: 482 KFY 484
FY
Sbjct: 632 SFY 634
>gi|338534749|ref|YP_004668083.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
gi|337260845|gb|AEI67005.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
Length = 605
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY VR A LG+ V I+ FN EW +DL AI GG G+YTT++PE
Sbjct: 39 EYAQRVRRFALGLHALGVGPGQPVGILSFNREEWHVADLAAIAMGGVPVGLYTTSAPEQL 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP-GVISWDELMELGR 324
+ L +A + VVE++K L ++ + PKL+ +V + P GV+ + ++M LG
Sbjct: 99 EYILGHCEATLLVVENEKHLRTAQALRERLPKLRHVVVMDAPTVLPEGVLRYADVMALGT 158
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL-ESAA 383
A ++ + + TL+YTSGT G K VMLSH N+ + A + A
Sbjct: 159 GADEKPYWDSVHALKPEAMGTLIYTSGTTGHPKGVMLSHHNLVWTAKQLTDSVTFGRPDA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
S++S+LPLSHIA Q + ++S + ++FA
Sbjct: 219 SSLVSYLPLSHIAEQIISLHSPLLNGVQVYFA 250
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLILSKVKQAMGLDRCRVSLSG 135
KR + +A+ + + + + ++ S P T Y+L R L+ + +K+ +G+DR +
Sbjct: 293 KRRVVAWARHVASERHERVM-RHQSVPMTLEAQYQLARKLVFAPLKERIGMDRVSFFATA 351
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD 195
AAPI E+ +F S+D+ I EV+GM+E G TV+ +L VGR + G + +I +
Sbjct: 352 AAPIGREVLAFFASIDMVIHEVWGMTEVTGPGTVNTEAHTRLGSVGRAMMGVELRIAEDG 411
Query: 196 E--EGNGEICLKEY---EANVRTVAKAFLKLG 222
E G +C+ Y EA +A +L G
Sbjct: 412 ELLVRGGNVCMGYYKNPEATAELLADGWLHSG 443
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 395 IAAQTVDIYSVMTVA-ATLWFADKNAL----KVYKATQAAIDRANLKSISNAQKIQKFEF 449
+A T+D +A A W D L ++ + Q ++R +S + I++F
Sbjct: 501 VALLTLDAEKARALARAQGWPEDAATLAEEPRLRQLLQERVERDVNPKLSRFETIKRFAV 560
Query: 450 LPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
LP DFS+ GEL P + V+R V +KY ++D Y+
Sbjct: 561 LPKDFSVEGGELTPKLSVRRNVVAEKYADLVDSLYE 596
>gi|332265216|ref|XP_003281624.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Nomascus
leucogenys]
Length = 616
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 51/216 (23%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA R AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS EAC
Sbjct: 87 YEA-CRKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAEACQ 145
Query: 267 HCLVTSDANICVVEDDKQLEKILKV-KAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
+ + + NI +VE+D+QL+KIL + ++ LKAI+QY
Sbjct: 146 YVITHAKVNILLVENDQQLQKILSIPQSSLELLKAIIQYR-------------------- 185
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS 385
L N ++ + +G + + FKL +
Sbjct: 186 ---------LPMKKNNNLYSITWMAG--------------------AVAKDFKLTEKHET 216
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 217 VVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 252
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 83/130 (63%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 287 KSTGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHTFIS 346
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GAAP++ E +FLSLD+PI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 347 GAAPLNQETAEFFLSLDVPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 406
Query: 195 DEEGNGEICL 204
+++G GE+CL
Sbjct: 407 NKDGIGELCL 416
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 553 VYKAIQQGINAVNQEAMNNAQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 612
Query: 482 KFY 484
Y
Sbjct: 613 HMY 615
>gi|405375689|ref|ZP_11029715.1| Long-chain-fatty-acid--CoA ligase [Chondromyces apiculatus DSM 436]
gi|397086053|gb|EJJ17197.1| Long-chain-fatty-acid--CoA ligase [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 601
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 116/214 (54%), Gaps = 6/214 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY V+ A LG+ V I+ FN EW +DL AI GG G+YTT+SPE
Sbjct: 33 EYAQRVKRFALGLHALGVGAGQPVGILSFNREEWHVADLAAIALGGVPVGLYTTSSPEQL 92
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP-GVISWDELMELGR 324
+ L +A + VVE++K L L ++ + PKL+ ++ + P GV+ + +++ G
Sbjct: 93 EYILGHCEATVLVVENEKHLRTGLALRERLPKLRHLIVMDAPTTLPQGVLRYADVLAQGA 152
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI---IQYFKLES 381
A ++ + T+ TL+YTSGT G K VMLSH N+ + A + + + ES
Sbjct: 153 GADEKPYWDSVNTLKPEAMGTLIYTSGTTGHPKGVMLSHHNLVWTAKQLTDSVTFGGPES 212
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
++L +S+LPLSHIA Q + ++S + ++FA
Sbjct: 213 SSL--VSYLPLSHIAEQIISLHSPLLNGVQVYFA 244
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 41/228 (17%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
YRL R LI +K+ +G+DR + AAPI ++ +F S+DI I EV+GM+E G T
Sbjct: 319 YRLARRLIFGPLKERIGMDRVTFFATAAAPIGRDVLDFFASIDIVIHEVWGMTEVTGPGT 378
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE--EGNGEICLKEY---EANVRTVAKAFLKLGL 223
V+ +L VGR + G + +I D E G +C+ Y EA +A +L G
Sbjct: 379 VNTEAYTRLGSVGRAMMGVELRIADDGELLVRGGNVCMGYYKNPEATAELLADGWLHSG- 437
Query: 224 ERYHSVCIIGFNAPEWFYSDLGAIYAGGF-------------AAGMYTTNSP-EACLHCL 269
D+G + A GF + G T+ S E L L
Sbjct: 438 -------------------DVGQLDAEGFVQITGRKKDIIVTSGGKKTSPSNIEELLKAL 478
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWD 317
+ + E L +L + A+ K KA+ + +G P+ +++ D
Sbjct: 479 PGVGQAVVLGERRNYLVALLTLDAE--KAKALAKTQGWPEDVALLAED 524
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 395 IAAQTVDIYSVMTVAATLWFADKNAL-----KVYKATQAAIDRANLKSISNAQKIQKFEF 449
+A T+D +A T + + AL +V + Q ++R +S + I++F
Sbjct: 495 VALLTLDAEKAKALAKTQGWPEDVALLAEDARVRQFLQERVERDVNPKLSRFETIKRFAL 554
Query: 450 LPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
LP DFS+ GEL P + V+R V +KY +I+ YD
Sbjct: 555 LPKDFSVEGGELTPKLSVRRNVVAEKYARVIEGLYD 590
>gi|443697328|gb|ELT97844.1| hypothetical protein CAPTEDRAFT_161718 [Capitella teleta]
Length = 468
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 85/130 (65%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
Q TG+K+ +A +AK L+ MA + S+P+ + + ++ KV+Q +GLDRC+ L+
Sbjct: 138 QNTGMKKKVAAWAKGVGLKGNMAIMNGRTSKPFGWTVANAMVFKKVQQGLGLDRCKYCLT 197
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GAAPI+ E +F+SL+IP+ E++GMSE G HT+S P + + VG G TK+ +P
Sbjct: 198 GAAPITRETLDFFMSLNIPLLELYGMSESCGPHTISFPWKYNVTSVGVEFLGVSTKLANP 257
Query: 195 DEEGNGEICL 204
D++G GEIC+
Sbjct: 258 DKDGEGEICM 267
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 329 ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVIS 388
++L+ ++ A N+CCTL+YTSGT G K VMLSHDN+T+ A Q KL +S
Sbjct: 11 DALEARIKAQAPNKCCTLIYTSGTTGNPKGVMLSHDNMTWTANVAGQTAKLLYGEEVALS 70
Query: 389 FLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+LPLSHIAAQ +DIY + A +FA +ALK
Sbjct: 71 YLPLSHIAAQMLDIYMPLFYGAVCYFAQPDALK 103
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 388 SFLPLSHIAAQTVDI-----YSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQ 442
+ LPL + + D TV+ L D V + Q IDR+N +S S AQ
Sbjct: 368 TMLPLDQLTLEAQDWCRQRGSKATTVSEIL---DSKDEAVLRGIQEGIDRSNARSTSRAQ 424
Query: 443 KIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K+QK+ LP DFSIP ELGPT+K+KRP V Y+S I+ FY
Sbjct: 425 KMQKWSILPKDFSIPGDELGPTLKLKRPVVANLYKSTIEAFY 466
>gi|262197854|ref|YP_003269063.1| AMP-dependent synthetase and ligase [Haliangium ochraceum DSM
14365]
gi|262081201|gb|ACY17170.1| AMP-dependent synthetase and ligase [Haliangium ochraceum DSM
14365]
Length = 596
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 8/219 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
K Y A VRT A+A + LG E + FN P W LGA AGG G+Y + S E
Sbjct: 37 KSYAAEVRTAARALMALGFEPGSRTGQLCFNRPAWSIIQLGAQAAGGLGVGIYNSCSAEE 96
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-----EGKP--DKPGVISWD 317
+ ++ I +V+ Q K+ + P+L+ +V E P D P ++SW+
Sbjct: 97 VRYITAHAELEIVLVDSQAQWHKLRAHRDALPRLRHVVMAPDLTPELAPGDDDPLLMSWE 156
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ +E+L++ + I +L+YTSGT G K VMLSH N+ + A+ +Q+
Sbjct: 157 AFLDRAGEVSEETLEQRMAAIQPEHLASLIYTSGTTGQPKGVMLSHQNLAWTASQALQFL 216
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ S +S+LPL+HIA Q + IY +++ + +++A+
Sbjct: 217 E-TSDGDRALSYLPLAHIAEQMLSIYVPVSIGSAIYYAE 254
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 13/147 (8%)
Query: 67 WKK----VTYKL-QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEP---YTYRLVRWLILS 118
W+K V+ +L Q TGVKR + ++A+ + + P YRL R L+L
Sbjct: 278 WEKMHSAVSTRLSQETGVKRHLIDWARGVAARANELANRGQAPGPALALQYRLARHLVLD 337
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
K+K+A+GL++ + GAAPIS E+ YF SLDI I EV+G SE +G T ++ KL
Sbjct: 338 KLKRALGLNQAHLCACGAAPISLEVLAYFASLDIVIHEVYGQSESSGPTTFNSVGKTKLG 397
Query: 179 GVGRTIPGTQTKIVDPDEEGNGEICLK 205
VG I G ++ D +GEI ++
Sbjct: 398 TVGTPIMGVDVELAD-----DGEILVR 419
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
D AL+ A Q+AID N + ++ A+ I+ F + F+ G L PT+K++R V ++
Sbjct: 529 DSQALRA--AVQSAIDEVN-QHLARAETIKTFTIIDEPFTAENGLLSPTLKLRRNAVHER 585
Query: 476 YQSIIDKFYD 485
Y I Y+
Sbjct: 586 YAREIGAMYE 595
>gi|432097277|gb|ELK27611.1| Long-chain-fatty-acid--CoA ligase ACSBG1 [Myotis davidii]
Length = 172
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Query: 196 EEGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
+G+ E I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG
Sbjct: 19 RQGSWERITYAQYYLQARQAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVT 78
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP 308
G+YTT+SPEAC + ANI VV+ KQLEKILK+ P LKA+V Y P
Sbjct: 79 GIYTTSSPEACQYIARDCRANIIVVDAQKQLEKILKIWENLPHLKAVVMYGETP 132
>gi|312116128|ref|YP_004013724.1| AMP-dependent synthetase and ligase [Rhodomicrobium vannielii ATCC
17100]
gi|311221257|gb|ADP72625.1| AMP-dependent synthetase and ligase [Rhodomicrobium vannielii ATCC
17100]
Length = 605
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 2/210 (0%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
+ VR A+A + LG++ +V +IG+N PEW D+ A+ G AG+Y T S +
Sbjct: 50 FRDEVRRAARALVALGVKPGDAVGVIGYNRPEWVIMDIAAMMVGANVAGIYFTASAQDAA 109
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG-KPDKPGVISWDELMELGRA 325
+ + S+ I + E ++ +I + + L+ +V G P ++WD M G
Sbjct: 110 YIIAHSECAIVLAEKEEHFRRIASQREELSHLRHVVMMRGADATDPLQMTWDAFMAQGDD 169
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS 385
D ++R L+ I + L+YTSGT G K V +SHD + AA +++ F++ +
Sbjct: 170 RFDAEVERRLQAIQPKDVGCLIYTSGTTGPPKAVQISHDALAKTAALVLKLFEV-TGNDR 228
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
IS+LPL+HIA + + I+ +TV ++FA
Sbjct: 229 TISYLPLAHIAERILTIHFQITVGNAVYFA 258
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 15/118 (12%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L K K+ +GLDR + GAAPI E R+ LD+P+ E++G+SE AG T +
Sbjct: 339 LFHRKAKRLIGLDRAKHLGVGAAPIPEETLRFMTGLDLPVRELWGLSESAGVGTTNLRGA 398
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICL----------KEYEANVRTVAKAFLKLG 222
K+ VG+ PG KI + +GEI + K+ EA RT +L+ G
Sbjct: 399 TKIGSVGKPYPGLDLKI-----DRDGEILIRGPYMFMGYAKDPEATARTFTDGWLRTG 451
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 399 TVDIYSVMTVAATLWFADKNALK--VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSI 456
T+D + A+ AD AL + + Q I N + S + I++F LP SI
Sbjct: 513 TLDKAAAERFASERGMADGPALTEAIREKIQEGIHAINARH-SRVENIRRFAILPEPLSI 571
Query: 457 PTGELGPTMKVKRPFVVKKYQSIIDKFY 484
G+L PT+KVKR V+ + ++D Y
Sbjct: 572 ENGDLTPTLKVKRQAVMTRLTPVVDSLY 599
>gi|158520331|ref|YP_001528201.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
gi|158509157|gb|ABW66124.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
Length = 597
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 2/202 (0%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR AK+ + L + + V I+ + +W D+ G G+Y +N P C + +
Sbjct: 47 VRQAAKSLIALDVNKQDKVNILSYTCYQWVLCDMAIASCNGVTVGIYQSNLPHDCKYIIN 106
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG-VISWDELMELGRAAPDE 329
SDA + ED KQL+K+L ++A P ++ ++ ++GK G IS+DE + LG+ DE
Sbjct: 107 HSDAVVIFAEDQKQLDKLLSIRADIPNIRKVILFKGKGTGDGWAISFDEFLALGKDVADE 166
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISF 389
L ++ ++ +VYTSGT G K +L+HDN+TF A + + + + F
Sbjct: 167 KLKERIDAAGPSDPAAIVYTSGTTGVPKGAVLTHDNLTFTAQSARECADIHEGDNTFL-F 225
Query: 390 LPLSHIAAQTVDIYSVMTVAAT 411
LPL+H+ A+ +SV+T T
Sbjct: 226 LPLAHVFARLCVYFSVLTGTCT 247
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 15/146 (10%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ Y++ L+ SK++ A+G R R +SGAAP++ ++ ++F + D+ I E GMSE
Sbjct: 323 FKYKIATKLVFSKLQAALG-GRVRWCISGAAPLNPDIAKFFHAADVLILEGLGMSENTSF 381
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERY 226
V+ D+++ VG+ PG + KI + +GE+ + R V K + K+ E
Sbjct: 382 TNVNRVDNYRFGWVGQPGPGIEQKIAE-----DGEVLFRG-----RNVMKEYYKMPEETA 431
Query: 227 HSVCIIGFNAPEWFYSDLGAIYAGGF 252
++ G+ + DLG I GF
Sbjct: 432 KTIAPDGWQST----GDLGEIDDQGF 453
>gi|322800670|gb|EFZ21608.1| hypothetical protein SINV_12902 [Solenopsis invicta]
Length = 279
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 92/143 (64%), Gaps = 7/143 (4%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+Q +K IA +AK+ L +Y L + + Y L +WL+ KVK
Sbjct: 45 WEKIYEKMQEKARSNGTIKTCIAKWAKAQGLSYYTNKLNGVDHKHWGYILAKWLVFDKVK 104
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+G +RC++ ++ AAP+S ++K+YF+SLD+P+ EV+GMSE GA T+++ D ++GVG
Sbjct: 105 AVLGFNRCQLFVTAAAPLSNDIKKYFMSLDMPLLEVYGMSESGGAQTLTSKD--FMEGVG 162
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
R IPG TK+ + +E G GE+C+
Sbjct: 163 RPIPGAYTKLDNINEHGEGEVCM 185
>gi|290979710|ref|XP_002672576.1| long-chain fatty-acid-CoA ligase [Naegleria gruberi]
gi|284086154|gb|EFC39832.1| long-chain fatty-acid-CoA ligase [Naegleria gruberi]
Length = 703
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 26/241 (10%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I KEY +V+ VAK+ L LG++R + CI+ N EW Y DLG + G+Y ++S
Sbjct: 101 ITFKEYNDHVQEVAKSLLALGIKRGETCCIMSGNNKEWNYLDLGCLTVNVICGGIYFSSS 160
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI------VQYEGKPDKPGVI- 314
LH L S+A + VVE EK+ + ++ L+ + V E + P +
Sbjct: 161 ELQVLHLLNHSEAKMVVVEKKDHFEKVKRCISKLTDLQKVVFINESVLNECLKENPEPLL 220
Query: 315 ----------SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHD 364
SW + ++LG + +D + ++I TN+ CT++YTSGT GA K V L++
Sbjct: 221 NASGIQVQLWSWSDFIKLGENITQDQVDEIFKSIKTNDVCTVIYTSGTTGAPKAVQLTYR 280
Query: 365 NI---TFNAACIIQY------FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+ T A I +Y F +E+ + +S LPL+HIA + + IY + ++FA
Sbjct: 281 AVTSATLAARTIAKYNETHPDFDIENHNNTYLSVLPLAHIAERLLTIYIPLRCGYQVYFA 340
Query: 416 D 416
+
Sbjct: 341 E 341
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYR--LVRWLILSKVKQAMGLDRCRVSLSGA 136
V+ I + K S + + + ++ S +R L+ I+ +K+ +G DR RV G+
Sbjct: 383 VRYLIQHCMKQVSKYNTLVAMGRSTSSLLDFRAKLIYKFIVGPLKRKIGFDRTRVFGVGS 442
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
APIS ++ +F LD + ++G SE + + P D VG +PGT+ KI
Sbjct: 443 APISKDVMIFFSGLDAMLINIYGSSESSAMGSSIRPRALHFDSVGVPMPGTEIKI----- 497
Query: 197 EGNGEICLKE------YEANVRTVAKAFLKLGLERYHSVCII--GF 234
+ +GE+ +K Y + ++ AF + G R + I+ GF
Sbjct: 498 DVDGEVLIKAPSTMVGYAKDEKSTKAAFTEDGFLRTGDLGILRNGF 543
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+YK ++ I + N K +S+A++++KF+ L FSI GE T+K KR ++KKY+ ID
Sbjct: 637 IYKLVESLIKQVNSK-VSDAEQVKKFKILSKSFSIDGGEFTATLKTKRHEILKKYEKEID 695
Query: 482 KFY 484
+ Y
Sbjct: 696 EIY 698
>gi|301121692|ref|XP_002908573.1| long-chain-fatty-acid-CoA ligase, putative [Phytophthora infestans
T30-4]
gi|262103604|gb|EEY61656.1| long-chain-fatty-acid-CoA ligase, putative [Phytophthora infestans
T30-4]
Length = 533
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 25/224 (11%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y A+A +++G++ + +V ++G N PEW + +G + AG AG+Y T++ EA
Sbjct: 64 QQYYDTSHQFARALIQVGVQPHEAVNVLGENCPEWLLTYMGTVLAGAVIAGIYGTSNAEA 123
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG-------VISWD 317
C H +A + VV KA+V + D P V S+
Sbjct: 124 CQHISSHCEAKVVVV-----------------SAKALVVWSDN-DAPNDTKYRVPVYSFP 165
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ ++LG +A +++ +E CC+L+YTSGT G K M+SHDN+T+ +
Sbjct: 166 QFLKLGESADVSLVEKRMEAQLPGHCCSLIYTSGTTGPPKAAMISHDNLTWITEAALYAH 225
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
AA +SFLPLSH AAQ +DI+ + + + ++FA +AL+
Sbjct: 226 PEARAAKRSVSFLPLSHSAAQLLDIHVPLVIGSEVYFAGPDALR 269
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNV--SEP----YTYRLVRWLILSKVKQAMGLDRCRV 131
G+K+ + +A ++ AYLE+ S P + + +LILSK++ A+GLD C
Sbjct: 308 GLKKSVLTWA----MERSWAYLEQTQYGSTPSGFGIRFSVADYLILSKIRHALGLDECTT 363
Query: 132 SLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG 179
L+GAAP S E+ R+F SL++P+ E++G +E G T S P + + G
Sbjct: 364 FLTGAAPTSPEVMRFFASLNMPLYELYGQTESTGPLTFSMPSEIQYTG 411
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 419 ALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 478
+LK + + RAN+++ S AQ +QKF +P DFSI EL PTMKVKR V K Y+
Sbjct: 466 SLKTSQYISNGMKRANMRAASRAQHVQKFIIIPRDFSIGGNELTPTMKVKRSVVEKMYKE 525
Query: 479 IIDKFY 484
I+K Y
Sbjct: 526 EIEKMY 531
>gi|323449650|gb|EGB05536.1| hypothetical protein AURANDRAFT_66275 [Aureococcus anophagefferens]
Length = 1112
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 115/221 (52%), Gaps = 13/221 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+ Y AN KA LG V + FN P WF++ +GA+ AG +G+Y TN+ E
Sbjct: 80 EAYHANAVAFGKALTALGGR--GGVAVHAFNEPRWFFAAVGALAAGWTISGVYLTNTYEQ 137
Query: 265 CLHCLVTSDANICVVEDDKQLEKIL-KVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
H L TS + VVE QLE V P+L +V G D V +D + G
Sbjct: 138 SKHILKTSRVRVLVVETRAQLESTYASVLDDFPELVVVVLEGGAVDGDRVFHYDAFVATG 197
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL---E 380
A D +L R+L + + +LVYTSGT G K V L+H++ C + + ++ E
Sbjct: 198 AALDDRALPRMLP---STDVASLVYTSGTTGNPKAVELTHESA--RTVCEMMHARIPLNE 252
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
S L +S+LPLSHIAA +D+YS + AT+ FAD +AL+
Sbjct: 253 STVL--VSYLPLSHIAALGIDVYSAIFCGATVHFADADALR 291
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L + L K+++A GLDRC + +GAAP+S Y S+D+P+ EVFGMSE GA VS
Sbjct: 367 LFKVLAFKKIRKACGLDRCELLYTGAAPLSAATADYLKSVDMPLLEVFGMSESCGAIAVS 426
Query: 171 APDDFKLDGV------GRTIPGTQTKIVDPDEE 197
P LDG GR +P +I PD E
Sbjct: 427 GP----LDGARPAGSCGRPLPNGHCEIA-PDGE 454
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 438 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+S AQ++QK LPA FS+ T EL PTMK+KR FV+ KYQS +D
Sbjct: 570 MSRAQRVQKVSVLPAPFSVETEELTPTMKLKRAFVIAKYQSQVD 613
>gi|103058188|gb|ABF71571.1| AMP-binding enzyme [Bombyx mori]
Length = 397
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
WD+L+E+G PD L+ +L++IA NECCTLVYTSGT G K VMLSHDN+T++A I +
Sbjct: 1 WDQLLEIGAKEPDTQLNEILKSIAVNECCTLVYTSGTVGPPKAVMLSHDNLTWDAFGIGE 60
Query: 376 YFK-LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ L+ ++SFLPLSH+AAQ VDIY+ ++ A T++FA +ALK
Sbjct: 61 RCQNLQPTRDRLVSFLPLSHVAAQVVDIYTTLSNAVTVYFAQPDALK 107
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 50/63 (79%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V+KA +A I RAN +ISNAQK+QKF LP+DFS+ TGELGPT+K+KR V +KY+ II+
Sbjct: 333 VHKAIEAGITRANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKDIIE 392
Query: 482 KFY 484
FY
Sbjct: 393 DFY 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 27/115 (23%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVS----------------- 104
W+K+ K+ G +K+ IA +AK LQ++++ + +S
Sbjct: 129 WEKMYEKIMAVGASSGPLKKQIALWAKEKGLQYHLSRINGALSAGMYGLPIDLTTSEMLW 188
Query: 105 -----EPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPI 154
Y+L + L+ SK+ +++GLD+C ++ AAP+S ++K++FLSLDIP+
Sbjct: 189 FWYEGSSVGYKLAKSLVFSKIHESLGLDKCSTFVTAAAPLSPDIKKFFLSLDIPL 243
>gi|12330998|gb|AAG49398.1| PRTD-NY3 [Homo sapiens]
Length = 479
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 75/107 (70%)
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
SWD+ MELGR+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A +
Sbjct: 9 SWDDFMELGRSIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVT 68
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ FKL +V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 69 KDFKLTDKHETVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 115
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 150 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 209
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 210 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 269
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 270 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 318
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQ+I+K+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 416 VYKAIQQGINAVNQEAMNNAQRIEKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 475
Query: 482 KFY 484
Y
Sbjct: 476 HMY 478
>gi|363582567|ref|ZP_09315377.1| long chain fatty-acid CoA ligase [Flavobacteriaceae bacterium HQM9]
Length = 590
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 116/214 (54%), Gaps = 6/214 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY +++ LK+G++ + II N EW +D+G + G +Y T S E
Sbjct: 38 QEYIDKANQISRGLLKMGVQPNDKIAIISSNNRTEWNITDIGILQTGAQDVPIYPTISEE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S++ V D + +K++K+K Q P L+ + Y+ P+ SW E++ELG
Sbjct: 98 DYQYVLNHSESKFVFVSDQEVYDKVMKIKDQVPSLQKVYSYDAIPN---CSSWKEVLELG 154
Query: 324 RAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+++ + +++++I N+ TL+YTSGT G K VMLSH NI NA + F++E
Sbjct: 155 EDESNQNEVQKIMDSIDENDLATLIYTSGTTGRPKGVMLSHRNIVRNALNSSKRFEVEDG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ H+ + + +Y + +++FA+
Sbjct: 215 NAKALSFLPVCHVYERML-LYLYQYRSISIYFAE 247
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 430 IDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
ID+ N K ++I++FE P ++S+ +G L PT K+KR + + ++ + DK Y
Sbjct: 536 IDKHNAK-FGKWEQIKRFELTPVEWSVDSGHLTPTFKLKRKIIRELHKDLYDKIY 589
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + +A L Y Y + + + R LI SK ++ +G +V SG+
Sbjct: 286 TGLKKKLFFWAIDLGL-IYEPYGQNGAWYEFKLGIARKLIFSKWQEGLG-GNLKVIASGS 343
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDP 194
A + + L R F + I + E +G++E + +V+ D FK+ VG+ + T+ I +
Sbjct: 344 AALQSRLARVFNAAGINVMEGYGLTETSPVISVNDIRDKGFKIGTVGKILDETKVTIAED 403
Query: 195 DE 196
E
Sbjct: 404 GE 405
>gi|442321413|ref|YP_007361434.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus stipitatus
DSM 14675]
gi|441489055|gb|AGC45750.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus stipitatus
DSM 14675]
Length = 605
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY V+ A LG + II FN EW + L ++ GG G+YTT++ E
Sbjct: 39 EYSQRVKHFALGLRSLGYAEGQPLGIISFNREEWHVAALASMAMGGVPVGLYTTSALEQL 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE--GKPDKPGVISWDELMELG 323
+ L +A++ VVE++K L L ++ + PKL+ +V + P GV+ + +++ G
Sbjct: 99 EYILRHCEASLLVVENEKHLRTGLLLRERLPKLRHLVVLDAPATPLPEGVLRYADVLARG 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
A D+ + + TL+YTSGT G K VMLSH N+T+ + + Q
Sbjct: 159 AGADDKPYWDSVNALKPESLGTLIYTSGTTGHPKGVMLSHHNLTWTSRQLSQAVSFGKKP 218
Query: 384 LSVI-SFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++I S+LPLSHIA Q + ++ + + ++FAD
Sbjct: 219 DNIILSYLPLSHIAEQVISLHCPLMLGIQVYFAD 252
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 56/267 (20%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLILSKVKQAMGLDRCRVSLS 134
+KR + ++A+ + + + + +++ P T Y + R L+ +K +G++R +
Sbjct: 293 LKRRLVDWARGVASEMH-SRAQRHERIPVTLSAQYSVARRLVFEPLKTRIGMERVDFFAT 351
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
AAPI ++ +F S+D+ I EV+GM+E +G TV+ + L VGR + G + +I +
Sbjct: 352 AAAPIGRDVLEFFASIDMLIHEVWGMTEVSGPGTVNTEESTHLGTVGRPMLGVEVRIAE- 410
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPE---------WFYS-DL 244
+GEI + R +VC + PE W +S D+
Sbjct: 411 ----DGEILI--------------------RGGNVCTGYYKNPEATAELLQDGWLHSGDV 446
Query: 245 GAIYAGGF-------------AAGMYTT-NSPEACLHCLVTSDANICVVEDDKQLEKILK 290
G + G+ + G T + E L L + V E L +L
Sbjct: 447 GQLDGEGYLHITGRKKEIIVTSGGKKTAPGNIEELLKSLPGVGHAVVVGERRNYLVALLA 506
Query: 291 VKAQCPKLKAIVQYEGKPDKPGVISWD 317
+ + K++A+ + +G P++ GV++ D
Sbjct: 507 LDGE--KVRALAREKGWPEEVGVLAGD 531
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
++++ Q A+DR +S + I++F LP +FS+ G+L PT+KV+R V K+ ++
Sbjct: 533 RLHQVLQQALDRDVNAKLSRFENIKRFAVLPREFSVDEGDLTPTLKVRRKAVELKHAGLV 592
Query: 481 DKFY 484
+ Y
Sbjct: 593 ESLY 596
>gi|224369958|ref|YP_002604122.1| two-component sensory box histidine kinase/response regulator
protein [Desulfobacterium autotrophicum HRM2]
gi|223692675|gb|ACN15958.1| two-component sensory box histidine kinase/response regulator
protein [Desulfobacterium autotrophicum HRM2]
Length = 594
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 2/199 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ K + V+T +K+ + LG+ER V I+ + W +D+ + G G+Y +N
Sbjct: 38 VTWKAFYDGVKTASKSLIALGVERGDKVNILSYTCYNWMLTDVANMSVGAATVGIYQSNL 97
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDKPGVISWDELM 320
P C + + SD + E+ QL+K+ K++ Q ++ ++ + G+ P+ VI++D +
Sbjct: 98 PADCEYIINHSDGVLVFAENQIQLDKLFKIREQISNVRKVILFNGEAPEDDWVITYDTFL 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
LG+ D + ++ + LVYTSGT G K V+L+HDN+T + + Q +
Sbjct: 158 TLGKEISDAVFEERTHSVKPEDTAGLVYTSGTTGVPKGVVLTHDNLTSTSQSVFQSGNFK 217
Query: 381 SAALSVISFLPLSHIAAQT 399
A + FLPL+H+ A+T
Sbjct: 218 -AGEEMFVFLPLAHVFART 235
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y++ L+ SK+ +A+G + +SGAAP++ E+ R+F + + I E GM+E
Sbjct: 325 YQVATRLVFSKIHKALG-GNVKWCISGAAPLNPEIARFFHAAGLLILEGLGMTENTSFSH 383
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKL 221
V+ PD + VG G K+ + +GE+ K R V KA+ K+
Sbjct: 384 VNRPDSYAFGVVGPPGEGLFHKLAE-----DGEVLTKG-----RNVMKAYYKM 426
>gi|301059328|ref|ZP_07200255.1| AMP-binding enzyme [delta proteobacterium NaphS2]
gi|300446557|gb|EFK10395.1| AMP-binding enzyme [delta proteobacterium NaphS2]
Length = 603
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 8/223 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I Y V A + +GLE+ V IIG N PEW D+G AGG A G+Y TN
Sbjct: 33 DISWNAYYEQAGCVGAALISMGLEKGDCVSIIGDNCPEWVIIDMGVQCAGGTAVGVYATN 92
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISW 316
+ + L SD+ VE+++QL+K L+ + + P+LK ++ ++ + + V+++
Sbjct: 93 AWPQVAYVLGNSDSKFFFVENEEQLDKWLQFRDKAPRLKKVIVWDLEGLRHFEDEMVMTF 152
Query: 317 DELMELGRAAPD---ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
D+++E+GR D + + + + + L+YTSGT G K ML+H N+ + I
Sbjct: 153 DDILEMGRGVLDKDSQPFESRMARVVPEDVSMLIYTSGTTGPPKGAMLTHRNLMWMGQAI 212
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++ V+SFLPL H+ Q + +T T+ F +
Sbjct: 213 TTENPMDDED-EVLSFLPLCHVFEQLFSVMGHITHGYTVNFIE 254
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ Y L +++ K+K+ MG DR R++ SGAAPIS ++ +F S+ + + E +G +E G
Sbjct: 326 FFYNLAHFVVFRKLKERMGFDRMRIAYSGAAPISPDVLHFFQSIGVNLVEGYGQTEGTGV 385
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
VS K VG I GT+ KI D +GEI +K
Sbjct: 386 TCVSRVGKVKFGTVGPPITGTEIKIAD-----DGEILVK 419
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++++ ++I+KF LP GE+ PTMKVKR +V + + +I+ Y
Sbjct: 550 ETLARVEQIKKFTILPKKLYEEDGEVTPTMKVKRNYVNEAFGDLIEAMY 598
>gi|322419627|ref|YP_004198850.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
gi|320126014|gb|ADW13574.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
Length = 603
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA+ KLG++ V I+ N W +D+G + AGG +Y TN+P + L SD
Sbjct: 49 VARGLRKLGIKPGDKVAILSENRAGWIIADMGILCAGGVTVPVYPTNTPAQIQYTLNHSD 108
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPGVISWDELMELGRAAPD-- 328
A I + Q K+L++K P ++ +V +E G+P P + ++ +L E+ D
Sbjct: 109 ARIVFISGKWQYRKLLEIKDAIPMVQLVVSFERFLGEPALP-LTTFYQLSEIDDPITDRE 167
Query: 329 -ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVI 387
E + V++ I T++YTSGT G K VMLSH NI F+ I+ K+ +
Sbjct: 168 REEIGGVIDAIDPESLMTIIYTSGTTGTPKGVMLSHQNILFDVCATIRKAKVLEEGEVFL 227
Query: 388 SFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNALKVYKATQAAIDR 432
SFLPLSH+ ++ Y + A + FAD +N L+V + R
Sbjct: 228 SFLPLSHVLERSTGYYLPVARGAMIAFADSIEKIAENMLEVQPTVMVCVPR 278
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 419 ALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 478
L++Y+ A++ +++ + I+KF LP DF++ GEL PT+K+KR + +Y+
Sbjct: 537 VLELYRQRVEAVN----TELAHFETIKKFVLLPRDFTLEAGELTPTLKLKRRVISDRYKD 592
Query: 479 IIDKFY 484
+I++ Y
Sbjct: 593 MIERMY 598
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 95 YMAYLEKNVSEPYTYRL----VRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSL 150
Y Y++K V P+ L L+ K+++ G D + G AP+ E+ +F S+
Sbjct: 314 YARYIDKKV--PFLLALQHAVADRLVFKKLRRRFG-DNLKFCSCGGAPLDREINEFFWSI 370
Query: 151 DIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+PI E +G++E + + D + VG + T+ I G+GEI ++
Sbjct: 371 GVPILEGYGLTETSPVLCNNTFDKLRFGSVGTPLESTEFTIA-----GDGEILVR 420
>gi|254473993|ref|ZP_05087386.1| long-chain fatty acid coa ligase, putative [Pseudovibrio sp. JE062]
gi|211956882|gb|EEA92089.1| long-chain fatty acid coa ligase, putative [Pseudovibrio sp. JE062]
Length = 608
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY VR AKA L LG+ +VCI+ +N PEW D+ A+ G G+Y T +
Sbjct: 52 EYGEQVRNAAKALLALGVNPGDAVCILSYNRPEWTIMDVAAMMIGAVPTGIYWTAAAPEI 111
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
+ L S I + E QL+ I + L+ +++ +G+ + P +W M LG
Sbjct: 112 NYILRHSQGRILLAETKAQLKGIGEQSENMRHLRKVIRLDGRVENPDQYTWASFMSLGEN 171
Query: 326 AP--DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+P D LD+ L IA + +YTSGT G K V +SH I + + FK + A
Sbjct: 172 SPGLDAELDQRLNDIAAEDIALQIYTSGTTGLPKAVQISHRAIRAESDALNLAFK-PTPA 230
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
IS+LP++HIA Q I +++A
Sbjct: 231 DRYISYLPMAHIAEQCGTIIQACDTGYPVYYA 262
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 21/187 (11%)
Query: 21 HGRTRIHLGEAGVAAQPPIS--VPGLLGRTAAQYPDQVALCQKQENGEWKKVTYKLQTTG 78
+ ++ LGE +P ++ VP + + + Q+ K + + K + + LQT+
Sbjct: 261 YAKSVTSLGEHLPEVRPTVTFGVPRIFEKIHEKVEKQL---NKDKGFKGKLIQWSLQTS- 316
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
K W +L A L N+ + RLV L K+K +GLD+ R+ +SG AP
Sbjct: 317 -KDWYGQ-----TLNGKSAGLMLNLKKKVANRLV----LDKIKHKIGLDKMRMFVSGGAP 366
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 198
+S + F LDI I EV+G SE G T++ +L VG+ + G KI
Sbjct: 367 VSKRVLEAFTGLDIVIREVYGQSENCGGATINIIGSTRLGSVGKPMEGVTIKIA-----A 421
Query: 199 NGEICLK 205
+GEI K
Sbjct: 422 DGEILCK 428
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QA I++ N + S ++I+KFE LP FSI TGEL PT+K++R V+ + ++ Y
Sbjct: 548 QAGINKVNARH-SRVERIRKFEILPDGFSIQTGELTPTLKIRRAKVLNNHADALENIY 604
>gi|374329662|ref|YP_005079846.1| long-chain-fatty-acid-CoA ligase [Pseudovibrio sp. FO-BEG1]
gi|359342450|gb|AEV35824.1| long-chain-fatty-acid-CoA ligase [Pseudovibrio sp. FO-BEG1]
Length = 608
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY VR AKA L LG+ +VCI+ +N PEW D+ A+ G G+Y T +
Sbjct: 52 EYGEQVRNAAKALLALGVNPGDAVCILSYNRPEWTIMDVAAMMIGAVPTGIYWTAAAPEI 111
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
+ L S I + E QL+ I + L+ +++ +G+ + P +W M LG
Sbjct: 112 NYILRHSQGRILLAETKAQLKGIGEQSENMRHLRKVIRLDGRVENPDQYTWASFMSLGEN 171
Query: 326 AP--DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+P D LD+ L IA + +YTSGT G K V +SH I + + FK + A
Sbjct: 172 SPGLDAELDQRLNDIAAEDIALQIYTSGTTGLPKAVQISHRAIRAESDALNLAFK-PTPA 230
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
IS+LP++HIA Q I +++A
Sbjct: 231 DRYISYLPMAHIAEQCGTIIQACDTGYPVYYA 262
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 21/187 (11%)
Query: 21 HGRTRIHLGEAGVAAQPPIS--VPGLLGRTAAQYPDQVALCQKQENGEWKKVTYKLQTTG 78
+ ++ LGE +P ++ VP + + + Q+ K++ + K + + LQT+
Sbjct: 261 YAKSVTSLGEHLPEVRPTVTFGVPRIFEKIHEKVEKQL---NKEKGFKGKLIQWSLQTS- 316
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
K W +L A L N+ + RLV L K+K +GLD+ R+ +SG AP
Sbjct: 317 -KDWYGQ-----TLNGKSAGLMLNLKKKVANRLV----LDKIKHKIGLDKMRMFVSGGAP 366
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 198
+S + F LDI I EV+G SE G T++ +L VG+ + G KI
Sbjct: 367 VSKRVLEAFTGLDIVIREVYGQSENCGGATINIIGSTRLGSVGKPMEGVTIKIA-----A 421
Query: 199 NGEICLK 205
+GEI K
Sbjct: 422 DGEILCK 428
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QA I++ N + S ++I+KFE LP FSI TGEL PT+K++R V+ + ++ Y
Sbjct: 548 QAGINKVNARH-SRVERIRKFEILPDGFSIQTGELTPTLKIRRAKVLNNHADALENIY 604
>gi|148706262|gb|EDL38209.1| mCG127436, isoform CRA_b [Mus musculus]
Length = 151
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
+GLER+H V I+G N+ EW + +GAI AGG + G+ ++ SP+AC TS+ +I VV+
Sbjct: 23 VGLERFHGVGIMGINSSEWVIASIGAIMAGGISVGILSSISPKACQVIAETSEMDIFVVD 82
Query: 281 DDKQLEKILKVKAQCPKLKAIVQY--EGKPDKPGVISWDELMELGRAAPDESLDRVLETI 338
+D+QL+KI +++ LKAI+QY + + +P + SW ++L DE LD++++T+
Sbjct: 83 NDRQLQKINQIQGYLKHLKAIIQYREDIQEAQPNLYSWKGFLDLADGISDEKLDKIIDTL 142
Query: 339 ATNECCTLV 347
N+CC LV
Sbjct: 143 KPNQCCALV 151
>gi|333921612|ref|YP_004495193.1| AMP-binding protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333483833|gb|AEF42393.1| AMP-binding enzyme [Amycolicicoccus subflavus DQS3-9A1]
Length = 638
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I Y +V+ VA LG+ V I+ N PEW + DLGA+ G G Y+TN
Sbjct: 36 DITWATYHEHVQLVAHGLADLGVGATDRVGILSENRPEWLFGDLGALTLRGVTVGFYSTN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISW 316
P + L + + + ED +Q++K+++V +CP L+ ++ E G +P ++S+
Sbjct: 96 PPAEIEYQLNDAGVRVLIAEDQEQVDKVMEVWDRCPALERVIYLEPRGVGNYSEPRLLSF 155
Query: 317 DELMELGRAAPDESLDRVLETIAT----NECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+L++ G AA E+ LE IA ++ TL+YTSGT G K MLS NI + +
Sbjct: 156 SDLLDRG-AAHRETHPGFLEAIAAQAQPDDIATLIYTSGTTGPPKGAMLSIANIDYAISA 214
Query: 373 IIQYFKLESAALS----VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+++ L S +SFLPL H+A + I++ + FA+
Sbjct: 215 LLRDTGLVDPPPSPDDVSLSFLPLCHVAERMFTIWNNAANGLVVHFAE 262
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 68 KKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLD 127
K+ TY+ TG+ + IA S +H VS Y L L+ ++ +GL
Sbjct: 304 KRFTYR-AGTGLGQRIAEARISNGGEH------TPVSRAL-YALGYPLVFRALRDKLGLR 355
Query: 128 RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGT 187
+ R ++SGAAPIS ++ R+F +L +P+ E +GM+E T S KL VG IPG
Sbjct: 356 KVRAAISGAAPISPDVLRFFSALGVPMFEAYGMTENCAVATASRRGRVKLGTVGEPIPGI 415
Query: 188 QTKIVDPDEEGNGEICLKE 206
+ ++ +E GEI +
Sbjct: 416 ELQL----DEKTGEILTRH 430
>gi|429753318|ref|ZP_19286127.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429173984|gb|EKY15489.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 636
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
++KA L LG++ +V I+ N P+W +DL + +YTTN+ E L+ + ++
Sbjct: 86 LSKALLSLGVQPQETVGILSQNTPQWSLADLACLQIRAITVPIYTTNTAEQALYVMNHAE 145
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAP-DE 329
+ V D+KQ +K+L+V QCP L+ IV + + +K I W++ + LG ++ D
Sbjct: 146 VKVLFVGDEKQYQKVLQVANQCPSLQMIVVCDNEVALTEKQYSIHWNDFLALGSSSQYDV 205
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISF 389
++ L+ ++ T++YTSGT G K VMLS++N+ F + S ++F
Sbjct: 206 EFEKRLKERNLDDLFTIIYTSGTTGEPKGVMLSYENLAFQMIGHTERLSTVDNTDSSLAF 265
Query: 390 LPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
LPLSH+ + + + + D N ++
Sbjct: 266 LPLSHVFERAWTFFCLYKAVTVYYLDDTNLVR 297
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L L+ K+K+A+G R + G A + + R+F S+ I + +GM+E +
Sbjct: 365 YNLFDKLVYKKLKEALG-GRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETVATIS 423
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
+ VG +P Q +I + +E G + +K Y N AK F G R
Sbjct: 424 CWGDNRINPQSVGEVMPNVQVRIGEDNEILVKGGMVMKGYYKNPEETAKVFTPDGYLR 481
>gi|170050092|ref|XP_001859226.1| AMP dependent ligase [Culex quinquefasciatus]
gi|167871666|gb|EDS35049.1| AMP dependent ligase [Culex quinquefasciatus]
Length = 176
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 69/91 (75%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSKVK A+GL RC ++ AAP+ E K+YF+SLD+PI E FGMSE +GAH+++APD
Sbjct: 25 LLLSKVKDALGLSRCLTMVTAAAPMDPETKKYFMSLDLPIMEAFGMSETSGAHSLTAPDS 84
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ +G+++ G +TKI PDE G+GEIC++
Sbjct: 85 YNFATIGKSLGGCETKIDKPDERGHGEICMR 115
>gi|403334780|gb|EJY66561.1| Long-chain acyl-CoA synthetases (AMP-forming) [Oxytricha trifallax]
Length = 674
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 119/226 (52%), Gaps = 10/226 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+EY + AKA LG+ SV I+G NAPEW + +G +G+Y TN+ +A
Sbjct: 84 REYFRDSVLFAKALEVLGVNERKSVNIMGHNAPEWVIAFMGGSLFNCVTSGVYPTNAADA 143
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY------EGKPDKPGVISWDE 318
CL+ S+A + VV+ +QL+K + P +KAIV Y DK + W++
Sbjct: 144 CLYQAEHSEAEVIVVDSIEQLKKYEVNAHKLPNIKAIVVYTLDKLPNDVKDKRYFV-WND 202
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI--TFNAACIIQY 376
+ LG+ +E + ++ +C TL+YTSGT G K M+SHDN+ T ++A +
Sbjct: 203 FLNLGKDVKEEIIKDKIKKQKPGQCATLIYTSGTTGNPKACMISHDNLIWTIHSAFVTLA 262
Query: 377 FKLE-SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ + ++S+LPLSHIA D+ S + L+FA +AL+
Sbjct: 263 GQTPFTEDERIVSYLPLSHIAGLVNDVISHVYTGHKLYFARPDALQ 308
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 106 PYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
P Y +LIL ++K A+GLD+C+ L GAAPI YF SLDIPI +GMSE
Sbjct: 373 PLCYSFANFLILKRIKGALGLDQCKAYLYGAAPIKQSTLEYFASLDIPILGAYGMSETTA 432
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLER 225
A T+ P +F L VG + G + KI +PDE+G GEIC + ++ +G +
Sbjct: 433 ATTMQNPQNFNLKSVGYIMNGGELKIDNPDEKGIGEICFR----------GRYVMMGYLK 482
Query: 226 YHSVCIIGFNAPEWFYS-DLGAIYAGGF-------------AAG------MYTTNSPEAC 265
S F++ + +S DLG I GF A G + + +AC
Sbjct: 483 NESATQEIFDSQGFLHSGDLGKIDEKGFTFITGRIKELIITAGGENIAPVIIEDHFKDAC 542
Query: 266 LHCLVTSDANICVV-EDDKQLEKILKVKAQCPKLKAIV 302
C +NI VV E K L I+ +KA K IV
Sbjct: 543 PPC-----SNIMVVGEQQKFLGAIITLKADIDPAKGIV 575
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ K Q I++ N K++S A +I+K++ +P DFS+ GE PT+K+KR KKYQ+I+
Sbjct: 606 KIQKYIQQCIEKTNSKAVSRAAQIRKWKIIPEDFSLAGGEFTPTLKLKRKVTEKKYQNIV 665
Query: 481 DKFY 484
D+FY
Sbjct: 666 DEFY 669
>gi|311742143|ref|ZP_07715953.1| AMP-binding enzyme [Aeromicrobium marinum DSM 15272]
gi|311314636|gb|EFQ84543.1| AMP-binding enzyme [Aeromicrobium marinum DSM 15272]
Length = 614
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ +Y VA L LG+E + + N EW Y D+G G+Y TN
Sbjct: 31 EVTWAQYWERSTLVAHGLLALGVEPGDRIAVHSENRREWLYCDIGITSVRAATVGLYPTN 90
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVIS 315
LH L S + + ED +QL+K L V + P L+ IV E G ++S
Sbjct: 91 PSPEVLHVLRDSGSRVLFAEDQEQLDKALDVIDELPHLERIVYLEPRGIQGHYTDGRLLS 150
Query: 316 WDELMELG---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
W+E + LG R+ SLD LE + ++ TLVYTSGT G K ML+ NITF
Sbjct: 151 WEEFVALGEQHRSQHPGSLDERLEAVEPSDLATLVYTSGTTGPPKGAMLTQANITF---- 206
Query: 373 IIQYFKLESAALS--------VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++ + +SA +S V+S+LPL H+A + + V + FA+
Sbjct: 207 VLDTLQGQSAFVSPPANEKDLVLSYLPLCHVAERVFTTWFNAAVGTQVNFAE 258
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 17/150 (11%)
Query: 67 WKKVTYKLQT-----TGVKRWIANYAKSTSLQHYMA--YLEKNVSEPYTYRL---VRWLI 116
W+K+ +Q + +KR ANYA + ++ +E+ R+ V W++
Sbjct: 282 WEKIAAGVQVRMAGASRIKR--ANYAVWMKVASWIGRTLVERQGKHTVGTRIAYAVGWVM 339
Query: 117 LSK-VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
L + +++ +GL + R + SGAAPIS E+ +F+ L +P+ EV+GM+E + T +
Sbjct: 340 LYRPLRERIGLAKTRYAASGAAPISPEVLEFFMGLGLPMFEVYGMTENSAIATANMAGRV 399
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ VG PG + +I DEE GEI +
Sbjct: 400 RVGTVGEPQPGAEVRI---DEE-TGEILTR 425
>gi|350586755|ref|XP_001925100.4| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like [Sus
scrofa]
Length = 670
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 283 KQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDELMELGRAAPDESLDRVLETIAT 340
K + LK+ P LKA+V Y P K V + +E MELG A P+E+LD +++
Sbjct: 160 KAAKGFLKIWKNLPHLKAVVTYREHPLKKMASVYTMEEFMELGNAVPEEALDTIIDAQQP 219
Query: 341 NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS---VISFLPLSHIAA 397
N+CC LVYTSGT G K VMLS DNIT+ A Q ++ A + V+S+LPLSHIAA
Sbjct: 220 NQCCVLVYTSGTTGNPKGVMLSQDNITWTARFGSQAGDIQPAEVQQEVVVSYLPLSHIAA 279
Query: 398 QTVDIYSVMTVAATLWFADKNALK 421
Q D+++ + A + FA+ +ALK
Sbjct: 280 QIYDLWTGIQWGAQVCFAEPDALK 303
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 112/192 (58%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 325 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPSSDL-KPFTTRLADYLVLAKVR 383
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P++++L G
Sbjct: 384 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPNNYRLYSSG 443
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ G W +
Sbjct: 444 KVVPGCRVKLVNEDAEGTGEICLWG-----RTIFMGYLNMEDKTREAIDKDG-----WLH 493
Query: 242 S-DLGAIYAGGF 252
+ D+G + A GF
Sbjct: 494 TGDVGRLDADGF 505
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++KY+ IID
Sbjct: 603 VYQAIEEGIQRVNMHAAARPYHIQKWAILERDFSISGGELGPTMKLKRLSVLEKYKDIID 662
Query: 482 KFY 484
FY
Sbjct: 663 CFY 665
>gi|375101559|ref|ZP_09747822.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
cyanea NA-134]
gi|374662291|gb|EHR62169.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
cyanea NA-134]
Length = 598
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 103/203 (50%), Gaps = 6/203 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E+ A V +VAK +K G+ + V ++ EW D AGG +Y T+
Sbjct: 45 DVTAREFAAQVLSVAKGLVKAGVGQGDRVALMSKTRYEWTLVDFAIWAAGGVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A + VVE E I V+++ P+L + Q EG DKP V D L
Sbjct: 105 SAEQAHWILTDSGAKVVVVETAAHAETIESVRSRLPELDHVFQIEG--DKPAV---DRLT 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
ELG D+ + + ++ T+VYTSGT G K V+L+H N+ I+ F KL
Sbjct: 160 ELGGELADDEVHGRRRAVKASDTATIVYTSGTTGRPKGVVLTHRNLLAEVRADIKAFPKL 219
Query: 380 ESAALSVISFLPLSHIAAQTVDI 402
A S++ FLPL+HI A+ + I
Sbjct: 220 MEAGNSLLLFLPLAHILARAIAI 242
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ +K++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+ D
Sbjct: 332 LVYTKLRAALG-GRCIAAVSGGAPLGGRLAHFFRGIGVPVFEGYGLTETSAAAHVNTEDA 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEG--NGEICLKEYEAN 210
FK+ VGR + GT +I PD E G++ EY N
Sbjct: 391 FKVGTVGRPVAGTSVRIA-PDGEVLLKGDVVFGEYWNN 427
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
D AL+ + Q A+D AN K +S A+ I+KF LP DF+ GE+ P++K+KR V K
Sbjct: 531 DDAALRA--SVQTAVDEAN-KQVSQAESIKKFVILPNDFTEAGGEVTPSLKLKRNVVSKN 587
Query: 476 YQSIIDKFY 484
Y I++ Y
Sbjct: 588 YAQAIEQLY 596
>gi|149920646|ref|ZP_01909112.1| AMP-dependent synthetase and ligase [Plesiocystis pacifica SIR-1]
gi|149818556|gb|EDM78004.1| AMP-dependent synthetase and ligase [Plesiocystis pacifica SIR-1]
Length = 601
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 106/205 (51%), Gaps = 3/205 (1%)
Query: 200 GEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTT 259
G + + A+ R V KA + G+E V +I W +D+G + AGG +Y +
Sbjct: 32 GPVTWNQLWADARKVGKALIAAGIESGDRVNVIAHTCYRWISTDMGILAAGGVTVPIYPS 91
Query: 260 NSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDKPGVISWD 317
N P+ C + S A + ++ Q+ K ++ + + +VQ+EG+ D VI+WD
Sbjct: 92 NLPDECQYVTDHSGARLVFAQNADQVAKFIEQRDNLAGVVKVVQWEGEVASDDGWVITWD 151
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ G + DE LD +++ + T++YTSGT G K V+L+H N+ + A +
Sbjct: 152 AFLAAGESVSDEQLDARSASLSPDSILTIIYTSGTTGRPKGVVLTHSNMLYEAKATAEIG 211
Query: 378 KLESAALSVISFLPLSHIAAQTVDI 402
L + + ++ FLP++H+ A+ ++I
Sbjct: 212 LLRTDDIQLL-FLPMAHVFAKVLEI 235
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 109 YRLVRWLILSKVK---QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
+ L++ + SKV QA+ R R +SG AP+S ++ +F I + E +GM+E +
Sbjct: 322 FGLLKKTVFSKVGEGIQAILGGRMRAMVSGGAPLSKKIAWFFRDAGIVLVEGYGMTESSA 381
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE---EGNGEICLKEY----EANVRTVAKAF 218
A T+ P + ++ VG +PGT+ KI + E +G G ++EY EA T+ +
Sbjct: 382 ATTIGRPTNNRIGTVGEAMPGTKIKIAEDGEVLIQGPG--VMREYWRNEEATKETIIDGW 439
Query: 219 LKLG 222
L G
Sbjct: 440 LHTG 443
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 427 QAAIDRANLKS---ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKF 483
+A I+R +S +++ + I+KF+ L AD SI TGEL + VKR V K+ I D F
Sbjct: 535 RAEIERVVAESNAELASYETIKKFKILDADLSIETGELTAKLSVKRKVVSSKFGHIFDGF 594
Query: 484 Y 484
Y
Sbjct: 595 Y 595
>gi|444511960|gb|ELV10010.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Tupaia chinensis]
Length = 462
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 5/129 (3%)
Query: 298 LKAIVQYEG--KPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGA 355
LKAIVQY+ K + SW++ MELG + PD L+R++E+ N+C L+YTSGT G
Sbjct: 58 LKAIVQYKPPIKETNNNIYSWEDFMELGDSIPDSQLERIIESQKANQCAVLIYTSGTMGD 117
Query: 356 SKPVMLSHDNITFNAACIIQ---YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
K VMLSHDNIT+ A + ++ +V+S+LPLSHIAAQ +DI+ + +
Sbjct: 118 PKGVMLSHDNITWMAGAAAKDAGMINMQGRRETVVSYLPLSHIAAQMMDIWIPIKIGGLT 177
Query: 413 WFADKNALK 421
+FA +ALK
Sbjct: 178 YFAQPDALK 186
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 64/90 (71%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SKVK+ +GLD C +SGAAP++ + ++FLSLDIPI +++GMSE +G HT+S +
Sbjct: 188 LVFSKVKKVLGLDHCHYFISGAAPLAEDTTQFFLSLDIPIGQMYGMSESSGPHTISNANM 247
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
+++ G+ + G + ++ D++G GE+CL
Sbjct: 248 YRILSCGKVLNGCKILLIHQDKDGIGEVCL 277
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELG 462
VY A Q ID N ++ SNAQKI+K+ L DFSI GELG
Sbjct: 414 VYAAIQQGIDAVNQEATSNAQKIRKWAILEKDFSIQGGELG 454
>gi|384566638|ref|ZP_10013742.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
glauca K62]
gi|384522492|gb|EIE99687.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
glauca K62]
Length = 598
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E+ A V +VAK +K G+++ V ++ EW D AGG +Y T+
Sbjct: 45 DVTAREFAAQVLSVAKGLVKAGVKQGDRVALMSKTRYEWTLIDFAIWAAGGITVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A + VVE E I V+ + L+ + Q EG DKP V ++L
Sbjct: 105 SAEQAHWILTDSGAKVAVVETAAHAETIESVRGRLSDLEHVYQIEG--DKPAV---EQLT 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
ELG+ D+ + + N+ T+VYTSGT G K V+L+H N+ I+ F KL
Sbjct: 160 ELGKDLADDEIHGRRRAVKANDTATIVYTSGTTGRPKGVVLTHRNLLAEVRADIKAFPKL 219
Query: 380 ESAALSVISFLPLSHIAAQTV 400
A S++ FLPL+HI A+ +
Sbjct: 220 MEAGNSLLLFLPLAHILARAI 240
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ +K++ A+G RC ++SG AP+ L +F L +P+ E +G++E + A V+ +
Sbjct: 332 LVYTKLRAALG-GRCIAAVSGGAPLGGRLAHFFRGLGVPVFEGYGLTETSAAAHVNTEEA 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
FK+ VGR + GT +I +GE+ LK
Sbjct: 391 FKVGTVGRPVAGTSVRIAS-----DGEVLLK 416
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ Q A+D AN K +S+A+ I+KF LP DF+ GE+ P+MK+KR V K Y + I++ Y
Sbjct: 538 SVQEAVDEAN-KQVSHAEAIKKFVILPNDFTEAGGEVTPSMKLKRNVVSKNYANAIEQLY 596
>gi|397689178|ref|YP_006526432.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
gi|395810670|gb|AFN73419.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
Length = 607
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 14/224 (6%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
+G+++ V II N PEW Y+D+ + G +Y ++ ++ L S+A V
Sbjct: 60 MGVKKDDKVAIISENRPEWVYADMAILGLGAIDVPLYPISTSDSIEFILNNSEAVGIFVS 119
Query: 281 DDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDELMELGRAAPDES---LDRV 334
+ L KILK+K +C LK ++ E PDK GV S+++++ +G+ E+
Sbjct: 120 NKFHLNKILKIKDKCKHLKFVIVMNNAEKSPDK-GVYSFEDILNMGKEFRKENPGYFKDK 178
Query: 335 LETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
E + N+ CT++YTSGT G K VML+H NI N + F ++ + +SFLPL H
Sbjct: 179 SELVEENQLCTIIYTSGTTGEPKGVMLTHKNIVSNIKAAHEIFDIDETD-TFLSFLPLCH 237
Query: 395 IAAQTVDIYSVMTVAATLWFAD------KNALKVYKATQAAIDR 432
I + Y+ + T+ +A+ N L++ A+ R
Sbjct: 238 IFERMAGYYTAFSCGGTIAYAESIEKIASNMLEIRPTIMTAVPR 281
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKN---VSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
K+ I N+A T ++ +A VS ++L L+LSK+++ G R R +SG
Sbjct: 301 KQKIFNWAIETGKEYQLARKSGQPIPVSLTLKHKLADKLVLSKLRERTG-GRMRFFISGG 359
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
A ++ EL +F + I I E +G++E + + +D+K VG+ +PG + KI E
Sbjct: 360 AALARELGIFFEAAGILIIEGYGLTESSPVIAANRLNDYKFGTVGKPMPGVEVKIAKDGE 419
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +S+ +K++KF L F+I GEL P++KVKR + ++Y+ +ID+ Y
Sbjct: 554 KKLSSFEKVRKFTLLDKPFTIEDGELTPSLKVKRKVIEERYRDLIDEMY 602
>gi|346992642|ref|ZP_08860714.1| AMP-binding enzyme [Ruegeria sp. TW15]
Length = 628
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 121/241 (50%), Gaps = 16/241 (6%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y + R + A KLGL+R V I+ + EW + D+G GG A+G+YTT+S
Sbjct: 66 DYWQHARWIGLALRKLGLQRGEVVSILSEDRKEWAWFDMGIQCVGGIASGVYTTDSAAQL 125
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELME 321
+ + S + +VED++QL+K L+V+ Q P L ++ E + D P + +L
Sbjct: 126 KYLINDSGSRFLIVEDEEQLDKFLEVEEQLPDLLKVIILEDEGLHDLDHPRCMMIGDLYS 185
Query: 322 LGRAAPDE---SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LGR A E + + + + + L+YTSGT G K MLSH+NI AA
Sbjct: 186 LGRQAEAEEPGAFEAEIAAASPQDTALLIYTSGTTGNPKGAMLSHENIM--AAIEAGAHS 243
Query: 379 LESAALS-VISFLPLSHIAAQTVDIYSVMTVAATLWFADK------NALKVYKATQAAID 431
L S + + FLPL HI + V IY + + +T+ FA+ N +V AT A+
Sbjct: 244 LPSQSTDEQLCFLPLCHILERDVSIYYPLAMKSTVNFAESPETVFANLQEVSPATFTAVP 303
Query: 432 R 432
R
Sbjct: 304 R 304
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 101 KNVSEPYTYRLVRW--LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVF 158
K V P R W L+L +++ +GLDR R SGAAPIS +L R++ ++ +PI E F
Sbjct: 346 KPVPSPVAMRFWFWDRLVLRNLRRMLGLDRLRRGGSGAAPISPDLLRWYWAIGVPIVEGF 405
Query: 159 GMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKA 217
GM+E AG ++ K+ +G +PG +I D E + G + Y N A++
Sbjct: 406 GMTETAGIAALNTLGVNKIGTIGMPVPGNDMRISDEGEIQVKGLNIFQGYWRNNAKTAES 465
Query: 218 F 218
F
Sbjct: 466 F 466
>gi|385809651|ref|YP_005846047.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
gi|383801699|gb|AFH48779.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
Length = 611
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Query: 197 EGNG-EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
EGN + +++ A LG++R V II N PEW YSD+ + G
Sbjct: 36 EGNFVGVSYDQFKEETDNFAFGLANLGVKRDDKVAIISENRPEWVYSDMAILSLGAVDVP 95
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPG 312
+Y + + E+ + S++ +V + QL K LK++ C ++ I+ Y K P+ PG
Sbjct: 96 LYPSLTAESVEFIINNSESKGIIVSNKFQLNKFLKIRNNCKTIEFIIIYNEKDFDPNIPG 155
Query: 313 VISWDELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
+ ++ ++ ++G+ E L +E + CT++YTSGT G K V+L+H+NI N
Sbjct: 156 LYTFKQVQDIGKRYSKEHPNLLKDSIEMTKPEDVCTIIYTSGTTGEPKGVVLTHNNILSN 215
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++ F + + +SFLPL HI + Y+ T+ +A+
Sbjct: 216 VRAALECFPINKDDI-FLSFLPLCHIFERMAGYYTAFASGGTICYAE 261
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYT--YRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
K+ I ++A T ++ A + VS P +++ L+ K+++ G R R +SG A
Sbjct: 303 KQKIFHWAIETGKEYASAKKKGKVSIPLAAKHKVADKLVFKKLRERTG-GRLRFFISGGA 361
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEE 197
+S +L +F ++ I I E +G++E + + DD+K VG+ PG + KI PD
Sbjct: 362 ALSKDLGEFFEAVGILIIEGYGLTESSPVIAANRVDDYKFGTVGKPFPGVEVKIA-PD-- 418
Query: 198 GNGEICLK 205
GEI K
Sbjct: 419 --GEILAK 424
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
++YK ++ +++ + ++N ++++KF L FSI TGE+ P++KV+R ++ ++Y+++I
Sbjct: 541 RIYKLLESELNQMQ-RQLANYERVRKFALLDKPFSIETGEITPSLKVRRKYIEERYRNLI 599
Query: 481 DKFYD 485
+K Y+
Sbjct: 600 EKMYE 604
>gi|381162311|ref|ZP_09871541.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea NA-128]
gi|379254216|gb|EHY88142.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea NA-128]
Length = 598
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 6/208 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E+ A V +VAK +K G+ + V I+ EW D AG +Y T+
Sbjct: 45 DVTAREFAAQVLSVAKGLMKAGIAQGDRVAIMSKTRYEWTLVDFAIWAAGAVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE + I V+++ P+L + Q EG DKP V D L
Sbjct: 105 SAEQAHWILTDSGAKAVVVETAAHSDTIESVRSRLPELDHVFQIEG--DKPAV---DRLT 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
ELG D+ + + + ++ T+VYTSGT G K V+L+H N+ I+ F KL
Sbjct: 160 ELGADVADDEVHTRRKAVQADDMATIVYTSGTTGRPKGVVLTHRNLLAEVRADIKAFPKL 219
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMT 407
A S++ FLPL+HI A+ + I ++ +
Sbjct: 220 MGAGNSLLLFLPLAHILARAIAITAITS 247
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 36/148 (24%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+ D
Sbjct: 332 LVYSKLQAALG-GRCVAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTETSAAANVNTEDA 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF 234
FK+ VG+ + GT +I + +GE+ LK + RY +
Sbjct: 391 FKVGTVGKPVAGTSVRIAE-----DGEVLLKG-------------DVVFTRY-------W 425
Query: 235 NAPE---------WFYS-DLGAIYAGGF 252
N PE WF++ D+G + A GF
Sbjct: 426 NNPEATRESLEDGWFHTGDIGELDADGF 453
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A QA +D+AN +S A+ I+KF LP DF+ GE+ P+MK+KR V K Y I++ Y
Sbjct: 538 AVQAVVDKAN-TLVSQAESIKKFVILPNDFTEAGGEVTPSMKLKRNVVSKNYADAIERLY 596
>gi|213963544|ref|ZP_03391797.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
gi|213953824|gb|EEB65153.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
Length = 599
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 109/212 (51%), Gaps = 4/212 (1%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
++KA L LG++ +V I+ N P+W +DL + +YTTN+ E L+ + ++
Sbjct: 49 LSKALLSLGVQPQETVGILSQNTPQWSLADLACLQIRAITVPIYTTNTAEQALYVMNHAE 108
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAP-DE 329
+ V D+KQ +K+L+V QCP L+ I+ + + +K I W++ + LG ++ D
Sbjct: 109 VKVLFVGDEKQYQKVLQVANQCPSLQMIIVCDNEVALTEKQYSIHWNDFLALGSSSQYDV 168
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISF 389
++ L+ ++ T++YTSGT G K VMLS++N+ F + ++F
Sbjct: 169 EFEKRLKERNLDDLFTIIYTSGTTGEPKGVMLSYENLAFQMIGHTERLSTVDNTDISLAF 228
Query: 390 LPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
LPLSH+ + + + + D N ++
Sbjct: 229 LPLSHVFERAWTFFCLYKAVTVYYLDDTNLVR 260
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L L+ K+K+A+G R + G A + + R+F S+ I + +GM+E T
Sbjct: 328 YNLFDKLVYKKLKEALG-GRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETVA--T 384
Query: 169 VSAPDDFKLD--GVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
+S D +++ VG +P Q +I + +E G + +K Y N AK F G R
Sbjct: 385 ISCWGDNRINPQSVGEVMPNVQVRIGEDNEILVKGGMVMKGYYKNPEETAKVFTPDGYLR 444
>gi|418462127|ref|ZP_13033184.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea SZMC 14600]
gi|359737763|gb|EHK86686.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea SZMC 14600]
Length = 598
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 6/208 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E+ A V +VAK +K G+ + V I+ EW D AG +Y T+
Sbjct: 45 DVTAREFAAQVLSVAKGLMKAGIGQGDRVAIMSKTRYEWTLVDFAIWAAGAVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE + I V+++ P+L + Q EG DKP V D L
Sbjct: 105 SAEQAHWILTDSGAKAVVVETAAHSDTIESVRSRLPELDHVFQIEG--DKPAV---DRLT 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
ELG D+ + + + ++ T+VYTSGT G K V+L+H N+ I+ F KL
Sbjct: 160 ELGADVADDEVHTRRKAVQADDMATIVYTSGTTGRPKGVVLTHRNLLAEVRADIKAFPKL 219
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMT 407
A S++ FLPL+HI A+ + I ++ +
Sbjct: 220 MGAGNSLLLFLPLAHILARAIAITAITS 247
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 36/148 (24%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+ D
Sbjct: 332 LVYSKLQAALG-GRCVAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTETSAAANVNTQDA 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF 234
FK+ VGR + GT +I + +GE+ LK + RY +
Sbjct: 391 FKVGTVGRPVAGTSVRIAE-----DGEVLLKG-------------DVVFTRY-------W 425
Query: 235 NAPE---------WFYS-DLGAIYAGGF 252
N PE WF++ D+G + A GF
Sbjct: 426 NNPEATRESLEDGWFHTGDIGELDADGF 453
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A QA +D+AN +S A+ I+KF LP DF+ GE+ P+MK+KR V K Y I++ Y
Sbjct: 538 AVQAVVDKAN-TLVSQAESIKKFVILPNDFTEAGGEVTPSMKLKRNVVSKNYADAIERLY 596
>gi|260219960|emb|CBA27020.1| hypothetical protein Csp_A00190 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 633
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 107/216 (49%), Gaps = 12/216 (5%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A + LG E+ H+ I+ EW ++DL + AGG + G+Y T++P +
Sbjct: 75 VREIAGGLISLGFEQGHTASILANTVVEWVWADLAVLSAGGVSNGIYPTDAPSQVQYLCE 134
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIV--QYEG--KPDKPGVISWDELMELGR-- 324
S VEDD+QL+K L+V+AQC KL+ I+ EG D P V+S D L LGR
Sbjct: 135 DSGTRFLFVEDDEQLDKALEVRAQCSKLQKIIVMDMEGLRGLDDPDVLSLDALRALGRTY 194
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL--ES 381
AA ++ + + LVYTSGT G K M H I ++ + Y L +
Sbjct: 195 NAANPNAVPQRSANCKPEDLAILVYTSGTTGKPKGAMHLHQGIVYS---VRGYNTLIAQD 251
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
A+ + FLPL HIA + Y + A L F +
Sbjct: 252 ASDERMCFLPLCHIAERLGGEYFSLYTGAKLNFVEN 287
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L + L L+ V++ +G+ R R ++GAAPIS +L R++L+L +P+ EV+GM+E GA T
Sbjct: 360 FKLAQVLALNNVRKLIGIHRSRFLITGAAPISPDLVRWYLALGLPMLEVWGMTETCGAST 419
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ K +G + K+ DP GEI ++
Sbjct: 420 GVPVNKIKPGSIGPAASFNEVKL-DP---ATGEIMVR 452
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 419 ALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 478
A +V QA +DR N K + ++I+KF L + EL PTMK+KR V KKY++
Sbjct: 568 APEVQALIQAELDRVN-KKFARVEQIKKFFLLENQLTAEDEELTPTMKLKRKLVEKKYEA 626
Query: 479 IIDKFY 484
I+ Y
Sbjct: 627 RIEAMY 632
>gi|16553108|dbj|BAB71476.1| unnamed protein product [Homo sapiens]
Length = 466
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 71/102 (69%)
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
MELGR+ PD L++V+E+ N+C L+YTSGT G K VMLSHDNIT+ A + + FKL
Sbjct: 1 MELGRSIPDTQLEQVIESQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKL 60
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 61 TDKHETVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 102
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++ G+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 137 KSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 196
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 197 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 256
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + GF
Sbjct: 257 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDGLGF 305
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N ++++NAQ+I+K+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 403 VYKAIQQGINAVNQEAMNNAQRIEKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKQID 462
Query: 482 KFY 484
Y
Sbjct: 463 HMY 465
>gi|297622819|ref|YP_003704253.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
gi|297163999|gb|ADI13710.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
Length = 596
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 11/201 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
I Y +V +A+ + LG+E V I+ N PEW +DL AGG + G+YTTN
Sbjct: 42 RIPWSAYARSVWALARQLIALGVEPGDRVAILSENRPEWLVADLAIQSAGGISVGIYTTN 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV--QYEGKPDKPGVISWDE 318
S + L S A ++E+ +QLEK +V+A P L+ + + EG D ++WD
Sbjct: 102 SAAGVRYVLAHSGAVGVILENAEQLEKWREVRASLPALRFAIALEPEGATD---ALAWDA 158
Query: 319 LMELGRAA----PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
LM A P+ RV + ++ L+YTSGT G K V LSH N+ +++A +
Sbjct: 159 LMREAEALYARDPEPVAARV-RALTPHDTALLMYTSGTTGNPKGVQLSHGNLLWSSASLT 217
Query: 375 QYFKLESAALSVISFLPLSHI 395
Q +A +S+LPLSHI
Sbjct: 218 QALGY-TARDEALSYLPLSHI 237
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
++ WL L +GLDR RV++SGAAPIS + YF +L + + E +GM+E +G T+
Sbjct: 326 VIHWLRLR-----LGLDRVRVAISGAAPISPSILLYFRALGLDLREGYGMTENSGLATIH 380
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDE-----EGNGEICLKEYEANVRTVAKAFLKLG 222
+F++ VG PG + ++ + E G + + EA +A +L+ G
Sbjct: 381 Q-GEFRMGTVGTPFPGVEVRVAEDGEILTRSPGTFQGYWNDPEATAEAMAGDWLRTG 436
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 420 LKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
+K+ + AA++ K ++ + +++F LP GE+ TMKVKR + ++Y+ +
Sbjct: 528 VKLIEGEVAAVN----KGLARVETLKRFAILPKRLHFEDGEVTATMKVKRRAIAERYRDL 583
Query: 480 IDKFYD 485
I+ Y+
Sbjct: 584 IESLYE 589
>gi|319951690|ref|YP_004162957.1| long-chain-fatty-acid--CoA ligase [Cellulophaga algicola DSM 14237]
gi|319420350|gb|ADV47459.1| Long-chain-fatty-acid--CoA ligase [Cellulophaga algicola DSM 14237]
Length = 589
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 6/221 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
KEY T+++A L+LG++ + +I N EW D+G + G +Y T S +
Sbjct: 38 KEYLEKANTISRALLRLGVKPNEKIALISSENRTEWNIMDIGILQLGAQNVPIYPTISED 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S+A C V EKI K++ + P LK + + D +W E++ELG
Sbjct: 98 DYAYVLNHSEATYCFVSCADVYEKIKKIRHEVPNLKEVYSFNQLED---CKNWSEVLELG 154
Query: 324 RAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+ +++ +D + E + + + TL+YTSGT G K VMLSH+NI NA + +E
Sbjct: 155 KDTTNQNEVDALKEAVKSTDLATLIYTSGTTGKPKGVMLSHENIVSNALGSFKRIPIELG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVY 423
+SFLPL H+ + + IY +T+++A + + Y
Sbjct: 215 KSRALSFLPLCHVYERML-IYLYQYCGSTIYYAPIDQISEY 254
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + ++ L HY Y + L R LI SK K A+G V SG+
Sbjct: 285 TGIKKKLFFWSVDIGL-HYEPYGKNGWWYEQKLALARKLIFSKWKAALG-GELSVMASGS 342
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDP 194
A + L R F + + + E +G++E + +V+ + F++ VG+ I T+ KI
Sbjct: 343 AALQPRLARIFNAAEFGVMEGYGLTETSPVVSVNDMRNGGFRIGTVGKPIDRTEVKI--- 399
Query: 195 DEEGNGEICLK 205
E +GEIC+K
Sbjct: 400 --ESDGEICIK 408
>gi|328950818|ref|YP_004368153.1| long-chain-fatty-acid--CoA ligase [Marinithermus hydrothermalis DSM
14884]
gi|328451142|gb|AEB12043.1| Long-chain-fatty-acid--CoA ligase [Marinithermus hydrothermalis DSM
14884]
Length = 650
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 11/211 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ +EY VR A + LG + II N PEW Y++L GG + G+Y ++
Sbjct: 42 EVTFREYYETVRDFAHGLVALGFQEGEKFAIIADNIPEWLYAELAVQGLGGVSVGVYPSS 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE------GKPDKPGVI 314
P + L +DA + + ED +Q++K+ +++ Q PK++ ++ YE G D I
Sbjct: 102 VPPEIAYVLDYTDAAMVLAEDQEQVDKLREIRDQIPKVRKVI-YEDPRGMRGYRDDDWFI 160
Query: 315 SWDELMELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
S+ E++ELGRA + E +A ++ C TSGT G K ML H N+
Sbjct: 161 SFAEVLELGRAHRERHPGLFEERLAQGKPDDICHFSLTSGTTGKPKAAMLRHKNLIHMGV 220
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDI 402
+ + +E +SFLPL+ I Q + +
Sbjct: 221 ALQEVDPMEPTD-DYLSFLPLAWIGEQMMTV 250
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 43 GLLGRTAAQYPDQV--ALCQKQENGE---------WKKVTYKL-----QTTGVKRWIANY 86
GL G A +P+ V A+ +E G W+ + ++ ++ + RW+ Y
Sbjct: 253 GLTGGFAVNFPEDVETAMHDLKEIGPHVMFSPPRVWEGIQSQIWVKISESYRLNRWV--Y 310
Query: 87 AKSTSLQHYMA-YLEKNVSEPYTYRLV----RWLILSKVKQAMGLDRCRVSLSGAAPIST 141
+ + + A Y + P+ RL ++ +K +G R R + +G A +
Sbjct: 311 ERLLEIGYRAAEYRMRGKPMPFGLRLAYAFAHAVLFRPLKDQLGFLRLRRAYTGGAALGP 370
Query: 142 ELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
++ R++ ++ + + +++G +E G V D + D VG+ IPGT+ KI + E
Sbjct: 371 DVFRFYHAIGVNLKQIYGQTEITGIAYVHRDGDVRYDTVGKPIPGTEVKISESGE 425
>gi|313680106|ref|YP_004057845.1| amp-dependent synthetase and ligase [Oceanithermus profundus DSM
14977]
gi|313152821|gb|ADR36672.1| AMP-dependent synthetase and ligase [Oceanithermus profundus DSM
14977]
Length = 649
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 10/227 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ EY ANVR A L LG E +I N PEW Y++L GG + G+Y ++
Sbjct: 42 EVTYAEYYANVRDFAHGLLALGYEPGEKFAVIAENIPEWVYAELAVQGLGGVSVGIYPSS 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG-----VIS 315
P + + +D + +V+D +Q +K+L+VK + PKL+ IV YE G +S
Sbjct: 102 VPAEVAYVMDYADVTMALVQDQEQADKLLEVKDELPKLRRIV-YEDPRGMRGYDPDLFVS 160
Query: 316 WDELMELGRA---APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
++E+++LGR A + + LE ++ TSGT G K ML+H N+
Sbjct: 161 FEEVLDLGRKHRHAEPRAYEERLEAGRPDDVAHFSLTSGTTGKPKAAMLTHKNLIHMGVA 220
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNA 419
+ + +E +SFLPL+ I Q + + +T + F ++ A
Sbjct: 221 LQEIDPMEPTD-DYLSFLPLAWIGEQMMTMGMGLTGGFAVNFPEEVA 266
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y ++ +K +G R R + +G A + ++ R+F +L + + +++G +E G
Sbjct: 337 YAFAHAVLFRPLKDQLGFLRLRRAYTGGAALGPDVFRFFHALGVNLKQIYGQTEITGIAF 396
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
V D + D VG IPGT+ KI D E
Sbjct: 397 VHRDGDVRYDTVGVPIPGTEVKISDEGE 424
>gi|297697209|ref|XP_002825761.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1, partial [Pongo
abelii]
Length = 477
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 87/138 (63%), Gaps = 5/138 (3%)
Query: 289 LKVKAQCPKLKAIVQY-EGKPDK-PGVISWDELMELGRAAPDESLDRVLETIATNECCTL 346
+++ Q P LKA+V Y E P+K V + +E MELG P+E+LD +++T N+CC L
Sbjct: 1 MQIWKQLPHLKAVVIYKEPPPNKMANVYTMEEFMELGDEVPEEALDAIIDTQQPNQCCVL 60
Query: 347 VYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS---VISFLPLSHIAAQTVDIY 403
VYTSGT G K VMLS DNIT+ A Q + A + V+S+LPLSHIAAQ D++
Sbjct: 61 VYTSGTTGNPKGVMLSQDNITWTARYGSQAGDIRPAEVQQEVVVSYLPLSHIAAQIYDLW 120
Query: 404 SVMTVAATLWFADKNALK 421
+ + A + FA+ +ALK
Sbjct: 121 TGIQWGAQVCFAEPDALK 138
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 160 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 218
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E +R+FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 219 QALGFAKCQKNFYGAAPMTAETQRFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 278
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 279 KVVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 328
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 329 TGDAGRLDADGF 340
>gi|402875033|ref|XP_003901325.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like [Papio
anubis]
Length = 322
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 63/91 (69%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
I +Y R AK FLKLGLER HSV I+GFN+PEWF+S +G ++AGG G+YTT+
Sbjct: 140 HISYSQYYLLARRAAKGFLKLGLERAHSVAILGFNSPEWFFSAVGTVFAGGIVTGIYTTS 199
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKV 291
SPEAC + AN+ VV+ KQLEKILKV
Sbjct: 200 SPEACQYIAYDCCANVIVVDTQKQLEKILKV 230
>gi|254476154|ref|ZP_05089540.1| AMP-binding enzyme [Ruegeria sp. R11]
gi|214030397|gb|EEB71232.1| AMP-binding enzyme [Ruegeria sp. R11]
Length = 618
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 38/253 (15%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y + + + LGL+R V I+ + EW Y D+G AGG A+G+YTT+S +
Sbjct: 56 RDYWDHAEKIGLGLMSLGLQRGEVVSILSEDRKEWLYLDMGIQGAGGIASGVYTTDSAQQ 115
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS--------W 316
+ + S + +VE+D+QL+K L+++A P L+ ++ D+ G+
Sbjct: 116 LAYLINDSGSRFLIVENDEQLDKFLEIEADVPDLRHVIIL----DRDGLHDLQHEKCRFL 171
Query: 317 DELMELG---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
D+L + G R A ++ + + ++ L+YTSGT G K MLSH+NI
Sbjct: 172 DQLYDQGAAYRVANPDAFEIAVAQSRPDQTALLIYTSGTTGQPKGAMLSHENILAT---- 227
Query: 374 IQYFKLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNA 419
+ES A S+ + FLPL HI + V +Y M +T+ FA+ +N
Sbjct: 228 -----MESGARSLECLRSDEQLCFLPLCHILERNVSVYLPMAAGSTVNFAESPETVFENM 282
Query: 420 LKVYKATQAAIDR 432
+V AT A+ R
Sbjct: 283 QEVSPATFFAVPR 295
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 15/147 (10%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRW----LIL 117
W+KV ++ + T + RW + A + + YL P + L W L+L
Sbjct: 297 WEKVYSRVLVLAQEATALGRWAFSRAVAAG-EARAGYLLSGRPVPKSIALRYWIWDHLVL 355
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
+++ +GLDR R +GAAPIS +L R++ S+ +P+ E +GM+E AG +V+ D K
Sbjct: 356 RNLRRMLGLDRLRRGGTGAAPISPDLLRWYWSVGVPLIEGYGMTENAGLTSVNQVDAHKP 415
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICL 204
VG+ +PG +I D +GEI L
Sbjct: 416 GTVGQAVPGVTIRIAD-----DGEIQL 437
>gi|408492400|ref|YP_006868769.1| long-chain-fatty-acid--CoA ligase [Psychroflexus torquis ATCC
700755]
gi|408469675|gb|AFU70019.1| long-chain-fatty-acid--CoA ligase [Psychroflexus torquis ATCC
700755]
Length = 591
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 9/223 (4%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAA 254
NGE KEY A + +++ L+LG++ + +I N EW D+G + G
Sbjct: 29 NGEWKSTSSKEYVAQLNKISRGLLRLGVQPNDKIALISTNNRTEWNIMDIGIMQLGAQDV 88
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T E + L S++ C V D + +K++ +K Q LK + ++ D G
Sbjct: 89 PIYPTICQEDYAYVLNHSESKFCFVSDKEVYDKVMAIKGQVKSLKEVYTFD---DVDGAK 145
Query: 315 SWDELMELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+W E++ELG ++S + +++ + N+ TL+YTSGT G K VMLSH NI NA
Sbjct: 146 NWSEVLELGTDESNQSEVQSLMDKVTENDLATLIYTSGTTGRPKGVMLSHKNIASNALHS 205
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L+ +SFLP+ HI + + Y +++FA+
Sbjct: 206 STRLPLDLGTAKALSFLPVCHIYERMLQ-YMYQFSGVSVYFAE 247
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + +A LQ Y Y +L R LI K ++A+G +V SG+
Sbjct: 286 TGIKKNLFFWAVELGLQ-YQPYGANGWWYETRLKLARKLIFVKWQEALG-GNLKVIASGS 343
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDP 194
A + L R F + + + E +G++E + V+ + FK+ VG +P T+ KI
Sbjct: 344 AALQPRLARVFNAAGMSVMEGYGLTETSPVVAVNDMRNGGFKIGTVGLPLPETEVKIAK- 402
Query: 195 DEEGNGEICLK 205
+GEI +K
Sbjct: 403 ----DGEILVK 409
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q ID N K N +KI++FE P +SI L PTMK+KR + ++Y + +K Y
Sbjct: 533 QEEIDFYNQK-FGNWEKIKRFELTPDVWSIEKEHLTPTMKLKRRVIKERYMDLYNKIY 589
>gi|383831140|ref|ZP_09986229.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
xinjiangensis XJ-54]
gi|383463793|gb|EID55883.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
xinjiangensis XJ-54]
Length = 598
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 6/201 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E+ A V +VAK +K G+ + V ++ EW D AGG + +Y T+
Sbjct: 45 DVTAREFAAQVLSVAKGLVKAGIGQGDRVALMSKTRYEWTLIDFAIWAAGGVSVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A + VVE + + V+ + P+L + Q EG DKP V ++L
Sbjct: 105 SAEQAHWILTDSGAKVIVVETAEHTATVESVRGRLPELAHVFQIEG--DKPAV---EQLT 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
ELG D+ + T+A+++ T+VYTSGT G K V+L+H N+ + F +L
Sbjct: 160 ELGGEIADDEVHTRRRTVASSDNATIVYTSGTTGRPKGVVLTHRNLLAEVRADTKAFPRL 219
Query: 380 ESAALSVISFLPLSHIAAQTV 400
A S++ FLPL+HI A+ +
Sbjct: 220 MEAGNSLLLFLPLAHILARAI 240
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+ +
Sbjct: 332 LVYSKLRAALG-GRCIAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTETSAAANVNTVEA 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
FK+ VGR + GT +I + +GE+ LK
Sbjct: 391 FKVGTVGRPVAGTSVRIAE-----DGEVLLK 416
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A Q A+D AN + +S A+ I+KF LP DF+ GE+ P++K+KR V K Y + I++ Y
Sbjct: 538 AVQEAVDAANTQ-VSQAESIKKFVILPNDFTEAGGEVTPSLKLKRNVVSKNYANAIEQLY 596
>gi|260433657|ref|ZP_05787628.1| AMP-binding enzyme [Silicibacter lacuscaerulensis ITI-1157]
gi|260417485|gb|EEX10744.1| AMP-binding enzyme [Silicibacter lacuscaerulensis ITI-1157]
Length = 628
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 10/219 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y + + + A KLGL+R V I+ + EW + DLG GG A+G+YTT+S
Sbjct: 66 DYWQHAKWIGLALRKLGLQRGEVVSILSEDRKEWAWFDLGIQCVGGIASGVYTTDSASQL 125
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV--QYEGKPD--KPGVISWDELME 321
+ + SD+ +VED++QL+K L ++ + P L ++ + EG D P + ++L
Sbjct: 126 KYLVNDSDSRFLIVEDEEQLDKFLDIEDEVPGLLKVIILEDEGLHDLAHPRCMMIEDLYA 185
Query: 322 LGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF- 377
LGRAA E R IA + L+YTSGT G K MLS++NI C +
Sbjct: 186 LGRAAEREEPGRFEAEIALATPQDTALLIYTSGTTGMPKGAMLSNENIMAAIECGARCLP 245
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
LE+ + FLPL HI + V IY + T+ FA+
Sbjct: 246 ALETD--EQLCFLPLCHILERDVSIYFPLASKCTVNFAE 282
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+RL L+L +++ +G+DR R SGAAPIS EL +++ ++ +P+ E FGM+E +G
Sbjct: 355 NFRLWDRLVLRNLRRMLGMDRLRRGGSGAAPISPELLKWYWAIGVPLVEGFGMTETSGIA 414
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
T++ P+ ++ +G+ PG +I D E + G + Y N A+ F G R
Sbjct: 415 TLNTPEANRIGTIGKPAPGVDLRISDEGEIQIRGLNVFQGYWRNNAKTAETFTADGWLR 473
>gi|221504607|gb|EEE30280.1| very long-chain acyl-CoA synthetase, putative [Toxoplasma gondii
VEG]
Length = 921
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 83/134 (61%), Gaps = 5/134 (3%)
Query: 292 KAQCPKLKAIVQYEGK-PD---KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLV 347
+ C L+ IV Y + PD GVIS+++ ++LG A D L +E+ ECC+LV
Sbjct: 400 QGACDVLQMIVVYRDRVPDGYEDDGVISFEDFLQLGTAVNDALLTARMESQKPGECCSLV 459
Query: 348 YTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
YTSGT G K VMLSHDN T+ AAC K++ ++SFLPLSH+AAQ VD+Y +T
Sbjct: 460 YTSGTTGFPKGVMLSHDNFTWTAACSSHMMKIDHTH-RLVSFLPLSHVAAQLVDLYMPVT 518
Query: 408 VAATLWFADKNALK 421
+ ++FA +AL+
Sbjct: 519 MGCCVYFARPDALQ 532
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 67 WKKVTYKLQTT------GVKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVRWLILSK 119
W+K+ KL+ G K +A +AK + A L + P + V LIL +
Sbjct: 554 WEKIEQKLKEVAAARGAGFKNRLAAWAKDVGFRGTEALLNGQSHDVPTAFPFVMKLILHQ 613
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT--VSAPDDFKL 177
V++A+G++ C S AAP+ E ++YF+SL +PI ++G+SE G T + AP +K+
Sbjct: 614 VRKALGMELCLGLGSCAAPLDPETQKYFMSLGMPINSIYGLSESTGPQTFILPAPGWYKV 673
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+G +PGT + + + EG+GEIC +
Sbjct: 674 GSIGHAMPGTDMYVANENAEGHGEICFR 701
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 391 PLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFL 450
P +A + V +S + N++ V + + AI+RAN+K+IS AQ +Q + L
Sbjct: 804 PTEVLAPELVRFFSKNGIQVQTTQEAMNSVGVNQLIREAIERANIKTISRAQSVQGWRVL 863
Query: 451 PADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
P DF+I TGEL TMK++R FV KKY+ ++ Y
Sbjct: 864 PTDFAIDTGELTATMKLRRKFVEKKYEEFVEDMY 897
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y ++ AK L LG +R V I+G N+P W + GAI+ G A G+YTTNS EA
Sbjct: 210 YWNDICMFAKGLLYLGCDRRSRVAIMGCNSPAWAIAYFGAIFVDGVAVGVYTTNSVEATA 269
Query: 267 HCLVTSDANICVVEDDKQLEKILKVK-----AQCPKL-KAIVQYEGKP 308
H + S + VV+ +EK+L+VK A+ +L +A+ EG+P
Sbjct: 270 HVVEHSRCRVAVVDSLANMEKLLQVKKRQQEAREARLQRAVDAVEGRP 317
>gi|47196715|emb|CAF94938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 329
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 70/97 (72%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y++ + L+ KV++A+GLDRC +GAAPI+ + +FLSLDIP+ E++GMSE +G H
Sbjct: 10 SYQIAKKLVFKKVRKALGLDRCSRCYTGAAPITRDTLEFFLSLDIPLYELYGMSESSGPH 69
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
T+S P FKL G +PG +TK+ +PD++G GEIC
Sbjct: 70 TISLPQAFKLTSCGVDLPGCKTKLHNPDKDGVGEICF 106
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 23/86 (26%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGEL-------------------- 461
V A Q +DR N ++ SNAQ+IQK+ L DFSI +GEL
Sbjct: 243 VNAAIQEGVDRVNQRAASNAQRIQKWTVLGRDFSITSGELGECSGRAGSPVMKRGLTGGI 302
Query: 462 ---GPTMKVKRPFVVKKYQSIIDKFY 484
GPTMK+KRP V+K Y+ I++FY
Sbjct: 303 LAAGPTMKLKRPSVLKMYKEEIEEFY 328
>gi|221481631|gb|EEE20013.1| very long-chain acyl-CoA synthetase, putative [Toxoplasma gondii
GT1]
Length = 921
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 83/134 (61%), Gaps = 5/134 (3%)
Query: 292 KAQCPKLKAIVQYEGK-PD---KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLV 347
+ C L+ IV Y + PD GVIS+++ ++LG A D L +E+ ECC+LV
Sbjct: 400 QGACDVLQMIVVYRDRVPDGYEDDGVISFEDFLQLGTAVNDALLTARMESQKPGECCSLV 459
Query: 348 YTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
YTSGT G K VMLSHDN T+ AAC K++ ++SFLPLSH+AAQ VD+Y +T
Sbjct: 460 YTSGTTGFPKGVMLSHDNFTWTAACSSHMMKIDHTH-RLVSFLPLSHVAAQLVDLYMPVT 518
Query: 408 VAATLWFADKNALK 421
+ ++FA +AL+
Sbjct: 519 MGCCVYFARPDALQ 532
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 67 WKKVTYKLQTT------GVKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVRWLILSK 119
W+K+ KL+ G K +A +AK + A L + P + V LIL +
Sbjct: 554 WEKIEQKLKEVAAARGAGFKNRLAAWAKDVGFRGTEALLNGQSHDVPTAFPFVMKLILHQ 613
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT--VSAPDDFKL 177
V++A+G++ C S AAP+ E ++YF+SL +PI ++G+SE G T + AP +K+
Sbjct: 614 VRKALGMELCLGLGSCAAPLDPETQKYFMSLGMPINSIYGLSESTGPQTFILPAPGWYKV 673
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+G +PGT + + + EG+GEIC +
Sbjct: 674 GSIGHAMPGTDMYVANENAEGHGEICFR 701
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 391 PLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFL 450
P +A + V +S + N++ V + + AI+RAN+K+IS AQ +Q + L
Sbjct: 804 PTEVLAPELVRFFSKNGIQVQTTQEAMNSVGVNQLIREAIERANIKTISRAQSVQGWRVL 863
Query: 451 PADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
P DF+I TGEL TMK++R FV KKY+ ++ Y
Sbjct: 864 PTDFAIDTGELTATMKLRRKFVEKKYEEFVEDMY 897
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y ++ AK L LG +R V I+G N+P W + GAI+ G A G+YTTNS EA
Sbjct: 210 YWNDICMFAKGLLYLGCDRRSRVAIMGCNSPAWAIAYFGAIFVDGVAVGVYTTNSVEATA 269
Query: 267 HCLVTSDANICVVEDDKQLEKILKVK-----AQCPKL-KAIVQYEGKP 308
H + S + VV+ +EK+L+VK A+ +L +A+ EG+P
Sbjct: 270 HVVEHSRCRVAVVDSLANMEKLLQVKKRQQEAREARLQRAVDAVEGRP 317
>gi|237843709|ref|XP_002371152.1| very long-chain acyl-CoA synthetase, putative [Toxoplasma gondii
ME49]
gi|211968816|gb|EEB04012.1| very long-chain acyl-CoA synthetase, putative [Toxoplasma gondii
ME49]
Length = 921
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 83/134 (61%), Gaps = 5/134 (3%)
Query: 292 KAQCPKLKAIVQYEGK-PD---KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLV 347
+ C L+ IV Y + PD GVIS+++ ++LG A D L +E+ ECC+LV
Sbjct: 400 QGACDVLQMIVVYRDRVPDGYEDDGVISFEDFLQLGTAVNDALLTARMESQKPGECCSLV 459
Query: 348 YTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
YTSGT G K VMLSHDN T+ AAC K++ ++SFLPLSH+AAQ VD+Y +T
Sbjct: 460 YTSGTTGFPKGVMLSHDNFTWTAACSSHMMKIDHTH-RLVSFLPLSHVAAQLVDLYMPVT 518
Query: 408 VAATLWFADKNALK 421
+ ++FA +AL+
Sbjct: 519 MGCCVYFARPDALQ 532
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 67 WKKVTYKLQTT------GVKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVRWLILSK 119
W+K+ KL+ G K +A +AK + A L + P + V LIL +
Sbjct: 554 WEKIEQKLKEVAAARGAGFKNRLAAWAKDVGFRGTEALLNGQSHDVPTAFPFVMKLILHQ 613
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT--VSAPDDFKL 177
V++A+G++ C S AAP+ E ++YF+SL +PI ++G+SE G T + AP +K+
Sbjct: 614 VRKALGMELCLGLGSCAAPLDPETQKYFMSLGMPINSIYGLSESTGPQTFILPAPGWYKV 673
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+G +PGT + + + EG+GEIC +
Sbjct: 674 GSIGHAMPGTDMYVANENAEGHGEICFR 701
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 391 PLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFL 450
P +A + V +S + N++ V + + AI+RAN+K+IS AQ +Q + L
Sbjct: 804 PTEVLAPELVRFFSKNGIQVQTTQEAMNSVGVNQLIREAIERANIKTISRAQSVQGWRVL 863
Query: 451 PADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
P DF+I TGEL TMK++R FV KKY+ ++ Y
Sbjct: 864 PTDFAIDTGELTATMKLRRKFVEKKYEEFVEDMY 897
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y ++ AK L LG +R V I+G N+P W + GAI+ G A G+YTTNS EA
Sbjct: 210 YWNDICMFAKGLLYLGCDRRSRVAIMGCNSPAWAIAYFGAIFVDGVAVGVYTTNSVEATA 269
Query: 267 HCLVTSDANICVVEDDKQLEKILKVK-----AQCPKL-KAIVQYEGKP 308
H + S + VV+ +EK+L+VK A+ +L +A+ EG+P
Sbjct: 270 HVVEHSRCRVAVVDSLANMEKLLQVKKRQQEAREARLQRAVDAVEGRP 317
>gi|327285516|ref|XP_003227479.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like [Anolis
carolinensis]
Length = 473
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+ Q+ +K+ + ++A S SL+ + + +P+ RL L+L+K++
Sbjct: 131 WEKIMEKIKDVSSQSGFLKKRMLSWAMSVSLERNLNCSNSEL-KPFRMRLAEALVLAKIR 189
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
A+G RC+ SGAAP+ +E+ ++FL L+IP+ + +GMSE G H +S P + G
Sbjct: 190 NALGFSRCQKHFSGAAPLPSEVTQFFLGLNIPLYQAYGMSETTGPHCMSGPYVHRRGSCG 249
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ + G + K+ + D +GNGEIC RTV +L + + + F+ W +
Sbjct: 250 KAVSGCKVKLSNKDTDGNGEICFWG-----RTVFMGYLNMEDKTREA-----FDEDGWLH 299
Query: 242 S-DLGAIYAGGF 252
S DLG I GF
Sbjct: 300 SGDLGKIDRDGF 311
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
DE MELG PD+ LD +L + N+CC L+YTSGT G K MLSHDNIT+ +A +
Sbjct: 2 DEFMELGNEIPDQELDVILRSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHASRA 61
Query: 377 FKLESAAL---SVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ A + +++S+LPLSHIAAQ D+++ + ++FA+ +ALK
Sbjct: 62 GDMQPAEIQQETIVSYLPLSHIAAQIYDLWTGIKWGELVYFAEPDALK 109
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V+ A Q IDR N + +N Q+IQK+ L DFSI GE GPTMK+KR V +KY+ ID
Sbjct: 409 VFGAIQDGIDRVNACAAANVQRIQKWAVLEKDFSISGGEFGPTMKLKRQAVAEKYKEEID 468
Query: 482 KFY 484
FY
Sbjct: 469 SFY 471
>gi|320449658|ref|YP_004201754.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
gi|320149827|gb|ADW21205.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
Length = 644
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI EY V A L LG E + II N PEW Y++LG G + G+Y ++
Sbjct: 42 EITYAEYYEKVLLFAHGLLSLGFEPGERLAIIADNIPEWLYAELGTQAVRGISVGVYQSS 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISW 316
P + L + A+I + ED +Q++K+ +++++ PK++ ++ + K + P ++S+
Sbjct: 102 LPAEIAYMLGYTGASIVLAEDQEQVDKLYEIRSEIPKVRHVIYEDPKGMRSYRDPWLLSF 161
Query: 317 DELMELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+E++E G R PD +++R+L + E C L TSGT G K ML H N+
Sbjct: 162 EEVLERGQEHRRKYPD-AVERLLLEASPEEVCHLSSTSGTTGRPKAAMLRHRNLIHMGVA 220
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
+ + L +SFLPL+ I Q + + +T
Sbjct: 221 LQEVDPLLPTD-DYLSFLPLAWIGEQMMSVAMALT 254
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 106 PYTYRLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P RL WL + ++ +G R R + +G A + ++ R+F ++ + + +++G +
Sbjct: 330 PPGLRLAYWLADQVLFRPLRDQLGFLRLRRAYTGGAALGPDVFRFFHAIGVNLKQIYGQT 389
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
E G V D + D VG IPGT+ +I + E
Sbjct: 390 EIIGIAFVHRDGDVRHDTVGLPIPGTEVRISEEGE 424
>gi|400286540|ref|ZP_10788572.1| AMP-binding protein [Psychrobacter sp. PAMC 21119]
Length = 653
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 7/188 (3%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
+ A ++LGL + +V I+ + EW Y D+G GG G+YTT+SPE + L S
Sbjct: 103 IGMALIELGLSKGDTVSILSEDNKEWLYCDMGICAVGGIPNGVYTTDSPEQLAYILNDSH 162
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGRAAPD- 328
+ +VE+D+QL K L+++ Q P +K ++ +E K + V+ D+L +GR+ +
Sbjct: 163 SKFLIVENDEQLHKFLEIREQTPNVKKVIVFERKGLRSLEDNQVVFLDDLYTIGRSIENA 222
Query: 329 -ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVI 387
E ++ N+ TL+YTSGT G K +L+H N+ F I + +
Sbjct: 223 RERFGAYIDQGTANDIRTLIYTSGTTGNPKGAILTHANVLFELKTSIDILPILPTD-EQL 281
Query: 388 SFLPLSHI 395
FLPL H+
Sbjct: 282 CFLPLCHV 289
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L+L K++ +G+ R + +GAAPIS ++ R+F ++ +PI E +GM+E AG +
Sbjct: 384 YEFWNKLVLYKIRDLIGMSNIRRATTGAAPISLDIIRWFHAIGVPIYEGYGMTESAGVIS 443
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V+ P+ VG+ +P ++ +I D NGEI +K
Sbjct: 444 VNTPEAQMAGSVGKALPDSEVRIAD-----NGEILVK 475
>gi|383456502|ref|YP_005370491.1| putative long-chain-fatty-acid--CoA ligase [Corallococcus
coralloides DSM 2259]
gi|380732729|gb|AFE08731.1| putative long-chain-fatty-acid--CoA ligase [Corallococcus
coralloides DSM 2259]
Length = 606
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 6/215 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y V+ A G + I+ FN W +DLGA+ GG G+YTT+S +
Sbjct: 39 DYAQRVKRFALGLHARGFRDGDPLGILSFNREAWHVADLGAMALGGIPVGLYTTSSVDQL 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP-GVISWDELMELGR 324
++ L +A +VE+ K L L+V+ + P LK ++ + P GV+ + +++ G
Sbjct: 99 VYILGHCEARFLLVENAKHLATGLEVQKRLPALKHLIVVDAPTPLPEGVLRYADVLASGA 158
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI---IQYFKLES 381
A + + + + TL+YTSGT G K V LSH N+ + + + + + +E
Sbjct: 159 KADEAPYWDGVHALHPDGLATLIYTSGTTGQPKGVALSHRNLAWTSKQLSDTLGFRDMED 218
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S+LPLSHIA Q V ++S + + ++FAD
Sbjct: 219 ERL--VSYLPLSHIAEQIVSLHSPLRLGTQVYFAD 251
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYT---YRLVRWLILSKVKQAMGLDRCRVSLSG 135
+KR + +A++T+L+ L + + + L + L+ +K +GL++ ++ +
Sbjct: 292 LKRRLVEWARATALERNTRVLSQERVPSFMEAKFALAQRLVFQPLKTRIGLEKAKLFATS 351
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD 195
AAPI ++ +F S+D+ + EV+GM+E +G TVS + ++ VGR + G + +I +
Sbjct: 352 AAPIGRDVLDFFASIDVVLLEVWGMTEVSGPATVSTAECARMGTVGRPMLGVEVRIAEDG 411
Query: 196 E--EGNGEICL---KEYEANVRTVAKAFLKLG 222
E G +CL + EA +A +L G
Sbjct: 412 EILVKGGNVCLGYHRNPEATQELLADGWLHSG 443
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
++ + Q A +R +S + I++F LP +F+I GEL P+MK++R V +KY +I
Sbjct: 532 RLQQHLQEAFERDVNPKLSRFETIKRFRVLPGEFTIDGGELTPSMKMRRKVVEQKYADVI 591
Query: 481 DKFY 484
+ Y
Sbjct: 592 EALY 595
>gi|383450122|ref|YP_005356843.1| long-chain-fatty-acid--CoA ligase [Flavobacterium indicum
GPTSA100-9]
gi|380501744|emb|CCG52786.1| Long-chain-fatty-acid--CoA ligase [Flavobacterium indicum
GPTSA100-9]
Length = 593
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY +++AFL+L +++ V II N EW D+G + G +Y T + E
Sbjct: 38 EEYLNKANAISRAFLRLNIQKNDKVAIISSTNRTEWHIFDIGILQTGAQTVPIYPTIAAE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S++ C+V D + K+ VKA P L AI ++ P G +W EL+ELG
Sbjct: 98 DYEYILNHSESKYCIVSDLEVYNKLTSVKANIPNLVAIYTFDSIP---GAKNWKELLELG 154
Query: 324 RAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
++S ++ + I T + T++YTSGT G K VML+H NI + +
Sbjct: 155 ADNSNQSEVEARKDAINTTDLATIIYTSGTTGRPKGVMLTHQNIVSDVLMSAERVPFTPG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ HI + + +Y +++FA+
Sbjct: 215 SYRALSFLPICHIFERMI-LYLYQYFGVSVYFAE 247
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + +A +Q Y Y E + ++ R LI SK ++A+G ++ +SG+
Sbjct: 286 TGIKKKLFFWATGLGVQ-YKPYSENGFLYEFQLKIARKLIFSKWQEALG-GELKLLVSGS 343
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVS--APDDFKLDGVGRTIPGTQTKIVDP 194
A + L + F + IP+ E +G++E + +V+ + F++ VG+ + G + KI +
Sbjct: 344 AALQQRLTKTFTAAGIPVMEGYGLTETSPVISVNDMRNNGFRVGTVGKVLNGVEVKIAE- 402
Query: 195 DEEGNGEICLK 205
+GEI K
Sbjct: 403 ----DGEILCK 409
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+ K Q ID N K N +++++FE P +SI G L PTMK+KR +++KY+++
Sbjct: 529 IIKRIQEEIDYYN-KKFGNWEQVKRFELTPDIWSIEQGHLTPTMKLKRKIILEKYKNLYQ 587
Query: 482 KFY 484
K Y
Sbjct: 588 KIY 590
>gi|56696723|ref|YP_167084.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
gi|56678460|gb|AAV95126.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
Length = 628
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 14/240 (5%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y + + + A KLGL+R V I+ + EW + D+G GG A+G+YTT+S
Sbjct: 66 DYWQHAKWIGLALRKLGLKRGEVVSILSEDRKEWAWFDMGIQAVGGIASGVYTTDSANQL 125
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV--QYEGKPD--KPGVISWDELME 321
+ + SD+ + E+++QL+K L+++ + P L ++ + EG D P + D L E
Sbjct: 126 KYLINDSDSRFLIAENEEQLDKYLQIEGEVPGLLNVIILEDEGLHDLNHPRCMMIDRLYE 185
Query: 322 LGRAAPDE---SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+GR A E + + + I + L+YTSGT G K ML+H+NI
Sbjct: 186 IGREAEKEEPGAFEAEIAQIRPEDVALLIYTSGTTGMPKGAMLTHENIMAGIEAGAHRLP 245
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK------NALKVYKATQAAIDR 432
E + FLPL HI + V IY + T+ FA+ N +V AT A+ R
Sbjct: 246 TEETD-EQLCFLPLCHILERDVSIYFPLASKCTVNFAESPETVFANLQEVSPATFTAVPR 304
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L +++ +G+D+ R +GAAPIS EL +++ ++ +P+ E +GM+E AG T++ P++
Sbjct: 362 LVLRNLRRMLGMDKMRRGGTGAAPISPELLKWYWAIGVPLVEGYGMTETAGIATINTPEE 421
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
++ +GR +PG +I + E + G K Y N A++F G R
Sbjct: 422 NRIGTIGRVVPGIDVRIAEGGEIQVRGLNIFKGYWRNNEKTAESFTDDGWLR 473
>gi|218781722|ref|YP_002433040.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218763106|gb|ACL05572.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 599
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 101/219 (46%), Gaps = 10/219 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y N R F LG+ER + I N EW YSD+G + G +Y T + E
Sbjct: 37 QYYENARAAGLGFASLGVERGDRIGIFSDNYLEWLYSDMGGLGIGAVVVPLYPTLTEEEA 96
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PGVISWDELMELG 323
+ + S VV D +QLEK +++A P L+AIV P G+IS+ LME+G
Sbjct: 97 GYIVQDSGCKALVVGDKEQLEKAKRIRAANPSLQAIVTIGDVPTNGDGGLISFVRLMEMG 156
Query: 324 RAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF---NAACIIQYF 377
++ +R + T+VYTSGT G K VM++H NI F A I +
Sbjct: 157 VKKNEQDPGLFERSAAMSKPADLATIVYTSGTTGMPKGVMITHQNIMFVIQGLAGITPGY 216
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
E + FLPL H+ + D Y M T FA+
Sbjct: 217 ADEKD--QTVPFLPLCHVFGRIADHYMGMYAGITASFAE 253
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
YRL L+ K++ +G R + ++ P + E++ +F + I + E +G++E
Sbjct: 327 YRLAYQLVFKKLQDRLG-GRVKYIMAAGGPTAREIQLFFNAAGISVVEGYGLTETTAPAA 385
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+S D+++ VG +PG KI +GE+ +K
Sbjct: 386 LSNLSDYRIGTVGPPLPGVDVKIAS-----DGEVLIK 417
>gi|401397992|ref|XP_003880190.1| putative very long-chain acyl-CoA synthetase [Neospora caninum
Liverpool]
gi|325114599|emb|CBZ50155.1| putative very long-chain acyl-CoA synthetase [Neospora caninum
Liverpool]
Length = 912
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 82/132 (62%), Gaps = 7/132 (5%)
Query: 295 CPKLKAIVQY-----EGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYT 349
C L+ IV Y EG D GVIS+++ ++LG A D L +ET ECC+LVYT
Sbjct: 394 CDVLQMIVVYRERVPEGYEDD-GVISFEDFVQLGSAVNDVLLTARMETQKPGECCSLVYT 452
Query: 350 SGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVA 409
SGT G K VMLSHDN T+ AAC K++ ++SFLPLSH+AAQ VD+Y +T+
Sbjct: 453 SGTTGFPKGVMLSHDNFTWTAACSSHMMKIDHTH-RLVSFLPLSHVAAQLVDLYMPVTMG 511
Query: 410 ATLWFADKNALK 421
++FA +AL+
Sbjct: 512 CCVYFARPDALQ 523
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query: 67 WKKVTYKLQT------TGVKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVRWLILSK 119
W+K+ KL+ +G K IA +AK+ + A L + + P + V LIL +
Sbjct: 545 WEKIEQKLKEVAAARGSGFKSRIAEWAKNVGFRGTEALLNGHTQDIPAAFTFVMRLILHQ 604
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT--VSAPDDFKL 177
V++A+G+D C S AAP+ E ++YF+SL +PI ++G+SE G T + AP +K+
Sbjct: 605 VRKALGMDLCLGLGSCAAPLDPETQKYFMSLGMPINSIYGLSESTGPQTFILPAPGWYKV 664
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+G +PGT + + +EEG+GEIC +
Sbjct: 665 GSIGHALPGTDMYVANENEEGHGEICFR 692
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
+A V + AI+RAN+K+IS AQ +Q + LPADF+I TGEL TMK++R FV K+
Sbjct: 822 DAPGVNHLIREAIERANIKTISRAQSVQGWRILPADFAISTGELTATMKLRRKFVETKFA 881
Query: 478 SIIDKFY 484
S ++ Y
Sbjct: 882 SFVEDMY 888
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y ++ AKA L LG +R + ++G N+P W GAI+ G A G+YTTNS EA
Sbjct: 227 YWNDICMFAKALLYLGCDRRSRIALMGCNSPAWAIGYFGAIFIDGIAVGIYTTNSVEATA 286
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQ 294
H + + + VV+ +EK+L+VK +
Sbjct: 287 HVVEHARCRVAVVDSLANMEKLLQVKKK 314
>gi|347755175|ref|YP_004862739.1| Long-chain acyl-CoA synthetase [Candidatus Chloracidobacterium
thermophilum B]
gi|347587693|gb|AEP12223.1| Long-chain acyl-CoA synthetases (AMP-forming) [Candidatus
Chloracidobacterium thermophilum B]
Length = 618
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 14/220 (6%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
+ VR FL LG+ R V ++ N EW +D+ + G +Y T++
Sbjct: 49 FAERVRKARAGFLALGIRRGDRVGLLSENRLEWTITDVALLSCGAVDVPIYATSTGSQIA 108
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE------GKPDKPGVISWDELM 320
+ + + A V+ + KQ +K+ + P+LK IV ++ P + V++++EL
Sbjct: 109 YIINDAGAEALVLSNQKQFDKVAAAIGEMPQLKFIVTFDPINVTAPLPSRVKVLTFEELA 168
Query: 321 ELG-RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+LG R + + LD ++ + + TL+YTSGT G K VML+HDN+TFN ++
Sbjct: 169 QLGDRGSVGDFLDEMVRAASPEDLATLIYTSGTTGDPKGVMLTHDNLTFNLVANVERLTD 228
Query: 380 ESAALSVISFLPLSHIAAQTVD---IYSVMTVAATLWFAD 416
+ +S+LPLSH+ +TV +YS ++V +FA+
Sbjct: 229 LGPEDTALSYLPLSHVYERTVMNVFVYSGVSV----YFAE 264
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+KI+ L + +I GEL PT+KVKR V +KY++ ID YD
Sbjct: 565 EKIKNIALLENELTIEGGELTPTLKVKRRVVDEKYKAEIDAIYD 608
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 38/213 (17%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYT--YRLVRWLILSKVKQAMGLDRCRVSLSG 135
G+K + +A T ++ A NV + Y + L+LSK++ + R + SG
Sbjct: 304 GLKTKLFTWAMETGREYSRALHRGNVPPMLSLQYDIAYALVLSKIRNKIA-PRIKFFSSG 362
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD 195
A ++ ++ F + + I + +G++E + T + + + VG+ + G + KI PD
Sbjct: 363 GAALAEDVMHAFSGMGLTILQGYGLTETSPVITSNTKHENRPGTVGKPLRGVEIKIA-PD 421
Query: 196 EE--GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
E G ++ Y A+ G WF++ D+G I A GF
Sbjct: 422 GEILTRGRHVMRGYYNKPDKTAEVLTPDG----------------WFHTGDIGEIDADGF 465
Query: 253 -------------AAGMYTTNSPEACLHCLVTS 272
+ G Y +P+ + LVTS
Sbjct: 466 LRITDRKKDLFKTSGGKYI--APQPIENALVTS 496
>gi|309810444|ref|ZP_07704271.1| AMP-binding enzyme [Dermacoccus sp. Ellin185]
gi|308435596|gb|EFP59401.1| AMP-binding enzyme [Dermacoccus sp. Ellin185]
Length = 613
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 4/193 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+ + + R +A + LG++ V I EW +DLG + AG +Y T+
Sbjct: 54 QTDTHARQIAAGLVALGVDAEDRVAIASSTRLEWVLADLGNMLAGAATTTVYPTSQLADV 113
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
+H L S + + ED Q+EK+ + Q P + +V ++G+ D V++ DEL ELGR
Sbjct: 114 VHILTDSGSRVVFAEDTGQVEKLRSGREQIPDVVKVVVFDGEGDGEWVMTLDELRELGRT 173
Query: 326 APDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+E+ D + + +A TL+YTSGT G +K V LSHD T+ A+ + L +
Sbjct: 174 RLEETPDVIDDRVAGIKPQHLATLIYTSGTTGKAKGVRLSHDCWTYEASAVDSTGLLNAG 233
Query: 383 ALSVISFLPLSHI 395
+ + +LPLSH+
Sbjct: 234 DVQYL-WLPLSHV 245
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +D NL+ ++ ++I++F LP D S+ GE+ P+MK+KR VVKK++ +D+ Y
Sbjct: 555 QGYVDEMNLR-LNRWEQIKRFIILPRDLSVEEGEITPSMKIKRRVVVKKFKDDLDELY 611
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L +ILSK++ G R +SG+A ++ ++ +F ++ +PI E +G+SE + A +
Sbjct: 339 YKLADKIILSKIRARFG-GHVRYFISGSAALNKDIALWFSAIGLPILEGYGLSESSAAAS 397
Query: 169 VSAP--DDFKLDGVGRTIPGTQTKIVDPDE 196
V+ P ++ VG +PGT+ K+ + DE
Sbjct: 398 VNRPYLGANQVGTVGWPLPGTEFKLGEDDE 427
>gi|218296527|ref|ZP_03497255.1| AMP-dependent synthetase and ligase [Thermus aquaticus Y51MC23]
gi|218243069|gb|EED09601.1| AMP-dependent synthetase and ligase [Thermus aquaticus Y51MC23]
Length = 644
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 10/215 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ EY V A L LG + II N PEW Y++LGA G + G+Y +
Sbjct: 42 EVTYGEYYEKVLLFAHGLLSLGFAPGDRLAIIADNIPEWLYAELGAQAVRGISVGVYQSG 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISW 316
P + L + A++ + ED +Q++K+ +V+ + PK++ ++ + K + P ++S+
Sbjct: 102 LPSEIAYMLSYTGASVVLAEDQEQVDKLYEVRGEIPKVRHVIYEDEKGMRGYRDPWLLSF 161
Query: 317 DELMELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+E++E G R PD +++R+L + E C L TSGT G K ML H N+
Sbjct: 162 EEVLERGREHRRKHPD-AVERLLLEASPEEVCHLSSTSGTTGRPKAAMLRHRNMVHMGVA 220
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
+ + L +SFLPL+ I Q + + +T
Sbjct: 221 LQEVDPLLPTD-DYLSFLPLAWIGEQMMSVAMALT 254
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 106 PYTYRLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P RL WL + ++ +G R R + +G A + ++ R+F ++ + + +++G +
Sbjct: 330 PLGLRLAYWLADQVLFKPLRDQLGFLRLRRAYTGGAALGPDVFRFFHAIGVNLKQIYGQT 389
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
E G V D + D VG+ IPGT+ +I + GEI L+
Sbjct: 390 EINGIAFVHRDGDVRHDTVGKPIPGTEVRISE-----EGEILLR 428
>gi|54307638|ref|YP_128658.1| long-chain-fatty-acid-CoAligase [Photobacterium profundum SS9]
gi|46912061|emb|CAG18856.1| putative long-chain-fatty-acid-CoAligase [Photobacterium profundum
SS9]
Length = 604
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E+ ++ +A A L G+ V I N P W +D A+Y +Y+TN
Sbjct: 35 DITWNEFGEQIQQLAIAMLAHGMNVQDKVAIFSNNMPRWTVTDFAALYNRCVTVPIYSTN 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+P+ + L +D + V + QL+ + + CPKL+ IV PD P V S++
Sbjct: 95 TPQQAAYVLNDADVRLLFVGEQVQLDAAIGIAEGCPKLERIVTLSDDLVLPDNPLVCSFN 154
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ + + L + L A ++ TL+YTSGT G K VML + NI A Q
Sbjct: 155 DFLCAATPELEAELQQRLNDTAMDDLLTLIYTSGTTGTPKGVMLDYANIAAQLAGHDQNL 214
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L+ S + FLPLSH+ + Y + A + D N LK
Sbjct: 215 SLDEGD-SSLCFLPLSHVFERAWTFYVLHRGAINHYLTDTNQLK 257
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
++ L L+LSK++ +G + G A + + R+F ++ I + +GM+E
Sbjct: 324 SHNLANKLVLSKLRDILG-GNIKFMPCGGAKLDEGIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G +PG + KI + +E G + ++ Y AK F + G
Sbjct: 381 TVSCWDDQCFNPDSIGMAMPGAEIKIGENNEILVRGPMVMRGYYNMPEETAKNFTEDGF 439
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++K LP FS+ GEL PT K++R + +Y I++ Y+
Sbjct: 547 KDLARFEQVKKITLLPKAFSMDKGELTPTQKLRRKVIHDRYHQEIERMYE 596
>gi|298207821|ref|YP_003716000.1| long chain fatty-acid CoA ligase [Croceibacter atlanticus HTCC2559]
gi|83850459|gb|EAP88327.1| probable long chain fatty-acid CoA ligase [Croceibacter atlanticus
HTCC2559]
Length = 592
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 214 VAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTS 272
+++ LKLG++ + II N EW D+G + G +Y T S E + L S
Sbjct: 47 LSRGLLKLGVKPNDKIAIISTNNRTEWNIVDMGVLQIGAQDVPIYPTISEEDYEYVLNHS 106
Query: 273 DANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPD-ESL 331
++ C V D++ L K+ K+KA P LK + ++ G +WDE+++LG + E +
Sbjct: 107 ESTYCFVSDEEVLNKVNKIKANVPSLKEVYTFDSIN---GAKNWDEVLKLGEDKTNQEEV 163
Query: 332 DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLP 391
+ ++ + ++ TL+YTSGT G K VMLSH NI NA L +SFLP
Sbjct: 164 ETLMANVKEDDLATLIYTSGTTGRPKGVMLSHKNIVSNALASATRLPLNQGNEKALSFLP 223
Query: 392 LSHIAAQTVDIYSVMTVAATLWFAD 416
+ HI + + Y ++FA+
Sbjct: 224 VCHIYERMLQ-YLYQYKGVNIYFAE 247
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TGVK+ + +A L+ Y Y + ++ R LI SK ++A+G + SG+
Sbjct: 286 TGVKKALFFWAVELGLK-YEPYGQNGWWYEQKLKVARKLIFSKWQEALG-GNLKAIASGS 343
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDP 194
A + L R F + +P+ E +G++E + +V+ D ++ VG+ +P + KI D
Sbjct: 344 AALQPRLARVFNAGGVPVMEGYGLTETSPVVSVNDMRDGGLRIGTVGKLLPDVEVKIAD- 402
Query: 195 DEEGNGEICLK 205
+GEI +K
Sbjct: 403 ----DGEILVK 409
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K Q +D N +S + +KI++FE P +SI L PTMK+KR V +KY +
Sbjct: 527 EVVKRIQEEVDFYN-QSFGHWEKIKRFELTPDVWSIEEEHLTPTMKLKRRVVKEKYLDLY 585
Query: 481 DKFYD 485
+K YD
Sbjct: 586 NKIYD 590
>gi|402493849|ref|ZP_10840598.1| long chain fatty-acid CoA ligase [Aquimarina agarilytica ZC1]
Length = 590
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNA-PEWFYSDLGAIYAGGFAAGMYTT 259
E ++Y +++ L+LG++ + II N EW D+G + G +Y T
Sbjct: 34 ETSTQDYINKANQISRGLLRLGVKPNDKIAIISTNNRTEWNIVDIGVLQIGAQDVPIYPT 93
Query: 260 NSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDEL 319
S E + L S++ V DD+ K++ +K Q P +K + ++ +W E+
Sbjct: 94 ISEEDYQYVLNHSESTYVFVSDDEVYTKVMNIKDQVPSIKGVYSFD---TINACANWSEV 150
Query: 320 MELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ELG+ +++ + ++++I N+ TL+YTSGT G K VMLSH NI NA + F
Sbjct: 151 LELGKDDSNQNEVQNLMDSINENDLATLIYTSGTTGRPKGVMLSHRNIVRNAINSSKRFD 210
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++ +SFLP+ H+ + + +Y + +++FA+
Sbjct: 211 IDEGNAKALSFLPVCHVYERML-LYLYQYRSISIYFAE 247
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + +A L Y Y + + + R LI SK ++ +G ++ SG+
Sbjct: 286 TGIKKKLFFWAIDLGL-IYEPYGQNGAWYEFKLGIARKLIFSKWQEGLG-GNLKIIASGS 343
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVS--APDDFKLDGVGRTIPGTQTKIVDP 194
A + + L R F + I + E +G++E + +V+ + FK+ VG+ + T I +
Sbjct: 344 AALQSRLARVFNAAGINVMEGYGLTETSPVISVNDIRNNGFKIGTVGKVLDETTVTIAED 403
Query: 195 DE 196
E
Sbjct: 404 GE 405
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V K + +D+ N K +++++FE P ++S+ +G L PT K+KR + + ++ +
Sbjct: 528 VIKRIKEEVDQYNAK-FGKWEQVKRFELTPVEWSVDSGHLTPTFKLKRKIIKEIHKDLYT 586
Query: 482 KFY 484
+ Y
Sbjct: 587 EIY 589
>gi|294508414|ref|YP_003572472.1| long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
gi|294344742|emb|CBH25520.1| Long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
Length = 632
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 114/243 (46%), Gaps = 13/243 (5%)
Query: 181 GRTIPGTQTKIVDPDEEGNG--EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPE 238
GR P + K+ G+G EI + ++ V+ +A + + V ++ N PE
Sbjct: 23 GRERPVLRHKV-----RGDGWQEITWEGFQDRVQALAGYLHRQSVREGDRVALLSENRPE 77
Query: 239 WFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKL 298
W SDLG G +YT+ P H L S A +C+V Q +KI ++ CP+L
Sbjct: 78 WAVSDLGTQLIGAANVSIYTSLPPSKVAHILRDSGAKVCIVSVPVQRKKIEEIADTCPEL 137
Query: 299 KAIVQYEGKPDKPGV--ISWDELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTE 353
+ ++ D P V WD+ + GR + + L + E+IA + L+YTSGT
Sbjct: 138 EEVIVMSETADDPPVPMTHWDDALAAGREHWSEHEAELTGIAESIAPGDTSALIYTSGTT 197
Query: 354 GASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
G K V+L+H N N ++ + +SFLPLSH +T +V+ AT+
Sbjct: 198 GQPKGVVLTHRNFCSNVKGALRRIPIGEDDHH-LSFLPLSHAFERTAGHTAVLAAGATIS 256
Query: 414 FAD 416
+A+
Sbjct: 257 YAE 259
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 67 WKKVTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYR----LVRWLILSKVK 121
+K+VT + + G +K+ + ++A +H A + R + L+ SK+
Sbjct: 287 YKRVTKQAKEGGPLKQALFDWAVGVGERHAEAQQKTGSGPSLLLRGQRAVAHRLVFSKLH 346
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+ +G + R + SG A + E+ +F + + I E +G++E A T++ D + VG
Sbjct: 347 EKLGGN-LRFAASGGAALPEEIGTFFQAAGVTIIEGYGLTETAPVLTINPLDAPRYGTVG 405
Query: 182 RTIPGTQTKIVDPDEEGN--GEICLKEYEANVRTVAKAFLKLG 222
+PG T + P EE G + +Y ++ T L G
Sbjct: 406 HVMPGV-TVAIQPLEENEPAGAVSGSDYPTSLSTPEGEILVKG 447
>gi|423134174|ref|ZP_17121821.1| hypothetical protein HMPREF9715_01596 [Myroides odoratimimus CIP
101113]
gi|423326892|ref|ZP_17304700.1| hypothetical protein HMPREF9711_00274 [Myroides odoratimimus CCUG
3837]
gi|371646931|gb|EHO12441.1| hypothetical protein HMPREF9715_01596 [Myroides odoratimimus CIP
101113]
gi|404607462|gb|EKB06964.1| hypothetical protein HMPREF9711_00274 [Myroides odoratimimus CCUG
3837]
Length = 591
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY V++A L+LG+E + +I N +W D+G + G +Y T + E
Sbjct: 38 QEYIDKANMVSRALLRLGIEANDKIAVISTNNQTKWNLLDIGILQIGAQNVPIYPTIAAE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L ++A CVV D + K++ VK Q P L+ I +E G ++DE++ELG
Sbjct: 98 DYQYILSHAEAKYCVVSDQEIYNKLISVKDQLPLLQGICSFE---HIEGCKTFDEILELG 154
Query: 324 RAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL-ES 381
R + E +DR+ ++I + TL+YTSGT G K VMLSH+NI N
Sbjct: 155 RDTSNQEEVDRIKDSITPDHLATLIYTSGTTGRPKGVMLSHNNILSNVIGSWDRVPFGRE 214
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPL H+ + + IY ++++A+
Sbjct: 215 DHYKALSFLPLCHVFERML-IYLYQFSGTSIYYAE 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 24/180 (13%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRL--VRWLILSKVKQAMGLDRCRVSLS 134
TG+K+ I +A Q Y Y N S Y ++L R L+ SK ++ +G + ++ +S
Sbjct: 287 TGIKKRIFFWALELGFQ-YKPY---NRSAFYNFQLKIARKLVFSKWQEGLG-GQMKIIVS 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+AP+ L + F + IP+ E +G++E + +V+ + + VGR + + KI
Sbjct: 342 GSAPLQARLSKVFNAAGIPVMEGYGLTETSPVISVNDARNGGLRFGTVGRPLSNVEVKIA 401
Query: 193 DPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
+ +GEI K V + K E+ +SV G+ E D+G I GF
Sbjct: 402 E-----DGEILCK-----APNVMMGYFK-DEEKTNSVIKDGYFHTE----DIGKIDEDGF 446
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 425 ATQAAIDR------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 478
Q IDR A K ++++KFE P +SI + L PT+K++R +++K++
Sbjct: 524 TNQKVIDRVAEEVEAVNKKFGKWEQVKKFELTPDVWSIDSEHLTPTLKLRRRIILEKHKD 583
Query: 479 IIDKFY 484
+ DK Y
Sbjct: 584 LYDKIY 589
>gi|373110458|ref|ZP_09524727.1| hypothetical protein HMPREF9712_02320 [Myroides odoratimimus CCUG
10230]
gi|423130473|ref|ZP_17118148.1| hypothetical protein HMPREF9714_01548 [Myroides odoratimimus CCUG
12901]
gi|371643100|gb|EHO08658.1| hypothetical protein HMPREF9712_02320 [Myroides odoratimimus CCUG
10230]
gi|371645056|gb|EHO10584.1| hypothetical protein HMPREF9714_01548 [Myroides odoratimimus CCUG
12901]
Length = 591
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY V++A L+LG+E + +I N +W D+G + G +Y T + E
Sbjct: 38 QEYIDKANMVSRALLRLGIEANDKIAVISTNNQTKWNLLDIGILQIGAQNVPIYPTIAAE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L ++A CVV D + K++ VK Q P L+ I +E G ++DE++ELG
Sbjct: 98 DYQYILSHAEAKYCVVSDQEIYNKLISVKDQLPLLQGICSFE---HIEGCKTFDEILELG 154
Query: 324 RAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL-ES 381
R + E +DR+ ++I + TL+YTSGT G K VMLSH+NI N
Sbjct: 155 RDTSNQEEVDRIKDSITPDHLATLIYTSGTTGRPKGVMLSHNNILSNVIGSWDRVPFGRE 214
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPL H+ + + IY ++++A+
Sbjct: 215 DHYKALSFLPLCHVFERML-IYLYQFSGTSIYYAE 248
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 24/180 (13%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRL--VRWLILSKVKQAMGLDRCRVSLS 134
TG+K+ I +A Q Y Y N S Y ++L R L+ SK ++ +G + ++ +S
Sbjct: 287 TGIKKRIFFWALELGFQ-YKPY---NRSAFYNFQLKIARKLVFSKWQEGLG-GQMKIIVS 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+AP+ L + F + IP+ E +G++E + +V+ + + VGR + + KI
Sbjct: 342 GSAPLQARLSKVFNAAGIPVMEGYGLTETSPVISVNDARNGGLRFGTVGRPLSNVEVKIA 401
Query: 193 DPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
+ +GEI K V + K E+ +SV G+ E D+G I GF
Sbjct: 402 E-----DGEILCK-----APNVMMGYFK-DEEKTNSVIKDGYFHTE----DIGRIDEDGF 446
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 425 ATQAAIDR------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 478
Q IDR A K ++++KFE P +SI + L PT+K++R +++K++
Sbjct: 524 TNQKVIDRVAEEVEAVNKKFGKWEQVKKFELTPDVWSIDSEHLTPTLKLRRRIILEKHKD 583
Query: 479 IIDKFY 484
+ DK Y
Sbjct: 584 LYDKIY 589
>gi|400753120|ref|YP_006561488.1| long-chain-fatty-acid-CoA ligase [Phaeobacter gallaeciensis 2.10]
gi|398652273|gb|AFO86243.1| putative long-chain-fatty-acid-CoA ligase [Phaeobacter
gallaeciensis 2.10]
Length = 645
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 30/249 (12%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y + + + LGLER V I+ + EW Y D+G AG A+G+YTT+S +
Sbjct: 83 QDYWDHAEKIGLGLMALGLERGEVVSILSEDRKEWLYLDMGIQGAGAIASGVYTTDSAQQ 142
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLK--AIVQYEGKPD--KPGVISWDELM 320
+ + S + VVE+D+QL+K L+++A+ P L+ I+ +G D + D+L
Sbjct: 143 LAYLVNDSGSRFLVVENDEQLDKFLEIEAEVPHLRWVIILDRDGLHDLRHEKCLFLDQLY 202
Query: 321 ELGRA---APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ G A A + + + ++ L+YTSGT G K MLSH+NI
Sbjct: 203 DQGAAFKIANPTAFEDAVARSRLDDTALLIYTSGTTGLPKGAMLSHENILAT-------- 254
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADK------NALKVY 423
+ES A S+ + FLPL HI + V +Y M +T+ FA+ N +V
Sbjct: 255 -MESGARSLECYATDEQLCFLPLCHILERNVSVYLPMAAGSTVNFAESPETVFDNIQEVS 313
Query: 424 KATQAAIDR 432
AT A+ R
Sbjct: 314 PATFFAVPR 322
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
YR+ L+L +++ +GLDR R +GAAPIS EL R++ S+ +P+ E +GM+E AG
Sbjct: 374 YRIWDLLVLRNLRRMLGLDRLRRGGTGAAPISPELLRWYWSIGVPLIEGYGMTENAGLTA 433
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEE 197
+ + VG+ +PG + +I PD E
Sbjct: 434 ANRVLSHRPGTVGQAVPGVEIRIA-PDGE 461
>gi|83815592|ref|YP_446479.1| AMP-binding protein [Salinibacter ruber DSM 13855]
gi|83756986|gb|ABC45099.1| AMP-binding enzyme, putative [Salinibacter ruber DSM 13855]
Length = 632
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 13/243 (5%)
Query: 181 GRTIPGTQTKIVDPDEEGNG--EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPE 238
GR P + K+ G+G EI + ++ V+ +A + + V ++ N PE
Sbjct: 23 GRERPVLRHKV-----RGDGWQEITWEGFQDRVQALAGYLHRQSVREGDRVALLSENRPE 77
Query: 239 WFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKL 298
W SDLG G +YT+ P H L S A +C+V Q +KI ++ CP+L
Sbjct: 78 WAVSDLGTQLIGAANVSIYTSLPPSKVAHILRDSGAKVCIVSVPVQRKKIEEIADTCPEL 137
Query: 299 KAIVQYEGKPDKPGV--ISWDELMELGRAAPDE---SLDRVLETIATNECCTLVYTSGTE 353
+ ++ D P V WD+ + GR E L + E+IA + L+YTSGT
Sbjct: 138 EEVIVMSETADDPPVPMTHWDDALAAGREHWSEHEAELTGIAESIAPGDTSALIYTSGTT 197
Query: 354 GASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
G K V+L+H N N ++ + +SFLPLSH +T +V+ AT+
Sbjct: 198 GQPKGVVLTHRNFCSNVKGALRRIPIGEDDHH-LSFLPLSHAFERTAGHTAVLAAGATIS 256
Query: 414 FAD 416
+A+
Sbjct: 257 YAE 259
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 67 WKKVTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYR----LVRWLILSKVK 121
+K+VT + + G +K+ + ++A +H A + R + L+ SK+
Sbjct: 287 YKRVTKQAKEGGPLKQALFDWAVGVGERHAEAQQKTGSGPNLLLRGQRAVAHRLVFSKLH 346
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+ +G + R + SG A + E+ +F + + I E +G++E A T++ D + VG
Sbjct: 347 EKLGGN-LRFAASGGAALPEEIGTFFQAAGVTIIEGYGLTETAPVLTINPLDAPRYGTVG 405
Query: 182 RTIPGTQTKIVDPDEEGN--GEICLKEYEANVRTVAKAFLKLG 222
+PG T + P EE G + +Y ++ T L G
Sbjct: 406 HVMPGV-TVAIQPLEENEPAGAVSGSDYPTSLSTPEGEILVKG 447
>gi|374368696|ref|ZP_09626742.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
gi|373099819|gb|EHP40894.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
Length = 562
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 9/213 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E V VA +LGL V ++ EW +SDLGA+ AG +G+Y T+SP
Sbjct: 49 REVGEIVADVAAGLAELGLRAGEVVSVLSNTNREWVWSDLGALTAGAVVSGIYPTDSPAQ 108
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELM 320
+ S + + VE+++QL+K L+V+ + P+++ +V Y+ + D P V+S+D L+
Sbjct: 109 VEYLCHDSGSVMLFVENEEQLDKYLEVRERLPRVRKVVVYDMEGLASFDDPAVLSFDALL 168
Query: 321 ELGRAAPDESLDRVLETIA---TNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
LGR V +A + LVYTSGT G K MLSH N+ + ++ F
Sbjct: 169 ALGRQTRARQAGLVQARLAAGSADALAVLVYTSGTTGRPKGAMLSHRNV-LRSCLTLRDF 227
Query: 378 KLESAALSVISFLPLSHIAAQTV-DIYSVMTVA 409
+ ++FLPL H++ + + YS+++ A
Sbjct: 228 LPATTIGERMAFLPLCHVSERIFGEYYSILSGA 260
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L V++ MGL+R +++++GAAPIS +L R++++L I + E++GM+E GA T + P
Sbjct: 293 LVLGNVRRMMGLNRVQLAVTGAAPISPDLIRWYMALGIVLHELWGMTEITGAATCNPPGR 352
Query: 175 FKLDGVGRTIPGTQTKI 191
+ +G +P T+ K+
Sbjct: 353 MRPGSIGIALPHTEVKV 369
>gi|410697723|gb|AFV76791.1| AMP-forming long-chain acyl-CoA synthetase [Thermus oshimai JL-2]
Length = 642
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 10/215 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI EY V A L LG + I+ N PEW Y++LGA G + G+Y ++
Sbjct: 40 EITYAEYYEKVLLFAHGLLSLGFNPGDRLAILADNIPEWLYAELGAQAVRGISVGVYQSS 99
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVIS 315
P + L + A+I + ED +Q++K+ +++ + P+++ ++ YE G P ++S
Sbjct: 100 LPPEIAYMLTYTGASIVLAEDQEQVDKLYEIRNEIPQVRHVI-YEDEKGMGGYRDPWLLS 158
Query: 316 WDELMELG---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ E++E G R E+++++L + + E C L TSGT G K ML H N+
Sbjct: 159 FQEVLERGREHRTKHPEAVEKLLLSASPEEVCHLSSTSGTTGRPKAAMLRHRNMVHMGVA 218
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
+ + L + +SFLPL+ I Q + + +T
Sbjct: 219 LQEVDPL-APTDDYLSFLPLAWIGEQMMSVAMALT 252
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 106 PYTYRLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P RL WL + ++ +G R R + +G A + + R+F ++ + + +++G +
Sbjct: 328 PLALRLAYWLSDQLLFKPLRDQLGFLRLRRAYTGGAALGPDTFRFFHAIGVNLKQIYGQT 387
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
E G V D + D VG+ IPGT+ +I + E
Sbjct: 388 EIIGIAFVHRDGDIRYDTVGKPIPGTEVRISEEGE 422
>gi|399991476|ref|YP_006571716.1| long-chain-fatty-acid-CoA ligase [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398656031|gb|AFO89997.1| putative long-chain-fatty-acid-CoA ligase [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 645
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 30/249 (12%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y + + + LGLER V I+ + EW Y D+G AG A+G+YTT+S +
Sbjct: 83 QDYWDHAEKIGLGLMALGLERGEVVSILSEDRKEWLYLDMGIQGAGAIASGVYTTDSAQQ 142
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLK--AIVQYEGKPD--KPGVISWDELM 320
+ + S + VVE+D+QL+K L+++A+ P L+ I+ +G D + D+L
Sbjct: 143 LAYLVNDSGSRFLVVENDEQLDKFLEIEAEVPHLRWVIILDRDGLHDLRHEKCLFLDQLY 202
Query: 321 ELGRA---APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ G A A + + + ++ L+YTSGT G K MLSH+NI
Sbjct: 203 DQGAAYKIANPTAFEDAVGRSRPDDTALLIYTSGTTGLPKGAMLSHENILAT-------- 254
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADK------NALKVY 423
+ES A S+ + FLPL HI + V +Y M +T+ FA+ N +V
Sbjct: 255 -MESGARSLECYATDEQLCFLPLCHILERNVSVYLPMAAGSTVNFAESPETVFDNIQEVS 313
Query: 424 KATQAAIDR 432
AT A+ R
Sbjct: 314 PATFFAVPR 322
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
YR+ L+L +++ +GLDR R +GAAPIS EL R++ S+ +P+ E +GM+E AG
Sbjct: 374 YRIWDLLVLRNLRRMLGLDRLRRGGTGAAPISPELLRWYWSIGVPLIEGYGMTENAGLTA 433
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEE 197
+ + VG+ +PG + +I PD E
Sbjct: 434 ANRVLSHRPGTVGQAVPGVEIRIA-PDGE 461
>gi|390955718|ref|YP_006419476.1| AMP-forming long-chain acyl-CoA synthetase [Aequorivita
sublithincola DSM 14238]
gi|390421704|gb|AFL82461.1| AMP-forming long-chain acyl-CoA synthetase [Aequorivita
sublithincola DSM 14238]
Length = 593
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 9/223 (4%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAA 254
NGE +EY +++A +++ ++ V +I N EW D+G + G
Sbjct: 29 NGEWKATSTQEYLDKANQISRALIEMDVKPNDKVALISTTNRTEWNICDIGIMQTGAQDV 88
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T S E + L S+A C V D + +K++ +KA P LK + ++ GV
Sbjct: 89 PVYPTISQEEYEYVLNHSEAVYCFVSDKEVYDKVMAIKANVPSLKEVYSFD---QIEGVK 145
Query: 315 SWDELMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+W E++E G+ + E LD+ I+ ++ TL+YTSGT G K VMLSH NI NA
Sbjct: 146 NWSEVLETGKDTKNQEELDKRKAAISEDDVATLIYTSGTTGKPKGVMLSHKNIATNAKFS 205
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ ++ S +SFLP+ H+ + + +Y +++A+
Sbjct: 206 AERLPIDMGKSSSLSFLPVCHVYERML-LYMYQYCGVEIYYAE 247
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ TG+K+ + +A L+ Y Y E +L LI SK ++A+G + S
Sbjct: 284 ELTGIKKKLFFWAIELGLK-YEPYGENGWWYETQLKLANKLIFSKWREALG-GNLKAIAS 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+AP+ L R F + IP+ E +G++E + +V+ + FK+ VG+ + T+ KI
Sbjct: 342 GSAPLQPRLARVFNAGGIPVMEGYGLTETSPVVSVNDMRNHGFKIGTVGKPLRETEVKIA 401
Query: 193 DPDEEGNGEICLK 205
+ +GEI +K
Sbjct: 402 E-----DGEILVK 409
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +D N K + +K++ F P +SI G+L PTMK+KR + ++Y+ + ++ Y
Sbjct: 533 QEEVDHYNEK-FGHWEKVKTFRLTPDVWSIEGGQLTPTMKMKRKIIKEQYKDLYNEIY 589
>gi|18313364|ref|NP_560031.1| ABC transporter ATP-binding protein [Pyrobaculum aerophilum str.
IM2]
gi|18160893|gb|AAL64213.1| ABC transporter ATP-binding component [Pyrobaculum aerophilum str.
IM2]
Length = 681
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 11/222 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY V A L LG R + ++G+N PE ++ A+ GG + G+Y PE
Sbjct: 45 EYYERVSKFAYGLLALGFRRGDHLAVVGYNRPEILIAEQSAMALGGISVGVYPDTLPEER 104
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-------DKPGVISWDE 318
+ L +D + V ED +Q++KIL VK PKL+ I+ ++ + +PG++SW E
Sbjct: 105 AYWLDYTDVKVVVAEDQEQVDKILVVKKDLPKLEYIIYWDERMMWQYKDIKEPGLLSWKE 164
Query: 319 LMELG---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
+ +LG R + + L+ ++ ++ C ++ TSGT G K VML++ ++ A + +
Sbjct: 165 VEKLGEEVRKSDSKLLEELIAKTHPDDVCLILSTSGTTGRPKGVMLTYSSMMSMAKNLWE 224
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
++ +S+LP I Q + + M V + F ++
Sbjct: 225 VDPIQE-NFEYVSYLPFGWIGEQMMSLAMHMLVGFKINFVEE 265
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ + R LI + GL R + + G + + + +++ +L + + ++GM+E +G T
Sbjct: 338 WHISRMLIYRSILDKTGLKRIKYAYVGGSFLGPDYLKFYRALGVNLKRIWGMTEVSGIAT 397
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V ++ +LD VG+ I T+ KI + +GEI ++
Sbjct: 398 VHPDNEVRLDTVGKPIANTEIKIAE-----DGEILVR 429
>gi|409198078|ref|ZP_11226741.1| AMP-dependent synthetase and ligase [Marinilabilia salmonicolor JCM
21150]
Length = 606
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 30/318 (9%)
Query: 188 QTKIVDPDEEGNG-EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGA 246
++ I+ EGN + ++Y N R A L +G ++ + + N PEW + D+G
Sbjct: 19 KSDILVAKREGNWVKFSTEDYVRNARNFAFGLLAMGFKKGDKIATVSNNRPEWNFVDMGM 78
Query: 247 IYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG 306
G +Y T E H L SD+ + +V D +++L + + KLK + +
Sbjct: 79 ALIGVVHVPVYPTMGDEDYRHILSHSDSKMLLVSDLPTYKRLLPIAKKIGKLKKVYTFNH 138
Query: 307 KPDKPGVISWDELMELGRAAP---DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSH 363
D P +W E+ G A E D+ +I ++ T++YTSGT G K VML+H
Sbjct: 139 YEDIP---NWTEVTREGFNAKIKYREQFDKASASIKPDDLLTIIYTSGTTGLPKGVMLTH 195
Query: 364 DNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD------K 417
NI N + + L+ + ++SFLPL H+ + V+ Y A ++++A+ +
Sbjct: 196 KNILSNIEGVENLYPLDESD-RILSFLPLCHVYERMVN-YLFQKKACSIYYAENLGTIAQ 253
Query: 418 NALKV----YKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGE-----------LG 462
N ++ + I+R + +S ++++ F+ + S+ GE G
Sbjct: 254 NMAEIKASAFATVPRVIERIYDRIVSKGEELRGFKRMVFFQSLKLGEKYRVDGKHHFWYG 313
Query: 463 PTMKVKRPFVVKKYQSII 480
+ + R V K+Q I
Sbjct: 314 MRLWIARKLVFSKWQKIF 331
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECA---GAH 167
+ R L+ SK ++ G + +SG A + L R F + IP+ E +GM+E + A+
Sbjct: 318 IARKLVFSKWQKIFG-GNLKFVISGGAALQPRLSRLFFAAGIPLMEGYGMTETSPVIAAN 376
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG----NGEICLKEYEANVRTVAKAFLKLG 222
+S P+ + VG T+ + K DE+G G +K Y +++ + K G
Sbjct: 377 HLSEPNSLLIGTVGPTLKNIEVKT---DEDGEILVKGPSVMKGYYKDIKNTDEVLEKDG 432
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ K Q +++ N KS+ ++I++F + + TGEL PT+K++R + KY ++
Sbjct: 527 KIQKLFQKEVNQYN-KSLGKTEQIKRFRLVCEPWGPATGELSPTLKLRRRVIYNKYAVLL 585
Query: 481 DKFY 484
Y
Sbjct: 586 RDIY 589
>gi|374326636|ref|YP_005084836.1| ABC transporter ATP-binding protein [Pyrobaculum sp. 1860]
gi|356641905|gb|AET32584.1| ABC transporter ATP-binding component [Pyrobaculum sp. 1860]
Length = 641
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 12/223 (5%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY VR A L LG + ++GFN P ++++ A+ G G+Y PE
Sbjct: 46 EYLDKVREFAYGLLALGFRPGEHLAVVGFNRPFLLFAEVAAMALHGKGVGVYPDLLPEER 105
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV--------QYEGKPDKPGVISWD 317
+ L +D+ + V ED +Q++KIL V + PKL+AIV +YE + ++SWD
Sbjct: 106 AYWLDYTDSVVVVAEDQEQVDKILAVARELPKLRAIVYWDDRMMWRYEKRIGDVALLSWD 165
Query: 318 ELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
E++++GR A +++ E+ + ++ C L+ TSGT G K VML++ ++ A +
Sbjct: 166 EVVKMGREAASTEPGLFEKMAESTSPDDVCLLLSTSGTTGKPKAVMLTYSSMLSMAKNLW 225
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ + +S+LP + + Q + + M V L F ++
Sbjct: 226 EVDPIWE-DFEYVSYLPFAWVGEQMMSLAMHMLVGFRLNFVEE 267
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 114 WLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPD 173
WL+ + +GL R R + G + + + ++F + + + ++GM+E +G TV D
Sbjct: 345 WLVYRSLLDKLGLKRIRYAYVGGSFLGPDYLKFFRGIGVNLKRIWGMTEVSGIATVHRND 404
Query: 174 DFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
D +LD VG I T+ KI + +GEI ++
Sbjct: 405 DVRLDTVGAPIANTEIKIAE-----DGEILVR 431
>gi|402875005|ref|XP_003901312.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG1-like [Papio
anubis]
Length = 481
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 137 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 195
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP++ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 196 QALGFAKCQKNFYGAAPMTAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPCNYRLYSSG 255
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 256 KLVPGCRVKLVNQDTEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 305
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 306 TGDAGRLDADGF 317
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
V + +E MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A
Sbjct: 4 VYTMEEFMELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARY 63
Query: 373 IIQYFKLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q + A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 64 GSQAGDIRPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 115
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V+ KY+ IID
Sbjct: 414 VYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLDKYKDIID 473
Query: 482 KFY 484
FY
Sbjct: 474 SFY 476
>gi|395750283|ref|XP_002828561.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Pongo abelii]
Length = 589
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 101/179 (56%), Gaps = 11/179 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ +A++ + + + P +YR+ + L+ SKVK ++GLD C +S
Sbjct: 260 KSTGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFIS 319
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP++ E +FLSLDIPI E++G+SE +G HT+S ++++L G+ + G + +
Sbjct: 320 GTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQ 379
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+++G GEICL R + +L+ E ++ + W +S DLG + + GF
Sbjct: 380 NKDGIGEICLWG-----RHIFMGYLESETETTEAI-----DDEGWLHSGDLGQLDSLGF 428
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+Y + AK+ +KLGLER+H V I+GFN+ EWF + +GAI AGG G+Y TNS E
Sbjct: 83 FNQYYKACQKAAKSLIKLGLERFHGVGILGFNSAEWFITAVGAILAGGLCVGIYATNSAE 142
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKV 291
AC + + + NI +VE+D+QL+KIL +
Sbjct: 143 ACQYVITHAKVNILLVENDQQLQKILSI 170
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 43/63 (68%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
VYKA Q I+ N + ++NAQKIQK+ L DFSI GELGP MK+KR FV +KY+ ID
Sbjct: 526 VYKAIQQGINAVNQEVMNNAQKIQKWVILEKDFSIYGGELGPMMKLKRHFVAQKYKKEID 585
Query: 482 KFY 484
Y
Sbjct: 586 HMY 588
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 365 NITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+IT+ A + + FKL V+S+LPLSHIAAQ +DI+ + + A +FA +ALK
Sbjct: 169 SITWMAGAVAKDFKLTEKHEMVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALK 225
>gi|399051065|ref|ZP_10741035.1| AMP-forming long-chain acyl-CoA synthetase [Brevibacillus sp.
CF112]
gi|398051232|gb|EJL43566.1| AMP-forming long-chain acyl-CoA synthetase [Brevibacillus sp.
CF112]
Length = 640
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 12/228 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ ++ V+ ++ +LG R + IIG N PEW ++ A GG + G+Y +
Sbjct: 33 ELTWRQLSEEVKALSSGLRELGFSRGDKLAIIGDNRPEWVMAEAAAQALGGVSVGLYQDS 92
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISW 316
P+ + L SDA I VVED +Q++K+L++ + P ++ IV Y+ K D P + +
Sbjct: 93 LPKEIAYILNHSDAKIVVVEDQEQVDKLLEIADELPFVQKIVFYKDKGMRGYDHPLLSPF 152
Query: 317 DELMELGRAA---PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
++ +LGR +R +E + + L YT+GT G K MLSH N+ +
Sbjct: 153 RDVQQLGRQCAYYASGEWEREVEQGSVEDIAILCYTAGTTGPPKGAMLSHRNLLHMTESL 212
Query: 374 IQYFKLESAALS--VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNA 419
F ++ +S +SFLPL+ I Q + + T+ F + +
Sbjct: 213 ---FSIDPVDVSDEYVSFLPLAWIGEQMMSVSGAFLAGYTVNFPEDTS 257
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 69 KVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQA 123
+V KLQ G V W Y ++ + Q + V + Y L +L+ S +K
Sbjct: 284 RVQVKLQDAGWLKRSVYEWFRPYGEAKA-QAAITGGRLTVWQRVMYALGDYLVFSAIKDH 342
Query: 124 MGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRT 183
+GL R + + +G A + ++ R+F SL + + +++G +E +G V + D VG
Sbjct: 343 LGLLRIKRAYTGGAALGADVSRFFQSLGVNLKQIYGQTEVSGIAAVHRDGKIRPDTVGEP 402
Query: 184 IPGTQTKIVDPDEEGNGEICLK 205
+PGT+ + D GEI +K
Sbjct: 403 LPGTEINVSD-----KGEIWIK 419
>gi|108804880|ref|YP_644817.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766123|gb|ABG05005.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 592
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E VR A LG+ R V +I N EW +D G +Y T
Sbjct: 42 VSYGELYGMVRDFAAGLAGLGVGRGDRVGLIARNRVEWAVTDFAVQSLGAATVPVYPTLE 101
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
PE H L +A + VVED + L ++ + + P L+ +V EG+ G ++E++
Sbjct: 102 PEQMAHILADCEARVVVVEDGELLGRVSSARGELPALEHVVVMEGE----GATLFEEVLR 157
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
GR P E + ++ + T++YTSGT G K +L+H NI N I
Sbjct: 158 EGRERPLEGWEEGWRSLGREDVATIIYTSGTTGRPKGAVLTHGNILSNLEGI-------Q 210
Query: 382 AALSV------ISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
AL+V +SFLPLSH+ +T + + V A++++A+
Sbjct: 211 DALTVYPEDVFLSFLPLSHVFERTCGQFLALGVGASVYYAE 251
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYR----LVRWLILSKVKQAMGLDRCRVSLS 134
VKRW+ A + + Y L++ R + L+ ++++A+G R R +S
Sbjct: 292 VKRWLFGRAVAAGRRRY-EVLDRGGRPGLPLRAALAVYDRLVFRRLREAVG-GRVRFFVS 349
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G A + TE+ ++F + I I E +G++E + + + + VG + + +I
Sbjct: 350 GGAKLDTEVGKFFYAAGIKIMEGYGLTETSPVIACNRLEKPRFGTVGLPLSNLEVRISPE 409
Query: 195 DE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
E + G ++ Y + R+ +AF + G R
Sbjct: 410 GEIQVRGPSVMRGYFRDERSTEEAFTQDGFFR 441
>gi|433544938|ref|ZP_20501307.1| AMP-dependent synthetase and ligase [Brevibacillus agri BAB-2500]
gi|432183811|gb|ELK41343.1| AMP-dependent synthetase and ligase [Brevibacillus agri BAB-2500]
Length = 640
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 12/228 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ ++ V+ ++ +LG R + IIG N PEW ++ A GG + G+Y +
Sbjct: 33 ELTWRQLSEEVKALSSGLRELGFSRGDKLAIIGDNRPEWVMAEAAAQALGGVSVGLYQDS 92
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISW 316
P+ + L SDA I VVED +Q++K+L++ + P ++ IV Y+ K D P + +
Sbjct: 93 LPKEIAYILNHSDAKIVVVEDQEQVDKLLEIADELPFVQKIVFYKDKGMRGYDHPLLSPF 152
Query: 317 DELMELGRAA---PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
++ +LGR +R +E + + L YT+GT G K MLSH N+ +
Sbjct: 153 RDVQQLGRQCAYYASGEWEREVEQGSVEDIAILCYTAGTTGPPKGAMLSHRNLLHMTESL 212
Query: 374 IQYFKLESAALS--VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNA 419
F ++ +S +SFLPL+ I Q + + T+ F + +
Sbjct: 213 ---FSIDPVDVSDEYVSFLPLAWIGEQMMSVSGAFLAGYTVNFPEDTS 257
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 11/142 (7%)
Query: 69 KVTYKLQTTG-VKR----WIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQA 123
+V KLQ G +KR W Y ++ + Q +A V + Y L +L+ S +K
Sbjct: 284 RVQVKLQDAGWLKRSLYEWFRPYGEAKA-QTAIAGGRLTVWQRLMYTLGDYLVFSAIKDH 342
Query: 124 MGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRT 183
+GL R + + +G A + ++ R+F SL + + +++G +E +G V K D VG
Sbjct: 343 LGLLRIKRAYTGGAALGADVSRFFQSLGVNLKQIYGQTEVSGIAAVHRDGKIKPDTVGEP 402
Query: 184 IPGTQTKIVDPDEEGNGEICLK 205
+PGT+ + D GEI +K
Sbjct: 403 LPGTEINVSD-----KGEIWIK 419
>gi|386361048|ref|YP_006059293.1| AMP-forming long-chain acyl-CoA synthetase [Thermus thermophilus
JL-18]
gi|383510075|gb|AFH39507.1| AMP-forming long-chain acyl-CoA synthetase [Thermus thermophilus
JL-18]
Length = 644
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI +Y NV A L LG + +I N PEW Y++LGA G + G+Y ++
Sbjct: 42 EITYAQYYENVLLFAHGLLSLGFGPGERLAVIADNIPEWLYAELGAQAVRGISVGVYQSS 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISW 316
P + L + A++ + ED +Q++K+ +++++ P+++ ++ + K + P ++S+
Sbjct: 102 LPPEIAYMLQYTGASVVLAEDQEQVDKLYEIRSEIPQVRYVIYEDEKGMRGYKDPWLLSF 161
Query: 317 DELMELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
E++E G R PD +++R+L + E C L TSGT G K ML H N+
Sbjct: 162 AEVLERGREHRRKHPD-AVERLLLEASPEEVCHLSSTSGTTGRPKAAMLRHRNLIHMGVA 220
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
+ + L +SFLPL+ I Q + + +T
Sbjct: 221 LQEVDPLLPTD-DYLSFLPLAWIGEQMMSVAMALT 254
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 106 PYTYRLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P RL WL + ++ +G R R + +G A + ++ R+F ++ + + +++G +
Sbjct: 330 PLGLRLAYWLADQVLFKPLRDQLGFLRLRRAYTGGAALGPDVFRFFHAIGVNLKQIYGQT 389
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
E G V D + D VG IPGT+ +I + GEI L+
Sbjct: 390 EIIGIAFVHRDGDVRHDTVGLPIPGTEVRISE-----AGEILLR 428
>gi|443244948|ref|YP_007378173.1| long-chain-fatty-acid--CoA ligase (Synthetase) [Nonlabens
dokdonensis DSW-6]
gi|442802347|gb|AGC78152.1| long-chain-fatty-acid--CoA ligase (Synthetase) [Nonlabens
dokdonensis DSW-6]
Length = 592
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 6/214 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
K + V++ L+LG+++ + II N EW D+G + G +Y T S E
Sbjct: 37 KSFVDQANAVSRGLLRLGVQKNDKIAIISTTNRTEWNIMDIGIMQTGAQDVPIYPTISEE 96
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S++ V D + +K++ +K Q LK + + D G SW+++ ELG
Sbjct: 97 DYAYVLNHSESKYVFVSDQEVYDKVMSIKDQVASLKEVYSFN---DIAGCRSWNDVKELG 153
Query: 324 RAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+ A + E L++++ +I + TL+YTSGT G K VMLSH NI NA +
Sbjct: 154 KDASNQEELEKIMASIDVEDLATLIYTSGTTGRPKGVMLSHKNIASNAMTCELRLPIVKG 213
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ HI + + V T ++FA+
Sbjct: 214 KSKALSFLPVCHIYERMLQYLYVYT-GTGIYFAE 246
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L + LI SK ++A+G + ++ SG+A + L R F + +P+ E +G++E + +V+
Sbjct: 318 LAKKLIFSKWQEALGGNLLAIA-SGSAALQPRLARVFNAAGVPVMEGYGLTETSPVISVN 376
Query: 171 APDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
D F++ VG+ I T +I + +GEI +
Sbjct: 377 DMRDGGFRIGTVGKLIANTDVQIAE-----DGEIII 407
>gi|291294538|ref|YP_003505936.1| AMP-dependent synthetase and ligase [Meiothermus ruber DSM 1279]
gi|290469497|gb|ADD26916.1| AMP-dependent synthetase and ligase [Meiothermus ruber DSM 1279]
Length = 646
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI +Y +V A L LG E+ + +I N PEW Y++L GG + G+Y ++
Sbjct: 40 EITFADYYRHVTRFAAGLLALGFEKGERLAVIADNIPEWLYAELATQALGGISVGVYQSS 99
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-----PDKPGVIS 315
P + L + A V ED +Q++K+L+++++ P ++ ++ + K D P +I
Sbjct: 100 LPPEIAYVLSYTGAAFVVAEDQEQVDKLLEIRSEIPSVRKVIYEDPKGMRAYRDDPWIIG 159
Query: 316 WDELMELGRAAPDESLDRVLETIATN---ECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+DE+ LG + V E IA + C L TSGT G K ML H N+
Sbjct: 160 FDEVERLGEEYLQKHPQAVEERIAQGHPEDVCHLSLTSGTTGRPKAAMLRHRNLLHMGVA 219
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDI 402
+ + L+ +SFLP + I Q + +
Sbjct: 220 LQEIDPLKPTD-DYLSFLPFAWIGEQMMSV 248
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 67 WKKVTYKLQTTGVKRWIANYAKSTSLQHYMA-YLEKNVSEPYTYRLVRW----LILSKVK 121
W +++ +T RW+ Y + + + A Y + P RL W ++ ++
Sbjct: 294 WVRIS---ETYAFNRWV--YQQMLKIGYRAADYRMRGRPMPLGLRLAYWFADQIMFKPLR 348
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+G R R + +G A + ++ R++ ++ + + +++G +E G V D + D VG
Sbjct: 349 DQLGFLRLRRAYTGGAALGPDVFRFYHAIGVNLKQIYGQTEIIGIAFVHRDGDVRADTVG 408
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK----------EYEANVRTVAKAFLKLG 222
IPG + KI + GEI + EA T A +L G
Sbjct: 409 LPIPGGEVKISE-----RGEILCRSDAVVAGYWQNPEATAETFADGWLHTG 454
>gi|257056481|ref|YP_003134313.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
viridis DSM 43017]
gi|256586353|gb|ACU97486.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
viridis DSM 43017]
Length = 599
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I +E+ A V +VAK +K G+E V ++ EW D AGG +Y T+
Sbjct: 46 DITAREFAAQVLSVAKGLVKAGIEPGDRVALMSKTRYEWTLIDFAIWAAGGVTVPIYETS 105
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A +VE I ++ + P L + Q EG DKP V D+L
Sbjct: 106 SAEQAHWVLADSGAKAVIVETADHFATISSIRDRLPGLNHLWQIEG--DKPAV---DQLS 160
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
ELG D+ + + + T+VYTSGT G K V+L+H N+ I+ F KL
Sbjct: 161 ELGADVADDEVHTRRRAVKATDIATIVYTSGTTGRPKGVVLTHRNLLAEVRADIKAFPKL 220
Query: 380 ESAALSVISFLPLSHIAAQTV 400
S++ FLPL+HI A+ +
Sbjct: 221 MEPGNSLLLFLPLAHILARAI 241
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ +K++ A+G RC ++SG AP+ L +F + +P+ E +G++E A V+ +
Sbjct: 333 LVYTKLRAALG-GRCIAAVSGGAPLGERLAHFFRGIGVPVFEGYGLTETTAAANVNTEEA 391
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
FK+ VGR + GT +I + +GE+ LK
Sbjct: 392 FKVGTVGRPVAGTSVRIAE-----DGEVLLK 417
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A QAA+D AN K +S A+ I+KF LP DF+ GE+ P++K+KR V K Y I++ Y
Sbjct: 539 AVQAAVDEAN-KQVSQAESIRKFIILPKDFTEAGGEVTPSLKLKRNVVSKNYADAIERLY 597
>gi|403377473|gb|EJY88734.1| Long-chain-fatty-acid--CoA ligase ACSBG2 [Oxytricha trifallax]
Length = 793
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+++ +KR + +AK Q+ +A E N P+ Y L + +IL+K+KQ +G DR
Sbjct: 460 ESSPMKRSLFKWAKEKGYQNLLARKE-NEPSPFGYNLSKLMILNKIKQQLGFDRIDKLYY 518
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK---LDGVGRTIPGTQTKI 191
GAAP+S ++K++F SL++P+ V+G+SE + A T + + + L+ GR PGTQ KI
Sbjct: 519 GAAPLSFKVKKFFASLNMPLINVYGLSESSAATTYTDDPNQREQGLNKAGRAFPGTQIKI 578
Query: 192 VDPDEEGNGEICLK 205
+PDE G GEICL+
Sbjct: 579 FNPDEIGMGEICLR 592
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 22/263 (8%)
Query: 180 VGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEW 239
VG + GT + + N + ++ AKA +LG++ V ++G+N+PE
Sbjct: 161 VGISSAGTDSNATTQVQYINVQYTWDQFFDKAMLFAKALHQLGIKEKQCVSLMGYNSPEH 220
Query: 240 FYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQL-EKILKVKAQCPKL 298
F + +G A +Y TN PE+C +V S + I + + + EK L K + +L
Sbjct: 221 FIALMGTYMANCITTEIYLTNGPESCYKQIVHSKSKIIICDTLQTYKEKFLPFKNEYFQL 280
Query: 299 --KAIVQY---------EGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLV 347
K ++ + + K + +W + + +G ++ + R L +CC LV
Sbjct: 281 GIKQVIMFGELTGERSHQRKRKDIRLYNWAQALNIGENIENQVIFRRLRDQQPGQCCNLV 340
Query: 348 YTSGTEGASKPVMLSHDNITFNAACIIQYFKL--------ESAALSVISFLPLSHIAAQT 399
YTSGT G SK VMLSHDN+T+ + + L ++ + +S+LPLSHI AQ
Sbjct: 341 YTSGTTGDSKGVMLSHDNMTWYWSVQNKLLALRNVNGQDYKTQTIHQVSYLPLSHITAQM 400
Query: 400 VDIYSVM--TVAATLWFADKNAL 420
D + + FA +AL
Sbjct: 401 SDFMRTICSNQPVMMTFAQPDAL 423
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +D+ N K++S +I+K+ + DFSI GEL PTMK+KR ++VKK+ +I++ Y
Sbjct: 731 QKCVDQVNNKAVSRVSQIKKWRIIDQDFSIDGGELTPTMKIKRKYIVKKFHDVIEQLY 788
>gi|94969108|ref|YP_591156.1| AMP-dependent synthetase/ligase [Candidatus Koribacter versatilis
Ellin345]
gi|94551158|gb|ABF41082.1| AMP-dependent synthetase and ligase [Candidatus Koribacter
versatilis Ellin345]
Length = 598
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 212 RTVAKA-FLKL-GLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
R VA A +L+L G+++ V I+ N PEW +D + G +Y T +PE + L
Sbjct: 43 RVVATARWLQLQGVKKGDRVAILSENRPEWAIADFAVLAIGAVVVPIYATLTPEHISYLL 102
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDE 329
S + + QL+K+ ++AQ P ++ E P P I + E G D
Sbjct: 103 KDSGTRVIFLSTRTQLQKVRAIEAQTPLQHVVMMDEVIP--PEAIWMQTITESGTEGRDA 160
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAALSVIS 388
D +++ +++ TLVYTSGT G SK +++H N+ N +C ++ F L +IS
Sbjct: 161 GFDATAKSLQSDDLATLVYTSGTTGNSKGAIITHGNMAANLSCSLEGFAALREGGHRLIS 220
Query: 389 FLPLSHIAAQTVD 401
FLPLSHI A+ +D
Sbjct: 221 FLPLSHITARHLD 233
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+K+ I ++A +H L N ++L L+ SKV++AMG + +SG A
Sbjct: 285 GIKKKIYDWAMRVGAKHQATILVGNTPTSLDWKLANKLLFSKVREAMG-GEVQFFISGGA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEE 197
P+ EL ++ S I I E +G++E + ++ P + +L VG + + KI
Sbjct: 344 PLGRELAEWYASFGIRIHEGYGLTETSPVIALNNPKNHRLGTVGPLLSNVEVKIAS---- 399
Query: 198 GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+GEI ++ +V K + + E + F EWF + D+G + GF
Sbjct: 400 -DGEILVRG-----PSVFKGYWNMPTETTQA-----FEG-EWFKTGDIGHLDGEGF 443
>gi|46198387|ref|YP_004054.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
gi|46196009|gb|AAS80427.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
Length = 644
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 10/225 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI +Y NV A L LG + +I N PEW Y++LGA G + G+Y ++
Sbjct: 42 EITYAQYYENVLLFAHGLLSLGFGPGERLAVIADNIPEWLYAELGAQAVRGISVGVYQSS 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISW 316
P + L + A++ + ED +Q++K+ +++++ P ++ ++ + K + P ++S+
Sbjct: 102 LPPEIAYMLQYTGASVVLAEDQEQVDKLYEIRSEIPHVRYVIYEDEKGMRGYKDPWLLSF 161
Query: 317 DELMELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
E++E G R PD +++R+L + E C L TSGT G K ML H N+
Sbjct: 162 AEVLERGREHRRKHPD-AVERLLLEASPEEVCHLSSTSGTTGRPKAAMLRHRNLIHMGVA 220
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ + L +SFLPL+ I Q + + +T + F ++
Sbjct: 221 LQEVDPLLPTD-DYLSFLPLAWIGEQMMSVAMALTGGFAVNFPEE 264
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 106 PYTYRLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P RL WL + ++ +G R R + +G A + ++ R+F ++ + + +V+G +
Sbjct: 330 PLGLRLAYWLADQVLFKPLRDQLGFLRLRRAYTGGAALGPDVFRFFHAIGVNLKQVYGQT 389
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
E G V D + D VG IPGT+ +I + GEI L+
Sbjct: 390 EIIGIAFVHRDGDVRHDTVGLPIPGTEVRISE-----AGEILLR 428
>gi|55980417|ref|YP_143714.1| long-chain fatty acid--CoA ligase [Thermus thermophilus HB8]
gi|55771830|dbj|BAD70271.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus HB8]
Length = 644
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 10/215 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI +Y NV A L LG + +I N PEW Y++LGA G + G+Y ++
Sbjct: 42 EITYAQYYENVLLFAHGLLSLGFGPGERLAVIADNIPEWLYAELGAQAVRGISVGVYQSS 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISW 316
P + L + A++ + ED +Q++K+ +++++ P ++ ++ + K + P ++S+
Sbjct: 102 LPPEIAYMLQYTGASVVLAEDQEQVDKLYEIRSEIPHVRYVIYEDEKGMRGYKDPWLLSF 161
Query: 317 DELMELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
E++E G R PD +++R+L + E C L TSGT G K ML H N+
Sbjct: 162 AEVLERGREHRRKHPD-AVERLLLEASPEEVCHLSSTSGTTGRPKAAMLRHRNLIHMGVA 220
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
+ + L +SFLPL+ I Q + + +T
Sbjct: 221 LQEVDPLLPTD-DYLSFLPLAWIGEQMMSVAMALT 254
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 106 PYTYRLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P RL W + ++ +G R R + +G A + ++ R+F ++ + + +V+G +
Sbjct: 330 PLGLRLAYWFADQVLFKPLRDQLGFLRLRRAYTGGAALGPDVFRFFHAIGVNLKQVYGQT 389
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
E G V D + D VG IPGT+ +I + GEI L+
Sbjct: 390 EIIGIAFVHRDGDVRHDTVGLPIPGTEVRISE-----AGEILLR 428
>gi|239905546|ref|YP_002952285.1| fatty-acid--CoA ligase [Desulfovibrio magneticus RS-1]
gi|239795410|dbj|BAH74399.1| putative fatty-acid--CoA ligase [Desulfovibrio magneticus RS-1]
Length = 635
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 10/215 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y A A K GL R + +IG N PEW +++L GG A G+Y E
Sbjct: 46 DYLAAAAEFAGGLKKYGLGRGDIIILIGDNRPEWLFAELAIQALGGIALGLYQDAPAEEI 105
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELME 321
H S+A + V ED +Q++KIL ++ + P L IV ++ K D+PG++S++ + E
Sbjct: 106 AHIFQLSEARLVVAEDQEQVDKILGIRPELPHLAHIVYHDPKGLAGLDEPGLVSFEAVRE 165
Query: 322 LGR--AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
LGR A E+ R L + ++ C + TSGT G K +LSH N+ A +
Sbjct: 166 LGRDQAGQFEAWTREL---SPDDPCLIATTSGTTGRPKLALLSHKNL-LAMAHNLGLVDA 221
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWF 414
+ ISFLPL+ + Q + S + T+ F
Sbjct: 222 KRETDEFISFLPLAWMGEQMMAAASALLFGFTVNF 256
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 108 TYRLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSEC 163
T RL +L + +K +G R + +G A + + R+F ++ + + +++G +E
Sbjct: 327 TLRLAYFLAWACLFRALKDRLGFSNVRSASTGGAALGPDAFRFFHAMGVNLKQIYGQTEI 386
Query: 164 AGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
AG + VG+ IP T+ I +GEI K
Sbjct: 387 AGISCIHRDGAVDFTSVGQPIPDTELTIA-----ADGEILSK 423
>gi|384430644|ref|YP_005640004.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
gi|333966112|gb|AEG32877.1| Long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
Length = 644
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 114/225 (50%), Gaps = 10/225 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI +Y NV A L LG + + +I N PEW Y++LGA G + G+Y ++
Sbjct: 42 EITYAQYYENVLLFAHGLLSLGFQPGERLAVIADNIPEWLYAELGAQAVRGISVGVYQSS 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISW 316
P + L + A++ + ED +Q++K+ +++++ P ++ ++ + K + P ++S+
Sbjct: 102 LPPEIAYMLQYTGASVVLAEDQEQVDKLYEIRSEIPHVRYVIYEDEKGMRGYKDPWLLSF 161
Query: 317 DELMELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
E++E G R PD +++++L + E C L TSGT G K ML H N+
Sbjct: 162 AEVLERGREHRRKHPD-AVEKLLLEASPEEVCHLSSTSGTTGRPKAAMLRHRNLIHMGVA 220
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ + L +SFLPL+ I Q + + +T + F ++
Sbjct: 221 LQEVDPLLPTD-DYLSFLPLAWIGEQMMSVAMALTGGFAVNFPEE 264
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 106 PYTYRLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P RL WL + ++ +G R R + +G A + ++ R+F ++ + + +++G +
Sbjct: 330 PLGLRLAYWLADQVLFKPLRDQLGFLRLRRAYTGGAALGPDVFRFFHAIGVNLKQIYGQT 389
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
E G V D + D VG IPGT+ +I + GEI L+
Sbjct: 390 EIIGIAFVHRDGDVRHDTVGLPIPGTEVRISE-----AGEILLR 428
>gi|374852348|dbj|BAL55283.1| hypothetical conserved protein [uncultured Bacteroidetes bacterium]
Length = 601
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
+++AFLKLGL++ + ++ N PEW + DLGAI G MY + P + L S+
Sbjct: 45 LSRAFLKLGLKKGDRIALVANNRPEWNFVDLGAIQIGLVVVPMYANSIPADYEYILNHSE 104
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDR 333
+ I +K+ + CP L+ + ++ +PD SW+E + LG+ D++ D
Sbjct: 105 SRILFCAGGDIWQKVRSILPHCPNLEKVYVFDPEPD---ATSWEEFLALGK---DDTTDL 158
Query: 334 --VLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL----ESAALSVI 387
E + + T +YTSGT G K V+L+H NI N + + E L +
Sbjct: 159 RPYKEAVQPEDWATFLYTSGTTGTPKGVILTHHNIVSNVLTVRSLNLIPRSPEGQRLRAL 218
Query: 388 SFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
SFLPL+H + V Y+ + + +++A+
Sbjct: 219 SFLPLNHSFERMV-FYTYLAMGIGVYYAE 246
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 36/169 (21%)
Query: 106 PYTYRL----VRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P YRL R L+ K K+A+G + ++GAA + L R F IPI E +G++
Sbjct: 309 PLGYRLQLGLARTLVFKKWKEALG-GNVSLIVTGAAALPQHLARIFWGAGIPIMEGYGLT 367
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE---EGNGEICLK------EYEANVR 212
E + +V+ D +L VGR IPG + +I +P E EG GEI ++ Y N
Sbjct: 368 ETSPVISVNTFDAHRLGSVGRPIPGVEVRI-EPLEGYTEGEGEIVVRGPNVMVGYYKNPE 426
Query: 213 TVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTN 260
A+ LK G WFY+ D+G + GF +Y T+
Sbjct: 427 ATAEV-LKEG----------------WFYTGDVGKLDKDGF---LYITD 455
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + QA +DR N + S ++ +KF L +++I GEL PT+K+KR ++ +Y+ I
Sbjct: 530 RVVELIQAEVDRINAQ-FSQYERPKKFILLTKEWTIEGGELTPTLKLKRRVILSQYKDAI 588
Query: 481 DKFY 484
+ Y
Sbjct: 589 EALY 592
>gi|221039866|dbj|BAH11696.1| unnamed protein product [Homo sapiens]
Length = 482
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S +L+ + ++ +P+T RL +L+L+KV+
Sbjct: 137 WEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDL-KPFTTRLADYLVLAKVR 195
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G +C+ + GAAP+ E + +FL L+I + +G+SE +G H +S+P +++L G
Sbjct: 196 QALGFAKCQKNFYGAAPMMAETQHFFLGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSG 255
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+ +PG + K+V+ D EG GEICL RT+ +L + + ++ + W +
Sbjct: 256 KLVPGCRVKLVNQDAEGIGEICLWG-----RTIFMGYLNMEDKTCEAI-----DEEGWLH 305
Query: 242 S-DLGAIYAGGF 252
+ D G + A GF
Sbjct: 306 TGDAGRLDADGF 317
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
V + +E MELG P+E+LD +++T N+CC LVYTSGT G K VMLS DNIT+ A
Sbjct: 4 VYTMEEFMELGNEVPEEALDAIIDTQQPNQCCVLVYTSGTTGNPKGVMLSQDNITWTARY 63
Query: 373 IIQYFKLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q + A + V+S+LPLSHIAAQ D+++ + A + FA+ +ALK
Sbjct: 64 GSQAGDIRPAEVQQEVVVSYLPLSHIAAQIYDLWTGIQWGAQVCFAEPDALK 115
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
+K VY+A + I R N+ + + IQK+ L DFSI GELGPTMK+KR V++K
Sbjct: 409 EKKDEAVYQAIEEGIRRVNMNAAARPYHIQKWAILERDFSISGGELGPTMKLKRLTVLEK 468
Query: 476 YQSIIDKFY 484
Y+ IID FY
Sbjct: 469 YKGIIDSFY 477
>gi|414167882|ref|ZP_11424086.1| hypothetical protein HMPREF9696_01941 [Afipia clevelandensis ATCC
49720]
gi|410887925|gb|EKS35729.1| hypothetical protein HMPREF9696_01941 [Afipia clevelandensis ATCC
49720]
Length = 612
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+++ + +A A G II PEW ++D+G + AGG ++G+Y T+S
Sbjct: 44 RQWLQTAKEIAYALDASGFRPGDVASIIANATPEWVFADIGVLCAGGVSSGIYPTDSASQ 103
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDEL 319
+ + S + EDD+QL+KIL +A+CP L+ IV ++ G D P V+S DE
Sbjct: 104 VEYLINDSRTKVIFAEDDEQLDKILACRARCPTLEKIVVFDMEGLSGFSD-PMVMSLDEF 162
Query: 320 MELGR--AAPDESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
M LGR E+L ++++E+ N+ LVYTSGT G K M S+ ++ +
Sbjct: 163 MALGRNHMQGREALWNQMIESRGPNDLAILVYTSGTTGPPKGAMHSNRSVVHQMR-YADH 221
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ + + FLPL H+A + Y + V + + FA+
Sbjct: 222 LLVPTDHEERLVFLPLCHVAERIGGYYLSIAVGSIMNFAE 261
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
Query: 67 WKK----VTYKLQ-TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLV----RWLIL 117
W+K +T L+ T ++W+ +A + Q Y + + P RL WL+
Sbjct: 285 WEKFYSAITIALKDATPFQQWMYRHALAIG-QRLTDYRLEGETPPLHLRLAGQAAYWLVF 343
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
+++ +GLDR R++ +GAAPIS +L R++L++ + + EV+G +E G T+ + KL
Sbjct: 344 RNIRRMLGLDRVRIAFTGAAPISPDLIRWYLAIGLDMREVYGQTENCGVATLMPNERIKL 403
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
VG+ P + I GEI +K
Sbjct: 404 GSVGKAAPWGEVMICP-----KGEILIK 426
>gi|354616508|ref|ZP_09034128.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
gi|353219141|gb|EHB83760.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
Length = 598
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V VAK + G+E+ V ++ EW D AGG +Y T+
Sbjct: 45 DVTAAEFAAQVLAVAKGLMAAGIEQGDRVGLMSKTRYEWTLIDFAIWAAGGVTVPIYDTS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE + E + V+ + P+L + Q EG D+P V DEL
Sbjct: 105 SAEQAHWILTDSGARAVVVETAEHAETVGSVRERLPELDNLWQIEG--DRPAV---DELS 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
LG D+ + ++ + T+VYTSGT G K V+L+H N+ I+ F +L
Sbjct: 160 ALGSEVADDDVHTRRRSVGAQDVATIVYTSGTTGRPKGVVLTHHNLLAEVRADIKAFPQL 219
Query: 380 ESAALSVISFLPLSHIAAQTV 400
A S + FLPL+HI A+ +
Sbjct: 220 MDAGNSQLLFLPLAHILARAI 240
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ +K++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+ D+
Sbjct: 332 LVYTKLRAALG-GRCIAAVSGGAPLGGRLAHFFRGIGVPVFEGYGLTETSAAANVNTRDE 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
F++ VG+ + GT +I + +GE+ LK
Sbjct: 391 FRVGTVGKPVAGTSVRIAE-----DGEVLLK 416
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QAA+D AN +SNA+ I+KF LP DF+ GE+ P+MK+KR V K Y I++ Y
Sbjct: 540 QAAVDEAN-TFVSNAEAIKKFAVLPHDFTEAGGEITPSMKLKRNVVGKNYAEAIEQLY 596
>gi|297565969|ref|YP_003684941.1| AMP-dependent synthetase and ligase [Meiothermus silvanus DSM 9946]
gi|296850418|gb|ADH63433.1| AMP-dependent synthetase and ligase [Meiothermus silvanus DSM 9946]
Length = 651
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI EY V A L LG + + II N PEW Y++LG GG + G+Y ++
Sbjct: 41 EITYAEYYQKVVGFAHGLLALGFQPGERLAIIADNIPEWLYAELGTQAIGGISVGVYQSS 100
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK-----PGVIS 315
P + L + A + + ED +Q++K+L+++++ P ++ ++ + K + P +I
Sbjct: 101 LPAEIAYVLDYTGAALVLAEDQEQVDKLLEIRSEIPGVRKVIYEDPKGMRAYAGDPWIIG 160
Query: 316 WDELMELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
+ E++ LG RA P +++ ++E + C L TSGT G K ML H N+
Sbjct: 161 FTEVLRLGEEHARANPG-AVETLIEKGKPEDVCHLSLTSGTTGRPKAAMLMHKNLIHMGV 219
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDI 402
+ Q L+ +SFLPL+ I Q + +
Sbjct: 220 ALQQVDPLKPTD-DYLSFLPLAWIGEQMMSV 249
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 67 WKKVTYKLQTTGVKRWIANYAKSTSLQHYMA-YLEKNVSEPYTYRLVRWL----ILSKVK 121
W +++ +T RW+ Y + + + A Y + + P RL L + ++
Sbjct: 295 WVRIS---ETYAFNRWV--YRRLLEVGYRAAEYRMRGQAMPLGLRLAYGLADQVLFKPLR 349
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+G R R + +G A + ++ R++ ++ + + +++G +E G V D + D VG
Sbjct: 350 DQLGFLRLRRAYTGGAALGPDVFRFYHAIGVNLKQIYGQTEIIGIAFVHRDGDVRADTVG 409
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK----------EYEANVRTVAKAFLKLG 222
+ +PG + KI + NGEI + + EA T A +L G
Sbjct: 410 KPLPGGEVKIAE-----NGEILARSDAVVAGYWEKPEATAETFADGWLHTG 455
>gi|338975505|ref|ZP_08630856.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231249|gb|EGP06388.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 606
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+++ + +A A G II PEW ++D+G + AGG ++G+Y T+S
Sbjct: 38 RQWLQTAKEIAYALDASGFRPGDVASIIANATPEWVFADIGVLCAGGVSSGIYPTDSASQ 97
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDEL 319
+ + S + EDD+QL+KIL +A+CP L+ IV ++ G D P V+S DE
Sbjct: 98 VEYLINDSRTKVIFAEDDEQLDKILACRARCPTLEKIVVFDMEGLSGFSD-PMVMSLDEF 156
Query: 320 MELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
M LGR + ++++E+ N+ LVYTSGT G K M S+ ++ +
Sbjct: 157 MALGRNHMQGREALWNQMIESRGPNDLAILVYTSGTTGPPKGAMHSNRSVVHQMR-YADH 215
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ + + FLPL H+A + Y + V + + FA+
Sbjct: 216 LLVPTDHEERLVFLPLCHVAERIGGYYLSIAVGSIMNFAE 255
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
Query: 67 WKK----VTYKLQ-TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLV----RWLIL 117
W+K +T L+ T ++W+ +A + Q Y + + P RL WL+
Sbjct: 279 WEKFYSAITIALKDATPFQQWMYRHALAIG-QRLTDYRLEGETPPLYLRLAGQAAYWLVF 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
+++ +GLDR R++ +GAAPIS +L R++L++ + + EV+G +E G T+ + KL
Sbjct: 338 RNIRRMLGLDRVRIAFTGAAPISPDLIRWYLAIGLDMREVYGQTENCGVATLMPNERIKL 397
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
VG+ P + I GEI +K
Sbjct: 398 GSVGKAAPWGEVMICP-----KGEILIK 420
>gi|315223493|ref|ZP_07865349.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|420160444|ref|ZP_14667227.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314946528|gb|EFS98520.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|394760638|gb|EJF43152.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 599
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 222 GLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVED 281
G++ +V I+ N P+W +DL + +YTTN+ E L+ + ++ + V D
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAEQALYVMNHAEVKVLFVGD 116
Query: 282 DKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAP-DESLDRVLET 337
+KQ +K L+V +QCP L+ IV + + +K I W++ + LG + D LD+ +
Sbjct: 117 EKQYQKALEVASQCPTLQMIVVCDNEVPLTEKQYSIHWNDFLALGNSPQYDTELDKRIAE 176
Query: 338 IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAA 397
++ T++YTSGT G K VML+++N+ F + + ++FLPLSH+
Sbjct: 177 RNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFE 236
Query: 398 QTVDIYSVMTVAATLWFADKNALK 421
+ + + + D N ++
Sbjct: 237 RAWTYFCLYKAVTVYYLDDTNLVR 260
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y ++ K+K+A+G R + G A + + R+F S+ I + +GM+E +
Sbjct: 328 YNFFDKMVYKKLKEALG-GRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATIS 386
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
D VG +P Q +I + +E G + +K Y N AKAF G R
Sbjct: 387 CWGDDRINPQSVGNVMPNVQVRIGEENEILVKGGMVMKGYYKNPEETAKAFTPDGYLR 444
>gi|148263653|ref|YP_001230359.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
gi|146397153|gb|ABQ25786.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
Length = 603
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 13/239 (5%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E+ A+ K ++ V I+ N W +D+G + GG +Y TN+PE
Sbjct: 41 EFYERALMAARGLKKCNVKPGERVAILSENRAGWVIADMGILTVGGVTVPIYPTNTPEQI 100
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPGVISWDELMEL 322
+ L S+A I V Q K+L+++ PK++ +V +E G+P+ P V ++ +L E+
Sbjct: 101 EYVLNHSEARIVFVSSKFQYSKLLRIRETIPKVELVVSFERFLGEPELP-VCTFYQLSEI 159
Query: 323 GRAAPD---ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+ + L+ ++ I + TL+YTSGT G K V L+H NI F+A + +
Sbjct: 160 DLPVTESEKKQLEAGIDCIGPTDLLTLIYTSGTTGVPKGVPLTHRNILFDAFYTSRKAVV 219
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNALKVYKATQAAIDR 432
+SFLPLSH+ +T+ Y ++ + + FAD +N ++V ++ R
Sbjct: 220 LRECEVHLSFLPLSHVLERTIGYYMMIMNGSMMAFADSIEKVPENMMEVKPTVMVSVPR 278
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMA-YLEKNVSE--PYTYRLVRWLILSKVKQAMGLDRCRV 131
Q + VKR + ++A ++ A Y+EK S + Y + L+ K+++ G R+
Sbjct: 293 QMSVVKRKLFHWAIEVGKKYVEARYIEKRTSPLLAFKYNVADRLVFGKLRERFG-GNMRL 351
Query: 132 SLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKI 191
SG AP+ + +F + +PI E +G++E + A + + D + VG + T+ K
Sbjct: 352 FCSGGAPLDKTINEFFWIIGLPILEGYGLTETSPAVSFNNFDQVRFGSVGTALEHTEIKT 411
Query: 192 VDPDEEGNGEICLK 205
+ +GE+ ++
Sbjct: 412 AE-----DGELLIR 420
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ I+KF LP DFSI GEL PT+K++R + +KY+ I+ Y
Sbjct: 556 ESIKKFVLLPRDFSIDGGELTPTLKLRRKVIYEKYKDKIEGMY 598
>gi|150025768|ref|YP_001296594.1| long-chain-fatty-acid--CoA ligase [Flavobacterium psychrophilum
JIP02/86]
gi|149772309|emb|CAL43787.1| Long-chain-fatty-acid--CoA ligase [Flavobacterium psychrophilum
JIP02/86]
Length = 590
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 6/214 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNA-PEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY T+++A L+LG+++ + +I N EW D+G + G +Y T S +
Sbjct: 38 QEYINKANTISRALLRLGIQKNDKIALISTNNRTEWNIMDIGILQTGAQNVPIYPTISED 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L +A C + D + L KI +K P LK I + D G +W+EL+ LG
Sbjct: 98 DYQYILNHCEAKYCFISDAEVLRKINMIKNNVPTLKEIFSFN---DIEGCKNWNELLTLG 154
Query: 324 RAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+++ ++ + + T + T++YTSGT G K VMLSH NI NA E
Sbjct: 155 SDKSNQNEVEERKKAVLTTDLATIIYTSGTTGKPKGVMLSHQNIVSNALDSSNRIPFEEG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ HI + + +Y ++F +
Sbjct: 215 TSKGLSFLPICHIFERMI-LYLYQYYGVAIYFGE 247
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + Q ++ N K N +KI++FE P ++I G L PT+K+KR +++KYQ +
Sbjct: 527 KVIERIQQEVNSLNEK-FGNWEKIKRFELTPDLWTITDGHLTPTLKLKRKIILEKYQKLY 585
Query: 481 DKFYD 485
+K Y+
Sbjct: 586 EKIYN 590
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ TG+K+ + +A L+ Y Y ++ R LI SK K+ +G + +S
Sbjct: 284 ELTGIKKNLFFWAIDLGLR-YEPYGANGFWYEIQLKIARKLIFSKWKEGLG-GNLDLMVS 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+A + L R F + IP+ E +G++E + +V+ + FK+ VG+ I KI
Sbjct: 342 GSAALQPRLTRIFAAAGIPVMEGYGLTETSPVISVNDMRNKGFKIGTVGKVIDKLDVKI- 400
Query: 193 DPDEEGNGEICLK 205
PD GEI K
Sbjct: 401 GPD----GEILCK 409
>gi|336322685|ref|YP_004602652.1| long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
gi|336106266|gb|AEI14084.1| Long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
Length = 619
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 108/208 (51%), Gaps = 7/208 (3%)
Query: 215 AKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDA 274
A+ LKLG+ + V I+ N W +DLG + G +Y TN+ + + + S A
Sbjct: 50 ARGLLKLGIGKGEKVAILSENRAGWVIADLGILSVGAITVPVYATNTADQTAYVINHSGA 109
Query: 275 NICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPGVISWDELMELGRAAPDES- 330
I V + Q +K+L V+ + P ++ ++ +E G P V + +L E+ ++
Sbjct: 110 KIVFVSNKIQYDKLLSVREKIPHVETVISFERFLGDKILP-VYTLFQLSEISMPITEKEK 168
Query: 331 --LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVIS 388
++ ++ + ++ T++YTSGT G K VML+H+NI ++A I+ K + +++S
Sbjct: 169 TEIESGIDEVDKDDILTIIYTSGTTGVPKGVMLTHENIVYDAQYGIEKVKSLTNEETLLS 228
Query: 389 FLPLSHIAAQTVDIYSVMTVAATLWFAD 416
FLPLSH +TV Y + L FA+
Sbjct: 229 FLPLSHALERTVGYYITLMNGCELAFAE 256
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 98 YLEKNVSEPYT--YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPIC 155
Y+ K++ E YR L+ K++Q G R + +SG AP+ + +F + IPI
Sbjct: 317 YITKDLPESLKVKYRFYDKLVFRKIRQRFG-GRMKFFVSGGAPLDKTINEFFWVIGIPIL 375
Query: 156 EVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
E +G++E + A +++ DD K VG T+ K+ +GE+ +K
Sbjct: 376 EGYGLTETSPAISINTLDDVKFGSVGTAFEYTEFKVAQ-----DGELMVK 420
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 414 FADKNALKVYKATQ-------AAIDRANLKSISNA----QKIQKFEFLPADFSIPTGELG 462
FA +N LK + + R+ ++ I++ + I+KF +P DFS+ GEL
Sbjct: 519 FARENKLKFFDVGDLVKNEKVTELFRSRIEEINSNLPKYETIKKFSIVPRDFSVAGGELT 578
Query: 463 PTMKVKRPFVVKKYQSIIDKFY 484
PT+K+KR + KY+ +I+ Y
Sbjct: 579 PTLKLKRRIIYDKYREMIESMY 600
>gi|262196700|ref|YP_003267909.1| AMP-dependent synthetase and ligase [Haliangium ochraceum DSM
14365]
gi|262080047|gb|ACY16016.1| AMP-dependent synthetase and ligase [Haliangium ochraceum DSM
14365]
Length = 612
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 6/195 (3%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
VR VA L LG+E I+ EW +DLG + AG +Y + + + C H L
Sbjct: 52 RVRDVAAGLLALGIEAEDRCAIMSSTRVEWILADLGTLSAGAATTTVYPSTTIDECAHIL 111
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA---- 325
S + EDD+Q+ KI+ + + +L+ +V + G+ D ++S DEL GRA
Sbjct: 112 ADSACKVVFAEDDEQVAKIMANRDKLGELRHVVVFAGESDGEFLVSLDELERRGRARRES 171
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS 385
PDE L ++ +++ T++YTSGT G K V LSHD T+ A I + L
Sbjct: 172 EPDE-LSKISAGLSSERLATIIYTSGTTGMPKGVRLSHDCWTYCAEAIRALETIGPDDLQ 230
Query: 386 VISFLPLSHIAAQTV 400
+ +LPL+H A+ +
Sbjct: 231 YL-WLPLAHSFAKVL 244
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 12/133 (9%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEP-----YTYRLVRWLILSKVKQAMGLDRCRVS 132
G+K I +A + Q ++ L + EP Y+L L+ SK+ + G R R
Sbjct: 299 GLKFRIFRWAVARGRQ--VSALRQQGKEPRGLLALQYKLAHKLVFSKLNERFG-GRVRFF 355
Query: 133 LSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIV 192
+SG+AP+S E+ +F + I E +G++E + A TV+ +D+K VG+ + GT+ K++
Sbjct: 356 ISGSAPLSREMAEFFHAAGFLILEGYGLTETSAASTVNRLNDYKFGSVGKPLAGTKIKVL 415
Query: 193 DPDEEGNGEICLK 205
+ D GE+C++
Sbjct: 416 EED----GELCIR 424
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV Q +++ N K +++ + I++F LP D S+ GEL P++KVKR V +KY+ +
Sbjct: 543 KVRSMVQEYVNQLNEK-LASYESIKRFAILPRDLSVEEGELTPSLKVKRKLVERKYKDTL 601
Query: 481 DKFYD 485
D Y+
Sbjct: 602 DALYE 606
>gi|441505110|ref|ZP_20987100.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441427211|gb|ELR64683.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 607
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E+ ++ +A A L GL + I N P W +D A+Y +Y T+
Sbjct: 35 DISWAEFGEQIQQLALAMLAQGLNVQDKIGIFSNNMPRWTVADFAALYNRCVTVPIYPTS 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWD 317
+P+ + + +D I V + Q + L++ A+CP+L+ IV Q + P V S+D
Sbjct: 95 TPQQAAYIINNADIRILFVGEQAQHDAALEIAAECPQLERIVVMSQQVELAEHPLVCSYD 154
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ ++ G L++ L A ++ TL+YTSGT G K VML + N+ +
Sbjct: 155 DFVQQGSGDAQAELEQRLSQTAMDDLFTLIYTSGTTGTPKGVMLDYGNVAGQIEGHDEKL 214
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L+ +S + FLPLSH+ + Y++ + +D N L+
Sbjct: 215 ALDEGDVS-LCFLPLSHVFERAWTFYALHRGGVNCYLSDTNKLR 257
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y+L L+LSK+++ +G + + G A + + R+F ++ I + +GM+E
Sbjct: 324 SYKLADKLVLSKLRKILG-GQIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
T+S DD F D +G +PG + KI + +E G + ++ Y AK F + G
Sbjct: 381 TISCWDDECFNPDSIGLPMPGAEVKIGENNEILVRGPMVMRGYYKMPEESAKNFTEDGF 439
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++KF LP FS+ +GEL PT K++R + +Y I+ Y+
Sbjct: 547 KDLARFEQVKKFTLLPKAFSMDSGELTPTQKLRRKVIQDRYHREIEMMYE 596
>gi|309790177|ref|ZP_07684749.1| AMP-dependent synthetase and ligase [Oscillochloris trichoides
DG-6]
gi|308227762|gb|EFO81418.1| AMP-dependent synthetase and ligase [Oscillochloris trichoides DG6]
Length = 648
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 8/225 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +++ +VR A LG+ R V IIG N PEW Y++LG G + G+Y ++
Sbjct: 34 VTWRQFAEHVRAFAMGLASLGVRRNDVVAIIGDNRPEWLYAELGTQAIGAMSVGIYQDSA 93
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWD 317
E + L +++A + V ED +Q++K+L++ + +V YE K +P + +
Sbjct: 94 AEEVKYILQSTEARVIVAEDQEQVDKVLELWPDLSGVLKVVYYEPKGLRNYQEPFLAPFP 153
Query: 318 ELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
E E+GRA ++ +R L + + L TSGT G K ML+H N+ ++
Sbjct: 154 EFEEMGRAFDKQNPGYFERELSLGRSEDVAVLSTTSGTTGKPKLAMLTHMNLINQGRGLL 213
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNA 419
L+ +SFLPL+ + Q + + + + T+ F + +A
Sbjct: 214 DVDPLDPKD-EFVSFLPLAWVGEQMLTVAAGIQAGFTINFPESSA 257
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 69 KVTYKLQTTG-VKRWIANYAKSTSLQHYMAYLE---KNVSEPYTYRLVRWLILSKVKQAM 124
+V K+Q TG +KR +A A + + Y L R +L +K +
Sbjct: 284 QVQVKIQDTGPIKRAFYEWAMKQGYAMADARFSGKPASFGQSLGYNLARIFVLEMLKDHL 343
Query: 125 GLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTI 184
GL + + +G A + ++ R++ +L + + +V+G +E +G + K VG +
Sbjct: 344 GLRFLKRAYTGGAALGPDVFRFYHALGVNLKQVYGQTESSGLSVIHRDGAIKFQTVGSPL 403
Query: 185 PGTQTKIVDPDEEGNGEICLK 205
PGT+ KI + +GEI +K
Sbjct: 404 PGTEIKIAE-----SGEIMVK 419
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY + ++RAN + +A +I++F L + GEL T KV+R V ++Y+ I+
Sbjct: 536 EVYALIRKDVERAN-ADMPDAARIKRFLLLHKELDADDGELTRTRKVRRRLVAQRYKEIV 594
Query: 481 DKFY 484
D Y
Sbjct: 595 DALY 598
>gi|254463411|ref|ZP_05076827.1| AMP-binding enzyme [Rhodobacterales bacterium HTCC2083]
gi|206680000|gb|EDZ44487.1| AMP-binding enzyme [Rhodobacteraceae bacterium HTCC2083]
Length = 626
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 10/201 (4%)
Query: 224 ERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDK 283
+R V I+ ++ EW Y+D+G GG +G+YTT+S + + SD+ VVE+D+
Sbjct: 83 KRGEVVSILSEDSKEWMYTDMGVQSVGGICSGVYTTDSAGQLEYLVNNSDSRFLVVENDE 142
Query: 284 QLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDELMELG---RAAPDESLDRVL 335
QL+K L+V+ + P L ++ + G D P ++ DEL E+G AA ++ D +
Sbjct: 143 QLDKFLQVRDRMPDLIKVIVIDREGLHGFTD-PLIMFIDELYEIGAAYEAANPQAFDASI 201
Query: 336 ETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHI 395
+ + LVYTSGT G K M+SH N+ ++ + ++ + S + FLPL HI
Sbjct: 202 DATRPEDTAILVYTSGTTGKPKGAMISHGNLMYSVSAGLRDGPVFSTD-DQLCFLPLCHI 260
Query: 396 AAQTVDIYSVMTVAATLWFAD 416
+ + + + A+T+ FA+
Sbjct: 261 LERVFSVNAPIAAASTINFAE 281
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Query: 67 WKKVTYKL-----QTTGVKRWIANYAKSTSLQHYMA-YLEKNVSEP----YTYRLVRWLI 116
W+K+ ++ +G+++W YA++ A YL + P TYR +
Sbjct: 305 WEKIYSQVALRVGDASGMQKWA--YAQALKAGGARAEYLAEGKPVPIGTSLTYRFWDVAL 362
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L +++ +G+DR R SGAAPIS +L R++ S+ +P+ E +GM+E +G + ++ + K
Sbjct: 363 LQNLRRMIGMDRLRRGGSGAAPISPDLLRWYQSIGVPVLEGYGMTESSGVISFNSDSNNK 422
Query: 177 LDGVGRTIPGTQTKI-VDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCII 232
+ VG +PG Q ++ D + + + Y N A+ F + G R V I+
Sbjct: 423 IGTVGPALPGAQIRVATDGEVQYKAGNVFQGYWKNPDKTAETFTEDGWLRTGDVGIV 479
>gi|254509714|ref|ZP_05121781.1| AMP-binding enzyme [Rhodobacteraceae bacterium KLH11]
gi|221533425|gb|EEE36413.1| AMP-binding enzyme [Rhodobacteraceae bacterium KLH11]
Length = 628
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 134/285 (47%), Gaps = 23/285 (8%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y + + + A KLGL+R V I+ + EW + D+G GG A+G+YTT+S
Sbjct: 66 DYWQHAKWIGLALRKLGLQRGEVVAILSEDRKEWAWFDMGIQCVGGIASGVYTTDSAIQL 125
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELME 321
+ + S++ +VED++QL+K +V+ P L ++ E + P + ++L
Sbjct: 126 KYLINDSNSRFLIVEDEEQLDKFFEVENDLPDLLKVIILEDEGLHELTHPRCMMIEDLYA 185
Query: 322 LGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LG+ A E+ IA + LVYTSGT G K MLSH+NI AA
Sbjct: 186 LGQQAEREAPGVFEAEIALGTPQDTALLVYTSGTTGNPKGAMLSHENIM--AAIEAGAHS 243
Query: 379 LESAALS-VISFLPLSHIAAQTVDIYSVMTVAATLWFADK------NALKVYKATQAAID 431
L S A + FLPL HI + V IY + +T+ FA+ N +V AT A+
Sbjct: 244 LPSLATDEQLCFLPLCHILERDVSIYYPLATKSTVNFAESPETVFANLQEVSPATFTAVP 303
Query: 432 RANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 476
R K ++ Q + K + PTG + +K V +Y
Sbjct: 304 RVWEKIYAHVQFMVK-------EATPTGRFVFSRALKAGMVRAEY 341
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 16/139 (11%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ +++ +G+DR R SGAAPIS +L R++ ++ +P+ E FGM+E AG ++ +
Sbjct: 362 LVFRNLRRMLGMDRMRRGGSGAAPISPDLLRWYWAIGVPMVEGFGMTETAGIAALNTLEA 421
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF 234
K+ +G+ +PG +I + +GEI +K NV G R ++ F
Sbjct: 422 NKIGTIGKPVPGNDIRISE-----DGEIQVKGL--NVFQ--------GYWRNNAKTAETF 466
Query: 235 NAPEWFYS-DLGAIYAGGF 252
A W + D+G + GF
Sbjct: 467 TADGWLRTGDMGHVDEDGF 485
>gi|126737452|ref|ZP_01753187.1| AMP-binding enzyme [Roseobacter sp. SK209-2-6]
gi|126722037|gb|EBA18740.1| AMP-binding enzyme [Roseobacter sp. SK209-2-6]
Length = 631
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 14/222 (6%)
Query: 224 ERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDK 283
+R + I+ + EW Y+D+G AGG A+G+YTT+S + + SD+ VE+D+
Sbjct: 88 KRGEVISILSEDRREWLYTDMGVQGAGGIASGVYTTDSAAQLAYLVNDSDSRFLFVENDE 147
Query: 284 QLEKILKVKAQCPKLKAIVQYE--GKPD--KPGVISWDELMELGRAAPDESLDRVLETIA 339
QL+K L++ Q P L ++ YE G D + DEL +LGRA + IA
Sbjct: 148 QLDKYLEIADQVPGLAKVIIYERDGLHDLEHDACLFLDELYDLGRAYEAQHPGSFEAEIA 207
Query: 340 TN---ECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIA 396
+ + L+YTSGT G K ML H+N+ + + ++ S + FLPL HI
Sbjct: 208 KSRPEDTALLIYTSGTTGMPKGAMLGHENVLASMESGARALEV-SREDEQLCFLPLCHIL 266
Query: 397 AQTVDIYSVMTVAATLWFADK------NALKVYKATQAAIDR 432
+ V +Y + A+T+ FA+ N +V AT A+ R
Sbjct: 267 ERNVSVYFPLGAASTVNFAESPETVFDNMQEVSPATFFAVPR 308
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 67 WKKVTYKL-----QTTGVKRWI---ANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILS 118
W+K+ ++ + T + RW A A + + M E Y + +L
Sbjct: 310 WEKIYSRVLVLAQEATPLGRWAFHQAIKAGAARADYVMTGREAPSGVSARYAFWDFAVLR 369
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
+++ +G+D+ R +GAAPIS EL +++ S+ +P+ E +GM+E AG T++ +
Sbjct: 370 NLRRMLGMDKMRRGGTGAAPISPELLKWYWSIGVPLIEGYGMTENAGISTINTLEKNSPG 429
Query: 179 GVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNA 236
VGR +PG Q +I + E + G + Y N A+ F G R V + N
Sbjct: 430 TVGRPVPGVQLRISEEGEIQTLGLNNFQGYWRNNEKTAETFTADGWLRTGDVGRVDENG 488
>gi|311743003|ref|ZP_07716811.1| long-chain-fatty-acid--CoA ligase [Aeromicrobium marinum DSM 15272]
gi|311313683|gb|EFQ83592.1| long-chain-fatty-acid--CoA ligase [Aeromicrobium marinum DSM 15272]
Length = 611
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 5/205 (2%)
Query: 194 PDEEGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
PD + N + E +V +A + LG+ V I EW ++DL AGG
Sbjct: 41 PDADENWHSLTWAETGDHVTRLAAGLVSLGIGAEERVAIASGTRYEWIFADLAINAAGGA 100
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
+Y T + L S + I EDD+Q+ K+++ KA+ P ++ +V ++G D
Sbjct: 101 TTTVYPTTVAGDVAYILADSGSKIVFAEDDEQIAKLVEQKAELPAVEKVVTFDGATDGDW 160
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNE---CCTLVYTSGTEGASKPVMLSHDNITFN 369
+I D+L +LG A E D V E +A E TL+YTSGT G K V LSHD TF
Sbjct: 161 IIGLDDLEKLGEAYLSEHPDIVTERVAATEPSSLATLIYTSGTTGRPKGVRLSHDGWTFE 220
Query: 370 AACIIQYFKLESAALSVISFLPLSH 394
A + L L +LP++H
Sbjct: 221 GASVASQGILSVEDLE-FRWLPMAH 244
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 78 GVKRWIANYAKSTSLQH-YMAYLEKNVSEPYT--YRLVRWLILSKVKQAMGLDRCRVSLS 134
GVK + +A+ L+H + K V + + + L+ SKV+ G R R +S
Sbjct: 305 GVKLKLFRWAEKVGLEHSRLVRAGKPVPKALAIQHGIADKLVFSKVRDRFG-GRVRFFIS 363
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
GAA +S+++ +F + + I E +G++E + V+ PD FKL VG P + KI
Sbjct: 364 GAAALSSDVAEWFHAAGVLILEGYGLTETSAGAFVNHPDRFKLGTVGHPFPDVEVKIA-- 421
Query: 195 DEEGNGEICLK 205
G+GEI +K
Sbjct: 422 ---GDGEILIK 429
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 438 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++ + I+K+ LP D S+ GE+ P++KVKR V +KY I++ FY
Sbjct: 564 LNQWETIKKWAILPNDLSVEGGEITPSLKVKRKVVEEKYADILNGFY 610
>gi|256820350|ref|YP_003141629.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
gi|256581933|gb|ACU93068.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
Length = 599
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 222 GLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVED 281
G++ +V I+ N P+W +DL + +YTTN+ E L+ + ++ + V D
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAEQALYVMNHAEVKVLFVGD 116
Query: 282 DKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAP-DESLDRVLET 337
+KQ K L+V +QCP L+ IV + + +K I W++ + LG + D LD+ +
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVCDNEVPLTEKQYSIHWNDFLALGNSPQYDTELDKRIAE 176
Query: 338 IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAA 397
++ T++YTSGT G K VML+++N+ F + + ++FLPLSH+
Sbjct: 177 RNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFE 236
Query: 398 QTVDIYSVMTVAATLWFADKNALK 421
+ + + + D N ++
Sbjct: 237 RAWTYFCLYKAVTVYYLDDTNLVR 260
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L ++ K+K+A+G R + G A + + R+F S+ I + +GM+E +
Sbjct: 328 YNLFDKMVYKKLKEALG-GRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATIS 386
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
D VG +P Q +I + +E G + +K Y N AKAF G R
Sbjct: 387 CWGDDRINPQSVGNVMPNVQVRIGEENEILVKGGMVMKGYYKNPEETAKAFTPDGYLR 444
>gi|392409735|ref|YP_006446342.1| AMP-forming long-chain acyl-CoA synthetase [Desulfomonile tiedjei
DSM 6799]
gi|390622871|gb|AFM24078.1| AMP-forming long-chain acyl-CoA synthetase [Desulfomonile tiedjei
DSM 6799]
Length = 598
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 8/218 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
EY +V+ A LGL + I+G N EW Y+DL A + + G+Y TN
Sbjct: 38 EYWEHVKNFALGLKVLGLNAGDKISILGDNCREWLYADLAAQGSSAVSVGIYPTNVAAQV 97
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELME 321
+ L S+++ V D +Q++K+L+VK Q P LK IV + K P ++S+ ++
Sbjct: 98 KYILENSESSFVVARDQEQVDKVLEVKHQLPLLKNIVVVDMKGLRRYSDPMIVSFSDVES 157
Query: 322 LGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LG+ A + ++ LVYTSGT GA K ML+H N+ A + Q
Sbjct: 158 LGKDLDAKHPGLFEDMVRATQPEGVAILVYTSGTTGAPKGAMLTHKNMLSMIAGVSQILN 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
S +S LPL HIA + + M T+ FA+
Sbjct: 218 FRDTD-SFVSALPLCHIAERMFSLIFPMWAGCTVNFAE 254
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 114 WLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPD 173
W++ +K +GL R+ +SGAAPIS EL R+++++ +PI E +GM+EC G + +
Sbjct: 333 WMLFRPLKNHLGLLEARICVSGAAPISPELVRFYIAIGVPIREAYGMTECTGISCLPRTN 392
Query: 174 DFKLDGVGRTIPGTQTKIVDPDE 196
+ K+ VG IPG + K+ D E
Sbjct: 393 EPKIGWVGPPIPGIEMKLADDGE 415
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 408 VAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKV 467
+A T + + N +V K Q + +N K+ + + I+KF L + EL TMKV
Sbjct: 523 IAYTNYKSLANHPEVQKLIQGEVATSN-KNFARVETIKKFTILDKELDQDDEELTATMKV 581
Query: 468 KRPFVVKKYQSIIDKFY 484
KR V +KY+ +IDK Y
Sbjct: 582 KRSVVERKYKDLIDKMY 598
>gi|340616106|ref|YP_004734559.1| long-chain-fatty-acid-CoA ligase [Zobellia galactanivorans]
gi|339730903|emb|CAZ94167.1| Long-chain-fatty-acid-CoA ligase [Zobellia galactanivorans]
Length = 591
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 10/216 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY +++A L++G+ + +I N EW D+G + G +Y T S E
Sbjct: 38 QEYIDQANAMSRALLRMGVRPNDKIAVISMTNRTEWNIMDIGILQLGAQNVPIYPTISEE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE--GKPDKPGVISWDELME 321
+ L S A +C V ++ +K+ VK Q P L I ++ G+ D +W +++E
Sbjct: 98 DYAYVLNHSGAKLCFVSCEEVYKKVSSVKDQVPSLDHIYSFDEIGECD-----NWKKVLE 152
Query: 322 LG-RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
LG + E ++++ + + +++ TL+YTSGT G K VMLSH+N+ NA + F +E
Sbjct: 153 LGADTSNQEEVEQLKKQVKSDDLATLIYTSGTTGRPKGVMLSHNNLVSNALESSKRFPIE 212
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPL H+ + + IY T+++A+
Sbjct: 213 DGKTKALSFLPLCHVYERML-IYLYQFRGVTIYYAE 247
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ +G+K+ + +A + L+ Y Y + L R LI SK K+ +G + ++ S
Sbjct: 284 ELSGIKKALFFWAVNLGLK-YEPYGKNGWWYEQQLSLARKLIFSKWKEGLGGNLSLIA-S 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+A + L R F + + + E +G+SE + +V+ D F++ VG+ I T+ KI
Sbjct: 342 GSAALQPRLSRIFNAAEFGLMEGYGLSETSPVISVNDMRDGGFRIGTVGKPIDRTEVKIA 401
Query: 193 DPDEEGNGEICLK 205
+GEIC+K
Sbjct: 402 -----SDGEICIK 409
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +D AN K + +K+++F P +SI G L PT+K++R V +KY + + Y
Sbjct: 532 QQEVDLANEK-FAKWEKVKQFRLTPDVWSINEGHLTPTLKLRRKIVKEKYMDLYNDIY 588
>gi|429747308|ref|ZP_19280584.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429163446|gb|EKY05672.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 599
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 4/204 (1%)
Query: 222 GLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVED 281
G++ +V I+ N P+W +DL + +YTTN+ E L+ + ++ + V D
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAEQALYVMNHAEGKVLFVGD 116
Query: 282 DKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAP-DESLDRVLET 337
+KQ K L+V +QCP L+ IV + + +K I W++ + LG + D LD+ +
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVCDNEVPLTEKQYSIHWNDFLALGNSPQYDTELDKRIAE 176
Query: 338 IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAA 397
++ T++YTSGT G K VML++ N+ F + + ++FLPLSH+
Sbjct: 177 RNLDDLFTIIYTSGTTGEPKGVMLTYQNLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFE 236
Query: 398 QTVDIYSVMTVAATLWFADKNALK 421
+ + + + D N ++
Sbjct: 237 RAWTYFCLYKAVTVYYLDDTNLVR 260
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L ++ K+K+A+G R + G A + + R+F S+ I + +GM+E +
Sbjct: 328 YNLFDKMVYKKLKEALG-GRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATIS 386
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
D VG +P Q +I + +E G + +K Y N AKAF G R
Sbjct: 387 CWGDDRINPQSVGNVMPNVQVRIGEENEILVKGGMVMKGYYKNPEETAKAFTPDGYLR 444
>gi|371775800|ref|ZP_09482122.1| long chain fatty-acid CoA ligase [Anaerophaga sp. HS1]
Length = 606
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 14/222 (6%)
Query: 187 TQTKIVDPDEEGNG-EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLG 245
++ I+ +GN + +Y N + A L LG ++ + I N PEW + D+G
Sbjct: 18 NKSDILATKRDGNWIKFSADDYSRNAKNFAYGLLALGFKKGDKIATISNNRPEWNFVDMG 77
Query: 246 AIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ-- 303
AG +Y T + H L SDA + +V D ++ + + KLK +
Sbjct: 78 MAMAGVVHVPVYPTLGEDDFKHILSHSDAKMLIVADLGTYRRLQPIARKISKLKKVYTFN 137
Query: 304 -YEGKPDKPGVISWDELMELGRAAP---DESLDRVLETIATNECCTLVYTSGTEGASKPV 359
YEG P W E+ + G A E L ++ E+I ++ T++YTSGT G K V
Sbjct: 138 YYEGIP------HWSEISKEGEDAKMKYKEKLQKISESIKPDDLLTIIYTSGTTGLPKGV 191
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVD 401
MLSH NI N + + L ++SFLPL H+ + V+
Sbjct: 192 MLSHRNILSNVEGVFNLYPL-GPDDRILSFLPLCHVYERMVN 232
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECA---GAH 167
+ R L+ +K +Q G + + +SG A + L R F + IP+ E +GM+E + A+
Sbjct: 318 IARKLVFAKWQQTFG-GKLKFVISGGAALQPRLSRLFFAAGIPLMEGYGMTETSPVIAAN 376
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+S P+ + VG + Q KI D +GEI +K
Sbjct: 377 HLSEPNSLLIGTVGPVLKNIQVKIDD-----DGEILVK 409
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V K Q +++ N K + ++I++F + ++S TGEL PT+K++R + KY +++
Sbjct: 528 VLKVFQKEVEKYN-KQLGRTEQIKRFRLVHEEWSPATGELSPTLKLRRRVIYNKYANLLR 586
Query: 482 KFYD 485
+ Y+
Sbjct: 587 EIYN 590
>gi|336173107|ref|YP_004580245.1| long-chain-fatty-acid--CoA ligase [Lacinutrix sp. 5H-3-7-4]
gi|334727679|gb|AEH01817.1| Long-chain-fatty-acid--CoA ligase [Lacinutrix sp. 5H-3-7-4]
Length = 591
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 8/218 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTN 260
+ KEY V++A L++G+++ + +I N EW D+G + G +Y T
Sbjct: 35 MSTKEYVDKANAVSRALLRMGIQKNDKIAVISTTNRTEWNIMDIGILQLGAQNIPIYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S + + L S++ C V D++ L K+ K+KA KLK + + G + EL
Sbjct: 95 SSDDYEYVLNHSESIYCFVSDEEVLAKVNKIKANT-KLKEVYSFN---HIEGCKHYSELF 150
Query: 321 ELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK- 378
ELG+ +++ + ++ ++ N+ T++YTSGT G K VMLSH+NIT NA
Sbjct: 151 ELGKDETNQNEVQERMDAVSPNDLATIIYTSGTTGKPKGVMLSHNNITSNALDASHRLPF 210
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ S ++SFLP+ H+ + + IY A+++FA+
Sbjct: 211 MNSKENRILSFLPICHVFERVL-IYLYQYAGASIYFAE 247
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N+ ++ Q +D N K ++I++FE P +SI +G L PTMK+KR + Y+
Sbjct: 524 NSKEIILRIQQEVDACN-KHFGKWEQIKRFELTPDVWSIDSGHLTPTMKMKRTVIKDIYK 582
Query: 478 SIIDKFY 484
+ +K Y
Sbjct: 583 ELYNKIY 589
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 75 QTTGVKR----WIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCR 130
+ +GVK+ W N A + + Y + ++ LI SK ++A+G
Sbjct: 284 ELSGVKKALFFWAVNLA-----EKWEPYGANGAWYEFKLKIANKLIFSKWREALG-GELN 337
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQ 188
+SG+A + L R F + + + + +G++E + +V + FKL VG+ I +
Sbjct: 338 TMVSGSAALQVRLSRIFSAAGMQVMQGYGLTETSPVISVEMYRNKHFKLGTVGKPIKNVE 397
Query: 189 TKIVDPDEEGNGEICLK 205
KI + +GEI +K
Sbjct: 398 VKIAE-----DGEILVK 409
>gi|410460893|ref|ZP_11314546.1| AMP-dependent synthetase and ligase [Bacillus azotoformans LMG
9581]
gi|409926098|gb|EKN63294.1| AMP-dependent synthetase and ligase [Bacillus azotoformans LMG
9581]
Length = 637
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y V+ A +LGL R + IIG N PEW S++ GG + G+Y + P
Sbjct: 39 YLEQVKQFALGLSELGLRRGDKLAIIGDNRPEWVISEIATQSLGGVSVGIYQESLPNEIS 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMEL 322
+ + SDA I VVED +Q++K+L++K + PK++ I+ Y+ + + P ++ + ++ +
Sbjct: 99 YIIDNSDACIVVVEDQEQVDKLLEIKQEIPKVRWIIYYDDRGMRDYNDPNLLFFKDVQSI 158
Query: 323 GRAAPD---ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
G+ + + ++ LE + L YTSGT G K ML++ N+ F+ A +
Sbjct: 159 GKKVNEIDPKLFEQELEKGKYEDVAILSYTSGTTGNPKGTMLTYQNL-FDMAKNLSSIDP 217
Query: 380 ESAALSVISFLPLSHIAAQTVDI 402
+SFLPL+ I Q + I
Sbjct: 218 LEGNDQYLSFLPLAWIGEQMMSI 240
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L +L+ S ++ +GL R + + +G AP+ ++ R+F S+ + + ++G +E +G
Sbjct: 328 YNLADYLMFSAIRDHLGLLRIKRAYTGGAPLGPDVFRFFHSIGVNVKSIYGQTEVSGISI 387
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V D K+D VG +PGT KI + GEI +K
Sbjct: 388 VHRDGDIKIDSVGVALPGTMVKISE-----EGEILIK 419
>gi|146302455|ref|YP_001197046.1| AMP-dependent synthetase/ligase [Flavobacterium johnsoniae UW101]
gi|146156873|gb|ABQ07727.1| AMP-dependent synthetase and ligase [Flavobacterium johnsoniae
UW101]
Length = 592
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY A V++A L++G+++ + +I N EW D+G + G +Y T + E
Sbjct: 38 EEYIAKANAVSRALLRMGVQKDDKIALISSNNRTEWNIMDIGILQTGAQNVPIYPTIAEE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S + C V DD+ L+K+ +KA P LK + + + PG W +L+ G
Sbjct: 98 DYEYILNHSGSIYCFVSDDEVLQKVNAIKANVPTLKEVYSFN---EIPGCKHWSDLLLAG 154
Query: 324 RAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
++S ++ ++I T++ T++YTSGT G K VMLSH NI N +
Sbjct: 155 EDESNQSEVEARKDSIHTDDLATIIYTSGTTGRPKGVMLSHKNIVSNVLDSAPRIPFDPG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ HI + + +Y +++F +
Sbjct: 215 KSTALSFLPICHIFERMI-LYIYQYYGVSVYFGE 247
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ TG+K+ + +A L+ Y Y + ++ R LI SK K+ +G + + +S
Sbjct: 284 ELTGIKKKLFFWAIDLGLK-YEPYGANGFWYEFQLKIARKLIFSKWKEGLG-GKLDLMVS 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+A + L R F + +IP+ E +G++E + V+ + FK+ VG+ I + KI
Sbjct: 342 GSAALQPRLSRVFAAAEIPVMEGYGLTETSPVIAVNDQRNRGFKIGTVGKPIRNVEVKIA 401
Query: 193 DPDEEGNGEICLK 205
+ +GEI LK
Sbjct: 402 E-----DGEILLK 409
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K + +++++FE P +SI G+L PT+K+KR + + Y+ + K YD
Sbjct: 541 KKFGHWEQVKRFELTPDVWSIDGGQLTPTLKLKRKIIKEIYKDLYAKIYD 590
>gi|86133145|ref|ZP_01051727.1| long-chain fatty-acid-CoA ligase [Polaribacter sp. MED152]
gi|85820008|gb|EAQ41155.1| long-chain fatty-acid-CoA ligase [Polaribacter sp. MED152]
Length = 592
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY +++ LKLG+ + II N EW D+G++ G +Y T S E
Sbjct: 39 QEYINKANQLSRGLLKLGINPNEKIAIISTTNRTEWNVCDIGSLQLGAQTVPIYPTISKE 98
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S+A C V D+ +EK+ K+K KLK + ++ D G SW E++ELG
Sbjct: 99 DYEYVLNHSEATYCFVSDETIIEKLNKIKGNT-KLKEVYTFD---DIKGEKSWTEVLELG 154
Query: 324 RAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+ ++ ++ + + + TL+YTSGT G K VMLSH NI N + LE
Sbjct: 155 KDDSNQPEVEARKKDVKPGDLATLIYTSGTTGRPKGVMLSHSNIVSNVLTSEERVPLEKG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNALKVYKATQAAIDR 432
+SFLP+ H+ + + +Y ++FA+ +NA ++ A+ R
Sbjct: 215 KDKALSFLPVCHVFERMI-LYLYQLCGTEIYFAESLEKLTENAQEIKPNVMTAVPR 269
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV Q ID+ N + ++I++FE P ++SI G L PTMK+KR + Y+ +
Sbjct: 529 KVIAKYQRTIDKCN-EHFGKWERIKRFELTPDEWSIDGGHLTPTMKMKREIIKNIYKDLY 587
Query: 481 DKFYD 485
DK Y+
Sbjct: 588 DKIYN 592
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L R LI SK + A+G ++ +SG+A + L R F + ++PI E +G++E + +V+
Sbjct: 319 LARKLIFSKWQAALG-GELKLMVSGSAALQPRLTRIFAAAEMPIMEGYGLTETSPVISVN 377
Query: 171 -----APDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
FK+ VG+ I + KI + NGEI +K
Sbjct: 378 FVNQGGERGFKVGTVGKVINRVEVKIAE-----NGEILVK 412
>gi|429757066|ref|ZP_19289623.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429169713|gb|EKY11454.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 599
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 222 GLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVED 281
G++ +V I+ N P+W +DL + +YTTN+ E L+ + ++ + V D
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAEQALYVMNHAEVKVLFVGD 116
Query: 282 DKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAP-DESLDRVLET 337
+KQ K L+V +QCP L+ IV + + +K I W++ + LG + D LD+ +
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVCDNEVPLTEKQYSIHWNDFLVLGNSPQYDTELDKRIAE 176
Query: 338 IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAA 397
++ T++YTSGT G K VML+++N+ F + + ++FLPLSH+
Sbjct: 177 RNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFE 236
Query: 398 QTVDIYSVMTVAATLWFADKNALK 421
+ + + + D N ++
Sbjct: 237 RAWTYFCLYKAITVYYLDDTNLVR 260
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L ++ K+K+A+G R + G A + + R+F S+ I + +GM+E +
Sbjct: 328 YNLFDKMVYKKLKEALG-GRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATIS 386
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
D VG +P Q +I + +E G + +K Y N AKAF G R
Sbjct: 387 CWGDDRINPQSVGNVMPNVQVRIGEENEILVKGGMVMKGYYKNPEETAKAFTPDGYLR 444
>gi|398803179|ref|ZP_10562285.1| AMP-forming long-chain acyl-CoA synthetase [Polaromonas sp. CF318]
gi|398097058|gb|EJL87370.1| AMP-forming long-chain acyl-CoA synthetase [Polaromonas sp. CF318]
Length = 617
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A L LG R I+ EW +DL + GG +G+Y T++ +
Sbjct: 60 VREIAAGLLSLGFARGECASILSNTVIEWVLADLAVLSCGGVCSGIYPTDAASQVHYLCE 119
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EG--KPDKPGVISWDELMELGRAA 326
S + + VEDD+QL+K L+V+ Q P L+ ++ + EG + D PGV+S D L LGRA
Sbjct: 120 DSRSTLLFVEDDEQLDKALEVRPQLPLLRQVIVFDMEGLRELDDPGVMSLDALRALGRAY 179
Query: 327 PDESLDRVLETIATNEC-----CTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
E D V E +EC LVYTSGT G K M S + F A +
Sbjct: 180 LAEHPDAVEER--ADECQPEDLAILVYTSGTTGKPKGAMHSQRGLVFTARG-YNTLVAQD 236
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ FLPL HIA + Y + A L F +
Sbjct: 237 EDDERMCFLPLCHIAERMGGEYFSLYAGAKLNFVEN 272
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L RWL L+ ++ +G+ R R ++GAAPIS +L +++++L +P+ EV+GM+E GA +
Sbjct: 345 FTLARWLALNNTRKLIGIHRARFCVTGAAPISPDLVKWYMALGVPMLEVWGMTETCGAAS 404
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K +G G +DP +GEI ++
Sbjct: 405 GVPASRMKPGSIGPA-AGYNEMRLDP---ASGEILVR 437
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
AL+V + Q+ IDR N K + ++I+KF L + EL PTMK+KR V +KY
Sbjct: 552 RALEVQELIQSEIDRVNRK-FARVEQIKKFFLLDTQLTAEDEELTPTMKLKRKLVEQKYA 610
Query: 478 SIIDKFY 484
I+ Y
Sbjct: 611 PHIEAMY 617
>gi|420151040|ref|ZP_14658193.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751223|gb|EJF35022.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 599
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 4/204 (1%)
Query: 222 GLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVED 281
G++ +V I+ N P+W DL + +YTTN+ E L+ + ++ + V D
Sbjct: 57 GIQPQETVGILAQNTPQWSLVDLACLQIRAIPVPIYTTNTAEQALYVMNHAEVKVLFVGD 116
Query: 282 DKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAP-DESLDRVLET 337
+KQ K L+V +QCP L+ IV + + +K I W++ + LG + D LD+ +
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVCDNEVPLTEKQYSIHWNDFLALGNSPQYDTELDKRIVE 176
Query: 338 IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAA 397
++ T++YTSGT G K VML+++N+ F + + ++FLPLSH+
Sbjct: 177 RNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFE 236
Query: 398 QTVDIYSVMTVAATLWFADKNALK 421
+ + + + D N ++
Sbjct: 237 RAWTYFCLYKAVTVYYLDDTNLVR 260
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L ++ K+K+A+G R + G A + + R+F S+ I + +GM+E +
Sbjct: 328 YNLFDKMVYKKLKEALG-GRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATIS 386
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
D VG +P Q +I + +E G + +K Y N AKAF G R
Sbjct: 387 CWGDDRINPQSVGNVMPNVQVRIGEENEILVKGGMVMKGYYKNPEETAKAFTPDGYLR 444
>gi|393780659|ref|ZP_10368867.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608113|gb|EIW90975.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 599
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 20/280 (7%)
Query: 222 GLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVED 281
G++ +V I+ N P+W +DL + +YTTN+ + L+ + ++ + V D
Sbjct: 57 GIQPQETVGILAQNTPQWSLADLACLQIRAIPVPIYTTNTAKQALYVMNHAEVKVLFVGD 116
Query: 282 DKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAP-DESLDRVLET 337
+KQ K L+V +QCP L+ IV + + +K I W++ + LG + D LD+ +
Sbjct: 117 EKQYHKALEVASQCPTLQMIVVCDNEVPLTEKQYSIHWNDFLALGNSPQYDTELDKRIAE 176
Query: 338 IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAA 397
++ T++YTSGT G K VML+++N+ F + + ++FLPLSH+
Sbjct: 177 RNLDDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFE 236
Query: 398 QTVDIYSVMTVAATLWFADKNALK-----VYKATQAAIDR------ANLKSISNAQKIQK 446
+ + + + D N ++ V A+ R A + ++A K
Sbjct: 237 RAWTYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASSFVK 296
Query: 447 FEFLPADFSIPTGELGPTMKV--KRP-FVVKKYQSIIDKF 483
+ +I TG+ T++ K+P FV++K ++ DK
Sbjct: 297 RKLF--RLAIATGKRVLTLREQGKKPSFVLQKAYNLFDKM 334
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L ++ K+K+A+G R + G A + + R+F S+ I + +GM+E +
Sbjct: 328 YNLFDKMVYKKLKEALG-GRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATIS 386
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAF 218
D VG +P Q +I + +E G + +K Y N AKAF
Sbjct: 387 CWGDDRINPQSVGNVMPNVQVRIGEENEILVKGGMVMKGYYKNPEETAKAF 437
>gi|381188672|ref|ZP_09896232.1| long-chain-fatty-acid--CoA ligase [Flavobacterium frigoris PS1]
gi|379649310|gb|EIA07885.1| long-chain-fatty-acid--CoA ligase [Flavobacterium frigoris PS1]
Length = 591
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY A V++A L++GL++ + +I N EW D+G + G +Y T + +
Sbjct: 39 QEYIAKANAVSRALLRMGLQKNDKIALISSNNRTEWNIMDIGILQTGAQTIPIYPTIAED 98
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S+A C V D++ L K+ +K + P+LK + + G SW+EL+ LG
Sbjct: 99 DYEYILNHSEAIYCFVSDEEVLNKVNLIKHKVPRLKEVYSFN---TIEGCKSWNELLILG 155
Query: 324 -RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+ + ++ + T+E T++YTSGT G K VMLSH NI + E+
Sbjct: 156 LDTSNQDEVEARKNNVKTDELATIIYTSGTTGKPKGVMLSHKNIVSDVLNSAPRIPFEAG 215
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ HI + + +Y +++F +
Sbjct: 216 SSRALSFLPVCHIFERMI-LYLYQYYGVSIYFGE 248
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV Q ID N K N +KI++FE P +SI G+L PT+K+KR V++KY I
Sbjct: 528 KVIARIQEEIDGLNAK-FGNWEKIKRFELTPDVWSIEGGQLTPTLKLKRKIVMQKY---I 583
Query: 481 DKFYDV 486
D FY +
Sbjct: 584 DLFYKI 589
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ TG+K+ + +A L+ + Y ++ R LI SK K+ +G + +S
Sbjct: 285 ELTGIKKALFFWAIDLGLR-FEPYGANGTWYEMQLKIARKLIFSKWKEGLG-GNLDLMVS 342
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+A + L R F + +IP+ E +G++E + +V+ + FK+ VG+ I + I
Sbjct: 343 GSAALQPRLARIFAAAEIPVMEGYGLTETSPVISVNDMRNKGFKVGTVGKVIDSVEVIIA 402
Query: 193 DPDEEGNGEICLK 205
+ +GEI K
Sbjct: 403 E-----DGEILCK 410
>gi|271967235|ref|YP_003341431.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
gi|270510410|gb|ACZ88688.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
Length = 612
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 4/214 (1%)
Query: 193 DPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
DP E G + E + +A F+ LGL +V ++ N E +DLGA++AGG
Sbjct: 39 DPVEGGWATLTYAEARQRILEIAAGFVALGLRPGEAVALMMVNRSEHVLADLGAVHAGGV 98
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
+Y T +P+ A I V+ L + V P + +V EG P
Sbjct: 99 PCSVYATFTPDQVAFVAGDVGARIVVLGGPADLARWEPVLDGLPGISKVVMLEGAPSGDR 158
Query: 313 VISWDELMELGRAAPDE---SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
+ W+E + LGRA E S++ + ++ T++YTSGT G K V L+H N+ F
Sbjct: 159 FLGWEEFLALGRARLAEDPASIEDRWRAVTADDTLTVLYTSGTTGNPKGVPLTHANVFFE 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
A + L + IS+L +HIA + + +Y
Sbjct: 219 VAATSRMVALPDRG-TQISYLTYAHIAERVLSLY 251
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 16/138 (11%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+LS ++ +GLD S AAP+ E++R+F L + + +V+GM+E GA T +APD F
Sbjct: 345 LLSIIRSMIGLDNAAWLASAAAPMPLEVQRFFAGLGMRVIDVYGMTETTGAFTANAPDRF 404
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN 235
KL VG+ PG + +I + +GEI + AN R L R + + +
Sbjct: 405 KLGTVGQAGPGVEVRIAE-----DGEIVTRS-PANARGY--------LNRPEATAEL-LD 449
Query: 236 APEWFYS-DLGAIYAGGF 252
W ++ D+G+I GF
Sbjct: 450 EDGWLHTGDVGSIDEDGF 467
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V K +AA+ AN K ++ Q+++++ LP +++ T EL P++K+KR + KY IID
Sbjct: 548 VLKVVEAAVATANDK-LARVQQVKRWRLLPVEWTAETEELTPSLKLKRRVIHAKYAEIID 606
Query: 482 KFYD 485
Y+
Sbjct: 607 GMYE 610
>gi|239817896|ref|YP_002946806.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
gi|239804473|gb|ACS21540.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 626
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 98/214 (45%), Gaps = 8/214 (3%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A L LG I+ EW D+ + GG + G+Y T++ +
Sbjct: 68 VREIAGGLLALGFGPGECASILANTVIEWVLCDVAVLSCGGVSNGIYPTDAASQVHYLCE 127
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EG--KPDKPGVISWDELMELGR-- 324
S + VEDD+QL+K L+V+AQ P L+ IV + EG + D PGVIS D L LGR
Sbjct: 128 DSRTTLLFVEDDEQLDKALEVRAQLPMLRKIVVFDMEGLRELDDPGVISLDALRALGRDH 187
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
A ++LD + + LVYTSGT G K M SH + + +
Sbjct: 188 LQAHPQALDERIAACRPEDLAILVYTSGTTGKPKGAMHSHRGLVYTMRG-YNTLLAQGEG 246
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ FLPL HIA + Y M + L F +
Sbjct: 247 DERMCFLPLCHIAERMGGEYFAMYTGSILNFVEN 280
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL RWL L V++ +G+ R R ++GAAPIS EL R++L+L +P+ EV+GM+E GA T
Sbjct: 353 FRLARWLALDNVRKLIGIHRARFLVTGAAPISPELVRWYLALGVPMLEVWGMTESCGAST 412
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
P + +G P T V D + GEI ++
Sbjct: 413 GVPPSRIRPGSIG---PATSYNEVRLDPQ-TGEILVR 445
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
A +V Q IDR N K + ++I+KF L S EL PTMK+KR V KY
Sbjct: 560 RAQEVLDLIQGEIDRVNAK-FARVEQIKKFFLLETQLSAEDEELTPTMKLKRKLVQAKYA 618
Query: 478 SIIDKFY 484
I+ Y
Sbjct: 619 ERIEAMY 625
>gi|375098236|ref|ZP_09744501.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
marina XMU15]
gi|374658969|gb|EHR53802.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
marina XMU15]
Length = 613
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 106/224 (47%), Gaps = 7/224 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E EY V VA LG+E V + N PEW +DL A G G+Y T+
Sbjct: 50 EWTWAEYAHRVACVAAGLRSLGVEPGDRVAVHAENRPEWVIADLAAQGIGAQCVGIYPTS 109
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE--GKPDKPGVISWDE 318
+ L A + V ED++QL+K L V+ P+L+ IV + G G++++ E
Sbjct: 110 PAAEVEYLLKHCGATVLVAEDEEQLDKALAVRDSLPRLRHIVVIDPRGVGQVDGLLTFAE 169
Query: 319 LMELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
L E G A D E++A+ + +VYTSGT G K M+SH N+ +A +Q
Sbjct: 170 LEESGERAGDAQAGYA-ESVASLDPGDTAIIVYTSGTTGPPKGAMISHTNLVASARTFVQ 228
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNA 419
S A V+S+LPL HIA + + + + + F + A
Sbjct: 229 ALD-GSDADEVLSYLPLCHIAERLTSVIDSVWAGSVVNFGEGGA 271
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L +++ +GL R RV+LSGAAPI+ ++ Y ++ +P+ E +G +E T++ D
Sbjct: 347 LMLRPLREKLGLARVRVALSGAAPIAPQVLEYLWAIGVPVREGYGQTENTALCTLTPSSD 406
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+L VG + G + +I D +GEI +
Sbjct: 407 IRLGSVGTALDGVELRIAD-----DGEILTR 432
>gi|363422384|ref|ZP_09310460.1| long-chain fatty-acid--CoA ligase [Rhodococcus pyridinivorans AK37]
gi|359732983|gb|EHK81987.1| long-chain fatty-acid--CoA ligase [Rhodococcus pyridinivorans AK37]
Length = 614
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 194 PD-EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
PD ++G + ++ VR +A + LG+E V + EW DL + AG
Sbjct: 44 PDGKDGWTSVTWEQTGDRVRLLAAGLISLGIEAEDRVALASSTRYEWVLGDLAVMCAGAA 103
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
+Y T + + S + I + ED Q+EK++ ++ P++ +V EG D
Sbjct: 104 TTTVYPTTHADDVAFIVADSGSRIVIAEDAGQVEKLVSHRSDLPEVAKVVVVEGTGDGDW 163
Query: 313 VISWDELMELGRAAPDESLDRVL---ETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
VI++DEL +LGR E VL +I TL+YTSGT G K V L H T+
Sbjct: 164 VINFDELADLGRGLLAEDSGAVLNRIHSIRAEHLATLIYTSGTTGKPKGVRLPHSAWTYE 223
Query: 370 AACIIQYFKLESAALSVISFLPLSHI 395
AA I L S L + +LPLSH+
Sbjct: 224 AAAIDALHMLSSDDLQYL-WLPLSHV 248
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S +++ G R +SG+A ++ E+ +F ++ IP+ E +G++E + A V+ P
Sbjct: 348 LVFSTIRERFG-GHLRFFISGSAALNPEVGEWFDAVGIPVLEGYGLTETSAATFVNRPYA 406
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ VG +PGT+ +I + +GE+ ++
Sbjct: 407 NRIGTVGWPVPGTEVRIAE-----DGEVLVR 432
>gi|325955427|ref|YP_004239087.1| long-chain-fatty-acid--CoA ligase [Weeksella virosa DSM 16922]
gi|323438045|gb|ADX68509.1| Long-chain-fatty-acid--CoA ligase [Weeksella virosa DSM 16922]
Length = 587
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 9/223 (4%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCII-GFNAPEWFYSDLGAIYAGGFAA 254
NGE +EY T ++ LKLG++ + I+ N EW D+G G +
Sbjct: 28 NGEWKKTSTQEYVNKANTFSRGLLKLGIKPQDKIGIVTANNRTEWNICDMGMQQVGVISV 87
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T SP+ + L S+ IC+V D +K+L+ K P L I ++ D G+
Sbjct: 88 PLYPTLSPKDYEYVLSNSECKICIVSDKDLYDKVLQAKQNVPTLTGIYLFD---DVAGLP 144
Query: 315 SWDELMELGRAAPDESLDRVLET-IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+W E+++LG +S L+ + + T++YTSGT G K V+LSH+NI N
Sbjct: 145 NWQEILDLGADDSTQSEVEALKNLVKAQDIATIIYTSGTTGKPKGVVLSHENIVSNVLMS 204
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP++HI + + +Y ++ +++A+
Sbjct: 205 TPAVPNLPSPSRALSFLPINHILERMI-VYLYLSRGIGIYYAE 246
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYDV 486
Q +DR N + + + ++++KFE ++SI TGEL PT+K+KR +++K + + +K YD+
Sbjct: 527 QKEVDRMN-RQLGHWEQVKKFELTSNEWSIETGELTPTLKLKRKIIMEKNKELYNKLYDI 585
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 68 KKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQ 122
+KV K+ TTG +K I +A S + + Y + + + ++ L+ +K ++
Sbjct: 271 EKVYDKIYTTGANAGGLKTKIFMWALSLA-KEYQPFEKLGFMQKLKMKIADKLVFTKWRE 329
Query: 123 AMGLDR-CRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSA--PDDFKLDG 179
+G + C VS G+AP+S L R F IP+ E +G+SE + +V+ + F +
Sbjct: 330 GVGGEVVCLVS--GSAPLSAHLSRIFWGAGIPVLEGYGLSETSPVISVNMMKKNSFGIGT 387
Query: 180 VGRTIPGTQTKIVDPDEEG----NGEICLKEYEANVRTVAKAF 218
VG + G K E+G G KEY + ++AF
Sbjct: 388 VGPVLKGIDVKF---GEDGEILVKGPNVFKEYYNDPEKTSEAF 427
>gi|313673782|ref|YP_004051893.1| amp-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940538|gb|ADR19730.1| AMP-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 627
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 8/224 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E +Y V VA F LGL++ ++ IIG N PEW S++ A G + G+Y +
Sbjct: 32 EYTWTDYFEKVTKVAIYFESLGLKKGDTIAIIGDNKPEWIISEIAAQLLGAYPIGIYQDS 91
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-----PDKPGVIS 315
+ L +++ + V ED +Q++K+L+ + P+LK I+ Y+ K D+ +
Sbjct: 92 ISSEVEYILTKAESKVVVAEDQEQVDKVLENVDKFPQLKKIIYYDSKGMYQYRDELLIFF 151
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
D ++ + D + L+ + N+ + TSGT G K MLSH N+ F A + +
Sbjct: 152 DDIFQQVSKTDLDSYFEEKLKLLNENDIAVMCTTSGTTGHPKLAMLSHKNMIFMATSLAK 211
Query: 376 YF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKN 418
K ES +SFLPL I Q + + S + T+ F + +
Sbjct: 212 ADPKYESDEF--VSFLPLPWIGEQMMSVASALIFGFTVNFPESH 253
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 74 LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLI-----LSKVKQAMGLDR 128
+ T KR+I N ++ A L+ + +P ++ ++++I K+K+ +G
Sbjct: 287 MDATPFKRFIYNLCLPIGYKY--AELKFDKKKPSFFQKIQYIIAYILLFRKLKERLGFSF 344
Query: 129 CRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQ 188
R +++G A + + ++F +L I + +++G +E AG + DD VG+ I GT+
Sbjct: 345 LRSAMTGGAALGPDTFKFFHALGIELKQIYGQTEIAGISCIHRSDDIDFTSVGKPIEGTE 404
Query: 189 TKIVDPDE 196
+I + E
Sbjct: 405 VRITEAGE 412
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY +D+ N + I +++KF L + GEL T KV+R F+++KYQ I
Sbjct: 533 EVYDLILKEVDKVNAQLIEK-HRVKKFVLLYKELDADDGELTRTRKVRRGFIIEKYQEIF 591
Query: 481 DKFY 484
+ Y
Sbjct: 592 NALY 595
>gi|414174858|ref|ZP_11429262.1| hypothetical protein HMPREF9695_02908 [Afipia broomeae ATCC 49717]
gi|410888687|gb|EKS36490.1| hypothetical protein HMPREF9695_02908 [Afipia broomeae ATCC 49717]
Length = 612
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+++ + +A A G + I+ P+W ++D+G + AGG ++G+Y T+S
Sbjct: 44 RQWLQTAKEIAYALHASGFKPGDVASIVSNATPQWVFADMGVLCAGGVSSGIYPTDSASQ 103
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDEL 319
+ + S + EDD+QL+K+L +A+CP L+ IV ++ G D P V+S DE
Sbjct: 104 VEYLINDSRTKVIFAEDDEQLDKVLACRARCPTLEKIVVFDMEGLSGFSD-PMVMSLDEF 162
Query: 320 MELGR--AAPDESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
LGR E+L ++++ N+ LVYTSGT G K M S+ ++T Y
Sbjct: 163 TALGRNHMQGREALWSEMIDSRGPNDLAILVYTSGTTGPPKGAMHSNRSVTHQMR-YADY 221
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ + + FLPL H+A + Y + V + + FA+
Sbjct: 222 LLVPTDHEERLVFLPLCHVAERIGGYYLSIAVGSIMNFAE 261
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLV----RWLILSKVKQAMGLDRCRVS 132
T +++W+ +A + Q Y + + P RL WL+ +++ +GLDR R++
Sbjct: 300 TPLQQWMYRHALAIG-QRLTDYRLEGETPPLHLRLAGKAAYWLVFRNIRRMLGLDRVRIA 358
Query: 133 LSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIV 192
+GAAPIS +L R++L++ + + EV+G +E G T+ D KL VG+ P + I
Sbjct: 359 FTGAAPISPDLIRWYLAIGLDMREVYGQTENCGVATLMPNDRIKLGSVGKAAPWGEVMIC 418
Query: 193 DPDEEGNGEICLK 205
GEI +K
Sbjct: 419 P-----KGEILIK 426
>gi|268317263|ref|YP_003290982.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262334797|gb|ACY48594.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 630
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 34/285 (11%)
Query: 165 GAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEE--------GNGE---ICLKEYEANVRT 213
G +AP D +G+T+P + + E G G I L+++
Sbjct: 2 GERIYTAPPDTGTPVLGKTLPDVLYEALARYENPAFLNQPAGPGRWTPISLRDFAEQAEA 61
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
+A +GLER V + + +D+ + G +Y T++PE+ + + ++
Sbjct: 62 LALGLHAMGLERGAHVAFYMESDAHFCLADMACLIGGLIDVPIYLTHAPESIHYVIEHAE 121
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIV----------QYEGKPDKPGVISWDELMELG 323
A VV + LE++ + P ++ +V + EG+P + ++ +L+E G
Sbjct: 122 ARALVVSNRALLERVAPLLRDLPGVQFVVVADATGLDTDRVEGRP----LYTFAQLLEAG 177
Query: 324 R---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA----ACIIQY 376
R AA E++ R+ I + T++YTSGT G K VMLSH+NI+FNA + I QY
Sbjct: 178 RQRRAADPEAIARLRAQIRPGDLATIIYTSGTTGRPKGVMLSHENISFNALTSFSGIKQY 237
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ +SFLPL+H+ A+T+ Y + A +++F +AL+
Sbjct: 238 RPGPDGEVA-LSFLPLTHVFARTL-FYGYLYYATSVYFTTPDALR 280
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K ++AMG R ++G A +S EL F + IPI + +G++E + T + P+
Sbjct: 350 LVYRKWREAMG-GRIAFIIAGGAALSAELANIFAAAGIPILQGYGLTETSPVITYNRPEL 408
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VG IPG + KI + +GEI +
Sbjct: 409 NRAGTVGVPIPGVEVKIAE-----DGEILTR 434
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ + Q +DRAN + + I++F +P SI G L PT+KV+R + KKY++ I
Sbjct: 553 KILEVYQQIVDRAN-EGMDPWATIKRFVLVPERLSIEEGTLTPTLKVRRSALYKKYEAQI 611
Query: 481 DKFY 484
Y
Sbjct: 612 RALY 615
>gi|387792271|ref|YP_006257336.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
gi|379655104|gb|AFD08160.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
Length = 588
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 6/211 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E+ NV ++ + LG+++ + + FN PEW + D I +Y T +
Sbjct: 38 EFTDNVNRLSSGLINLGIQKDDKIANMAFNRPEWNFVDYSIIQTNAIHIPLYPTLADHDI 97
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
L ++ + V + +KI ++++ P LK I Y+ D PG SW EL+
Sbjct: 98 KFILNDAEVKVIFVSGKELYDKINSLRSELPLLKEIYVYD---DVPGAKSWKELLVGQDE 154
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS 385
+ +++ T++ ++ T++YTSGT G K VML+H NI N + +Y E
Sbjct: 155 INWDEINKRKSTVSESDILTIIYTSGTTGTPKGVMLTHKNIVSNLKALREYIPQEVE--R 212
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPLSH+ + + Y + + ++++A+
Sbjct: 213 ALSFLPLSHVFERVAN-YLCLDIGISIYYAE 242
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 67 WKKVTYK-LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTY----RLVRWLILSKVK 121
+ K+T K + TG+K+ + +A + L++ E N + + Y +L LI SK +
Sbjct: 270 YDKITIKGSELTGIKKALFYWALNLGLRY-----ELNGANGWWYEMQLKLANKLIFSKWR 324
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDG 179
+A+G ++ +SG A + L + F+S I E +G++E + + D +K +
Sbjct: 325 EALG-GNVKLIVSGGAALQPRLAKVFMSAQITTLEGYGLTETSPVIAANHFDTRRYKFNT 383
Query: 180 VGRTIPGTQTKIVDPDE 196
VGR I G +I + E
Sbjct: 384 VGRPIGGVDVRIAEDGE 400
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++++KFE LP +++I GE+ P + +KR +V S+I+K Y
Sbjct: 542 EQVKKFELLPKEWTIEGGEMTPKLSLKRKVIVNNNLSLIEKIY 584
>gi|345302941|ref|YP_004824843.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345112174|gb|AEN73006.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 632
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 34/285 (11%)
Query: 165 GAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEE--------GNGE---ICLKEYEANVRT 213
G +AP D +G+T+P + + E G G I L+++
Sbjct: 2 GERIYTAPPDTGTPVLGKTLPDVLYEALARYENPAFLNQPAGPGRWTPISLRDFAEQAEA 61
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
+A +GLER V + + +D+ + G +Y T++PE+ + + ++
Sbjct: 62 LALGLHAMGLERGAHVAFYMESDAYFCLADMACLIGGLIDVPIYLTHAPESIHYVIEHAE 121
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIV----------QYEGKPDKPGVISWDELMELG 323
A VV + LE++ + P ++ +V + EG+P + ++ +L+E G
Sbjct: 122 ARALVVSNRALLERVASLLRDLPGVRFVVVADATGLDTDRVEGRP----LYTFAQLLEAG 177
Query: 324 R---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA----ACIIQY 376
R AA E++ R+ I + T++YTSGT G K VMLSH+NI+FNA + I QY
Sbjct: 178 RQRRAADPEAIARLRAQIRPGDLATIIYTSGTTGRPKGVMLSHENISFNALTSFSGIKQY 237
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ +SFLPL+H+ A+T+ Y + A +++F +AL+
Sbjct: 238 RPGPDGEVA-LSFLPLTHVFARTL-FYGYLYYATSVYFTTPDALR 280
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K ++A+G R ++G A +S EL F + IPI + +G++E + T + P+
Sbjct: 350 LVYRKWREALG-GRIAFIIAGGAALSAELANIFAAAGIPILQGYGLTETSPVITYNRPEL 408
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VG IPG + KI + +GEI +
Sbjct: 409 NRAGTVGVPIPGVEVKIAE-----DGEILTR 434
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ + Q +DRAN + + I++F +P SI G L PT+KV+R + KKY++ I
Sbjct: 553 KILEVYQQIVDRAN-EGMDPWATIKRFVLVPERLSIEEGTLTPTLKVRRSALYKKYEAQI 611
Query: 481 DKFY 484
Y
Sbjct: 612 RALY 615
>gi|325287445|ref|YP_004263235.1| long-chain-fatty-acid--CoA ligase [Cellulophaga lytica DSM 7489]
gi|324322899|gb|ADY30364.1| Long-chain-fatty-acid--CoA ligase [Cellulophaga lytica DSM 7489]
Length = 589
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 6/224 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+ +EY T+++A L+LG+ + + +I N EW D+G + G +Y T
Sbjct: 35 MSTQEYVDKANTMSRALLRLGVSKNDKIAVISSTNRMEWNVMDIGILQLGAQNVPVYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E + L S+A C + EKI K+K Q P L I ++ G +W E++
Sbjct: 95 SEEDYAYVLNHSEAKYCFISCTDVFEKIKKIKDQVPSLIEIYSFDSLE---GCKNWSEVL 151
Query: 321 ELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+LG +++ ++++ + + + TL+YTSGT G K VMLSH+N+ NA + +
Sbjct: 152 DLGIDESNQAEVEKLKDDVKPTDLATLIYTSGTTGRPKGVMLSHNNLVSNALESFKRIPI 211
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVY 423
E +SFLPL H+ + + IY A + +A + + Y
Sbjct: 212 ELGKSRALSFLPLCHVYERML-IYLYQYCGAAIHYAPIDQISEY 254
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + +A L+ Y Y + L R LI SK K A+G + V SG+
Sbjct: 285 TGIKKKLFFWAVEVGLE-YKPYQQNGWWYEKKLGLARKLIFSKWKAALG-GQVAVMASGS 342
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDP 194
A + L R F + + E +G++E + +V+ + F++ VG+ + T+ KI +
Sbjct: 343 AALQPRLARVFNAAGFGVMEGYGLTETSPVISVNDMRNGGFRIGTVGKPLERTEVKIAE- 401
Query: 195 DEEGNGEICLK 205
+GEIC+K
Sbjct: 402 ----DGEICIK 408
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV Q +D AN ++ + +KI++F P +SI G + PT+K++R + +KY+++
Sbjct: 525 KVIARFQEEVDAAN-ENFAKWEKIKQFRLTPDVWSIEGGHVTPTLKLRRKIIKEKYKALY 583
Query: 481 DKFY 484
+ Y
Sbjct: 584 NDIY 587
>gi|414172597|ref|ZP_11427508.1| hypothetical protein HMPREF9695_01154 [Afipia broomeae ATCC 49717]
gi|410894272|gb|EKS42062.1| hypothetical protein HMPREF9695_01154 [Afipia broomeae ATCC 49717]
Length = 600
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 12/221 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
K+Y A V F LGL V I+ N EW + LGA G A G+Y T+
Sbjct: 41 KDYYARACHVGLGFRALGLSSGGHVAILSENRIEWVLAQLGANIVDGVAVGVYPTSPANE 100
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK------PDKPGVISWDE 318
+ L S++ I V ED +Q++K+L+ + + PKL++I+ E K PD+ V+S++
Sbjct: 101 VAYVLAHSESEIIVCEDQEQVDKVLERRDELPKLRSIIVLETKGIRDYPPDQ--VMSFEA 158
Query: 319 LMELG---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
L LG A+ D +++ ++ ++YTSG+ G K MLS+ NI A +
Sbjct: 159 LEALGVEFEASHAGLTDGIVDRQQLSQIGLVIYTSGSTGKPKGAMLSYKNIRAQAIASVD 218
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L+++ S++S+LPL H+A Q + + + + + F +
Sbjct: 219 RLNLDTSE-SLLSYLPLCHVAEQMTTVMVPVYLGSLVNFGE 258
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 98 YLEKNV-----SEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDI 152
+ EKNV SE T+ + WLI ++ +GL + R++++GAAPIS + +F +L +
Sbjct: 314 FAEKNVASRTFSERITFAICYWLIFRALQNFIGLRKTRIAMTGAAPISPSIVHFFRTLGV 373
Query: 153 PICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
P+ EV+G++E +G D ++ VG I + K+ D +E
Sbjct: 374 PLVEVYGLTESSGIALGQMLSDRRVGTVGPGIAHMEAKLGDSNE 417
>gi|126663959|ref|ZP_01734953.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Flavobacteria bacterium BAL38]
gi|126623908|gb|EAZ94602.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Flavobacteria bacterium BAL38]
Length = 591
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 8/215 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY +++ L+LG+ + + II N EW +D+G + G MY T S E
Sbjct: 38 QEYLDKANAISRGLLRLGVNKNDKIAIISSNNRTEWHITDIGVLQTGAQTVPMYPTISAE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S++ V D + EK+ +K+ P LK + Y D G SW E++ELG
Sbjct: 98 DYEYILNHSESQYVFVSDLEVYEKLQSIKSNVPLLKEVYCYN---DIAGCKSWKEVLELG 154
Query: 324 RAAPDESL--DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
++ + DR + T + T++YTSGT G K VMLSH NI + L +
Sbjct: 155 ANTDNQDVVEDRK-NNVLTTDLATIIYTSGTTGRPKGVMLSHQNIVSDVLMSAPRVPLRA 213
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ HI + + Y +++FA+
Sbjct: 214 GSTRALSFLPICHIFERML-TYLYQYYGISIYFAE 247
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V Q ID N K N +K+++FE P +SI G L PTMK+KR + +KY +
Sbjct: 529 VINRIQEEIDHCNEK-FGNWEKVKRFELTPDVWSIVDGHLTPTMKLKRKIIKEKYAVLYQ 587
Query: 482 KFY 484
K Y
Sbjct: 588 KIY 590
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + +A ++ Y Y + + ++ R LI SK Q + +SG+
Sbjct: 286 TGIKKALFFWALDLGME-YKPYKQNGAFYEFKLKIARKLIFSKW-QEGLGGELELLVSGS 343
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDP 194
A + + L + F + +IP+ E +G++E + +V+ + F++ VG+ + G + KI +
Sbjct: 344 AALQSRLTKVFCAANIPVMEGYGLTETSPVISVNDMRNGGFRVGSVGKVLDGVEVKIAE- 402
Query: 195 DEEGNGEICLK 205
+GEI K
Sbjct: 403 ----DGEILCK 409
>gi|268316194|ref|YP_003289913.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262333728|gb|ACY47525.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 633
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 12/243 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I +E E +V +A K G+ V I+ N PEW +DL GG +YT+
Sbjct: 41 DITWEELEQHVHAMAGYLHKRGVRPGDRVAILSENRPEWAITDLATQILGGVNVALYTSL 100
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDKPGVI-SWDE 318
+ + S A I VV QL K + +CP+L+ IV E + D P + +WD+
Sbjct: 101 PASQVGYIVKDSGARILVVSSAVQLRKAETIFDECPELQEIVTLSEMRKDHPPYVRAWDD 160
Query: 319 LMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
+M G A + L ++ E + ++ L+YTSGT G K VML+H N N +Q
Sbjct: 161 VMAEGAAYWAEHEAELSKLAEQVQPDDLSALIYTSGTTGLPKGVMLTHRNFCSNVQAALQ 220
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNALKVYKATQAA 429
A +SFLPL H +T +V+ A + +A+ +N L+V +
Sbjct: 221 RVDFGPADHH-LSFLPLCHSFERTAGYTAVLACGARISYAESIEALSQNLLEVRPTVMIS 279
Query: 430 IDR 432
+ R
Sbjct: 280 VPR 282
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ K+ +G R ++SG A + + +FL++ + I E +G++E A T
Sbjct: 334 HRLAHRLVFQKLHDRLG-GNLRFAVSGGAALPRHIGEFFLAIGLTIIEGYGLTETAPVLT 392
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ PD + VG +PG I
Sbjct: 393 VNPPDRPRFGTVGWVLPGVTIAI 415
>gi|330826789|ref|YP_004390092.1| long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
gi|329312161|gb|AEB86576.1| Long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
Length = 599
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 9/223 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +Y + L+LGL V +I N EW + +GA AGG G+Y T+
Sbjct: 36 VTWAQYYERAAHFGQGLLQLGLPAGGHVGVIAENRIEWVLAQMGAGLAGGITVGVYPTSP 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK------PDKPGVI- 314
+ + +D +I V ED +Q +K+L+ Q P+LK I+ E K P+ +I
Sbjct: 96 TAEVAYVVGHADIDIMVCEDQEQTDKVLEALDQLPRLKKIIVMETKGLRSFAPEHRALIT 155
Query: 315 SWDELMELGRAAPDESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
++DE+ LG ++L D +L ++ ++YTSG+ G K M+S N+ + I
Sbjct: 156 TFDEVERLGAGVHSQALIDELLARQKLDDVGLMIYTSGSTGKPKGAMISWRNMRGVSPGI 215
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
I+ +L+ A + +S+LPL H+A Q + + + + +T+ F +
Sbjct: 216 IERLRLD-AHTTHLSYLPLCHVAEQMLTTFCPVYLGSTVNFGE 257
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 67 WKK----VTYKLQTTG------VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLI 116
W+K +T K+Q TG +R +A A H L + + Y WL+
Sbjct: 281 WEKLHSAITIKMQETGPLRRHLFQRAMAACAPLAEKPHGQWTLGERLRHALHY----WLV 336
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L ++ +GL RV+L+GAAPI+ ++ R+F +L +P+ EV+G++E G T D
Sbjct: 337 LRALQNFIGLRDARVALTGAAPIAPDVVRFFRTLGVPLIEVYGLTESTGMVTGHDLDHVS 396
Query: 177 LDGVGRTIPGTQTKIVDPDE-EGNGEICLKEY----EANVRTVAKAFLKLG 222
+ VG G + ++ D E + GE+ Y EA ++ +L G
Sbjct: 397 VGTVGPVTEGVEYRVADNGELQIRGEMVFAGYYKNPEATATSIVDGWLHTG 447
>gi|84687016|ref|ZP_01014899.1| AMP-binding enzyme [Maritimibacter alkaliphilus HTCC2654]
gi|84664990|gb|EAQ11471.1| AMP-binding enzyme [Rhodobacterales bacterium HTCC2654]
Length = 605
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y + + A + LG+++ V I+ + EW Y DL A G AG+YTT+S
Sbjct: 49 RDYYETTKKIGLALMDLGVQKGEPVLILAEDRREWIYCDLAAASIGAIPAGVYTTDSAGQ 108
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EG----KPDKPGVISWDE 318
+ S A + VE+D+QL+K L+ + P ++ ++ + EG + DK V+ DE
Sbjct: 109 LAYLANDSGARVLFVENDEQLDKWLQARGDMPGIEHVIVFDREGLATFRNDK--VMFLDE 166
Query: 319 LMEL-GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
L+E+ G+AA + L+ + + L+YTSGT G K +L+H N+ + Q
Sbjct: 167 LIEMGGKAADPNRFETALDAVKPEDPRMLIYTSGTTGPPKGAILTHRNMVYQLVAGEQML 226
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ + FLPL H+ + V + + + T+ FA+
Sbjct: 227 DFHETD-NQLCFLPLCHVLERLVSVDAPIANGCTVNFAE 264
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 110 RLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
++ WL +L +++ +GL R SGAAPIS +L +F +L +P+ E FGM+E G
Sbjct: 331 KVAHWLAQVTVLRNLRRMLGLGNARRVTSGAAPISPDLIDWFWALGVPLVEGFGMTETGG 390
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
TV+ DD + VG+ +PG + ++ D E G C+
Sbjct: 391 VATVNTVDDNTIGTVGKPLPGVELRLADTGELLVGGPCV 429
>gi|408370751|ref|ZP_11168525.1| long-chain-fatty-acid--CoA ligase [Galbibacter sp. ck-I2-15]
gi|407743743|gb|EKF55316.1| long-chain-fatty-acid--CoA ligase [Galbibacter sp. ck-I2-15]
Length = 590
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTN 260
I + Y +++ L+LG+ + II N + +W +D+G + G +Y T
Sbjct: 35 ISSQNYVDRANQLSRGLLRLGVHPNDKIAIISHNNSADWNIADIGILQTGAHNVPIYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L+ L SDA C+V D + LEK+ +K + LK + + D GV S E+
Sbjct: 95 SAEDYLYILNHSDAKYCIVSDMEILEKLNSIKDKVTSLKEVYSFR---DLDGVKSLSEVY 151
Query: 321 ELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
LG+ ++ + ++ ++ ++ TL+YTSGT G K VMLSH+NI N + L
Sbjct: 152 NLGKDQSNQQEVQSRMDAVSPDDLATLIYTSGTTGKPKAVMLSHNNIVSNVLGSEERVPL 211
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
S +SFLP+ HI + V +Y ++ FA+
Sbjct: 212 -SEGDKALSFLPICHIFERMV-VYLYQYCGISIHFAE 246
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ ++ R LI SK ++ +G ++ +SG+A + L R F + DIP+ E +G++E +
Sbjct: 314 FKLKIARKLIFSKWQEGLG-GNLKILVSGSAALQPRLARIFGAADIPVMEGYGLTETSPV 372
Query: 167 HTVSAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V+ ++ +K+ VGR +P + KI + +GEI K
Sbjct: 373 IAVNDQNNRGWKIGTVGRMLPNVEVKIAE-----DGEILCK 408
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + + + + N K ++++KFE P ++++ G L PT+K+KR + +KY +
Sbjct: 525 KVIERIEKEVAKYN-KQFGRWEQVKKFELTPDEWTVEDGHLTPTLKLKRRIIKEKYMDLY 583
Query: 481 DKFY 484
Y
Sbjct: 584 KSMY 587
>gi|260063224|ref|YP_003196304.1| long chain fatty-acid CoA ligase [Robiginitalea biformata HTCC2501]
gi|88783318|gb|EAR14490.1| probable long chain fatty-acid CoA ligase [Robiginitalea biformata
HTCC2501]
Length = 589
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 7/217 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTN 260
I +EY V++A L+LG+ + +I N EW D G + G +Y T
Sbjct: 35 ISSQEYVDRANAVSRALLRLGVSAGDKIALISMTNRTEWNIMDTGILQVGAQDVPIYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E + L S + C+V + EK+ ++ + PKLK + ++ PD +W EL+
Sbjct: 95 SEEDYAYILNHSGCSYCLVSCQEVYEKVAAIRGKVPKLKEVYSFDKLPD---CKNWQELL 151
Query: 321 ELG-RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+LG + ++ + + TL+YTSGT G K VMLSHDNI N +
Sbjct: 152 DLGADTGNQDEVEARKAAVQPGDLATLIYTSGTTGKPKGVMLSHDNIVSNVIASDRRVPF 211
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
E A S +SFLP+ HI + + +Y +++FA+
Sbjct: 212 EHGA-SALSFLPVCHIFERMI-LYLYQYCGISVYFAE 246
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + Q +D+AN + + +++++F P +S+ G L PTMK+KR ++++Y+ +
Sbjct: 525 KVLERYQEEVDKAN-EDFARWERVKQFRLTPNTWSVEAGHLTPTMKIKRKAILEQYRELY 583
Query: 481 DKFY 484
D Y
Sbjct: 584 DDIY 587
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L R LI SK ++A+G +SG+A + L R F + IP+ E +G++E + +V+
Sbjct: 318 LARKLIFSKWQEALG-GNLETMVSGSAALQIRLARIFAAAGIPVMEGYGLTETSPVISVN 376
Query: 171 APDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ +K+ VGR I + +I + +GEI K
Sbjct: 377 DQRNSGWKIGTVGRVIDEVEVRIAE-----DGEILCK 408
>gi|226356410|ref|YP_002786150.1| long-chain-fatty-acid--CoA ligase [Deinococcus deserti VCD115]
gi|226318400|gb|ACO46396.1| putative Long-chain-fatty-acid--CoA ligase [Deinococcus deserti
VCD115]
Length = 666
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 18/221 (8%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y R VA LG+ R V II N P W ++++GA G + G+Y ++
Sbjct: 57 YLQRSREVAAGLHALGVRRGDKVAIIAENIPAWVFTEIGAQALGAISVGVYQSSVAAEVR 116
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV---------ISWD 317
+ + +DA + + ED++Q++K+L+ + + PK++ ++ YE D G+ +S++
Sbjct: 117 YVVDYTDAVVVLAEDEEQVDKLLEHRDELPKVRKVI-YE---DPRGMSKHAHDSWFMSFE 172
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI--IQ 375
EL+ELGR P + + ++ C TSGT G K MLSH N+ + + ++
Sbjct: 173 ELLELGRQQPGDIFGQEAALGHPDDVCHFSLTSGTTGQPKAAMLSHRNLLYMGQSLGRVE 232
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
FK S +SFLP++ I Q + I ++ T+ F +
Sbjct: 233 GFKPGS---DYLSFLPMAWIGEQMMTIAVALSNGITVNFPE 270
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 114 WLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPD 173
W + + +G R + +G A + ++ R++ L + + +++G +E G V
Sbjct: 349 WGLTRPLLDQLGFLRLTHAYTGGAALGPDVFRFYHGLGVNLKQIYGQTENIGIAYVHRDG 408
Query: 174 DFKLDGVGRTIPGTQTKIVDPDE--EGNGEICLKEY---EANVRTVAKAFLKLG 222
D + D VG+ +PG + +I E + +C Y EA T+ +L G
Sbjct: 409 DVRFDTVGKILPGGEVRITPEGEILSRSPAVCQGYYKKPEATAETIRDGWLHSG 462
>gi|418688201|ref|ZP_13249357.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739660|ref|ZP_13296041.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410737058|gb|EKQ81800.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752782|gb|EKR09754.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 682
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 41 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVSRGTDITDSEIV 99
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 100 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELLEKGKSL 159
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 160 RAGGSKKAEERIAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGA 219
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 220 -RLLSILPIWHVFERVVEYVCIGLGAATYY 248
>gi|260893445|ref|YP_003239542.1| AMP-dependent synthetase and ligase [Ammonifex degensii KC4]
gi|260865586|gb|ACX52692.1| AMP-dependent synthetase and ligase [Ammonifex degensii KC4]
Length = 633
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 20/246 (8%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +EY +VR LG +R + IIG N PEW Y++L A AGG A G+Y +
Sbjct: 34 ITWEEYLDHVRRFCLGLCALGFKRGDKLAIIGDNRPEWVYAELAAQAAGGVAVGIYQDSL 93
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISWD 317
P + + SDA V ED +Q++K+L+VK + P L+ ++ YE + + P ++S+
Sbjct: 94 PREVAYIVRHSDARFVVAEDQEQVDKLLEVKEELPHLEKVIYYEPRGLRNYRDPLLLSFP 153
Query: 318 EL----MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
E+ EL +A P + V E ++ + YTSGT G K ML+H N+ A +
Sbjct: 154 EVEKMGEELAKARPGLFEEMVAEG-KGDDLAVIAYTSGTTGPPKGAMLTHRNMLSMARNL 212
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRA 433
+ LE +SFLPL+ + Q +MTV++ LW V + R
Sbjct: 213 MAVDPLEPGD-EYLSFLPLAWMGEQ------MMTVSSALWV----GFTVNFPEETDTVRE 261
Query: 434 NLKSIS 439
NL+ I
Sbjct: 262 NLREIG 267
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L +LI S +K +G R R + +G A + ++ R+F ++ + + +++G +E AG V
Sbjct: 330 LGEFLIFSAIKDHLGFCRLRRAYTGGAALGPDVFRFFHAIGVNLKQIYGQTEIAGISVVH 389
Query: 171 APDDFKLDGVGRTIPGTQTKI 191
D K VG+ +P T+ +I
Sbjct: 390 RDGDIKFHTVGKPLPETEIRI 410
>gi|219849300|ref|YP_002463733.1| AMP-dependent synthetase and ligase [Chloroflexus aggregans DSM
9485]
gi|219543559|gb|ACL25297.1| AMP-dependent synthetase and ligase [Chloroflexus aggregans DSM
9485]
Length = 649
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 8/222 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +++ +VR A LG+ R V IIG N PEW Y++ A G + G+Y +
Sbjct: 37 VTWRQFAEHVRAFAMGLHALGVRRGDVVAIIGDNRPEWLYAEFAAQAIGAMSIGVYQDSV 96
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWD 317
E + + ++A + VVED +Q++K++++ + + ++ YE K +P + +
Sbjct: 97 AEEVYYVVSAAEARVIVVEDQEQVDKVIEIWPRLSGVLKVIYYESKGMRNYRQPYLAHFP 156
Query: 318 ELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
++ ELGRA E D L ++ L TSGT G K ML+H N+ A ++
Sbjct: 157 DIEELGRAYDREHPGLFDAELAAGKPDDVAILSTTSGTTGKPKLAMLTHRNLISQGAGLL 216
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +SFLPL+ + Q V + + M T+ F +
Sbjct: 217 SVDPL-GPDDEFVSFLPLAWVGEQMVTVAAGMQCGFTINFPE 257
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L R L+ +K +GL + + +G A + ++ R++ ++ + + +V+G +E AG
Sbjct: 331 YGLARLLVFEMLKDHLGLRFLKRAYTGGAALGPDVFRFYHAIGVNLKQVYGQTESAGLSV 390
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ K VG +P T+ +I + NGEI +K
Sbjct: 391 IHRDGQIKFQTVGTPLPNTEIRIAE-----NGEILVK 422
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY + ++RAN + A +I++F L + GEL T KV+R + ++YQ I+
Sbjct: 539 QVYALIRKDVERAN-ADLPPAARIRRFLLLHKELDADDGELTRTRKVRRRLIAQRYQEIV 597
Query: 481 DKFY 484
D Y
Sbjct: 598 DALY 601
>gi|392411218|ref|YP_006447825.1| AMP-forming long-chain acyl-CoA synthetase [Desulfomonile tiedjei
DSM 6799]
gi|390624354|gb|AFM25561.1| AMP-forming long-chain acyl-CoA synthetase [Desulfomonile tiedjei
DSM 6799]
Length = 652
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 8/223 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ ++Y NV+ + ++LGLE V +IG N PE ++++ A+ GG ++
Sbjct: 50 VTWRQYLENVKEITLGLIELGLESGDKVIMIGDNRPEALWTEMAAMCGGGIGVWLFQDCL 109
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWD 317
+ + + SD+ V E ++++K L ++ QCPKLK I+ + K D P +IS D
Sbjct: 110 MDEVQYIVDHSDSKFYVAEGQEEVDKALAIRDQCPKLKKIIWDDPKGMRHYDDPMLISLD 169
Query: 318 ELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
E+ ELGR E ++++ + C L YTSGT K +L+H N+ ++
Sbjct: 170 EVRELGRKKDKEDPGLFEKLVSRGKGQDVCLLFYTSGTTSVPKGALLTHYNMLTMGRNLM 229
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ + + +S+LP + I Q + I + + T+ F ++
Sbjct: 230 RVDPC-TPSDDFVSYLPFAWIGEQMMSISCGLQIGFTINFPEE 271
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
K++ +GL R + +G A + + R+F ++ + + +++G +E AG V D K D
Sbjct: 354 KIRDHLGLSHIRHAYTGGAAMGPDHFRFFHAIGVNLKQIYGQTEIAGISVVHRDGDIKFD 413
Query: 179 GVGRTIPGTQTKIVDPDE 196
VG IP T+ KI + DE
Sbjct: 414 TVGTPIPETEVKITETDE 431
>gi|261337359|ref|ZP_05965243.1| putative CoA ligase [Bifidobacterium gallicum DSM 20093]
gi|270277737|gb|EFA23591.1| putative CoA ligase [Bifidobacterium gallicum DSM 20093]
Length = 687
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
++R VAK L GL+R SV + EW D + GG A +Y T+S E
Sbjct: 130 DIRAVAKGLLHYGLKRGDSVAFMCRTCYEWDVFDAAVLSIGGVLATIYDTDSAEQIRDIC 189
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDE 329
SDA + VV+ D+ K K +CPKL+ ++ +E + DEL G D
Sbjct: 190 QNSDARLLVVQTDEMKAKTPKAVEECPKLERVMNFENG-------ALDELKAYGAGVSDA 242
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESAALSVI 387
LD+ + ++ N+ C++VYTSG+ A K V ++H+ A + Y L + V+
Sbjct: 243 DLDKRIASVKRNDLCSIVYTSGSTAAPKGVEITHEQFCATAVNLPPYMPDLLFNKKHRVL 302
Query: 388 SFLPLSHIAAQTVDIYSVMT 407
FLP +H+ A+ ++ V +
Sbjct: 303 LFLPQAHVFARAINYICVAS 322
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N V Q +D+AN + +S A+ ++KF +P +FS G + +MK+ RP V+++Y
Sbjct: 609 NNAAVRAEVQTWVDKAN-EGVSRAESVRKFIIVPEEFSQENGLMTASMKIIRPKVLQRYT 667
Query: 478 SIID 481
++++
Sbjct: 668 NLLN 671
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA---HTVSA 171
+I ++++ +G + ++G AP+ EL +F +P+ E +G +E + +S
Sbjct: 408 VIYKQIREVLG-GHAQWFVTGGAPLDPELMAFFRGAGVPVYEGYGCTETTAPCAFNPLSV 466
Query: 172 PDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAF 218
P + VG PG Q +I D +E + G+ K Y N +F
Sbjct: 467 P--YHEGSVGIPFPGFQVRIGDGNEIQVKGDSVFKRYHKNEEATESSF 512
>gi|90411921|ref|ZP_01219929.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
gi|90327179|gb|EAS43551.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
Length = 604
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E+ ++ +A A L G+ V I N P W +D A+Y +Y TN
Sbjct: 35 DITWNEFGEQIQQLAIAMLAHGMNVQDKVAIFSNNMPRWTVTDFAALYNRCVIVPIYPTN 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+P+ + L +D I V + QL+ + + CP L+ I+ PD V S++
Sbjct: 95 TPQQAAYVLNDADVRILFVGEQAQLDAAIGIAEGCPNLERIITLSDDLVLPDNSLVCSFN 154
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ + + L + L A ++ TL+YTSGT G K VML + NI Q
Sbjct: 155 DFLCTATPELEAELQQRLNDTAMDDLLTLIYTSGTTGTPKGVMLDYANIAAQLVGHDQNL 214
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L+ S + FLPLSH+ + Y + A + D N LK
Sbjct: 215 SLDEGDTS-LCFLPLSHVFERAWTFYVLHRGAINHYLTDTNQLK 257
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
++ L ++LSK++ +G + G A + + R+F ++ I + +GM+E
Sbjct: 324 SHNLANKVVLSKLRDILG-GNIKFMPCGGAKLDESIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G +PG + KI + +E G + ++ Y AK F + G
Sbjct: 381 TVSCWDDQCFNPDSIGMAMPGAEIKIGENNEILVRGPMVMRGYYNMPEETAKNFTEDGF 439
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++K LP FS+ GEL PT K++R + +Y I++ Y+
Sbjct: 547 KDLARFEQVKKITLLPKAFSMDKGELTPTQKLRRKVIHDRYHQEIERMYE 596
>gi|365092757|ref|ZP_09329840.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
gi|363415184|gb|EHL22316.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
Length = 622
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+ Y R A LG ++ + I ++P+W ++DL GG G+Y TN
Sbjct: 47 QHYFETARRFALGLKSLGFDKGDRLAIASEDSPQWMFTDLATQAIGGVVVGIYPTNPWPE 106
Query: 265 CLHCLVTSDANICVVEDDKQLEKILK------------VKAQCPKLKAIVQYEGKPDKPG 312
+ + S++ V D +Q++K+L VK C +K + Y K DK
Sbjct: 107 LQYIVHHSNSKFVVCGDQEQVDKVLDAMDKHATGLPDLVKIICVDMKGMRGY--KHDK-- 162
Query: 313 VISWDELMELGR----AAPDE--SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI 366
++S+++++ELG A+P + DR +E ++ C LVYTSGT G K MLSH N+
Sbjct: 163 LMSFEDVLELGDQYAAASPQHAGTFDRAIEDTQPDDTCMLVYTSGTTGPPKGAMLSHRNL 222
Query: 367 TFNAACIIQYFKLESAALSVISFLPLSHIAAQ 398
+ +FKL+ V+ +LPL H+A +
Sbjct: 223 IVTVDKLKTHFKLDRHNYEVVCYLPLCHVAER 254
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 100 EKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFG 159
++++S+ + ++ L+ +++ +G DR + G A +S E+ ++F L IP+ +V+G
Sbjct: 338 QRSLSDRLHFFVLWLLMFRNLQKFVGQDRMQCGFCGGASVSPEVLKFFRILGIPVYQVYG 397
Query: 160 MSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKE 206
M+E G KL G I G KI + +GE+ +K
Sbjct: 398 MTESGGVIFFQHEKAIKLGATGLPIDGLNWKIAE-----DGELVVKH 439
>gi|326332816|ref|ZP_08199074.1| AMP-binding family protein [Nocardioidaceae bacterium Broad-1]
gi|325949374|gb|EGD41456.1| AMP-binding family protein [Nocardioidaceae bacterium Broad-1]
Length = 617
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
D G + E R +A A++K GL+ SV I+ N E +DL A+ AGG
Sbjct: 44 DGTGWRTLTWAELHQRARELAAAYVKAGLQPGESVAIMAANRIEHIVADLAAVLAGGVPI 103
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T +P+ + ++ I V+E D + + + L+ + PD P +
Sbjct: 104 SIYNTLAPDQVGYVAEHANPRIVVLETDDHVARWALGLKREEILRVVTVDTAVPDDPRAV 163
Query: 315 SWDELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
SWD+ + G A E LD + + T++YTSGT G K V+L+H NI F
Sbjct: 164 SWDDFVASGAEALAEVGEELDARSAAVTPEDTVTMLYTSGTTGQPKGVVLTHRNIVFETT 223
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
+ +E + ++S+LP +HIA + + +Y
Sbjct: 224 SSLSTSGIEEPGI-LVSYLPFAHIAERVLSLY 254
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+LS ++ +GLD+ + S AAP+ E+ ++F L I + +V+GM+E GA T + PD F
Sbjct: 349 VLSTMRALLGLDKVEWAASAAAPMPLEVAKFFAGLGIKVYDVYGMTETTGAATANGPDGF 408
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+L VGR PG + +I + +GEI +
Sbjct: 409 RLGTVGRPHPGIEVRIAE-----DGEILFR 433
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+ A A++ AN + +S ++++ FE L +++ + EL PT+K+KR V KKY IID
Sbjct: 552 IRGAVGQAVEAANAR-LSRPEQVKAFELLGEEWTAESEELTPTLKLKRRVVSKKYADIID 610
Query: 482 KFY 484
Y
Sbjct: 611 GLY 613
>gi|148654790|ref|YP_001274995.1| AMP-dependent synthetase and ligase [Roseiflexus sp. RS-1]
gi|148566900|gb|ABQ89045.1| AMP-dependent synthetase and ligase [Roseiflexus sp. RS-1]
Length = 647
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 8/220 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +++ +VR A LG+ER V IIG N PEW Y++L A GG + G+Y +
Sbjct: 34 VTWRQFADHVRAFAMGLRALGVERGDKVAIIGDNRPEWLYAELAAQAIGGASIGIYQDSV 93
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWD 317
E + + SDA + V ED +Q++KI+++ + + ++ YE K +P + +
Sbjct: 94 AEEVRYLVEASDARVIVAEDQEQVDKIIEIWSHLRGVLKVIYYEPKGLRSYREPYLAGFP 153
Query: 318 ELMELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
++ ELGRA + +A ++ L TSGT G K ML+H N+ A ++
Sbjct: 154 DIEELGRAFDRKHPGLFEAEVAQGHPDDIAILSTTSGTTGKPKLAMLTHRNLISQGAGLL 213
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWF 414
L +SFLPL+ + Q + + + + T+ F
Sbjct: 214 AVDPL-GPDDEFVSFLPLAWVGEQMITVAAGLQCGLTINF 252
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L R ++ ++K +GL + + +G A + ++ R++ ++ + + +V+G +E AG
Sbjct: 328 YALARLIVFEELKDHLGLRFIKRAYTGGAALGPDVFRFYHAIGVNLKQVYGQTESAGLSV 387
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ K VG +P T+ +I NGEI +K
Sbjct: 388 IHRDGQIKFQTVGTPLPNTEVRIA-----ANGEILVK 419
>gi|311742147|ref|ZP_07715957.1| AMP-binding family protein [Aeromicrobium marinum DSM 15272]
gi|311314640|gb|EFQ84547.1| AMP-binding family protein [Aeromicrobium marinum DSM 15272]
Length = 623
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Query: 212 RTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVT 271
R + A++ G+ +V I+ + E +DLGA++AG +Y T +PE +
Sbjct: 71 RELGAAYVAAGVRPGDTVAIMASSRTEHVLADLGAVHAGATPMSVYATLAPEQVAYVAGH 130
Query: 272 SDANICVVEDDKQLEKILKVKAQCPK-LKAIVQYEGK-PDKPGVISWDELMELGRAAPDE 329
S + V+E QLE+ A+ P+ L+ +V EG PD W E G A
Sbjct: 131 STPVVVVLEGADQLERWSTALAERPEILRIVVMDEGAVPDDDRATGWAEFEASGSPADLA 190
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISF 389
+DR +E I ++ T++YTSGT G K V+L+H I F ++ +LE S IS+
Sbjct: 191 EVDRRIEGITADDPLTILYTSGTTGNPKGVVLTHGGILFEVVSSLRTGELEGTGTS-ISY 249
Query: 390 LPLSHIAAQTVDIY 403
LP +HIA + + +Y
Sbjct: 250 LPFAHIAERVLGMY 263
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L+ ++ A+GLDR + S AAP+ ++ ++F L + I +V+GM+E G+ T + P F
Sbjct: 358 VLTHLRAALGLDRVEWAASAAAPMPVDVAKFFAGLGLRIFDVYGMTETTGSATSNGPGSF 417
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+L VGR + G + +I D +GEIC++
Sbjct: 418 RLGTVGRPLAGVEARIAD-----DGEICVR 442
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V A A++ AN + +S ++++ FE L +++ + EL PT+K+KR VV KY +ID
Sbjct: 561 VRAAVGQAVEAANAR-LSRPEQVKAFELLSQEWTAESEELTPTLKLKRRVVVSKYADVID 619
Query: 482 KFY 484
+ Y
Sbjct: 620 RLY 622
>gi|345304087|ref|YP_004825989.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113320|gb|AEN74152.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 633
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 12/243 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I +E E +V +A K G+ V I+ N PEW +DL GG +YT+
Sbjct: 41 DITWEELEQHVHAMAGYLHKRGVRSGDRVAILSENRPEWAITDLATQILGGVNVALYTSL 100
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDKPGVI-SWDE 318
+ + S A I VV QL K + +CP+L+ IV E + D P + +WD+
Sbjct: 101 PASQVGYIVRDSGARILVVSSAVQLRKAETIFDECPELQEIVTLSEMRKDHPPYVRAWDD 160
Query: 319 LMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
++ G A + L ++ E + ++ L+YTSGT G K VML+H N N +Q
Sbjct: 161 VLAEGAAYWAEHEAELSKLAEQVQPDDLSALIYTSGTTGLPKGVMLTHRNFCANVQAALQ 220
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNALKVYKATQAA 429
A +SFLPL H +T +V+ A + +A+ +N L+V +
Sbjct: 221 RVDFGPADHH-LSFLPLCHSFERTAGYTAVLACGARISYAESIEALSQNLLEVRPTVMIS 279
Query: 430 IDR 432
+ R
Sbjct: 280 VPR 282
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ K+ +G R ++SG A + + +FL++ + I E +G++E A T
Sbjct: 334 HRLAHRLVFQKLHDRLG-GNLRFAVSGGAALPRHIGEFFLAIGLTIIEGYGLTETAPVLT 392
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ PD + VG +PG I
Sbjct: 393 VNPPDRPRFGTVGWVLPGVTIAI 415
>gi|384440079|ref|YP_005654803.1| AMP-dependent synthetase and ligase [Thermus sp. CCB_US3_UF1]
gi|359291212|gb|AEV16729.1| AMP-dependent synthetase and ligase [Thermus sp. CCB_US3_UF1]
Length = 644
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 8/214 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI EY V A L LG + II N PEW Y++LGA G + G+Y ++
Sbjct: 42 EITYAEYYEKVLLFAHGLLSLGFAPGERLAIIADNIPEWLYAELGAQAVRGISVGVYQSS 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISW 316
P + L + A+I V ED +Q++K+ +++ + P+++ ++ + K + P ++S+
Sbjct: 102 LPAEIAYMLTYTGASIVVAEDQEQVDKLYEIRNEIPQVRHVIYEDPKGMRGYRDPWLLSF 161
Query: 317 DELMELGRAAPD---ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+E++E GR E+++++L + + E C L TSGT G K ML H N+ +
Sbjct: 162 EEVLERGREHRRRHPEAVEKLLLSASPEEVCHLSSTSGTTGRPKAAMLRHRNLIHMGVAL 221
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
+ L +SFLPL+ I Q + + +T
Sbjct: 222 QEVDPLLPTD-DYLSFLPLAWIGEQMMSVAMALT 254
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 106 PYTYRLVRWL----ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P RL WL + ++ +G R R + +G A + ++ R+F ++ + + +++G +
Sbjct: 330 PLGLRLAYWLADQVLFKPLRDQLGFLRLRRAYTGGAALGPDVFRFFHAIGVNLKQIYGQT 389
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
E G V D + D VG IPGT+ +I + E
Sbjct: 390 EIIGIAFVHRDGDVRHDTVGLPIPGTEVRISEEGE 424
>gi|89902825|ref|YP_525296.1| AMP-dependent synthetase and ligase [Rhodoferax ferrireducens T118]
gi|89347562|gb|ABD71765.1| AMP-dependent synthetase and ligase [Rhodoferax ferrireducens T118]
Length = 603
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
LGL V +I N EW + +G G A G+Y+T+ + + +D I V E
Sbjct: 59 LGLPEGGHVGVIAENRIEWVLAQMGVSLVGAVAVGVYSTSPTSEVAYVVAHADIEIMVCE 118
Query: 281 DDKQLEKILKVKAQCPKLKAIVQYEGK------PDKPGVI-SWDELMELGRAAPDESL-D 332
D +Q EK+L Q P+L+ IV E K P+ +I ++DE+ +LG A+ + +L D
Sbjct: 119 DQEQAEKVLAALEQLPRLRKIVVMETKGLRSFAPEARQLIATFDEVEQLGAASGNLALID 178
Query: 333 RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPL 392
VL ++ ++YTSG+ G K M+S+ NI I++ +L +A S +S+LPL
Sbjct: 179 EVLAHQTLDDIGLMIYTSGSTGKPKGAMISYRNIRGVVPGIVERLRL-TAETSHLSYLPL 237
Query: 393 SHIAAQTVDIYSVMTVAATLWFAD 416
H+A Q + ++ + + + + F +
Sbjct: 238 CHVAEQMLTTFAPIYIGSQVNFGE 261
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 67 WKK----VTYKLQTTGVKRWIANYAKSTSLQHYMAYLEK-----NVSEPYTYRLVRWLIL 117
W+K ++ KLQ TG R + + Q EK ++ E + L W
Sbjct: 285 WEKMHATISIKLQETGRLRRVLFRQAYAACQ---GLAEKPRAAWSIKEKLVFGLSYWTFF 341
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
++ +GL + +V+L+GAAPI ++ R+F L +P+ EV+G++E G T D +
Sbjct: 342 RALQNFIGLRKAQVALTGAAPIPPDVVRFFRVLGVPLVEVYGLTESTGMVTGHPIDQVIV 401
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
VG G + +I + NGE+ L+
Sbjct: 402 GTVGTPTLGVEHRIGE-----NGELLLR 424
>gi|399031627|ref|ZP_10731530.1| AMP-forming long-chain acyl-CoA synthetase [Flavobacterium sp.
CF136]
gi|398070045|gb|EJL61364.1| AMP-forming long-chain acyl-CoA synthetase [Flavobacterium sp.
CF136]
Length = 592
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 6/213 (2%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCII-GFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
EY A V++A L++G+++ + +I N EW D+G + G +Y T + E
Sbjct: 39 EYIAKANAVSRALLRMGVQKNDKIALITSNNRTEWNIMDIGILQMGVQNVPIYPTIAEED 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L S + C V D++ L+K+ +KA P LK + + + G W EL+ LG
Sbjct: 99 YEYILNHSGSIYCFVSDEEVLQKVNAIKANVPTLKEVYSFN---EIAGCKHWSELLTLGA 155
Query: 325 AAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
++S ++ + ++I + T++YTSGT G K VMLSH NI N ++
Sbjct: 156 DESNQSEVEAIKDSIEEEDLATIIYTSGTTGRPKGVMLSHKNIVSNVLDSAPRIPFDAGK 215
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ HI + + +Y +++F +
Sbjct: 216 STALSFLPICHIFERMI-LYIYQYYGVSVYFGE 247
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ TG+K+ + +A L+ Y Y + ++ R LI SK K+ +G + +S
Sbjct: 284 ELTGIKKKLFFWAIDLGLR-YEPYGANGAWYEFQLKIARKLIFSKWKEGLG-GNLDLMVS 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+A + L R F + +IP+ E +G+SE + V+ + FK+ VG+ I + KI
Sbjct: 342 GSAALQPRLARVFAAAEIPVMEGYGLSETSPVIAVNDQRNKGFKIGTVGKVIRNVEVKIA 401
Query: 193 DPDEEGNGEICLK 205
+GEI K
Sbjct: 402 Q-----DGEILCK 409
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K I+ N K + +KI++FE P +SI G+L PT+K+KR + + Y+ +
Sbjct: 527 EVIKRIDEEIEGINEK-FGHWEKIKRFELTPDVWSINGGQLTPTLKLKRKIIKEIYKDLY 585
Query: 481 DKFY 484
K Y
Sbjct: 586 AKIY 589
>gi|358455236|ref|ZP_09165464.1| Long-chain-fatty-acid--CoA ligase [Frankia sp. CN3]
gi|357081489|gb|EHI90920.1| Long-chain-fatty-acid--CoA ligase [Frankia sp. CN3]
Length = 631
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E R +A FL+ GLE V I+ + E +DL A+ AGG +Y T S
Sbjct: 64 VTWAEVHDRARELAATFLESGLEPGDVVAIMCSSRIEHVVADLAAVLAGGVPVSVYNTLS 123
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG-VISWDELM 320
PE + + I V+E D + A P++ +V + PD ++W E M
Sbjct: 124 PEQVGYVSAQAAPRIVVLETDDHARRWSVALADRPEISRVVTIDATPDADARAVTWSEAM 183
Query: 321 ELGRAAPDESLDRVL---ETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
G AA +L E + ++ T++YTSGT GA K V+L+H NI F A +
Sbjct: 184 AEGAAALGWQGPALLARGEAVRPDDPVTILYTSGTTGAPKGVVLTHRNICFEAVASARTA 243
Query: 378 KLESAALSVISFLPLSHIAAQTVDIY 403
LE +SV S+LP +HIA + + +Y
Sbjct: 244 HLEGPGVSV-SYLPFAHIAERILGMY 268
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L ++ A+GLDR + S AAP+ ++ R+ L + + +V+G++E + T P F
Sbjct: 363 VLRPLRAALGLDRVEWAASAAAPMPVDVARFLAGLGLRVYDVYGLTETTSSATACGPGSF 422
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+L VGR PG + ++ D +GEI ++
Sbjct: 423 RLGTVGRPHPGVELRLAD-----DGEILVR 447
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 438 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+S ++++ FE L ++++ + EL PT+K+KR V KY +ID+ Y
Sbjct: 581 LSRPEQVKAFELLAQEWTVESEELTPTLKLKRRVVGSKYADVIDRLY 627
>gi|452960023|gb|EME65353.1| long-chain fatty-acid--CoA ligase [Rhodococcus ruber BKS 20-38]
Length = 600
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A VR VAK + G+E V I+ EW D AGG +Y T+S
Sbjct: 46 VTAAEFAAQVRGVAKGLMASGIELGDRVAILSSTRYEWVLIDYAIWAAGGCTVAIYETSS 105
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
+ L S ++ VVE+D+ + V P L+ ++Q EG P + DEL+
Sbjct: 106 ADQAQWILEDSGTSLLVVENDEHARTVATVAEAAPALREVLQIEGAPGAKSAV--DELIA 163
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
G A D L+ + TL+YTSGT G K V L+H N+ AA + L +
Sbjct: 164 RGAAITDAQLEERRHQVRAESPATLIYTSGTTGRPKGVQLTHSNLWAEAAAV--KLALPN 221
Query: 382 AALS---VISFLPLSHIAAQTVDIYSV---MTVAAT 411
+ +S + FLPL+H+ A+ + + +TVA T
Sbjct: 222 SMVSGKRTLLFLPLAHVFAREISFGAFEHGVTVAHT 257
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G C ++SG A + L +F + IPI E +G++E G T++ P+
Sbjct: 335 LVYSKLRAALG-GECEQAVSGGAALGARLGHFFRGVGIPIYEGYGLTETTGGVTLNTPEH 393
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ VGR + G +I + +GE+ LK
Sbjct: 394 QRVGSVGRPVNGHAARIAE-----DGELLLK 419
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 428 AAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AA+ N K +SN ++I+K+ L DF+I TGEL PT+K+KR + + + + I+ Y
Sbjct: 544 AAVAEGN-KKVSNPEQIKKYRILEVDFTIETGELTPTLKLKRNVIHEAHGTAIEAIY 599
>gi|388566020|ref|ZP_10152497.1| AMP-dependent synthetase and ligase [Hydrogenophaga sp. PBC]
gi|388266750|gb|EIK92263.1| AMP-dependent synthetase and ligase [Hydrogenophaga sp. PBC]
Length = 619
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 21/228 (9%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y + R A +KLGL+R + I + PEWFY+DLGA G G+Y TN
Sbjct: 46 DYYRDARRTALGLMKLGLQRGDRIVIAAEDIPEWFYADLGAQMLGVQVVGIYPTNPWAEV 105
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQ-----------CPKLKAIVQYEGKPDKPGVI 314
L+ A + + D +Q +K+L + C +K + +Y P +P
Sbjct: 106 LYIAGHCQAKVAITGDQEQTDKVLDAMKEGAGLPHLQHLFCVDMKGLRRY--APGQPH-- 161
Query: 315 SWDELMELGRAAPDES------LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
S++ LM LG E LD+ ++ + ++ LVYTSGT G K ML+H N F
Sbjct: 162 SFEHLMALGDQLAQEDPLAEQRLDQSIDALVPDDVNILVYTSGTTGPPKGAMLTHRNFIF 221
Query: 369 NAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
A + + +LPL H+A + + T+ FA+
Sbjct: 222 AAYSYAAARDMVGKRFESVCYLPLCHVAERGYSTVLHLLTGGTVNFAE 269
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 67 WKKVT----YKLQTTG-VKRWI--ANYAKSTSLQHYMAYLEKNVSEPYTYRLVRW--LIL 117
W+K+ ++++ +G V+RW+ + +L A + V W L+
Sbjct: 293 WEKLQQHFEFRMKDSGRVQRWLYRVGMKRGRALSDRRAEHGRLVKLGDRIEFGVWYALLF 352
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD-FK 176
+++ MGL+R + G A +S E ++F + +P+ + +G++E G V P F
Sbjct: 353 RNMQRHMGLNRTHTRMCGGASVSPETLKFFDIIGLPVGQGYGLTEAGGLAFVQVPGRPFV 412
Query: 177 LDGVGRTIPGTQTKIVDPDE 196
G +PG + K+ + E
Sbjct: 413 SGSCGPAMPGVEWKLGEDGE 432
>gi|86136086|ref|ZP_01054665.1| AMP-binding enzyme [Roseobacter sp. MED193]
gi|85826960|gb|EAQ47156.1| AMP-binding enzyme [Roseobacter sp. MED193]
Length = 631
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 36/250 (14%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y + + L LG++R V I+ + EW Y+D+G GG A+G+YTT+S
Sbjct: 71 YWEQAKWIGLGLLSLGMQRGEVVSILSEDRREWLYTDMGVQGVGGIASGVYTTDSASQLA 130
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV--------ISWDE 318
+ + S + VE+D+QL+K L++ Q P L ++ Y D+ G+ I ++
Sbjct: 131 YLVNDSGSRFLFVENDEQLDKYLEIADQVPGLAKVIIY----DRDGLHDLQQEKCIFIED 186
Query: 319 LMELGRAAPDESLDRVLET-IATN---ECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
L+ +G+A + + ET IA + + L+YTSGT G K ML H+N ++
Sbjct: 187 LVAMGQAY-EAKIPGAFETEIAKSKPEDTAMLIYTSGTTGMPKGAMLGHEN-------VL 238
Query: 375 QYFKLESAALSV------ISFLPLSHIAAQTVDIYSVMTVAATLWFADK------NALKV 422
+ + AL+V + FLPL HI + V +Y + ++T+ FA+ N +V
Sbjct: 239 ASMEAGARALAVDPNDEQLCFLPLCHILERNVSVYFPLGASSTVNFAESPETVFDNMQEV 298
Query: 423 YKATQAAIDR 432
AT A+ R
Sbjct: 299 SPATFFAVPR 308
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 67 WKKVTYKL-----QTTGVKRWI---ANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILS 118
W+K+ ++ + T + RW A A ++ M E + TY +++L
Sbjct: 310 WEKIYSRVLVLAQEATTMGRWAFQQAIKAGQARAEYVMVGKEPPAAIAATYAFWDFMVLR 369
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
+++ +G+D+ R +GAAPIS EL +++ S+ +P+ E +GM+E AG T++ +
Sbjct: 370 NLRRMLGMDKMRRGGTGAAPISPELLKWYWSIGVPLIEGYGMTENAGIATINTLEQNVPG 429
Query: 179 GVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSV 229
VG +PG Q +I + E + G + Y N A+ F G R V
Sbjct: 430 TVGHPVPGVQLRIAEDGEIQTLGLNNFQGYWRNNEKTAETFTADGWLRTGDV 481
>gi|418676760|ref|ZP_13238038.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|400322660|gb|EJO70516.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
Length = 682
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 41 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 99
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 100 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELLEKGKSL 159
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 160 RAGGSKKAEERIAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGA 219
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 220 -RLLSILPIWHVFERVVEYVCIGLGAATYY 248
>gi|395804243|ref|ZP_10483484.1| AMP-dependent synthetase/ligase [Flavobacterium sp. F52]
gi|395433887|gb|EJF99839.1| AMP-dependent synthetase/ligase [Flavobacterium sp. F52]
Length = 592
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY A +++A L++G+++ + +I N EW D+G + G +Y T + E
Sbjct: 38 EEYIAKANAISRALLRMGVQKDDKIALISSNNRTEWNIMDIGILQTGAQNVPIYPTIAEE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S + C V D++ L+K+ +KA P LK + + + G W +L+ LG
Sbjct: 98 DYEYILNHSGSIYCFVSDEEVLQKVNAIKANVPSLKEVYSFN---EIAGCKHWSDLLVLG 154
Query: 324 RAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
++S ++ ++I T++ T++YTSGT G K VMLSH NI N +
Sbjct: 155 EDNSNQSEVEARKDSIKTDDLATIIYTSGTTGRPKGVMLSHKNIVSNVLDSSPRIPFDPG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ HI + + +Y +++F +
Sbjct: 215 KSTALSFLPICHIFERMI-LYIYQYYGVSVYFGE 247
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ TG+K+ + +A L+ Y Y + ++ R LI SK K+ +G + +S
Sbjct: 284 ELTGIKKKLFFWAIDLGLK-YEPYGANGAWYEFQLKIARKLIFSKWKEGLG-GNLDLMVS 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+A + L R F + +IP+ E +G++E + V+ + FK+ VG+ I + KI
Sbjct: 342 GSAALQPRLTRVFAAAEIPVMEGYGLTETSPVIAVNDQRNRGFKIGTVGKPIRNLEVKIA 401
Query: 193 DPDEEGNGEICLK 205
+ +GEI LK
Sbjct: 402 E-----DGEILLK 409
>gi|421130910|ref|ZP_15591101.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|410357714|gb|EKP04934.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 682
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 41 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 99
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 100 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELLEKGKSL 159
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 160 RAGGSKKAEERIAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGA 219
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 220 -RLLSILPIWHVFERVVEYVCIGLGAATYY 248
>gi|347536925|ref|YP_004844350.1| long-chain-fatty-acid--CoA ligase [Flavobacterium branchiophilum
FL-15]
gi|345530083|emb|CCB70113.1| Long-chain-fatty-acid--CoA ligase [Flavobacterium branchiophilum
FL-15]
Length = 592
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNA-PEWFYSDLGAIYAGGFAAGMYTTNSPE 263
++Y +++A L+L +++ + II N EW D+G + G +Y T S E
Sbjct: 38 QQYINKANAISRALLQLQVQKNDKIAIISSNNRTEWHIMDVGILQTGAQTVPIYPTISQE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S+A+ C V D + L+K+L +K+ P LK I + + +W L++LG
Sbjct: 98 DYEYILNHSEASYCFVSDAEVLQKVLNIKSNTPHLKGIYSFN---ELDNCTNWATLLDLG 154
Query: 324 RAAPDESLDRVLET----IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
D+SL +E + + T++YTSGT G K VMLSH NI N
Sbjct: 155 H---DDSLQNEVENRKNGVLETDLATIIYTSGTTGKPKGVMLSHQNIVSNVLDSAPRIPF 211
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
E +SFLP+ HI + + +Y +++F +
Sbjct: 212 EQGKTRALSFLPICHIFERMI-LYLYQYYGVSVYFGE 247
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V K ++ ++ N K N ++I++FE P +SI GEL PT+K+KR +++KY + +
Sbjct: 528 VIKRIKSEVELINQK-FGNWEQIKRFELTPNIWSIDGGELTPTLKLKRKIILEKYNYLYE 586
Query: 482 KFY 484
K Y
Sbjct: 587 KIY 589
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 110 RLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV 169
++ R LI SK K+ +G + +SG+A + L R F + +IP+ E +G++E + +V
Sbjct: 318 KIARKLIFSKWKEGLG-GNIELLVSGSAALQPRLTRIFAAANIPVMEGYGLTETSPVISV 376
Query: 170 SAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
+ + FK+ VG+ I KI + E
Sbjct: 377 NDMRNKGFKVGTVGKVIQNVTVKIAEDGE 405
>gi|421089079|ref|ZP_15549894.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410002200|gb|EKO52722.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
Length = 682
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 41 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 99
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 100 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELLEKGKSL 159
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 160 RAGGSKKAEERIAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGA 219
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 220 -RLLSILPIWHVFERVVEYVCIGLGAATYY 248
>gi|373955660|ref|ZP_09615620.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
gi|373892260|gb|EHQ28157.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
Length = 587
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
V V+ L LG+ + V I+ N PEW + D G + G MY T S L
Sbjct: 43 VNLVSYGLLALGVIKEDKVAIMSPNRPEWNFCDFGIMQIGATQVPMYPTLSDADIEFILK 102
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
+ + V D + KI +K + I YE PG W E++ELG+A
Sbjct: 103 DAGVKVIFVADKEIYSKINSIKDKVSPDLVIYTYE---KVPGAKHWSEVLELGKANTQLD 159
Query: 331 LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS-VISF 389
L + + I ++ TL+YTSGT G K VML+H N+ N +++ KL A + +SF
Sbjct: 160 LQQYRDNIQPDDLLTLIYTSGTTGTPKGVMLTHGNLVSN---VLESSKLYPAEIKRALSF 216
Query: 390 LPLSHIAAQTVDIYSVMTVAATLWFA 415
LP+SHI + V IY + + ++++A
Sbjct: 217 LPMSHIFERMV-IYMYVYLGISIYYA 241
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRL----VRWLILSKVKQAMGLDRCR 130
+ TGVK+ I N++ L++ + EKN + Y L R L+ SK K+A+G D
Sbjct: 279 ELTGVKKTIFNWSLQLGLKYELD--EKN---GWLYELKLKIARKLVFSKWKEALGGDIIA 333
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAP--DDFKLDGVGRTIPGTQ 188
+ +SG A + L R F + I + E +G++E + V+ P K VG + G
Sbjct: 334 I-VSGGAALQPRLARVFWAAGILVLEGYGLTETSPVMAVNFPASGGTKFGTVGPVLEGVS 392
Query: 189 TKIVDPDEEGNGEICLK 205
KI + +GEI +K
Sbjct: 393 VKIAE-----DGEILVK 404
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 430 IDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
IDR N + ++++KFE + ++SI TGE+ P + +KR ++KKY ++ K Y
Sbjct: 531 IDRYN-AGFGHWEQVKKFELIADEWSINTGEMTPKLSLKRKVILKKYDKLVQKIY 584
>gi|156740564|ref|YP_001430693.1| AMP-dependent synthetase/ligase [Roseiflexus castenholzii DSM
13941]
gi|156231892|gb|ABU56675.1| AMP-dependent synthetase and ligase [Roseiflexus castenholzii DSM
13941]
Length = 649
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 8/220 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +++ +VR A LG++R V IIG N PEW Y++L GG + G+Y +
Sbjct: 36 VTWRQFADHVRAFALGLRALGVQRGDKVAIIGDNRPEWLYAELATQAIGGASIGVYQDSV 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISWD 317
E + + +DA + VVED +Q++K++++ +Q + ++ YE K + P + S+
Sbjct: 96 AEEVRYLVEAADARVIVVEDQEQVDKMIEIWSQLHGVLKVIYYEPKGLRRYQAPYLASFP 155
Query: 318 ELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
++ ELGR E + L ++ L TSGT G K ML+H N+ A ++
Sbjct: 156 DIEELGRVYDREHPGLFEAELAQGRPDDVAILSTTSGTTGKPKLAMLTHRNLISQGAGLL 215
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWF 414
L +SFLPL+ + Q + + + + T+ F
Sbjct: 216 AVDPL-GPDDEFVSFLPLAWVGEQMITVAAGLQCGLTINF 254
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L R L+ ++K +GL + + +G A + ++ R++ ++ + + +V+G +E AG
Sbjct: 330 YTLARLLVFEELKDHLGLRFLKRAYTGGAALGPDVFRFYHAIGVNLKQVYGQTESAGLSV 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ K VG +P T+ I NGEI +K
Sbjct: 390 IHRDGQIKFQTVGTPLPNTEVHIA-----ANGEILVK 421
>gi|359689644|ref|ZP_09259645.1| long-chain-fatty-acid CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749983|ref|ZP_13306271.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
gi|418759344|ref|ZP_13315524.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384113835|gb|EIE00100.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274868|gb|EJZ42186.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
Length = 679
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 6/223 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YEA V +A+A + LG++ V ++ N EW +D G I G T + +
Sbjct: 40 YEAGV-NLAEALIDLGIQSRDHVALLADNRVEWIIADYGIIMTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ + S++ + +E+DK LEK + K+Q K+K I+ + + + PGV+ +L+E G
Sbjct: 99 YIVSHSESEVVFIENDKMLEKFNRNKSQLGKVKTIIIMDKESEAPGVLKMYDLIEKGKSL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA+ ++ + I + TL+YTSGT G K V L H N+ + K+ + A
Sbjct: 159 RASGSRKVEDRVAAIKPEDLFTLIYTSGTTGLPKGVQLRHSNMMHQVLNVTPMLKINAEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKAT 426
++S LP+ H+ + V+ Y +++ A ++ + L+ AT
Sbjct: 219 -KLLSILPVWHVFERVVE-YVCISIGAATYYTNVRDLRQDLAT 259
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
++LSK++ A G R R S+SG + + +F ++ I + E +GM+E + +V
Sbjct: 389 IVLSKIRTATG-GRLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQK 447
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTV 214
+ VG +P T +I + + E L E + N + +
Sbjct: 448 LIIGSVGSIVPKTNLQIRNDNNE-----VLTEVDENGKVI 482
>gi|256420160|ref|YP_003120813.1| AMP-dependent synthetase and ligase [Chitinophaga pinensis DSM
2588]
gi|256035068|gb|ACU58612.1| AMP-dependent synthetase and ligase [Chitinophaga pinensis DSM
2588]
Length = 596
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 9/190 (4%)
Query: 229 VCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKI 288
+ II N PEW +DL AG A +Y T S L S A+I + + LEKI
Sbjct: 72 IAIISPNRPEWVITDLACQQAGAILAPLYPTLSEHEMEFILNDSGASILFISGEDMLEKI 131
Query: 289 LKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVY 348
++ + +LK I + G W E+ E+ A + + + E+ ++ T++Y
Sbjct: 132 KPIRHKLTQLKEIYSFN---KIAGARHWLEIPEMATQADMDRIPAIRESTKPDQLATIIY 188
Query: 349 TSGTEGASKPVMLSHDNITFNAACIIQYF--KLESAALSVISFLPLSHIAAQTVDIYSVM 406
TSGT G K VML+HDNI N I Y LE+ AL SFLPL+H+ + V Y +
Sbjct: 189 TSGTTGTPKGVMLTHDNIMSNVTACIPYLPVSLEARAL---SFLPLNHVFERMVT-YVYL 244
Query: 407 TVAATLWFAD 416
T +++A+
Sbjct: 245 TAGVPIYYAE 254
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISN 440
+ AL V SF L AA+ + T + + + ++YK +++ N + S+
Sbjct: 500 TGALVVPSFPNLESWAAKK----GIRTGSHEELLQNTDIQQLYKQ---VVEKYN-QYFSH 551
Query: 441 AQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
++I+KFE LP +++I GEL PT+KVKR + ++Y+ I+K Y+
Sbjct: 552 IEQIKKFELLPQEWTIANGELSPTLKVKRKVIAQRYEQQIEKIYN 596
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 21/140 (15%)
Query: 74 LQTTGVKR----WIANYAKSTSLQHYMAYLEKNVSEPYTYRL--VRWLILSKVKQAMGLD 127
L+ GVKR W K + + + Y ++L L+ K ++A+G
Sbjct: 290 LELKGVKRALFFWSVELGKKYEINKSLGWW-------YNFQLSIANKLVFKKWREALG-G 341
Query: 128 RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPD--DFKLDGVGRTIP 185
+ G+AP L + F + IPI E +G++E + +V+ D D VG I
Sbjct: 342 NIDAIVVGSAPCQVRLLKIFTAAHIPILEGYGLTETSPVISVNRVDEKDRMFGTVGPLIS 401
Query: 186 GTQTKIVDPDEEGNGEICLK 205
+ ++ + +GEIC K
Sbjct: 402 NVEVRLAE-----DGEICCK 416
>gi|319796241|ref|YP_004157881.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
gi|315598704|gb|ADU39770.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
Length = 626
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A L LG I+ EW D+ + GG + G+Y T++ +
Sbjct: 68 VREIAGGLLALGFGHGECASILSNTVIEWVLCDVAVLSCGGVSNGIYPTDAASQVHYLCE 127
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIV--QYEG--KPDKPGVISWDELMELGR-- 324
S + VEDD+QL+K L+V+AQ P L+ I+ EG D PGVIS D L LGR
Sbjct: 128 DSRTTVLFVEDDEQLDKALEVRAQLPLLRKIIVLDMEGLRDLDDPGVISLDALRALGREH 187
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
A ++L++ + + LVYTSGT G K M SH + + +
Sbjct: 188 LKANPQALEQRIAACRAEDLAILVYTSGTTGKPKGAMHSHRGLVYTMRG-YNTLLAQGET 246
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ FLPL HIA + Y M + L F +
Sbjct: 247 DERMCFLPLCHIAERMGGEYFAMYTGSILNFVEN 280
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ +R+ RWL L+ V++ +G+ R R ++GAAPIS +L R++L+L +P+ EV+GM+E GA
Sbjct: 351 FKFRIARWLALNNVRKLIGIHRARFLVTGAAPISPDLVRWYLALGVPMLEVWGMTESCGA 410
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
T P +G P T V D E GEI ++
Sbjct: 411 STGVPPSRIAPGSIG---PATSYNEVRLDPE-TGEILVR 445
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
A +V Q IDR N K + ++I+KF L S EL PTMK+KR V KY
Sbjct: 560 RAQEVLDLIQGEIDRVNAK-FARVEQIKKFFLLETQLSAEDEELTPTMKLKRKLVQTKYA 618
Query: 478 SIIDKFY 484
I+ Y
Sbjct: 619 DRIEAMY 625
>gi|455792690|gb|EMF44430.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 681
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELIEKGKAL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 159 RAGGSKKAEERIAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|421109934|ref|ZP_15570441.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|410004961|gb|EKO58765.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 681
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELVEKGKSL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 159 RAGGSKKAEERIAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|418696124|ref|ZP_13257133.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|409955653|gb|EKO14585.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
Length = 682
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 41 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 99
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 100 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELVEKGKSL 159
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 160 RAGGSKKAEERIAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGA 219
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 220 -RLLSILPIWHVFERVVEYVCIGLGAATYY 248
>gi|407275353|ref|ZP_11103823.1| long-chain fatty-acid--CoA ligase [Rhodococcus sp. P14]
Length = 600
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A VR VAK + G+E V I+ EW D AGG +Y T+S
Sbjct: 46 VTAAEFAAQVRGVAKGLMASGIELGDRVAILSSTRYEWVLIDYAIWAAGGCTVAIYETSS 105
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
+ L S ++ VVE+D + V P L+ ++Q EG P + DEL+
Sbjct: 106 ADQAQWILEDSGTSLLVVENDGHARTVATVAEAAPALREVLQIEGAPGAKSAV--DELIA 163
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
G A D L+ + TL+YTSGT G K V L+H N+ AA + L +
Sbjct: 164 RGAAITDAQLEERRHQVRAESPATLIYTSGTTGRPKGVQLTHSNLWAEAAAV--KLALPN 221
Query: 382 AALS---VISFLPLSHIAAQTVDIYSV---MTVAAT 411
+ +S + FLPL+H+ A+ + + +TVA T
Sbjct: 222 SMVSGKRTLLFLPLAHVFAREISFGAFEHGVTVAHT 257
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G C ++SG A + L +F + IPI E +G++E G T++ P+
Sbjct: 335 LVYSKLRAALG-GECEQAVSGGAALGARLGHFFRGVGIPIYEGYGLTETTGGVTLNTPEH 393
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK------EYEANVRTVAKAFLKLGLERYHS 228
++ VGR + G +I + +GE+ LK Y N + A+A +
Sbjct: 394 QRVGSVGRPVNGHAARIAE-----DGELLLKGPAVFGGYWKNEKATAEAIVD-------- 440
Query: 229 VCIIGFNAPEWFYS-DLGAIYAGGF 252
WF++ D+G I GF
Sbjct: 441 ---------GWFHTGDIGRIDEDGF 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 428 AAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AA+ N K +SN ++I+K+ L DF+I TGEL PT+K+KR + + + + I+ Y
Sbjct: 544 AAVAEGN-KKVSNPEQIKKYRILEVDFTIETGELTPTLKLKRNVIHEAHGTAIEAIY 599
>gi|386822131|ref|ZP_10109346.1| AMP-forming long-chain acyl-CoA synthetase [Joostella marina DSM
19592]
gi|386423377|gb|EIJ37208.1| AMP-forming long-chain acyl-CoA synthetase [Joostella marina DSM
19592]
Length = 590
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY ++ L+LG++ + +I N EW +D+G + G +Y T S E
Sbjct: 37 QEYVDKANQFSRGLLRLGIQPNEKIAVITHTNRTEWHIADIGILQIGAQNVPIYPTISEE 96
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S A+ C V D++ LEK+ +K P LK + + D P +W+E++ LG
Sbjct: 97 DYEYILNHSGASYCFVSDNEILEKLNAIKQNVPTLKEVYAF---GDIPNTKNWEEILTLG 153
Query: 324 --RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
++ DE R + + T + T++YTSGT G K VMLSH NI + + L+
Sbjct: 154 DDKSNQDEVEARK-KAVTTEDLATIIYTSGTTGRPKGVMLSHKNIVSDVLASEERVPLDP 212
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++ +SFLP+ HI + V +Y ++FA+
Sbjct: 213 RDVA-LSFLPICHIFERMV-VYLYQHCGIKIYFAE 245
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ + R LI SK ++ +G +V +SG+A + L R F + IP+ E +G++E +
Sbjct: 313 FQLSIARKLIFSKWQEGLG-GNLKVMVSGSAALQPRLSRVFGAAGIPVMEGYGLTETSPV 371
Query: 167 HTVSAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+V+ + +K+ VG+ +PG + KI + +GEI K
Sbjct: 372 ISVNDQKNRGWKIGTVGKMLPGVEVKIAE-----DGEIICK 407
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K Q +D N K ++I+ FE P ++S+ G L PT+K+KR + +KY +
Sbjct: 525 EVIKRIQEEVDHYNEK-FGRWERIKLFELTPDEWSVEDGHLTPTLKLKRRIIKEKYSDLY 583
Query: 481 DKFYD 485
+K YD
Sbjct: 584 NKIYD 588
>gi|418698153|ref|ZP_13259132.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418711864|ref|ZP_13272616.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418717129|ref|ZP_13276966.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|418726085|ref|ZP_13284696.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421123845|ref|ZP_15584115.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135046|ref|ZP_15595176.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|409959995|gb|EKO23749.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410020929|gb|EKO87724.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438332|gb|EKP87418.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410762857|gb|EKR29016.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410767830|gb|EKR43091.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410787196|gb|EKR80930.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|456969848|gb|EMG10764.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 681
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELIEKGKAL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 159 RAGGSKKAEERIAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|297624578|ref|YP_003706012.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
gi|297165758|gb|ADI15469.1| AMP-dependent synthetase and ligase [Truepera radiovictrix DSM
17093]
Length = 656
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E E+ VR A L LG+ V ++ N PEW +L A G G+Y ++SP+
Sbjct: 46 EVESEVRRAALGLLSLGVVPGDRVAVLADNIPEWLLLELAAQSLGAMTVGIYASSSPDEV 105
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-----DKPGVISWDELM 320
+ L ++A++ + ED +Q++K+L ++ + P LK ++ + + + P I+W EL+
Sbjct: 106 DYLLSYTEASVLLAEDQEQVDKVLGLRERLPHLKKVIVEDPRGMRAYLEDPWFITWSELL 165
Query: 321 ELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
LG A + +A ++ C L TSGT G K MLSH N A + Q
Sbjct: 166 RLGEALGAREPELFRAHVAQGNPDDICHLSTTSGTTGRPKAAMLSHRNYLAMATALHQVD 225
Query: 378 KLESAALSVISFLPLSHIAAQTVDI 402
+ S +S+LP + I Q +
Sbjct: 226 PIASGD-DYVSYLPFAWIVEQVFAV 249
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 67 WKKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPY----TYRLVRWLILSKVKQ 122
W K++ ++ + RW+ + AY + P+ YRL L+ +K
Sbjct: 295 WVKIS---ESYTLNRWVYRRLMRVG-ERAAAYRMRGERLPWGLALAYRLAHALLFRPLKD 350
Query: 123 AMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGR 182
+G R R + +G A + + +F + + + +V+G +E AG V D + D VG
Sbjct: 351 QLGFLRLRRAYTGGAALGPDTFTFFQGIGVNLKQVYGQTETAGLAYVQPDGDIRPDTVGV 410
Query: 183 TIPGTQTKIVDPDE 196
+PG + +I + E
Sbjct: 411 PLPGVEVRISEAGE 424
>gi|456986311|gb|EMG21907.1| AMP-binding enzyme [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 646
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 2 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 60
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 61 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELIEKGKAL 120
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 121 RAGGSKKAEERITAIDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGA 180
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 181 -RLLSILPIWHVFERVVEYVCIGLGAATYY 209
>gi|45657502|ref|YP_001588.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417765801|ref|ZP_12413757.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417782883|ref|ZP_12430606.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|421086152|ref|ZP_15547003.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421102594|ref|ZP_15563198.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600741|gb|AAS70225.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400351740|gb|EJP03953.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|409953584|gb|EKO08080.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|410367708|gb|EKP23092.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431717|gb|EKP76077.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
Length = 681
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELIEKGKAL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 159 RAGGSKKAEERITAIDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|448350459|ref|ZP_21539272.1| AMP-dependent synthetase and ligase [Natrialba taiwanensis DSM
12281]
gi|445636729|gb|ELY89889.1| AMP-dependent synthetase and ligase [Natrialba taiwanensis DSM
12281]
Length = 680
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 19/255 (7%)
Query: 181 GRTIPGTQTKIVDPDEEGNG--EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPE 238
GR++ GT + V P E + I E VR +A F LG+E V I E
Sbjct: 45 GRSLTGTDSDAVLPPAEPDAFRAISYAEMRDIVRNLAAGFRDLGVESGDRVGIFSNTRME 104
Query: 239 WFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKL 298
W +D + AG +YT++SPE + L DA+ VVE+ + LE++L V+ + +L
Sbjct: 105 WAQTDFALLGAGAVVTTVYTSSSPEQVSYLLDDPDADGVVVENQELLERVLAVEDEL-EL 163
Query: 299 KAIVQYEGKP-----DKPGVISWDELMELGRAAPD-ESLDRVLETIATNECCTLVYTSGT 352
+ IV + P D+ V++ EL + G A D E+ ++ A ++ +L+YTSGT
Sbjct: 164 EFIVSIDELPGAAYDDRDDVLTLAELHDRGAAVFDAETYREWVDEPAMDDLASLIYTSGT 223
Query: 353 EGASKPVMLSHDNITFNAACIIQYFK----------LESAALSVISFLPLSHIAAQTVDI 402
G K V L+H N N I + F + A +S+LPL+H+ +T
Sbjct: 224 TGQPKGVRLTHGNFRANVNQIRKRFAPRPDRDADVPVIDAESQAMSYLPLAHVFERTAGH 283
Query: 403 YSVMTVAATLWFADK 417
+ + A + +A+
Sbjct: 284 FLLFASGACVAYAEN 298
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 416 DKNAL----KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPF 471
D +AL +V++ Q +DRAN + I++FE +P +F+ L PTMK KR
Sbjct: 606 DTDALCDDERVHEYVQREVDRAN-DGFEKHETIKQFELVPVEFTEENEMLTPTMKKKRRV 664
Query: 472 VVKKYQSIIDKFYD 485
++ ++ +D+ Y+
Sbjct: 665 ILDRFGDRVDRIYE 678
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + +SG +S EL R + ++ +PI E +G++E + V+ PDD
Sbjct: 372 LVFSTVREALGGE-IESLISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVIAVNPPDD 430
Query: 175 FKLDGVGRTIPGTQTKI 191
++ +G T+ I
Sbjct: 431 PRIGTIGPTLTDVDISI 447
>gi|163744562|ref|ZP_02151922.1| putative long-chain fatty-acid--CoA ligase [Oceanibulbus indolifex
HEL-45]
gi|161381380|gb|EDQ05789.1| putative long-chain fatty-acid--CoA ligase [Oceanibulbus indolifex
HEL-45]
Length = 605
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI + ++ A + LGL V I+ N EW + G A G GMY T+
Sbjct: 40 EITWAGLQEIMQATAAGLVDLGLAPGGHVGILSENRSEWVQAQFGINAAAGVVVGMYPTS 99
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK----PDKPGVISW 316
H + SD + +ED +QL+KI ++ + P+LK +V + K D G+IS+
Sbjct: 100 PAAELEHLVNASDTTVLFIEDQEQLDKIKELDGRVPQLKQLVIFNPKGTRGEDLLGLISF 159
Query: 317 DELMELGRAAPDESLDRVLET---IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
D+L+ GRA E D + I ++ +V+TSG+ G K +S+ NI
Sbjct: 160 DDLLARGRARIAELNDDLRARQAGIKPDDTAMMVFTSGSTGLPKAAEISYGNIHAGVGVA 219
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
F V+S+LPL HIA Q V + + ++ + F +
Sbjct: 220 RDVFGEYPPGTDVLSYLPLCHIAEQAVTVINGLSQQFVMNFGE 262
>gi|218779012|ref|YP_002430330.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218760396|gb|ACL02862.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 594
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y V+ ++ + L + + V ++G N+ WF +D+ A+ G + +Y TNS
Sbjct: 37 DYAGAVQDFSRCLIALEVPQGGKVGLMGKNSANWFVADMAAMTMGAVSVPIYETNSGPQI 96
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLK--AIVQYEGKPDK--PGVISWDELME 321
+ L ++ + +++D LE ++V+ +L+ V + D+ P V S++EL
Sbjct: 97 QYILKHAECCVFLIDD---LEFFVRVQPYFDELENPCKVAFFSPQDQEHPLVTSYEELQL 153
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
G+A P E L + E I + CTL+YTSGT G K VML+H N A + + +
Sbjct: 154 QGKAVPVEELAKRKERITPEDVCTLIYTSGTTGPPKAVMLTHKNCLAAAENVYLTTRSAN 213
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWF 414
+ + S+LPLSH+A +TV I+S + ++F
Sbjct: 214 PSAASCSYLPLSHVAERTVSIFSPLLDGRPVYF 246
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 80 KRWIANYAKSTSLQ-HYMAYLEKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
K+ + +A ST LQ + + Y +K V P +++ + L+L+K+ +++G+DR ++SG
Sbjct: 290 KQKLIKWALSTGLQANQLMYEKKPVPLPLKISHKAAKGLVLNKILKSLGMDRVETAVSGG 349
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
A +S E+ +F+ L + + +V+G +E G + + + + G+ P + +I +
Sbjct: 350 AVLSREVLNFFVGLGVWLQDVYGQTEGHGTTSFATREAIRFGSAGKPYPLVKIRIAE--- 406
Query: 197 EGNGEICLK 205
+GEI +K
Sbjct: 407 --DGEILVK 413
>gi|418667893|ref|ZP_13229298.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410756338|gb|EKR17963.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 681
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELIEKGKAL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 159 RAGGSKKAEERIAAIDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|24215009|ref|NP_712490.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|417762662|ref|ZP_12410650.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417772209|ref|ZP_12420098.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417777581|ref|ZP_12425398.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|418671706|ref|ZP_13233055.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418680951|ref|ZP_13242188.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418692704|ref|ZP_13253782.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418704164|ref|ZP_13265043.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418730633|ref|ZP_13289127.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|421120870|ref|ZP_15581175.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|24196054|gb|AAN49508.1|AE011400_13 long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|400327389|gb|EJO79641.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400357937|gb|EJP14057.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409941407|gb|EKN87036.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409945580|gb|EKN95595.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410346208|gb|EKO97218.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410572568|gb|EKQ35633.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410581404|gb|EKQ49216.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410766144|gb|EKR36832.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410774842|gb|EKR54846.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|455667422|gb|EMF32743.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 681
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELIEKGKAL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 159 RAGGSKKAEERIAAIDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|421117548|ref|ZP_15577908.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410010882|gb|EKO69013.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
Length = 681
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELIEKGKAL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 159 RAGGSKKAEERIAAIDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|456821979|gb|EMF70485.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 643
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 2 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 60
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 61 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELIEKGKAL 120
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + +++ A
Sbjct: 121 RAGGSKKAEERIAAIDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGA 180
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 181 -RLLSILPIWHVFERVVEYVCIGLGAATYY 209
>gi|89890831|ref|ZP_01202340.1| Long-chain-fatty-acid--CoA ligase (synthetase) [Flavobacteria
bacterium BBFL7]
gi|89516976|gb|EAS19634.1| Long-chain-fatty-acid--CoA ligase (synthetase) [Flavobacteria
bacterium BBFL7]
Length = 596
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 214 VAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTS 272
+++ ++LG++ V II N EW D+G + G +Y T S E + L S
Sbjct: 49 ISRGLIELGIQPNDKVAIISTVNRSEWNIVDIGIMQTGAQDVPVYPTISEEDYQYVLNHS 108
Query: 273 DANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES-L 331
++ V DD+ K+L +K Q P L + ++ G +WDE+ +LG + ++ L
Sbjct: 109 ESKYVFVSDDEVRNKVLSIKDQVPSLLEVFSFD---QINGCKNWDEVKQLGASQDHQAEL 165
Query: 332 DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLP 391
++ + I + TL+YTSGT G K VMLSH NI+ NA ++ +SFLP
Sbjct: 166 EKRMAAITEEDLATLIYTSGTTGRPKGVMLSHKNISSNAITSATRLPIDLGRSKALSFLP 225
Query: 392 LSHIAAQTVDIYSVMTVAATLWFAD 416
+ HI + + Y ++FA+
Sbjct: 226 VCHIYERMLQ-YMYTYTGTGIYFAE 249
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
++ Q ID N K N ++I+KFE P +++I G L PT+K+KR + +Y+ +
Sbjct: 529 RIINRYQKEIDFYNTK-FGNWERIKKFELTPEEWTIEDGHLTPTLKLKRRIIKARYKDLY 587
Query: 481 DKFY 484
D+ Y
Sbjct: 588 DQIY 591
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L + LI SK ++A+G + SG+A + L R F + +P+ E +G++E + +V+
Sbjct: 321 LAKKLIFSKWQEALG-GNLKAIASGSAALQPRLARVFNAAGVPVMEGYGLTETSPVISVN 379
Query: 171 APDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
D FK+ VG+ +P T +I + +GEI +
Sbjct: 380 DLRDGGFKIGTVGKILPNTDVQIAE-----DGEIII 410
>gi|220916725|ref|YP_002492029.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954579|gb|ACL64963.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 604
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 23/242 (9%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E R VA LGL V IIG EW +DLG + AGG +Y +N
Sbjct: 44 DVSWAEMARRARDVADGLAALGLRAGDRVAIIGDTNLEWILADLGILGAGGITVTIYQSN 103
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDE-L 319
+P C + L S A + Q+ KI +V+A+ P L+A+V+ +G P +++ L
Sbjct: 104 TPTECQYILADSGARFVFCDSAAQVAKIREVRAKLPALEALVRAQG----PAADAFERTL 159
Query: 320 MELGRAA-------PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
++ RA PD R L I ++ + +YTSGT G K V+L+H N + A
Sbjct: 160 ADVERAGVAWRASNPDAHAAR-LARIGRDDPASFIYTSGTTGNPKGVVLTHGNWVYEALA 218
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDR 432
++ K+ ++ FLP++H A+ ++ +WF+ ++ + +D
Sbjct: 219 -VEGLKVVRPDDLILMFLPMAHSFAKVIE---------AVWFSTGATGAFVESLEKIVDN 268
Query: 433 AN 434
A
Sbjct: 269 AG 270
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q ID N + S A I+KFE LP DF+ TGEL PT+KVKR V ++Y++++D FY
Sbjct: 546 QQTIDALNARQASYAT-IKKFEILPRDFTQATGELTPTLKVKRKVVTQQYRALLDSFY 602
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 128 RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGT 187
R R+ +SG AP+S ++ +F L I E +G++E + V+ P ++ VG +PGT
Sbjct: 353 RMRLFVSGGAPLSPKIAHFFDQLGFVILEGYGLTETSAGTFVNRPGANRIGTVGPPVPGT 412
Query: 188 QTKIVDPDE-EGNGEICLKEYEAN 210
+ +I + E G +KEY N
Sbjct: 413 EVRIAEDGEILVRGPCVMKEYYNN 436
>gi|23013575|ref|ZP_00053454.1| COG1022: Long-chain acyl-CoA synthetases (AMP-forming)
[Magnetospirillum magnetotacticum MS-1]
Length = 345
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 229 VCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKI 288
V ++ N PEW +DL + AGG + YTTN+ H L A + +V E+I
Sbjct: 66 VMLVAENRPEWAMADLAIMAAGGISVPAYTTNTVADHRHILDNCGARLVIVSTRALAERI 125
Query: 289 LKVKAQCPKLKAIVQYE--GKPDKPGV--ISWDELMELGRAAPDESLDRVLETIATNECC 344
L A + AI+ E PGV SW+ ++ELGR A + + ++ + ++
Sbjct: 126 LPAAAHSDQAPAIIAMEPLALAQSPGVDIHSWEAVLELGRGA-EAPIRTIIAGLKRDDTA 184
Query: 345 TLVYTSGTEGASKPVMLSHDNITFN---AACIIQYFKLESAALSVISFLPLSHIAAQTVD 401
L+YTSGT G K VMLSH I N A +++ LE+ +SFLPLSH T
Sbjct: 185 CLIYTSGTGGVPKGVMLSHGAILCNCMGATDVLRELGLENEVF--LSFLPLSHAYEHTAG 242
Query: 402 IYSVMTVAATLWFAD 416
+Y +++ A + +A+
Sbjct: 243 LYFPISIGAEIRYAE 257
>gi|422004329|ref|ZP_16351549.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256998|gb|EKT86406.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 681
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE V+ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGVQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + VE+DK LEK + K+Q +K ++ + + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFVENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMRDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RANGSQKAEERIAAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|410450361|ref|ZP_11304402.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|410015874|gb|EKO77965.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|456875112|gb|EMF90343.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 682
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE V+ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 41 YEQGVQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 99
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + VE+DK LEK + K+Q +K ++ + + PGV+ +L+E G
Sbjct: 100 YILNHSEVEVVFVENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMRDLIEKGKKL 159
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 160 RANGSQKAEERIAAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 219
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 220 -RLLSILPIWHVFERVVEYVCIGLGAATYY 248
>gi|418755411|ref|ZP_13311616.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|409964206|gb|EKO32098.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
Length = 681
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE V+ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGVQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + VE+DK LEK + K+Q +K ++ + + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFVENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMRDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RANGSQKAEERIAAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|313676617|ref|YP_004054613.1| amp-dependent synthetase and ligase [Marivirga tractuosa DSM 4126]
gi|312943315|gb|ADR22505.1| AMP-dependent synthetase and ligase [Marivirga tractuosa DSM 4126]
Length = 586
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 6/206 (2%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
V ++++ FLKLGL + V I+ N PEW + DL G + MY T +P+
Sbjct: 43 VDSISRGFLKLGLAKNDKVGIVSSNRPEWNFIDLALQQIGAVSVPMYPTITPKDYKFIFE 102
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
S ED + +K+ K +K I +E K D GV W EL E G + + +
Sbjct: 103 DSGLKYVFAEDQELYDKVKKASEGLSFIKNIYSFE-KLD--GVSYWTELKESG-GSDETN 158
Query: 331 LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFL 390
L + + + TL+YTSGT G K VML+H N+ NA + + ++ S +SFL
Sbjct: 159 LQPYRDEVDPEDLVTLIYTSGTTGNPKGVMLTHHNVLSNAKAVNENLDVDGLRKS-LSFL 217
Query: 391 PLSHIAAQTVDIYSVMTVAATLWFAD 416
PL HI +T +Y + +++A+
Sbjct: 218 PLCHIFERT-SVYFYLYRGVAVYYAE 242
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 68 KKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTY--RLVRWLILSKVKQAMG 125
K V + TGVK+ + +A +L H KN Y + RL LI SK ++A+G
Sbjct: 272 KIVAKGMDLTGVKKSLFFWA--LNLGHKFD-RNKNQGAWYNFQLRLANKLIFSKWREAVG 328
Query: 126 LDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG--AHTVSAPDDFKLDGVGRT 183
++ SG A + L F S IP+ E +G++E + A +D + VG
Sbjct: 329 -GNIKLIASGGAALQPRLATIFWSAQIPVLEAYGLTETSPGIAFNRYNKEDMLIGTVGPA 387
Query: 184 IPGTQTKIVDPDEEGNGEICLK 205
+PG + KI + +GE+ K
Sbjct: 388 LPGVEIKIAE-----DGEVLAK 404
>gi|448607753|ref|ZP_21659706.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
gi|445737690|gb|ELZ89222.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
Length = 668
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 14/229 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E VR +A F LG+E V I+ EW +D + AGG +YT++
Sbjct: 64 DLTYEEMRGVVRRLAAGFRDLGIESGDRVGILSHTRMEWAQTDFAVLGAGGVVTTVYTSS 123
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWD 317
S + L AN VVE+++ LE++L ++ + L+ IV +Y+G+ D+ V++
Sbjct: 124 SERQVQYLLSDPGANAVVVENEELLERVLAIEDEL-DLRFIVVVDEYDGRDDRDDVLTLG 182
Query: 318 ELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
EL G DE + + L+ + +L+YTSGT G K V L+H N N +
Sbjct: 183 ELYRRGEGVYDEAAAESWLDERDPEDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRR 242
Query: 377 F-----KLESAALS----VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
F K ++ + +SFLPL+H+ + + + AT+ +A+
Sbjct: 243 FGPRPDKGDTPVIGPDAVTLSFLPLAHVFERMAGHFMMFAAGATVAYAE 291
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ +V++A+G D +SG +S EL + ++ +PI E +G++E + +
Sbjct: 360 HRLADRLVFGQVREALG-DNIDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P++ K+ +G + +TK+
Sbjct: 419 VNPPEEPKIGTIGYPLRTVETKL 441
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ +A ++ AN ++ + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEAEVEAAN-ENFESYERIKQFRVVPEEFSEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
YD
Sbjct: 645 SLIYD 649
>gi|448620307|ref|ZP_21667655.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
gi|445757095|gb|EMA08451.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
Length = 668
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 14/229 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E VR +A F LG+E V I+ EW +D + AGG +YT++
Sbjct: 64 DLTYEEMRGVVRRLAAGFRDLGIESADRVGILSHTRMEWAQTDFAVLGAGGVVTTVYTSS 123
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWD 317
S + L AN VVE+++ LE++L V+ + L+ IV +Y+G+ D+ V++
Sbjct: 124 SERQVQYLLSDPGANAVVVENEELLERVLAVEDEL-DLRFIVVIDEYDGRDDREDVLTLG 182
Query: 318 ELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
EL G DE + + L+ + +L+YTSGT G K V L+H N N +
Sbjct: 183 ELYRRGEDVYDEAAYESWLDERDPEDLASLIYTSGTTGRPKGVRLTHWNFRSNVNESYRR 242
Query: 377 F-----KLESAALS----VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
F K ++ + +SFLPL+H+ + + + AT+ +A+
Sbjct: 243 FGPRPDKGDTPVIGPDAVTLSFLPLAHVFERMAGHFMMFAAGATVAYAE 291
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ +V++A+G D +SG +S EL + ++ +PI E +G++E + +
Sbjct: 360 HRLADRLVFGQVREALG-DNIDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P++ K+ +G + +T++
Sbjct: 419 VNPPEEPKIGTIGYPLRTVETEL 441
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ +A +D AN ++ + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEAEVDAAN-ENFESYERIKQFRVVPEEFSEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
YD
Sbjct: 645 SLIYD 649
>gi|407770692|ref|ZP_11118059.1| AMP-dependent synthetase/ligase [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407286266|gb|EKF11755.1| AMP-dependent synthetase/ligase [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 606
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 10/213 (4%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A++ K+G+ V ++ N EW +DL + G YTTN+ LH +
Sbjct: 52 VRALARSLYKIGVRPGDRVLLVSENRTEWSIADLAIMCVGALTVPAYTTNTERDHLHAIE 111
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLK-AIVQYEGKPDKPGVIS---WDELMELGRAA 326
S A I ++ K + L + + AI+ + G I+ W++++ GR
Sbjct: 112 DSGAGIAIISTKKLAQPFLHAALDSGRCRHAIMMEDWGQSFVGDITITRWEDMISQGRGL 171
Query: 327 PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN---AACIIQYFKLESAA 383
D+ +D + I ++ L+YTSGT GA K VMLSH I N A II+ +E
Sbjct: 172 TDD-IDAWVANIERDQLACLIYTSGTGGAPKGVMLSHGAILSNCMGAFDIIETLGIEEEV 230
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPLSH T +Y M++ A +++A+
Sbjct: 231 F--LSFLPLSHSYEHTAGLYFPMSIGAQIYYAE 261
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++Q G R + +SG P++ EL F+S I I + +G +E A + + ++
Sbjct: 337 LLRRKLRQRFG-GRIKAMVSGGGPLNYELGVLFVSCGIRILQGYGQTEFAPVVSCNRAEN 395
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
KL VG + G + KI D +GEI L+
Sbjct: 396 NKLRTVGPPMVGAEAKIAD-----DGEILLR 421
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 424 KATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKF 483
K + A+D N + +S +K++ F F + FSI L P+MK++R + Y +D
Sbjct: 540 KKIRTAVDHVN-RRLSTIEKVRSFTFAESPFSIDNEMLTPSMKIRRHKIKAAYGQALDAL 598
Query: 484 Y 484
Y
Sbjct: 599 Y 599
>gi|330448784|ref|ZP_08312431.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492975|dbj|GAA06928.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 607
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
+ ++ +A A L+ GL+ V I N P W +D +Y +Y T++P+
Sbjct: 41 FGEQIQQLALALLRQGLQVQDKVGIFSNNMPRWTVADFATLYNRCITVPIYPTSTPQQAA 100
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELG 323
+ L + + V + Q++ +++ QCP+L+ IV P P +++ +
Sbjct: 101 YILQDASVKVLFVGEQAQMDAAVEIAEQCPQLERIVALSDDVVIPKHPLACHYNDFVNQA 160
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
A + LD L A ++ TL+YTSGT G K VML + NI Q L+
Sbjct: 161 SAEYQQELDARLAEQAMDDLITLIYTSGTTGTPKGVMLDYANIASQIEAHDQRLALDEGG 220
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
S + FLPLSH+ + Y + + +D N LK
Sbjct: 221 TS-LCFLPLSHVFERAWTFYVLHRGVVNCYLSDTNKLK 257
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++KF LP FS+ GEL PT K++R + +Y I++ Y+
Sbjct: 547 KDLARFEQVKKFTLLPKSFSMDHGELTPTQKLRRKVIQDRYHQEIERMYE 596
>gi|410941204|ref|ZP_11373003.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410783763|gb|EKR72755.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 682
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 41 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 99
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 100 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPASNSPGVLKMQELIERGKTL 159
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + ++ A
Sbjct: 160 RAGGSKKAEERIAAIHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKVGA 219
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 220 -RLLSILPIWHVFERVVEYVCIGLGAATYY 248
>gi|332293367|ref|YP_004431976.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
gi|332171453|gb|AEE20708.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
Length = 589
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY +++ L+LG++ + +I N EW D+G + G +Y T S E
Sbjct: 37 QEYIDQANAISRGLLRLGVKPNDKIAVISMTNRTEWNICDIGILQLGAQNVPIYPTISEE 96
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S++ V ++ +K++ +K + P L + +E D +W E++ELG
Sbjct: 97 DYAYVLNHSESKYVFVSCNEVRDKVMSIKDKVPSLIEVYSFE---DIDNCKNWSEVLELG 153
Query: 324 RAAPDESLDRVLET-IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
++S L+ + T + TL+YTSGT G K VMLSH+NI NA L
Sbjct: 154 ADTSNQSEVETLKAAVTTKDLATLIYTSGTTGRPKGVMLSHENIVSNALASAHRLPLADT 213
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ HI + + +Y +++FA+
Sbjct: 214 GMRALSFLPVCHIYERML-MYLYQYKGVSIFFAE 246
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TGVK+ + +A L+ Y Y + L R LI SK K+ +G + ++ SG+
Sbjct: 285 TGVKKKLFFWAVDLGLK-YEPYGQNGWWYEKQLALARKLIFSKWKEGLGGNLDLIA-SGS 342
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDP 194
A + L R F + ++ I E +G++E + +V+ D F++ VG+ +PG + KI +
Sbjct: 343 AALQPRLARIFNAAEMGIMEGYGLTETSPVCSVNDMRDGGFRIGTVGKLLPGVEVKIAN- 401
Query: 195 DEEGNGEICLK 205
+GEI +K
Sbjct: 402 ----DGEILVK 408
>gi|384098415|ref|ZP_09999531.1| putative long chain fatty-acid CoA ligase [Imtechella halotolerans
K1]
gi|383835672|gb|EID75095.1| putative long chain fatty-acid CoA ligase [Imtechella halotolerans
K1]
Length = 592
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 7/214 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY + +++ L+LG++ + +I N EW D+G + G +Y T S E
Sbjct: 38 EEYISQANAISRGLLRLGVKPNDKIAVISSSNRTEWNILDIGILQIGAQNVPIYPTISKE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S++ C V D + LEK+ +K LKA+ + D PG SW E++ LG
Sbjct: 98 EYEYILNHSESTYCFVSDSEILEKLNAIKVNT-HLKAVYTFN---DIPGEQSWKEILTLG 153
Query: 324 -RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
A+ E ++ ++ + TL+YTSGT G K VMLSH NI N + E+
Sbjct: 154 ADASNQEEVEARKNNVSPEDLATLIYTSGTTGTPKGVMLSHKNIVSNVLDSEKRVPFENG 213
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ H+ + + +Y ++FA+
Sbjct: 214 KSKGLSFLPVCHVFERMI-LYLYQYCGVEIYFAE 246
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+K+ + +A + L+ Y Y + ++ R LI SK ++ +G + +SG+A
Sbjct: 286 GIKKALFFWAINLGLR-YEPYGANGWWYEWQLKIARKLIFSKWQEGLG-GNLELMVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+ L R F + +PI E +G++E + V+ + FK+ VG+ I + KI +
Sbjct: 344 ALQPRLTRMFAAAGMPIMEGYGLTETSPVIAVNDQRNHGFKIGTVGKIIDNVEVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI +K
Sbjct: 402 ---DGEILVK 408
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 426 TQAAIDRANLK------SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
Q IDR ++ N +KI+ F P +SI G L PT+K+KR + +KY+++
Sbjct: 524 NQQVIDRIQMEVDTCNERFGNWEKIKTFRLTPDVWSIDEGHLTPTLKLKRKIIKEKYKTL 583
Query: 480 IDKFYD 485
D+ Y+
Sbjct: 584 YDQMYN 589
>gi|284044961|ref|YP_003395301.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
gi|283949182|gb|ADB51926.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
Length = 607
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 6/212 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E A V +A +LG+ R +V ++ N PE+ +DL + G +Y T+S
Sbjct: 45 LTWSELRARVDALAGGLARLGVGRGDNVALMLSNRPEFHLADLAVVTLGAAPFSIYLTSS 104
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK-PGVISWDELM 320
PE + + ++A + VVE L ++L+ + + P L ++ +G D G+++ L
Sbjct: 105 PEQIRYVVADAEARVAVVE-QAFLGRLLEARRELPLLAHVIVVDGTADAGEGLLA---LA 160
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
++ + P +D L + + TL+YTSGT G K V LSH +I C+ + +L+
Sbjct: 161 DVEGSDPSFDVDAALAAVEPGDVATLIYTSGTTGPPKGVELSHHSIFGAVRCVQEVIQLD 220
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
A VIS+LP +HIA + Y + AAT+
Sbjct: 221 PGA-RVISWLPAAHIAERAAHHYIPVVYAATI 251
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+ S ++ +GLD+ GAAP E+ +F +L I + E++GMSE GA TV+ P
Sbjct: 336 VFSGLRAMLGLDQVVTVNVGAAPTPPEVIEFFHALGIELAELWGMSETCGAGTVNRPGAV 395
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ VG PG + ++ + +GE+ ++
Sbjct: 396 RIGTVGPAAPGVEVRLAE-----DGELLMR 420
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 420 LKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTG-ELGPTMKVKRPFVVKKYQS 478
L V A QA +D AN + +S ++I++F + D+ +P G EL PTMK+KR + KYQ+
Sbjct: 541 LAVQAAVQAGVDAAN-ERLSRVEQIKRFTIVRGDW-LPGGDELTPTMKLKRRPISDKYQA 598
Query: 479 IIDKFY 484
I++ Y
Sbjct: 599 EIEQMY 604
>gi|398336768|ref|ZP_10521473.1| long-chain-fatty-acid CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 681
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQRQRVGLLADNRIEWIVADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLNNVKTLIMMDPASSAPGVLKMQDLIEKGKSL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + TL+YTSGT G K VML H N+ + K+++ A
Sbjct: 159 RAGGSKKAEERIAAIQPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNNVSPMLKIKADA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|343494337|ref|ZP_08732599.1| putative long-chain-fatty-acid-CoA ligase [Vibrio nigripulchritudo
ATCC 27043]
gi|342825242|gb|EGU59741.1| putative long-chain-fatty-acid-CoA ligase [Vibrio nigripulchritudo
ATCC 27043]
Length = 602
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K + V V+ A L G++ V I N PEW +D+ + G +Y TN+
Sbjct: 36 ISWKSFGEQVDAVSLALLSRGIDVQDKVGIYSNNMPEWTIADIATLQLRGVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDE 318
+ + +D + V + +Q + + V +CPKL+ +V D +SW
Sbjct: 96 AAQAAYIIDNADVKVLFVGEQEQYDAAMSVFHECPKLELVVAMTDDIVLEDGERSLSWAS 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+EL +P + L + LE + ++ TL+YTSGT G K VML++ NI +
Sbjct: 156 FIELAATSPTDELGKRLEEVELDDLLTLIYTSGTTGQPKGVMLTYANIASQLEGHDRRLG 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L + +S + FLPLSH+ + Y + A + D
Sbjct: 216 LTNQDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLKD 252
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L L+LSK++ +G R G A + + R+F ++ I + +GM+E T
Sbjct: 325 HKLADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA--T 381
Query: 169 VSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+S DD F D +G ++PG Q KI + +E G + +K Y AK F + G
Sbjct: 382 ISCWDDGTFNPDSIGTSMPGAQVKIGENNEILVRGPMVMKGYYKLPEETAKTFDEHGF 439
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFTLLPQAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
>gi|338975756|ref|ZP_08631105.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobiaceae bacterium
SG-6C]
gi|414168119|ref|ZP_11424323.1| hypothetical protein HMPREF9696_02178 [Afipia clevelandensis ATCC
49720]
gi|338231065|gb|EGP06206.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobiaceae bacterium
SG-6C]
gi|410888162|gb|EKS35966.1| hypothetical protein HMPREF9696_02178 [Afipia clevelandensis ATCC
49720]
Length = 609
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
V F LGL + V I+ N EW + LGA G G+Y T+ + L S+
Sbjct: 50 VGLGFRALGLNKGGHVAILSENRIEWVLAQLGANIVDGIVVGVYPTSPSNEVAYVLAHSE 109
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK------PDKPGVISWDELMELGRAAP 327
+ + V ED +Q++K+L+ + + PKL+ I+ E K PD+ V+S+D L LG A
Sbjct: 110 SEVIVCEDQEQVDKVLERRDELPKLQRIIVVETKGIRDYPPDQ--VMSFDALEALGAAFE 167
Query: 328 -------DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
D ++DR +T+A + ++YTSG+ G K MLS+ NI A + L
Sbjct: 168 TKYAGLVDTTIDR--QTLA--QIGLIIYTSGSTGKPKGAMLSYKNIRAQAIASVDRLSL- 222
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
S S++S+LPL H+A Q + + + + + F +
Sbjct: 223 SKDESLLSYLPLCHVAEQMTTVMVPVYLGSLVNFGE 258
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 55/97 (56%)
Query: 100 EKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFG 159
++ +SE + L WLI ++ +GL + R++++GAAPIS + +F ++ +P+ EV+G
Sbjct: 321 DRTLSEMIRFGLSYWLIFRALQNFIGLRKTRIAMTGAAPISPAIVHFFRTIGVPLIEVYG 380
Query: 160 MSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
++E +G D ++ VG I ++ D +E
Sbjct: 381 LTESSGIALGQVLTDRRVGTVGYGIALMDARLGDSNE 417
>gi|421113459|ref|ZP_15573903.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410801233|gb|EKS07407.1| AMP-binding enzyme [Leptospira santarosai str. JET]
Length = 681
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + VE+DK LEK + K+Q +K ++ + + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFVENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMRDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RANGSQKAEERIAAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|359685931|ref|ZP_09255932.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
Length = 681
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + VE+DK LEK + K+Q +K ++ + + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFVENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMRDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RANGSQKAEERIAAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|195579154|ref|XP_002079427.1| GD23949 [Drosophila simulans]
gi|194191436|gb|EDX05012.1| GD23949 [Drosophila simulans]
Length = 533
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 287 KILKVKAQCPKLKAIVQYEGKPD-----KPGVISWDELME--LGRAAPDESLDRVLETIA 339
K+ +K + P+LKA++Q G + +PG SW +L E +E L R I
Sbjct: 7 KLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLARE-SRIR 65
Query: 340 TNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-LESAALSVISFLPLSHIAAQ 398
NEC L++TSGT G K VMLSHDN+ F+ + + ++ S +S+LPLSH+AAQ
Sbjct: 66 ANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSASAHMQDIQVGKESFVSYLPLSHVAAQ 125
Query: 399 TVDIYSVMTVAATLWFADKNALK 421
D++ ++ A + FADK+ALK
Sbjct: 126 IFDVFLGLSHAGCVTFADKDALK 148
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 30/201 (14%)
Query: 114 WL---ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
WL ++ +++ +GLD CRV +G AP S ELK++FL LDI + E +GMSE +GA T++
Sbjct: 221 WLASRVVKPIREMIGLDNCRVFFTGGAPTSEELKQFFLGLDIALGECYGMSETSGAITLN 280
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVC 230
D L G+ G KI +PD G GEI ++ R V +L L + +V
Sbjct: 281 V-DISNLYSAGQACEGVTLKIHEPDCNGQGEILMRG-----RLVFMGYLGLPEKTDEAVK 334
Query: 231 IIGFNAPEWFYS-DLG-------AIYAGGFAAGMYTT---NSPEACLHCLVTSD----AN 275
G W +S DLG I +G + T N P + L+ + +N
Sbjct: 335 EDG-----WLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELIKKELPCVSN 389
Query: 276 ICVVEDDKQ-LEKILKVKAQC 295
+ ++ D ++ L +L +K +C
Sbjct: 390 VLLIGDHRKYLTVLLSLKTKC 410
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A + I RAN +ISNAQK+QKF + +FS+ TGELGPT+K++R V KY +I
Sbjct: 469 KLLEAIEEGIKRANKYAISNAQKVQKFALIAHEFSVATGELGPTLKIRRNIVHAKYAKVI 528
Query: 481 DKFY 484
++ Y
Sbjct: 529 ERLY 532
>gi|86142811|ref|ZP_01061250.1| probable long chain fatty-acid CoA ligase [Leeuwenhoekiella
blandensis MED217]
gi|85830843|gb|EAQ49301.1| probable long chain fatty-acid CoA ligase [Leeuwenhoekiella
blandensis MED217]
Length = 589
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 6/211 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
Y +++ LKLG++ + +I N EW D+G + G +Y T S E
Sbjct: 39 YLDQANAISRGLLKLGVKPNDKIAVISSTNRTEWNIMDIGILQLGAQNVPIYPTISEEEY 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
+ L S++ C V D++ L K+ +KA P LK + ++ G SW+E+ E +
Sbjct: 99 EYVLNHSESIYCFVSDEEVLTKVNAIKANVPTLKEVYSFDAIN---GCKSWEEVKEEDKT 155
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS 385
E ++++ + + ++ TL+YTSGT G K VMLSH N+ NA F +
Sbjct: 156 LQSE-VEKLKDAVKEDDLATLIYTSGTTGRPKGVMLSHKNVVSNAVNSASRFPIILGQSK 214
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ HI + + +Y +++FA+
Sbjct: 215 ALSFLPVCHIYERML-MYLYQYTGVSIYFAE 244
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + +A T L+ Y Y + + R LI SK ++A+G +V SG+
Sbjct: 283 TGIKKKLFFWAVETGLE-YEPYGQNGWWYEKKLGIARKLIFSKWQEALG-GNLKVIASGS 340
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDP 194
A + L R F + +I + E +G++E + +V+ D FK+ VGR IP T+ KI +
Sbjct: 341 AALQPRLARVFNAANIGVMEGYGLTETSPVISVNDMRDHGFKIGTVGRPIPETEVKIAE- 399
Query: 195 DEEGNGEICLK 205
+GEI +K
Sbjct: 400 ----DGEILIK 406
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K Q +D N K ++++KFE P ++SI G L PTMK+KR V +KY +
Sbjct: 524 EVKKRIQEDVDIHNEK-FGKWERVKKFELTPDEWSIEAGHLTPTMKLKRRIVKEKYLDLY 582
Query: 481 DKFYD 485
+K Y+
Sbjct: 583 NKIYE 587
>gi|418746716|ref|ZP_13303036.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|410792425|gb|EKR90360.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 682
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 41 YEQGIQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 99
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + VE+DK LEK + K+Q +K ++ + + PGV+ +L+E G
Sbjct: 100 YILNHSEVEVVFVENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMRDLIEKGKKL 159
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 160 RANGSQKAEERIAAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 219
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 220 -RLLSILPIWHVFERVVEYVCIGLGAATYY 248
>gi|423316667|ref|ZP_17294572.1| hypothetical protein HMPREF9699_01143 [Bergeyella zoohelcum ATCC
43767]
gi|405583008|gb|EKB56979.1| hypothetical protein HMPREF9699_01143 [Bergeyella zoohelcum ATCC
43767]
Length = 593
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCII-GFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+++ A ++ LKLG++ + +I EW DLGA G +Y T S E
Sbjct: 37 EQFIAKANQFSRGLLKLGIKPGDKIALITSATRTEWCVCDLGASQIGVVIVPVYPTISSE 96
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ S+ C + D+ LEK++KVK + P L+ + ++ + G +W E+++LG
Sbjct: 97 DYAYIFGNSEIKYCFLSDETLLEKVMKVKTEIPTLQGVFSFD---EIKGCANWKEVLDLG 153
Query: 324 -RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC----IIQYFK 378
+ + E ++ + I ++ T++YTSGT G K VMLSH NI N I +
Sbjct: 154 SQESGQEEVEAIRNIIKEDDLATIIYTSGTTGKPKGVMLSHKNIVSNVVASVPRIPRKSG 213
Query: 379 LESAALSVISFLPLSHIAAQTV 400
L++ V+SFLP+ HI + +
Sbjct: 214 LKNTDTVVLSFLPICHIFERMI 235
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 100 EKNVSEPYTYR--LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEV 157
+K +S+P + L L+ K ++ +G + + +SG+A +S L + F + IPI E
Sbjct: 306 KKGISKPSGLKEILADKLVFKKWREGLGGNIITL-VSGSAALSARLNKMFQNAGIPILEG 364
Query: 158 FGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+G++E + +V++ K+ VG + + KI+ +GEI +K
Sbjct: 365 YGLTETSPVISVNSFGRIKVGSVGHPLDNLEVKILS-----DGEIAVK 407
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 424 KATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKF 483
K + ID N K + ++++KFE P +SI G L PT+K+KR + ++Y + K
Sbjct: 529 KRLEREIDYLNTK-LGKWEQVKKFELTPEVWSIELGMLTPTLKLKRKAIKERYADLYQKM 587
Query: 484 Y 484
Y
Sbjct: 588 Y 588
>gi|440798551|gb|ELR19618.1| AMPbinding enzyme domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1462
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR V+ + LG+ I+ N EW LG++ AG A + TT++ L
Sbjct: 432 VRRVSSGLIALGMPPRARTAILSSNRLEWVAFCLGSMSAGAVPAALPTTSTTPETTRMLA 491
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK-PG--VISWDELMELGR--A 325
+ AN+ +VE +Q + +L + P+L+ +V +G P V++W +L+ G
Sbjct: 492 VAQANVVLVEKREQCDALLSQRQLFPRLRHVVLLDGSASGYPADLVLTWRQLLSKGTYGN 551
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS 385
+ L+ + + TL +TSGT G +K VMLSH N+ F+A I + ++ S
Sbjct: 552 VNNAEFQNRLQNLQPTDLATLAFTSGTTGQAKCVMLSHRNLMFSACAIGRLLAIKECD-S 610
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFADKNA 419
++SFLP +H+A Q + +Y + ++FA+ A
Sbjct: 611 LMSFLPFAHVAEQLLAVYVPVVARCRIYFAESTA 644
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
LS + AMG R R + + E+ L + I E +G +E G V++ + +
Sbjct: 689 LSALWTAMGFARVRYAACAYGYLPEEVSESLQKLQLTIHEAYGQTETCGLTAVNSSGNSQ 748
Query: 177 LDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNA 236
VG+ +P TQ KI + +G+I +K + + +G + + G+
Sbjct: 749 AGTVGKVLPNTQAKI-----DADGQILVKGHN----------VFMGYLSEEAGPVDGW-- 791
Query: 237 PEWFYSDLGAIYAGGF 252
W D G++ AGGF
Sbjct: 792 --WATGDHGSMDAGGF 805
>gi|332876876|ref|ZP_08444630.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332685159|gb|EGJ58002.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 597
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
++KA L+ G+ +V I+ N P+W +DL + +YT+N+ E L+ + ++
Sbjct: 48 LSKALLQQGVAPQQTVGILSQNTPQWTLTDLACLQIRAVTVPIYTSNTAEQALYVMNHAE 107
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELG-RAAPDE 329
V D+KQ K L+V QC L+ I+ ++ ++ I W + + G A DE
Sbjct: 108 IKFLFVGDEKQYLKALEVADQCLSLQKIILFDDHIQLKEQKYSIHWTDFLAFGNNNALDE 167
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISF 389
L + +++ ++ T++YTSGT G K VML+++N+ + Q +++ S +SF
Sbjct: 168 ELQQRIDSRDLSDLFTVIYTSGTTGEPKGVMLTYENLAYQMLGHSQRLEVDDTD-SSLSF 226
Query: 390 LPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
LPL+H+ + + + + D N ++
Sbjct: 227 LPLTHVYERAWTSFCLYKAIVVYYLEDTNLVR 258
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y ++ +K+K +G R + G A + + R+F S+ I + +GM+E +
Sbjct: 326 YNFFDKMVYTKLKAVLG-GRIKFMPCGGANLEPSIGRFFQSIGINVKLGYGMTETTATVS 384
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
+ F L VG +P Q +I + +E G + +K Y N AKAF G R
Sbjct: 385 CWGDNRFNLQSVGTLMPNVQVRIGEDNEILVKGGMVMKGYYKNPEETAKAFTPDGFLR 442
>gi|419965033|ref|ZP_14480982.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
gi|414569429|gb|EKT80173.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
Length = 603
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V VAK + LG+++ V ++ EW D AGG +Y T+
Sbjct: 45 DVTAAEFAAQVTAVAKGLIALGVQQGDRVALMSATRYEWPLVDFAIWAAGGVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE+ + V A+ L+ + Q E GV+ +EL
Sbjct: 105 SAEQVRWILEDSAAIDLVVENATHAATVKAVAAEATALRGVYQIEASDGGRGVV--EELT 162
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---F 377
ELG PD + + + +++ TL+YTSGT G K L+H N+ + I+
Sbjct: 163 ELGADVPDSEVQARVAALKSSDPATLIYTSGTTGRPKGCQLTHSNLIAESKGILDSSLGT 222
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYS 404
L++ +S + FLP++H+ A+ V I S
Sbjct: 223 LLKTPGVSTLMFLPMAHVLARAVSIAS 249
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G +C++++SG AP+ L +F + I I E +G++E + A
Sbjct: 331 HALFDKLVFSKLRAALG-GKCQLAISGGAPLGARLGHFFRGIGITIYEGYGLTETSAAFA 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYH 227
V+ + K+ VG+ + G +I D E +G + Y N A A
Sbjct: 390 VNTIGEQKVGSVGKPLAGNSVRIADDGEILLSGPVVFSGYWRNENATADAIEN------- 442
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGF 252
WF++ DLG++ A G+
Sbjct: 443 ----------GWFHTGDLGSVDADGY 458
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN K +S+A+ I+KF LP DF+ TGEL PTMK+KR V + I Y
Sbjct: 547 AVAEAN-KLVSHAEAIKKFRVLPVDFTEETGELTPTMKLKRNVVHDSFADDIAAIY 601
>gi|424858429|ref|ZP_18282461.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356662116|gb|EHI42415.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 603
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V VAK + LG+++ V ++ EW D AGG +Y T+
Sbjct: 45 DVTAAEFAAQVTAVAKGLIALGVQQGDRVALMSATRYEWPLVDFAIWAAGGVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE+ + V A+ L+ + Q E GV+ +EL
Sbjct: 105 SAEQVRWILEDSAAIDLVVENATHAATVKAVAAEATALRGVYQIEASDGGRGVV--EELT 162
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---F 377
ELG PD + + + +++ TL+YTSGT G K L+H N+ + I+
Sbjct: 163 ELGADVPDSEVQARVAALKSSDPATLIYTSGTTGRPKGCQLTHSNLIAESKGILDSSLGT 222
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYS 404
L++ +S + FLP++H+ A+ V I S
Sbjct: 223 LLKTPGVSTLMFLPMAHVLARAVSIAS 249
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G +C++++SG AP+ L +F + I I E +G++E + A
Sbjct: 331 HALFDKLVFSKLRAALG-GKCQLAISGGAPLGARLGHFFRGIGITIYEGYGLTETSAAFA 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYH 227
V+ + K+ VG+ + G +I D E +G + Y N A A
Sbjct: 390 VNTIGEQKVGSVGKPLAGNSVRIADDGEILLSGPVVFSGYWRNENATADAIEN------- 442
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGF 252
WF++ DLG++ A G+
Sbjct: 443 ----------GWFHTGDLGSVDADGY 458
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN K +S+A+ I+KF LP DF+ TGEL PTMK+KR V + I Y
Sbjct: 547 AVAEAN-KLVSHAEAIKKFRVLPVDFTEETGELTPTMKLKRNVVHVSFADDIAAIY 601
>gi|406673705|ref|ZP_11080926.1| hypothetical protein HMPREF9700_01468 [Bergeyella zoohelcum CCUG
30536]
gi|405586170|gb|EKB59962.1| hypothetical protein HMPREF9700_01468 [Bergeyella zoohelcum CCUG
30536]
Length = 593
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCII-GFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+++ A ++ LKLG++ + +I EW DLGA G +Y T S E
Sbjct: 37 EQFIAKANQFSRGLLKLGIKPGDKIALITSATRTEWCICDLGASQIGVVIVPVYPTISSE 96
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ S+ C + D+ LEK++KVK + P L+ + ++ + G +W E+++LG
Sbjct: 97 DYAYIFGNSEIKYCFLSDETLLEKVMKVKTEIPTLQGVFSFD---EIKGCANWKEVLDLG 153
Query: 324 -RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC----IIQYFK 378
+ + E ++ + I ++ T++YTSGT G K VMLSH NI N I +
Sbjct: 154 SQESGQEEVEAIRNIIKEDDLATIIYTSGTTGKPKGVMLSHKNIVSNVLASVPRIPRKSG 213
Query: 379 LESAALSVISFLPLSHIAAQTV 400
L++ V+SFLP+ HI + +
Sbjct: 214 LKNTDTVVLSFLPICHIFERMI 235
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 100 EKNVSEPYTYR--LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEV 157
+K +S+P + L L+ K ++ +G + + +SG+A +S L + F + IPI E
Sbjct: 306 KKGISKPSGLKEILADKLVFKKWREGLGGNIITL-VSGSAALSARLNKMFQNAGIPILEG 364
Query: 158 FGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+G++E + +V++ K+ VG + + KI+ +GEI +K
Sbjct: 365 YGLTETSPVISVNSFGRIKVGSVGHPLDNLEVKILS-----DGEIAVK 407
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 424 KATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKF 483
K + ID N K + ++++KFE P +SI G L PT+K+KR + ++Y + K
Sbjct: 529 KRLEREIDYLNTK-LGKWEQVKKFELTPEVWSIELGMLTPTLKLKRKAIKERYADLYQKM 587
Query: 484 Y 484
Y
Sbjct: 588 Y 588
>gi|153003836|ref|YP_001378161.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. Fw109-5]
gi|152027409|gb|ABS25177.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. Fw109-5]
Length = 607
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 9/240 (3%)
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLER 225
AH + P+ F L+ VG+T + P + G + + EA VR +A LG+E
Sbjct: 5 AHPRNVPELF-LERVGKTPAAEAFRY--PIDGGWRSLTWSDTEARVRAIASGLRALGVED 61
Query: 226 YHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQL 285
I+ EW SD G + AG + +Y ++ E C L S + E+D+Q+
Sbjct: 62 EQVCAILSSTRVEWTLSDFGVLCAGAATSTIYPSSVAEECAFILSDSGTVVAFAENDEQV 121
Query: 286 EKILKVKAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR----AAPDESLDRVLETIAT 340
K+ +A+ P L+ +V ++G+P G V++ EL E GR A P E +R I
Sbjct: 122 AKLASRRAELPALRHVVTFDGRPSADGWVMTLGELEERGRAWDAAHPGEFEERA-AAIRG 180
Query: 341 NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTV 400
+ TL+YTSGT G K V L+H + + L + +LPL+H+ + +
Sbjct: 181 DALATLIYTSGTTGRPKGVELTHACWVAQSKSVEDTGILSHPDPLQLFWLPLAHVFGKMI 240
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ KV+ G R R +SG+AP+S ++ +F ++ I I E +G++E + A V+ P
Sbjct: 335 LVFQKVRALFG-GRLRFFVSGSAPLSKDVAEFFDAMGIVILEGYGLTESSAATHVNLPWR 393
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG +PG KI + +GEI ++
Sbjct: 394 RKIGTVGPALPGVDVKIAE-----DGEILMR 419
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + Q A+D+ N + +++F LP +FS GE+ P+ K+KR + ++Y++ +
Sbjct: 538 KVRRLVQDAVDQLN-AGLPRFAAVKRFTVLPREFSEAEGEVTPSQKLKRKVIEERYRAEL 596
Query: 481 DKFY 484
D Y
Sbjct: 597 DAMY 600
>gi|197121932|ref|YP_002133883.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. K]
gi|196171781|gb|ACG72754.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. K]
Length = 604
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 23/242 (9%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E R VA LGL V IIG EW +DLG + AGG +Y +N
Sbjct: 44 DVSWAEMARRARDVADGLAALGLRAGDRVAIIGDTNLEWILADLGILGAGGITVTIYQSN 103
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDE-L 319
+P C + L S A + Q+ KI +V+A+ P L+ +V+ +G P +++ L
Sbjct: 104 TPAECQYILADSGARFVFCDSAAQVAKIREVRAKLPALEGLVRAQG----PAADAFERTL 159
Query: 320 MELGRAA-------PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
++ RA PD R L I ++ + +YTSGT G K V+L+H N + A
Sbjct: 160 ADVERAGVAWRASNPDAHAAR-LARIGRDDPASFIYTSGTTGNPKGVVLTHGNWVYEALA 218
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDR 432
++ K+ ++ FLP++H A+ ++ +WF+ ++ + +D
Sbjct: 219 -VEGLKVVRPDDLILMFLPMAHSFAKVIE---------AVWFSTGATGAFVESLEKIVDN 268
Query: 433 AN 434
A
Sbjct: 269 AG 270
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q ID N + S A I+KFE LP DF+ TGEL PT+KVKR V ++Y++++D FY
Sbjct: 546 QQTIDALNARQASYAT-IKKFEILPRDFTQATGELTPTLKVKRKVVTQQYRALLDSFY 602
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 128 RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGT 187
R R+ +SG AP+S ++ +F L I E +G++E + V+ P ++ VG +PGT
Sbjct: 353 RMRLFVSGGAPLSPKIAHFFDQLGFVILEGYGLTETSAGTFVNRPGANRIGTVGPPVPGT 412
Query: 188 QTKIVDPDE-EGNGEICLKEYEAN 210
+ +I + E G +KEY N
Sbjct: 413 EVRIAEDGEILVRGPCVMKEYYNN 436
>gi|403737820|ref|ZP_10950548.1| long-chain-fatty-acid--CoA ligase FadD [Austwickia chelonae NBRC
105200]
gi|403191932|dbj|GAB77318.1| long-chain-fatty-acid--CoA ligase FadD [Austwickia chelonae NBRC
105200]
Length = 602
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 212 RTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVT 271
R +A A ++ G+ V + N+PEW +DLG + AG +Y T+SPE H L
Sbjct: 44 RHIANALVRAGIAPGDRVAVFAGNSPEWTLADLGIMTAGAITVTIYQTSSPEQVRHILAD 103
Query: 272 SDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK-----PGVISW---DELMELG 323
S A I V + ++ V+ + P+LK + + PG+I D L +
Sbjct: 104 SGAAIVFVGSAAEARRLAPVREELPELKKVFSLSTSAEDVENAPPGLIDGTLADLLAQPT 163
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+++ L T+ + T+VYTSGT G K V LSH NI + + F L S
Sbjct: 164 DPEVASTVEAHLRTMGHDTLATIVYTSGTTGEPKGVCLSHGNILAEVLAMKERFHL-SPG 222
Query: 384 LSVISFLPLSHI 395
L + FLPLSH+
Sbjct: 223 LRSMCFLPLSHV 234
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 415 ADKNALKVYKATQAAIDR---ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPF 471
+D+NAL + QA ++ A + ++ ++IQKF LP D S+ +GE+ PT+KVKR
Sbjct: 523 SDRNALVHHPDVQALYEQKVTAAGQGMARHEQIQKFRLLPGDLSVDSGEITPTLKVKRRI 582
Query: 472 VVKKYQSIIDKFY 484
V + + +I+ Y
Sbjct: 583 VAEHFAHLIEDMY 595
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 70 VTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVR------WLILSKVKQA 123
V ++ TGVKR + ++A T + + + L+ L+L +V+ A
Sbjct: 284 VAHEQAGTGVKRKVFDWAVRTG---FATQSRRRAGKSVPAHLLAANAIADRLVLHRVRDA 340
Query: 124 MGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRT 183
+G + R+ SG A E+ +FL+ D+ + E +G++E A + ++ ++ VGR
Sbjct: 341 VGGPK-RLMASGGAATRREVIEFFLAADLEVYEGYGLTETAPMVSCNSVGQVRIGSVGRP 399
Query: 184 IPGTQTKIVDPDEEGNGEICLK 205
IP + +I D NGEI ++
Sbjct: 400 IPRCEVRIAD-----NGEILVR 416
>gi|224368113|ref|YP_002602276.1| protein AcsL2 [Desulfobacterium autotrophicum HRM2]
gi|223690829|gb|ACN14112.1| AcsL2 [Desulfobacterium autotrophicum HRM2]
Length = 556
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
KE+ VAK + LG++R + I N PEW Y+ G+ G + T+
Sbjct: 41 FKEFRGVCDKVAKGLMALGIQRGEKIAIWANNVPEWVYTQYGSARMGAVLVTVNTSYKSA 100
Query: 264 ACLHCLVTSDANICVV-----EDDKQLEKILKV----------KAQCPKLKAI--VQYEG 306
+ L SD+ ++ D+ ++ I KV K +C KL + + Y G
Sbjct: 101 ELEYLLEQSDSTTLILMGGVRTPDEYIKTINKVCPELKDSEPGKTKCKKLPFLKNLIYLG 160
Query: 307 KPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI 366
K PG+ +WDE+ME+G+A D+ L + L ++ ++ + YTSGT G K VMLSH N+
Sbjct: 161 KDKIPGMYNWDEIMEMGKAVSDDDLQKRLASLEPDDVINMQYTSGTTGFPKGVMLSHTNL 220
Query: 367 TFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
NA + + L I +P H + M AT+
Sbjct: 221 IGNAKSMAECMNLTPDDAMCIP-VPFFHCFGCVIGTLCCMVSGATM 265
>gi|162449173|ref|YP_001611540.1| hypothetical protein sce0903 [Sorangium cellulosum So ce56]
gi|161159755|emb|CAN91060.1| unnamed protein product [Sorangium cellulosum So ce56]
Length = 598
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 8/224 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +EY V +A G + I+ +N P+W + DL A+ GG +AG+Y ++
Sbjct: 32 LTAREYRDRVHHLALFLESRGFDASQVGAILSYNCPQWVHVDLAALLVGGKSAGLYPNST 91
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCP---KLKAIVQYEGKPD-KPGVISWD 317
+ + L ++A + V++ + +KI K + + I+ ++G P IS++
Sbjct: 92 AKDIQYILNHTEATLLSVQNKEYFQKISGEKGEYSVPDSVSWILVFDGDTSISPKAISYE 151
Query: 318 ELMELGRAAPDE----SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+ + GRA + + L I L+YTSGT G K MLSHDN+ + A
Sbjct: 152 QALAEGRALAGQPGAKTFADYLAKIDPRAGAFLIYTSGTTGNPKGAMLSHDNLAYTADMA 211
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
++Y+ L A ++ SFLPL HIA + + + +T T+ F K
Sbjct: 212 VKYWNLPFARGTMFSFLPLCHIAEKLQCVGAGLTQRYTVNFCSK 255
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 110 RLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV 169
+L L+L KV+ A+GL + V SGAA ++ + +F +L + I E FG +E G +
Sbjct: 329 KLADKLVLGKVRAALGLGKAEVLASGAAALAPHISTWFRALGLEILEDFGQTESTGVICM 388
Query: 170 SAPDDFKLDGVGRTIPGTQTKIVDPDE 196
+ P VG+ +PG + K+ + E
Sbjct: 389 TEPGIESAGTVGKPVPGVEFKLAEDGE 415
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%)
Query: 438 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+++ ++I++F L +FS+ GE+ PT+K+KR + ++++ ID+ Y
Sbjct: 549 LASFEQIKRFTVLGREFSVQDGEMTPTLKMKRNVIEQRFRGTIDEMY 595
>gi|448363818|ref|ZP_21552413.1| AMP-dependent synthetase and ligase [Natrialba asiatica DSM 12278]
gi|445645402|gb|ELY98406.1| AMP-dependent synthetase and ligase [Natrialba asiatica DSM 12278]
Length = 680
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 19/254 (7%)
Query: 182 RTIPGTQTKIVDPDEEGNG--EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEW 239
R++ GT + V P E + I E VR +A F LG+E V I EW
Sbjct: 46 RSLTGTDSDAVLPPAEPDAFRAISYAEMRDIVRNLAAGFRDLGVESGDRVGIFSNTRMEW 105
Query: 240 FYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLK 299
+D + AG +YT++SPE + L DA+ VVE+ + LE++L V+ + +L+
Sbjct: 106 AQTDFALLGAGAVVTTVYTSSSPEQVSYLLDDPDADGVVVENRELLERVLAVEDEL-ELE 164
Query: 300 AIVQYEGKP-----DKPGVISWDELMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTE 353
IV + P D+ V++ EL + G A D E+ ++ A ++ +L+YTSGT
Sbjct: 165 FIVSIDELPGTEYDDRDDVLTLAELHDRGAAVFDAETYQEWVDEPAVDDLASLIYTSGTT 224
Query: 354 GASKPVMLSHDNITFNAACIIQYFK----------LESAALSVISFLPLSHIAAQTVDIY 403
G K V L+H N N I + F + A +S+LPL+H+ +T +
Sbjct: 225 GQPKGVRLTHSNFRANVNQIRKRFAPRPDRDADVPVIDAESQAMSYLPLAHVFERTAGHF 284
Query: 404 SVMTVAATLWFADK 417
+ A + +A+
Sbjct: 285 LLFASGACVAYAEN 298
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V++ Q +DRAN + I++FE +P +F+ L PTMK KR ++ +++ +
Sbjct: 615 RVHEYVQREVDRAN-DGFEKHETIKRFELVPVEFTEKNEMLTPTMKKKRRVILDRFEGRV 673
Query: 481 DKFYD 485
D+ Y+
Sbjct: 674 DRIYE 678
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + + +SG +S EL R + ++ +PI E +G++E + V+ PDD
Sbjct: 372 LVFSTVREALGGE-IEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVIAVNPPDD 430
Query: 175 FKLDGVGRTIPGTQTKI 191
++ +G T+ I
Sbjct: 431 PRIGTIGPTVTDVDVSI 447
>gi|395768600|ref|ZP_10449115.1| acyl-CoA synthetase [Streptomyces acidiscabies 84-104]
Length = 598
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V AK + G+E V ++ EW D AG +Y T+
Sbjct: 45 DVTATEFLAEVHAAAKGLIAAGVEPGDRVALMSRTRYEWTLLDFAIWSAGAVTVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A CVVE D + V+A P+LK + Q EG GV +EL
Sbjct: 105 SPEQIGWILSDSGATACVVELDTHTAAVESVRASLPELKHVWQIEGG----GV---EELG 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
LGR D ++D ++ T+VYTSGT G K +L+H + +++ +
Sbjct: 158 RLGRDVTDATVDERSAQAKADDPATIVYTSGTTGRPKGCVLTHRSFFAECGNVVERLRPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLPL+H+ + V I +M
Sbjct: 218 FRTGECSVLLFLPLAHVFGRLVQIAPMM 245
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ +G R ++SG AP+ L +F + + E +G++E A + D
Sbjct: 332 LVYSKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATAFNPWDR 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ +PG+ +I D E +GE KEY N A+A
Sbjct: 391 QKIGTVGQPLPGSVVRIADDGEVLLHGEHLFKEYWNNPAATAEAL--------------- 435
Query: 234 FNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVK 292
A WF++ D+G + G+ + T + + + V+ED +++
Sbjct: 436 --ADNWFHTGDIGTLDEDGY---LSITGRKKEIIVTAGGKNVAPAVIED--------RIR 482
Query: 293 AQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
A + +V +G+P +++ D+ LGR A +
Sbjct: 483 AHALVAECMVVGDGRPFVAALVTIDDEF-LGRWASEHG 519
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q A+D N ++S A+ ++KF L + F+ +G L P++K+KR V K Y + I+ Y
Sbjct: 540 QTAVDDGN-AAVSKAESVRKFRILSSQFTEDSGHLTPSLKLKRNVVAKDYAAEIEALY 596
>gi|381165792|ref|ZP_09875019.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
gi|380685282|emb|CCG39831.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
Length = 612
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 22/243 (9%)
Query: 212 RTVAKAFLKL--GLERY-----HSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
R VA L L GLER V +IG N PEW +DL + G YTTN+
Sbjct: 41 RAVADEVLALSAGLERLGVTAGDRVALIGENRPEWAIADLAIMATGAITVPAYTTNTVAD 100
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP--GVI--SWDELM 320
H L S A + +V ++L A+ ++ + +P G++ SWDE+M
Sbjct: 101 HRHILDNSGAKLAIVSTPALAHRVLAAAAEASARPGVIVIDPPFAEPPEGIVRHSWDEVM 160
Query: 321 ELGRAAPDESLDRV-LETIATNECCTLVYTSGTEGASKPVMLSHDNITFN---AACIIQY 376
LGRA+ E+ R + + + +++TSGT G K VMLSH I N AA ++
Sbjct: 161 ALGRASGAEAHVRARVAGLRRDHTACIIHTSGTGGVPKGVMLSHGAILHNCYGAAVLVDD 220
Query: 377 FKLESAALSV-ISFLPLSHIAAQTVDIYSVMTVAATLWFADK------NALKVYKATQAA 429
V +SFLPLSH T ++ +++ AT+++AD N L+V A
Sbjct: 221 LNGGVHCDEVFLSFLPLSHAYEHTAGLFLPISIGATIYYADSIEHLSANMLEVRPTIMTA 280
Query: 430 IDR 432
+ R
Sbjct: 281 VPR 283
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 110 RLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV 169
R++ ++ K++ G R + +SG AP+ E+ R+FLSL + I + +G +E A +V
Sbjct: 333 RVLDRVVRDKIRDRFG-GRLKAFVSGGAPLPPEVGRFFLSLGVTILQGYGQTEAAPVISV 391
Query: 170 SAPDDFKLDGVGRTIPGTQTKI-VDPDEEGNGEICLKEYEANVRTVAKAF 218
+ P +++ VG I G + +I D + GE+ ++ Y + + A A
Sbjct: 392 NRPGRVRVESVGPVIEGVEIRIAADGEILVRGEMVMQGYWQDPASTAAAI 441
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
A+++ N ++ ++I++F L FS+ G L PTMK++R + + + +I+D Y+
Sbjct: 543 AVEQVN-AHLAPVERIRRFTVLAEPFSVENGLLTPTMKIRRHLIRESHAAILDGMYE 598
>gi|456863005|gb|EMF81517.1| AMP-binding enzyme [Leptospira weilii serovar Topaz str. LT2116]
Length = 648
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 7 YEQGIQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAVDVPRGTDITDSEIV 65
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 66 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPMSASPGVLKMQDLIEKGKKL 125
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 126 RAGGSKKAEDRISAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 185
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 186 -RLLSILPIWHVFERVVEYVCIGLGAATYY 214
>gi|388566224|ref|ZP_10152689.1| AMP-dependent synthetase and ligase [Hydrogenophaga sp. PBC]
gi|388266558|gb|EIK92083.1| AMP-dependent synthetase and ligase [Hydrogenophaga sp. PBC]
Length = 618
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A + LG + I+ EW +DL + AGG A G+Y T++PE +
Sbjct: 60 VREIAHGLMALGFAPKDTASILSNTTIEWVLADLAVLSAGGVANGIYPTDAPEQVHYLCE 119
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAI--VQYEGKPD--KPGVISWDELMELGR-- 324
S + ED++QL+K L V+ Q P LK I V EG D VIS D L LGR
Sbjct: 120 DSRTTVLFAEDEEQLDKALAVRDQLPLLKKIVVVDMEGLRDFHDEQVISLDALRTLGREH 179
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
A L++ + + ++ LVYTSGT G K M SH + + +
Sbjct: 180 LAQHPHMLEQRVAGVNPDDLAILVYTSGTTGKPKGAMHSHKGLVYTVRGYNTLIARDEND 239
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ FLPL HIA + Y + A L F +
Sbjct: 240 -ECMCFLPLCHIAERMGGEYFSLYTGARLNFVEN 272
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L R L+L V++ +G+ R R ++GAAPIS EL R++L+L +P+ EV+GM+E GA T
Sbjct: 345 FKLARLLVLDNVRKLIGIHRSRFLVTGAAPISPELVRWYLALGVPMLEVWGMTETCGAST 404
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K +G P Q V D + GEI ++
Sbjct: 405 GVPAQRIKPGSIG---PAAQYNEVKLDPQ-TGEILVR 437
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q ID N K + ++I+KF L + EL PTMK+KR V KKY I
Sbjct: 555 EVQQLIQTLIDATNRK-FARVEQIKKFWLLDTQLTAEDEELTPTMKLKRKLVQKKYAEQI 613
Query: 481 DKFY 484
+ Y
Sbjct: 614 EAMY 617
>gi|333370495|ref|ZP_08462494.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
gi|332977723|gb|EGK14486.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
Length = 611
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 10/246 (4%)
Query: 196 EEGNG--EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
+EG G I +E VR A LG+ V I+ N P W +DL +
Sbjct: 27 KEGGGYRSITYREMWEQVRETAAGLAHLGVGHGDKVAILSNNNPMWPVTDLAVASLAAVS 86
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y T + + L +D VVE+D QL KI A+ + G + GV
Sbjct: 87 VPIYPTLTAAQTGYILKNADCRTAVVEEDDQLRKIRSTDAEVSHHIVMKPAPGFSEGEGV 146
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+S+D L + GR P + + + I ++ T+++TSGT G K ML+H N+ N
Sbjct: 147 LSFDSLRKAGREHPRKDWEDGWKNIGGDQLFTIIHTSGTTGPPKGAMLTHRNLLANTEG- 205
Query: 374 IQYFKLESAALSV-ISFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNALKVYKAT 426
+Q++ +E V +S+LPLSH+ + + + AT+ +A+ +N L+V
Sbjct: 206 VQFWIVELVPGDVCLSYLPLSHVFERMAGQFVPLREGATIAYAESIDTIQENLLEVRPTV 265
Query: 427 QAAIDR 432
+ R
Sbjct: 266 MTTVPR 271
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 40 SVPGLLGRTAAQYPDQVALCQKQENGEWKKVTYKLQTTGVKRWIANYAKSTSLQHYMAYL 99
+VP LL + A+ +Q+A + +KR I N+A + Y ++
Sbjct: 268 TVPRLLEKIYAKVQEQIA-----------------SASPLKRKIFNWAVDVGHRRYEGFI 310
Query: 100 E-------KNVSEPYTYR----LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
+ K + P R L L+ K+K+ +G R R +SGAAP++ E+ R+F
Sbjct: 311 DARMDLLLKGEAIPSDLRRQFALADRLVFRKIKERVG-GRLRGLVSGAAPLNQEIARFFW 369
Query: 149 SLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKI 191
S+DIP+ E +G++E + + K+ VG+ +P + KI
Sbjct: 370 SIDIPVLEGYGLTEASPVIAANPMMRSKIGTVGKPLPNLEVKI 412
>gi|111018134|ref|YP_701106.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110817664|gb|ABG92948.1| probable long-chain-fatty-acid--CoA ligase [Rhodococcus jostii
RHA1]
Length = 603
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V VAK + LG+++ V ++ EW D AGG +Y T+
Sbjct: 45 DVTAAEFAAQVTAVAKGLIALGVQQGDRVALMSATRYEWPLVDFAIWAAGGVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE+ + V A+ L+ + Q E GV+ +EL
Sbjct: 105 SAEQVRWILEDSAAIDLVVENATHAATVKAVAAEATALRGVYQIEASDGGRGVV--EELT 162
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---F 377
ELG PD + + + +++ TL+YTSGT G K L+H N+ + I+
Sbjct: 163 ELGADVPDAEVRARVAALKSSDPATLIYTSGTTGRPKGCQLTHSNLIAESKGILDSSLGT 222
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYS 404
L++ +S + FLP++H+ A+ V I S
Sbjct: 223 LLKTPGVSTLMFLPMAHVLARAVSIAS 249
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G +C++++SG AP+ L +F + I I E +G++E + A
Sbjct: 331 HALFDKLVFSKLRAALG-GKCQLAISGGAPLGARLGHFFRGIGITIYEGYGLTETSAAFA 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
V+ + K+ VG+ + G +I D +GEI L
Sbjct: 390 VNTIGEQKVGSVGKPLAGNSVRIAD-----DGEILL 420
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN K +S+A+ I+KF LP DF+ TGEL PTMK+KR V + I Y
Sbjct: 547 AVAEAN-KLVSHAEAIKKFRVLPVDFTEETGELTPTMKLKRNVVHDSFADDIAAIY 601
>gi|397730388|ref|ZP_10497147.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396933780|gb|EJJ00931.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 603
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V VAK + LG+++ V ++ EW D AGG +Y T+
Sbjct: 45 DVTAAEFAAQVTAVAKGLIALGVQQGDRVALMSATRYEWPLVDFAIWAAGGVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE+ + V A+ L+ + Q E GV+ +EL
Sbjct: 105 SAEQVRWILEDSAAIDLVVENATHAATVKAVAAEATALRGVYQIEASDGGRGVV--EELT 162
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---F 377
ELG PD + + + +++ TL+YTSGT G K L+H N+ + I+
Sbjct: 163 ELGADVPDAEVRARVAALKSSDPATLIYTSGTTGRPKGCQLTHSNLIAESKGILDSSLGT 222
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYS 404
L++ +S + FLP++H+ A+ V I S
Sbjct: 223 LLKTPGVSTLMFLPMAHVLARAVSIAS 249
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G +C++++SG AP+ L +F + I I E +G++E + A
Sbjct: 331 HALFDKLVFSKLRAALG-GKCQLAISGGAPLGARLGHFFRGIGITIYEGYGLTETSAAFA 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
V+ + K+ VG+ + G +I D +GEI L
Sbjct: 390 VNTIGEQKVGSVGKPLAGNSVRIAD-----DGEILL 420
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN K +S+A+ I+KF LP DF+ TGEL PTMK+KR V + I Y
Sbjct: 547 AVAEAN-KLVSHAEAIKKFRVLPVDFTEETGELTPTMKLKRNVVHDSFADDIAAIY 601
>gi|408677510|ref|YP_006877337.1| Long-chain-fatty-acid--CoA ligase [Streptomyces venezuelae ATCC
10712]
gi|328881839|emb|CCA55078.1| Long-chain-fatty-acid--CoA ligase [Streptomyces venezuelae ATCC
10712]
Length = 598
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ KE+ A VR AK + G+E V ++ EW D AGG +Y T+
Sbjct: 45 DVTAKEFLAEVRGAAKGLIAAGVEPGDRVALLSRTRYEWVLLDFAIWSAGGVTVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A + +VE E ++ V+ P LK I Q E + +L+
Sbjct: 105 SPEQIQWILGDSGATLVLVESAAHQEAVVSVQGNLPDLKGIWQIEDD-------AVAQLI 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
G DE LD + ++ T+VYTSGT G K +L+H +++ K
Sbjct: 158 GTGLDVSDELLDERMSAANADDPATIVYTSGTTGRPKGCVLTHRAFFAECGNVVERLKPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLP +H+ + V++ SVM
Sbjct: 218 FRTGECSVLLFLPAAHVFGRLVEVASVM 245
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+++ L+ SK++ +G R ++SG AP+ L +F + + E +G++E A
Sbjct: 326 HKIFDKLVFSKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATA 384
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYH 227
+ D K+ VG+ +PG+ +I D E +GE Y N A+A
Sbjct: 385 FNPWDRQKIGTVGQPLPGSVVRIADDGEVLLHGEHIFSRYWNNEAATAEAL--------- 435
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLE 286
A WF++ D+G + G+ A T + L + V+ED
Sbjct: 436 --------ADGWFHTGDIGTLDEDGYLA---ITGRKKEILVTAGGKNVAPAVIED----- 479
Query: 287 KILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
+++A + +V +G+P +++ DE LGR A +
Sbjct: 480 ---RIRAHALVAECMVVGDGRPFVGALVTIDEEF-LGRWASEHG 519
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 407 TVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMK 466
+ AATL ++ + Q AID N ++S A+ ++KF LPA F+ G + P++K
Sbjct: 524 STAATL----RDDADLVAEVQRAIDDGN-AAVSKAESVRKFRILPAQFTEEAGHITPSLK 578
Query: 467 VKRPFVVKKYQSIIDKFY 484
+KR V K + I+ Y
Sbjct: 579 LKRNVVAKDFADEIEAIY 596
>gi|386074346|ref|YP_005988663.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|353458135|gb|AER02680.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 681
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V ++ N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + + PGV+ EL+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELIEKGKAL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + L+YTSGT G K VML H N+ + +++ A
Sbjct: 159 RAGGSKKAEERIAAIDPEDLFALIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|421097955|ref|ZP_15558632.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410799027|gb|EKS01110.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 681
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLANVKTLIMMDPMSTSPGVLKMQDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RAGGSRKAEERVSAINSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIIYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|393780807|ref|ZP_10369013.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392607921|gb|EIW90787.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 590
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
EY V TV++ L+LG+E+ + +I N EW D+G + G +Y T + E
Sbjct: 39 EYIQKVNTVSRGLLRLGIEKNDKIAVISSTNRTEWHVLDIGILQVGAQNVPIYPTINLED 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L S+ CVV D + EKI ++ + P LK I + D P W E+++LG
Sbjct: 99 FEYILNHSECKYCVVSDKELWEKISSIQDKLPHLKTIFTFN---DVPYAHHWQEILDLGA 155
Query: 325 AAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+++ ++ E+I ++ T++YTSGT K VMLSH NI N + S
Sbjct: 156 DESNQAEVEARKESIQKDDLATIIYTSGTTSRPKGVMLSHWNIISNILNCQDRLPI-SEG 214
Query: 384 LSVISFLPLSHI 395
+ +SFLP+ H+
Sbjct: 215 STALSFLPVCHV 226
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+KR + +A + Q Y Y + ++ R LI SK ++A+G R ++ +SG+A
Sbjct: 286 GIKRKLFFWALNLGFQ-YEPYGANGAWYQFKLKIARKLIFSKWREALG-GRIQMIVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+S L + F + + I E +G++E A V+ +K+ VG+ I KI +
Sbjct: 344 ALSPRLAKVFSAAGLKIMEGYGLTETAPVIAVNRESGRFWKIGTVGKPIVNIDVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI +K
Sbjct: 402 ---DGEILVK 408
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 426 TQAAIDR--ANLKSISNA----QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
QA DR ++ ++N ++++ F+F P +++I G L PT+K+KR + +KY I
Sbjct: 524 NQAVHDRIAKEVEKVNNHLGKWEQVKLFDFTPDEWTIDGGHLTPTLKLKRRVIKEKYIDI 583
Query: 480 IDKFYD 485
+KFY+
Sbjct: 584 YNKFYN 589
>gi|319652081|ref|ZP_08006201.1| hypothetical protein HMPREF1013_02813 [Bacillus sp. 2_A_57_CT2]
gi|317396229|gb|EFV76947.1| hypothetical protein HMPREF1013_02813 [Bacillus sp. 2_A_57_CT2]
Length = 635
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 184 IPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSD 243
I G+Q + + + EI + + V+ + LGL+R + IIG N PEW S+
Sbjct: 15 INGSQVALREKEFGIWNEITYEAFLEKVKNFSLGLASLGLKREDKLAIIGDNRPEWVISE 74
Query: 244 LGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ 303
L GG + G+Y + + + DA I V ED +Q++K++++K PK++ I+
Sbjct: 75 LAVQSLGGISVGIYQESLSAELSYIIDNCDATIIVAEDQEQVDKLMEIKDSIPKVRTIIY 134
Query: 304 YEGKPDKP----GVISWDELMELGRAAPDESLDRVLETI---ATNECCTLVYTSGTEGAS 356
Y+ + + + ++E++++G++ E D + + ++ L YTSGT G
Sbjct: 135 YDSRGMRSYREDFLFEFEEVLQMGQSCHSEQPDLFSQEVDKGTADDVAILSYTSGTTGNP 194
Query: 357 KPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
K ML++ N+ A + L +SFLPL+ I Q +MT+A L+
Sbjct: 195 KGTMLTYRNLLDMAKNLSDIDPLTDKD-EYVSFLPLAWIGEQ------MMTLAMGLY 244
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 73 KLQTTG-VKRWIANYAKSTSLQHYMAYL-EKNVS--EPYTYRLVRWLILSKVKQAMGLDR 128
++Q +G +KR I N+ K + A+ K VS Y++ +++ S ++ GL +
Sbjct: 287 RIQDSGWLKRKIYNWCKPIGEKVAKAHFGNKPVSAGTKALYKIADYVMFSAIRDHFGLLK 346
Query: 129 CRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQ 188
+ + +G AP+ ++ +F S+ + + ++G +E AG V D KLD VG IPGT+
Sbjct: 347 IKRAYTGGAPLGPDVFEFFHSIGVNVKSIYGQTEVAGISIVHRDGDIKLDSVGIPIPGTE 406
Query: 189 TKIVDPDEEGNGEICL----------KEYEANVRTVAKAFLKLG 222
KI D GEI + K ++ + T+ + +L G
Sbjct: 407 VKISD-----EGEILIRSSSVCKGYYKNEKSTIETIQEGWLHTG 445
>gi|220936214|ref|YP_002515113.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219997524|gb|ACL74126.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 605
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E E V +A LK GL+ V I+ N EW D + G +YT +
Sbjct: 45 ESTWSEVATEVGRWQQAMLKEGLKPGDRVAIMLRNCREWVVFDQACLGLGLITVPLYTDD 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI-----VQYEGKPDKPGVIS 315
PE + + +D + VVE Q +KIL+V+ + L+ I ++ + KPD P +
Sbjct: 105 RPENIAYIVREADVKLMVVEGRLQWKKILEVRDRLEGLRRIISVNTIEPDDKPDDPRL-- 162
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
D L + E LE +E T+VYTSGT G K VMLSH NI FNA +
Sbjct: 163 -DSLSDWLFGLKGELQAHALE---PDELATIVYTSGTTGKPKGVMLSHRNILFNAHASSR 218
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
L L +SFLPLSH +T Y M V A + +A
Sbjct: 219 CADLNEQDL-FLSFLPLSHTLERTAGYYMPMMVGAAVAYA 257
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+ SKV +G R R ++ G AP+ + R+F+ L +P+ +GM+E + +V+ PDD
Sbjct: 338 VASKVLARLG-GRLRYAVCGGAPLPPPIARFFIGLGLPVFHGYGMTESSPVVSVNRPDDN 396
Query: 176 KLDGVGRTIPGTQTKIVDPDE 196
+G+ +PG + KI D DE
Sbjct: 397 VPASIGKPLPGVEVKIGDKDE 417
>gi|440801180|gb|ELR22201.1| AMPbinding enzyme domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 542
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 28/199 (14%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E+ VR+ AK + LG E CI+ +N+
Sbjct: 41 EFAGLVRSAAKGLIALGFEPLAKTCIL--------------------------SNTRLEV 74
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDKPGVISWDELMELGR 324
+ + S++ + VED Q K+ K P LK ++ + G+ + P +SW + + G
Sbjct: 75 SYIVNHSESTVIFVEDRAQFAKVEAEKEHLPLLKHVIIFNGETAESPLAMSWGDFLGRGA 134
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
D+ +++ L + +C +++YTSGT G K VMLSH N+++ A+ Q F+ + A
Sbjct: 135 GVADDDVEKRLNALEPTQCASMIYTSGTTGPPKAVMLSHSNLSWTASTASQVFQAQ-AGD 193
Query: 385 SVISFLPLSHIAAQTVDIY 403
++FLPLSHIA Q I+
Sbjct: 194 CCVAFLPLSHIAEQMFTIH 212
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+A+GL R R ++ GAAPIS ++ R+F L + I EV+G SE +G + + P KL G
Sbjct: 279 EAVGLSRARWAVVGAAPISPDVLRFFAGLGLTIWEVYGQSEDSGPTSCNVPGKVKLGSAG 338
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANV-----RTVAKAFLKLGLERYHSVCIIGFNA 236
PG + I + +GE+ ++ + + +A LK G
Sbjct: 339 PPFPGVEVAIAE-----DGEVLVRGPNVFLGYYKDQAATEATLKDG-------------- 379
Query: 237 PEWFYS-DLGAIYAGGF 252
W YS DLG I GF
Sbjct: 380 --WLYSGDLGRIDEEGF 394
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+A I+ N ++ + +++F LP F++ GE+ PTMK+KR + Y + ID Y
Sbjct: 477 EAHIETVN-ADLAQVETVKRFSVLPHPFALERGEVTPTMKLKRNVIHSNYAAEIDAIY 533
>gi|448396768|ref|ZP_21569216.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
gi|445673297|gb|ELZ25858.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
Length = 682
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 15/229 (6%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E VR ++ F LG+ER + I EW +D + AG +YT +S
Sbjct: 64 ISYAEMRTIVRRLSAGFRTLGIERGDRIAIFSATRMEWAQTDFALLSAGAVVTTVYTGSS 123
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPK--LKAIVQYEGKPDKPGVISWDEL 319
PE + L DA+ VVE++ LE++L V+ L +I G D+ +++ E+
Sbjct: 124 PEQVRYLLDDPDADGVVVENEALLERVLAVEDDLDLEFLVSIDALGGYDDRDDILTLGEV 183
Query: 320 MELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF- 377
+ G AA D E+ + L + ++ +L+YTSGT G K V L+H N N + + F
Sbjct: 184 YDRGEAAFDREAYETRLAETSLDDLASLIYTSGTTGQPKGVQLTHGNFRANVNGVRKRFG 243
Query: 378 ----------KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L++ +++V S+LPL+H+ +T + + A + +A+
Sbjct: 244 PRPDRADDVPTLDAESVAV-SYLPLAHVFERTAGHFVMFATGACVAYAE 291
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V Q +DR N + + I++FE +P +F+ L PTMK KR ++ +++ I
Sbjct: 617 RVRAYVQREVDRIN-EDFQPHETIKRFELVPREFTEENDMLTPTMKKKRRVIMDRFEDRI 675
Query: 481 DKFY 484
D+ Y
Sbjct: 676 DRLY 679
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V+ A+G + + +SG +S EL R + ++ +PI E +G++E A + + PD
Sbjct: 366 LVFSSVRDALGGN-LELLISGGGSLSAELCRLYHAMGLPIYEGYGLTETAPVVSTNPPDA 424
Query: 175 FKLDGVG 181
K+ +G
Sbjct: 425 VKIGTIG 431
>gi|359726629|ref|ZP_09265325.1| long-chain-fatty-acid--CoA ligase [Leptospira weilii str.
2006001855]
Length = 681
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPMSASPGVLKMQDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RAGGSKKAEDRISAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|315633673|ref|ZP_07888963.1| long-chain-fatty-acid--CoA ligase [Aggregatibacter segnis ATCC
33393]
gi|315477715|gb|EFU68457.1| long-chain-fatty-acid--CoA ligase [Aggregatibacter segnis ATCC
33393]
Length = 595
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 4/223 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E++ + ++ A L ++ + I N P W +D+GA+ +Y TN+
Sbjct: 35 ISWSEFQQQIDQISLALLANHIDIQDKIGIFSHNMPRWTITDIGALQVRAVTVPIYATNT 94
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDE 318
+ + +D I V D +Q +++L++ +CPKL+ IV + + W +
Sbjct: 95 AKQAQFIINNADMKIIFVGDQEQYDQVLEIVDECPKLEKIVAMKSTIHLHEHAKACHWQD 154
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+E+ L + L+ + TL+YTSGT G K VML + N+ Q K
Sbjct: 155 FIEMADEQYQAELQQRLDGKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLNAHDQALK 214
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++ +S +SFLPLSHI + Y + A + D N ++
Sbjct: 215 VDDTDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L L+L K++ +G R R+ G A + + + +F S+ + I +GM+E T
Sbjct: 324 YALANKLVLGKLRALLG-GRIRMMPCGGAKLESTIGLFFHSIGLNIKLGYGMTETTA--T 380
Query: 169 VSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEY-----EANVRTVAKAFLK 220
VS DD F + +GR +PG + KI + +E G + +K Y E A FLK
Sbjct: 381 VSCWDDLHFNANSIGRLMPGAEAKIGENNEILVRGGMVMKGYYKKPQETADTFTADGFLK 440
Query: 221 LG 222
G
Sbjct: 441 TG 442
>gi|254494825|ref|ZP_01051728.2| long-chain fatty-acid-CoA ligase [Polaribacter sp. MED152]
gi|213690407|gb|EAQ41156.2| long-chain fatty-acid-CoA ligase [Polaribacter sp. MED152]
Length = 587
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTN 260
I K + V+ + L LG++ + +I N P W D+G + G +Y T
Sbjct: 36 ISTKTFIQKANNVSSSLLALGIKPNDKIAVITENNNPNWHILDIGILQIGAQNVPLYATL 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S + L SD+ C V ++ EK+ V + +LK + E G W +
Sbjct: 96 SENDYAYILNHSDSKYCFVSSNELYEKVKSVMDKT-QLKNVFSLEELATDYG---WSSFL 151
Query: 321 ELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
ELG+ +D++ +I ++ T++YTSGT G K VMLSH NI F I Q L
Sbjct: 152 ELGKNTDHHLKIDKLKASIKPDDLATIIYTSGTTGTPKGVMLSHKNIVFTVFAIEQRLNL 211
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +IS+LP+ HI ++ Y+ + ++ ++FA+
Sbjct: 212 QRGNNKIISYLPICHIFERSAFYYN-LYMSVQVYFAE 247
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ ++ R +I K K+A+G + + +SG+AP+ +L R F + IPI E +GM+E + A
Sbjct: 315 FKLKIARKIIFKKWKEALG-NNLQFMISGSAPLQPKLIRVFTAAGIPIFEGYGMTESSPA 373
Query: 167 HTVSAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
T++ + K+ VG+ + G + KI + +GEI +K
Sbjct: 374 GTLNDERNKGLKIGSVGKPLKGIEVKIAN-----DGEILMK 409
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV Q ID N +KI+KFE P +++I G L PT+K+KR + KY ++
Sbjct: 523 KVIARIQKEIDFYN-NRFGKWEKIKKFELTPDEWTIDDGLLTPTLKIKRNNIRDKYNNLY 581
Query: 481 DKFYD 485
K Y+
Sbjct: 582 QKIYN 586
>gi|448316041|ref|ZP_21505679.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
gi|445610387|gb|ELY64161.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
Length = 660
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 15/229 (6%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E A VR +A F +LG+E V I EW +D + AG +YT +S
Sbjct: 64 ISYTEMRALVRNLAAGFRELGIEPGDRVGIFAETRMEWAQTDFALLSAGAVVTTVYTGSS 123
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDE 318
P+ + L DA+ VVE++ LE++L+V+ + L+ IV + EG D+ V++ +
Sbjct: 124 PDQVRYLLDDPDADAVVVENEALLERVLEVEDEL-DLEFIVSMDRLEGYDDRDDVLTLAD 182
Query: 319 LMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ + G A D E+ + L+T ++ +L+YTSGT G K V L+H N N I + +
Sbjct: 183 VYDRGEDAFDLETYEEWLDTPEMDDLASLIYTSGTTGQPKGVELTHRNFRSNVNQIRKRY 242
Query: 378 ----------KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ + +S+LPL+H+ +T + + A + +A+
Sbjct: 243 GPRPDKDDELPVIDETVQSVSYLPLAHVFERTAGHFLLFASGACIAYAE 291
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L L+ S V++A+G + + +SG +S EL + ++ +PI E +G++E A +V+
Sbjct: 362 LADRLVFSSVREALGGE-IELLISGGGSLSKELCTLYHAMGLPIYEGYGLTETAPVVSVN 420
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEEGNGE 201
P++ ++ +G ++PG ++ DE GE
Sbjct: 421 PPEEPRIGTIGPSLPGVDVRV---DESVTGE 448
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
D + ++ Y A N +S + I++FE +P +F+ L PTMK KR ++++
Sbjct: 582 DDDRVREYVGETVAAVNENFES---HETIKRFELVPREFTEENDMLTPTMKKKRRVILER 638
Query: 476 YQSIIDKFY 484
++ ID+ Y
Sbjct: 639 FEDRIDRIY 647
>gi|298481594|ref|ZP_06999785.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|423214977|ref|ZP_17201505.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
gi|298272135|gb|EFI13705.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|392692240|gb|EIY85478.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
Length = 604
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K++ +VR A AF+ LG+E ++ I N PEWFY D GA Y T+S
Sbjct: 36 ISWKQFSGSVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRFLFVGEQYQYDAAFSIFGFCTSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M +G P +++++ E + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMAMGEGLPHNDTVEERTERASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ +S FLPL+H+
Sbjct: 209 FHTHDDRLTTMSDKDVSMNFLPLTHV 234
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETTGLKKALMLDAIRVGRIHNLDYLRLGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGIEVKIGEDNE 416
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A ID + ++ ++I++F LP FS+ GEL T+K+KR V K Y I
Sbjct: 537 KIVGLFRARIDTLQ-QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRSVVAKNYSEQI 595
Query: 481 DKFYD 485
+K Y+
Sbjct: 596 EKMYE 600
>gi|295086341|emb|CBK67864.1| Long-chain acyl-CoA synthetases (AMP-forming) [Bacteroides
xylanisolvens XB1A]
Length = 604
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K++ +VR A AF+ LG+E ++ I N PEWFY D GA Y T+S
Sbjct: 36 ISWKQFSGSVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRFLFVGEQYQYDAAFSIFGFCTSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M +G P +++++ E + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMAMGEGLPHNDTVEERTERASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ +S FLPL+H+
Sbjct: 209 FHTHDDRLTTMSDKDVSMNFLPLTHV 234
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A ID + ++ ++I++F LP FS+ GEL T+K+KR V K Y I
Sbjct: 537 KIVGLFRARIDTLQ-QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRSVVAKNYSEQI 595
Query: 481 DKFYD 485
+K Y+
Sbjct: 596 EKMYE 600
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q T G+K+ + A H + YL + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETAGLKKALMLDAIRVGRIHNLDYLRLGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGIEVKIGEDNE 416
>gi|398345147|ref|ZP_10529850.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 679
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 8/226 (3%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
L EY N+ A+A + LG++ V ++ N EW +D G I +G T +
Sbjct: 39 LYEYGLNL---AEALIDLGVKAREHVGLLADNRIEWIIADYGIILSGAADVPRGTDITDS 95
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
++ + S++ I +E+DK LEK + K+Q K+K I+ + + PGV+ +L+ G
Sbjct: 96 EIVYIVSHSESEIVFIENDKMLEKFNRNKSQLAKVKTIIIMDKDSNSPGVLKLYDLIAKG 155
Query: 324 ---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
RA ++ + I + TL+YTSGT G K V L H N+ + K+
Sbjct: 156 KQLRAGGSRKVEERVAGIKPEDLFTLIYTSGTTGLPKGVQLMHSNMMHQVLNVTPMLKIN 215
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKAT 426
+ A ++S LP+ H+ + V+ Y +++ AT ++ + L+ AT
Sbjct: 216 AEA-RLLSILPVWHVFERVVE-YVCISIGATTYYTNVRDLRQDLAT 259
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
++LSK++ A G R S+SG + + +F ++ I + E +GM+E + +V
Sbjct: 389 VVLSKIRTATG-GNLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQK 447
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE 197
+ VG +P T+ +I + + +
Sbjct: 448 LIIGSVGSIVPKTRLQIRNDNND 470
>gi|383780510|ref|YP_005465076.1| putative acyl-CoA synthetase [Actinoplanes missouriensis 431]
gi|381373742|dbj|BAL90560.1| putative acyl-CoA synthetase [Actinoplanes missouriensis 431]
Length = 566
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
V +A + +GL V I EW +D G + AGG +Y ++SPE LH L
Sbjct: 36 VTEIAAGLIAIGLRPQDRVAICSATRVEWIEADFGVMCAGGATTTVYPSSSPEEVLHILT 95
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR----AA 326
S + VVE+ L KIL P ++ + +G ++ +SWD+L ELGR A
Sbjct: 96 DSGSRFAVVENAGHLSKILA----SPLIEKAILIDGSDER--ALSWDDLRELGRTTLAAN 149
Query: 327 PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSV 386
PD D V+ I ++ TL+YTSGT G K V + HD + I + L
Sbjct: 150 PDAVTD-VVAGIGPDDLATLIYTSGTTGLPKGVRVGHDAWIYQGLAIQAMGIVHPDDLGY 208
Query: 387 ISFLPLSH 394
+ +LPLSH
Sbjct: 209 L-WLPLSH 215
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 99 LEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVF 158
L + V P RLV L++V+ G R R +SGA+ +S E+ +F ++ +PI E +
Sbjct: 290 LRRGVLRPIADRLV----LARVRDRFG-GRMRFFISGASALSPEIAEWFDAIRLPIAEGY 344
Query: 159 GMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
G++E + P D + VG +PGT+ ++ D +GEI LK
Sbjct: 345 GLTESCATTIFNRPFDAEYGTVGVPLPGTRVRLGD-----DGEILLK 386
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 430 IDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+D N K++++ + I+KF L + + G+L P++K++R V ++YQS +D Y
Sbjct: 512 LDELN-KTLNSWETIKKFVILEENLDVEGGDLTPSLKLRRRVVEQRYQSQLDDLY 565
>gi|417777979|ref|ZP_12425791.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410781949|gb|EKR66516.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 682
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 41 YEQGIQ-LAEALIELGVQQRQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 99
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 100 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDPMSASPGVLKMQDLIEKGKKL 159
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
RA + + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 160 RAGGSKKAEDRISAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 219
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 220 -RLLSILPIWHVFERVVEYVCIGLGAATYY 248
>gi|320107256|ref|YP_004182846.1| AMP-dependent synthetase and ligase [Terriglobus saanensis SP1PR4]
gi|319925777|gb|ADV82852.1| AMP-dependent synthetase and ligase [Terriglobus saanensis SP1PR4]
Length = 581
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 5/200 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E +VR +A G+ + V +I N EW +D + G ++ T +
Sbjct: 34 ITSSELMGHVRGLAAWLRAQGVAKGDRVALIAENRWEWAVTDFATMAVGAVGVPLFPTLT 93
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
+ L S A ICVV + +K+L + + +K +V E K GV+ +
Sbjct: 94 ADQTAAQLRDSGAKICVVSTAELAKKVLGSR-EATGVKTVVVMEVKEPLAGVVM---FAD 149
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
AP+ D +L+++ ++ T++YTSGT G +K VML+H NI N F S
Sbjct: 150 AASTAPNADFDTLLKSVGPDDLATIIYTSGTTGDAKGVMLTHGNIASNLTMTTGLFNF-S 208
Query: 382 AALSVISFLPLSHIAAQTVD 401
A S +SFLPLSH+ A+ +D
Sbjct: 209 ANDSCVSFLPLSHVTARHID 228
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
VK+ I +A + L +++L L+ SKVK A G R +SG AP
Sbjct: 282 VKKKILGWAIGVGRKSQKTLLAGKTPGSLSWKLANKLVYSKVKAAFG-GRVGTFVSGGAP 340
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-E 197
+ +L +F IPI E +G++E + +V+ P K+ G T+ + +I + E E
Sbjct: 341 LGIDLANWFADAGIPILEGYGLTETSPVISVNLPGRHKIGTTGPTMKNIECRIAEDGELE 400
Query: 198 GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPE-WFYS-DLGAIYAGGF 252
G K Y A A PE WF++ D+G I A GF
Sbjct: 401 VRGPSIFKGYWQKPEATADAI-----------------DPEGWFHTGDVGNIDAEGF 440
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 416 DKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKK 475
D L +Y QA I+R N +++ +KI+KF LP ++ I TGE+ P+MK+KR V +K
Sbjct: 513 DATVLALY---QAEIERVN-ATLAPFEKIKKFRLLPVEWGIDTGEVTPSMKLKRRIVAQK 568
Query: 476 YQSIIDKFY 484
+ S I Y
Sbjct: 569 HASDIASMY 577
>gi|253700714|ref|YP_003021903.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
gi|251775564|gb|ACT18145.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
Length = 603
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 5/208 (2%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
V++ KLG++ + I+ N W +D+G + AGG +Y T +PE + L +
Sbjct: 49 VSRGLRKLGMKPGDRIAILSENRAGWIIADMGILCAGGVTVPVYATGTPEQIAYALSSCG 108
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG--VISWDELMELGRAAPDE-- 329
A I V Q K+L+V+ P L+ +V +E + V ++ +L E+ D
Sbjct: 109 ARIVFVSSKVQYRKLLQVRDALPDLELVVSFERFLGEAALQVTTFYQLSEVDDPILDAER 168
Query: 330 -SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVIS 388
++ V++++ T++YTSGT G K +L+H N+ F+ + +S
Sbjct: 169 GEIESVIDSLTPEMPATIIYTSGTTGTPKGAVLTHGNLVFDVRATLDKVGGVGQGDLFLS 228
Query: 389 FLPLSHIAAQTVDIYSVMTVAATLWFAD 416
FLPLSH+ ++ Y ++ A + FAD
Sbjct: 229 FLPLSHVFERSAGYYLPLSCGAAIAFAD 256
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 420 LKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
+++YK+ A++ K ++ Q I+KF LP DF++ +GEL PT+KVKR + ++Y+
Sbjct: 538 IELYKSRVEAVN----KELAPYQTIKKFALLPRDFTMDSGELTPTLKVKRQVISERYRDR 593
Query: 480 IDKFYD 485
ID Y+
Sbjct: 594 IDHLYN 599
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ G DR + SG AP+ E+ +F S+ +P+ E +G++E + ++ D
Sbjct: 336 LVFSKLRSRFG-DRLKFCASGGAPLDREINEFFWSIGVPVFEGYGLTETSPVLCSNSFDA 394
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VG + T+ I G+GE+ +
Sbjct: 395 LRFGSVGTPLASTEIAIA-----GDGEVLAR 420
>gi|432343786|ref|ZP_19592928.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
gi|430771196|gb|ELB87082.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
Length = 603
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V VAK + LG+++ V ++ EW D AGG +Y T+
Sbjct: 45 DVTAAEFAAQVTAVAKGLIALGVQQGDRVALMSATRYEWPLVDFAIWAAGGVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE+ + V A+ L+ + Q E GV+ +EL
Sbjct: 105 SAEQVRWILEDSAAIDLVVENATHAATVKAVAAEATALRGVYQIEVSDGGRGVV--EELT 162
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---F 377
ELG PD + + + +++ TL+YTSGT G K L+H N+ + I+
Sbjct: 163 ELGADVPDSEVQARVAALKSSDPATLIYTSGTTGRPKGCQLTHSNLIAESKGILDSSLGT 222
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYS 404
L++ +S + FLP++H+ A+ V I S
Sbjct: 223 LLKTPGVSTLMFLPMAHVLARAVSIAS 249
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G +C++++SG AP+ L +F + I I E +G++E + A
Sbjct: 331 HALFDKLVFSKLRAALG-GKCQLAISGGAPLGARLGHFFRGIGITIYEGYGLTETSAAFA 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYH 227
V+ + K+ VG+ + G +I D E +G + Y N A A
Sbjct: 390 VNTIGEQKVGSVGKPLAGNSVRIADDGEILLSGPVVFSGYWRNENATADAIEN------- 442
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGF 252
WF++ DLG++ A G+
Sbjct: 443 ----------GWFHTGDLGSVDADGY 458
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN K +S+A+ I+KF LP DF+ TGEL PTMK+KR V + I Y
Sbjct: 547 AVAEAN-KLVSHAEAIKKFRVLPVDFTEETGELTPTMKLKRNVVHDSFADDIAAIY 601
>gi|418721482|ref|ZP_13280659.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418736583|ref|ZP_13292982.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410742174|gb|EKQ90924.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410747469|gb|EKR00374.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 681
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDSTSTSPGVLKMQDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
R + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RTGGSRKAEERVSAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|385682208|ref|ZP_10056136.1| long-chain acyl-CoA synthetase [Amycolatopsis sp. ATCC 39116]
Length = 598
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E+ A V VAK ++ G+ER V ++ EW D AG +Y T+
Sbjct: 45 DVTAREFAAQVIGVAKGLVEAGIERGDRVGLMSKTRYEWTLIDFAIWAAGAVTVPIYDTS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A VE + L + +V+ + P L+ Q E +P V DEL
Sbjct: 105 SPEQVAWILSDSGAKGVFVETSEHLAAVDEVRDRLPGLQYTWQIEAA--RPAV---DELT 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
LG D+++ + + T+VYTSGT G K V L+H N+ I F +L
Sbjct: 160 TLGADVADDTVHERRRIVQAGDLATIVYTSGTTGRPKGVELTHRNLLAEIRADINAFPQL 219
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSV 405
S++ FLPL+H+ A+ + + +V
Sbjct: 220 MEQGNSLLCFLPLAHVLARAIAVTAV 245
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+ D
Sbjct: 332 LVYGKLRAALG-GRCIAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTETSAAANVNTQDA 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
F++ VGR + GT +I + +GE+ LK
Sbjct: 391 FRVGTVGRPVAGTSVRIAE-----DGEVLLK 416
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A Q A+D AN K +S A+ I+KF L DF+ GE+ P++K+KR V K Y + I+ Y
Sbjct: 538 AVQGAVDEAN-KQVSQAESIKKFVILGNDFTEAGGEITPSLKLKRNVVTKNYATFIEGLY 596
>gi|384102186|ref|ZP_10003204.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383840376|gb|EID79692.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 603
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V VAK + LG+++ V ++ EW D AGG +Y T+
Sbjct: 45 DVTAAEFAAQVTAVAKGLIALGVQQGDRVALMSATRYEWPLVDFAIWAAGGVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE+ + V A+ L+ + Q E GV+ +EL
Sbjct: 105 SAEQVRWILEDSAAIDLVVENATHAATVKAVAAEATALRGVYQIEVSDGGRGVV--EELT 162
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---F 377
ELG PD + + + +++ TL+YTSGT G K L+H N+ + I+
Sbjct: 163 ELGADVPDSEVQARVAALKSSDPATLIYTSGTTGRPKGCQLTHSNLIAESKGILDSSLGT 222
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYS 404
L++ +S + FLP++H+ A+ V I S
Sbjct: 223 LLKTPGVSTLMFLPMAHVLARAVSIAS 249
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L ++ SK++ A+G +C++++SG AP+ L +F + I I E +G++E + A
Sbjct: 331 HALFDKVVFSKLRAALG-GKCQLAISGGAPLGARLGHFFRGIGITIYEGYGLTETSAAFA 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYH 227
V+ + K+ VG+ + G +I D E +G + Y N A A
Sbjct: 390 VNTIGEQKVGSVGKPLAGNSVRIADDGEILLSGPVVFSGYWRNENATADAIEN------- 442
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGF 252
WF++ DLG++ A G+
Sbjct: 443 ----------GWFHTGDLGSVDADGY 458
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN K +S+A+ I+KF LP DF+ TGEL PTMK+KR V + I Y
Sbjct: 547 AVAEAN-KLVSHAEAIKKFRVLPVDFTEETGELTPTMKLKRNVVHDSFADDIAAIY 601
>gi|226362977|ref|YP_002780759.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226241466|dbj|BAH51814.1| putative long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 616
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 185 PGTQT-KIVDPDEEGN-GEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
PG + + VDP + E VR +A + LG++ V + EW +
Sbjct: 35 PGREAFRFVDPQNPKQWSSVTWSEAGDRVRNLAAGLIVLGVQAEQRVALASATRYEWVLA 94
Query: 243 DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV 302
DL + AG +Y T++ + + S + + EDD QL K+ + + + ++ +V
Sbjct: 95 DLAVMCAGAATTTVYPTSTASDVAYIVANSGSRVVFAEDDAQLAKLRENRGELGDVEKVV 154
Query: 303 QYEGKP-DKPGVISWDELMELGR----AAPDESLDRVLETIATNECCTLVYTSGTEGASK 357
+G D VI++ +L +LG +PD DR+ E IA ++ TL+YTSGT G K
Sbjct: 155 LIDGAAGDDDWVITFQQLHDLGEELLAESPDAVHDRI-EAIAPDDLATLIYTSGTTGRPK 213
Query: 358 PVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHI 395
V LSH T+ AA I L++ L + +LPLSH+
Sbjct: 214 GVRLSHSAWTYEAAAIDATGILDADDLQYL-WLPLSHV 250
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 12/114 (10%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S +++ G R + +SG+A ++ ++ ++F ++ I + E +G+SE + A V+ P
Sbjct: 350 LVYSTIRERFG-GRLKFFISGSAALNRDVAQWFDAVGIVVLEGYGLSETSAASFVNRPSA 408
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK------EYEANVRTVAKAFLKLG 222
++ VG IPGT+T+I D +GEI +K Y N A+AF G
Sbjct: 409 YQFGTVGWPIPGTETRIAD-----DGEILIKGPGVMSGYHENPEATAEAFTDDG 457
>gi|421096224|ref|ZP_15556931.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410361125|gb|EKP12171.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
Length = 681
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDSTSTSPGVLKMQDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
R + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RTGGSRKAEERVSAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|398347129|ref|ZP_10531832.1| long-chain-fatty-acid CoA ligase [Leptospira broomii str. 5399]
Length = 679
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 8/226 (3%)
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
L EY N+ A+A + LG++ V ++ N EW +D G I G T +
Sbjct: 39 LYEYGLNL---AEALIDLGVKAREHVGLLADNRIEWIIADYGIILTGAADVPRGTDITDS 95
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
++ + S++ + +E+DK LEK + K+Q K+K I+ + + PGV+ +L+E G
Sbjct: 96 EIVYIVSHSESEVVFIENDKMLEKFNRNKSQLAKVKTIIIMDKDSNSPGVLKLYDLIEKG 155
Query: 324 ---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
RA ++ + I + TL+YTSGT G K V L H N+ + K+
Sbjct: 156 KQLRAGGSRKVEERVAGIKPEDLFTLIYTSGTTGLPKGVQLMHSNMMHQVLNVTPMLKIN 215
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKAT 426
+ A ++S LP+ H+ + V+ Y +++ A ++ + L+ AT
Sbjct: 216 AEA-KLLSILPVWHVFERVVE-YVCISIGAATYYTNVRDLRQDLAT 259
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
++LSK++ A G R S+SG + + +F ++ I + E +GM+E + +V
Sbjct: 389 VVLSKIRTATG-GNLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQK 447
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE 197
+ VG +P T+ +I + + +
Sbjct: 448 LIIGSVGSIVPKTRLQIRNDNND 470
>gi|448612502|ref|ZP_21662524.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
gi|445741350|gb|ELZ92852.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
Length = 667
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
Query: 200 GEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTT 259
G++ ++ VR +A F LG+E V I+ EW +D + AGG +YT+
Sbjct: 63 GDVTYEKMRDIVRNLAAGFRDLGVEAGDRVGILSHTRMEWAQTDFAVLGAGGAVTTVYTS 122
Query: 260 NSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISW 316
+S + L AN VVE+ + LE++L V+ L IV +YEG D+ +++
Sbjct: 123 SSERQVRYLLSDPGANAVVVENQELLERVLAVEDDL-DLSFIVVIDEYEGDEDRDDILTL 181
Query: 317 DELMELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
E+ G DES + L++ ++ +L+YTSGT G K V L+H N N +
Sbjct: 182 GEVYRRGEECFDESEYESWLDSRDPDDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYR 241
Query: 376 YF-----KLESAALS----VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
F K + A++ +SFLPL+H+ + + + AT+ +A+
Sbjct: 242 RFGPRPDKGDVPAINPDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAE 291
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ ++V++A+G D +SG +S EL + ++ +PI E +G++E + T
Sbjct: 360 HRLADRLVFNQVREALG-DNLEFFISGGGSLSAELCALYHAMGLPIFEGYGLTETSPVIT 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P+ K+ +G + + K+
Sbjct: 419 VNPPEAPKIGTIGYPLRNVEVKL 441
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ +A ++ AN ++ + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEAEVEAAN-ENFESYERIKQFRIVPEEFSENNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
+ YD
Sbjct: 645 NLIYD 649
>gi|225011695|ref|ZP_03702133.1| AMP-dependent synthetase and ligase [Flavobacteria bacterium
MS024-2A]
gi|225004198|gb|EEG42170.1| AMP-dependent synthetase and ligase [Flavobacteria bacterium
MS024-2A]
Length = 588
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 217 AFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDAN 275
A L LG+E + +I N EW D+G + G +Y T S E + L S++
Sbjct: 49 ALLALGVESQDKIAMISSTNRTEWNLVDIGLLAIGAVNVPIYPTISSEDYEYILNHSESQ 108
Query: 276 ICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAA-PDESLDRV 334
C V D + +K++ +K + LK I ++ G +W EL+++ ++ D L +
Sbjct: 109 YCFVSDQEVYDKVVAIKDKVKSLKKIYSFDSIK---GCSNWKELLKMETSSDQDGELKKR 165
Query: 335 LETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+ ++ T++YTSGT G K VMLSHDN+ N + L S +SFLP+ H
Sbjct: 166 KSAVLPSDLATIIYTSGTTGTPKGVMLSHDNVVSNVLASSKRLPLNIGEASALSFLPVCH 225
Query: 395 IAAQTVDIYSVMTVAATLWFAD 416
I + + +Y M + +++FA+
Sbjct: 226 IFERVI-LYIYMYNSVSVYFAE 246
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 424 KATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKF 483
+A Q ID N K + ++I++FE +P +++I G L PTMK+KR V +KY +I+K
Sbjct: 528 EAIQNDIDIHN-KKFGSWEQIKRFELIPEEWTIDEGHLTPTMKLKRKVVKEKYSDLIEKM 586
Query: 484 YD 485
Y+
Sbjct: 587 YE 588
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ TG+K+ + +A + L+ Y Y + + ++ R LILSK ++A+G + S
Sbjct: 283 ELTGIKQKLFYWAVNVGLE-YEPYGQNGAWYEFKLKIARKLILSKWQEALG-GNLELIAS 340
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+A + L R F + + + E +G++E + +V+ + FK+ VG+ I G KI
Sbjct: 341 GSAALQPRLARIFTAAGMTLVEGYGLTETSPVISVNDMRNNYFKVGSVGQIIDGVTVKIA 400
Query: 193 DPDEEGNGEICLK 205
+ +GEI K
Sbjct: 401 E-----DGEILCK 408
>gi|345867216|ref|ZP_08819233.1| AMP-binding enzyme family protein [Bizionia argentinensis JUB59]
gi|344048430|gb|EGV44037.1| AMP-binding enzyme family protein [Bizionia argentinensis JUB59]
Length = 589
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 7/217 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTN 260
I +EY +++ L+LG++ + +I N EW D+G + G +Y T
Sbjct: 35 ISTQEYVDQANAISRGLLRLGIQPNDKIAVISTTNRTEWNIMDIGILQIGAQNVPIYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E + L S A C V D LEK+ +K Q KLK I ++ D G SW +++
Sbjct: 95 SKEDYEYILNHSGATYCFVSDTGILEKLNPIKDQT-KLKEIYTFD---DIDGENSWKDIL 150
Query: 321 ELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+LG+ ++ +D + T++ TL+YTSGT G K VMLSH NI N +
Sbjct: 151 KLGKDTSNQQEVDARKADVKTDDLATLIYTSGTTGRPKGVMLSHKNIVSNVLDSGRRVPF 210
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ H+ + + +Y +++A+
Sbjct: 211 DYGKSKGLSFLPVCHVFERMI-LYLYQYCGVEIYYAE 246
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 110 RLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV 169
+L R LI SK K+ +G + + +SG+A + L R F + ++PI E +G++E + V
Sbjct: 317 KLARKLIFSKWKEGLG-GQLDLMVSGSAALQPRLTRVFAAAEMPIMEGYGLTETSPVIAV 375
Query: 170 SAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ + F++ VGR I KI +GEI +K
Sbjct: 376 NDQREGGFRVGTVGRVIDNVDVKIAK-----DGEILIK 408
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q ID N K + ++I+KFE P ++I G L PTMK+KR + + Y+ +I+K Y
Sbjct: 531 QEEIDEVN-KKFGHWEQIKKFEITPDPWTIEGGHLTPTMKMKRKVIKEIYKDLIEKIY 587
>gi|111022997|ref|YP_705969.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110822527|gb|ABG97811.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
Length = 595
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 160 MSECAGAHTVSAPDDFKL-DGVGRTIPGTQTKIVDPDEEGNG---EICLKEYEANVRTVA 215
M E + + S P+D + D V R K V GNG ++ E+ V VA
Sbjct: 1 MREFSVPQSFSIPEDASMADTVFRHAE-EDPKFVPFKRPGNGGWVDVTAAEFAEQVSAVA 59
Query: 216 KAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDAN 275
K + G+E V I+ EW D AGG +Y T++P+ L S +
Sbjct: 60 KGLIASGVELGDRVAILSATRYEWVVIDYAIWTAGGCTVAIYETSAPDQAKWILEDSGTS 119
Query: 276 ICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVL 335
+ VVE+ KQ + + V P LK ++Q EG G I DEL + G DE L
Sbjct: 120 LLVVENAKQADALKVVTDAAPDLKEVLQIEG-----GAI--DELSKRGEGVTDEQLHERR 172
Query: 336 ETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI-IQYFKLESAALSVISFLPLSH 394
+ + TL+YTSGT G K V L+H N +A + + A + FLPL+H
Sbjct: 173 HQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAESAAVKLALSDAMYAGRRTLMFLPLAH 232
Query: 395 IAAQTV 400
+ A+ +
Sbjct: 233 VFARAI 238
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G C ++SG A + L +F + +P+ E +G++E + A +
Sbjct: 324 HALFDKLVYSKLRTALG-GECDRAVSGGAALGARLGHFFRGIGVPVYEGYGLTETSAAIS 382
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V+ K+ VG+ I G KI + +GE+ LK
Sbjct: 383 VNTTRAQKVGTVGKPIDGHAAKIGE-----DGELLLK 414
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +SN ++I+K+ L DF+ TGEL PT+K+KR + K++ + I+ Y
Sbjct: 546 KKVSNPERIKKYRILEVDFTQETGELTPTLKLKRNVIHKEHGAAIEAIY 594
>gi|421596412|ref|ZP_16040239.1| putative fatty-acid--CoA ligase [Bradyrhizobium sp. CCGE-LA001]
gi|404271479|gb|EJZ35332.1| putative fatty-acid--CoA ligase [Bradyrhizobium sp. CCGE-LA001]
Length = 607
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E+ + VA A +G II PEW ++D+G + AGG A+G+Y T++
Sbjct: 39 REWLEISKEVAYALRAIGFMPGDVASIIANAVPEWVHADMGILCAGGVASGIYPTDASSQ 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDEL 319
+ + S + VED++QL+K+L +A+CP L+ I+ ++ G D V+S DE
Sbjct: 99 VEYLVNDSATKVIFVEDEEQLDKVLACRARCPTLQKIIVFDMEGLSGFSDDM-VLSLDEF 157
Query: 320 MELGR--AAPDESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
LGR E+L ++++ + + LVYTSGT G K M ++ ++T +
Sbjct: 158 RALGRNHMVGREALWQEMIDSRSAGDLAILVYTSGTTGPPKGAMHANRSVTHQMRHANDF 217
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +I FLPL H+A + Y + + + + FA+
Sbjct: 218 IPAQEDEERLI-FLPLCHVAERIGGYYISVALGSVMNFAE 256
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 110 RLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV 169
RL + +++ +GLDRCR++ +GAAPI+ EL R++L+L I I EV+G +E G T+
Sbjct: 331 RLAYQVAFRNIRRMIGLDRCRIAFTGAAPIAPELIRWYLALGIDIHEVYGQTENCGVATM 390
Query: 170 SAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ KL VG +P + ++ P+ GEI +K
Sbjct: 391 MPAERTKLGSVGTAVPWGEV-MLSPE----GEILIK 421
>gi|374852591|dbj|BAL55521.1| long-chain acyl-CoA synthetase [uncultured Acidobacteria bacterium]
Length = 555
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
+RT+A F G+ V ++ N PEW SDL + G ++ T +P H L
Sbjct: 1 MRTLAFGFYANGVRPGDHVALLSENRPEWTLSDLALLALGAVDVPIHATQAPPQVAHILR 60
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG-VISWDELMELGR--AAP 327
S A I V+ +Q +++ V A ++ I+ +E D ++ + +L E G+ AA
Sbjct: 61 DSGARILVLSTGEQWQRLRDVLAGVESVEKIITFEAIADGDARLLPFSQLFEAGQRWAAH 120
Query: 328 DESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSV 386
+ L DR+ + ++ TL+YTSGT G K VML+H NIT N ++ S + V
Sbjct: 121 EPDLYDRLRRAVRPSDLATLLYTSGTTGEPKGVMLTHGNITSNVTAAMRVLGYSSRDV-V 179
Query: 387 ISFLPLSH 394
+S LPLSH
Sbjct: 180 LSILPLSH 187
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L+++++ +GLDR R +SG A +S ++ +FL L + I + +G++E + TV+ P
Sbjct: 289 VLARIREHIGLDRARSLISGGAALSPDVAYFFLGLGLEILQGYGLTETSPVVTVNPPGAN 348
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK------EYEANVRTVAKAFLKLGLERYHSV 229
K+ VGR IPG + KI + +GEI ++ Y A AF + G R V
Sbjct: 349 KIGTVGRPIPGVEVKIAE-----DGEILVRGPNVMLGYYNRPEETAAAFTEDGWLRTGDV 403
Query: 230 CII---GFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD--ANICVVEDDKQ 284
+ G+ DL G + A P+A + LV S A VV D ++
Sbjct: 404 GFLDADGYLVITDRKKDLMKTSGGKYVA-------PQALENRLVASPLIAQAVVVGDGRK 456
Query: 285 LEKILKVKAQCPKLKAIVQY 304
L V P +A+ +Y
Sbjct: 457 FPAALIV----PNFEALRRY 472
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ + + ++R + S +++++ L + +I GEL PT+KV+R V +KY+ II
Sbjct: 491 KIRRLYEEEVERL-MADFSPHERVKRIALLERELTIAEGELTPTLKVRRRIVEEKYRDII 549
Query: 481 DKFY 484
++ Y
Sbjct: 550 ERLY 553
>gi|373456317|ref|ZP_09548084.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371717981|gb|EHO39752.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 592
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E VR +A + GL+ + I+ N PEW +D G +Y T P+
Sbjct: 36 REVGEKVRLLAHGLMARGLQPGDRIAILSENLPEWPVTDFAVFGLRGVVVPIYPTLMPQQ 95
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG- 323
+ L + V++ Q +KI +K + P L+ I YE GV ++D+L++ G
Sbjct: 96 IAYILNDAKVKAIFVQNALQYDKITAIKKEVPSLEMIFTYE---PLTGVATFDKLLQEGA 152
Query: 324 ---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
++ P+ + + +ETI E C+LVYTSGT G K VML H F+ +L
Sbjct: 153 VHAQSFPN-AFEESMETIDPEELCSLVYTSGTTGEPKGVMLCHRGFVFDIVQSEARLRLR 211
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+ + +SFLPLSH+ + + + AT+ +A
Sbjct: 212 ADDV-FLSFLPLSHLYERLAGHWCPIYRGATIHYA 245
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSE--PYTYRLVRWLILSKVKQAMGLDRCRVS 132
Q++ + R I ++ T L+++ V++ YRL L+ +KVK +G R R
Sbjct: 283 QSSALARNIFYWSIGTGLEYHEKRRAGKVNKWLERRYRLAEKLVFNKVKAKLG-GRFRHP 341
Query: 133 LSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIV 192
++G AP+S E + F ++ +PI E +GM+E ++ P + + G+ I G + KI
Sbjct: 342 IAGGAPLSVETLKIFEAIGLPIIEGYGMTETHLIIALTPPGEVRYGSCGKPIDGIKVKIA 401
Query: 193 DPDE 196
D E
Sbjct: 402 DDGE 405
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K + I+R + + +K++KF L FS EL P++K+KR V + Y+ II
Sbjct: 527 QVLKLYEEEIERLQ-EGFARFEKVKKFALLAEPFSQERNELTPSLKIKRRVVEQNYKDII 585
Query: 481 DKFYD 485
+ FY+
Sbjct: 586 ESFYE 590
>gi|397736417|ref|ZP_10503099.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396927607|gb|EJI94834.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 595
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 160 MSECAGAHTVSAPDDFKL-DGVGRTIPGTQTKIVDPDEEGNG---EICLKEYEANVRTVA 215
M E + + S P+D + D V R K V GNG ++ E+ V VA
Sbjct: 1 MREFSVPQSFSIPEDASMADTVFRHAE-EDPKFVPFKRPGNGGWVDVTAAEFAEQVSAVA 59
Query: 216 KAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDAN 275
K + G+E V I+ EW D AGG +Y T++P+ L S +
Sbjct: 60 KGLIASGVELGDRVAILSATRYEWVVIDYAIWTAGGCTVAIYETSAPDQAKWILEDSGTS 119
Query: 276 ICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVL 335
+ VVE+ KQ + + V P LK ++Q EG G I DEL + G DE L
Sbjct: 120 LLVVENAKQADALKVVTDAAPDLKEVLQIEG-----GAI--DELSKRGEGVTDEQLHERR 172
Query: 336 ETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI-IQYFKLESAALSVISFLPLSH 394
+ + TL+YTSGT G K V L+H N +A + + A + FLPL+H
Sbjct: 173 HQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAESAAVKLALSDAMYAGRRTLMFLPLAH 232
Query: 395 IAAQTV 400
+ A+ +
Sbjct: 233 VFARAI 238
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G C ++SG A + L +F + +P+ E +G++E + A +
Sbjct: 324 HALFDKLVYSKLRTALG-GECDRAVSGGAALGARLGHFFRGIGVPVYEGYGLTETSAAIS 382
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V+ K+ VG+ I G KI + +GE+ LK
Sbjct: 383 VNTTRAQKVGTVGKPIDGHAAKIGE-----DGELLLK 414
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +SN ++I+K+ L DF+ TGEL PT+K+KR + K++ + I+ Y
Sbjct: 546 KKVSNPERIKKYRILEVDFTQETGELTPTLKLKRNVIHKEHGAAIEAIY 594
>gi|225351951|ref|ZP_03742974.1| hypothetical protein BIFPSEUDO_03556 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157198|gb|EEG70537.1| hypothetical protein BIFPSEUDO_03556 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 678
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 199 NGEICLK---EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NGE K E A++R +AK + GL++ V + + EW D + GG A
Sbjct: 115 NGEWVTKTGNEVLADIRQIAKGLMHYGLKKGDGVAFMCRTSYEWDVFDAAVMACGGVLAT 174
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS 315
+Y T+S E + + SD+ + VVE K +CP L+ I+ +E
Sbjct: 175 IYDTDSAEQIRNIVNNSDSRLLVVETTDMRAKADGADKECPALEHIICFENG-------G 227
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
DE+M G DE LD + +I + C++VYTSG+ A K V ++H++ A +
Sbjct: 228 LDEIMAYGSGVSDEELDERIASIKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPA 287
Query: 376 YFK--LESAALSVISFLPLSHIAAQTVDIYSVMT 407
Y L SV+ FLP +H A+ ++ V +
Sbjct: 288 YMPKLLHERKNSVLLFLPQAHSFARAINYICVAS 321
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K+Y
Sbjct: 608 NNAAVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIKRYA 666
Query: 478 SIID 481
++++
Sbjct: 667 TLLN 670
>gi|383110916|ref|ZP_09931734.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
gi|313694486|gb|EFS31321.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
Length = 604
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K++ VR A AF+ LG+E ++ I N PEWFY D GA Y T+S
Sbjct: 36 ISWKQFSGTVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRFLFVGEQYQYDAAFSIFGFCSSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M G+ P +++++ E + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMATGKGLPHNDTVEERTERASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ +S FLPL+H+
Sbjct: 209 FHTHDDRLTTMSDKDVSMNFLPLTHV 234
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETTGLKKALMLDAIRVGRIHNLDYLRLGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGLEVKIGEDNE 416
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A ID + ++ ++I++F LP FS+ GEL T+K+KR V K Y I
Sbjct: 537 KIVGLFRARIDTLQ-QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRAVVAKNYSEQI 595
Query: 481 DKFYD 485
+K Y+
Sbjct: 596 EKMYE 600
>gi|225181270|ref|ZP_03734715.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
gi|225168050|gb|EEG76856.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
Length = 642
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 17/227 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E A V+ ++ + LG++ V ++ W SDL + A +Y TN +
Sbjct: 45 EVAAEVKDLSLGLVSLGVQPKDRVALMMTTQGNWLISDLAILSAAAINVPVYPTNRGQQI 104
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-------------DKPG 312
H L S+A + +V L +I +V PKLK I+ G D+
Sbjct: 105 AHILNDSEAGVIIVGSVDLLREIWQVWDTIPKLKTIIIPTGSKSEHALSDITGNLGDERQ 164
Query: 313 VISWDELMELGRAAPDESLDRVLE---TIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
V+ + E+ E+GR E+ D E ++ ++ +++YTSGT G K VML+HDN N
Sbjct: 165 VLEFAEVQEMGREFARENPDVYQERWQSVEKDDLASVLYTSGTTGNPKGVMLTHDNFLSN 224
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++ ++ ++ +SFLPLSH+ +T Y M V T+ +A+
Sbjct: 225 VRNALERVEVHDWFVT-LSFLPLSHVLERTAGYYMPMLVGCTIAYAE 270
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEP-----YTYRLVRWLILSKVKQAMGLDRCRVSL 133
+K+ I +AK + Q+ ++E EP + + L L+ S +++ +G R +
Sbjct: 311 IKKRIFFWAKGVARQNAQLFVEG--KEPSGFFGFKFSLADKLVFSTIRERIG-GRLEYCI 367
Query: 134 SGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVD 193
SG AP+ EL +F ++I I E +G++E + T + + + VG+ I + +I
Sbjct: 368 SGGAPLGRELAEFFNGMNIRILEGYGLTETSPIITFNCLKNMRYGSVGQVIAQGEVRI-- 425
Query: 194 PDEEG 198
DE+G
Sbjct: 426 -DEDG 429
>gi|262405353|ref|ZP_06081903.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|293370545|ref|ZP_06617097.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|294644597|ref|ZP_06722350.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294810339|ref|ZP_06769000.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|336404562|ref|ZP_08585255.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
gi|345507938|ref|ZP_08787579.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|229442559|gb|EEO48350.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|262356228|gb|EEZ05318.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292634279|gb|EFF52816.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|292640034|gb|EFF58299.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294442447|gb|EFG11253.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|335941466|gb|EGN03319.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
Length = 604
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K++ VR A AF+ LG+E ++ I N PEWFY D GA Y T+S
Sbjct: 36 ISWKQFSRTVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRFLFVGEQYQYDAAFSIFGFCTSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M +G P +++++ E + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMAMGEGLPHNDTVEERTERASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ +S FLPL+H+
Sbjct: 209 FHTHDDRLTTMSDKDVSMNFLPLTHV 234
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETTGLKKALMLDAIRVGRIHNLDYLRLGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGIEVKIGEDNE 416
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A ID + ++ ++I++F LP FS+ GEL T+K+KR V K Y I
Sbjct: 537 KIVGLFRARIDTLQ-QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRSVVAKNYSEQI 595
Query: 481 DKFYD 485
+K Y+
Sbjct: 596 EKMYE 600
>gi|328544135|ref|YP_004304244.1| AMP-dependent synthetase/ligase [Polymorphum gilvum SL003B-26A1]
gi|326413878|gb|ADZ70941.1| AMP-dependent synthetase and ligase [Polymorphum gilvum
SL003B-26A1]
Length = 604
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 8/222 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ ++Y V + GL+R V ++ N EW + LGA G G+Y T+
Sbjct: 40 VTWRDYFERACNVGHGLVARGLDRGGHVAVLSENRVEWVLAQLGAGCVGAVTIGVYPTSP 99
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK--PG--VISWD 317
+ L SD+ I V ED +QL+K+++V+ + P+L+ +V E K + P V++++
Sbjct: 100 ANEVAYVLAHSDSEIIVCEDQEQLDKVIEVRDELPRLRCVVVMETKGLRTYPADFVVAFE 159
Query: 318 ELMELG---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
L G RAA +D L ++ ++YTSG+ G K MLS+ NI A
Sbjct: 160 ALEAEGRAHRAAHPGLVDERLSAQGLDDIALMIYTSGSTGKPKGAMLSYRNIRAQAIAFA 219
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++ +A + +S+LPL H+A Q + + + + + F +
Sbjct: 220 DRIQV-TADSTHLSYLPLCHVAEQICTVMGPVYLGSQIAFGE 260
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 101 KNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGM 160
+++ + T+ L L+ ++ +GL R R++++GAAPIS ++ R+F +L +P+ EV+G
Sbjct: 324 RSLRQRLTFALCYLLVFRALQNYIGLRRARIAMTGAAPISPKIVRFFRTLGVPLVEVYGA 383
Query: 161 SECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+E +G D VG + + +I + +GE+ LK
Sbjct: 384 TESSGIALGQTLDRLIPGSVGPVVADVEARIGE-----HGELLLK 423
>gi|300778919|ref|ZP_07088777.1| long-chain-fatty-acid--CoA ligase [Chryseobacterium gleum ATCC
35910]
gi|300504429|gb|EFK35569.1| long-chain-fatty-acid--CoA ligase [Chryseobacterium gleum ATCC
35910]
Length = 592
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 20/223 (8%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNA-PEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+E+ +++ LKLG++ + +I N+ EW D G G + +Y + SPE
Sbjct: 37 QEFINEGNKISRGLLKLGIKPGDKIALITTNSRTEWAIMDFGISQIGVVSVPVYPSISPE 96
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
++ C V D + L K++KVK P L+ I ++ + G +W E+++LG
Sbjct: 97 DYEFIFNNAEIQYCFVSDKELLNKVMKVKHNIPSLQGIFTFD---NISGAANWREILDLG 153
Query: 324 RAAPDES----LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII----- 374
+ DES +D + I T + T++YTSGT G K VML+H+NI N I
Sbjct: 154 K---DESTQIEVDDLSNAINTEDLATIIYTSGTTGRPKGVMLTHNNIVSNILGAIPRIPK 210
Query: 375 -QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ F + A +SFLP+ HI + + Y +L+FA+
Sbjct: 211 KRSFDYKEA--RALSFLPICHIFERML-FYLYQYNGFSLYFAE 250
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK ++ +G + + +SG+A +ST L F + IPI E +G++E + +V++ D
Sbjct: 323 LVFSKWREGLGGEIVTL-VSGSAALSTRLNLIFQNAGIPILEGYGLTETSPVISVNSFDK 381
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLG 222
K+ VG + + KI + E G K Y N +AF + G
Sbjct: 382 MKVGTVGVPLDNLKVKIQEDGEITVKGPSVFKGYFQNEEMTREAFTEDG 430
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 438 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ N +KI+K E P +SI +G L PT+K+KR V +K+ ++ +K YD
Sbjct: 542 LGNWEKIKKIELTPEVWSIESGLLTPTLKLKRKAVKEKFIALYNKMYD 589
>gi|351730526|ref|ZP_08948217.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 618
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A + LG I+ EW +DL + GG A G+Y T++ +
Sbjct: 60 VREIAGGLMSLGFAPGECASILSNTNIEWVLADLAVLSCGGVANGIYPTDAAAQVHYLSE 119
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGRA- 325
S + VEDD+QL+K L+V+ P L+ IV ++ + + P V+S L ELGRA
Sbjct: 120 DSRTTVLFVEDDEQLDKALEVRGGLPLLRKIVVFDMEGLRSLNDPDVLSLAGLRELGRAW 179
Query: 326 ---APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL--E 380
PD + RV + + LVYTSGT G K M +H +T+ + Y L
Sbjct: 180 NTQHPDALMQRV-KACRPEDLAILVYTSGTTGKPKGAMHTHAALTY---TVRGYNTLISR 235
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
S A + FLPL HIA + Y + A L F +
Sbjct: 236 SEADETMCFLPLCHIAERMGGEYFSLYTGARLNFVEN 272
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L R+L L+ V++ +G+ R R ++GAAPIS +L +++L+L +P+ EV+GM+E GA T
Sbjct: 345 FMLARFLALNNVRKLIGIHRARFLVTGAAPISPDLVKWYLALGVPMLEVWGMTETCGAST 404
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K +G + +I DP GEI ++
Sbjct: 405 GVPASRIKPGSIGPAASYNEVRI-DP---ATGEILVR 437
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q IDR N K + ++I+KF L + EL PTMK+KR V +KY I
Sbjct: 555 EVQELIQGEIDRVNAK-FARVEQIKKFFLLDTQLTAEDEELTPTMKLKRKLVQQKYAPQI 613
Query: 481 DKFY 484
+ Y
Sbjct: 614 EAMY 617
>gi|90580779|ref|ZP_01236582.1| putative long-chain-fatty-acid-CoAligase [Photobacterium angustum
S14]
gi|90438047|gb|EAS63235.1| putative long-chain-fatty-acid-CoAligase [Vibrio angustum S14]
Length = 607
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 4/218 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
+ ++ +A A L GL+ V I N P W +D +Y +Y T++ +
Sbjct: 41 FGEQIQQLALALLCQGLQVQDKVGIFANNMPRWTVADFATLYNRCITVPIYPTSTEQQAA 100
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELG 323
+ L + + V + Q++ +++ AQCP+L+ IV P+ P +++E ++
Sbjct: 101 YILQDASVKVLFVGEQAQMDAAVEIAAQCPQLERIVALSDDVTIPEHPLACNYNEFVKQA 160
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+ LD L ++ TL+YTSGT G K VML + NI Q L+
Sbjct: 161 SGEYQQELDTRLSAQQMDDLVTLIYTSGTTGTPKGVMLDYANIASQIEAHDQRLALDEGD 220
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
S + FLPLSH+ + Y++ + +D N LK
Sbjct: 221 TS-LCFLPLSHVFERAWTFYALHRGVVNCYLSDTNKLK 257
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++KF LP FS+ GEL PT K++R + +Y I+ Y+
Sbjct: 547 KDLARFEQVKKFTLLPKSFSMDKGELTPTQKLRRKVIQDRYHKEIEHMYE 596
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y L ++LSK++ +G + G A + + R+F ++ I + +GM+E
Sbjct: 324 SYALAEKVVLSKLQAVLG-GNIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD + D +G +PG + KI + +E G + ++ Y AK F + G
Sbjct: 381 TVSCWDDSCYNPDSIGMPMPGAEVKIGEQNEILVRGPMVMRGYYNMPEETAKNFTEDGF 439
>gi|431920320|gb|ELK18355.1| Long-chain-fatty-acid--CoA ligase ACSBG1 [Pteropus alecto]
Length = 439
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
+E++ELG P+E LD V++ N+CC L+YTSGT G K VMLS DNIT+ A IQ
Sbjct: 8 EEVLELGAQVPEEDLDTVIDMQRPNQCCVLIYTSGTTGPPKGVMLSQDNITWMARYGIQS 67
Query: 377 ---FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
F ++ + +S+LPLSHI AQ D+++ M + FA+ NALK
Sbjct: 68 SSAFHSQAKREATVSYLPLSHITAQMYDLWTGMYWGMKICFAEPNALK 115
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 86/143 (60%), Gaps = 13/143 (9%)
Query: 67 WKKVTYKLQTTG-----VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ ++Q ++R + +A S L+ + L + +P RLV +L+L+KV+
Sbjct: 137 WEKIMERIQEVMARLGFIRRRMLLWAMSVMLEQNLTCLGSD-RKPVKARLVDYLVLAKVR 195
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
QA+G RC++ GAAP++ E +R FL L++ + +G+SE +G+H VS+P++++L +
Sbjct: 196 QALGFARCQLCFCGAAPMTVEAERVFLGLNLRLYSGYGLSEASGSHFVSSPNNYRLYRM- 254
Query: 182 RTIPGTQTKIVDPDEEGNGEICL 204
+ K+ + D +G G+ICL
Sbjct: 255 ------EVKLTNQDADGTGKICL 271
>gi|409122540|ref|ZP_11221935.1| long-chain-fatty-acid--CoA ligase [Gillisia sp. CBA3202]
Length = 591
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTN 260
+ ++Y V++ L LG++ + +I N EW D+G + G +Y T
Sbjct: 35 LSTQQYIDKANAVSRGLLHLGVKPNDKIALISSSNRTEWNVMDIGILQLGAQNVPIYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E + L S+A C V D + LEK+ +K +LK + ++ D G +W E++
Sbjct: 95 SQEDYEYVLNHSEATYCFVSDKEVLEKVNAIKHNT-QLKEVYSFD---DIEGCKNWTEIV 150
Query: 321 ELGR-AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
ELG+ + ++ + + + ++ TL+YTSGT G K VMLSH NI + +
Sbjct: 151 ELGKDEKSQDQVEALKDAVKEDDLATLIYTSGTTGRPKGVMLSHRNIVSDVLNSAERVPF 210
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
E+ +SFLP+ HI + + Y + +++FA+
Sbjct: 211 ETGKYVAVSFLPICHIFERMIS-YLYQYYSVSIYFAE 246
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 20/179 (11%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
+G+K + +A LQ Y Y L R LI SK K+ +G + +SG+
Sbjct: 285 SGIKHKLFYWAVELGLQ-YEPYGANGWWYEMQLSLARKLIFSKWKEGLG-GNIELIVSGS 342
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDP 194
A + L R F + +IPI E +G++E + +V+ + FK+ VGR I + KI +
Sbjct: 343 AALQPRLTRVFAAAEIPIMEGYGLTETSPVISVNDERNGGFKVGTVGRVISNVEVKIAE- 401
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+GEI K L +G + +A WF++ D+G I A GF
Sbjct: 402 ----DGEILTK----------GPNLMMGYYKDKEKTDEAIDADGWFHTGDIGEIDADGF 446
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K Q +D N K +KI+KFE P +SI +L PTMK+KR + ++Y+ +
Sbjct: 527 EVIKRIQEEVDFYNEK-FGGWEKIKKFELTPEVWSIENDQLTPTMKLKRRNIKERYKDLY 585
Query: 481 DKFY 484
+ Y
Sbjct: 586 NSIY 589
>gi|419846536|ref|ZP_14369775.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 1-6B]
gi|386413695|gb|EIJ28278.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 1-6B]
Length = 703
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 146 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 205
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 206 AEQIRNIVNNSDARLLIVQDTDMRKKADGAVEECPSLEHIITIETG-------GLDEIKA 258
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 259 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 318
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 319 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 353
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A +NA V Q +++AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 631 AARNA-AVRAEVQQWVNQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 688
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 689 RYSTLLN 695
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 41/251 (16%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q+YM + N R R ++ S +++ +G R + ++G AP+ EL +F
Sbjct: 406 QNYMKEVSANGKAGALTRTRRAAFDPIVYSSLREVLG-GRAKWIVAGGAPLDPELLAFFR 464
Query: 149 SLDIPICEVFGMSECAGA---HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+P+ E +G++E + + P F VG PG +I + +GEI +K
Sbjct: 465 GAGVPVYEGYGLTETTAPCAFNPLGTP--FHAGSVGIAFPGFSLRIAE-----DGEIQVK 517
Query: 206 EYEANVRTVAKAFLKLGLERYH---SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNS 261
R V RYH + F W+ + DLG I GF +Y T
Sbjct: 518 G-----RAV--------FPRYHKNDEATELSFTEDGWYATGDLGRIDNDGF---LYITGR 561
Query: 262 PEACLHCLVTSDANICVVEDDKQ----LEKILKVKAQCPKLKAIVQYEGKPDKPGVIS-- 315
+ + + + +E+ Q + + L + + P + A+V + K +P + +
Sbjct: 562 KKDLIITAGGKNVSPGPIEEVIQRCEFVSQALVLGDKRPFISALVTLDEKSLRPWLAAKG 621
Query: 316 WDELMELGRAA 326
DE M L AA
Sbjct: 622 LDENMSLEDAA 632
>gi|328873056|gb|EGG21423.1| hypothetical protein DFA_01307 [Dictyostelium fasciculatum]
Length = 1109
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 62/100 (62%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y ++ AKAF+KLGL V IIGFN+PEW LGAI+AGG G+YTT+SPE C
Sbjct: 171 QYRQDIYATAKAFIKLGLTSGGGVNIIGFNSPEWQMCQLGAIWAGGLPTGIYTTSSPEQC 230
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE 305
+ S+A VE++ QL K + ++ + P +KA + E
Sbjct: 231 EYFASHSEAQFICVENETQLNKYMAIRDKLPNIKAFILME 270
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 11/144 (7%)
Query: 67 WKKVTYKLQTT-----GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVK 121
W+K+ K+QTT G+K+ + N+AK ++ ++ +P Y R L+ K+
Sbjct: 477 WEKIQLKIQTTLNQSGGIKKKLVNWAKGKGIEGGYKQ-QRGEKKPKGYGFARALVFKKLL 535
Query: 122 QAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVG 181
+ +GLD+CR S AAPIS + +FLSL I + E +GMSE G +S P K VG
Sbjct: 536 KGLGLDQCRFFASTAAPISKDTLEFFLSLGITVTEAYGMSELTGPQCISYP-RAKTGSVG 594
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
+T+PG++ K+ G+ EIC+K
Sbjct: 595 KTLPGSEVKL----NPGDDEICIK 614
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 311 PGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNIT--- 367
PGV+ W++ +E GR PD +DR+ + I CTL+YTSGT G K M++ NI
Sbjct: 343 PGVLHWEDFLEQGRNVPDSEIDRISKAITAENLCTLIYTSGTTGMPKGCMMTQRNIAWTC 402
Query: 368 FNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ ++ + K IS+LPLSH+A Q V +Y+ + ++ FAD+NAL+
Sbjct: 403 YTVGSVVLHPKTGHRE-RFISYLPLSHVAEQVVTLYAPLVFGFSVSFADRNALQ 455
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADF--SIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QA I+ NL+ ++ A I+K+ P +F S EL PT K+KR ++ KY +I Y
Sbjct: 734 QAKINEINLR-LTQASSIKKYRICPREFADSGTDSELTPTQKLKRKIILAKYDDLIRDMY 792
>gi|302525577|ref|ZP_07277919.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
gi|302434472|gb|EFL06288.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
Length = 598
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 7/213 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ K++ V VAK + G+ V ++ EW D AG +Y T+
Sbjct: 45 DVTAKDFADQVAAVAKGLIAAGVGHGDRVALMSKTRYEWTLVDFAIWAAGAVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A VVE + + ++ + L+ Q EG D P + D L
Sbjct: 105 SPEQVYWILSDSAAKAVVVETGAHRKAVEEISGRLSTLEHTWQIEG--DSPAI---DRLT 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
LG DE L ++ NE T+VYTSGT G K V L+H N+ I+ F +L
Sbjct: 160 ALGAEVSDEDLHTRRRSVTANETATIVYTSGTTGRPKGVELTHRNLLAEIRADIEAFPEL 219
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
S++ FLPL+HI A+ + I + +T TL
Sbjct: 220 MEQGNSLLCFLPLAHILARAIAI-TALTARVTL 251
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+
Sbjct: 332 LVYGKLRAALG-GRCIAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTETSAAANVNTSAA 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
F++ VGR + GT +I + E G++ Y N A+A
Sbjct: 391 FRVGTVGRPVAGTSVRIAEDGEVLLKGDVVFGRYYNNPEATAEALTD------------- 437
Query: 234 FNAPEWFYS-DLGAIYAGGF 252
WF++ DLG + + GF
Sbjct: 438 ----GWFHTGDLGELDSEGF 453
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QAA+D AN K +S+A+ I+KF L DF+ GE+ P++K+KR V K Y S I+ Y
Sbjct: 540 QAAVDEAN-KQVSHAEAIKKFTVLANDFTEAGGEITPSLKLKRNVVNKNYASDIEALY 596
>gi|456888179|gb|EMF99172.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 485
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDSTSTSPGVLKMQDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
R + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RTGGSRKAEERVSAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|407775610|ref|ZP_11122903.1| AMP-dependent synthetase/ligase [Thalassospira profundimaris
WP0211]
gi|407281287|gb|EKF06850.1| AMP-dependent synthetase/ligase [Thalassospira profundimaris
WP0211]
Length = 606
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 195 DEEGNGEICLKEYEA--NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
D EG I EA VR +A+A +G+ V ++ N EW +DL + G
Sbjct: 34 DSEGKEFIPTNWQEAADQVRALARALYDIGVRPGDRVLLVSENRTEWGIADLAIMCVGAM 93
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLK-AIVQYEGKPDKP 311
YTTN+ LH + S A I ++ K + L + + AI+ E
Sbjct: 94 TVPAYTTNTERDHLHAIEDSGAAIAIISTKKLAQPFLHAALDSGRCRHAIMMEEWGQSFV 153
Query: 312 GVIS---WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
G I+ WD+L+ GR + +D + TI ++ L+YTSGT G+ K VMLSH I
Sbjct: 154 GDITISRWDDLIAKGRGLTHD-VDAWISTIKRDDLACLIYTSGTGGSPKGVMLSHGAILS 212
Query: 369 NAACIIQYFKLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
N C+ + +E+ + +SFLPLSH T +Y +++ A +++A+
Sbjct: 213 N--CMGAFDIIETLGIDEEIFLSFLPLSHSYEHTAGLYFPISIDAQIYYAE 261
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 128 RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGT 187
R + +SG P++ EL F+S I I + +G +E A + + ++ KL VG + G
Sbjct: 349 RIKAMVSGGGPLNYELGVLFVSCGIRILQGYGQTEFAPVVSCNRAENNKLRTVGPPMVGA 408
Query: 188 QTKIVDPDEEGNGEICLK 205
+ KI + +GEI L+
Sbjct: 409 EVKIAE-----DGEILLR 421
>gi|374597457|ref|ZP_09670461.1| AMP-dependent synthetase and ligase [Gillisia limnaea DSM 15749]
gi|373872096|gb|EHQ04094.1| AMP-dependent synthetase and ligase [Gillisia limnaea DSM 15749]
Length = 591
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 7/217 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTN 260
+ ++Y T+++ L+LG++ + +I N EW D+G + G +Y T
Sbjct: 35 LSTQQYVDKANTISRGLLRLGVKPNDKIALISSSNRTEWNIMDIGILQLGAQDVPIYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E + L S+A C V D + LEK+ +K + KLK + ++ + G +W E++
Sbjct: 95 SEEDYEYVLNHSEAIYCFVSDLEVLEKVNAIKERT-KLKEVYCFD---EIEGCKNWKEVL 150
Query: 321 ELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
LG ++ ++++ + + ++ TL+YTSGT G K VMLSH+NI N
Sbjct: 151 ALGEDKSNQDEVEKLKKAVQPDDLATLIYTSGTTGRPKGVMLSHNNIVSNVLGSASRVPF 210
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
E + +SFLP+ HI + + +Y + +++FA+
Sbjct: 211 EFGTYTALSFLPICHIFERMI-LYLYQYYSVSIYFAE 246
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
+ R +I SK K+ +G + +SG+A + L R F + +IP+ E +G++E + V+
Sbjct: 318 IARKIIFSKWKEGLG-GNIELIVSGSAALQPRLARVFAAAEIPVMEGYGLTETSPVIAVN 376
Query: 171 APDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ FK+ VG+ I Q KI + +GEI K
Sbjct: 377 DQRNHGFKIGSVGKVIDKVQVKIAE-----DGEILTK 408
>gi|297562072|ref|YP_003681046.1| AMP-dependent synthetase and ligase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296846520|gb|ADH68540.1| AMP-dependent synthetase and ligase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 599
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ + E A++ AKA + G+E V ++ EW D GG +Y T+
Sbjct: 45 DVTVAELHADIAAYAKALIDAGIEHGDRVALMSRTRYEWTVVDYAIWSVGGVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VE+D E++ V+A+ P+L + ++ D PG + EL
Sbjct: 105 SAEQIEWILTDSGAKAAFVENDAHAERVESVRARTPELGPVWRF----DDPG---YAELR 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
G DE+L++ + ++ TL+YTSGT G K L+H N F I + LE
Sbjct: 158 SAGSEVSDEALEKRRTGVKADDLATLIYTSGTTGRPKGCELTHRNFLF-----ISHNALE 212
Query: 381 SAALSVIS---------FLPLSHIAAQTVDIYSVMTVAATL 412
A V+ FLPL+H+ A+ V + V+ ATL
Sbjct: 213 GPARQVLRSKENPSTLLFLPLAHVFARFVQVM-VIEARATL 252
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
AD NA A Q A+D AN ++S A+ I+KF+ LP+DF+ +G++ ++KVKR V K
Sbjct: 534 ADLNA-----AIQEAVDNAN-NAVSKAEGIKKFKILPSDFTEESGQMTASLKVKRHVVSK 587
Query: 475 KYQSIIDKFY 484
++ ID Y
Sbjct: 588 QWSKEIDDIY 597
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 27/150 (18%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ K+ A+G ++SG + + L +F + I E +G++E +
Sbjct: 328 HALFSKLVYGKLLAALG-GNAEYAVSGGSALGARLGHFFRGIGFTIIEGYGLTETTAPTS 386
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK------EYEANVRTVAKAFLKLG 222
V++P+ K+ VG+ +PGT +I + +GEI LK Y N + +AF + G
Sbjct: 387 VNSPEFNKIGTVGQPLPGTTIRIAE-----DGEILLKGDHIMVGYWKNEKATKEAFTEDG 441
Query: 223 LERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
R DLGA+ GF
Sbjct: 442 FYR---------------TGDLGALDDDGF 456
>gi|121611015|ref|YP_998822.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
gi|121555655|gb|ABM59804.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
Length = 623
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 10/215 (4%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A + L I+ +W +DL + G A G+Y T++ +
Sbjct: 65 VREIACGLMALDFAPGDCASILSNTNTDWVLADLAILSCAGVANGIYPTDAAAQVHYLSQ 124
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGRA- 325
S ++ VEDD+QL+K L V+A P L+ I+ ++ D PGV+ D L LGRA
Sbjct: 125 DSGTSVLFVEDDEQLDKALAVRADLPGLRKIIVFDMDGLRHLDDPGVLGLDALRALGRAW 184
Query: 326 ---APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
PD +L+R ++ + LVYTSGT G K M +H +T+ Q+ +
Sbjct: 185 SQQHPD-ALERRVQDCRPEDLAILVYTSGTTGKPKGAMHTHRALTYTVRGYNQWIA-RTE 242
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
++ FLPL HIA + Y + A L F +
Sbjct: 243 DDELVCFLPLCHIAERMGGEYFSLYTGARLNFVEN 277
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L RWL+L+ V++ +G+ R R ++GAAPIS +L +++L+L +P+ EV+G +E GA T
Sbjct: 350 FWLARWLVLNNVRKLIGIHRARFLITGAAPISPQLIKWYLALGVPMLEVWGQTETCGAAT 409
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHS 228
K +G + ++ + +GE+ ++ V K +L L + +
Sbjct: 410 NMPASRIKPGSIGLAANYNEVRV----DAASGELLVRG-----PNVFKGYLNLPEKTAET 460
Query: 229 VCIIGFNAPEWFYS-DLGAIYAGGF 252
+ +A W ++ D+G I A G+
Sbjct: 461 I-----DADGWLHTGDVGQIDADGY 480
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 414 FADKNALKVYKATQAAI----DRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR 469
F+D +L A QA I +R N + + ++I+KF L S EL PTMK+KR
Sbjct: 549 FSDYASLTRSHAVQALIQADVERVNAR-FARVEQIKKFFLLDTRLSAEDEELTPTMKLKR 607
Query: 470 PFVVKKYQSIIDKFY 484
V KY + I+ Y
Sbjct: 608 KLVQSKYAAQIEAMY 622
>gi|227545908|ref|ZP_03975957.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
longum ATCC 55813]
gi|227213542|gb|EEI81391.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 703
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 146 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 205
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 206 AEQIRNIVNNSDARLLIVQDTDMRKKADGAVEECPSLEHIITIETG-------GLDEIKA 258
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 259 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 318
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 319 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 353
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A KNA V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 631 AAKNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 688
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 689 RYSTLLN 695
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 28/169 (16%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q+YM + N R R ++ S +++ +G R + ++G AP+ EL +F
Sbjct: 406 QNYMKEVSANGKAGALTRTRRAAFDPIVYSSLREVLG-GRAKWIVAGGAPLDPELLAFFR 464
Query: 149 SLDIPICEVFGMSECAGAHTVSA-PDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEY 207
+P+ E +G++E S F VG PG +I + +GEI +K
Sbjct: 465 GAGVPVYEGYGLTETTAPCAFSPLGTPFHAGSVGIAFPGFSLRIAE-----DGEIQVKG- 518
Query: 208 EANVRTVAKAFLKLGLERYH---SVCIIGFNAPEWFYS-DLGAIYAGGF 252
R V RYH + F W+ + DLG I GF
Sbjct: 519 ----RAV--------FPRYHKNDEATELSFTEDGWYVTGDLGRIDNDGF 555
>gi|160885360|ref|ZP_02066363.1| hypothetical protein BACOVA_03359 [Bacteroides ovatus ATCC 8483]
gi|156108982|gb|EDO10727.1| AMP-binding enzyme [Bacteroides ovatus ATCC 8483]
Length = 604
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K++ VR A AF+ LG+E ++ I N PEWFY D GA Y T+S
Sbjct: 36 ISWKQFSGTVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRVVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRFLFVGEQYQYDAAFSIFGFCSSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M +G P +++++ E + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMAMGEGLPHNDTVEERTERASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ +S FLPL+H+
Sbjct: 209 FHTHDDRLTTMSDKDVSMNFLPLTHV 234
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETTGLKKALMLDAIRVGRIHNLDYLRQGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLK 220
VG +PG + KI EGN EI L+ +T+ K + K
Sbjct: 398 GSVGVVLPGIEVKI----GEGN-EILLRG-----KTITKGYYK 430
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A ID + ++ ++I++F LP FS+ GEL T+K+KR V K Y I
Sbjct: 537 KIVGLFRARIDTLQ-QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRAVVAKNYSEQI 595
Query: 481 DKFYD 485
+K Y+
Sbjct: 596 EKMYE 600
>gi|429747948|ref|ZP_19281179.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429161888|gb|EKY04254.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 590
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
EY V TV++ L+LG+E+ + +I N EW D+G + G +Y T + E
Sbjct: 39 EYIQKVNTVSRGLLRLGIEKNDKIAVISSTNRTEWHVLDIGILQVGAQNVPIYPTINLED 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L S+ CVV D + EKI ++ + P LK I + D P W E+++LG
Sbjct: 99 FEYILNHSECKYCVVSDKELWEKISSIQDKLPHLKTIFTFN---DVPYAHHWQEILDLGA 155
Query: 325 AAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+++ ++ ++I ++ T++YTSGT K VMLSH NI N + +
Sbjct: 156 DESNQAEVEARKDSIQKDDLATIIYTSGTTSRPKGVMLSHWNIISNILNCQDRLPITEGS 215
Query: 384 LSVISFLPLSHI 395
+ +SFLP+ H+
Sbjct: 216 -TALSFLPVCHV 226
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+KR + +A + Q Y Y + ++ R LI SK ++A+G R ++ +SG+A
Sbjct: 286 GIKRKLFFWALNLGFQ-YEPYGANGAWYQFKLKIARKLIFSKWREALG-GRIQMIVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+S L + F + + I E +G++E A V+ +K+ VG+ I + KI +
Sbjct: 344 ALSPRLAKVFSAAGLKIMEGYGLTETAPVIAVNRESGRYWKIGTVGKPIVNIEVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI +K
Sbjct: 402 ---DGEILVK 408
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 426 TQAAIDR--ANLKSISNA----QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
QA DR ++ ++N ++++ F+F P +++I G L PT+K+KR + +KY I
Sbjct: 524 NQAVHDRIAKEVEKVNNHLGKWEQVKLFDFTPDEWTIDGGHLTPTLKLKRRVIKEKYIDI 583
Query: 480 IDKFYD 485
+KFY+
Sbjct: 584 YNKFYN 589
>gi|317482191|ref|ZP_07941213.1| AMP-binding enzyme [Bifidobacterium sp. 12_1_47BFAA]
gi|316916329|gb|EFV37729.1| AMP-binding enzyme [Bifidobacterium sp. 12_1_47BFAA]
Length = 677
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATVYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D EK +CP L+ I+ E DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDTDMREKADGSVEECPSLEHIITIETG-------GLDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGAGISDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPTYMPELL 292
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V+ ++ A
Sbjct: 293 HDKKNTILLFLPQAHSFARAIN-YIVVASNVHIYIA 327
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A KNA V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 605 AAKNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 662
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 663 RYSTLLN 669
>gi|229817578|ref|ZP_04447860.1| hypothetical protein BIFANG_02846 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785367|gb|EEP21481.1| hypothetical protein BIFANG_02846 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 671
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
E+ A R +AK +K GL++ V + EW +D + GG A +Y T+S E
Sbjct: 117 NEFLAETRAIAKGLMKYGLKKGDGVAFMCRTCYEWNLTDAAIMAVGGVLATIYDTDSAEQ 176
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + +V+D EK +CP L+ I+ DEL G
Sbjct: 177 IRNIVNNSDARLLIVQDTDMREKADGAIEECPSLEHIITIN-------TGGLDELKAYGA 229
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF--KLESA 382
DE LD +E++ + C++VYTSG+ A K V ++H++ A + + L
Sbjct: 230 GVTDEELDERIESVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCATALNLPDFMPEMLSDK 289
Query: 383 ALSVISFLPLSHIAAQTVD 401
+V+ FLP +H A+ ++
Sbjct: 290 RNTVLLFLPQAHSFARAIN 308
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q YM + + T R R ++ + +++ +G R + ++G AP+ +L +F
Sbjct: 374 QTYMQEISEKGKASLTVRARRAAFDPMVYAPLREVLG-GRAKWIVAGGAPLDPKLLEFFR 432
Query: 149 SLDIPICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKE 206
++P+ E +G++E + + P + F VG PG +I + E + G
Sbjct: 433 GANVPVYEGYGLTETTAPCSFTVPGETFHQGSVGTAFPGFSLRIAEDGEVQVKGTSVFPR 492
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
Y N AF + G W+ + DLG I GF
Sbjct: 493 YHKNEEATESAFTEDG----------------WYATGDLGRIDNDGF 523
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 395 IAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADF 454
+A++ +D + M AA+ NA V Q +D+AN + +S A+ ++KF LP +F
Sbjct: 585 LASKGLDEHMSMEEAAS------NA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEF 636
Query: 455 SIPTGELGPTMKVKRPFVVKKYQSIID 481
+ G + +MKV RP V+K Y ++++
Sbjct: 637 TQENGLMTASMKVIRPKVIKHYATLLN 663
>gi|429749907|ref|ZP_19282989.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429166585|gb|EKY08552.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 590
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 13/221 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTT 259
E EY V TV++ L+LG+E+ + +I N +W D+G + G +Y T
Sbjct: 34 ETSTDEYIKKVNTVSRGLLRLGIEKNDKIAVISSNNRTDWHILDIGILQVGAQNVPIYPT 93
Query: 260 NSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDEL 319
+ + + L S+ CVV D EKI +K + P LK I ++ D P +W+E+
Sbjct: 94 ITADDFEYILNHSECKYCVVSDVVLYEKIKAIKDKLPHLKTIYTFD---DVPNAQNWNEI 150
Query: 320 MELGRAAPDESLDRVLE----TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
+ LG DES +E +I ++ T++YTSGT K VMLSH NI N
Sbjct: 151 IALG---ADESNQNEVEARKNSIDKHDLATIIYTSGTTSRPKGVMLSHWNIISNIINCQD 207
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+++ + + +SFLP+ H+ + + Y L+FA+
Sbjct: 208 RLPVKTGS-TALSFLPVCHVFERML-TYLYQYDGLQLYFAE 246
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ TG+KR + +A + + Y Y E ++ LI +K ++A+G R + +S
Sbjct: 283 ELTGIKRTLFFWALNLGFR-YKPYGENGWWYELQLKIANKLIFNKWREALG-GRVEMIVS 340
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS--APDDFKLDGVGRTIPGTQTKIV 192
G+A +S L + F + + I E +G++E A +V+ A +K+ VG+ + Q KI
Sbjct: 341 GSAALSPRLAKVFSAAGLTIMEGYGLTETAPVISVNREAGRYWKIGTVGKPVNNVQVKIA 400
Query: 193 DPDEEGNGEICLK 205
+ +GEI +K
Sbjct: 401 E-----DGEILVK 408
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 430 IDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
++R N + + ++++ F F P +++I G L PT+K+KR + +KY I +KFY+
Sbjct: 535 VERVN-QRLGKWEQVKLFAFTPDEWTIDDGHLTPTLKLKRRVIKEKYIDIYNKFYN 589
>gi|312132863|ref|YP_004000202.1| acsa1 [Bifidobacterium longum subsp. longum BBMN68]
gi|311773832|gb|ADQ03320.1| AcsA1 [Bifidobacterium longum subsp. longum BBMN68]
Length = 677
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDTDMRKKADGAVEECPSLEHIITIETG-------GLDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 292
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 293 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 327
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A KNA V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 605 AAKNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 662
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 663 RYSTLLN 669
>gi|398821369|ref|ZP_10579835.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
gi|398227962|gb|EJN14118.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
Length = 612
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E+ + +A A +G+ I+ PEW Y+D+G + AGG ++G+Y T+S
Sbjct: 44 REWLEISKEIAYALRAIGMMPGDVASIVANAVPEWVYADMGILCAGGVSSGIYPTDSSSQ 103
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISWDELM 320
+ + S + ED++QL+KIL +A+CP L+ I+ ++ + + V+S DE
Sbjct: 104 VEYLVNDSRTKVIFAEDEEQLDKILACRARCPSLQKIIVFDMEGLRGFCDDMVMSLDEFR 163
Query: 321 ELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
LGR + ++++ + LVYTSGT G K M ++ ++T +
Sbjct: 164 ALGRNHMVGREALWQEMIDSRGAGDLAILVYTSGTTGPPKGAMHANRSVTHQMRHANDFI 223
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +I FLPL H+A + Y + + + + FA+
Sbjct: 224 PAQEDDDRLI-FLPLCHVAERIGGYYISVALGSVMNFAE 261
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 9/107 (8%)
Query: 99 LEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVF 158
L ++ + YR+ +++ +GLDRCR++ +GAAPI+ EL R++L+L I + E++
Sbjct: 329 LSLRLASRFAYRIA----FRNIRRMIGLDRCRIAFTGAAPIAPELIRWYLALGIDMHELY 384
Query: 159 GMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
G +E G T+ + KL VG +P + + PD GEI ++
Sbjct: 385 GQTENCGVATMMPAERMKLGSVGTAVPWGEVAL-SPD----GEILIR 426
>gi|420149889|ref|ZP_14657057.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394753086|gb|EJF36691.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 590
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
EY V TV++ L+LG+E+ + +I N EW D+G + G +Y T + E
Sbjct: 39 EYIQKVNTVSRGLLRLGIEKNDKIAVISSTNRTEWHVLDIGILQVGAQNVPIYPTINLED 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L S+ CVV D + EKI ++ + P LK I + D P W E+++LG
Sbjct: 99 FEYILNHSECKYCVVSDKELWEKISSIQDKLPHLKTIFTFN---DVPYAHHWQEILDLGA 155
Query: 325 AAPDESLDRVL-ETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+++ V ++I ++ T++YTSGT K VMLSH NI N + +
Sbjct: 156 DESNQAEVEVRKDSIQKDDLATIIYTSGTTSRPKGVMLSHWNIISNILNCQDRLPITEGS 215
Query: 384 LSVISFLPLSHI 395
+ +SFLP+ H+
Sbjct: 216 -TALSFLPVCHV 226
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+KR + +A + + Y Y + +L R LI SK ++A+G R ++ +SG+A
Sbjct: 286 GIKRKLFFWALNLGFK-YEPYGANGAWYQFKLKLARKLIFSKWREALG-GRIQMIVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+S L + F + + I E +G++E A V+ +K+ VG+ I KI +
Sbjct: 344 ALSPRLAKVFSAAGLKIMEGYGLTETAPVIAVNRESGRYWKIGTVGKPIVNIDVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI +K
Sbjct: 402 ---DGEILVK 408
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 426 TQAAIDR--ANLKSISNA----QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
QA DR ++ ++N ++++ F+F P +++I G L PT+K+KR + +KY I
Sbjct: 524 NQAVHDRIAKEVEKVNNHLGKWEQVKLFDFTPDEWTIDGGHLTPTLKLKRRVIKEKYIDI 583
Query: 480 IDKFYD 485
+KFY+
Sbjct: 584 YNKFYN 589
>gi|424851481|ref|ZP_18275878.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356666146|gb|EHI46217.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 595
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 115/260 (44%), Gaps = 16/260 (6%)
Query: 160 MSECAGAHTVSAPDDFKL-DGVGRTIPGTQTKIVDPDEEGNG---EICLKEYEANVRTVA 215
M E + + S P+D + D V R K V GNG ++ E+ V VA
Sbjct: 1 MREFSVPQSFSIPEDASMADTVFRHAE-EDPKFVPFKRPGNGGWVDVTAAEFAEQVSAVA 59
Query: 216 KAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDAN 275
K + G+E V I+ EW D AGG +Y T++P+ L S +
Sbjct: 60 KGLIASGVELGDRVAILSATRYEWVVIDYAIWTAGGCTVAIYETSAPDQAKWILEDSGTS 119
Query: 276 ICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVL 335
+ VVE+ KQ + + V P L+ ++Q EG G I DEL + G DE L
Sbjct: 120 LLVVENAKQADALKVVTDAAPDLREVLQIEG-----GAI--DELSKRGEGVTDEQLHERR 172
Query: 336 ETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI-IQYFKLESAALSVISFLPLSH 394
+ + TL+YTSGT G K V L+H N +A + + A + FLPL+H
Sbjct: 173 HQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAESAAVKLALSDAMYAGRRTLMFLPLAH 232
Query: 395 IAAQTVDIYSV---MTVAAT 411
+ A+ + + +TVA T
Sbjct: 233 VFARAISFGAFDAKVTVAHT 252
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G C ++SG A + L +F + +P+ E +G++E + A +V+
Sbjct: 330 LVYSKLRTALG-GECDRAVSGGAALGARLGHFFRGIGVPVYEGYGLTETSAAISVNTTRA 388
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG+ I G KI + +GE+ LK
Sbjct: 389 QKVGTVGKPIDGHAAKIGE-----DGELLLK 414
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +SN ++I+K+ L DF+ TGEL PT+K+KR + K++ + I+ Y
Sbjct: 546 KKVSNPERIKKYRILEVDFTQETGELTPTLKLKRNVIHKEHGAAIEAIY 594
>gi|116328213|ref|YP_797933.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116120957|gb|ABJ79000.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
Length = 681
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDSTSTSPGVLKMQDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
R + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RTDGSRKAEERVSAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPIWHVFERVVEYVCIGLGAATYY 247
>gi|119716843|ref|YP_923808.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
gi|119537504|gb|ABL82121.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 610
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 4/204 (1%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD G + ++ VRT+A L LG+ V I+ EW +DL + AG
Sbjct: 39 PDGAGWRSVTWRQTGETVRTLAAGLLALGIRPEERVAILSNTRVEWLEADLAIMCAGAAT 98
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y T S + L S + I EDD Q+ K+ + P L +V ++G+ D V
Sbjct: 99 TTVYPTTSADDVAFILGDSGSRIAFAEDDTQVAKLRSRRDHLPDLIRVVTFDGQADGEWV 158
Query: 314 ISWDELMELGRAAPDE---SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
+S +L+ LG E ++D+ + I + TL+YTSGT G K V L H T+
Sbjct: 159 LSLRDLVALGARHLVEHPGAVDQAVAAIGPEDLATLIYTSGTTGQPKGVELPHRCWTYIG 218
Query: 371 ACIIQYFKLESAALSVISFLPLSH 394
+ + L +A + + +LPLSH
Sbjct: 219 SAADRLGILSAADVQFL-WLPLSH 241
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPY---TYRLVRWLILSKVKQAMGLDRCRVSLS 134
GVK + N+A + A LE + + + L+L+K+++ +G R R +S
Sbjct: 302 GVKHRLFNWAFRVGDRVARARLEGRRPSTFDAAQHAVADRLVLAKIRERLG-GRIRFLVS 360
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G+A +S ++ R+F + D+ + E +G++E + + PDD VGR + GT+ +I
Sbjct: 361 GSAALSPDVGRWFHAADLLVLEGYGLTETSAGTCMVLPDDAVFGAVGRPLDGTELRIAS- 419
Query: 195 DEEGNGEICLK 205
+GEI ++
Sbjct: 420 ----DGEIFVR 426
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V+ A ++ N + ++ + I++F L D S+ GEL P+MKV+R + Y ++
Sbjct: 545 EVHGYVAACVEELNGR-LNRWETIKQFRILDHDLSVEGGELTPSMKVRRKVIETTYHDLL 603
Query: 481 DKFY 484
D Y
Sbjct: 604 DSMY 607
>gi|315225626|ref|ZP_07867435.1| possible long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea
F0287]
gi|420159315|ref|ZP_14666122.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314944443|gb|EFS96483.1| possible long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea
F0287]
gi|394762613|gb|EJF44832.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 590
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
EY V TV++ L+LG+E+ + +I N EW D+G + G +Y T + E
Sbjct: 39 EYIQKVNTVSRGLLRLGIEKNDKIAVISSTNRTEWHVLDIGILQVGAQNVPIYPTINLED 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L S+ CVV D + EKI ++ + P LK I + D P W E+++LG
Sbjct: 99 FEYILNHSECKYCVVSDKELWEKISSIQDKLPHLKTIFTFN---DVPYAHHWQEILDLGA 155
Query: 325 AAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+++ ++ ++I ++ T++YTSGT K VMLSH NI N + +
Sbjct: 156 DESNQAEVEARKDSIQKDDLATIIYTSGTTSRPKGVMLSHWNIISNILNCQDRLPITEGS 215
Query: 384 LSVISFLPLSHI 395
+ +SFLP+ H+
Sbjct: 216 -TALSFLPVCHV 226
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+KR + +A Q Y Y + ++ R LI SK ++A+G R ++ +SG+A
Sbjct: 286 GIKRKLFFWALDLGFQ-YEPYGANGAWYQFKLKIARKLIFSKWREALG-GRIQMIVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+S L + F + + I E +G++E A V+ +K+ VG+ I + KI +
Sbjct: 344 ALSPRLAKVFSAAGLKIMEGYGLTETAPVIAVNRESGRFWKIGTVGKPIVNIEVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI +K
Sbjct: 402 ---DGEILVK 408
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 426 TQAAIDR--ANLKSISNA----QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
QA DR ++ ++N ++++ F+F P +++I G L PT+K+KR + +KY I
Sbjct: 524 NQAVHDRIAKEVEKVNNHLGKWEQVKLFDFTPDEWTIDGGHLTPTLKLKRRVIKEKYIDI 583
Query: 480 IDKFYD 485
+KFY+
Sbjct: 584 YNKFYN 589
>gi|300710198|ref|YP_003736012.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|448297030|ref|ZP_21487078.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|299123881|gb|ADJ14220.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|445580212|gb|ELY34598.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
Length = 647
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A F LG + V I EW +D G + AG +Y +SP + L
Sbjct: 73 VRNLAAGFRDLGAKAGDRVGIFADTRMEWAQTDFGLLAAGAVVTTVYAGSSPNQVEYLLS 132
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDELMELGRAAP 327
+DA VVE+ ++LE++L V+ + L IV + EG ++ V++ EL + G AA
Sbjct: 133 DADATGVVVENKERLERVLAVEDEL-DLSFIVVMDRTEGYDEREDVLTLAELHDRGEAAF 191
Query: 328 D-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF----KLESA 382
D E+ + ++ +A + TL+YTSGT G K V L+H N+ N + F E+
Sbjct: 192 DREAYEDWVDAVAPEDLATLIYTSGTTGQPKGVELTHRNLRANVTQCRKRFGPRPDKEAK 251
Query: 383 ALSVI-------SFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L I SFLPL+H+ +T + + A + +A+
Sbjct: 252 GLPAIDGETRTVSFLPLAHVLERTAGHFLMFASGAAVAYAE 292
>gi|429752758|ref|ZP_19285597.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429175768|gb|EKY17188.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 590
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
EY V TV++ L+LG+E+ + +I N EW D+G + G +Y T + E
Sbjct: 39 EYIQKVNTVSRGLLRLGIEKNDKIAVISSTNRTEWHVLDIGILQVGAQNVPIYPTINLED 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L S+ CVV D + EKI ++ + P LK I + + P W E+++LG
Sbjct: 99 FEYILNHSECKYCVVSDKELWEKISSIQDKLPHLKTIFTFN---EVPYAHHWQEILDLGA 155
Query: 325 AAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
++S ++ ++I ++ T++YTSGT K VMLSH NI N + S
Sbjct: 156 DESNQSEVETRKDSIQKDDLATIIYTSGTTSRPKGVMLSHWNIISNILNCQDRLPI-SEG 214
Query: 384 LSVISFLPLSHI 395
+ +SFLP+ H+
Sbjct: 215 STALSFLPVCHV 226
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+KR + +A Q Y Y + ++ R LI SK ++A+G R ++ +SG+A
Sbjct: 286 GIKRKLFFWALDLGFQ-YEPYGANGAWYEFKLKIARKLIFSKWREALG-GRIQMIVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+S L + F + + I E +G++E A V+ +K+ VG+ I KI +
Sbjct: 344 ALSPRLAKVFSAAGLKIMEGYGLTETAPVIAVNRESGRFWKIGTVGKPIVNIDVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI +K
Sbjct: 402 ---DGEILVK 408
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V+ +++ N + ++++ F+F P +++I G L PT+K+KR + +KY I +
Sbjct: 527 VHNRIAQEVEKVN-SHLGKWEQVKLFDFTPDEWTIDGGHLTPTLKLKRRVIKEKYIDIYN 585
Query: 482 KFYD 485
KFY+
Sbjct: 586 KFYN 589
>gi|23465432|ref|NP_696035.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum NCC2705]
gi|23326082|gb|AAN24671.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum NCC2705]
Length = 703
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 146 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATVYDTDS 205
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 206 AEQIRNIVNNSDARLLIVQDTDMRKKADGAVEECPSLEHIITIETG-------GLDEIKA 258
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 259 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 318
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 319 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 353
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A KNA V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 631 AAKNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 688
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 689 RYSTLLN 695
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 28/169 (16%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q+YM + N R R ++ S +++ +G R + ++G AP+ EL +F
Sbjct: 406 QNYMKEVSANGKAGALTRTRRAAFDPIVYSSLREVLG-GRAKWIVAGGAPLDPELLAFFR 464
Query: 149 SLDIPICEVFGMSECAGAHTVSA-PDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEY 207
+P+ E +G++E S F VG PG +I + +GEI +K
Sbjct: 465 GAGVPVYEGYGLTETTAPCAFSPLGTPFHAGSVGIAFPGFSLRIAE-----DGEIQVKG- 518
Query: 208 EANVRTVAKAFLKLGLERYH---SVCIIGFNAPEWFYS-DLGAIYAGGF 252
R V RYH + F W+ + DLG I GF
Sbjct: 519 ----RAV--------FPRYHKNDEATELSFTEDGWYVTGDLGRIDNDGF 555
>gi|436842134|ref|YP_007326512.1| putative AMP-dependent synthetase and ligase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432171040|emb|CCO24411.1| putative AMP-dependent synthetase and ligase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 636
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 111/217 (51%), Gaps = 16/217 (7%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y A +G ++ ++ IIG N PEW ++ L GGF+ G+Y + +
Sbjct: 40 RQYLTITSEFAAGLKYMGFDKGDAIVIIGDNRPEWLWAQLAIQGLGGFSVGLYQDSPADE 99
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELM 320
+ S+A + V ED +Q++KIL ++ Q P L+ I+ ++ K D G++S+DE+
Sbjct: 100 IGYVFTLSEAKLVVAEDQEQVDKILSIRDQLPALRYIIYHDPKGLVDYDVNGLMSFDEVR 159
Query: 321 ELGRAAPDES--LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
EL + D++ + ++ + ++ + TSG+ G K ML+H+N+ + A +
Sbjct: 160 ELNK---DQAYLFEVWAKSTSPDDVAIIATTSGSTGRPKLAMLTHENL-LSMAWNLGDSD 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+ + +SFLPL+ + Q +M VA+ L F
Sbjct: 216 PKQESDEFVSFLPLAWMGEQ------MMAVASALLFG 246
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 74 LQTTGVKRWIANYAKSTSLQHYMAYLEKNVS-------EPYTYRLVRWLILSKVKQAMGL 126
++TT KRWI N L Y EK + E Y++ + ++ +G
Sbjct: 289 METTPFKRWIFNLL----LPMGTGYAEKVLRGEKPGAIETLGYKIAEIGLFRALRDRLGF 344
Query: 127 DRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPG 186
R R + +G AP+ + +F ++ I + +++G +E AG + + D VG IP
Sbjct: 345 SRIRSASTGGAPLGPDTFNFFHAMGINLKQIYGQTEIAGISCIHKDGEVNFDTVGEPIPE 404
Query: 187 TQTKIVDPDEEGNGEIC----------LKEYEANVRTVAKAFLKLG 222
T+ KI D GEI LK EA T+ +LK G
Sbjct: 405 TKIKISD-----EGEILSKSPAVFKGYLKNEEATAETLENGWLKSG 445
>gi|322690953|ref|YP_004220523.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320455809|dbj|BAJ66431.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 677
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDTDMRKKADGAVEECPSLEHIITIETG-------GLDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 292
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 293 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 327
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A KNA V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 605 AAKNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 662
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 663 RYSTLLN 669
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 28/169 (16%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q+YM + N R R ++ S +++ +G R + ++G AP+ EL +F
Sbjct: 380 QNYMKEVSANGKAGALTRTRRAAFDPIVYSSLREVLG-GRAKWIVAGGAPLDPELLAFFR 438
Query: 149 SLDIPICEVFGMSECAGAHTVSA-PDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEY 207
+P+ E +G++E S F VG PG +I + +GEI +K
Sbjct: 439 GAGVPVYEGYGLTETTAPCAFSPLGTPFHAGSVGIAFPGFSLRIAE-----DGEIQVKG- 492
Query: 208 EANVRTVAKAFLKLGLERYH---SVCIIGFNAPEWFYS-DLGAIYAGGF 252
R V RYH + F W+ + DLG I GF
Sbjct: 493 ----RAV--------FPRYHKNDEATELSFTEDGWYVTGDLGRIDNDGF 529
>gi|239622044|ref|ZP_04665075.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|384201660|ref|YP_005587407.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
longum KACC 91563]
gi|419856114|ref|ZP_14378851.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 44B]
gi|239515235|gb|EEQ55102.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|338754667|gb|AEI97656.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
longum KACC 91563]
gi|386413871|gb|EIJ28446.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 44B]
Length = 677
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDTDMRKKADGAVEECPSLEHIITIETG-------GLDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 292
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 293 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 327
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A +NA V Q +++AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 605 AARNA-AVRAEVQQWVNQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 662
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 663 RYSTLLN 669
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 41/251 (16%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q+YM + N R R ++ S +++ +G R + ++G AP+ EL +F
Sbjct: 380 QNYMKEVSANGKAGALTRTRRAAFDPIVYSSLREVLG-GRAKWIVAGGAPLDPELLAFFR 438
Query: 149 SLDIPICEVFGMSECAGA---HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+P+ E +G++E + + P F VG PG +I + +GEI +K
Sbjct: 439 GAGVPVYEGYGLTETTAPCAFNPLGTP--FHAGSVGIAFPGFSLRIAE-----DGEIQVK 491
Query: 206 EYEANVRTVAKAFLKLGLERYH---SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNS 261
R V RYH + F W+ + DLG I GF +Y T
Sbjct: 492 G-----RAV--------FPRYHKNDEATELSFTEDGWYATGDLGRIDNDGF---LYITGR 535
Query: 262 PEACLHCLVTSDANICVVEDDKQ----LEKILKVKAQCPKLKAIVQYEGKPDKPGVIS-- 315
+ + + + +E+ Q + + L + + P + A+V + K +P + +
Sbjct: 536 KKDLIITAGGKNVSPGPIEEVIQRCEFVSQALVLGDKRPFISALVTLDEKSLRPWLAAKG 595
Query: 316 WDELMELGRAA 326
DE M L AA
Sbjct: 596 LDENMSLEDAA 606
>gi|284928783|ref|YP_003421305.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
gi|284809242|gb|ADB94947.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
Length = 638
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 16/242 (6%)
Query: 191 IVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAG 250
+ DP + ++ + ++ A LG+ +C+I N+P WF +D G++ AG
Sbjct: 30 LYDPHSKPEVKLTFSQLYEQLKIFAAGLQSLGIVENDKICLIADNSPRWFIADQGSMLAG 89
Query: 251 GFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK 310
A + + P LH L SD++I +VED K LEK+ Q L+ I+ +
Sbjct: 90 ASNAVRSSQSDPNELLHILQDSDSSILIVEDIKTLEKLYSFSDQF-NLRLIILLSNEKSN 148
Query: 311 ----PGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI 366
V+++ ELM+LG+ S+ + + TL+YTSGT G K MLSH NI
Sbjct: 149 LEIPVKVLNFTELMKLGKNFDLRSIVK-----KDTDLATLIYTSGTTGKPKGAMLSHGNI 203
Query: 367 TFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD----KNALKV 422
+ K + ++S LP H ++ + Y +++ TL + + KN LK
Sbjct: 204 LHQIRSLDTIIKPKPGD-RILSILPSWHSYERSAE-YFLLSQGCTLIYTNIRNFKNDLKK 261
Query: 423 YK 424
+K
Sbjct: 262 FK 263
>gi|237720321|ref|ZP_04550802.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|336415414|ref|ZP_08595754.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|423290471|ref|ZP_17269320.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|423294228|ref|ZP_17272355.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
gi|229450072|gb|EEO55863.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|335941010|gb|EGN02872.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|392665858|gb|EIY59381.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|392675419|gb|EIY68860.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
Length = 604
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K++ VR A AF+ LG+E ++ I N PEWFY D GA Y T+S
Sbjct: 36 ISWKQFSGTVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRFLFVGEQYQYDAAFSIFGFCSSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M G P +++++ E + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMATGEGLPHNDTVEERTERASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ +S FLPL+H+
Sbjct: 209 FHTHDDRLTTMSDKDVSMNFLPLTHV 234
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETTGLKKALMLDAIRVGRIHNLDYLRLGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGIEVKIGEDNE 416
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A ID + ++ ++I++F LP FS+ GEL T+K+KR V K Y I
Sbjct: 537 KIVGLFRARIDTLQ-QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRAVVAKNYSEQI 595
Query: 481 DKFYD 485
+K Y+
Sbjct: 596 EKMYE 600
>gi|46191171|ref|ZP_00120254.2| COG1022: Long-chain acyl-CoA synthetases (AMP-forming)
[Bifidobacterium longum DJO10A]
gi|189439455|ref|YP_001954536.1| long-chain acyl-CoA synthetase [Bifidobacterium longum DJO10A]
gi|322688984|ref|YP_004208718.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
infantis 157F]
gi|189427890|gb|ACD98038.1| Long-chain acyl-CoA synthetase [Bifidobacterium longum DJO10A]
gi|320460320|dbj|BAJ70940.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
infantis 157F]
Length = 677
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDTDMRKKADGAVEECPSLEHIITIETG-------GLDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 292
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 293 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 327
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A KNA V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 605 AAKNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 662
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 663 RYSTLLN 669
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 28/169 (16%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q+YM + N R R ++ S +++ +G R + ++G AP+ EL +F
Sbjct: 380 QNYMKEVSANGKAGALTRTRRAAFDPIVYSSLREVLG-GRAKWIVAGGAPLDPELLAFFR 438
Query: 149 SLDIPICEVFGMSECAGAHTVSA-PDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEY 207
+P+ E +G++E S F VG PG +I + +GEI +K
Sbjct: 439 GAGVPVYEGYGLTETTAPCAFSPLGTPFHAGSVGIAFPGFSLRIAE-----DGEIQVKG- 492
Query: 208 EANVRTVAKAFLKLGLERYH---SVCIIGFNAPEWFYS-DLGAIYAGGF 252
R V RYH + F W+ + DLG I GF
Sbjct: 493 ----RAV--------FPRYHKNDEATELSFTEDGWYVTGDLGRIDNDGF 529
>gi|419850312|ref|ZP_14373314.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 35B]
gi|419852231|ref|ZP_14375125.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 2-2B]
gi|386409656|gb|EIJ24493.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 35B]
gi|386411549|gb|EIJ26269.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 2-2B]
Length = 677
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDTDMRKKADGAVEECPSLEHIITIETG-------GLDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 292
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 293 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 327
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A KNA V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 605 AAKNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 662
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 663 RYSTLLN 669
>gi|197118507|ref|YP_002138934.1| AMP-forming acyl-CoA synthetase [Geobacter bemidjiensis Bem]
gi|197087867|gb|ACH39138.1| acyl-CoA synthetase, AMP-forming [Geobacter bemidjiensis Bem]
Length = 603
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
V++ KL ++ + I+ N W +D+G + GG +Y T +P+ + L + +
Sbjct: 49 VSRGLRKLRMKPGDRIAILSENRAGWIIADMGILCGGGVTVPVYATGTPDQIAYALSSCE 108
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPGVISWDELMELGRAAPDE- 329
A I V Q K+L+V+ P L+ ++ +E G+ P V ++ +L E+ D
Sbjct: 109 ARIVFVSGKVQYRKLLQVRDALPHLEHVISFERFLGEAALP-VTTFYQLSEVDDPILDTE 167
Query: 330 --SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVI 387
+D V++++ T++YTSGT G K +L+H N+ F+ + +
Sbjct: 168 RAEIDSVIDSLTPEMPATIIYTSGTTGTPKGAVLTHGNLVFDVWATLDKVGGVGQEDLFL 227
Query: 388 SFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
SFLPLSH+ ++V Y ++ A + FAD
Sbjct: 228 SFLPLSHVFERSVGYYLPLSCGAAIAFAD 256
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 420 LKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
+++YK+ A++ ++ Q I+KF LP DF++ +GEL PT+KVKR + ++Y+
Sbjct: 538 IELYKSRVEAVN----NELAPFQTIKKFALLPRDFTMDSGELTPTLKVKRQVISERYRDQ 593
Query: 480 IDKFYD 485
ID Y+
Sbjct: 594 IDHLYN 599
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 95 YMAYLEKNVS--EPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDI 152
Y Y++K V + + + L+ SK++ G DR + SG AP+ E+ +F + +
Sbjct: 314 YARYIDKYVPFWLSFQHAIADRLVFSKLRSRFG-DRLKFCASGGAPLDREINEFFWIIGV 372
Query: 153 PICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
P+ E +G++E + ++ + + VG + T+ I G+GE+ +
Sbjct: 373 PVFEGYGLTETSPVLCSNSYNGLRFGSVGTPLAFTEIAIA-----GDGEVLAR 420
>gi|171743041|ref|ZP_02918848.1| hypothetical protein BIFDEN_02166 [Bifidobacterium dentium ATCC
27678]
gi|171278655|gb|EDT46316.1| AMP-binding enzyme [Bifidobacterium dentium ATCC 27678]
Length = 700
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 199 NGEICLK---EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NGE K E A +R AK L GL + V + + +W D + GG A
Sbjct: 137 NGEWITKTGNEVLAEIRETAKGLLHYGLRKGDGVAFMCRTSYQWDIFDAAVMACGGVLAT 196
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS 315
+Y T+S E + + SDA + VVE +K + +CP L+ IV +E
Sbjct: 197 IYDTDSAEQIRNIVNNSDARLLVVETKDMRDKADGAEDECPTLEHIVCFENG-------G 249
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
DE+ G DE LD ++++ + C++VYTSG+ A K V ++H++ A + +
Sbjct: 250 LDEIKAYGSVVSDEELDERIDSVHKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPE 309
Query: 376 YFK--LESAALSVISFLPLSHIAAQTVD 401
Y L ++ +V+ FLP +H A+ ++
Sbjct: 310 YMPDLLRNSRHTVLLFLPQAHSFARAIN 337
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K+Y
Sbjct: 630 NNAAVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIKRYS 688
Query: 478 SIID 481
++++
Sbjct: 689 TLLN 692
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSE----CAGAHTVS 170
++ + +++ +G R + ++G AP+ EL +F ++P+ E +G++E CA + V
Sbjct: 429 MVYASLREVLG-GRAKWIVAGGAPLDPELMAFFRGANVPVYEGYGLTETTAPCA-FNPVG 486
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSV 229
P + VG PG + +I + DE + G Y N +F++ G
Sbjct: 487 VP--YHQGSVGIAFPGFELRIAEDDEIQVRGTAVFPRYHKNEEASEDSFVEDG------- 537
Query: 230 CIIGFNAPEWFYS-DLGAIYAGGF 252
W+ + DLG I GF
Sbjct: 538 ---------WYATGDLGRIDDDGF 552
>gi|383820039|ref|ZP_09975299.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
gi|383335859|gb|EID14280.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
Length = 599
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 197 EGN--GEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
+GN G C K+ +R+ A + G++ V ++ EW DL + G
Sbjct: 40 DGNWVGVTC-KQAAEQIRSAALGLIAKGVQPGDRVALLSATRYEWPILDLAILATGALTV 98
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y TNS E L S+A + +VE D K+ + + P L+ I++ EG D P +
Sbjct: 99 PIYETNSAEQVRFTLANSEAVLIIVETDAHAAKVEPARDELPALREILRIEGS-DTPAL- 156
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
D L+E G++ LD+ L I ++ TL+YTSGT G K V L+H N+
Sbjct: 157 --DALIEAGKSVDPAELDKRLAGIRASDPATLIYTSGTTGQPKGVQLTHSNLVHEIRGDK 214
Query: 375 QYF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWF 414
+ F + + ++ FLPL+H+ A+ + + + T TL F
Sbjct: 215 ECFPAMLAKGEKMLMFLPLAHVLARAITL-AAFTYKVTLGF 254
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ A+G CR ++SG AP+ L ++ + + I E +G++E + A TV+ D
Sbjct: 333 LVYGKLRAALG-GECRAAISGGAPLGARLGHFYRGVGLTIYEGYGLTETSAAITVNRIGD 391
Query: 175 FKLDGVGRTIPGTQTKIVDPDE 196
K+ VG+ +PG +I D DE
Sbjct: 392 LKIGSVGKLVPGNSMRINDDDE 413
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ A+ AN +++S A+ I+KF LP DF+ TGEL PT+KVKR V +K+ + I+ Y
Sbjct: 541 ELAVKEAN-QAVSKAEAIRKFRILPVDFTEDTGELTPTLKVKRKVVAEKFSAEIEAIY 597
>gi|299147218|ref|ZP_07040283.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
gi|298514496|gb|EFI38380.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
Length = 604
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K++ VR A AF+ LG+E ++ I N PEWFY D GA Y T+S
Sbjct: 36 ISWKQFSGTVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRFLFVGEQYQYDAAFSIFGFCSSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M G P +++++ E + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMATGEGLPHNDTVEERTERASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ +S FLPL+H+
Sbjct: 209 FHTHDDRLTTMSDKDVSMNFLPLTHV 234
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETTGLKKALMLDAIRVGRIHNLDYLRLGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGIEVKIGEDNE 416
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ +A ID + ++ ++I++F LP FS+ GEL T+K+KR V K Y I
Sbjct: 537 KIVGLFRARIDTLQ-QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRAVVAKNYSEQI 595
Query: 481 DKFYD 485
+K Y+
Sbjct: 596 EKMYE 600
>gi|374572661|ref|ZP_09645757.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
WSM471]
gi|374420982|gb|EHR00515.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
WSM471]
Length = 612
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E+ + VA A +G II PEW + D+G + AGG ++G+Y T++
Sbjct: 44 REWLEISKEVAYALHAIGFRPGDVASIIANAVPEWVHVDMGILCAGGVSSGIYPTDASSQ 103
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDEL 319
+ + S + ED++QL+KIL +A+CP L+ I+ ++ G D V+S DE
Sbjct: 104 VEYLVNDSRTKVIFAEDEEQLDKILACRARCPSLRKIIVFDMEGLSGFSDD-MVMSLDEF 162
Query: 320 MELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
LGR A + ++++ + ++ LVYTSGT G K M ++ ++T +
Sbjct: 163 RALGRNHMAGREALWQEMVDSRSASDLAVLVYTSGTTGPPKGAMHANRSVTHQMRHANDF 222
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+I FLPL H+A + Y + + + + FA+
Sbjct: 223 IPAREDEDRLI-FLPLCHVAERIGGYYISVALGSVMNFAE 261
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 67 WKK----VTYKLQ-TTGVKRWIANYAKSTSLQHYMA-YLEKNVSEPYTYRLVRW----LI 116
W+K +T L+ T ++RW+ Y ++ + + M Y + P + R+ L
Sbjct: 285 WEKFYSAITIALKDATPLQRWV--YRRAIDVGYRMVDYRIEGKPPPLSLRIANGIAYRLA 342
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
+++ +GLDRC ++ +GAAPI+ EL R+FL+L I I EV+G +E G T+ + K
Sbjct: 343 FRNIRRMIGLDRCLIAFTGAAPIAPELIRWFLALGIDIHEVYGQTENCGVATMMPTERIK 402
Query: 177 LDGVGRTI 184
L VG+ +
Sbjct: 403 LGSVGKAV 410
>gi|432336002|ref|ZP_19587543.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
gi|430777070|gb|ELB92452.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
Length = 595
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 160 MSECAGAHTVSAPDDFKL-DGVGRTIPGTQTKIVDPDEEGNG---EICLKEYEANVRTVA 215
M E + + S P+D + D V R K V GNG ++ E+ V VA
Sbjct: 1 MREFSVPQSFSIPEDASMADTVFRHAE-EDPKFVPFKRPGNGGWVDVTAAEFAEQVSAVA 59
Query: 216 KAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDAN 275
K + G+E V I+ EW D AGG +Y T++P+ L S +
Sbjct: 60 KGLIASGVELGDRVAILSATRYEWVVIDYAIWTAGGCTVAIYETSAPDQAKWILEDSGTS 119
Query: 276 ICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVL 335
+ VVE+ KQ + + V P L+ ++Q EG G I DEL + G DE L
Sbjct: 120 LLVVENAKQADALKVVTDAAPDLREVLQIEG-----GAI--DELSKRGEGVTDEQLHERR 172
Query: 336 ETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI-IQYFKLESAALSVISFLPLSH 394
+ + TL+YTSGT G K V L+H N +A + + A + FLPL+H
Sbjct: 173 HQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAESAAVKLALSDAMYAGRRTLMFLPLAH 232
Query: 395 IAAQTV 400
+ A+ +
Sbjct: 233 VFARAI 238
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G C ++SG A + L +F + +P+ E +G++E + A +V+
Sbjct: 330 LVYSKLRTALG-GECDRAVSGGAALGARLGHFFRGIGVPVYEGYGLTETSAAISVNTTRA 388
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
K+ VG+ I G KI + +GE+ L
Sbjct: 389 QKVGTVGKPIDGHAAKIGE-----DGELLL 413
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ N K +SN ++I+K+ L DF+ TGEL PT+K+KR + K++ + I+ Y
Sbjct: 540 AVAEGNTK-VSNPERIKKYRILEVDFTQETGELTPTLKLKRNVIHKEHGAAIEAIY 594
>gi|384100041|ref|ZP_10001108.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383842419|gb|EID81686.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 578
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 198 GNG---EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
GNG ++ E+ V VAK + G+E V I+ EW D AGG
Sbjct: 22 GNGGWVDVTAAEFAEQVSAVAKGLIASGVELGDRVAILSATRYEWVVIDYAIWTAGGCTV 81
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T++P+ L S ++ VVE+ KQ + + V P LK ++Q EG G I
Sbjct: 82 AIYETSAPDQAKWILEDSGTSLLVVENAKQADALKVVTDAAPDLKEVLQIEG-----GAI 136
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI- 373
DEL + G DE L + + TL+YTSGT G K V L+H N +A +
Sbjct: 137 --DELSKRGEGVTDEQLHERRHQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAESAAVK 194
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTV 400
+ A + FLPL+H+ A+ +
Sbjct: 195 LALDDAMYAGRRTLMFLPLAHVFARAI 221
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G C ++SG A + L +F + +P+ E +G++E + A +V+
Sbjct: 313 LVYSKLRTALG-GECDRAVSGGAALGARLGHFFRGIGVPVYEGYGLTETSAAISVNTTRA 371
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG+ I G KI + +GE+ LK
Sbjct: 372 QKVGTVGKPIDGHAAKIGE-----DGELLLK 397
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +SN ++I+K+ L DF+ TGEL PT+K+KR + K++ + I+ Y
Sbjct: 529 KKVSNPERIKKYRILEVDFTQETGELTPTLKLKRNVIHKEHGAAIEAIY 577
>gi|398808089|ref|ZP_10566958.1| AMP-forming long-chain acyl-CoA synthetase [Variovorax sp. CF313]
gi|398088411|gb|EJL78975.1| AMP-forming long-chain acyl-CoA synthetase [Variovorax sp. CF313]
Length = 618
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A +G I+ EW +DL + GG + G+Y T++ +
Sbjct: 60 VREIAAGLQSIGFAPGECASILSNTVIEWVLADLAVLSCGGVSNGIYPTDAASQVHYLCE 119
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGR-- 324
S + VEDD+QL+K L+V+A P+L+ +V ++ + D V+S D L LGR
Sbjct: 120 DSGTTVLFVEDDEQLDKALEVRAGLPRLRCLVVFDMEGLRDLDDAAVMSLDALRALGRQH 179
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
A ++++R + + LVYTSGT G K M SH + + A +
Sbjct: 180 LATDPQAVERTVAACRPEDLAILVYTSGTTGKPKGAMHSHAGLVYTARG-YNTLVAQDQT 238
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ FLPL HIA + Y M A L F +
Sbjct: 239 DERMCFLPLCHIAERMGGEYFAMYTGAILNFVEN 272
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 103 VSEP--YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGM 160
VS P + +RL R L L ++ +G+ R R ++GAAPIS EL +++L+L +P+ EV+GM
Sbjct: 337 VSSPLKFRFRLARMLALDNARKLIGIHRARFLVTGAAPISPELVKWYLALGVPMLEVWGM 396
Query: 161 SECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+E GA T K +G + ++ DP GEI ++
Sbjct: 397 TESCGASTAVPATRIKPGSIGPATGYNEVRL-DP---ATGEILVR 437
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V Q IDR N + + ++I+KF L S EL PTMK+KR V KY I
Sbjct: 555 EVQDLIQGEIDRVNAR-FARVEQIKKFFLLETQLSAEDEELTPTMKLKRKLVQTKYAGRI 613
Query: 481 DKFY 484
D Y
Sbjct: 614 DAMY 617
>gi|384197041|ref|YP_005582785.1| AMP-binding protein [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333110815|gb|AEF27831.1| AMP-binding enzyme [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 677
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A VR VAK L G+++ V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLAEVRAVAKGLLHYGIKKGDGVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D EK +CP L+ I+ E + DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDSAMREKAEGAVEECPSLERILCIETG-------ALDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD+ ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGAGISDEELDKRIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPDYMPELL 292
Query: 380 ESAALSVISFLPLSHIAAQTVD 401
+ +++ FLP +H A+ ++
Sbjct: 293 HNKKNTILLFLPQAHSFARAIN 314
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A +NA V Q ID+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 605 ASQNA-AVRAEVQKWIDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 662
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 663 RYSTLLN 669
>gi|283455947|ref|YP_003360511.1| long-chain-fatty acid CoA ligase [Bifidobacterium dentium Bd1]
gi|283102581|gb|ADB09687.1| Long-chain-fatty acid CoA ligase [Bifidobacterium dentium Bd1]
Length = 678
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
Query: 199 NGEICLK---EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NGE K E A +R AK L GL + V + + +W D + GG A
Sbjct: 115 NGEWITKTGNEVLAEIRETAKGLLHYGLRKGDGVAFMCRTSYQWDIFDAAVMACGGVLAT 174
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS 315
+Y T+S E + + SDA + VVE +K + +CP L+ IV +E
Sbjct: 175 IYDTDSAEQIRNIVNNSDARLLVVETKDMRDKADGAEDECPTLEHIVCFENG-------G 227
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
DE+ G DE LD ++++ + C++VYTSG+ A K V ++H++ A + +
Sbjct: 228 LDEIKAYGSVVSDEELDERIDSVHKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPE 287
Query: 376 YFK--LESAALSVISFLPLSHIAAQTVDIYSVMT 407
Y L ++ +V+ FLP +H A+ ++ V +
Sbjct: 288 YMPDLLRNSRHTVLLFLPQAHSFARAINYICVAS 321
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K+Y
Sbjct: 608 NNAAVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIKRYS 666
Query: 478 SIID 481
++++
Sbjct: 667 TLLN 670
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSE----CAGAHTVS 170
++ + +++ +G R + ++G AP+ EL +F ++P+ E +G++E CA + V
Sbjct: 407 MVYASLREVLG-GRAKWIVAGGAPLDPELMAFFRGANVPVYEGYGLTETTAPCA-FNPVG 464
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSV 229
P + VG PG + +I + DE + G Y N +F++ G
Sbjct: 465 VP--YHQGSVGIAFPGFELRIAEDDEIQVRGTAVFPRYHKNEEASEDSFVEDG------- 515
Query: 230 CIIGFNAPEWFYS-DLGAIYAGGF 252
W+ + DLG I GF
Sbjct: 516 ---------WYATGDLGRIDDDGF 530
>gi|384199644|ref|YP_005585387.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|320458596|dbj|BAJ69217.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 703
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 146 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 205
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 206 AEQIRNIVNNSDARLLIVQDTDMRKKADGSVEECPSLEHIITIETG-------GLDEIKA 258
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 259 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 318
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 319 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 353
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A +NA V Q +DRAN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 631 AARNA-AVRAEVQQWVDRAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 688
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 689 RYSTLLN 695
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 45/253 (17%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q+YM + N R R ++ S +++ +G R + ++G AP+ EL +F
Sbjct: 406 QNYMKEVSANGKAGALTRTRRAAFDPIVYSSLREVLG-GRAKWIVAGGAPLDPELLAFFR 464
Query: 149 SLDIPICEVFGMSECAGA---HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+P+ E +G++E + + P F VG PG +I + +GEI +K
Sbjct: 465 GAGVPVYEGYGLTETTAPCAFNPLGTP--FHAGSVGIAFPGFSLRIAE-----DGEIQVK 517
Query: 206 EYEANVRTVAKAFLKLGLERYH---SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNS 261
R V RYH + F W+ + DLG I GF +Y T
Sbjct: 518 G-----RAV--------FPRYHKNDEATELSFTEDGWYATGDLGRIDNDGF---LYITGR 561
Query: 262 PEACLHCLVTSDANIC------VVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS 315
+ + + N+ V++ + + + L + + P + A+V + K +P + +
Sbjct: 562 KKDLI--ITAGGKNVSPGPIEEVIQRCEIVSQALVLGDKRPFISALVTLDEKSLRPWLAA 619
Query: 316 --WDELMELGRAA 326
DE M L AA
Sbjct: 620 KGLDENMSLEDAA 632
>gi|448570160|ref|ZP_21639154.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
gi|445723461|gb|ELZ75103.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
Length = 666
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD + G + E VR +A F LG+E V ++ EW +D + AGG
Sbjct: 58 PDGDYAG-LTYDEMRGIVRRLAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLGAGGVV 116
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDK 310
+YT++S + L A+ VVE++ LE++L V+ + L+ IV +Y+G D+
Sbjct: 117 TTVYTSSSERQTQYLLSDPGADAVVVENEALLERVLAVEDEL-DLRFIVVVDEYDGHDDR 175
Query: 311 PGVISWDELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
V++ EL G A DE + + L+ ++ +L+YTSGT G K V L+H N N
Sbjct: 176 EDVLTLGELYRCGEEAYDEAAYESWLDERDPDDLASLIYTSGTTGQPKGVRLTHWNFRSN 235
Query: 370 AACIIQYF-----KLESAALS----VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ F K ++ + +SFLPL+H+ + + + AT+ +A+
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPGAVALSFLPLAHVFERMAGHFMMFAAGATVAYAE 291
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ +A +D AN +S + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEAEVDAAN-ESFESYERIKQFRVVPEEFSEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
YD
Sbjct: 645 SLIYD 649
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ +V+ A+G + +SG +S EL + ++ +PI E +G++E + +
Sbjct: 360 HRLADRLVFGQVRDALGGN-LDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVVS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P+ K+ +G + +TK+
Sbjct: 419 VNPPEAPKISTIGYPLRNVETKL 441
>gi|108800248|ref|YP_640445.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119869376|ref|YP_939328.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
gi|108770667|gb|ABG09389.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119695465|gb|ABL92538.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 597
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 8/214 (3%)
Query: 190 KIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
++VD D ++ + A +R+VA + G++ V ++ EW D +
Sbjct: 37 RLVDGDWT---DVTCGQAAAQIRSVALGLIASGVQPGDRVALLSATRYEWPIIDFAILAV 93
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD 309
G +Y T+S E L S A + +VE+D +++ +++A P+L+ +++ EG
Sbjct: 94 GALTVPIYETSSAEQVRWVLSDSGAVLAIVENDAHADRVEQLRADLPELRTVLRIEGS-- 151
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
G + D L E GR LD L I + E T++YTSGT G K L+H N+ F
Sbjct: 152 --GTGAIDALAEAGRDVAPAELDDRLAGIRSAEPATMIYTSGTTGRPKGCQLTHANLVFE 209
Query: 370 AACIIQYFKLE-SAALSVISFLPLSHIAAQTVDI 402
F+ + + ++ FLPL+H+ A+ + I
Sbjct: 210 IRGAKSCFRTQLTKGERMLVFLPLAHVLARAITI 243
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 20/175 (11%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K I + A +T++++ A + + + L+ K++ A+G CR ++SG AP+
Sbjct: 296 KGRIFDIAAATAIEYSQAEGGPGLLLRAKHAVFDRLVYGKLRAALG-GECRAAISGGAPL 354
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EG 198
L ++ + + I E +G++E + A TV+ DD K+ VG+ +PG ++ D DE
Sbjct: 355 GARLGHFYRGVGLTIYEGYGLTETSAAITVNRVDDIKIGSVGKLLPGNSMRLGDDDELLV 414
Query: 199 NGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+G + Y N AKAF WF++ DLGAI GF
Sbjct: 415 SGGVVFGGYWRNEEETAKAFTD-----------------GWFHTGDLGAIDDDGF 452
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN +++S A+ I+KF LP DF+ TGEL PT+KVKR V +K+ I+ Y
Sbjct: 541 AVKEAN-QAVSKAEAIRKFRILPVDFTEDTGELTPTLKVKRAVVAEKFADHIEALY 595
>gi|292656046|ref|YP_003535943.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|448290037|ref|ZP_21481193.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|291372084|gb|ADE04311.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|445580429|gb|ELY34808.1| acyl-CoA synthetase [Haloferax volcanii DS2]
Length = 666
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 15/236 (6%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD + G + E VR +A F LG+E V ++ EW +D + AGG
Sbjct: 58 PDGDYAG-LTYDEMRGIVRRLAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLAAGGVV 116
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDK 310
+YT++S + L A+ VVE++ LE++L V+ + L+ IV +Y+G D+
Sbjct: 117 TTVYTSSSERQTQYLLSDPGADAVVVENEALLERVLAVEDEL-DLRFIVVVDEYDGHDDR 175
Query: 311 PGVISWDELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
V++ EL G A DE + + L+ + +L+YTSGT G K V L+H N N
Sbjct: 176 EDVLTLGELYRRGEEAYDEAAYESWLDERDPEDLASLIYTSGTTGQPKGVRLTHWNFRSN 235
Query: 370 AACIIQYF-----KLESAALS----VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ F K ++ + +SFLPL+H+ + + + AT+ +A+
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDAVTLSFLPLAHVFERMAGHFMMFAAGATVAYAE 291
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ + +D AN ++ + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIETEVDAAN-ENFESYERIKQFRVVPEEFSEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
YD
Sbjct: 645 SLIYD 649
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ +V+ A+G + +SG +S EL + ++ +PI E +G++E + +
Sbjct: 360 HRLADRLVFGQVRDALGGN-LDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P+ K+ +G + +TK+
Sbjct: 419 VNPPEAPKIGTIGYPLRNVETKL 441
>gi|116330937|ref|YP_800655.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116124626|gb|ABJ75897.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 681
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE ++ +A+A ++LG+++ V + N EW +D G I G T + +
Sbjct: 40 YEQGIQ-LAEALIELGVQQKQRVGLFADNRIEWIIADYGVILTGAADVPRGTDITDSEIV 98
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG--- 323
+ L S+ + +E+DK LEK + K+Q +K ++ + PGV+ +L+E G
Sbjct: 99 YILNHSEVEVVFIENDKMLEKFNRNKSQLTNVKTLIMMDSTSTSPGVLKMQDLIEKGKKL 158
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
R + + I + + TL+YTSGT G K VML H N+ + + S A
Sbjct: 159 RTDGSRKAEERVSAIDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEA 218
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
++S LP+ H+ + V+ + AAT +
Sbjct: 219 -RLLSILPVWHVFERVVEYVCIGLGAATYY 247
>gi|407645391|ref|YP_006809150.1| acyl-CoA synthetase [Nocardia brasiliensis ATCC 700358]
gi|407308275|gb|AFU02176.1| acyl-CoA synthetase [Nocardia brasiliensis ATCC 700358]
Length = 610
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
RT+ GTQ EI +EY VRT+A +LG+ R +V I+ N PE+
Sbjct: 37 RTVGGTQ------------EITWREYGRRVRTIAAGLARLGVTRGDTVGIMLTNRPEFNL 84
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D A++ G +Y T+SPE H L T+ AN VV + L+ KV A +L I
Sbjct: 85 VDTAALHLGATPFSIYNTSSPEQITH-LFTNAANKVVVTERVFLD---KVTAAGVELAHI 140
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ +G G I+ DE+ G A D + + ++ TL+YTSGT G SK V +
Sbjct: 141 IVVDGP--ATGTITLDEVE--GNPAADFDFEATWRAVQPDDLATLIYTSGTTGPSKGVEV 196
Query: 362 SHDNITFNAACIIQYFKLESAALSV------ISFLPLSHIA 396
+H N+ + Q L + L V +S+LP +H+A
Sbjct: 197 THRNV------LAQVIGLVAGPLPVGLDDRAVSYLPAAHVA 231
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Query: 67 WKKVTYKLQT------TGVKRWIANYAKSTSLQHYMAYLEKNVSEPY---TYRLVRWLIL 117
W+K+ ++T + VK+ +A +A T + A L P +RL L+L
Sbjct: 275 WQKIKAGIETKLAAETSQVKKTLALWAIDTGIAAARADLAGKSRGPVLAVQHRLAETLVL 334
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
+K++ AMGLD ++ SGAAPI E YFL L + EV+GMSE G T + D +
Sbjct: 335 AKLRHAMGLDALNIAASGAAPIPPETLEYFLGLGFTVSEVWGMSETTGVGTFTELDKPRP 394
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
VGR + G + ++ + +GEI ++
Sbjct: 395 GSVGRPLDGIELRL-----DTDGEILVR 417
>gi|406888952|gb|EKD35271.1| hypothetical protein ACD_75C01967G0001, partial [uncultured
bacterium]
Length = 545
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 126/281 (44%), Gaps = 37/281 (13%)
Query: 180 VGRTIPGTQTKIVDPDEEGNGEICLKEYEA-----NVRT-------VAKAFLKLGLERYH 227
VGRT G K+VD + G+ EY A N R VAK F+ LG++R
Sbjct: 8 VGRTTIG---KLVDILADTLGDRIGLEYHALDIRKNFRQLRDTFDEVAKGFMALGIDRGE 64
Query: 228 SVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVV-----EDD 282
V I N PEW Y+ G+ G + T + L+ SDA+ ++ E D
Sbjct: 65 KVAIWANNLPEWVYTQYGSARMGAVLVTVNTNYRASELEYLLLQSDASTLILTGGVREAD 124
Query: 283 KQLEKILKV----------KAQC---PKLKAIVQYEGKPDKPGVISWDELMELGRAAPDE 329
+ L+ + KV + +C P LK IV Y G+ PG+ +W E++ LG +E
Sbjct: 125 EYLKVLSKVCPEIADSKPGQLKCDRLPFLKNIV-YLGEKKIPGMYTWREVLHLGAKVSNE 183
Query: 330 SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL---ESAALSV 386
L L + ++ + YTSGT G K VMLSH N+ NA + + KL ++ + V
Sbjct: 184 ELAERLNALDPDDVINMQYTSGTTGFPKGVMLSHTNLIGNALSMAECMKLTPEDAMCIPV 243
Query: 387 ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQ 427
F + + S T+A + F N LK +A++
Sbjct: 244 PFFHCFGCVIGTLCCMVSGTTMAPVISFTAANVLKTVQASR 284
>gi|296454045|ref|YP_003661188.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
longum JDM301]
gi|296183476|gb|ADH00358.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
longum JDM301]
Length = 677
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDTDMRKKADGSVEECPSLEHIITIETG-------GLDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 292
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 293 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 327
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A KNA V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 605 AAKNA-AVRAEVQQWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 662
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 663 RYSTLLN 669
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 32/171 (18%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q+YM + N R R ++ S +++ +G R + ++G AP+ EL +F
Sbjct: 380 QNYMKEVSANGKAGALTRTRRAAFDPIVYSSLREVLG-GRAKWIVAGGAPLDPELLAFFR 438
Query: 149 SLDIPICEVFGMSECAGA---HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+P+ E +G++E + + P F VG PG +I + +GEI +K
Sbjct: 439 GAGVPVYEGYGLTETTAPCAFNPLGTP--FHAGSVGIAFPGFSLRIAE-----DGEIQVK 491
Query: 206 EYEANVRTVAKAFLKLGLERYH---SVCIIGFNAPEWFYS-DLGAIYAGGF 252
R V RYH + F W+ + DLG I GF
Sbjct: 492 G-----RAV--------FPRYHKNDEATELSFTEDGWYATGDLGRIDNDGF 529
>gi|213692451|ref|YP_002323037.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|213523912|gb|ACJ52659.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 677
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A+VR VAK + GL++ +V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLADVRAVAKGLIHYGLKKGDAVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D +K +CP L+ I+ E DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDTDMRKKADGSVEECPSLEHIITIETG-------GLDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGTTVSDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPAYMPDLL 292
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+++ FLP +H A+ ++ Y V++ ++ A
Sbjct: 293 HDKRNTILLFLPQAHSFARAIN-YIVVSSNVRIYIA 327
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A +NA V Q +DRAN + +S A+ ++KF LP +F+ G + +MKV RP V+K
Sbjct: 605 AARNA-AVRAEVQQWVDRAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIK 662
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 663 RYSTLLN 669
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 45/253 (17%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFL 148
Q+YM + N R R ++ S +++ +G R + ++G AP+ EL +F
Sbjct: 380 QNYMKEVSANGKAGALTRTRRAAFDPIVYSSLREVLG-GRAKWIVAGGAPLDPELLAFFR 438
Query: 149 SLDIPICEVFGMSECAGA---HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+P+ E +G++E + + P F VG PG +I + +GEI +K
Sbjct: 439 GAGVPVYEGYGLTETTAPCAFNPLGTP--FHAGSVGIAFPGFSLRIAE-----DGEIQVK 491
Query: 206 EYEANVRTVAKAFLKLGLERYH---SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNS 261
R V RYH + F W+ + DLG I GF +Y T
Sbjct: 492 G-----RAV--------FPRYHKNDEATELSFTEDGWYATGDLGRIDNDGF---LYITGR 535
Query: 262 PEACLHCLVTSDANIC------VVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS 315
+ + + N+ V++ + + + L + + P + A+V + K +P + +
Sbjct: 536 KKDLI--ITAGGKNVSPGPIEEVIQRCEIVSQALVLGDKRPFISALVTLDEKSLRPWLAA 593
Query: 316 --WDELMELGRAA 326
DE M L AA
Sbjct: 594 KGLDENMSLEDAA 606
>gi|304393630|ref|ZP_07375558.1| AMP-binding enzyme [Ahrensia sp. R2A130]
gi|303294637|gb|EFL89009.1| AMP-binding enzyme [Ahrensia sp. R2A130]
Length = 620
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
++ + +A LG+ ++ + EW +D+ GG +G+YTT+S
Sbjct: 58 DFLERTQAIALGLEALGMVAGDVASVLSEDRKEWIDTDMAVQALGGICSGIYTTDSASQL 117
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE--GKPD--KPGVISWDELME 321
+ + S +E+D+QL+K L +A+ P +V YE G D P V+ D+LME
Sbjct: 118 AYLVNDSGTRFLFIENDEQLDKYLAARAELPDDLLVVVYERDGLTDFSDPKVMFLDQLME 177
Query: 322 LGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LGR+A E R E +A ++ +VYTSGT G K ++H N+ ++ A
Sbjct: 178 LGRSAATEKPQRFEEIVAATKPDDTAIMVYTSGTTGMPKGATITHANLLYSVAAGATAAP 237
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L I FLPL HI + +S + L FA+
Sbjct: 238 LYEGD-EQICFLPLCHILERVFSGFSPIAFRTRLNFAE 274
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 106 PYTYRL----VRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P+ RL +++ +++ +GLDR R SGAAPI+ +L +F ++ + + E +GM+
Sbjct: 341 PFGVRLKELIYEYVVFRNLRRMLGLDRLRRGASGAAPIAPQLLSWFNAIGVNVLEGYGMT 400
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
E +G +++A K+ VGR I G + +I D E
Sbjct: 401 ESSGVISLNATGSNKVGTVGRPIDGAEIRIADDGE 435
>gi|256830052|ref|YP_003158780.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
gi|256579228|gb|ACU90364.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
Length = 631
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 6/190 (3%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
LGL R + IIG N PEW ++ L GG + G+Y + E + S A + V E
Sbjct: 56 LGLGRGDIIVIIGDNRPEWLWAQLAIQGLGGVSLGLYQDSPGEEIGYVFELSKARLVVAE 115
Query: 281 DDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGRAAPDESLDRVLE 336
D +Q++KIL +K P L+ IV ++ K D+ G+ S+DE+ LG+ E + ++
Sbjct: 116 DQEQVDKILSIKDSLPLLEYIVYHDSKGLIGYDRSGLKSFDEIRALGKERAHE-FESWIK 174
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIA 396
++ ++ + TSG+ G K MLSH N+ A + Q + + +SFLPL+ +
Sbjct: 175 GVSPDDTALIATTSGSTGRPKLAMLSHKNLLSMAWNLGQS-DPKRDSDEFVSFLPLAWMG 233
Query: 397 AQTVDIYSVM 406
Q + + S +
Sbjct: 234 EQMMAVSSAL 243
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 74 LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEP---YTYRLVRWLILSKVKQAMGLDRCR 130
++TT KR++ N L++ A L +L W + ++ +G R R
Sbjct: 289 METTRFKRFLFNTFMPIGLKYADAVLRGETPSAGLRMANKLADWGLFRALRDRLGFSRVR 348
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK 190
+ +G AP+ + +F ++ + + +++G +E AG + + VG I GT+ +
Sbjct: 349 SASTGGAPLGPDTFTFFHAMGVNLKQIYGQTEIAGISCIHRDGAVSFESVGEPIAGTEIR 408
Query: 191 IVDPDE 196
I + E
Sbjct: 409 ISEDGE 414
>gi|389847450|ref|YP_006349689.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|448617228|ref|ZP_21665883.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|388244756|gb|AFK19702.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|445748577|gb|EMA00024.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
Length = 667
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A F LG+E V I EW +D + AGG +YT++S + L
Sbjct: 74 VRNLAAGFRDLGMETGDRVGIFAHTRMEWAQTDFAVLGAGGVVTTVYTSSSERQVRYLLS 133
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDELMELGRAAP 327
AN VVE+ + LE++L V+ L+ IV +YEG D+ +++ E+ G
Sbjct: 134 DPGANAVVVENQELLERVLAVEDDL-DLRFIVVIDEYEGYDDRDDILTLGEVHRHGEEVF 192
Query: 328 DES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-----KLES 381
DE+ + L+ ++ +L+YTSGT G K L+H N N + F K ++
Sbjct: 193 DEAEYESWLDARDPDDLASLIYTSGTTGQPKGAQLTHWNFRSNVNESYRRFGPRPNKSDA 252
Query: 382 AALS----VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
A+S +SFLPL+H+ + + + AT+ +A+
Sbjct: 253 PAVSPDSVSLSFLPLAHVLERMAGHFMMFAAGATVAYAE 291
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ + +++AN ++ + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEEEVEKAN-ENFESYERIKQFRIVPEEFSEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
D YD
Sbjct: 645 DLIYD 649
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+R+ L+ +V++A+G + +SG +S EL + ++ +PI E +G++E + T
Sbjct: 360 HRVADRLVFDQVREALGGN-IEFFISGGGSLSAELCALYHAMGLPIFEGYGLTETSPVIT 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P+ K+ +G + + K+
Sbjct: 419 VNPPEAPKIGTIGYPLREVEIKL 441
>gi|339479140|gb|ABE95605.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium breve UCC2003]
Length = 677
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A VR VAK L G+++ V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLAEVRAVAKGLLHYGIKKGDGVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA++ +V+D EK +CP L+ I+ E + DE+
Sbjct: 180 AEQIRNIVNNSDAHLLIVQDSAMREKAEGAVEECPSLERILCIETG-------ALDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGAGISDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPDYMPELL 292
Query: 380 ESAALSVISFLPLSHIAAQTVD 401
+ +++ FLP +H A+ ++
Sbjct: 293 HNKKNTILLFLPQAHSFARAIN 314
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 411 TLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRP 470
+L A +NA V Q ID+AN + +S A+ ++KF LP +F+ G + +MKV RP
Sbjct: 601 SLEDASQNA-AVRAEVQKWIDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRP 658
Query: 471 FVVKKYQSIID 481
V+K+Y ++++
Sbjct: 659 KVIKRYSTLLN 669
>gi|269126493|ref|YP_003299863.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
gi|268311451|gb|ACY97825.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
Length = 616
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 8/216 (3%)
Query: 195 DEEGNGEICLKEYEANVRTV--AKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
D EG+G L + RT+ A F+ LGL V ++ N E +D G ++AGG
Sbjct: 41 DREGDGWRTLTWGQVRQRTLEAAAGFVALGLAPGEVVAMMMPNRSEHVLTDFGVVHAGGT 100
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDK 310
+Y T +P+ A V++ QL++ L V + P L+ ++ + P
Sbjct: 101 PTTVYATLAPDQVAFVAGNCSAAYAVLDGRDQLDRWLPVLDKLPALRKVIVLDASVCPSG 160
Query: 311 PGVISWDELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNIT 367
++WD+ ++LGR A+ ++R + + + T++YTSGT G K V+++H
Sbjct: 161 DRFMTWDDFLKLGRERLASDPAEVERRWQAVKPTDTLTVLYTSGTTGNPKGVLITHRMAL 220
Query: 368 FNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
+ AA + +L ++SV S+LP +HIA + + +Y
Sbjct: 221 YEAAVSDEVSELPDHSVSV-SYLPYAHIADRVLSMY 255
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L ++ +GLDR +LS AAP+ E+ R+F L + I +V+GM+E GA T + D F
Sbjct: 350 VLRPMRALLGLDRVVQALSAAAPLPIEVARFFSGLGMRIMDVYGMTETTGAATGNTKDAF 409
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
KL VGR PG + K+ + +GEI ++
Sbjct: 410 KLGTVGRAFPGIEVKLAE-----DGEILIR 434
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 401 DIYSVMTVAATLWFADKNAL----KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSI 456
++ V AA + D AL +V + A+ AN + ++ Q+++K++ LP +++
Sbjct: 528 EVAPVWAAAAGIENTDVAALAEDPRVLAEIEKAVQDANAR-LARVQQVKKWKVLPTEWTA 586
Query: 457 PTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ EL PT+K+KR V KY +I++ Y+
Sbjct: 587 ESEELTPTLKLKRRVVHSKYADVIEELYN 615
>gi|407937399|ref|YP_006853040.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
gi|407895193|gb|AFU44402.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
Length = 618
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A + LG I+ EW +DL + GG A G+Y T++ +
Sbjct: 60 VREIAGGLMSLGFAPGECASILSNTNIEWVLADLAVLSCGGVANGIYPTDAAAQVHYLCE 119
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGRA- 325
S + VEDD+QL+K L+V+ P L+ +V ++ + + P V+S L +LGRA
Sbjct: 120 DSRTTVLFVEDDEQLDKALEVRNNLPLLRKVVVFDMEGLRSLNDPDVLSLAALRDLGRAW 179
Query: 326 ---APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL--E 380
PD + RV + + LVYTSGT G K M +H +T+ + Y L
Sbjct: 180 NTQHPDALMQRV-KACRPEDLAILVYTSGTTGKPKGAMHTHGALTY---TVRGYNTLISR 235
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
S A + FLPL HIA + Y + A L F +
Sbjct: 236 SEADETMCFLPLCHIAERMGGEYFSLYTGARLNFVEN 272
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L R+L L+ V++ +G+ R R ++GAAPIS EL +++L+L +P+ EV+GM+E GA T
Sbjct: 345 FMLARFLALNNVRKLIGIHRARFLVTGAAPISPELVKWYLALGVPMLEVWGMTETCGAST 404
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHS 228
K +G + +I DP GEI ++ V K +L + +
Sbjct: 405 GVPATRIKPGSIGPAASYNEVRI-DPT---TGEILVRG-----PNVFKGYLNQPEKTAET 455
Query: 229 VCIIGFNAPEWFYS-DLGAIYAGGF 252
+ G W ++ D+GAI A G+
Sbjct: 456 IDPDG-----WLHTGDVGAIDADGY 475
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q IDR N K + ++I+KF L + EL PTMK+KR V +KY I
Sbjct: 555 EVQELIQGEIDRVNTK-FARVEQIKKFFLLDTQLTAEDEELTPTMKLKRKLVQQKYAPQI 613
Query: 481 DKFY 484
+ Y
Sbjct: 614 EAMY 617
>gi|336397520|ref|ZP_08578320.1| Long-chain-fatty-acid--CoA ligase [Prevotella multisaccharivorax
DSM 17128]
gi|336067256|gb|EGN55890.1| Long-chain-fatty-acid--CoA ligase [Prevotella multisaccharivorax
DSM 17128]
Length = 611
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 34/264 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ ++ ANV+ V+ AFL LGL+ + + N E+ Y+D GA + Y T
Sbjct: 36 EVSWNQFSANVKKVSNAFLALGLKSQDKIAVFSQNCAEYLYTDFGAYGVRVVSIPFYATT 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK----PDKPGVISW 316
S + + + + + V + +Q +K ++ A CP ++ I+ ++ P + +
Sbjct: 96 SGQQVEYMINDAGVRLVFVGEQEQYDKAHRIHALCPTMERIIVFDRHVRLSMHDPEAMYF 155
Query: 317 DELMELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDN----ITFNAA 371
D+ ++LG P E ++ + ++ C ++YTSGT G SK VML++ I N +
Sbjct: 156 DDFLKLGEGLPHEQEVEARWKEANEDDLCNILYTSGTTGESKGVMLTYGQYDAAIKANDS 215
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNAL----------- 420
C+ VI+FLP +HI + S+ A + D + +
Sbjct: 216 CVPV-----GENDRVINFLPFTHIFERGWAYLSLTEGATLIVNTDPHKIQQSMRETHPTC 270
Query: 421 ---------KVYKATQAAIDRANL 435
KVY+A +A IDR+++
Sbjct: 271 MSSVPRFWEKVYQAVRAKIDRSSV 294
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 395 IAAQTVDIYSVM---TVAATLWFADKNAL----KVYKATQAAIDRANLKSISNAQKIQKF 447
++A V YSV+ T + FAD+ L +V ID + +++ ++I++F
Sbjct: 505 VSALVVPEYSVLEEWTKEKGIQFADRVELCRNQQVIDMMTERIDTLQ-QGLAHYEQIKRF 563
Query: 448 EFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
LP FS+ GE+ T+K+ R V + Y+ IID Y
Sbjct: 564 TLLPHHFSMQEGEMTNTLKLCRGVVNEHYKDIIDAMY 600
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRL----VRWLIL 117
W+KV ++ ++ ++ I N+A + ++ + YL K P RL V +L
Sbjct: 278 WEKVYQAVRAKIDRSSVTQQKIFNHAWNIGKRYNIDYLAKGKRPPLALRLQYAIVNKTVL 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAP---DD 174
S V+ MGLD + + A +S E+ + S+ I I +G++E TVS +
Sbjct: 338 SLVRAQMGLDHPNIFPTAGAYVSPEVAEFVHSIGIGIIVGYGLTESLA--TVSCDHKGEP 395
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
F + VGR I G + KI D N EI LK
Sbjct: 396 FTIGSVGRPIKGIEIKIGD-----NSEILLK 421
>gi|289581849|ref|YP_003480315.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289531402|gb|ADD05753.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 669
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A F LG+E V I EW +D + AG +YT++SP+ + L
Sbjct: 73 VRNLAAGFRDLGIESGDRVGIFSNTRMEWAQTDFALLSAGAVVTTVYTSSSPDQVSYLLD 132
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDELMELGRAAP 327
DA+ VVE+ + LE++L+V+ + L+ IV ++G D+ +++ EL + G A
Sbjct: 133 DPDADGVVVENQELLERVLEVEDEL-DLEFIVSIDNFDGYDDRDDILTLAELHDRGAGAF 191
Query: 328 DESLDRV-LETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-------- 378
DE + ++ A ++ +L+YTSGT G K V L+H N N I + F
Sbjct: 192 DEEAYQTWVDEPAMDDLASLIYTSGTTGKPKGVQLTHGNFRSNVNQIRKRFAPRPDRDDD 251
Query: 379 --LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ + +S+LPL+H+ +T + + A + +A+
Sbjct: 252 VPVIDSESQAMSYLPLAHVFERTAGHFLLFASGACVAYAEN 292
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q +DR N + I++FE +P +F+ L PTMK KR ++ +++ +
Sbjct: 606 RVCEYIQQEVDRVN-DDFEKHETIKQFELVPQEFTEENDMLTPTMKKKRRVIMDRFEDRV 664
Query: 481 DKFYD 485
D+ Y+
Sbjct: 665 DRIYE 669
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + +SG +S EL R + ++ +PI E +G++E + V+ P++
Sbjct: 366 LVFSTVREALG-GEIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVIAVNPPEE 424
Query: 175 FKLDGVG 181
K+ +G
Sbjct: 425 PKIGTIG 431
>gi|306822847|ref|ZP_07456223.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium dentium ATCC
27679]
gi|304553479|gb|EFM41390.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium dentium ATCC
27679]
Length = 700
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 199 NGEICLK---EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NGE K E A +R AK L GL + V + + +W D + GG A
Sbjct: 137 NGEWITKTGNEVLAEIRETAKGLLHYGLRKGDGVAFMCRTSYQWDIFDAAVMACGGVLAT 196
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS 315
+Y T+S E + + SDA + V+E +K + +CP L+ IV +E
Sbjct: 197 IYDTDSAEQIRNIVNNSDARLLVIETKDMRDKADGAEDECPTLEHIVCFENG-------G 249
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
DE+ G DE LD ++++ + C++VYTSG+ A K V ++H++ A + +
Sbjct: 250 LDEIKAYGSVVSDEELDERIDSVHKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPE 309
Query: 376 YFK--LESAALSVISFLPLSHIAAQTVD 401
Y L ++ +V+ FLP +H A+ ++
Sbjct: 310 YMPDLLRNSRHTVLLFLPQAHSFARAIN 337
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K+Y
Sbjct: 630 NNAAVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIKRYS 688
Query: 478 SIID 481
++++
Sbjct: 689 TLLN 692
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSE----CAGAHTVS 170
++ + +++ +G R + ++G AP+ EL +F ++P+ E +G++E CA + V
Sbjct: 429 MVYASLREVLG-GRAKWIVAGGAPLDPELMAFFRGANVPVYEGYGLTETTAPCA-FNPVG 486
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSV 229
P + VG PG + +I + DE + G Y N +F++ G
Sbjct: 487 VP--YHQGSVGIAFPGFELRIAEDDEIQVKGTAVFPRYHKNEEASEDSFVEDG------- 537
Query: 230 CIIGFNAPEWFYS-DLGAIYAGGF 252
W+ + DLG I GF
Sbjct: 538 ---------WYATGDLGRIDDDGF 552
>gi|317051585|ref|YP_004112701.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
gi|316946669|gb|ADU66145.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
Length = 611
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 8/219 (3%)
Query: 215 AKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDA 274
++ K G++ V I N W +D G A +Y TN+ E + + S++
Sbjct: 50 SRGLRKAGIKPGDRVAIFSENRTGWAIADFGVQAARAITVPIYATNTAEQAEYVINHSES 109
Query: 275 NICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPGVISWDELMELGRAAPDESL 331
I V Q EKIL+++ P ++ +V +E G D P V + +L E+ DE
Sbjct: 110 RIVFVSTRLQYEKILQIRQNIPHVERVVSFEQFLGSDDLP-VNTLQQLSEVSHPLTDEER 168
Query: 332 DRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVIS 388
+ E IA + T++YTSGT G K VML+H N+ F+A +Q + +S
Sbjct: 169 VELEEEIAQITPEDLITVIYTSGTTGVPKGVMLTHSNMLFDACAGVQKLGGMAEDEVFLS 228
Query: 389 FLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQ 427
FLPLSH+ +T ++ + A + FA+ N KV + Q
Sbjct: 229 FLPLSHVLERTAGYHAPLMYGAHVAFAE-NVDKVVENIQ 266
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 75 QTTGVKRWIANYAKSTSLQH-YMAYLEKNV--SEPYTYRLVRWLILSKVKQAMGLDRCRV 131
Q V+R + ++A Q+ Y Y+E S Y L + L+ SK+K G R R
Sbjct: 293 QAPAVRRSLFHWAVDVGKQYVYRRYIENQPVGSLGVKYGLAKRLVFSKIKPRFG-GRMRF 351
Query: 132 SLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKI 191
+SG AP+ + + ++ IP+ E +G++E + A T++ D + VG+ + T+ K
Sbjct: 352 FISGGAPLDKTINEFMWAVGIPVFEGYGLTETSPALTLNTIADNRFGSVGQVLDQTEVKT 411
Query: 192 VDPDE 196
+ E
Sbjct: 412 AEDGE 416
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV+K + + N K + + + I+KF LP DFSI GEL PT+K+KR + +KY+ I
Sbjct: 537 KVHKLFEERVRDVNAK-LPSYETIKKFVILPRDFSIEDGELTPTLKLKRKVIAEKYRVSI 595
Query: 481 DKFYD 485
+ +D
Sbjct: 596 EGMFD 600
>gi|215259863|gb|ACJ64423.1| long-chain acyl-CoA synthetases [Culex tarsalis]
Length = 145
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV +A Q IDRAN K+ISNAQKIQKF LP DFS+P GELGPT+KVKR V +KY+ II
Sbjct: 81 KVLQAIQEGIDRANKKAISNAQKIQKFALLPVDFSVPGGELGPTLKVKRNIVQEKYKDII 140
Query: 481 DKFY 484
+KFY
Sbjct: 141 EKFY 144
>gi|419961077|ref|ZP_14477086.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
gi|414573398|gb|EKT84082.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
Length = 578
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 198 GNG---EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
GNG ++ E+ V VAK + G+E V I+ EW D AGG
Sbjct: 22 GNGGWVDVTAAEFAEQVSAVAKGLIASGVELGDRVAILSATRYEWVVIDYAIWTAGGCTV 81
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T++P+ L S ++ VVE+ KQ + + V P L+ ++Q EG G I
Sbjct: 82 AIYETSAPDQAKWILEDSGTSLLVVENAKQADALKVVTDAAPDLREVLQIEG-----GAI 136
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI- 373
DEL + G DE L + + TL+YTSGT G K V L+H N +A +
Sbjct: 137 --DELSKRGEGVTDEQLHERRHQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAESAAVK 194
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTV 400
+ A + FLPL+H+ A+ +
Sbjct: 195 LALSDAMYAGRRTLMFLPLAHVFARAI 221
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G C ++SG A + L +F + +P+ E +G++E + A +V+
Sbjct: 313 LVYSKLRTALG-GECDRAVSGGAALGARLGHFFRGIGVPVYEGYGLTETSAAISVNTTRA 371
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
K+ VG+ I G KI + +GE+ L
Sbjct: 372 QKVGTVGKPIDGHAAKIGE-----DGELLL 396
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ N K +SN ++I+K+ L DF+ TGEL PT+K+KR + K++ + I+ Y
Sbjct: 523 AVAEGNTK-VSNPERIKKYRILEVDFTQETGELTPTLKLKRNVIHKEHGAAIEAIY 577
>gi|336119344|ref|YP_004574121.1| long-chain fatty-acid--CoA ligase [Microlunatus phosphovorus NM-1]
gi|334687133|dbj|BAK36718.1| long-chain fatty-acid--CoA ligase [Microlunatus phosphovorus NM-1]
Length = 605
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Query: 229 VCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKI 288
V I EW +DLG + AGG +Y T E + L S++ + EDD Q+ K+
Sbjct: 73 VAIASGTRMEWILADLGIMCAGGATTTVYPTTQHEDVAYILRDSESKVVFAEDDFQVAKV 132
Query: 289 LKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDE---SLDRVLETIATNECCT 345
+ + +K IVQ+ GK D V+SW E ELGR+ E S+D + + T
Sbjct: 133 VDHLDELSVVK-IVQFSGKADHELVVSWTEFRELGRSHLVEQPGSVDNAIAATRPDTLAT 191
Query: 346 LVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHI 395
L+YTSGT G K V L+ D T+ A + Y + L + +LPLSH+
Sbjct: 192 LIYTSGTTGRPKGVRLTQDAWTYEGAAVEAYDIISPDDLQYL-WLPLSHV 240
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 16/147 (10%)
Query: 67 WKKVTYKLQT---TGVKRWIANYAKSTSLQHYMAYLEKNVSEP-----YTYRLVRWLILS 118
++KV K+ T +GVK I N+A S + L SEP Y L L+ S
Sbjct: 284 FEKVRAKVMTGAQSGVKGKIFNWAFSVGYKTIPGRLAG--SEPAGLLGIQYALADKLVFS 341
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
K+K MG + +SG+A +S E++ +F + + I E +G++E + A V+ P +
Sbjct: 342 KLKARMG-GNIKFFVSGSAALSREVQEWFYAAGLLILEGYGLTETSAATFVNDPRATRFG 400
Query: 179 GVGRTIPGTQTKIVDPDEEGNGEICLK 205
VG +PGT+ KI D +GEI ++
Sbjct: 401 TVGPAVPGTEVKIAD-----DGEILVR 422
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 415 ADKNALKVYKATQAAID----RANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRP 470
AD AL A + I+ +AN K + + I+KFE LP +F++ GE+ P++K++R
Sbjct: 531 ADLTALSASPAVKELINGQVAQANRK-LERWETIKKFEILPQEFTVDGGEVTPSLKIRRK 589
Query: 471 FVVKKYQSIIDKFYD 485
V KKY ++ Y+
Sbjct: 590 AVEKKYGDTLNTLYE 604
>gi|399926764|ref|ZP_10784122.1| long-chain-fatty-acid--CoA ligase [Myroides injenensis M09-0166]
Length = 591
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY +++A L+LG++ V +I N +W D+G + G +Y T + E
Sbjct: 38 EEYVKKANAISRALLRLGIKENDKVAVISSTNQTKWNLFDIGILQIGAQNVPIYPTIAAE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S+A CVV D + K++ V+ + P L I ++ G ++D+L+ LG
Sbjct: 98 DYQYILSHSEAKYCVVSDIEVYNKLMSVRHELPLLIDICSFD---QIEGCKNFDQLLALG 154
Query: 324 RAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL-ES 381
+++ +D + ++I+ + TL+YTSGT G K VMLSH+NI NA
Sbjct: 155 EDESNQNEVDAIKDSISPDHLATLIYTSGTTGKPKGVMLSHNNILSNALGSGDRIPFTRD 214
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
A +SFLP+ H+ + + IY +++A+
Sbjct: 215 AKYKALSFLPICHVFERML-IYLYQFNGVAIYYAE 248
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + + R N K ++I+KFE P ++I + L PT+K++R ++ YQ +
Sbjct: 527 KVIERISEEVARLN-KKFGKWEQIKKFELTPEVWTIDSEHLTPTLKLRRKIILSMYQDLY 585
Query: 481 DKFY 484
+K Y
Sbjct: 586 EKIY 589
>gi|448584787|ref|ZP_21647530.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
gi|445727641|gb|ELZ79251.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
Length = 666
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E VR +A F LG+E V I+ EW +D + AGG +YT++
Sbjct: 64 DLTYEEMRGIVRRLAAGFRDLGIETGDRVGILSHTRMEWAQTDFAVLGAGGVVTTVYTSS 123
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWD 317
S + L AN VVE+++ LE++L V+ + L+ IV +YEG D+ V++
Sbjct: 124 SERQVQYLLSDPGANAVVVENEELLERVLAVEDEL-DLRFIVVVDEYEGHEDRDDVLTLG 182
Query: 318 ELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
EL G DE + + L+ + +L+YTSGT G K V L+H N N +
Sbjct: 183 ELYRRGEEVYDEAAYESWLDEREPEDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRR 242
Query: 377 F-----KLESAALS----VISFLPLSHI 395
F K ++ + +SFLPL+H+
Sbjct: 243 FGPRPDKGDTPVIGPDSVALSFLPLAHV 270
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ +V++A+G D +SG +S EL + ++ +PI E +G++E + +
Sbjct: 360 HRLADRLVFGQVREALG-DNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P++ K+ +G + +TK+
Sbjct: 419 VNPPEEPKIGTIGYPLRNVETKL 441
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ +A ++ AN ++ + ++I++F +P +F+ + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEAEVEAAN-ENFESYERIKQFRVVPEEFTEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
YD
Sbjct: 645 SLIYD 649
>gi|309801284|ref|ZP_07695413.1| AMP-binding enzyme [Bifidobacterium dentium JCVIHMP022]
gi|308222173|gb|EFO78456.1| AMP-binding enzyme [Bifidobacterium dentium JCVIHMP022]
Length = 678
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
Query: 199 NGEICLK---EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NGE K E A +R AK L GL + V + + +W D + GG A
Sbjct: 115 NGEWITKTGNEVLAEIRETAKGLLHYGLRKGDGVAFMCRTSYQWDIFDAAVMACGGVLAT 174
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS 315
+Y T+S E + + SDA + V+E +K + +CP L+ IV +E
Sbjct: 175 IYDTDSAEQIRNIVNNSDARLLVIETKDMRDKADGAEDECPTLEHIVCFENG-------G 227
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
DE+ G DE LD ++++ + C++VYTSG+ A K V ++H++ A + +
Sbjct: 228 LDEIKAYGSVVSDEELDERIDSVHKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPE 287
Query: 376 YFK--LESAALSVISFLPLSHIAAQTVDIYSVMT 407
Y L ++ +V+ FLP +H A+ ++ V +
Sbjct: 288 YMPDLLRNSRHTVLLFLPQAHSFARAINYICVAS 321
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K+Y
Sbjct: 608 NNAAVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIKRYS 666
Query: 478 SIID 481
++++
Sbjct: 667 TLLN 670
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSE----CAGAHTVS 170
++ + +++ +G R + ++G AP+ EL +F ++P+ E +G++E CA + V
Sbjct: 407 MVYASLREVLG-GRAKWIVAGGAPLDPELMAFFRGANVPVYEGYGLTETTAPCA-FNPVG 464
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSV 229
P + VG PG + +I + DE + G Y N +F++ G
Sbjct: 465 VP--YHQGSVGIAFPGFELRIAEDDEIQVKGTAVFPRYHKNEEASEDSFVEDG------- 515
Query: 230 CIIGFNAPEWFYS-DLGAIYAGGF 252
W+ + DLG I GF
Sbjct: 516 ---------WYATGDLGRIDDDGF 530
>gi|407278635|ref|ZP_11107105.1| long-chain-fatty-acid-CoA ligase, FadD11 [Rhodococcus sp. P14]
Length = 612
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 9/221 (4%)
Query: 185 PGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDL 244
PGT+ P ++G + ++ VR +A + LG+E + + EW DL
Sbjct: 35 PGTEA-FRFPKDDGWESVTWQQVGDRVRLLAAGLIALGIEPEDRIALASSTRYEWVIVDL 93
Query: 245 GAIYAGGFAAGMY-TTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ 303
+ AG +Y TT +P+ + S + + V ED Q++K+++ +AQ P ++ +V
Sbjct: 94 AVMCAGAATTTVYPTTKAPDVGF-IVSNSGSRVVVAEDKTQVDKLVEQRAQLPDVQQVVV 152
Query: 304 YEGKPDKPGVISWDELMELGRA----APDESLDRVLETIATNECCTLVYTSGTEGASKPV 359
+G D VI+ +L E GR +P+ DRV E I + TL+YTSGT G K V
Sbjct: 153 IDGPGDGNWVITLADLEERGRQLIAESPNAVEDRVRE-IRPDHLATLIYTSGTTGKPKGV 211
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTV 400
L H T+ AA + L L + +LPLSH+ + +
Sbjct: 212 RLPHSAWTYTAAAVDALGILGPDDLQYL-WLPLSHVFGKVL 251
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPY---TYRLVRWLILSKVKQAMGLDRCRVSLS 134
G K+ I ++A + A E P Y+L L+ +K+++ G R R +S
Sbjct: 306 GAKKKIFDWAVGVGTRVSKAKQEDRNPSPLDRLQYKLADKLVFTKIRERFG-GRLRFFVS 364
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G+AP+ ++ ++F ++ I + E +G+SE + A ++ P ++ VG P T+ KI +
Sbjct: 365 GSAPLDRDVAQWFDAVGIIVLEGYGLSETSAASFLNRPLAYRFGTVGWPFPETEVKIAE- 423
Query: 195 DEEGNGEICLK------EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAI 247
+GEI +K Y A+AF G WF++ D+G +
Sbjct: 424 ----DGEILIKGPGVMSGYHDRPDADAEAFEDDG----------------WFHTGDIGEV 463
Query: 248 YAGGF 252
+ GF
Sbjct: 464 DSDGF 468
>gi|300784352|ref|YP_003764643.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|384147618|ref|YP_005530434.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|399536237|ref|YP_006548899.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|299793866|gb|ADJ44241.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|340525772|gb|AEK40977.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|398317007|gb|AFO75954.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
Length = 598
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 7/213 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ KE+ A V VAK K G+ R V I+ EW D AG +Y T+
Sbjct: 45 DVTAKEFAAEVLAVAKGMAKAGIGRGDRVAIMSKTRYEWTLIDFAIWAAGAVTVPIYDTS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A VE + + +++ + L +I Q EG P V +EL
Sbjct: 105 SPEQVHWILSDSAAKGVFVETNAHAAAVEEIRDRLTDLASIWQIEG--GSPAV---EELS 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
LG D+ L ++ +E T+VYTSGT G K V L+H N+ I+ F +L
Sbjct: 160 ALGAPLSDDELHDRRREVSADELATIVYTSGTTGRPKGVELTHRNLLAEIRADIEAFPQL 219
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
S++ FLPL+H+ A+ + + + +T TL
Sbjct: 220 MEQGNSLLCFLPLAHVLARAIAV-TALTARVTL 251
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+
Sbjct: 332 LVYGKLRAALG-GRCVAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTETSAAANVNTQTA 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
F++ VG+ + GT +I D +GE+ LK
Sbjct: 391 FRVGTVGKPVNGTSVRIAD-----DGEVLLK 416
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QAA+D AN KS+S A+ I+KF L DF+ GE+ P++K+KR V K Y + I+ Y
Sbjct: 540 QAAVDEAN-KSVSKAEAIKKFTVLANDFTEAGGEITPSLKLKRNVVTKNYANDIEGLY 596
>gi|326800700|ref|YP_004318519.1| long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
gi|326551464|gb|ADZ79849.1| Long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
Length = 633
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 18/259 (6%)
Query: 174 DFKLDGVGRTI-----PGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHS 228
D + G+ R + P TQT ++ ++ EI + +++ V+ L +GL++
Sbjct: 7 DMTVAGLLRNVVEHIHPDTQTFLIHHEDNQWKEISYRAALDHIQAVSAYLLSIGLKKGDR 66
Query: 229 VCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKI 288
++ N P++ Y D G G +Y T + L S A +V L KI
Sbjct: 67 AALLLENGPDYVYFDQGLQQIGVVNVSIYPTLPESDTEYILNDSGARTIIVNTPFLLRKI 126
Query: 289 LKVKAQCPKLKAIV----QYEGKPD----KPGVISWDELMELG---RAAPDESLDRVLET 337
LK+ C L I+ YE + + GV+ + +++ G R A ++ + E
Sbjct: 127 LKIANNCEALIRIIPTFDGYEKYTENLTLQAGVVPFAKILHDGALLRTAYEKDIASAREG 186
Query: 338 IATNECCTLVYTSGTEGASKPVMLSHDNITFNA-ACIIQYFKLESAALSVISFLPLSHIA 396
I ++ TL+YTSGT G K VML+H N+T N AC+ Q +++ + +SFLPLSH+
Sbjct: 187 ILMSDISTLIYTSGTTGTPKGVMLTHSNLTNNVRACLDQILEVDQHD-TFLSFLPLSHVF 245
Query: 397 AQTVDIYSVMTVAATLWFA 415
+T + + + A + +A
Sbjct: 246 ERTATYHVCLALGAKIAYA 264
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L L+ +K+K+ G R + +SG + + +F ++ I I E +G++E +
Sbjct: 339 YNLAERLVFNKIKEKTG-GRLKFMISGGGALPQNVGEFFGNIGIKILEGYGLTETSPVVA 397
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI----------------VDPD-EEGNGEICLKEYEANV 211
V+ VGR +PG + I DP+ E GEI ++ +
Sbjct: 398 VTEFHRQVYGTVGRVLPGIEIAIQDIESLKIHTVQSHASFDPNLETEEGEIIIRGH---- 453
Query: 212 RTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+ K + E H + ++ WF++ D+G Y G
Sbjct: 454 -CIMKGYWNKPEETKHVI-----DSDGWFHTGDIGKFYKGNL 489
>gi|448566848|ref|ZP_21637103.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
gi|445713437|gb|ELZ65214.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
Length = 666
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E VR +A F LG+E V I+ EW +D + AGG +YT++
Sbjct: 64 DLTYEEMRGIVRRLAAGFRDLGIETGDRVGILSHTRMEWAQTDFAVLGAGGVVTTVYTSS 123
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWD 317
S + L AN VVE+++ LE++L V+ + L+ IV +YEG D+ V++
Sbjct: 124 SERQVQYLLSDPGANAVVVENEELLERVLAVEDEL-DLRFIVVVDEYEGHDDRDDVLTLG 182
Query: 318 ELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
EL G DE + + L+ + +L+YTSGT G K V L+H N N +
Sbjct: 183 ELYRRGEEVYDEAAYESWLDEREPEDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRR 242
Query: 377 F-----KLESAALS----VISFLPLSHI 395
F K ++ + +SFLPL+H+
Sbjct: 243 FGPRPDKGDTPVIGPDSVALSFLPLAHV 270
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ +V++A+G D +SG +S EL + ++ +PI E +G++E + +
Sbjct: 360 HRLADRLVFGQVREALG-DNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P++ K+ +G + +TK+
Sbjct: 419 VNPPEEPKIGTIGYPLRNVETKL 441
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ +A ++ AN ++ + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEAEVEAAN-ENFESYERIKQFRVVPEEFSEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
YD
Sbjct: 645 SLIYD 649
>gi|407783917|ref|ZP_11131108.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
gi|407199170|gb|EKE69192.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
Length = 602
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 10/219 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E + VR +++A G++ V I+ N PEW +DL + AG + Y TN+
Sbjct: 43 REIDRQVRALSRALRAQGIQPGDRVVIVSENRPEWAIADLAIMAAGAVSVPAYVTNTVAD 102
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDKPGVI---SWDELM 320
++ L A + +K L L + ++ EGK P + I WD+ +
Sbjct: 103 HIYILENCGAKGLICSTEKLLRNALPAAIHSSHCEFVIALEGKGPAQECTIRFQDWDDAL 162
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN---AACIIQYF 377
+ G A PD+ +++V ++ L+YTSGT GA K VMLSH I N A ++ F
Sbjct: 163 KAGAAMPDD-VEQVAGQRRRDDLACLIYTSGTGGAPKGVMLSHRAIFCNLVSAFDLLHEF 221
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +SFLPLSH T ++ +++ A +++A+
Sbjct: 222 GLGDEVF--LSFLPLSHSYEHTCGLFFPISIGAQIYYAE 258
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L+ L+ KV+Q MG R + +SG AP++ E+ +FL+L I +C+ +G +E A + +
Sbjct: 331 LLDLLVRRKVRQRMG-GRLKAFISGGAPLNYEVGMFFLALGIRLCQGYGQTEAAPVVSCN 389
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEE--GNGEICLKEYEANVRTVAKAFL 219
P +++ VG + G + ++ PD E GE+ + Y + KA +
Sbjct: 390 RPRRIRIETVGPPLKGVEVRLA-PDGEILVRGELLMDGYWDDPEATEKALI 439
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A +DR N + +S+ +K+++F F+ L PTMK++R + K+YQ+I+D Y
Sbjct: 539 AIGEVLDRVN-RDLSSLEKVRRFVIATEPFTTDNQMLTPTMKIRRHNIRKEYQAILDALY 597
Query: 485 D 485
+
Sbjct: 598 E 598
>gi|68248553|ref|YP_247665.1| long chain fatty acid CoA ligase [Haemophilus influenzae 86-028NP]
gi|68056752|gb|AAX87005.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
86-028NP]
Length = 607
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 133/309 (43%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y+TN
Sbjct: 42 DISWKNFQEQLNQLSRALLTHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYSTN 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 102 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 161
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+E G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 162 SFIETGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 212
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 213 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 272
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 273 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWTISVGQKHFDLRANNKAIPFLLK 329
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 330 KQFALADKL 338
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 554 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 602
>gi|291456694|ref|ZP_06596084.1| putative CoA ligase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|417943159|ref|ZP_12586414.1| Putative CoA ligase [Bifidobacterium breve CECT 7263]
gi|291381971|gb|EFE89489.1| putative CoA ligase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|376165970|gb|EHS84898.1| Putative CoA ligase [Bifidobacterium breve CECT 7263]
Length = 677
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E+ A VR VAK L G+++ V + + +W +D + GG A +Y T+S
Sbjct: 120 VTANEFLAEVRAVAKGLLHYGIKKGDGVAFMCRTSYDWDLTDAAIMACGGVLATIYDTDS 179
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
E + + SDA + +V+D EK +CP L+ I+ E + DE+
Sbjct: 180 AEQIRNIVNNSDARLLIVQDSAMREKAEGAVEECPSLERILCIETG-------ALDEIKA 232
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--L 379
G DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 233 YGAGISDEELDERIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCQTALNLPDYMPELL 292
Query: 380 ESAALSVISFLPLSHIAAQTVD 401
+ +++ FLP +H A+ ++
Sbjct: 293 HNKKNTILLFLPQAHSFARAIN 314
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 411 TLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRP 470
+L A +NA V Q ID+AN + +S A+ ++KF LP +F+ G + +MKV RP
Sbjct: 601 SLEDASQNA-AVRAEVQKWIDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRP 658
Query: 471 FVVKKYQSIID 481
V+K+Y ++++
Sbjct: 659 KVIKRYSTLLN 669
>gi|452963530|gb|EME68596.1| AMP-dependent synthetase and ligase [Magnetospirillum sp. SO-1]
Length = 608
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 224 ERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDK 283
E+ V ++ N PEW +DLG + AGG + YTTN+ LH L S A + +V
Sbjct: 61 EKGDRVMLVAENRPEWAIADLGIMAAGGISVPAYTTNTVADHLHILENSGARLVIVSTRA 120
Query: 284 QLEKILKVKAQCPKLKAIVQYE--GKPDKPGV--ISWDELMELGRAAPDESLDRVLETIA 339
E++L A+ AI+ E PGV WD ++E+ + ++ +
Sbjct: 121 LAERVLPAAARSDHAPAIIVMEPLSLAQSPGVDIHGWDAVLEM-GGGGGAGIRALVAGLD 179
Query: 340 TNECCTLVYTSGTEGASKPVMLSHDNITFN---AACIIQYFKLESAALSVISFLPLSHIA 396
+ L+YTSGT G K VMLSH I N A +++ LE+ +SFLPLSH
Sbjct: 180 RRDTACLIYTSGTGGVPKGVMLSHGAILCNCMGATDVLRELGLENEVF--LSFLPLSHAY 237
Query: 397 AQTVDIYSVMTVAATLWFAD 416
T ++ +++ A + +A+
Sbjct: 238 EHTAGLHFPISIGAEIRYAE 257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ KV+ G R + +SG AP+ E+ +F++L + I + +G +E A V+ P
Sbjct: 333 LVRDKVRARFG-GRLKAFVSGGAPLPYEVGAFFVALGVRILQGYGQTEAAPVIAVNRPGH 391
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+L+ VG +PG + +I G+GEI ++
Sbjct: 392 NRLETVGPAMPGVELRIA-----GDGEILVR 417
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
++ KA IDR N + +S +KI++F + F + G L PT+K++R + +KY +
Sbjct: 534 ELRKALALVIDRVN-RQLSPVEKIRRFMVAISPFDVDNGMLTPTLKIRRHQIREKYGQAL 592
Query: 481 DKFYD 485
D Y+
Sbjct: 593 DGLYE 597
>gi|86159308|ref|YP_466093.1| AMP-dependent synthetase/ligase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775819|gb|ABC82656.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 633
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
+R VAKA L+ G++ V I NAPEW +D G + A + +Y TN+ +
Sbjct: 64 RIRAVAKALLERGVQEGDRVGIFARNAPEWAIADFGILSAKAVSVPIYATNTTAQAEYVA 123
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS--WDELMELGRAAP 327
+ + V D Q +K+ +A ++ ++ G S +D+ + G A+P
Sbjct: 124 TDAGLKLIFVGDQAQYDKVTSFQAGGAPSPWVIAFDRTTRLSGGRSQHFDDFVRDGAASP 183
Query: 328 -DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSV 386
D L+R LE+ +++ T++YTSGT G K +L+H N + F++ + S
Sbjct: 184 RDAELERRLESATSDDVATIIYTSGTTGDPKGAVLTHANFFHQFRAVDARFQVGAQDRS- 242
Query: 387 ISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
I FLPLSH+ + Y + A + AD
Sbjct: 243 ICFLPLSHVYERLWSYYVFRSGAENDYLAD 272
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+R+ L+LSK++ +G ++ S +G AP+S E++ +F + + IC+ +G++E + T
Sbjct: 345 HRVADALVLSKIRDVVGGEKNFFS-AGGAPLSQEVEEFFFAAGLLICQGYGLTETSPMLT 403
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIV-DPDEEGNGEICLKEYEANVRTVAKAF 218
+AP FK VGR + + +I D + G +K Y A AF
Sbjct: 404 CNAPGAFKFGTVGRPVLDCELRIAKDGEILARGGNVMKGYYRRPAETAAAF 454
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q I+ N + ++ ++I++F +PA+F+ GEL PT+K+KR VV+K++++ID Y
Sbjct: 558 QERIEHVN-RRLAGFEQIKRFTLMPAEFTQDGGELTPTLKIKRRVVVQKHRAVIDAMY 614
>gi|418051078|ref|ZP_12689163.1| Long-chain-fatty-acid--CoA ligase [Mycobacterium rhodesiae JS60]
gi|353184735|gb|EHB50259.1| Long-chain-fatty-acid--CoA ligase [Mycobacterium rhodesiae JS60]
Length = 612
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD +G + ++ V +A + LG+ V + EW D G + AG
Sbjct: 43 PDNDGWTSVTWQQVGDRVELIAAGLVSLGINPEDRVALASGTRYEWVVVDFGILAAGAAT 102
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y + + E + S + I V E+ Q++K++ +++ P ++ +V +G D V
Sbjct: 103 TTVYPSTNAEDTAFIVANSGSRIVVAENQSQVDKLVAHRSEVPAVEKVVIIDGAGDGDWV 162
Query: 314 ISWDELMELGRA----APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
I+ +EL +LG+ P DR+ + I ++ TL+YTSGT G K V L H+ T+
Sbjct: 163 ITLEELEQLGKQLLADTPTAVTDRI-DAIRPDQLATLIYTSGTTGKPKGVRLHHEAWTYT 221
Query: 370 AACIIQYFKLESAALSVISFLPLSH 394
AA + L L+ + +LPL+H
Sbjct: 222 AAALQSLHVLSERDLNYL-WLPLAH 245
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 23/142 (16%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S ++Q G R R +SG+A + ++ ++F ++ + E +G++E + A +++ P+
Sbjct: 346 LVFSTIRQRFG-GRLRFFISGSAALDRDVAQWFDAVGAIVLEGYGLTETSAASSLNRPEA 404
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSV---CI 231
++ VG T+P T KI + +GE+ LK + YH +
Sbjct: 405 YRFGTVGWTLPYTDVKIAE-----DGEVLLKGPGV-------------MSGYHDLPEATA 446
Query: 232 IGFNAPEWFYS-DLGAIYAGGF 252
N WF++ D+G + A G+
Sbjct: 447 EAINGEGWFHTGDIGELDAEGY 468
>gi|448282744|ref|ZP_21474026.1| AMP-dependent synthetase and ligase, partial [Natrialba magadii
ATCC 43099]
gi|445575359|gb|ELY29834.1| AMP-dependent synthetase and ligase, partial [Natrialba magadii
ATCC 43099]
Length = 493
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 21/224 (9%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A F LG+E V I EW +D + AG +YT++SP+ + L
Sbjct: 73 VRNLAAGFRDLGIESGDRVGIFSNTRMEWAQTDFALLSAGAVVTTVYTSSSPDQVSYLLD 132
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDELMELGRAAP 327
DA+ VVE+ + LE++L+V+ + L+ IV ++G D+ +++ EL + G A
Sbjct: 133 DPDADGVVVENQELLERVLEVEDEL-DLEFIVSIDNFDGYDDRDDILTLAELHDRGAGAF 191
Query: 328 DESLDRV-LETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF--------- 377
DE + ++ A ++ +L+YTSGT G K V L+H N N I + F
Sbjct: 192 DEEAYQTWVDEPAMDDLASLIYTSGTTGKPKGVQLTHGNFRSNVNQIRKRFAPRPDRDDD 251
Query: 378 ----KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
ES A+ S+LPL+H+ +T + + A + +A+
Sbjct: 252 VPVIDSESQAM---SYLPLAHVFERTAGHFLLFASGACVAYAEN 292
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + +SG +S EL R + ++ +PI E +G++E + V+ P++
Sbjct: 366 LVFSTVREALG-GEIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVIAVNPPEE 424
Query: 175 FKLDGVG 181
K+ +G
Sbjct: 425 PKIGTIG 431
>gi|88797771|ref|ZP_01113359.1| AMP-dependent synthetase and ligase [Reinekea blandensis MED297]
gi|88779448|gb|EAR10635.1| AMP-dependent synthetase and ligase [Reinekea sp. MED297]
Length = 600
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 212 RTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVT 271
+ +A ++LG +R + II N EW + LG + GG G+Y T+ ++ L +
Sbjct: 45 QAIAAGLIELGGDRGSHIGIIAENCEEWVLAQLGVNFMGGVVCGVYPTSPSNEVVYLLKS 104
Query: 272 SDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGRAAP 327
+D + ED +Q++K+L ++ Q P LK I+ ++ K D +I+ L E G
Sbjct: 105 ADCTMVFCEDQEQVDKVLAIEDQLPLLKHIIVFDPKGLNNYDHDKLITLASLQESGAQRL 164
Query: 328 DESLDRVLE---TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
D V E ++ +V+TSG+ G K M+S+ N+ I + E L
Sbjct: 165 QTERDCVNERHDQQQPDDTALIVFTSGSTGPPKAAMISYRNMWHEMLVIRDAIETEP-GL 223
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+++S+LPL HIA Q + ++M T+ F +
Sbjct: 224 NLLSYLPLCHIAEQAMSTLNLMINRVTINFGE 255
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 102 NVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
+VS+ +Y ++ ++ +GL RCR +++ AAPIS L + I ICE+FGM+
Sbjct: 320 SVSQKLSYAFWNAVVYQHLRAYLGLARCRFAMTAAAPISPSLLSQMRGMGIRICEIFGMT 379
Query: 162 ECAGAHTVSAPDDFKLDG-VGRTIPGTQTKIVDPDE-EGNGEICLKEY----EANVRTVA 215
E GA T+ P +G VG+ G K+ + E G I K Y EA T+
Sbjct: 380 ETTGAATIQ-PWHMNSEGRVGQPCTGVDCKVAEDGELLVKGGIIFKGYYKNEEATAETIE 438
Query: 216 KAFLKLG 222
+L G
Sbjct: 439 DGWLHTG 445
>gi|416893219|ref|ZP_11924505.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
gi|347814247|gb|EGY30897.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
Length = 578
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + + ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 17 DISWAELQQQIDKISLALLANHIDIQDKIGIFAHNMPRWTITDIGTLQVRAVTVPIYATN 76
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I V D +Q ++++++ +CPKL+ IV + + W
Sbjct: 77 TAKQAQFIINNADMKIIFVGDQEQYDQVIEIADECPKLQKIVAMKNTIHLHEHTKACHWQ 136
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
E +++ L + L+ + TL+YTSGT G K VML + N+ Q
Sbjct: 137 EFIDMAGEQYQTELQQRLDGKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 196
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
K++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 197 KVDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 239
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 79 VKRWIANYAKSTSLQHY--------MAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCR 130
+++WI ++A + QH+ + +L K Y L L+L K++ +G R R
Sbjct: 274 LRQWIFHWAMAIGRQHFDILSKGQKIGFLLKQ-----QYALANKLVLGKLRALLG-GRIR 327
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQ 188
+ G A + + +F S+ + I +GM+E TVS DD F + +G +PG +
Sbjct: 328 MMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWDDVNFNANSIGSLMPGAE 385
Query: 189 TKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
KI + +E G + +K Y + A+AF G
Sbjct: 386 VKIGENNEILVRGGMVMKGYYKKPQETAEAFTADGF 421
>gi|375094868|ref|ZP_09741133.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
marina XMU15]
gi|374655601|gb|EHR50434.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
marina XMU15]
Length = 598
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E+ A V VAK + G+ + V ++ EW D AG + +Y T+
Sbjct: 45 DVTAREFAAEVLAVAKGLMTAGIGKGDRVGLMSKTRYEWTLLDFAIWAAGAVSVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A +VE + + +V+ + P+L Q EG DKP V + L
Sbjct: 105 SAEQLHWILSDSGAKAVLVETAEHAATLEEVRGRLPELDNAWQIEG--DKPAVSA---LS 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
LG D+ + ++ + T+VYTSGT G K VML+H N+ I F +L
Sbjct: 160 ALGADLADDQVHERRRSVRAADLATIVYTSGTTGRPKGVMLTHHNLLAEVRADINAFPQL 219
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
A S++ FLPL+HI A+ + + + T ATL
Sbjct: 220 MGAGNSLLLFLPLAHILARAIAL-TAFTSRATL 251
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ +K++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+
Sbjct: 332 LVYTKLRAALG-GRCIAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTETSAAANVNTEGA 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
FK+ VGR + GT +I + E +G++ Y N + A+A
Sbjct: 391 FKVGTVGRPVAGTSVRIAEDGEVLLSGDVVFSGYWNNEQATAEAI--------------- 435
Query: 234 FNAPEWFYS-DLGAIYAGGF 252
WF++ DLG + GF
Sbjct: 436 --EDGWFHTGDLGELDDDGF 453
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QAA+D AN K +S A+ I+KF LP DF+ GE+ P++K+KR V K + I+ Y
Sbjct: 540 QAAVDEAN-KQVSQAESIRKFTILPRDFTEAGGEITPSLKLKRNVVSKNHAGTIESLY 596
>gi|344201432|ref|YP_004786575.1| long-chain-fatty-acid--CoA ligase [Muricauda ruestringensis DSM
13258]
gi|343953354|gb|AEM69153.1| Long-chain-fatty-acid--CoA ligase [Muricauda ruestringensis DSM
13258]
Length = 589
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 7/214 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
++Y V++A L++G++ + +I N EW D+G + G +Y T S E
Sbjct: 38 QQYIDKANAVSRALLRMGVKPNDKIAVISMTNRTEWNIVDIGILQIGAQNVPIYPTISEE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S+A C V + LEK+L + ++ KL+ I ++ + +W E++ELG
Sbjct: 98 DYEYVLNHSEAKYCFVSCGEVLEKVLSISSKIDKLEEIYSFD---ELDNCKNWKEVLELG 154
Query: 324 RAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+++ + ++ + + ++ TL+YTSGT G K VMLSH+NI N E+
Sbjct: 155 TDTSNQNDVGKLKDAVKPDDLATLIYTSGTTGRPKGVMLSHNNIVSNVVDSQVRVPFETG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ HI + + +Y ++FA+
Sbjct: 215 G-TALSFLPVCHIFERMI-LYLYQYCGVEIYFAE 246
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L R LI SK K+ +G V +SG+A + L R F + ++P+ E +G++E + V+
Sbjct: 318 LARKLIFSKWKEGLG-GNLSVMVSGSAALQPRLARIFAAAEMPVMEGYGLTETSPVIAVN 376
Query: 171 APDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ +K+ VG+ I + KI + +GEI K
Sbjct: 377 DQRNKGWKIGTVGKMIDNVEVKIAE-----DGEILCK 408
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV Q +D AN + + +K+++F P +S+ G L PTMK+KR V + Y +
Sbjct: 525 KVIARMQEEVDWAN-QEFAKWEKVKQFRLTPDVWSVEEGHLTPTMKLKRKPVKEMYLDLY 583
Query: 481 DKFYD 485
+ Y+
Sbjct: 584 NDIYE 588
>gi|416052822|ref|ZP_11578457.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991614|gb|EGY33077.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 595
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 34/307 (11%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I V D +Q +++L + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFVGDQEQYDQVLDIADECPKLIKIVAMKSTIHLQEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQSRPQLQQRLDDKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKV--------------- 422
+++ +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QVDDTDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVRAALMEIRPTLMCAVPR 272
Query: 423 -YKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGE-----LGPTMKVKRPFVVKKY 476
Y+ AAI L + NA K++++ F +++I G L K+ F++K+
Sbjct: 273 FYEKIYAAI----LDKVHNAPKLRQWIF---NWAIAVGRKHFDALAKQQKI--GFLLKQQ 323
Query: 477 QSIIDKF 483
++ DK
Sbjct: 324 HALADKL 330
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKN---VSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + +H+ A ++ + L L+L K++ +G R R+ G
Sbjct: 291 LRQWIFNWAIAVGRKHFDALAKQQKIGFLLKQQHALADKLVLGKLRALLG-GRIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFNFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+E G + +K Y + A F G
Sbjct: 408 NNEILVRGGMVMKGYYKKPQETADTFTTDGF 438
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++I++F LP FS E+ PT+K++R ++++Y+ +I+ Y+
Sbjct: 546 KELAGWEQIKRFTLLPQAFSTQLEEITPTLKLRRKVILQRYKELIEAMYN 595
>gi|255079006|ref|XP_002503083.1| predicted protein [Micromonas sp. RCC299]
gi|226518349|gb|ACO64341.1| predicted protein [Micromonas sp. RCC299]
Length = 454
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQ-HYMAYLEKNVSEPYTYRLVRWLILSKV 120
W+K LQ TTG+K+ I+ +AK Q H + + S P+ L + IL+KV
Sbjct: 116 WEKFAEALQAVGKKTTGLKKTISTWAKGQGKQIHAASQYKSKKSHPWMGFLAK-KILTKV 174
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
K A+GLD R+ +SGAAPIS + YF +L+I I EV+GMSE G T F
Sbjct: 175 KAAIGLDCARLCISGAAPISKQTLDYFGTLNIHIVEVYGMSENTGPQTCGMNKKFIAGTC 234
Query: 181 GRTIPGTQTKI--VDPDEEGNGEICLK 205
G IPG + KI D+ GNGE+C +
Sbjct: 235 GPVIPGAEIKIDLAKGDKPGNGEVCFR 261
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 342 ECCTLVYTSGTEGASKPVMLSHDNITF-NAACIIQYFKLESAALSVISFLPLSHIAAQTV 400
C TL+YTSGT G K VM+SHDN+T+ A I + + L V+S+LPLSHIAAQ V
Sbjct: 8 HCSTLIYTSGTTGDPKAVMISHDNVTWVTRANIAHHPDFVNGPLRVVSYLPLSHIAAQIV 67
Query: 401 DIYSVMTVAAT------LWFADKNALK 421
DI+S M A + FA +ALK
Sbjct: 68 DIHSPMAYLADHGLPSEVHFARPDALK 94
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+A I N ++SNAQK+QKF L DFS+P GEL T K+KR VV+KY I+ Y
Sbjct: 397 EAGIAGYNKTAVSNAQKLQKFYILDTDFSVPGGELTATQKLKRNVVVEKYAKEIESMY 454
>gi|386400025|ref|ZP_10084803.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
WSM1253]
gi|385740651|gb|EIG60847.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
WSM1253]
Length = 612
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E+ + +A A +G II PEW + D+G + AGG ++G+Y T++
Sbjct: 44 REWLEISKEIAYALHAIGFRPGDVASIIANAVPEWVHVDMGILCAGGVSSGIYPTDASSQ 103
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDEL 319
+ + S + ED++QL+KIL +A+CP L+ I+ ++ G D V+S DE
Sbjct: 104 VEYLVNDSRTKVIFAEDEEQLDKILACRARCPSLRKIIVFDMEGLSGFFDD-MVMSLDEF 162
Query: 320 MELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
LGR A + ++++ + ++ LVYTSGT G K M ++ ++T +
Sbjct: 163 RALGRNHMAGREALWQEMVDSRSASDLAVLVYTSGTTGPPKGAMHANRSVTHQMRHADDF 222
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+I FLPL H+A + Y + + + + FA+
Sbjct: 223 IPARENEERLI-FLPLCHVAERIGGYYISVALGSVMNFAE 261
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 99 LEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVF 158
L ++ YRL +++ +GLDRCR++ +GAAPI+ EL R++L+L I I EV+
Sbjct: 329 LSLRIANGIAYRLA----FRNIRRMIGLDRCRIAFTGAAPIAPELIRWYLALGIDIHEVY 384
Query: 159 GMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
G +E G T+ + KL VG+ + + + PD GEI ++
Sbjct: 385 GQTENCGVATMMPAERIKLGSVGKAVSWGEVAL-SPD----GEILIR 426
>gi|83815604|ref|YP_445334.1| acyl-CoA synthetase, long-chain-fatty acid:CoA ligase [Salinibacter
ruber DSM 13855]
gi|83756998|gb|ABC45111.1| putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase
[Salinibacter ruber DSM 13855]
Length = 632
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 25/264 (9%)
Query: 181 GRTIPGTQTKIVD----------PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVC 230
GRTIP + D P +EG + L ++ A LGLE+ V
Sbjct: 18 GRTIPDLLYEATDAYDNPQALNQPTDEGWVPMSLDQFRRRAEATALGLRALGLEQGAKVA 77
Query: 231 IIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILK 290
++ + + D+G + G +Y +++ E + + ++A VV + K+L +
Sbjct: 78 LLLESDVHYCVVDMGCLIGGLIDVPLYLSSAAEQMQYVVDHAEAEALVVSNPKRLGQAAA 137
Query: 291 VKAQCPKLKAIV-----QYEGKPDKPGVISWDEL---MELGRAA---PDESLDRVLETIA 339
+ P+++ ++ + +PD P ++ L LGRA P ++D + I
Sbjct: 138 LLPDLPRIETVIVCDPGDEDARPDLPDRVTLKTLEAVQALGRAEVEDPSAAVDDLRAEID 197
Query: 340 TNECCTLVYTSGTEGASKPVMLSHDNITFNAACI---IQYFKLESAALSVISFLPLSHIA 396
+ T++YTSGT G K VMLSH+NI+ NA I F+ VISFLPL+H+
Sbjct: 198 PQDLATIIYTSGTTGRPKGVMLSHENISSNAITSIAEIDDFETGPEGEVVISFLPLTHVF 257
Query: 397 AQTVDIYSVMTVAATLWFADKNAL 420
A+ + Y+ M +++FA + L
Sbjct: 258 ARMLQ-YAYMMRGISIYFAHPDDL 280
>gi|163795235|ref|ZP_02189203.1| AMP-dependent synthetase and ligase [alpha proteobacterium BAL199]
gi|159179633|gb|EDP64162.1| AMP-dependent synthetase and ligase [alpha proteobacterium BAL199]
Length = 597
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E + VR +AK ++LG++ V I+ N PEW +DL A+ G Y TN+ +
Sbjct: 41 EVDGIVRRLAKGLIELGIKPGDRVVIVSENRPEWVIADLAAMAIGAVTVPAYVTNTVDDH 100
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP-----GVISWDELM 320
L+ L S A +V K +++ ++ E P P + WD ++
Sbjct: 101 LYILDHSGAVAAIVSSGKLARQVIPAARSSEVCNTVITME-PPSDPHAAELDLYGWDAVL 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
E+G + ++ + I ++ +YTSGT G K VMLSH +I N C + LE
Sbjct: 160 EMGDRT-EHDVEALARGIGRDDTACFIYTSGTGGRPKGVMLSHRSILAN--CDGAHALLE 216
Query: 381 SAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ L +S LPLSH T ++ +++ A +++A+
Sbjct: 217 TIGLGDEVFLSLLPLSHSYEHTAGLFFPISIGAQIYYAE 255
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L+ L+ KV G R + +SG A ++ ++ R+FL+L + + + +G +E + + +
Sbjct: 328 LLSVLVRRKVGTRFG-GRLKAFVSGGAALNPDIGRFFLALKVSLLQGYGQTEASPVVSAN 386
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSV 229
P ++ VG + G + KI + E G++ +K Y + T A +
Sbjct: 387 PPGAIQIHTVGPPLRGVEVKIAEDGEILVRGDLLMKGYWRDPETTATTIID--------- 437
Query: 230 CIIGFNAPEWFYS-DLGAIYAGGF 252
W ++ D+G I+ G+
Sbjct: 438 --------GWLHTGDIGVIHPDGY 453
>gi|374586232|ref|ZP_09659324.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875093|gb|EHQ07087.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 637
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 6/216 (2%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
YE + +A A + LG++ + ++ N EW +D G + G T +
Sbjct: 46 YERGI-NLATALIDLGVQARDHIGLLADNRLEWIIADYGVLLTGAADVPRGTDVTDADIT 104
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDKPGVISWDELMELGRA 325
+ L SDA +C VE+ LEKI K ++Q P LK I+ + + P GV+S +L+E G+
Sbjct: 105 YILPHSDAKVCFVENKAVLEKIKKNQSQLPNLKTIIMMDRETPVSGGVLSMYDLIEKGKK 164
Query: 326 APDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
++ R E IA ++ TL+YTSGT GA K VML+H N+ + L +
Sbjct: 165 LREQGDRRAEERIAQVKEDDLFTLIYTSGTTGAPKGVMLTHANMVSQVLNMPSDINL-TP 223
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKN 418
+ ++S LP+ H+ + ++ ++ T + +N
Sbjct: 224 SDRIVSILPVWHVFERVFEMLAISRGVCTYYTNIRN 259
>gi|294507212|ref|YP_003571270.1| long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
gi|294343540|emb|CBH24318.1| Long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
Length = 632
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 25/264 (9%)
Query: 181 GRTIPGTQTKIVD----------PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVC 230
GRTIP + D P +EG + L ++ A LGLE+ V
Sbjct: 18 GRTIPDLLYEATDAYDNPQALNQPTDEGWVPMSLDQFRRRAEATALGLRALGLEQGTKVA 77
Query: 231 IIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILK 290
++ + + D+G + G +Y +++ E + + ++A VV + K+L +
Sbjct: 78 LLLESDVHYCVVDMGCLIGGLIDVPLYLSSAAEQMQYVVDHAEAEALVVSNPKRLGQAAA 137
Query: 291 VKAQCPKLKAIV-----QYEGKPDKPGVISWDEL---MELGRAA---PDESLDRVLETIA 339
+ P+++ ++ + +PD P ++ L LGRA P ++D + I
Sbjct: 138 LLPDLPRIETVIVCDPGDEDARPDLPDRVTLKTLEAVQALGRAEVEDPSAAVDDLRAEID 197
Query: 340 TNECCTLVYTSGTEGASKPVMLSHDNITFNAACI---IQYFKLESAALSVISFLPLSHIA 396
+ T++YTSGT G K VMLSH+NI+ NA I F+ VISFLPL+H+
Sbjct: 198 PQDLATIIYTSGTTGRPKGVMLSHENISSNAITSIAEIDDFETGPEGEVVISFLPLTHVF 257
Query: 397 AQTVDIYSVMTVAATLWFADKNAL 420
A+ + Y+ M +++FA + L
Sbjct: 258 ARMLQ-YAYMMRGISIYFAHPDDL 280
>gi|380693362|ref|ZP_09858221.1| long-chain-fatty-acid--CoA ligase [Bacteroides faecis MAJ27]
Length = 601
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++ VR A AF+ LG+E ++ I N PEWFY D GA G Y T+S
Sbjct: 36 ITWNQFSGTVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRGVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRYLFVGEQYQYDSAFSIFGFCSSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M +G P +E ++ + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMAMGEGLPHNEVVEERTARASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ ++ FLPL+H+
Sbjct: 209 FHTHDERLTTMTDKDVSMNFLPLTHV 234
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + + P Y+ I
Sbjct: 278 WEKVYAGVQEKISETTGLKKALMLDAIKVGRIHNLDYLRQGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGLEVKINEDNE 416
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ ++ ++I++F LP FS+ GEL T+K+KR V + Y+ +I+K Y+
Sbjct: 551 QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRSVVAENYKELIEKMYE 600
>gi|212716035|ref|ZP_03324163.1| hypothetical protein BIFCAT_00947 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661402|gb|EEB21977.1| hypothetical protein BIFCAT_00947 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 677
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
E A++R +AK + GL++ V + + EW D + GG A +Y T+S E
Sbjct: 124 NEVLADIRQIAKGLMHYGLKKGDGVAFMCRTSYEWDVFDAAVMACGGVLATIYDTDSAEQ 183
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SD+ + VVE K + +CP L+ I+ +E DE+M G
Sbjct: 184 IRNIVNNSDSRLLVVETTDMRTKADGAEKECPTLEHIICFENG-------GLDEIMAYGS 236
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KLESAA 383
DE LD +++I + C++VYTSG+ A K V ++H++ A + Y +L
Sbjct: 237 GVSDEELDARIDSIKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYMPQLLHEK 296
Query: 384 LSVISFLPLSHIAAQTVD 401
+V+ FLP +H A+ ++
Sbjct: 297 KNVLLFLPQAHSFARAIN 314
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+++Y
Sbjct: 607 NNAAVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIQRYA 665
Query: 478 SIID 481
++++
Sbjct: 666 TLLN 669
>gi|120402600|ref|YP_952429.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
gi|119955418|gb|ABM12423.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 617
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 4/204 (1%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD+ + ++ VR +A + LG+ V + EW +D + AG
Sbjct: 48 PDDGSWRSVTWQQVGDRVRLIAAGLIALGVAPEDRVALASSTRYEWVLADFSVLCAGAAT 107
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y T + + S + I + ED Q++K+L+ +++ P L+ IV +G D V
Sbjct: 108 TTLYPTTNARDVAFIVANSGSRIVIAEDQTQVDKLLEHRSELPDLEKIVIIDGDGDGEFV 167
Query: 314 ISWDELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
I+ D+L ELG A + +++ +E I + +++YTSGT G K V L H T+ A
Sbjct: 168 ITLDQLEELGAQLLATSPDIVEQRIEGIRPDHLASIIYTSGTTGRPKGVRLPHRAWTYTA 227
Query: 371 ACIIQYFKLESAALSVISFLPLSH 394
A I L + L+ + +LPL+H
Sbjct: 228 AAIDSLGILRADDLNFL-WLPLAH 250
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 23/142 (16%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LS +++ G R R +S AAP++ ++ R+F ++ I + E +G++E A A ++ P
Sbjct: 351 LVLSTIRERFG-GRLRFFVSAAAPLNRDIARWFDAIGIIVLEGYGLTETAAASFINRPGA 409
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSV---CI 231
++ VG PGT+ KI +GEI L+ V T YH +
Sbjct: 410 YRFGTVGIPFPGTEVKIA-----ADGEILLR--SPGVMTA-----------YHDLPEATA 451
Query: 232 IGFNAPEWFYS-DLGAIYAGGF 252
+A WFY+ D+G I GF
Sbjct: 452 RALDADGWFYTGDIGEIDDDGF 473
>gi|313205896|ref|YP_004045073.1| amp-dependent synthetase and ligase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485217|ref|YP_005394129.1| polyprenyl synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|312445212|gb|ADQ81567.1| AMP-dependent synthetase and ligase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459902|gb|AFD55586.1| polyprenyl synthetase [Riemerella anatipestifer ATCC 11845 = DSM
15868]
Length = 594
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 15/211 (7%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNA-PEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTS 272
+++ LKLG++ + +I N EW DLG G +Y T S E ++ +
Sbjct: 46 ISRGLLKLGIKPGDKISLISTNNRTEWAVMDLGISQIGAVTVPVYPTISVEDYIYIFNNA 105
Query: 273 DANICVVEDDKQLEKILKVKAQCPKLKAIVQY---EGKPDKPGVISWDELMELGR-AAPD 328
+ C V D++ +K+L V+ P L I + EG P+ W E+++LG A
Sbjct: 106 EIKYCFVSDEELYQKLLSVQPSVPSLVGIFTFDKVEGAPN------WAEILDLGEDEATQ 159
Query: 329 ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC---IIQYFKLESAALS 385
++ + + I T++ +++YTSGT G K VML+H NI N I+ K ++ L
Sbjct: 160 IEVEDLKKGIKTDDLASIIYTSGTTGRPKGVMLTHQNIVSNVLTCTPILSEKKPQNTNLK 219
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ HI + + Y + +++FA+
Sbjct: 220 SLSFLPICHIFERML-FYFYINSGISIYFAE 249
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K ++ +G + + +SG+A ++ L R F + I I E +G++E + V+ +
Sbjct: 322 LVFKKWREGLGGNIITL-ISGSAALAPRLNRMFQNAGISILEGYGLTETSPVIAVNTFNK 380
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG +P KI +G+GEI +K
Sbjct: 381 MKVGTVGPVLPNLDVKI-----QGDGEISVK 406
>gi|395221474|ref|ZP_10402957.1| long-chain-fatty-acid--CoA ligase [Pontibacter sp. BAB1700]
gi|394453258|gb|EJF08232.1| long-chain-fatty-acid--CoA ligase [Pontibacter sp. BAB1700]
Length = 585
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
V+ LKLG+ + V II N PEW ++D G G + MY T + E + ++
Sbjct: 46 VSLGLLKLGIGKGDKVAIISLNRPEWVFADFGIQQIGAISVPMYPTITVEDYRYIFNDAE 105
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDR 333
V D + K++ +K I ++ + G W E+++LG L+
Sbjct: 106 VKAVFVSDAELYNKVVAATEGMESIKEIYTFD---EIHGAKHWKEVIKLGEGEDVAQLEP 162
Query: 334 VLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLS 393
+ + ++ T++YTSGT G K VML+++NI N + Y + + +SFLPL
Sbjct: 163 LKAGVGPDDILTIIYTSGTTGNPKGVMLTNNNIISNVTGTLPYVPVNQHHRA-LSFLPLC 221
Query: 394 HIAAQTVDIYSVMTVAATLWFAD 416
HI + + +Y M + ++++A+
Sbjct: 222 HIFERML-LYLYMRIGVSIYYAE 243
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 68 KKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLD 127
K V ++ TGVKR + +A LQ Y +K L LI SK ++A+G +
Sbjct: 273 KIVAKGMELTGVKRKLFFWALELGLQ-YDTREDKGWWYNKQLELANKLIFSKWREALGGN 331
Query: 128 RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS--APDDFKLDGVGRTIP 185
+ +SG A + L R F S +I + E +G++E + V+ P++ + VG I
Sbjct: 332 VIAI-VSGGAALQPRLARVFWSANIRVMEGYGLTETSPVIAVNRYEPENNVIGTVGMAID 390
Query: 186 GTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DL 244
G + KI + +GEI T +K G + + +A WF++ D+
Sbjct: 391 GVEIKIAE-----DGEIL---------TRGPHVMK-GYYKKPDLTAEVIDAENWFHTGDI 435
Query: 245 GAIYAGGF 252
G + G F
Sbjct: 436 GELVEGKF 443
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 430 IDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+D+AN + ++ + I+KF +P +++ +GEL PT+KVKR + YQ ID Y
Sbjct: 532 VDKAN-EGLAQFETIKKFTLIPNMWTVESGELTPTLKVKRKNITANYQKEIDSMY 585
>gi|29348959|ref|NP_812462.1| long-chain-fatty-acid--CoA ligase [Bacteroides thetaiotaomicron
VPI-5482]
gi|298386670|ref|ZP_06996225.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 1_1_14]
gi|383124447|ref|ZP_09945111.1| hypothetical protein BSIG_3525 [Bacteroides sp. 1_1_6]
gi|29340866|gb|AAO78656.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides
thetaiotaomicron VPI-5482]
gi|251839056|gb|EES67140.1| hypothetical protein BSIG_3525 [Bacteroides sp. 1_1_6]
gi|298260344|gb|EFI03213.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 1_1_14]
Length = 601
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++ VR A AF+ LG+E ++ I N PEWFY D GA G Y T+S
Sbjct: 36 ITWNQFSGTVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRGVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRYLFVGEQYQYDSAFSIFGFCSSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M +G P +E ++ + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMAMGEGLPHNEVVEERTARASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ ++ FLPL+H+
Sbjct: 209 FHTHDERLTTMTDKDVSMNFLPLTHV 234
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETTGLKKALMLDAIKVGRIHNLDYLRLGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGLEVKIGEDNE 416
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ ++ ++I++F LP FS+ GEL T+K+KR V + Y+ +I+K Y+
Sbjct: 551 QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRSVVSENYKELIEKMYE 600
>gi|422336959|ref|ZP_16417931.1| long-chain-fatty-acid-CoA ligase [Aggregatibacter aphrophilus
F0387]
gi|353345511|gb|EHB89802.1| long-chain-fatty-acid-CoA ligase [Aggregatibacter aphrophilus
F0387]
Length = 595
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + + ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQIDQISLALLANHIDIQDKIGIFAHNMPRWTITDIGTLQIRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I V D +Q ++++ + +CP L+ IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFVGDQEQYDQVIDIAEECPTLQKIVAMKNTIHLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
E +++ L + L++ + TL+YTSGT G K VML + N+ Q
Sbjct: 154 EFIDMADEQYQVELQQRLDSKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
K++ + +S +SFLPLSHI + Y + AA + D N ++
Sbjct: 214 KVDDSDVS-LSFLPLSHIFERAWVAYVLHRGAANCYIEDTNQVR 256
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPY----TYRLVRWLILSKVKQAMGLDRCRVSLS 134
+++WI ++A + QH+ A L K + Y L L+L K++ +G R R+
Sbjct: 291 LRQWIFHWAMAIGHQHFDA-LAKGQKIGFLLKQQYSLANKLVLGKLRALLG-GRIRMMPC 348
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G A + + +F S+ + I +GM+E TVS DD F + +G +PG + KI
Sbjct: 349 GGAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWDDVNFNANSIGSLMPGAEVKIG 406
Query: 193 DPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ +E G + +K Y + A+AF G
Sbjct: 407 ENNEILVRGGMVMKGYYKKPQETAEAFTADGF 438
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++I++F LP FS E+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAGWEQIKRFTLLPQAFSTQLEEITPTLKLRRKVILRRYKEQIEAMY 594
>gi|399025084|ref|ZP_10727101.1| AMP-forming long-chain acyl-CoA synthetase [Chryseobacterium sp.
CF314]
gi|398079003|gb|EJL69880.1| AMP-forming long-chain acyl-CoA synthetase [Chryseobacterium sp.
CF314]
Length = 592
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNA-PEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+E+ +++ LKLG++ + +I N+ EW DLG G + +Y SPE
Sbjct: 37 QEFINEANKISRGLLKLGIKPGDKIALITTNSRTEWAIVDLGLSQIGVVSVPVYPNISPE 96
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
++ C V D K++KVK P L+ I ++ G +W E+++LG
Sbjct: 97 DYEFIFTNAEIQYCFVSDKDLFNKVMKVKHNIPSLQGIFTFD---TISGAANWKEILDLG 153
Query: 324 RAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF----K 378
+ ++ + I + + T++YTSGT G K VML+H NI N I
Sbjct: 154 EDDSTQIEVEELSNAINSEDLATIIYTSGTTGKPKGVMLTHHNIVSNVLGSIPRIPKKKS 213
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L+ + V+SFLP+ HI + + Y +++FA+
Sbjct: 214 LDYKEVRVLSFLPICHIFERML-FYLFQYNGFSIYFAE 250
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 100 EKNVSEPYTYR--LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEV 157
+K VS+P + + L+ K ++ +G + + +SG+A +ST L F + IPI E
Sbjct: 306 KKEVSKPSGIQEIIADKLVFKKWREGLGGEIITL-VSGSAALSTRLNLMFQNAGIPILEG 364
Query: 158 FGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAK 216
+G++E + +V++ + K+ VG + + KI + E G K Y N T +
Sbjct: 365 YGLTETSPVISVNSFEKMKIGTVGLPLDNLKVKIQEDGEITVKGPSVFKGYFKNEETSKE 424
Query: 217 AFLKLG 222
AF + G
Sbjct: 425 AFTEDG 430
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 438 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ N +KI+K E P ++I TG L PT+K+KR V +K+ + +K YD
Sbjct: 542 LGNWEKIKKIELTPEVWAIDTGLLTPTLKLKRKAVKEKFMDLYNKMYD 589
>gi|251791879|ref|YP_003006599.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter aphrophilus NJ8700]
gi|247533266|gb|ACS96512.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter aphrophilus NJ8700]
Length = 595
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + + ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQIDQISLALLANHIDIQDKIGIFAHNMPRWTITDIGTLQIRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I V D +Q ++++ + +CP L+ IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFVGDQEQYDQVIDIAEECPTLQKIVAMKNTIHLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
E +++ L + L++ + TL+YTSGT G K VML + N+ Q
Sbjct: 154 EFIDMADEQYQVELQQRLDSKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
K++ + +S +SFLPLSHI + Y + AA + D N ++
Sbjct: 214 KVDDSDVS-LSFLPLSHIFERAWVAYVLHRGAANCYIEDTNQVR 256
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPY----TYRLVRWLILSKVKQAMGLDRCRVSLS 134
+++WI ++A + QH+ A L K + Y L L+L K++ +G R R+
Sbjct: 291 LRQWIFHWAMAIGHQHFDA-LAKGQKIGFLLKQQYSLANKLVLGKLRALLG-GRIRMMPC 348
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G A + + +F S+ + I +GM+E TVS DD F + +G +PG + KI
Sbjct: 349 GGAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWDDVNFNANSIGSLMPGAEVKIG 406
Query: 193 DPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ +E G + +K Y + A+AF G
Sbjct: 407 ENNEILVRGGMVMKGYYKKPQETAEAFTADGF 438
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++I++F LP FS E+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAGWEQIKRFTLLPQAFSTQLEEITPTLKLRRKVILRRYKEQIEAMY 594
>gi|111024068|ref|YP_707040.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110823598|gb|ABG98882.1| probable long-chain-fatty-acid--CoA ligase [Rhodococcus jostii
RHA1]
Length = 613
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 11/225 (4%)
Query: 188 QTKIVDPDE-----EGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T +DPD G+ + + ++Y + VR VA F LG+ R +V ++ N E++
Sbjct: 16 RTAAIDPDAIALRTVGDAQTLTWRQYSSQVRDVAAGFAALGVRRGDTVALMMANRVEFYP 75
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA + G + +Y T A + L ++A + V E + +E+I + AQ ++ +
Sbjct: 76 IDVGAQHVGATSFSIYNTLPASAIAYVLGNAEAKVVVCE-AQYVERIRESGAQVEQI-VV 133
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ EG G ++ +++ LG +PD D +++ ++ TL+YTSGT G K V
Sbjct: 134 IDAEGGIAPAGTLTLNQMKALG--SPDFDFDAAWQSVRPDDVATLIYTSGTTGNPKGVES 191
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM 406
+H + F A + +E + SF+P +HIA + +Y M
Sbjct: 192 THAALLFEAGAVCWILPIEFGD-RITSFMPSAHIADRMTALYFQM 235
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 47 RTAAQYPDQVALCQKQENGEWKKVTYKLQTTGVKRWIANY---AKSTSLQ-------HYM 96
R AA PD C+ G +V KL+ V+R +AN A+ +LQ +
Sbjct: 249 RIAAALPD----CRPTIWGAVPRVWEKLKI-AVERAVANEPDDARRHALQWGLDVGARRI 303
Query: 97 AYLEKNVSEP----YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDI 152
L + P + + ++L+ ++ +G + R ++SGAAPI + +F +L +
Sbjct: 304 EMLRAGLPVPEELEHEFVTAESMVLAPMRAELGFHKLRWAVSGAAPIPADTLAFFSALGL 363
Query: 153 PICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG-NGEICLKEYEANV 211
I E++GMSE + + D KL VG+ +PG ++ + E G + +K Y
Sbjct: 364 QISEIWGMSELTCIASAAPADPAKLGTVGKIVPGMDMRVANDGELFVRGPLVMKGYRGEP 423
Query: 212 RTVAKA 217
A A
Sbjct: 424 AKTADA 429
>gi|451346780|ref|YP_007445411.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
gi|449850538|gb|AGF27530.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
Length = 546
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDRLCRQTAKGLMKLGIEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPELKTCEHGRLRSKRYPFLRTVLYIGDKS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ WD L++ G A D +LD ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 PPGMHRWDSLLKEGEAVTDAALDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S+ I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSSDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|398339044|ref|ZP_10523747.1| long-chain-fatty-acid CoA ligase [Leptospira kirschneri serovar Bim
str. 1051]
Length = 629
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 4/196 (2%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
+G+++ V ++ N EW +D G I G T + ++ L S+ + +E
Sbjct: 1 MGVQQKQKVGLLADNRIEWIIADYGVILTGAANVPRGTDITDSEIVYILNHSEVEVVFIE 60
Query: 281 DDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG---RAAPDESLDRVLET 337
+DK LEK + K+Q +K ++ + + PGV+ EL+E G RA + + +
Sbjct: 61 NDKMLEKFNRNKSQLTNVKTLIMMDPTSNSPGVLKMQELLEKGKSLRAGGSKKAEERIAA 120
Query: 338 IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAA 397
I + TL+YTSGT G K VML H N+ + +++ A ++S LP+ H+
Sbjct: 121 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGA-RLLSILPIWHVFE 179
Query: 398 QTVDIYSVMTVAATLW 413
+ V+ + AAT +
Sbjct: 180 RVVEYVCIGLGAATYY 195
>gi|429756549|ref|ZP_19289138.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429171084|gb|EKY12726.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 590
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
EY TV++ L+LG+E+ + +I N EW D+G + G +Y T + E
Sbjct: 39 EYIQKANTVSRGLLRLGIEKNDKIAVISSTNRTEWHVLDIGILQVGAQNVPIYPTINLED 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L S+ CVV D + EKI ++ + P LK I + D P W E+++LG
Sbjct: 99 FEYILNHSECKYCVVSDKELWEKISSIQDKLPHLKTIFTFN---DVPYAHHWQEILDLGA 155
Query: 325 AAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+++ ++ ++I ++ T++YTSGT K VMLSH NI N + +
Sbjct: 156 DESNQAEVEARKDSIQKDDLATIIYTSGTTSRPKGVMLSHWNIISNILNCQDRLPITEGS 215
Query: 384 LSVISFLPLSHI 395
+ +SFLP+ H+
Sbjct: 216 -TALSFLPVCHV 226
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+KR + +A + Q Y Y + +L R LI SK ++A+G R ++ +SG+A
Sbjct: 286 GIKRKLFFWALNLGFQ-YEPYGANGAWYQFKLKLARKLIFSKWREALG-GRIQMIVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+S L + F + + I E +G++E A V+ +K+ VG+ I KI +
Sbjct: 344 ALSPRLAKVFSAAGLKIMEGYGLTETAPVIAVNRESGRFWKIGTVGKPIVNIDVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI +K
Sbjct: 402 ---DGEILVK 408
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
++++ F+F P +++I G L PT+K+KR + +KY I +KFY+
Sbjct: 546 EQVKLFDFTPDEWTIDGGHLTPTLKLKRRVIKEKYIDIYNKFYN 589
>gi|375362485|ref|YP_005130524.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371568479|emb|CCF05329.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 546
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDRLCRQTAKGLMKLGIEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPELKTCEHGRLRSKRYPFLRTVLYIGDKS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ WD L++ G A D +LD ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 PPGMHRWDSLLKEGEAVTDAALDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S+ I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSSDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|312137599|ref|YP_004004935.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311886938|emb|CBH46247.1| putative acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 605
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 96/206 (46%), Gaps = 5/206 (2%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P EG + E VR +A + LG++ V + EW +DL + AG
Sbjct: 35 PGGEGWVSVTWSEVGQRVRRLAAGLIALGVQSEQRVALASATRYEWVLADLAVMCAGAAT 94
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDKPG 312
+Y T + + S + I V EDD QL K+ + + + P + +V +G PD
Sbjct: 95 TTVYPTTTASDVAFIVANSGSRIVVAEDDAQLAKLREHREEIPDVARVVLLDGTVPDDDW 154
Query: 313 VISWDELMELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFN 369
VI +DEL LG E D V E IA + TL+YTSGT G K V L H T+
Sbjct: 155 VIGFDELAALGERLLAERSDVVDERIAGISPDSLATLIYTSGTTGRPKGVRLPHSAWTYE 214
Query: 370 AACIIQYFKLESAALSVISFLPLSHI 395
AA I L++ L + +LPLSH+
Sbjct: 215 AAAIDATGILDADDLQYL-WLPLSHV 239
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 32/185 (17%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNV---SEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
G+K I ++A L A N + Y + L+ K++ G R + +S
Sbjct: 299 GIKEKIFDWAMGVGLAASKARQSGNSLSRMQKAQYAIADRLVFQKIRDRFG-GRLKFFIS 357
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G+A + ++ ++F ++ I + E +G+SE + A V+ P ++ VG IPGT KI +
Sbjct: 358 GSAALDRDVAQWFDAVGIVVLEGYGLSETSAASLVNRPSAYRFGTVGWPIPGTDVKIAE- 416
Query: 195 DEEGNGEICLK------EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAI 247
+GEI +K Y N + A+A G WF++ D+G +
Sbjct: 417 ----DGEILIKGPGVMSGYHENPQATAEALEPDG----------------WFHTGDIGTV 456
Query: 248 YAGGF 252
A GF
Sbjct: 457 DANGF 461
>gi|397737645|ref|ZP_10504310.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396926377|gb|EJI93621.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 613
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 11/225 (4%)
Query: 188 QTKIVDPDE-----EGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T +DPD G+ + + ++Y + VR VA F LG+ R +V ++ N E++
Sbjct: 16 RTAAIDPDAIALRTVGDAQTLTWRQYSSQVRDVAAGFAALGVRRGDTVALMMANRVEFYP 75
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA + G + +Y T A + L ++A + V E + +E+I + AQ ++ +
Sbjct: 76 IDVGAQHVGATSFSIYNTLPASAIAYVLGNAEAKVVVCE-AQYVERIRESGAQVEQI-VV 133
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ EG G ++ +++ LG +PD D +++ ++ TL+YTSGT G K V
Sbjct: 134 IDAEGGIAPAGTLTLNQMKTLG--SPDFDFDAAWQSVRPDDVATLIYTSGTTGNPKGVES 191
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM 406
+H + F A + +E + SF+P +HIA + +Y M
Sbjct: 192 THAALLFEAGAVCWILPIEFGD-RITSFMPSAHIADRMTALYFQM 235
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 47 RTAAQYPDQVALCQKQENGEWKKVTYKLQTTGVKRWIANY---AKSTSLQ-------HYM 96
R AA PD C+ G +V KL+ V+R +AN A+ +LQ +
Sbjct: 249 RIAAALPD----CRPTIWGAVPRVWEKLKI-AVERAVANEPDDARRHALQWGLDVGARRI 303
Query: 97 AYLEKNVSEP----YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDI 152
L + P + + ++L+ ++ +G D+ R ++SGAAPI + +F +L +
Sbjct: 304 EMLRVGLPVPEELEHEFVTAESMVLAPMRAELGFDKLRWAVSGAAPIPADTLAFFSALGL 363
Query: 153 PICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG-NGEICLKEYEANV 211
I E++GMSE + + D KL VG+ +PG ++ + E G + +K Y
Sbjct: 364 QISEIWGMSELTCIASAAPADPAKLGTVGKIVPGMDMRVANDGELFVRGPLVMKGYRGEP 423
Query: 212 RTVAKA 217
A A
Sbjct: 424 AKTADA 429
>gi|448732146|ref|ZP_21714428.1| acyl-CoA synthetase [Halococcus salifodinae DSM 8989]
gi|445805058|gb|EMA55285.1| acyl-CoA synthetase [Halococcus salifodinae DSM 8989]
Length = 645
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 14/220 (6%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
+VR +A F LG+E V I EW +D + AGG +YT +SP+ + L
Sbjct: 72 SVRRLAAGFRDLGVEAGDRVGIFANTRMEWAQTDFALLAAGGVVTTVYTGSSPDQVEYLL 131
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDELMELGRAA 326
A VVE+++ LE++L V+ + L+ +V + +G D+ V++ ++ E G A
Sbjct: 132 DDPGATGVVVENEELLERVLAVEDEL-DLEFVVSMDEIDGYGDRDDVLTLAQVHERGVGA 190
Query: 327 PD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-----KLE 380
D ++ + L+ A ++ +L+YTSGT G K V L+H N N + + F K +
Sbjct: 191 FDADAYEGWLDDRAPDDLASLIYTSGTTGQPKGVQLTHRNFKSNVDQVYRRFGPRPDKGD 250
Query: 381 SAALSV----ISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ A+ ISFLPL+H+ + + + AT+ +A+
Sbjct: 251 TPAIDTDSEAISFLPLAHVFERLSGHFLMFAAGATVGYAE 290
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ +V++A+G + +SG +S +L F + +PI E +G++E A +V+ P++
Sbjct: 365 LVFGQVREALGGN-VEFLISGGGSLSPDLAELFHGMGVPILEGYGLTETAPVVSVNPPEE 423
Query: 175 FKLDGVGRTIPGTQTKI 191
++ +G + + +I
Sbjct: 424 PEVGTIGPPVHDEEVRI 440
>gi|255535710|ref|YP_003096081.1| Long-chain-fatty-acid--CoA ligase [Flavobacteriaceae bacterium
3519-10]
gi|255341906|gb|ACU08019.1| Long-chain-fatty-acid--CoA ligase [Flavobacteriaceae bacterium
3519-10]
Length = 590
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+E+ V++ LKLG++ + +I EW D+G G + +Y T S +
Sbjct: 37 QEFHNMANKVSRGLLKLGIKPGDKISLITTATRTEWAIMDMGISQIGAVSVPVYPTISSD 96
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
++ C D + L+K+LK+K+ P L+ I ++ G +W+E+++LG
Sbjct: 97 DYGFIFNDAEVKYCFASDRELLDKVLKIKSIVPSLQGIFTFD---QIEGAANWNEVLDLG 153
Query: 324 R-AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC----IIQYFK 378
A ++ + +I + + TL+YTSGT G K VML+H NI N I +
Sbjct: 154 SDEASQNEVEDIANSINSEDLATLIYTSGTTGKPKGVMLTHHNIVSNVLASNSRIPRVKG 213
Query: 379 LESAALSVISFLPLSHI 395
LE + ++SFLP+ HI
Sbjct: 214 LEYTDIKILSFLPICHI 230
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 100 EKNVSEPYTYR--LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEV 157
++N+S+P + + L+ K ++ +G + + +SG+A +S L + F + IPI E
Sbjct: 306 KQNISKPSGLKEIIADKLVFKKWREGLGGNIITL-VSGSASLSARLNKLFQNAGIPILEG 364
Query: 158 FGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAK 216
+G++E + +V++ K+ VG + KI + E G K Y N +
Sbjct: 365 YGLTETSPVISVNSFGKIKVGTVGHVLENLDVKIQEDGEITVKGPSVFKGYFKNEEMTKE 424
Query: 217 AFLKLGLER 225
AF G R
Sbjct: 425 AFTDDGYFR 433
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 430 IDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
ID N K + N ++I+KFE P ++I G L PT+K+KR + ++Y + ++ Y
Sbjct: 535 IDLLNSK-LGNWEQIKKFELTPEAWTIEQGVLTPTLKLKRKALKERYLDLYNQMY 588
>gi|392411995|ref|YP_006448602.1| AMP-forming long-chain acyl-CoA synthetase [Desulfomonile tiedjei
DSM 6799]
gi|390625131|gb|AFM26338.1| AMP-forming long-chain acyl-CoA synthetase [Desulfomonile tiedjei
DSM 6799]
Length = 632
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 22/230 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ ++Y NV+ +A + LG + + I+G N PEW YS+L GG + G++ +
Sbjct: 34 VTWQKYLQNVKFLALGLVALGYRKGDKLAILGDNRPEWVYSELAIQCLGGASVGIFPDSH 93
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWD 317
+ + + SDA V ED +Q++K L++K CP ++ ++ + K D P +I
Sbjct: 94 IDQVKYIINHSDAVFLVAEDQEQVDKFLELKDSCPGVRKVIVDDTKGMRHYDDPLIIPLK 153
Query: 318 ELMELGRAAPDESLDR--------VLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
+ +LGR LDR ++ + + + YTSGT G K ML+H+N+
Sbjct: 154 TVQDLGR-----DLDRHEPQLFQQYIDELTGDTVAIIAYTSGTTGLPKGAMLTHNNMIKM 208
Query: 370 AACIIQYFKLESA--ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
AA Y ++ A + +SFLPL + Q + + T+ F +K
Sbjct: 209 AA---NYDVIDPAYPTDNHVSFLPLPWVGEQMTAVSWNLYKGFTVNFPEK 255
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 114 WLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPD 173
+LI +K GL R +G A + ++ F +L + I +++G +E +G
Sbjct: 333 FLIFRSLKNYFGLAHLRNVYTGGAALGPDIFNLFQALGVNIKQIYGQTETSGISVAHRNG 392
Query: 174 DFKLDGVGRTIPGTQTKIVDPDEEGNGEIC----------LKEYEANVRTVAKAFLKLG 222
D KL VGR IP + KI D +GEI K+ EA +T+A +L G
Sbjct: 393 DIKLHTVGRPIPEMEIKISD-----SGEILTRGPTVFAGYYKDEEATRKTMAGGWLNSG 446
>gi|126435871|ref|YP_001071562.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
gi|126235671|gb|ABN99071.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 597
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 8/214 (3%)
Query: 190 KIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
++VD D ++ + A +R+VA + G++ V ++ EW D +
Sbjct: 37 RLVDGDWT---DVTCGQAAAQIRSVALGLIASGVQPGDRVALLSATRYEWPIIDFAILAV 93
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD 309
G +Y T+S E L S A + +VE+D +++ +++A P+L+ +++ EG
Sbjct: 94 GALTVPIYETSSAEQVRWVLSDSGAVLAIVENDAHADRVEQLRADLPELRTVLRIEGS-- 151
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
G + D L E GR LD L I + E T++YTSGT G K L+H N+ F
Sbjct: 152 --GTGAIDALAEAGRDVAPAELDDRLAGIRSAEPATMIYTSGTTGRPKGCQLTHANLVFE 209
Query: 370 AACIIQYFKLE-SAALSVISFLPLSHIAAQTVDI 402
F + + ++ FLPL+H+ A+ + I
Sbjct: 210 IRGAKSCFPTQLTKGERMLVFLPLAHVLARAITI 243
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 20/175 (11%)
Query: 80 KRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPI 139
K I + A +T++++ A + + + L+ K++ A+G CR ++SG AP+
Sbjct: 296 KGRIFDIAAATAIEYSQAEGGPGLLLRAKHAVFDRLVYGKLRAALG-GECRAAISGGAPL 354
Query: 140 STELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EG 198
L ++ + + I E +G++E + A TV+ DD K+ VG+ +PG ++ D DE
Sbjct: 355 GARLGHFYRGVGLTIYEGYGLTETSAAITVNRVDDIKIGSVGKLLPGNSMRLGDDDELLV 414
Query: 199 NGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+G + Y N AKAF WF++ DLGAI GF
Sbjct: 415 SGGVVFGGYWRNEEETAKAFTD-----------------GWFHTGDLGAIDDDGF 452
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN +++S A+ I+KF LP DF+ TGEL PT+KVKR V +K+ I+ Y
Sbjct: 541 AVKEAN-QAVSKAEAIRKFRILPVDFTEDTGELTPTLKVKRAVVAEKFADHIEALY 595
>gi|86158767|ref|YP_465552.1| AMP-dependent synthetase/ligase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775278|gb|ABC82115.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 604
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 23/242 (9%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E R V+ GL V IIG EW +DLG + AGG +Y +N
Sbjct: 44 DVSWAEMARRARDVSDGLASFGLRAGDRVAIIGDTNLEWILADLGILGAGGITVTIYQSN 103
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDE-L 319
+P C + L S A + Q+ KI +V+ + P L+ +V+ +G P +++ L
Sbjct: 104 TPAECQYILADSGARFVFCDSAAQVAKIREVRGKLPALEGLVRAQG----PAADAFERTL 159
Query: 320 MELGRAA-------PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
++ RA PD R L I ++ + +YTSGT G K V+L+H N + A
Sbjct: 160 ADVERAGVAWRASNPDAHAAR-LARIRRDDPASFIYTSGTTGNPKGVVLTHGNWVYEALA 218
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDR 432
++ K+ ++ FLP++H A+ ++ +WF+ ++ + +D
Sbjct: 219 -VEGLKVVRPDDLILMFLPMAHSFAKVIE---------AVWFSTGATGAFVESLEKIVDN 268
Query: 433 AN 434
A
Sbjct: 269 AG 270
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +ID N + S A I+KFE LP DF+ TGEL PT+KVKR V ++YQ+++D FY
Sbjct: 546 QQSIDALNARQASYAT-IKKFEILPRDFTQATGELTPTLKVKRKVVTQQYQALLDSFY 602
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 128 RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGT 187
R R+ +SG AP+S ++ +F L I E +G++E + V+ P ++ VG +PGT
Sbjct: 353 RMRLFVSGGAPLSPKIAHFFDQLGFVILEGYGLTETSAGTFVNRPGANRIGTVGPPVPGT 412
Query: 188 QTKIVDPDE-EGNGEICLKEYEAN 210
+ +I + E G +KEY N
Sbjct: 413 EVRIAEDGEIMVRGPCVMKEYYNN 436
>gi|376296490|ref|YP_005167720.1| AMP-dependent synthetase and ligase [Desulfovibrio desulfuricans
ND132]
gi|323459051|gb|EGB14916.1| AMP-dependent synthetase and ligase [Desulfovibrio desulfuricans
ND132]
Length = 637
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 19/221 (8%)
Query: 207 YEANVRTVAK---AFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+E ++R A+ LG+ R V +IG N PEW +++L GG A G+Y + E
Sbjct: 39 WEDSLRITAEFACGLEGLGIGRGDIVILIGNNRPEWIWAELAVQGLGGMALGLYQDSPAE 98
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK------PGVISWD 317
+ ++ + V ED +Q++K+ ++ + P+L IV ++ K K PG+ S++
Sbjct: 99 EIEYVFALTECRLVVAEDQEQVDKVRAIRRRLPELANIVYHDPKGLKPYEARVPGLRSFN 158
Query: 318 ELMELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
+ LGR + R E + C + TSGT G K +LSH N+ A +
Sbjct: 159 AVRRLGRERGGDCTARFKEAARATKPGDPCLIATTSGTTGRPKLAVLSHKNLLSMAHNLG 218
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
+Y +SA+ +SFLPL+ + Q +M VA+ L F
Sbjct: 219 KY-DPKSASDEFVSFLPLAWMGEQ------MMAVASALLFG 252
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 74 LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEP---YTYRLVRWLILSKVKQAMGLDRCR 130
++TT +KRW+ N + A P + YRL + ++ +G R R
Sbjct: 295 METTPLKRWLYNRCLPVGYEFVDAVFAGGTPSPWLRFKYRLADQGLFRALRDRLGFSRLR 354
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK 190
+ +G A + ++ R+F ++ + + +++G +E AG + + VG IP T+ +
Sbjct: 355 SATTGGAALGPDVFRFFHAMGVNLKQIYGQTEIAGISCIHKEGEVDFTSVGSPIPETEVR 414
Query: 191 IVDPDE 196
I + E
Sbjct: 415 ISETGE 420
>gi|91791441|ref|YP_561092.1| AMP-dependent synthetase and ligase [Shewanella denitrificans
OS217]
gi|91713443|gb|ABE53369.1| AMP-dependent synthetase and ligase [Shewanella denitrificans
OS217]
Length = 597
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 10/227 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+ K +++ VAKA +K GL+ + I+ N P+W +D+G + A +Y ++
Sbjct: 36 RVSWKAFDSISHQVAKAMIKFGLQAQDTAVILSQNCPQWTCADIGLLKARAIVVPVYPSS 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP---DKPGVISWD 317
+ E + + A + V+D +Q K++A CP ++ +V ++ D P + +D
Sbjct: 96 TQEQASFIINDAGAKVLFVDDAEQYHMACKLQAVCPSVEYLVVFDANVPLLDTPNHLHFD 155
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY- 376
L+ +A D +L L+ ++ TL+YTSGT G K VML + N+ A+ I Q+
Sbjct: 156 SLITEDLSAQDRALTERLQAANLDDLLTLIYTSGTTGDPKGVMLDYRNM---ASTIRQHD 212
Query: 377 --FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
S ++FLPLSH+ ++ +++ ++ D +K
Sbjct: 213 TCLNFNPGDTS-LAFLPLSHVFERSWSFFALCRGGRNVYLKDTMKIK 258
>gi|302341459|ref|YP_003805988.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
gi|301638072|gb|ADK83394.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
Length = 596
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI +E V VA+A +KLGL +V I N+P W +DLG + A A ++ +
Sbjct: 33 EISWREMGRQVNAVARALIKLGLAEKQAVAIFAANSPWWTIADLGILNARCMVAPIHAPS 92
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + S+A + V +Q K++K Q L+ IV ++ P ++ +D
Sbjct: 93 TMGQAKYIVDDSNARLIFVGGQEQYAKVMKFFGQTEGLQTIVCFDRHVRLEQNPNIMYFD 152
Query: 318 ELMELGRAAPDES--LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
+ + LG+AA D ++ L ++ TL+YTSGT G K VML H N + +
Sbjct: 153 DFLALGQAAQDAGAEVEARLGRARADDLVTLIYTSGTTGEPKGVMLDHANFYHQYISLPE 212
Query: 376 YFKLESAALSVISFLPLSHI 395
F + + S + LPLSH+
Sbjct: 213 RFAMFDSDRS-LCLLPLSHV 231
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K + +KIQKF LP +F+I GE+ PT+K+KR ++ KY I+ Y
Sbjct: 546 KDLEKHEKIQKFILLPEEFTIEEGEMTPTLKLKRKVILAKYADRIEAMY 594
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L K++Q G RV AP+S E+ +F ++ I +C FGM+E T + D
Sbjct: 331 LVLKKIRQLTG-GEIRVFPCAGAPLSPEIDEFFWAVGIFVCLGFGMTETTATVTCPSADH 389
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE 197
+ G I T+ K+ PD E
Sbjct: 390 KRFGTCGTAIKDTELKLA-PDGE 411
>gi|291279849|ref|YP_003496684.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
gi|290754551|dbj|BAI80928.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
Length = 610
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 11/211 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA+ KLG++ V I+ N P W +D+G + AG +Y TN+PE + L S+
Sbjct: 49 VARGLRKLGIKPGDRVAILSENRPGWVIADMGILSAGAVTVPIYATNTPEQVKYVLNHSE 108
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPGVISWDELMELGRAAPDES 330
+ + + + Q +K++++K + P ++ I+ ++ G D P V + +L E+ D+
Sbjct: 109 SRVVFISNKVQYDKLVQIKDEIPHVEHIISFDRFLGTKDFP-VNTHLQLAEISVPLTDDE 167
Query: 331 LDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE--SAALS 385
+ + E IA ++ TL+YTSGT G K VML+H N F + I+ K+E
Sbjct: 168 KNEIEEIIAKIEPDDLATLIYTSGTTGVPKGVMLTHYN--FVSEIILGTKKVEVLKPEDK 225
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPLSH + V Y + + FA+
Sbjct: 226 FLSFLPLSHALERAVGYYIPIYNGCQMVFAE 256
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A++ LK++K I+ K + + I+KF +P DF+I GEL PT+K+KR +
Sbjct: 535 ANEKILKLFKERVEEIN----KKLPKYETIKKFSLVPVDFTIEGGELTPTLKLKRRVIYN 590
Query: 475 KYQSIIDKFY 484
KY+ I+ Y
Sbjct: 591 KYKDKIECLY 600
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 25/151 (16%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ Y LI SK+++ G + +SG AP+ + +F + +PI E +G++E +
Sbjct: 328 FKYAFFDKLIFSKIRERFG-GNIQGFVSGGAPLDKNINEFFWVIGMPIFEGYGLTETSPG 386
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG----NGEICLKEYEANVRTVAKAFLKLG 222
++ + VG T K+ DE+G G + +K Y N +A + G
Sbjct: 387 VCINTFKQVRFGSVGTMFEHTYAKL---DEDGELLLKGPMIMKGYYKNEEATKEALDEEG 443
Query: 223 LERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
WF + D+G I GF
Sbjct: 444 ----------------WFRTGDIGKIDEDGF 458
>gi|222524463|ref|YP_002568934.1| AMP-dependent synthetase and ligase [Chloroflexus sp. Y-400-fl]
gi|222448342|gb|ACM52608.1| AMP-dependent synthetase and ligase [Chloroflexus sp. Y-400-fl]
Length = 656
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 8/222 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +++ +VR A LG+ R + I+G N PEW Y++ A G + G+Y +
Sbjct: 44 VTWRQFADHVRAFAMGLHALGVRRGDVIAILGDNRPEWLYAEFAAQTIGAMSIGVYQDSV 103
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWD 317
E + + + A + VVED +Q++KI+++ + + ++ YE K +P + +
Sbjct: 104 AEEVYYIVSAAGARVIVVEDQEQVDKIIEIWPRLEGVLKVIYYEPKGMRNYRQPYLADFP 163
Query: 318 ELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
+ ELGR E + L ++ L TSGT G K ML+H N+ A ++
Sbjct: 164 SIEELGRTYDREHPGLFEAELAAGKPDDVAILSTTSGTTGKPKLAMLTHRNMISQGAGLL 223
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +SFLPL+ + Q V + + M T+ F +
Sbjct: 224 SVDPL-GPDDEFVSFLPLAWVGEQMVTVAAGMQCGFTINFPE 264
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L R L+ +K +GL + + +G A + ++ R++ ++ + + +V+G +E AG
Sbjct: 338 YGLARLLVFEMLKDHLGLRFLKRAYTGGAALGPDVFRFYHAIGVNLKQVYGQTESAGLSV 397
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ K VG +P TQ +I + NGEI +K
Sbjct: 398 IHRDGQIKFQTVGTPLPNTQIRIAE-----NGEILVK 429
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY + ++RAN + A +I++F L + GEL T KV+R V ++YQ I+
Sbjct: 546 QVYALIRKDVERAN-ADLPPAARIRRFLLLHKELDADDGELTRTRKVRRRLVAQRYQEIV 604
Query: 481 DKFY 484
D Y
Sbjct: 605 DALY 608
>gi|367469609|ref|ZP_09469352.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
gi|365815330|gb|EHN10485.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
Length = 609
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 188 QTKIVDPDE------EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T +DP+ G EI ++Y VR +A LG+ R ++ ++ N PE+
Sbjct: 28 RTAAIDPEAIALRTPGGEVEIRWRDYAERVRRIAAGLAALGVRRGDTIGLMLVNRPEFHL 87
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D AI+ G +Y T++PE +H L + N V+ + + L+++L + ++ +
Sbjct: 88 CDTAAIHLGAAPFSVYNTSAPEQIVH-LFGNAGNRVVLCERQFLDRVLAARPAT-AVEHV 145
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ +G D P IS ++L LG P D ++ ++ TL+YTSGT G K V L
Sbjct: 146 ILVDG--DDPDAISLEQLEALGE--PSFDFDATWRAVSGDDLLTLIYTSGTTGPPKGVEL 201
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM 406
+HDN+ LE + S+LP +HIA + + YS M
Sbjct: 202 THDNLLAELRAAAAVLPLEFGDRAP-SYLPSAHIADRWLSHYSAM 245
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+GLD+ R S+SGAAPI ++ YF +L +PICE++GMSE + ++ PD
Sbjct: 341 LVLGPLRAAIGLDQVRWSVSGAAPIPPDVLEYFGALGLPICELWGMSELSCCAAINPPDR 400
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG +PG + ++ D +GE+ ++
Sbjct: 401 IKIGTVGPAVPGLELRLAD-----DGEVLVR 426
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 432 RANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
RAN + +S ++I++F LP D+ EL PT K+KR + KY + I+ Y
Sbjct: 556 RAN-ERLSRVEQIKRFRILPVDWEPGGDELTPTSKLKRKPIAAKYAAEIEGLY 607
>gi|241766344|ref|ZP_04764230.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
gi|241363509|gb|EER58964.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
Length = 606
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
LGL V +I N EW + +GA G G+Y T+ + + +D I V E
Sbjct: 56 LGLPEGGHVGVISENRIEWVLTQMGAGLVGAVTVGVYPTSPSPEVAYVVGHADIEIIVCE 115
Query: 281 DDKQLEKILKVKAQCPKLKAIVQYEGK------PDKPGVI-SWDELMELG-RAAPDESLD 332
D +Q +K+L+ + P+LK IV E K P+ G+I ++DE+ +LG R+ ++D
Sbjct: 116 DQEQTDKVLEALVELPRLKKIVVMETKGLRSFAPEVRGLIATFDEVEQLGQRSGKLAAID 175
Query: 333 RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPL 392
L ++ ++YTSG+ G K M+S+ NI I+ +L S + +S+LPL
Sbjct: 176 AALARQQLDDIGLMIYTSGSTGKPKGAMISYRNIRGMVPGIVDRLQL-SRETTHLSYLPL 234
Query: 393 SHIAAQTVDIYSVMTVAATLWFAD 416
H+A Q + + + V + + F +
Sbjct: 235 CHVAEQMLTTFVPVYVGSQVNFGE 258
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 67 WKK----VTYKLQTTGVKRWIANYAKSTSLQHYMAYLEK---NVSEPYTYRLVRWLILSK 119
W+K ++ KLQ TG R A + K+ + +A + ++ E +TY WL+
Sbjct: 282 WEKMHAAISIKLQETGGLRR-ALFRKAYAACQPLAEKPRARWSIGEMFTYTACYWLVFRA 340
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG 179
++ +GL +V+L+GAAPI ++ R+F L +P+ EV+G++E G T DD ++
Sbjct: 341 LQNFIGLREAKVALTGAAPIPPDVVRFFRVLGVPLVEVYGLTESTGMVTGHKLDDVQVGT 400
Query: 180 VGRTIPGTQTKIVD-PDEEGNGEICLK 205
VG G + +I D++ GE +K
Sbjct: 401 VGVPTSGVEWRIAKGSDDDLGGEFQIK 427
>gi|157111132|ref|XP_001651401.1| hypothetical protein AaeL_AAEL005760 [Aedes aegypti]
gi|108878504|gb|EAT42729.1| AAEL005760-PA, partial [Aedes aegypti]
Length = 64
Score = 92.0 bits (227), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/63 (68%), Positives = 50/63 (79%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V +A Q IDRAN K+ISNAQK+QKF L ADFS+P GELGPT+KVKR V+KKY II+
Sbjct: 1 VLQAIQEGIDRANKKAISNAQKVQKFALLSADFSVPGGELGPTLKVKRNIVLKKYDDIIE 60
Query: 482 KFY 484
KFY
Sbjct: 61 KFY 63
>gi|448577228|ref|ZP_21642858.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
gi|445727873|gb|ELZ79482.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
Length = 667
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 14/229 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ + + VR +A F LGL+ V + EW +D + AGG +YT++
Sbjct: 64 ELTYESMQDIVRKLAAGFRDLGLDAEDRVGLFAHTRMEWAQTDFAVLAAGGVVTTVYTSS 123
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWD 317
S + L AN VVE+++ LE++L V+ LK +V + EG D+ +++
Sbjct: 124 SERQVRYLLSDPGANAVVVENEELLERVLAVEDDL-DLKFVVVMDELEGHDDRDDILTLG 182
Query: 318 ELMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
EL G D E+ + L+ + +L+YTSGT G K V LSH N N +
Sbjct: 183 ELYRRGEDVFDEETYESWLDARDPEDLASLIYTSGTTGQPKGVKLSHWNFRSNVNESYRR 242
Query: 377 FK---------LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
F S+ +SFLPL+H+ + + + AT+ +A+
Sbjct: 243 FGPHPGRDDAPFISSDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAE 291
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L L+ +V+ A+G + +SG +S EL + + +PI E +G++E + +
Sbjct: 360 HQLADRLVFEQVRDALGGN-MEFFISGGGSLSAELCALYHGMGLPIFEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P++ K+ +G + + K+
Sbjct: 419 VNPPEEPKIGTIGYPLRNVEVKL 441
>gi|423220287|ref|ZP_17206782.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
gi|392623364|gb|EIY17467.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
Length = 601
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++ VR A AF+ LG+E ++ I N PEWFY D GA Y T+S
Sbjct: 36 ISWNQFSGTVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRYLFVGEQFQYDAAFSIFGFCSSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M +G P +++++ E + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMAMGEGLPHNDTVEARTERASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ +S FLPL+H+
Sbjct: 209 FHTHDDRLTTMSDKDVSMNFLPLTHV 234
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETTGLKKALMLDAIKVGRIHNLDYLRRGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGVEVKIGEDNE 416
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ ++ ++I++F LP FS+ GEL T+K+KR V + Y +I+K Y+
Sbjct: 551 QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRAVVAQNYSELIEKMYE 600
>gi|163846661|ref|YP_001634705.1| AMP-dependent synthetase and ligase [Chloroflexus aurantiacus
J-10-fl]
gi|163667950|gb|ABY34316.1| AMP-dependent synthetase and ligase [Chloroflexus aurantiacus
J-10-fl]
Length = 649
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 8/222 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +++ +VR A LG+ R + I+G N PEW Y++ A G + G+Y +
Sbjct: 37 VTWRQFADHVRAFAMGLHALGVRRGDVIAILGDNRPEWLYAEFAAQTIGAMSIGVYQDSV 96
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWD 317
E + + + A + VVED +Q++KI+++ + + ++ YE K +P + +
Sbjct: 97 AEEVYYIVSAAGARVIVVEDQEQVDKIIEIWPRLEGVLKVIYYEPKGMRNYRQPYLADFP 156
Query: 318 ELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
+ ELGR E + L ++ L TSGT G K ML+H N+ A ++
Sbjct: 157 SIEELGRTYDREHPGLFEAELAAGKPDDVAILSTTSGTTGKPKLAMLTHRNMISQGAGLL 216
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +SFLPL+ + Q V + + M T+ F +
Sbjct: 217 SVDPL-GPDDEFVSFLPLAWVGEQMVTVAAGMQCGFTINFPE 257
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L R L+ +K +GL + + +G A + ++ R++ ++ + + +V+G +E AG
Sbjct: 331 YGLARLLVFEMLKDHLGLRFLKRAYTGGAALGPDVFRFYHAIGVNLKQVYGQTESAGLSV 390
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ K VG +P TQ +I + NGEI +K
Sbjct: 391 IHRDGQIKFQTVGTPLPNTQIRIAE-----NGEILVK 422
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY + ++RAN + A +I++F L + GEL T KV+R V ++YQ I+
Sbjct: 539 QVYALIRKDVERAN-ADLPPAARIRRFLLLHKELDADDGELTRTRKVRRRLVAQRYQEIV 597
Query: 481 DKFY 484
D Y
Sbjct: 598 DALY 601
>gi|417321242|ref|ZP_12107782.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
gi|328471922|gb|EGF42799.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
Length = 602
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ V T++ A L GL + I N P+W +D A+ G +Y TN+
Sbjct: 36 ITWEQFGQQVDTLSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDE 318
+ + +D + V + Q + + + QC +L+ IV D ISW +
Sbjct: 96 AAQSAYIIDNADVKVLFVGEQPQFDAAVSIFEQCEQLELIVAMSDDIELGDHDFAISWKD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ G + LD LE ++ TL+YTSGT G K VML + NI Q
Sbjct: 156 FVAKGDTSHQAELDERLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LSQGDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y+
Sbjct: 547 KELAKFEQVKKFKLLPRAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYN 596
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSK++ +G R G A + + R+F ++ I + +GM+E T+S DD
Sbjct: 331 LVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA--TISCWDD 387
Query: 175 --FKLDGVGRTIPGTQTKIVDPDE 196
F D +G ++PG Q KI + +E
Sbjct: 388 KCFDPDSIGMSMPGAQVKIGENNE 411
>gi|229490445|ref|ZP_04384286.1| long-chain-fatty-acid--CoA ligase [Rhodococcus erythropolis SK121]
gi|229322735|gb|EEN88515.1| long-chain-fatty-acid--CoA ligase [Rhodococcus erythropolis SK121]
Length = 603
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 8/257 (3%)
Query: 160 MSECAGAHTVSAPDDFK-LDGVGRTIPGTQTKIVDPDEEGNG--EICLKEYEANVRTVAK 216
M E + T + P+D +D V +V + GN ++ ++ A V VAK
Sbjct: 1 MPEFSAPQTFTIPEDASAVDSVFAFAKTKPAAVVYKRKVGNAWVDVTAGDFAAQVTAVAK 60
Query: 217 AFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANI 276
+ +G+E+ V ++ EW D AGG +Y T++ E L S+A
Sbjct: 61 GLIAIGVEQGDRVGLMSATRFEWPLVDYAIWAAGGVTVPIYETSAAEQVRWILEDSEAID 120
Query: 277 CVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLE 336
+VE+D + V A P L+ + Q + GV+ +EL LG DE + +
Sbjct: 121 LIVENDAHAATVKDVAAAAPALRTVYQIDAAAGGKGVV--EELTALGADISDEDVHARVA 178
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---FKLESAALSVISFLPLS 393
+ ++ TL+YTSGT G K L+H N+ + I+ L++ + + FLPL+
Sbjct: 179 ALKASDPATLIYTSGTTGRPKGCQLTHSNLIAESKGILDSNLGTLLKTPGVRTLMFLPLA 238
Query: 394 HIAAQTVDIYSVMTVAA 410
H+ A+ V I S AA
Sbjct: 239 HVLARAVSIASFDAGAA 255
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q AID AN K +S+A+ I+KF LP DFS TGEL PTMK+KR V + + + I+K Y
Sbjct: 545 QDAIDEAN-KLVSHAEAIKKFRILPVDFSEDTGELTPTMKLKRNVVHESFAADIEKIY 601
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G +C++++SG AP+ L +F + + I E +G++E A
Sbjct: 331 HALFDKLVYSKLRAALG-GQCQLAISGGAPLGARLGHFFRGIGVTIYEGYGLTETTAAFA 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
V+ K+ VG+ + G +I + +GEI L
Sbjct: 390 VNTIGAQKVGSVGKPLAGNSVRIAE-----DGEILL 420
>gi|257388283|ref|YP_003178056.1| AMP-dependent synthetase and ligase [Halomicrobium mukohataei DSM
12286]
gi|257170590|gb|ACV48349.1| AMP-dependent synthetase and ligase [Halomicrobium mukohataei DSM
12286]
Length = 660
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 11/226 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E ++ V +A F +LG++ V + EW SD A+ AGG +YT +S
Sbjct: 74 ITYDEMQSMVHNLAAGFRELGVDHDTRVGLFSSTRMEWALSDFAALAAGGIVTTVYTESS 133
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
P + L A+ VVE++ L+++L+V+ + + E D+ V + EL E
Sbjct: 134 PRQVKYLLSDPGADGVVVENEALLDRLLEVEDRLELSFIVTIDEYDTDRDDVYTLGELHE 193
Query: 322 LGRAAPDESLDRV-LETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
+G A D++ R LE + ++ +L+YTSGT G K V L+H N N + +
Sbjct: 194 IGAKAYDDARYRSWLEERSPSDLASLIYTSGTTGQPKGVKLTHRNFRSNVNQVYKRLAPR 253
Query: 381 ----------SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
S + ISFLPL+H+ + + + AT+ + +
Sbjct: 254 PDKDPDHPTLSPGTTSISFLPLAHVFERLAGHFVMFAAGATVGYVE 299
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S++K+ +G + +SG +S EL FL +D+ I E +G++E A +V+ P+D
Sbjct: 374 LVYSQLKENLGGN-IEFMVSGGGSLSKELCETFLGMDLTIVEGYGLTETAPVVSVNPPED 432
Query: 175 FKLDGVGRTIPGTQTK----IVDPDE 196
+ +G + + K +VD D+
Sbjct: 433 VRPGTMGVPVVDEEVKLDTHVVDQDD 458
>gi|153809226|ref|ZP_01961894.1| hypothetical protein BACCAC_03537 [Bacteroides caccae ATCC 43185]
gi|149128202|gb|EDM19422.1| AMP-binding enzyme [Bacteroides caccae ATCC 43185]
Length = 601
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++ VR A AF+ LG+E ++ I N PEWFY D GA Y T+S
Sbjct: 36 ISWNQFSGTVRQAANAFVALGVEEQENIGIFSQNKPEWFYVDFGAFANRAVTIPFYATSS 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWD 317
P + + + V + Q + + C L+ ++ ++ P I +D
Sbjct: 96 PAQAQYIINDAQIRYLFVGEQFQYDAAFSIFGFCSSLQQLIIFDRSVVKDPRDVSSIYFD 155
Query: 318 ELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E M +G P +++++ E + ++ ++YTSGT G K VML H +C ++
Sbjct: 156 EFMAMGEGLPHNDTVEARTERASYDDLANILYTSGTTGEPKGVMLHH-------SCYLEQ 208
Query: 377 FKLESAALSVIS-------FLPLSHI 395
F L+ +S FLPL+H+
Sbjct: 209 FHTHDDRLTTMSDKDVSMNFLPLTHV 234
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYT----YRLVRWLIL 117
W+KV +Q TTG+K+ + A H + YL + + P Y+ I
Sbjct: 278 WEKVYAGVQEKINETTGLKKALMLDAIKVGRIHNLDYLRRGKTPPVMNQLKYKFYEKTIY 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
S +K+ +G++ + A + E+ + S+ I + +G++E + + P + +
Sbjct: 338 SLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDI 397
Query: 178 DGVGRTIPGTQTKIVDPDE 196
VG +PG + KI + +E
Sbjct: 398 GSVGVVLPGVEVKIGEDNE 416
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ ++ ++I++F LP FS+ GEL T+K+KR V + Y +I+K Y+
Sbjct: 551 QQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRAVVAQNYSELIEKMYE 600
>gi|429748961|ref|ZP_19282118.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429169511|gb|EKY11261.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 599
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 5/212 (2%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
+++A L +G+ +V I+ N P+W +DL + + +YTTN+ E L+ + ++
Sbjct: 50 LSRALLGMGILAQDTVGILSQNMPQWTLTDLACLQIRAISVPIYTTNTAEQALYVMNHAE 109
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAPDES 330
+ V D+ Q K L+V +C L+ IV + K + + W + + LG +
Sbjct: 110 IKVLFVSDELQYNKALEVAERCASLQKIVVFNKKVALKEAKYSMHWADFLALGATDKQNA 169
Query: 331 -LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISF 389
L++ L ++ T++YTSGT G K VML+++N+ F + ++ + S + F
Sbjct: 170 VLEKRLAERNLDDLFTIIYTSGTTGQPKGVMLTYENLAFQMVGHSERLAVDDSD-SSLCF 228
Query: 390 LPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
LPLSH+ + + + + +D N ++
Sbjct: 229 LPLSHVFERAWTCFCLYKCVPVYYLSDTNKVR 260
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
TY L L+ SK+K+A+G R + G A + + R+F S+ I + +GM+E
Sbjct: 327 TYNLFDKLVYSKLKEALG-GRIKFMPCGGANLEPSIGRFFQSIGINVKLGYGMTETTATI 385
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
+ D F L VG +P Q +I + +E G + +K Y N AK F G R
Sbjct: 386 SCWGDDKFDLQSVGEVMPNVQIRIGEENEILVKGGMVMKGYYKNPEETAKVFTNDGYLR 444
>gi|305667354|ref|YP_003863641.1| putative long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
gi|88709402|gb|EAR01635.1| probable long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
Length = 590
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAA 254
NGE KEY +++ L++G+E+ + +I N EW D+G + G
Sbjct: 29 NGEWVATSTKEYIDKANAISRGLLRMGVEKNDKIAVISMTNRTEWNIVDIGVLQLGAQNV 88
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T S + L S A C V + L KI +K P LK + ++ G
Sbjct: 89 PIYPTISQSDYEYILNHSGAKYCFVSCVEVLAKINAIKKNVPTLKEVFSFD---TIDGCQ 145
Query: 315 SWDELMELGRAAPDESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+W+E+++ G + +++L + + + TL+YTSGT G K VMLSH+N+ N
Sbjct: 146 NWNEVLKTGEDSSNQNLVEESKNNVLPVDLATLIYTSGTTGRPKGVMLSHNNLVTNVIDS 205
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++ L + +SFLP+ H+ + + +Y ++FA+
Sbjct: 206 EKHVPLRNGNSKALSFLPVCHVFERMI-LYLYQYCGVEIYFAE 247
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 68 KKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLD 127
K VT TG+K+ I +A L+ Y Y +L R LI SK ++A+G
Sbjct: 277 KIVTKGSDLTGLKKAIFFWAVDVGLK-YEPYGANGWLYEQKLKLARKLIFSKWQEALG-G 334
Query: 128 RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIP 185
+ +SG+A + L R F + +PI E +G++E + +V+ + F++ VGR I
Sbjct: 335 NLELMVSGSAALQARLTRIFAAAGMPIMEGYGLTETSPVVSVNDQTNGGFRIGTVGRVID 394
Query: 186 GTQTKIVDPDEEGNGEICLK 205
+ KI D +GEI +K
Sbjct: 395 NVEVKIAD-----DGEILVK 409
>gi|383769125|ref|YP_005448188.1| putative fatty-acid--CoA ligase [Bradyrhizobium sp. S23321]
gi|381357246|dbj|BAL74076.1| putative fatty-acid--CoA ligase [Bradyrhizobium sp. S23321]
Length = 614
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E+ + +A A G + I+ PEW ++D+G + AGG ++G+Y T++
Sbjct: 46 REWLETSKEIAYALHATGFKPGEVASIVANAVPEWVHADMGILCAGGVSSGIYPTDASSQ 105
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDEL 319
+ + S + ED++QL+KIL +A+CP L I+ ++ G D V+S DE
Sbjct: 106 VEYLVNDSRTKVIFAEDEEQLDKILACRARCPSLHKIIVFDMEGLSGFSDDM-VMSLDEF 164
Query: 320 MELGR--AAPDESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
LGR E+L ++++ + + LVYTSGT G K M ++ ++T +
Sbjct: 165 RALGRNHMVGREALWQEMIDSRSAEDLAILVYTSGTTGPPKGAMHANRSVTHQMRHANDF 224
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +I FLPL H+A + Y + + + + FA+
Sbjct: 225 IPAQEDEDRLI-FLPLCHVAERIGGYYISVALGSVMNFAE 263
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 99 LEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVF 158
L ++ YR+ +++ +GLDRCR++ +GAAPI+ EL R++L+L I + EV+
Sbjct: 331 LSLRIANGIAYRIA----FRNIRRMIGLDRCRIAFTGAAPIAPELIRWYLALGIDVHEVY 386
Query: 159 GMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
G +E G T+ + KL VG +P + + PD GEI +K
Sbjct: 387 GQTENCGVATMMPAERIKLGSVGTAVPWGEVAL-SPD----GEILIK 428
>gi|345428592|ref|YP_004821708.1| hypothetical protein PARA_00020 [Haemophilus parainfluenzae T3T1]
gi|301154651|emb|CBW14110.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 605
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 20/300 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I ++ + ++ AFL ++ + I N W +D+ A+ +Y TN
Sbjct: 34 DISWNAFQQQLDQLSLAFLACNIQVQDKIAIFAHNMSRWTIADIAALQVRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q E+ L++ QCP+L+ IV + + + WD
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYEQALEIAHQCPQLQKIVAMKEQIQLTETTLSCYWD 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
EL++LG A + L ++ T++YTSGT G K VML ++N+
Sbjct: 154 ELIQLGAAEFQAEFETRLANKTMDDLFTIIYTSGTTGEPKGVMLDYNNLAHQLEAHDIAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYKATQAAIDR 432
+ +S +SFLP SHI + Y + A + D N ++ V A+ R
Sbjct: 214 DVNQDEVS-LSFLPFSHIFERAWVAYVLHRGAILCYLEDTNQVRETLTEVRPTFMCAVPR 272
Query: 433 ANLKSISNA-QKIQKFEFLPA---DFSIPTGE-----LGPTMKVKRPFVVKKYQSIIDKF 483
K S K+QK F+ ++I G+ L KV PF ++K ++ DK
Sbjct: 273 FYEKIYSAVLDKVQKAPFIRQMIFHWAIAVGQKRFELLSQNKKV--PFFLQKRYALADKL 330
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 34/49 (69%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FS+ GE+ PT+K++R ++++Y+ IID Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSVKLGEITPTLKLRRKVIMERYRHIIDSMY 594
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPY----TYRLVRWLILSKVKQAMGLDRCRVSLS 134
+++ I ++A + Q L +N P+ Y L L+LSK++ +G R ++
Sbjct: 291 IRQMIFHWAIAVG-QKRFELLSQNKKVPFFLQKRYALADKLVLSKLRSLLG-GRIKMMPC 348
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G A + + +F S+ I I +GM+E T+S DD F + +G+ +P + KI
Sbjct: 349 GGAKLEPTIGLFFHSIGINIKLGYGMTETTA--TISCWDDHHFNPNSIGKLMPNAEVKIG 406
Query: 193 DPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ +E G + +K Y A+AF + G
Sbjct: 407 ENNEILVRGGMVMKGYYKKPEETAQAFTEDGF 438
>gi|256820202|ref|YP_003141481.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
gi|256581785|gb|ACU92920.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
Length = 590
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
EY TV++ L+LG+E+ + +I N EW D+G + G +Y T + E
Sbjct: 39 EYIQKANTVSRGLLRLGIEKNDKIAVISSTNRTEWHVLDIGILQVGAQNVPIYPTINLED 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L S+ CVV D + EKI ++ + P LK I + D P W E+++LG
Sbjct: 99 FEYILNHSECKYCVVSDKELWEKISSIQDKLPHLKTIFTFN---DVPYAHHWQEILDLGA 155
Query: 325 AAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+++ ++ ++I ++ T++YTSGT K VMLSH NI N + +
Sbjct: 156 DEGNQAEVEARKDSIQKDDLATIIYTSGTTSRPKGVMLSHWNIISNILNCQDRLPITEGS 215
Query: 384 LSVISFLPLSHI 395
+ +SFLP+ H+
Sbjct: 216 -TALSFLPVCHV 226
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+KR + +A + Q Y Y + ++ R LI SK ++A+G R ++ +SG+A
Sbjct: 286 GIKRKLFFWALNLGFQ-YEPYGANGAWYQFKLKIARKLIFSKWREALG-GRIQMIVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+S L + F + + I E +G++E A V+ +K+ VG+ I + KI +
Sbjct: 344 ALSPRLAKVFSAAGLKIMEGYGLTETAPVIAVNRESGRFWKIGTVGKPIVNIEVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI +K
Sbjct: 402 ---DGEILVK 408
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
++++ F+F P +++I G L PT+K+KR + +KY I +KFY+
Sbjct: 546 EQVKLFDFTPDEWTIDGGHLTPTLKLKRRVIKEKYIDIYNKFYN 589
>gi|405373569|ref|ZP_11028309.1| Long-chain-fatty-acid--CoA ligase [Chondromyces apiculatus DSM 436]
gi|397087523|gb|EJJ18562.1| Long-chain-fatty-acid--CoA ligase [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 622
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ ++ +V+ ++ A + G++ V I + +W DL A +Y +N
Sbjct: 47 DVTFAQFLEDVKAMSAALVAQGVKPGDRVAIFANTSLQWLICDLAIGAAQAITVPIYASN 106
Query: 261 SPEACLHCLVTSDANICVVEDDK-------QLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+P+ C + L S+ ++ +++D+ +L +I + A+CP + +V +EG
Sbjct: 107 TPDECRYILNHSETSLVFIDNDEKDVRQPGRLTRIRQKLAECPSVAKLVLFEGPAAGGNE 166
Query: 314 ISWDELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
++ + + GR AA + D + ++ ++ L+YTSGT G K V+L+H N F A
Sbjct: 167 LALSDFVAQGRTEHAARPDDFDARVNAVSMDDTAALIYTSGTTGDPKGVILTHRNWAFEA 226
Query: 371 ACIIQYFKLESAALSVISFLPLSHIAAQTV 400
Q + + SV+ FLPL+H+ AQ V
Sbjct: 227 KA-AQSVGMMAPGDSVMLFLPLAHVFAQVV 255
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 109 YRLVRWLILSKVKQAMGLD---RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
+ L + L+ +KV+ A+ R+ +SG AP+S ++ +F L + + E +G++E +
Sbjct: 341 FALAKKLVFAKVRAAISEKLGGNMRLFISGGAPLSPKIGYFFDLLGLKVLEGYGLTETSA 400
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
TV+ K+ VG +PG +I +GEI ++
Sbjct: 401 GSTVNREHKIKIGTVGAPMPGLDVQIAS-----DGEILIR 435
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V+ A +AA+D+ N + + +++F L ADFS T EL P + VKR +KY++ +
Sbjct: 553 EVHAAVKAAVDQVNTQQPPYST-LKRFAVLEADFSQETEELTPKLSVKRKVCSQKYKAQL 611
Query: 481 DKFYD 485
D+ Y+
Sbjct: 612 DRMYE 616
>gi|448366535|ref|ZP_21554658.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
gi|445653990|gb|ELZ06846.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
Length = 680
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 19/254 (7%)
Query: 182 RTIPGTQTKIVDPDEEGNG--EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEW 239
R++ GT + V P E + I E VR +A F LG+E V I EW
Sbjct: 46 RSLTGTDSNAVLPPAEPDSFRAISYAEMRDIVRNLAAGFRDLGVESGDRVGIFSNTRMEW 105
Query: 240 FYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLK 299
+D + AG +YT++SP+ + L DA+ VVE+ + LE++L V+ + +L+
Sbjct: 106 AQTDFALLGAGAVVTTVYTSSSPDQVSYLLDDPDADGVVVENQELLERVLAVEDEL-ELE 164
Query: 300 AIVQYE-----GKPDKPGVISWDELMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTE 353
IV + D+ V++ EL + G A D E+ ++ A ++ +L+YTSGT
Sbjct: 165 FIVSIDELAGTAYDDRDDVLTLAELHDRGVAVFDAETYQEWVDDPAMDDLASLIYTSGTT 224
Query: 354 GASKPVMLSHDNITFNAACIIQYFK----------LESAALSVISFLPLSHIAAQTVDIY 403
G K V L+H N N I + F + A +S+LPL+H+ +T +
Sbjct: 225 GQPKGVRLTHGNFRANVNQIRKRFAPRPDRDADVPVIDAESQAMSYLPLAHVFERTAGHF 284
Query: 404 SVMTVAATLWFADK 417
+ A + +A+
Sbjct: 285 LLFASGACVAYAEN 298
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q +DRAN + + I++FE +P +F+ L PTMK KR ++ ++ +
Sbjct: 615 RVREYVQREVDRAN-EGFEKHETIKQFELVPVEFTEENEMLTPTMKKKRRVILDRFGDRV 673
Query: 481 DKFYD 485
D+ Y+
Sbjct: 674 DRIYE 678
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + +SG +S EL R + ++ +PI E +G++E + V+ PDD
Sbjct: 372 LVFSTVREALGGE-IESLISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVIAVNPPDD 430
Query: 175 FKLDGVGRTIPGTQTKI 191
++ +G T+ I
Sbjct: 431 PRIGTIGPTLSDVDISI 447
>gi|257464767|ref|ZP_05629138.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus minor
202]
gi|257450427|gb|EEV24470.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus minor
202]
Length = 588
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 6/225 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ V +++A L G+ V I N P W +DL + +Y TN
Sbjct: 34 DISWQAFQNQVDELSQALLAYGVNVQDRVAIFAQNMPNWTITDLAVLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISW 316
+ + L S+A I V D +QL+ +L + CP L+ IV KP D P VI W
Sbjct: 94 NANQTAYVLNHSEAKIIFVGDQEQLDVVLSIAENCPHLEKIVLM--KPNLSADNPRVIRW 151
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
D+L + L L + ++ T++YTSGT G K VML NI
Sbjct: 152 DDLQAVKNRDFSAILAERLAERSLSDLFTILYTSGTTGEPKGVMLDFANIAHQLTAHDLA 211
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
S +SFLP SHI + Y + A + + N ++
Sbjct: 212 LPHIDEKDSSLSFLPFSHIFERAWVAYMLHRGATICYLENTNEVR 256
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 91 SLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSL 150
+L H+ + + + ++L L+LSK++ +G R+ G A + + +F ++
Sbjct: 294 ALFHWAIRTAQKGRKGFAFKLADKLVLSKLRALLG-GNIRMMPCGGAKLEPAIGAFFQAI 352
Query: 151 DIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEA 209
I I +GM+E + D F + +G+ +P + +I + +E G + ++ Y
Sbjct: 353 GINIKLGYGMTETTATVSCWEADGFNVKSIGKLMPNAEVRIGENNEILVRGGMVMRGYYK 412
Query: 210 NVRTVAKAFLKLGL 223
A AF + G
Sbjct: 413 KPEETASAFTEDGF 426
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF LP FS E+ PT+K++R ++++Y+ I+ Y
Sbjct: 534 KELAHFEQVKKFTLLPQAFSTKFEEITPTLKLRRKVIMERYRHYIEAMY 582
>gi|365089203|ref|ZP_09328174.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
gi|363416902|gb|EHL23998.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
Length = 618
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A + LG I+ EW +DL + GG A G+Y T++ +
Sbjct: 60 VREIAGGLMSLGFAPGECASILSNTNIEWVLADLAVLSCGGVANGIYPTDAAAQVHYLSE 119
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGRA- 325
S + VEDD+QL+K L+V+ P L+ V ++ + + P V+S L ELGR
Sbjct: 120 DSRTTVLFVEDDEQLDKALEVRNNLPLLRKAVVFDMEGLRSLNDPDVLSLASLRELGRTW 179
Query: 326 ---APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL--E 380
PD + RV + + LVYTSGT G K M +H +T+ + Y L
Sbjct: 180 NAQHPDALMQRV-KACRPEDLAILVYTSGTTGKPKGAMHTHGALTY---TVRGYNTLISR 235
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
S A + FLPL HIA + Y + A L F +
Sbjct: 236 SEADETMCFLPLCHIAERMGGEYFSLYTGARLNFVEN 272
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L R+L L+ V++ +G+ R R ++GAAPIS +L +++L+L +P+ EV+GM+E GA T
Sbjct: 345 FMLARFLALNNVRKLIGIHRARFLVTGAAPISPDLVKWYLALGVPMLEVWGMTETCGAST 404
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K +G + +I DP GEI ++
Sbjct: 405 GVPASRIKPGSIGPAASYNEVRI-DP---ATGEILVR 437
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + QA IDR N K + ++I+KF L + EL PTMK+KR V +KY I
Sbjct: 555 EVQELIQAEIDRVNAK-FARVEQIKKFFLLDTQLTAEDEELTPTMKLKRKLVQQKYAPQI 613
Query: 481 DKFY 484
+ Y
Sbjct: 614 EAMY 617
>gi|344999164|ref|YP_004802018.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
gi|344314790|gb|AEN09478.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
Length = 598
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ ++ A V AK + G+E V ++ EW D AG +Y T+
Sbjct: 45 DVTATQFLAEVSNTAKGLIAAGIEPGDRVALMSRTRFEWVLLDFAIWSAGAVTVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A +VE D + V+ + P L+ + Q DK V EL
Sbjct: 105 SPEQVQWILGDSGAVAALVESDTHAASVTAVRDRLPDLRHLWQI----DKGAV---GELA 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
E G DE+LD + + ++ TLVYTSGT G K +L+H + +++ K
Sbjct: 158 EGGAGVSDETLDLRMRSAKADDPATLVYTSGTTGRPKGCVLTHRSFFAECGNVVERLKPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLP +H+ + V++ SVM
Sbjct: 218 FRTGECSVLLFLPTAHVFGRLVEVASVM 245
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 31/206 (15%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ +G R ++SG AP+ L +F + + E +G++E A + D
Sbjct: 332 LVFGKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATAFNPWDR 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ +PG+ +I D E +GE Y N A+A
Sbjct: 391 QKIGTVGQPLPGSVVRIADDGEVLLHGEHLFTGYWQNEAATAEAL--------------- 435
Query: 234 FNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVK 292
A WF++ D+G + G+ A T + + + V+ED +++
Sbjct: 436 --ADGWFHTGDIGTLDEDGYLA---ITGRKKEIIVTAGGKNVAPAVIED--------RIR 482
Query: 293 AQCPKLKAIVQYEGKPDKPGVISWDE 318
+ +V +G+P +I+ DE
Sbjct: 483 GHALVAECMVVGDGRPFVGALITLDE 508
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q A+D N ++S A+ ++KF L + F+ G + P++K+KR V K + ++ Y
Sbjct: 540 QRAVDDGN-AAVSKAESVRKFRILASQFTEEAGHITPSLKLKRNVVAKDFADEVESIY 596
>gi|397733771|ref|ZP_10500484.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396930291|gb|EJI97487.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 616
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 7/199 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E VR +A + LG++ V + EW +DL + AG +Y T +
Sbjct: 54 VTWSEAGDRVRNLAAGLIVLGVQAEQRVALASATRYEWVLADLAVMCAGAATTTVYPTTT 113
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-DKPGVISWDELM 320
+ + S + + EDD QL K+ + + + ++ +V +G P D VI++D+L
Sbjct: 114 AGDVAYIVANSGSRVVFAEDDAQLAKLRENRGELGDVEKVVLIDGDPGDDDWVITFDQLH 173
Query: 321 ELGR----AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
+LG PD DR+ E IA ++ TL+YTSGT G K V LSH T+ AA I
Sbjct: 174 DLGEELLAETPDAVHDRI-EAIAPDDLATLIYTSGTTGRPKGVRLSHSAWTYEAAAIDAT 232
Query: 377 FKLESAALSVISFLPLSHI 395
L++ L + +LPLSH+
Sbjct: 233 GILDADDLQYL-WLPLSHV 250
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK+++ G R + +SG+A ++ ++ ++F ++ I + E +G+SE + A V+ P
Sbjct: 350 LVYSKIRERFG-GRLKFFISGSAALNRDVAQWFDAVGIVVLEGYGLSETSAASFVNRPSA 408
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ VG IPGT+T+I + +GEI +K
Sbjct: 409 YRFGTVGWPIPGTETRIGE-----DGEILIK 434
>gi|85819007|gb|EAQ40166.1| long-chain-fatty-acid-CoA ligase [Dokdonia donghaensis MED134]
Length = 592
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 11/224 (4%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAA 254
NGE +EY ++ L+LG++ + +I N EW D+G + G
Sbjct: 31 NGEWIKTSTQEYIDKANAFSRGLLRLGVKPNDKIAVISMTNRTEWHICDVGILQIGAQNV 90
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
MY T S E + L S++ V + L K+ + + + P L+ + ++ D G
Sbjct: 91 PMYPTISAEDYAYVLNHSESKYVFVSCTETLAKVREAQDKVPSLQGVYSFD---DIDGCD 147
Query: 315 SWDELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+W ++++ G ++ + +++++ T++ TL+YTSGT G K VMLSH NI NA
Sbjct: 148 NWQKVLDQGADDSNQPEVQALMDSVKTDDLATLIYTSGTTGRPKGVMLSHRNIVSNAISS 207
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVD-IYSVMTVAATLWFAD 416
+ + +SFLP+ HI + + +Y +VA ++FA+
Sbjct: 208 TERVPTAGEGVKALSFLPICHIYERMITYLYQYNSVA--IYFAE 249
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + +A L+ Y Y + + R LI SK ++A+G +V SG+
Sbjct: 288 TGIKKKLFFWAVDVGLE-YEPYGKNGWLYERKLAIARKLIFSKWQEALG-GNLKVIASGS 345
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVS--APDDFKLDGVGRTIPGTQTKIVDP 194
A + L R + + + + E +G++E + +V+ +F++ VG+ I G + KI +
Sbjct: 346 AALQPRLARIYNAAQMGVMEGYGLTETSPVCSVNDMRGGNFRIGTVGKLIKGVEVKIAE- 404
Query: 195 DEEGNGEICLK 205
+GEI +K
Sbjct: 405 ----DGEILVK 411
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +D AN +S + +K++ F P +++ +G L PTMK+KR + + Y + + Y
Sbjct: 534 QKEVDEAN-ESFAKWEKVKAFRLTPDAWTVESGHLTPTMKLKRKIIKENYVHLYNDIY 590
>gi|409721734|ref|ZP_11269892.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|448722240|ref|ZP_21704778.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|445789951|gb|EMA40624.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
Length = 643
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 14/229 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E VR +A F +LG+E V + EW +D G + AGG +YT++
Sbjct: 63 DLTYDEMRGIVRNLATGFRELGVEAGDRVGLFSNTRMEWAQADFGLLAAGGVVTTVYTSS 122
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWD 317
SP + L A VVE+ + L+++L+V+A L+ IV +EG D+ V++
Sbjct: 123 SPRQVEYLLSDPGATGVVVENGELLDRVLEVEAAL-DLEFIVSIDDFEGYDDRDDVLTLA 181
Query: 318 ELMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E+ + G AA D E+ + +LVYTSGT G K V LSH N N + +
Sbjct: 182 EVHDRGAAAFDAEAYESWFVGRDPEALASLVYTSGTTGRPKGVKLSHRNFRANVDQVYRR 241
Query: 377 F-----KLESAAL----SVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
F K ++ + + +SFLPL+H+ + + +T+ +A+
Sbjct: 242 FGPRPDKGDTPTIGPGSTSLSFLPLAHVFERLAGHFMQFAAGSTVAYAE 290
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ S+V++ +G + +SG +S +L R F ++ +PI E +G++E A
Sbjct: 359 HALADRLVFSQVREGVGGN-IDFFISGGGSLSPDLARLFHAMGLPILEGYGLTETAPVVA 417
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI------VDPDEEGN-GEICLK 205
V+ P+ ++ +G + + ++ D D EG GE+ +K
Sbjct: 418 VNPPEAPEIGTIGYPVHDEEVRVDSTVVPNDFDAEGEVGELLVK 461
>gi|119025742|ref|YP_909587.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium adolescentis ATCC
15703]
gi|154487436|ref|ZP_02028843.1| hypothetical protein BIFADO_01288 [Bifidobacterium adolescentis
L2-32]
gi|118765326|dbj|BAF39505.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium adolescentis ATCC
15703]
gi|154083954|gb|EDN82999.1| AMP-binding enzyme [Bifidobacterium adolescentis L2-32]
Length = 678
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
E A++R VAK L GL++ V + + +W D + GG A +Y T+S E
Sbjct: 124 NETLADIRAVAKGLLHYGLKKGDGVAFMCRTSYDWDVFDAAVMACGGVLATIYDTDSAEQ 183
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + VVE K + +CP L+ IV +E DE+ G
Sbjct: 184 IRNIVNNSDARLLVVETTDMKAKADGAETECPTLEHIVCFE-------TGGLDEIKAYGS 236
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
DE+LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 237 GVSDEALDARIDSVQKTDLCSIVYTSGSTAAPKGVEMTHEHYCATAFNLPDYMPELLHDK 296
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMT 407
+V+ FLP +H A+ ++ V +
Sbjct: 297 KNTVLLFLPQAHSFARAINYICVAS 321
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V Q +D+AN + +S A+ ++KF LP +F+ G + +MKV RP V+K+Y ++++
Sbjct: 612 VRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPKVIKRYATLLN 670
>gi|386839701|ref|YP_006244759.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374100002|gb|AEY88886.1| acyl-CoA synthetase, long-chain fatty acid:CoA ligase [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451792995|gb|AGF63044.1| acyl-CoA synthetase, long-chain fatty acid:CoA ligase [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 598
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E+ A VRT AK + G++ V ++ EW D AG +Y T+
Sbjct: 45 DVTAREFLAEVRTAAKGLIASGVQPGDRVGLMSRTRYEWTLLDFAIWSAGAITVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A CVVE D + + V+ P LK + Q E GV EL
Sbjct: 105 SPEQVQWILSDSGATACVVELDNHMAAVEAVRESLPALKHVWQIEAG----GVA---ELG 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
LG+ D +++ ++ T+VYTSGT G K +L+H + +++ +
Sbjct: 158 RLGQDVSDATVEERSSLAKADDPATIVYTSGTTGRPKGCVLTHRSFFAECGNVVERLRPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLPL+H+ + V + +M
Sbjct: 218 FRTGECSVLLFLPLAHVFGRLVQVAPMM 245
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ +G R ++SG AP+ L +F + + E +G++E A + D
Sbjct: 332 LVYSKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATAFNPWDR 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ +PG+ +I D E +GE KEY N A+A
Sbjct: 391 QKIGTVGQPLPGSVVRIADDGEVLLHGEHLFKEYWNNPGATAEAL--------------- 435
Query: 234 FNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVK 292
A WF++ D+G + G+ + T + + + V+ED +++
Sbjct: 436 --ADGWFHTGDIGTLDEDGY---LRITGRKKEIIVTAGGKNVAPAVIED--------RIR 482
Query: 293 AQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
A + +V +G+P +++ DE LGR
Sbjct: 483 AHALVAECMVVGDGRPFVGALVTIDEEF-LGR 513
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 417 KNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKY 476
K+ + A Q A+D N ++S A+ ++KF LP+ F+ +G L P++K+KR V K Y
Sbjct: 530 KDDPDLLAAIQDAVDDGN-AAVSKAESVRKFRILPSQFTEESGHLTPSLKLKRNVVAKDY 588
Query: 477 QSIIDKFY 484
+ I+ Y
Sbjct: 589 SAEIEAIY 596
>gi|421731485|ref|ZP_16170608.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407073698|gb|EKE46688.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 546
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDRLCRQTAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPELKTCEHGRLRSKRYPFLRTVLYIGDKS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ WD L++ G A D +LD ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 PPGMHRWDSLLKEGEALTDAALDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S+ I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSSDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|340622356|ref|YP_004740808.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
gi|339902622|gb|AEK23701.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
Length = 597
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 213 TVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTS 272
T++KA L G++ +V I N P+W +DL + +Y TN+ E + +
Sbjct: 47 TLSKALLAFGIQPQDTVGIFSQNMPQWTIADLATLQIRAITVPIYATNTAEQAAFVVNHA 106
Query: 273 DANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELGRAAP-D 328
+ + V ++Q +K L + P L+ I+ + +K I+W++ ++ G +A D
Sbjct: 107 EIKMLFVGGEEQYDKALAFAEKSPSLQKIILMKDNIPLKEKQWSITWEDFIKYGASAKLD 166
Query: 329 ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVIS 388
L +E + N+ T++YTSGT G K VML ++N+ KL S +S ++
Sbjct: 167 AQLQTQIENRSLNDLFTIIYTSGTTGDPKGVMLDYENLAHQLKNHDIRLKLSSEDVS-LA 225
Query: 389 FLPLSHIAAQTVDIYSV 405
FLPLSH+ + YS+
Sbjct: 226 FLPLSHVFERAWTFYSL 242
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y++ L+ SK+KQ++G R R G A + + R+F ++ + + +GM+E T
Sbjct: 326 YQISEKLVFSKLKQSLG-GRIRFMPCGGANLEPSIGRFFQAIGVNVKLGYGMTETLA--T 382
Query: 169 VSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKA-----FLK 220
VS DD F L VGR +P TQ KI + +E G + +K Y N KA FLK
Sbjct: 383 VSCWDDIDFNLKSVGRLMPDTQMKIGEDNEILVKGGMVMKGYYKNPEETQKAFTQDGFLK 442
Query: 221 LG----LERYHSVCI 231
G L++Y++V I
Sbjct: 443 TGDAGNLDKYNNVFI 457
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K + + +KI++F LP FSI E+ PT+K+KR + +Y+ I+ Y+
Sbjct: 548 KDLPDYEKIKRFTLLPKAFSIDRNEITPTLKLKRKVIYVRYRKEIEAMYN 597
>gi|194333847|ref|YP_002015707.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
gi|194311665|gb|ACF46060.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
Length = 607
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Query: 217 AFLK-LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDAN 275
AFLK G+E V I+ N P W+ +D+ + G +Y + P + L S +
Sbjct: 56 AFLKDKGIEPGDRVAILSENRPGWYLADMAILSIGAIDVPLYPSLPPNQIEYILKDSGSK 115
Query: 276 ICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKP--GVISWDELMELGRAAPDESLDR 333
+ +V + QL KI+ V P+L +I+ + ++P GVI E + G+ E+ D
Sbjct: 116 VIIVSNMLQLGKIISVWQDLPELDSIIVM-NRLEEPEEGVIELSEAKKRGKKILAETPDF 174
Query: 334 V-LETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPL 392
V + I ++ T++YTSGT G K VML+H NI N +L+ + S +SFLPL
Sbjct: 175 VSYQMIKPDDIATIIYTSGTTGVPKGVMLTHRNICENIKSCSTIIRLDESDRS-LSFLPL 233
Query: 393 SHIAAQTVDIYSVMTVAATLWFAD 416
SH +T Y + A ++ A+
Sbjct: 234 SHAYERTGGYYLLFACGAAIYLAE 257
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYT--YRLVRWLILSKVKQAMGLDRCRVSLSGA 136
VK+ I N+A ST +Q++ + + +S T +++ L+ K+ Q G R +SG
Sbjct: 298 VKQKIFNWACSTGMQYHKSSEKGKISPTLTLQHKVAEKLVYHKISQKFG-GSLRFFVSGG 356
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
A + ++ +F L I I E FG++E + V+ P++ K VG + + I
Sbjct: 357 AALPQKVGEFFQGLGITILEGFGLTETSPVTNVNRPENVKFGTVGPVVNNVEISIA---- 412
Query: 197 EGNGEICLK 205
+GEI +
Sbjct: 413 -SDGEILFR 420
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 28/125 (22%)
Query: 387 ISFLPLSHIAAQTVDIYSVMTVA------ATLWFADKNALKVYKATQAAIDRAN------ 434
I+ LP+ H+ A++ + VM V L + N LK Y A + I A+
Sbjct: 476 IAPLPIEHLIAESPYVDQVMVVGEKRPFLTALIVPNYNELKNY-AEENDISSASGSELLK 534
Query: 435 -----------LKSISNA----QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
L+++S +K++KF +P FSI G+L PT+K+KR + K++
Sbjct: 535 DKQINKLFENLLRTVSRQLATHEKVRKFLLIPEQFSIENGQLTPTLKLKRRAISSKFEKE 594
Query: 480 IDKFY 484
I+ Y
Sbjct: 595 INSLY 599
>gi|448544962|ref|ZP_21625775.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|448547339|ref|ZP_21626817.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|448556217|ref|ZP_21631942.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
gi|445704740|gb|ELZ56649.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|445716350|gb|ELZ68094.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|445716969|gb|ELZ68698.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
Length = 666
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 15/215 (6%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD + G + E VR +A F LG+E V ++ EW +D + AGG
Sbjct: 58 PDGDYAG-LTYDEMRGIVRRLAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLGAGGVV 116
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDK 310
+YT++S + L A+ VVE++ LE++L V+ + L+ IV +Y+G D+
Sbjct: 117 TTVYTSSSERQTQYLLSDPGADAVVVENEALLERVLAVEDEL-DLRFIVVVDEYDGYDDR 175
Query: 311 PGVISWDELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
V++ EL G A DE + + L+ T++ +L+YTSGT G K V L+H N N
Sbjct: 176 EDVLTLGELYRRGEEAYDEAAYESWLDERDTDDLASLIYTSGTTGQPKGVRLTHWNFRSN 235
Query: 370 AACIIQYF-----KLESAALS----VISFLPLSHI 395
+ F K ++ + +SFLPL+H+
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDSVALSFLPLAHV 270
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ +A +D AN ++ + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEAEVDAAN-ENFESYERIKQFRVVPEEFSEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
YD
Sbjct: 645 SLIYD 649
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ +V+ A+G + +SG +S EL + ++ +PI E +G++E + +
Sbjct: 360 HRLADRLVFGQVRDALGGN-LDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P+ K+ +G + +TK+
Sbjct: 419 VNPPEAPKIGTIGYPLRNVETKL 441
>gi|365959138|ref|YP_004940705.1| long-chain-fatty-acid--CoA ligase [Flavobacterium columnare ATCC
49512]
gi|365735819|gb|AEW84912.1| long-chain-fatty-acid--CoA ligase [Flavobacterium columnare ATCC
49512]
Length = 590
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY V++A + +G+++ + II N EW D+G + G +Y T S +
Sbjct: 38 QEYLDRANAVSRALIAMGVQKDDKIAIISSNNRTEWNIMDIGVLQIGAQTVPIYPTISEQ 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S++ C V D + L K+ +KA L A+ ++ + G +W +L+ +G
Sbjct: 98 DYEYILNHSESKYCFVSDKEVLRKLNSIKANLSNLVAVFTFD---EISGEKNWADLLTIG 154
Query: 324 RAAPDESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+ ++ + + ++ T++YTSGT G K VMLSH+NI N L +
Sbjct: 155 KDTRTQNFVEERKNNVKPSDLATIIYTSGTTGKPKGVMLSHNNIVSNVLNSSDRIPLVAG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ HI + + +Y + +++FA+
Sbjct: 215 QAKAMSFLPICHIFERVI-LYIYQYYSISIYFAE 247
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ TG+K+ I +A L+ Y Y + + ++ R LI SK ++ +G ++ +S
Sbjct: 284 ELTGIKKKIFFWAVELGLK-YEPYGKNGWWYEFQLKIARKLIFSKWQEGLG-GNVKLMVS 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+A + T L R F + +P+ E +G++E + +V+ + F++ VG+ I + KI
Sbjct: 342 GSAALQTRLTRVFSAAGMPVMEGYGLTETSPVISVNDMRNGLFRIGTVGKPIKNVEVKIG 401
Query: 193 DPDEEGNGEICLK 205
+ +GEI K
Sbjct: 402 E-----DGEILFK 409
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K I+ N K N ++++KFE P +SI G+L PT+K+KR V++KY+ +
Sbjct: 527 EVIKRIYQEINHFNAK-FGNWEQVKKFELTPDVWSIDGGQLTPTLKLKRKVVLEKYKELY 585
Query: 481 DKFY 484
K Y
Sbjct: 586 AKIY 589
>gi|423348965|ref|ZP_17326621.1| hypothetical protein HMPREF9156_00159 [Scardovia wiggsiae F0424]
gi|393703194|gb|EJD65395.1| hypothetical protein HMPREF9156_00159 [Scardovia wiggsiae F0424]
Length = 615
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NGE +E+ V +VAK L G + ++ I+ EW D GG
Sbjct: 42 NGEWQYFTAEEFRTKVISVAKGLLARGFRKGEAIAILARTRWEWTCLDTAITSIGGVVVP 101
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS 315
+Y T+SP + + S + E+D+QL K V +CP L+AI + D +I
Sbjct: 102 IYETDSPAQIKYIVNDSHVRYVIAENDEQLHKASTVADECPSLEAIFVID--TDGDSII- 158
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
D L E G+ DE ++ ++ T+VYTSG+ G K + L+H N F A Q
Sbjct: 159 -DILEEFGKGKTDEDFWAAENNVSGSDLATIVYTSGSTGTPKGIELTHSNFVFVARSGDQ 217
Query: 376 YFK---LESAALSVISFLPLSHIAAQTVDIYS 404
K ++ FLPL+H+ A+ + +S
Sbjct: 218 SVKEIGHAEGGSRLLLFLPLAHVFARFMQYFS 249
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+ S++ G R R ++SG AP+ T++ +F + +PI E +GM+E TV+ + +
Sbjct: 339 VYSQIMDVFG-GRVRYAISGGAPLDTDITHFFNGIGLPILEGYGMTETCAPATVNPAEGY 397
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG + I D +GEIC+K
Sbjct: 398 KIGTVGLPLEDISIGITD-----DGEICIK 422
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
A+D+AN + +S A+ I+KFE +P S G L ++K+KR + Y+ +ID
Sbjct: 548 AVDKANTQ-VSRAESIRKFEIIPDTISQDNGMLTASLKIKRAVITDHYRKLID 599
>gi|378696081|ref|YP_005178039.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
gi|301168604|emb|CBW28193.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
Length = 599
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 133/309 (43%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A + L + L ++ T++YTSGT G K VML + N++
Sbjct: 154 SFIKTGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLS---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKDIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|153004394|ref|YP_001378719.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. Fw109-5]
gi|152027967|gb|ABS25735.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. Fw109-5]
Length = 605
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 212 RTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVT 271
R V+ +GL V IIG EW +DLG + A G +Y +N P + L
Sbjct: 56 RDVSDGLAAIGLRPGDRVAIIGETNLEWILADLGVLGAAGITVTIYQSNKPAEFQYILAD 115
Query: 272 SDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG----RAAP 327
+ A + D Q+ KI +V+ + P L+ I++ G P + +L G RA P
Sbjct: 116 AGARFVFCDTDVQVAKIREVRGKLPALEGIIRATGTAADPFERTLADLERAGAEWRRANP 175
Query: 328 DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVI 387
D RV + ++ + +YTSGT G K V+L+H N + + Q + L V+
Sbjct: 176 DAHAARV-AALGPDDPASFIYTSGTTGNPKGVVLTHGNWVYEGYAVEQIDLIGPNDL-VL 233
Query: 388 SFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRAN 434
FLP++H A+ ++ +WFA ++ + +D A+
Sbjct: 234 MFLPMAHSFAKVIE---------AVWFATGATCAFVESLEKILDNAS 271
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 419 ALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 478
A +V Q AID N K S + I++F +P DF+ +GEL PT+KVKR V + Y++
Sbjct: 539 APQVRAQIQKAIDALNAKQASYST-IKRFAIVPRDFTQESGELTPTLKVKRKVVTQNYRT 597
Query: 479 IIDKFY 484
++D FY
Sbjct: 598 LLDSFY 603
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 70 VTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGL--- 126
V+ L T G+K + A + Q+ A + + + + + L+ K+ A+
Sbjct: 293 VSKGLSTPGLKGKLFQLAMESFDQYATAADQGKPYSSFGFLVGKKLVFPKLTHALNERFG 352
Query: 127 DRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPG 186
R R+ +SG AP+S ++ +F L I E +G++E + V+ P ++ VG +PG
Sbjct: 353 GRMRLFVSGGAPLSPKIAHFFDVLGFTILEGYGLTESSAGTFVNRPGRNRIGTVGPPVPG 412
Query: 187 TQTKIVDPDEEGNGEICLK 205
T+ +I + +GE+ L+
Sbjct: 413 TEVRIAE-----DGEVLLR 426
>gi|386322121|ref|YP_006018283.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-GD]
gi|416111912|ref|ZP_11592936.1| Long-chain-fatty-acid--CoA ligase [Riemerella anatipestifer RA-YM]
gi|442314917|ref|YP_007356220.1| hypothetical protein G148_1222 [Riemerella anatipestifer RA-CH-2]
gi|315022208|gb|EFT35236.1| Long-chain-fatty-acid--CoA ligase [Riemerella anatipestifer RA-YM]
gi|325336664|gb|ADZ12938.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-GD]
gi|441483840|gb|AGC40526.1| hypothetical protein G148_1222 [Riemerella anatipestifer RA-CH-2]
Length = 594
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 15/211 (7%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNA-PEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTS 272
+++ LKLG++ + +I N EW DLG G +Y T S E ++ +
Sbjct: 46 ISRGLLKLGIKPGDKISLISTNNRTEWAVMDLGISQIGTVTVPVYPTISVEDYIYIFNNA 105
Query: 273 DANICVVEDDKQLEKILKVKAQCPKLKAIVQY---EGKPDKPGVISWDELMELGR-AAPD 328
+ C V D + +K+L V+ P L I + EG P+ W E+++LG A
Sbjct: 106 EIKYCFVSDKELYQKLLSVQPSVPSLVGIFTFDKVEGAPN------WAEILDLGEDEATQ 159
Query: 329 ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC---IIQYFKLESAALS 385
++ + + I T++ +++YTSGT G K VML+H NI N I+ K ++ L
Sbjct: 160 IEVEDLKKGIKTDDLASIIYTSGTTGRPKGVMLTHQNIVSNVLTCTPILSEKKPQNTNLK 219
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ HI + + Y + +++FA+
Sbjct: 220 SLSFLPICHIFERML-FYFYINSGISIYFAE 249
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K ++ +G + + +SG+A ++ L R F + I I E +G++E + V+ +
Sbjct: 322 LVFKKWREGLGGNIITL-ISGSAALAPRLNRMFQNAGISILEGYGLTETSPVIAVNTFNK 380
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG +P KI +G+GEI +K
Sbjct: 381 MKVGTVGPVLPNLDVKI-----QGDGEISVK 406
>gi|111020733|ref|YP_703705.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110820263|gb|ABG95547.1| probable long-chain-fatty-acid--CoA ligase [Rhodococcus jostii
RHA1]
Length = 616
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 7/199 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E VR +A + LG++ V + EW +DL + AG +Y T +
Sbjct: 54 VTWSEAGDRVRNLAAGLIVLGVQAEQRVALASATRYEWVLADLAVMCAGAATTTVYPTTT 113
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-DKPGVISWDELM 320
+ + S + + EDD QL K+ + + + ++ +V +G P D VI++D+L
Sbjct: 114 AGDVAYIVANSGSRVVFAEDDAQLAKLRENRGELGDVEKVVLIDGDPGDDDWVITFDQLN 173
Query: 321 ELGR----AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
+LG PD DR+ E IA ++ TL+YTSGT G K V LSH T+ AA I
Sbjct: 174 DLGEELLAETPDAVHDRI-EAIAPDDLATLIYTSGTTGRPKGVRLSHSAWTYEAAAIDAT 232
Query: 377 FKLESAALSVISFLPLSHI 395
L++ L + +LPLSH+
Sbjct: 233 GILDADDLQYL-WLPLSHV 250
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK+++ G R + +SG+A ++ ++ ++F ++ I + E +G+SE + A V+ P
Sbjct: 350 LVYSKIRERFG-GRLKFFISGSAALNRDVAQWFDAVGIVVLEGYGLSETSAASFVNRPSA 408
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ VG IPGT+T+I D +GEI +K
Sbjct: 409 YRFGTVGWPIPGTETRIGD-----DGEILIK 434
>gi|33592236|ref|NP_879880.1| long-chain fatty-acid--CoA ligase [Bordetella pertussis Tohama I]
gi|384203539|ref|YP_005589278.1| putative long-chain fatty-acid--CoA ligase [Bordetella pertussis
CS]
gi|33571881|emb|CAE41397.1| putative long-chain fatty-acid--CoA ligase [Bordetella pertussis
Tohama I]
gi|332381653|gb|AEE66500.1| putative long-chain fatty-acid--CoA ligase [Bordetella pertussis
CS]
Length = 621
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA GLE V II N EW + +GA G G+Y T+ + L ++
Sbjct: 63 VALGLRAAGLEPGGKVAIIAENRLEWLLAQMGAGVLGAVPVGVYCTSPAAEVGYVLEHAE 122
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDELMELGR-- 324
++ V ED +Q +K+L+V A+ P L+ IV E K ++ +IS+ EL G
Sbjct: 123 VDMVVCEDQEQTDKVLEVAARLPGLRRIVVMETKGLRNHAEAERARMISFAELEARGAQC 182
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
AA L++ L+ ++ ++YTSG+ G K VM+S+ N+ A I +++ +
Sbjct: 183 GAAEQARLEQALDAQTLDDVGLMIYTSGSTGKPKGVMISYRNMRGVAPGIADRLDMDAGS 242
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL H+A Q + + + + + + F +
Sbjct: 243 VH-LSYLPLCHVAEQMLSTFVPVYLGSQVNFGE 274
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 25/174 (14%)
Query: 67 WKK----VTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVR-W---LI 116
W+K ++ K+Q +G ++RW+ YA++ L+ +LE + + + RLV W LI
Sbjct: 298 WEKLHAAISIKMQESGRLRRWL--YARA--LRGCAPFLELSRARYGWRERLVYGWHYALI 353
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L + +GL R +V+++GAAPI E+ RYF +L IP+ EV+G++E G PD +
Sbjct: 354 LRALHNFVGLRRVKVAMTGAAPIPPEVLRYFRTLGIPLIEVYGLTESTGMIFGQHPDRVR 413
Query: 177 LDGVGRTIPGTQTKIVDPDEEG----NGEICLKEY----EANVRTVAKAFLKLG 222
+ VG G Q ++ E+G GE+ Y +A+ TV +L G
Sbjct: 414 VGTVGEPTLGVQARV---GEQGELLVRGEMVFHGYYRNPQASADTVCDGWLHTG 464
>gi|163788940|ref|ZP_02183385.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Flavobacteriales bacterium ALC-1]
gi|159876177|gb|EDP70236.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Flavobacteriales bacterium ALC-1]
Length = 591
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 8/218 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+ KEY V++A LKLG+++ + II N EW D+G + G +Y T
Sbjct: 35 MSTKEYLDKANAVSRALLKLGIQKNDKIAIISSTNRTEWNIMDIGILQTGAQNIPVYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
E + L S + C V D++ LEK+ KV+A +K + + D + EL
Sbjct: 95 CAEDYEYVLNHSGSIYCFVSDEEVLEKVRKVQANT-SIKDVYSFNHIED---CKHYSELF 150
Query: 321 ELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+LG ++ ++ E + ++ T++YTSGT G K VMLSH NIT N L
Sbjct: 151 QLGEDESNQPEVEARKEAVKPDDLATIIYTSGTTGRPKGVMLSHWNITSNVLDSSARVPL 210
Query: 380 ESAALS-VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
S+ + ++SFLP+ HI + + IY +++FA+
Sbjct: 211 PSSGETRILSFLPICHIFERVL-IYVYQYAGTSIYFAE 247
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V K Q +D+ N K ++I++FE P +SI G L PTMK+KR + YQ + D
Sbjct: 528 VIKRIQKEVDKYN-KHFGKWEQIKRFELTPDVWSIDGGHLTPTMKMKRSVIKGIYQDLYD 586
Query: 482 KFY 484
K Y
Sbjct: 587 KIY 589
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
+ +G+K+ + +A S + + Y + ++ LI SK ++A+G +S
Sbjct: 284 ELSGIKKGLFFWAVSLG-EKWEPYGANGAWYEFKLKIANKLIFSKWREALG-GELGTMVS 341
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G+A + L R F + + + E +G++E + TV D FK VG+ I + KI
Sbjct: 342 GSAALQPRLSRIFCAAGMKVMEGYGLTETSPVVTVGMYRDHMFKPGTVGKPIANVEVKIA 401
Query: 193 DPDE 196
+ DE
Sbjct: 402 EDDE 405
>gi|28897125|ref|NP_796730.1| long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus RIMD
2210633]
gi|260361698|ref|ZP_05774725.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
gi|260878037|ref|ZP_05890392.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|260896932|ref|ZP_05905428.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|260903404|ref|ZP_05911799.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|28805334|dbj|BAC58614.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
RIMD 2210633]
gi|308088769|gb|EFO38464.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|308089896|gb|EFO39591.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|308109048|gb|EFO46588.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|308115498|gb|EFO53038.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
Length = 602
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ V T++ A L GL + I N P+W +D A+ G +Y TN+
Sbjct: 36 ITWEQFGQQVDTLSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDE 318
+ + +D + V + Q + + + QC +L+ IV D ISW +
Sbjct: 96 AAQSAYIIDNADVKVLFVGEQPQFDAAVSIFEQCEQLELIVAMSDDIELGDHDFAISWKD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ G + LD LE ++ TL+YTSGT G K VML + NI Q
Sbjct: 156 FVAKGDTSHQAELDERLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LSQDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y+
Sbjct: 547 KELAKFEQVKKFKLLPRAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYN 596
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSK++ +G R G A + + R+F ++ I + +GM+E T+S DD
Sbjct: 331 LVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA--TISCWDD 387
Query: 175 --FKLDGVGRTIPGTQTKIVDPDE 196
F D +G ++PG Q KI + +E
Sbjct: 388 KCFDPDSIGMSMPGAQVKIGENNE 411
>gi|262275041|ref|ZP_06052852.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
gi|262221604|gb|EEY72918.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
Length = 597
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 4/227 (1%)
Query: 198 GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMY 257
G GE+ +E+ + ++A L GL + I N EW +D+ A+ +Y
Sbjct: 31 GWGELSWREFGKCIDAASRAMLVSGLAVQDKIGIFANNCAEWSIADIAALQVRCVPVPIY 90
Query: 258 TTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV---I 314
TN+ E + L + I V D Q++ + + CP L+ IV ++ D G +
Sbjct: 91 PTNTAEQAAYILRDAGVRILFVGDQSQVDAAMSIADSCPSLEKIVSFDDNVDFAGHAMGM 150
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
W ++ D ++ L A ++ TL+YTSGT G K VML + NI
Sbjct: 151 GWRCFLQTANDNVDPEFNKRLADAAMDDLMTLIYTSGTTGEPKGVMLDYANIAAQIESHD 210
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q + +S ++FLPLSH+ + Y + A + ++ A++
Sbjct: 211 QVLGISENEVS-LAFLPLSHVFERCWTFYVLHHGATNCYLSNTYAIR 256
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP++FS+ GEL PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAKFEQVKKFTLLPSEFSMSKGELTPTLKLRRKVILERYKKQIEAMY 594
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 86 YAKSTSLQHYMAYLEKNVSEP-----YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPIS 140
+ + S+ + MA + + +P +R+ L+LSK+++ +G + + G A +
Sbjct: 296 FRAAVSIGNLMAEITRKGKKPAPWLKSAHRMADKLVLSKLRELLGGNITMMP-CGGAKLE 354
Query: 141 TELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGN 199
+ R+F ++ + + +GM+E + F D +G +P + KI + +E
Sbjct: 355 PAIGRFFHAIGVNVKLGYGMTETTATVSCWDSGSFDPDSIGMPMPNAEVKIGENNEILVR 414
Query: 200 GEICLKEYEANVRTVAKAFLKLGL 223
G + ++ Y + A F K G
Sbjct: 415 GPMVMRGYYNKPKETADTFTKDGF 438
>gi|433656674|ref|YP_007274053.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
gi|432507362|gb|AGB08879.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
Length = 602
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ V T++ A L GL + I N P+W +D A+ G +Y TN+
Sbjct: 36 ITWEQFGQQVDTLSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDE 318
+ + +D + V + Q + + + QC +L+ IV D ISW +
Sbjct: 96 AAQSAYIIDNADVKVLFVGEQPQFDAAVSIFEQCEQLELIVAMSDDIELGDHDFTISWKD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ G + LD LE ++ TL+YTSGT G K VML + NI Q
Sbjct: 156 FVAKGDTSHQAELDERLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LSQDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y+
Sbjct: 547 KELAKFEQVKKFKLLPRAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYN 596
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSK++ +G R G A + + R+F ++ I + +GM+E T+S DD
Sbjct: 331 LVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA--TISCWDD 387
Query: 175 --FKLDGVGRTIPGTQTKIVDPDE 196
F D +G ++PG Q KI + +E
Sbjct: 388 KCFDPDSIGMSMPGAQVKIGENNE 411
>gi|448731479|ref|ZP_21713779.1| acyl-CoA synthetase [Halococcus saccharolyticus DSM 5350]
gi|445792232|gb|EMA42844.1| acyl-CoA synthetase [Halococcus saccharolyticus DSM 5350]
Length = 645
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 14/220 (6%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
+VR +A F LG+E V I EW +D + AGG +YT +SP+ + L
Sbjct: 72 SVRRLAAGFRDLGVEAGDRVGIFANTRMEWAQTDFALLAAGGVVTTVYTGSSPDQVEYLL 131
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDELMELGRAA 326
A VVE+ + LE++L V+ + L+ +V + +G D+ V++ ++ E G A
Sbjct: 132 DDPGATGVVVENGELLERVLAVEDEL-DLEFVVSMDEIDGYGDRDDVLTLAQVHERGVGA 190
Query: 327 PD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-----KLE 380
D + + L+ A ++ +L+YTSGT G K V L+H N N + + F K +
Sbjct: 191 FDVDEYEGWLDDRAPDDLASLIYTSGTTGQPKGVQLTHRNFKANVDQVYRRFGPRPDKGD 250
Query: 381 SAALSV----ISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ A+ ISFLPL+H+ + + + AT+ +A+
Sbjct: 251 TPAIDTDSEAISFLPLAHVFERLSGHFLMFAAGATVGYAE 290
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S+V++A+G + +SG +S +L F + IPI E +G++E A +V+ P++
Sbjct: 365 LVFSQVREALGGN-IEFLISGGGSLSPDLAELFHGMGIPILEGYGLTETAPVVSVNPPEE 423
Query: 175 FKLDGVGRTIPGTQTKI 191
++ +G I + +I
Sbjct: 424 PEIGTIGPPIHDEEVRI 440
>gi|88802788|ref|ZP_01118315.1| probable long chain fatty-acid CoA ligase [Polaribacter irgensii
23-P]
gi|88781646|gb|EAR12824.1| probable long chain fatty-acid CoA ligase [Polaribacter irgensii
23-P]
Length = 609
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
KEY +++ L+LG++ + +I N EW D+G + G + +Y T S E
Sbjct: 53 KEYIEKANAISRGLLRLGVQPNDKIALISTTNRTEWNICDIGILQIGAQSVPIYPTISKE 112
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S+A C D +EK+ ++K LK + ++ D G SW+E++E G
Sbjct: 113 DYAYVLNHSEATYCFASDSAIVEKLNQIKGDT-NLKGVFTFD---DIVGEKSWNEILETG 168
Query: 324 RAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+ ++ ++ + + + T++YTSGT G K VMLSH NI N + L +
Sbjct: 169 KDFKNQVDVEARKKEVKPEDLATIIYTSGTTGKPKGVMLSHANIVSNVRASKEKVPLANG 228
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ HI + + +Y ++FA+
Sbjct: 229 KDKALSFLPVCHIFERMI-LYLYQYCGIEIYFAE 261
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L R LI SK + A+G ++ +SGA+ + L R F + +PI E +G++E + +V+
Sbjct: 333 LARKLIFSKWQAALG-GELKLMVSGASALQQRLTRVFAAAGMPIMEGYGLTETSPVSSVN 391
Query: 171 APD-----DFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ FK+ VG+ I KI + NGEI +K
Sbjct: 392 FIEVNGVRGFKVGTVGKVIQDVDVKIAE-----NGEILIK 426
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N+ V Q +D+ N N ++I+ FE +SI G L PTMK+KR + K Y+
Sbjct: 541 NSDIVINRIQREVDKGNT-HFGNWERIKCFELTSDVWSIDGGHLTPTMKMKREVIKKTYK 599
Query: 478 SIIDKFY 484
++ DK Y
Sbjct: 600 NLYDKIY 606
>gi|383762386|ref|YP_005441368.1| putative fatty-acid--CoA ligase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382654|dbj|BAL99470.1| putative fatty-acid--CoA ligase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 640
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E ++ VR +A L+LG++R V +G N + ++ LG + GG G+YT
Sbjct: 36 EFTWQDSYEQVRDIALGLLELGMQRGDRVATVGDNDRFYLWAYLGLLAVGGVQVGLYTDA 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISW 316
+ + + SDA +D +Q +K+L V+ + PK++ ++ ++ + +P +IS
Sbjct: 96 GSDEIAYIVDHSDAVFVFAKDQEQCDKLLDVRKRLPKVQRVIYWDDRGLWNYQEPWLISL 155
Query: 317 DELMELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+E+ LGR + +R + +A ++ L YTSGT G K ML+H N+ +
Sbjct: 156 EEVQALGRKLYEREPERFEQEVAAGRGDDLAVLCYTSGTTGLPKGAMLTHANMIYATEAF 215
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDI 402
Q + +S LPL IA + +
Sbjct: 216 HQ-VDPRYDTDNHVSLLPLGWIAEHVLGV 243
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
+ ++ +G R R + + A +S + R+F +L I + +++G +E +G TV +D K
Sbjct: 339 FAPLRDQLGFSRLRAAYTAGAALSPDAMRFFHALGINLKQIYGSTEVSGGATVHRDNDIK 398
Query: 177 LDGVGRTIPGTQTKIVDPDEEGNGEICL 204
VG+ PG + +I + +GEI +
Sbjct: 399 FASVGKPAPGIEVRIAE-----DGEILI 421
>gi|213961736|ref|ZP_03390002.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
gi|213955525|gb|EEB66841.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
Length = 590
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIG-FNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
EY TV++ L+LG+++ + +I N EW D+G + G +Y T + E
Sbjct: 39 EYIKKANTVSRGLLRLGIQKNDKIAVISSTNRTEWHVLDIGILQVGAQNVPIYPTINLED 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L S+ CVV D + EKI ++ + P LK I + D P W E+++LG
Sbjct: 99 FEYILNHSECKYCVVSDKELWEKISSIQDKLPHLKTIFTFN---DVPYAHHWQEILDLGA 155
Query: 325 AAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+++ ++ ++I ++ T++YTSGT K VMLSH NI N + +
Sbjct: 156 DESNQAEVEARKDSIQKDDLATIIYTSGTTSRPKGVMLSHWNIISNILNCQDRLPIAEGS 215
Query: 384 LSVISFLPLSHI 395
+ +SFLP+ H+
Sbjct: 216 -TALSFLPVCHV 226
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+KR + +A + Y Y + +L R LI SK ++A+G R ++ +SG+A
Sbjct: 286 GIKRKLFFWALELGFK-YEPYGANGAWYQFKLKLARKLIFSKWREALG-GRIQMIVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+S L + F + + I E +G++E A V+ +K+ VG+ I KI +
Sbjct: 344 ALSPRLAKVFSAAGLKIMEGYGLTETAPVIAVNRESGRFWKIGTVGKPIVNVDVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI +K
Sbjct: 402 ---DGEILVK 408
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
++++ F+F P +++I G L PT+K+KR + +KY I +KFY+
Sbjct: 546 EQVKLFDFTPDEWTIDGGHLTPTLKLKRRVIKEKYIDIYNKFYN 589
>gi|387792270|ref|YP_006257335.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
gi|379655103|gb|AFD08159.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
Length = 592
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 6/212 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E+ NV ++ L+LG++++ V + N PEW + D + +Y T +
Sbjct: 38 EEFRENVDLLSLGLLQLGIDKHDRVGNMSANRPEWNFVDFAILQIDATHVPLYPTLAEND 97
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
L ++ + V + EK+ +++ + P L AI Y+ D G +SW+ + ++GR
Sbjct: 98 LKFILNDAEVKVLFVATKELYEKVQRIQHEVPSLTAIYTYD---DVDGALSWEAVKDMGR 154
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
SL + + ++ TL+YTSGT G K VML+H N+ N +
Sbjct: 155 KGDRSSLKEWNDKVTPDDLLTLIYTSGTTGNPKGVMLTHSNLVSNVVSCNKI--CPQGTH 212
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPLSHI + + +Y +++ ++++A+
Sbjct: 213 KALSFLPLSHIFERMI-VYMYLSIGVSVYYAE 243
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 110 RLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV 169
+L R LI SK + A+G +V +SG A + L R F IP+ E +G++E + V
Sbjct: 314 KLARKLIFSKWQAALG-GNVKVIVSGGAALQERLARVFFGAGIPVVEGYGLTETS---PV 369
Query: 170 SAPDDFKLDG-----VGRTIPGTQTKIVDPDEEGNGEICLK 205
A + + G VG+ I G + KI + +GEI K
Sbjct: 370 IAVNTLQSGGKHFGTVGKVIDGVEVKIAE-----DGEILCK 405
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
N +V Q +D+ N + ++I+KF LP ++SI GE+ P + +KR +++K +
Sbjct: 519 NHHEVIAKYQQEVDKYN-EDFGKWERIKKFIVLPKEWSIDGGEMTPKLSLKRKVILEKNK 577
Query: 478 SIIDKFY 484
S++++ Y
Sbjct: 578 SLVEQIY 584
>gi|452959029|gb|EME64370.1| long-chain-fatty-acid-CoA ligase, FadD11 [Rhodococcus ruber BKS
20-38]
Length = 612
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 185 PGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDL 244
PGT+ D+E + ++ VR +A + LG+E + + EW DL
Sbjct: 35 PGTEAFRFPKDDEWE-SVTWQQVGDRVRLLAAGLIALGIEPEDRIALASSTRYEWVVIDL 93
Query: 245 GAIYAGGFAAGMY-TTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ 303
+ AG +Y TT +P+ + S + + V ED Q++K+++ +AQ P ++ +V
Sbjct: 94 AVMCAGAATTTVYPTTKAPDVGF-IVSNSGSRVVVAEDQAQVDKLVEQRAQLPDVQQVVV 152
Query: 304 YEGKPDKPGVISWDELMELGRA----APDESLDRVLETIATNECCTLVYTSGTEGASKPV 359
+G D VI+ EL E GR +P+ DR+ I + TL+YTSGT G K V
Sbjct: 153 IDGPGDGGWVITLAELEERGRQLIAESPNVVEDRI-RAIRPDHLATLIYTSGTTGKPKGV 211
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTV 400
L H T+ AA + L L + +LPLSH+ + +
Sbjct: 212 RLPHSAWTYTAAAVDALGILGPDDLQYL-WLPLSHVFGKVL 251
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPY---TYRLVRWLILSKVKQAMGLDRCRVSLS 134
G K+ I ++A + A E P Y+L L+ +K+++ G R R +S
Sbjct: 306 GAKKKIFDWAVGVGTRVSKAKQEDRDPSPLDRLQYKLADKLVFTKIRERFG-GRLRFFVS 364
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G+AP+ ++ ++F ++ I + E +G+SE + A ++ P ++ VG P T+ KI +
Sbjct: 365 GSAPLDRDVAQWFDAVGIIVLEGYGLSETSAASFLNRPLAYRFGTVGWPFPETEVKIAE- 423
Query: 195 DEEGNGEICLK------EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAI 247
+GEI +K Y A+AF G WF++ D+G I
Sbjct: 424 ----DGEILVKGPGVMSGYHDRPDADAEAFEDDG----------------WFHTGDIGEI 463
Query: 248 YAGGF 252
+ GF
Sbjct: 464 DSDGF 468
>gi|383643113|ref|ZP_09955519.1| acyl-CoA synthetase, long-chain fatty acid:CoA ligase [Streptomyces
chartreusis NRRL 12338]
Length = 598
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ + A V T AK + G++ V ++ EW D AG +Y T+
Sbjct: 45 DVTATAFLAEVHTAAKGLIAAGVQPGDRVGLMSRTRYEWTLLDFAIWSAGAVTVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A CVVE D I V+ P LK + Q +G G+ DEL
Sbjct: 105 SPEQVQWILGDSGATACVVESDAHSAAIESVRDGLPALKHVWQIDGG----GI---DELG 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
LG+ DE+++ ++ T+VYTSGT G K +L+H + I++ +
Sbjct: 158 RLGQDVTDETVEERGSFAKADDPATIVYTSGTTGRPKGCVLTHRSFFAECGNIVERLRPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLPL+H+ + V I +M
Sbjct: 218 FRTGECSVLLFLPLAHVFGRLVQIAPMM 245
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+R L+ SK++ +G R ++SG AP+ L +F + + E +G++E A
Sbjct: 326 HRTFDKLVYSKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATA 384
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYH 227
+ D K+ VG+ +PG+ +I D E +GE KEY N A+A
Sbjct: 385 FNPWDRQKIGTVGQPLPGSVVRIADDGEVLLHGEHLFKEYWNNPGATAEAL--------- 435
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLE 286
A WF++ D+G + G+ + T + + + V+ED
Sbjct: 436 --------ADGWFHTGDIGTLDEDGY---LRITGRKKEIIVTAGGKNVAPAVIED----- 479
Query: 287 KILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
+++A + +V +G+P +I+ DE LGR D
Sbjct: 480 ---RIRAHALVAECMVVGDGRPFVGALITIDEEF-LGRWCADHG 519
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A QAA+D N ++S A+ ++KF L + F+ +G L P++K+KR V K Y ++ Y
Sbjct: 538 AIQAAVDDGN-AAVSKAESVRKFRILSSQFTEESGHLTPSLKLKRNVVAKDYAHEVEAIY 596
>gi|374597993|ref|ZP_09670995.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|423323671|ref|ZP_17301513.1| hypothetical protein HMPREF9716_00870 [Myroides odoratimimus CIP
103059]
gi|373909463|gb|EHQ41312.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|404609198|gb|EKB08594.1| hypothetical protein HMPREF9716_00870 [Myroides odoratimimus CIP
103059]
Length = 591
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 7/213 (3%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
Y +++A L+LG++ + +I N +W D+G + G +Y T +PE
Sbjct: 40 YLQKANALSRALLRLGVQPNDKIAVISSNNQTKWNLLDIGILQIGAQNIPIYPTIAPEDY 99
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG-R 324
L S+A CVV D + +K++ V Q P +KA+ ++ G + DEL ELG
Sbjct: 100 HFILSHSEATYCVVSDQEIYDKLMSVIDQLPLIKAVYSFD---TIAGCKNLDELFELGAD 156
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL-ESAA 383
+ E +++ + ++ TL+YTSGT G K VMLSH+NI N +
Sbjct: 157 ESNQEQVEQRKAAVTPDDLATLIYTSGTTGKPKGVMLSHNNILSNVLGSSERVPFTREQH 216
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPL H+ + + IY +++A+
Sbjct: 217 FKALSFLPLCHVFERML-IYLYQYSGVGIYYAE 248
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++++KFE P +SI G+L PT+K+KR +++ Y+ + +K Y
Sbjct: 547 EQVKKFELTPDVWSIDNGQLTPTLKLKRRVILEIYKDLYEKIY 589
>gi|384222283|ref|YP_005613449.1| fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA 6]
gi|354961182|dbj|BAL13861.1| fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA 6]
Length = 636
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E+ + +A A G +I PEW ++D+G + AGG ++G+Y T++
Sbjct: 68 REWLEISKEIAYALRASGFLPGDVASVIANAVPEWVHADMGILCAGGVSSGIYPTDASSQ 127
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDEL 319
+ + S + ED++QL+K+L +A+CP L+ I+ ++ G D V+S DE
Sbjct: 128 VEYLVNDSRTKVIFAEDEEQLDKVLACRARCPSLQKIIVFDMEGLRGFSDDM-VMSLDEF 186
Query: 320 MELGR--AAPDESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
LGR E+L ++++ + ++ LVYTSGT G K M ++ ++T +
Sbjct: 187 RALGRNHMVGREALWQEMIDSRSADDLVILVYTSGTTGPPKGAMHANRSVTHQMRHANDF 246
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+I FLPL H+A + Y + + + + FA+
Sbjct: 247 ISAREDEDRLI-FLPLCHVAERVAGYYISVALGSVMNFAE 285
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 99 LEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVF 158
L ++ YRL +++ MGLDRCR++ +GAAPI+ EL R++L+L I + EV+
Sbjct: 353 LSLRIANGIAYRLA----FRNIRRMMGLDRCRIAFTGAAPIAPELIRWYLALGIDMHEVY 408
Query: 159 GMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
G +E G T+ + K VG + + + PD GEI +K
Sbjct: 409 GQTENCGVATMMPAERIKFGSVGTAVSWGEVAL-SPD----GEILIK 450
>gi|84501720|ref|ZP_00999892.1| AMP-binding enzyme [Oceanicola batsensis HTCC2597]
gi|84390341|gb|EAQ02900.1| AMP-binding enzyme [Oceanicola batsensis HTCC2597]
Length = 609
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y R + +A + LG+++ V I+ + EW Y DL + G AG+YTT+S
Sbjct: 51 RDYYDCARKIGRALMALGVKKGEPVLILAEDRREWLYIDLASASIGAIPAGVYTTDSAAQ 110
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELM 320
+ S A + VE+D+QL+K L+ + + ++ +V E + P V+ DEL
Sbjct: 111 LAYLANDSGARVLFVENDEQLDKYLEARDRMEGIQKVVVMEREGLASFSDPKVMFLDELY 170
Query: 321 ELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+G + ++ + + L+YTSGT G K M++H N+ F +
Sbjct: 171 AMGETEETREPGLFEEAIKAVRPEDPRMLIYTSGTTGPPKGAMITHRNMIFQMRSGSECL 230
Query: 378 K-LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ LES L + FLPL H+ + V + + + + FA+
Sbjct: 231 EFLESDNL--LCFLPLCHVLERIVSVEAPIANGCIVNFAE 268
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L+ +++ +GL R SGAAPIS +L +F +L +P+ E +GM+E AG TV+ +D
Sbjct: 345 VLANLRRMLGLANARRVTSGAAPISPDLIHWFGALGVPLIEGYGMTETAGIATVNTVEDN 404
Query: 176 KLDGVGRTIPGTQTKIVDPDEEG 198
++ VG IPG + +I DE G
Sbjct: 405 RIGTVGTAIPGVEMRI---DETG 424
>gi|89902268|ref|YP_524739.1| AMP-dependent synthetase and ligase [Rhodoferax ferrireducens T118]
gi|89347005|gb|ABD71208.1| AMP-dependent synthetase and ligase [Rhodoferax ferrireducens T118]
Length = 618
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
V +A + LG + I+ EW ++DL + GG + G+Y T++ +
Sbjct: 60 VSEIAGGLMSLGFAKGECTSILANTVVEWVWADLAVLSCGGVSNGIYPTDAASQVQYLCA 119
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGR-- 324
S VEDD+QL+K L+V+ Q P L+ IV ++ + D +IS D+L LGR
Sbjct: 120 DSRTTFLFVEDDEQLDKALEVRDQLPSLRKIVVFDMEGLRNLDDANIISLDDLRALGRDY 179
Query: 325 --AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA----ACIIQYFK 378
P+E RV + ++ LVYTSGT G K M H + + I Q +
Sbjct: 180 LAQHPNELQQRV-DACQPDDLAILVYTSGTTGKPKGAMHLHAGLVYTVRGFNTLIAQDER 238
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
E + FLPL HIA + Y + L F +
Sbjct: 239 DER-----MCFLPLCHIAERMGGEYFALYTGTKLNFVE 271
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 79/145 (54%), Gaps = 15/145 (10%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+++ +WL L+ V++ +G+ R R ++GAAPIS +L R++L+L +P+ EV+GM+E GA T
Sbjct: 345 FQIAQWLALNNVRKLIGIHRARFLVTGAAPISPDLVRWYLALGVPMLEVWGMTETCGAST 404
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHS 228
+ + +G + ++ DP GEI ++ + V +L L + +
Sbjct: 405 GVPAERMRPGSIGPAASFNEVRL-DP---ATGEILVRG-----KNVFAGYLNLPEKTAET 455
Query: 229 VCIIGFNAPEWFYS-DLGAIYAGGF 252
+ G W ++ D+GA+ A G+
Sbjct: 456 IDPDG-----WLHTGDVGAMDADGY 475
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V Q IDR N K + ++I+KF L + EL PTMK+KR V KKY + I
Sbjct: 555 EVQALIQGEIDRVN-KKFARVEQIKKFFLLENQLTAEDEELTPTMKLKRKLVEKKYAAQI 613
Query: 481 DKFY 484
+ Y
Sbjct: 614 EAMY 617
>gi|145629146|ref|ZP_01784945.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|145633445|ref|ZP_01789175.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145639710|ref|ZP_01795313.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148825717|ref|YP_001290470.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
gi|144978649|gb|EDJ88372.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|144986008|gb|EDJ92610.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145271267|gb|EDK11181.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148715877|gb|ABQ98087.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
Length = 599
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 132/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLTHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIKTGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|309750679|gb|ADO80663.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2866]
Length = 607
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 132/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 42 DISWKNFQEQLNQLSRALLTHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 102 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 161
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 162 SFIKTGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 212
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 213 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 272
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 273 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLK 329
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 330 KQFALADKL 338
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 554 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 602
>gi|119717337|ref|YP_924302.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
gi|119537998|gb|ABL82615.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 600
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 9/216 (4%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD G ++ ++ A V VAK + G+E V +I EW D A +AG
Sbjct: 42 PDAAGWEDVTAAQFLAEVSGVAKGLIAAGIEAGDRVAVISKTRYEWTLLDYAAWFAGAVT 101
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y T+S E L S A V E L +I +V++ +L +
Sbjct: 102 VPIYETSSAEQIAWILADSGARAVVAEGADHLARIREVRSGLDQLNHVWSIADN------ 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+ D L+ LG DE L++ T + TL+YTSGT G K ML+H N F +
Sbjct: 156 -AVDNLVRLGADISDEELEKRRTTATPLDLATLIYTSGTTGRPKGCMLTHGNFMFELSVA 214
Query: 374 IQYFK--LESAALSVISFLPLSHIAAQTVDIYSVMT 407
+ E S + FLPL+H+ A+ + + + T
Sbjct: 215 VAELPELFEGDDSSTLLFLPLAHVFARIIQVGCIKT 250
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ + R L+ K+ A+G CR ++SG AP+ L ++ + + + E +G++E A T
Sbjct: 329 HAVFRRLVYGKLLAALG-GSCRYAVSGGAPLGDRLGHFYRGIGLTVLEGYGLTETTAALT 387
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
V+ PD K+ VGR +PGT ++ D E
Sbjct: 388 VNLPDAIKVGTVGRPLPGTAVRVADDGE 415
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 428 AAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AA++ AN K++S A+ I+KF LP +++ G+L P++K++R V+++ + + Y
Sbjct: 543 AAVEDAN-KAVSKAESIRKFTILPDEWTEEGGQLTPSLKIRRNVVMRELKDDVAALY 598
>gi|27383039|ref|NP_774568.1| fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA 110]
gi|27356213|dbj|BAC53193.1| bll7928 [Bradyrhizobium japonicum USDA 110]
Length = 612
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 10/220 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E+ + +A A +G II PEW ++D+G + AGG ++G+Y T++
Sbjct: 44 REWLEISKEIAYALRAIGFMPGDVASIIANAVPEWVHADMGILCAGGVSSGIYPTDASSQ 103
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDKPGVISWDEL 319
+ + S + ED++QL+KIL + +CP L+ IV ++ G D V+S DE
Sbjct: 104 VQYLVNDSGTKVIFAEDEEQLDKILTCRTRCPSLQRIVVFDMEGLSGFSDD-MVMSLDEF 162
Query: 320 MELGR--AAPDESL-DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
LGR E+L ++++ + LVYTSGT G K M ++ ++T +
Sbjct: 163 RALGRNHMVGREALWQEMIDSRGPEDLAVLVYTSGTTGPPKGAMHANRSVTHQMRHANDF 222
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+I FLPL H+A + Y + + + + FA+
Sbjct: 223 IPARENEDRLI-FLPLCHVAERIGGYYISVALGSVMNFAE 261
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 67 WKK----VTYKLQ-TTGVKRWIANYAKSTSLQHYMAYLE-KNVSEPYTYRLVRWLI---- 116
W+K +T L+ T +++W+ Y ++ + + M + + P + RL L
Sbjct: 285 WEKFYSAITIALKDATPLQQWV--YRRAIGIGYRMVDCRIEGRAPPLSLRLANQLAYRLA 342
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
+++ +GLDRCR++ +GAAPI+ EL R++L+L I + EV+G +E G T+ K
Sbjct: 343 FRNIRRMIGLDRCRIAFTGAAPIAPELIRWYLALGIDMHEVYGQTENCGVATMMPATRIK 402
Query: 177 LDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
L VG + + + PD GEI +K
Sbjct: 403 LGSVGTAVSWGEVAL-SPD----GEILIK 426
>gi|229521309|ref|ZP_04410729.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|421355168|ref|ZP_15805500.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
gi|229341841|gb|EEO06843.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|395954293|gb|EJH64906.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
Length = 601
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 5/239 (2%)
Query: 182 RTIPGTQTKIVDPDEEGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWF 240
R + G + + G + I ++ + ++ A L G+ + I N P W
Sbjct: 15 RIVQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWT 74
Query: 241 YSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKA 300
+D A+ +Y TN+PE + L +D + V + Q + L QCP+L+
Sbjct: 75 IADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRL 134
Query: 301 IVQYEGKPD---KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASK 357
IV D + WDE + LD ++E ++ TL+YTSGT G K
Sbjct: 135 IVAMNANIDLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANYDDLFTLIYTSGTTGTPK 194
Query: 358 PVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
VML + NI Q L +S + FLPLSH+ + Y + A + D
Sbjct: 195 GVMLDYRNIGAQLEGHDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|419838174|ref|ZP_14361612.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|421344598|ref|ZP_15795001.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|422308417|ref|ZP_16395567.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|423736135|ref|ZP_17709325.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|424010468|ref|ZP_17753401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
gi|424660979|ref|ZP_18098226.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|395940678|gb|EJH51359.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|408049851|gb|EKG85040.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|408617687|gb|EKK90800.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|408629107|gb|EKL01820.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|408856722|gb|EKL96417.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|408863097|gb|EKM02593.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
Length = 601
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 5/239 (2%)
Query: 182 RTIPGTQTKIVDPDEEGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWF 240
R + G + + G + I ++ + ++ A L G+ + I N P W
Sbjct: 15 RIVQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWT 74
Query: 241 YSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKA 300
+D A+ +Y TN+PE + L +D + V + Q + L QCP+L+
Sbjct: 75 IADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRL 134
Query: 301 IVQYEGKPD---KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASK 357
IV D + WDE + LD ++E ++ TL+YTSGT G K
Sbjct: 135 IVAMNANIDLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANYDDLFTLIYTSGTTGTPK 194
Query: 358 PVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
VML + NI Q L +S + FLPLSH+ + Y + A + D
Sbjct: 195 GVMLDYRNIGAQLEGHDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|333990813|ref|YP_004523427.1| fatty-acid--CoA ligase [Mycobacterium sp. JDM601]
gi|333486781|gb|AEF36173.1| fatty-acid-CoA ligase FadD11 [Mycobacterium sp. JDM601]
Length = 611
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 31/251 (12%)
Query: 154 ICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRT 213
+CE F + + PD L RT+ G QT + +EY A VR
Sbjct: 10 LCEAFQRT------AATDPDGVAL----RTVGGGQT------------LTWREYAAQVRQ 47
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA LG+ R +V ++ N E++ ++GA +AG + +Y T E H +
Sbjct: 48 VAAGLAGLGVCRGDTVSLMMANRIEFYPLEVGAQHAGATSFSVYNTLPAEQLGHQFGNAG 107
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDR 333
+ + E + +++ ++ IV +G+PD G +S +L+ GR PD +
Sbjct: 108 TKVVICEQ----PYVETIRSSGAPVEHIVCIDGRPD--GTLSLADLLAAGR--PDFDFES 159
Query: 334 VLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLS 393
+ ++ TL+YTSGT GA K V ++H N+ F AA + + + S+LP +
Sbjct: 160 SWRAVQPDDVITLIYTSGTTGAPKGVEMTHTNLLFEAAALDAVLGVRFGD-RITSYLPSA 218
Query: 394 HIAAQTVDIYS 404
HIA + + +Y+
Sbjct: 219 HIADRAMGLYN 229
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSK++ +G R ++SGAAPI E +F + IPI EV+GMSE + + + P D
Sbjct: 322 LVLSKLRAKLGFGELRWAVSGAAPIPRETLGFFAGIGIPISEVWGMSELSCVASTTHPRD 381
Query: 175 FKLDGVGRTIPGTQTKIVDPDE 196
+L VG+ +PG + +I D E
Sbjct: 382 ARLGTVGKLLPGLEGRIADDGE 403
>gi|254226261|ref|ZP_04919854.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
gi|125621234|gb|EAZ49575.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
Length = 601
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQATYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++L L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQLADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
>gi|452825577|gb|EME32573.1| long-chain acyl-CoA synthetase [Galdieria sulphuraria]
Length = 728
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 14/225 (6%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
K+Y V A L LG V I+ N PEW ++DL + GG AG+Y + E
Sbjct: 152 KQYGELVVKTANGLLALGFTYGDHVTILSANCPEWLFADLATMCLGGSTAGIYPNDVAEQ 211
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----------PGVI 314
+ DA V+ KQL ++ Q KL I+ + D +I
Sbjct: 212 IVFINQNFDAKFFFVDSLKQLVRLKPFLNQLTKLIYIIVLSLETDNQEERDMVETDSRII 271
Query: 315 SWDELMELGRAAPDESLDRVLET---IATNECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
S+ L+ELG+ + S + V E I + C VYTSGT G K SH NI
Sbjct: 272 SYARLLELGKTYSERSPNYVEENARKITPDTFCMTVYTSGTTGQPKGACYSHQNIYCVGT 331
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
I + + + ++SFLPL H+A + ++ + +++FA+
Sbjct: 332 TIAEELNCQGRDI-LLSFLPLCHVAERIQSLFLAIAGKCSVYFAE 375
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYR-LVRWLILS-- 118
W+K+ LQ TTG+KR + + T L +A L +N + + + WLILS
Sbjct: 399 WEKLYQALQAEFETTTGMKRHLLH---QTLLFGRLARLHRNYGKSISRAAMFEWLILSLL 455
Query: 119 ---KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
K++ +GLDRC SGAAP+S E+ +F L + + +V+G SE G S
Sbjct: 456 VVRKIRVTIGLDRCHTFASGAAPLSEEVAMFFGDLGMDVRQVYGQSESTGIIAYSPKRAI 515
Query: 176 KLDGVGRTIPGTQTKIVDPDE 196
+ G+ Q K+ D +E
Sbjct: 516 RPGNTGKVPSVIQVKLGDNNE 536
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + + + + N +++ ++I+ ++ LP DF+I E+ PT+K++R + ++Y+ I
Sbjct: 658 KVLQLVDSYVQQVN-DGLASYEQIKYYKLLPEDFTIEREEMTPTLKIRRKQIEQRYKEWI 716
Query: 481 DKFYDV 486
D Y V
Sbjct: 717 DSMYSV 722
>gi|435845642|ref|YP_007307892.1| AMP-forming long-chain acyl-CoA synthetase [Natronococcus occultus
SP4]
gi|433671910|gb|AGB36102.1| AMP-forming long-chain acyl-CoA synthetase [Natronococcus occultus
SP4]
Length = 660
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 15/229 (6%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E VR +A F +LG+E V I EW +D A+ AG +YT++S
Sbjct: 64 ISYTEMRTIVRNLAAGFRELGIESGDRVGIFADTRMEWAQTDFAALSAGAVVTTVYTSSS 123
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY---EGKPDKPGVISWDE 318
P+ + L DA+ VVE++ LE++L+V+ L+AIV EG D+ +++ +
Sbjct: 124 PDQVRYLLDDPDADAVVVENEALLERVLEVEDDL-DLEAIVSMDALEGYDDRDDILTLAD 182
Query: 319 LMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ G A + E+ + L+ ++ +L+YTSGT G K V L+H N N + + +
Sbjct: 183 VYAHGEDAFELEAYEEWLDEPELDDLASLIYTSGTTGQPKGVELTHRNFRSNVNQVRRRY 242
Query: 378 ----------KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL+H+ +T + + A + +A+
Sbjct: 243 GPRPDKGDEVPVIDETKQAVSYLPLAHVFERTAGHFLMFASGACVAYAE 291
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 67 WKKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPY---TYRLVRWLILSKVKQA 123
+ + + +G K+ I +A +Q Y E + P L L+ S V++A
Sbjct: 319 YDTIREQASESGAKKRIFEWATDVGVQ----YQEADDPGPVLGAKQALADKLVFSNVREA 374
Query: 124 MGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRT 183
+G + + +SG +S EL + ++ +PI E +G++E A +V+ P++ ++ +G
Sbjct: 375 LGGE-IELLISGGGSLSKELCTLYHAMGLPIYEGYGLTETAPVVSVNPPEEPRIGTIGPA 433
Query: 184 IPGTQTKI 191
+PG ++
Sbjct: 434 LPGVDVRV 441
>gi|433603463|ref|YP_007035832.1| Long-chain-fatty-acid-CoA ligase FadD15 [Saccharothrix espanaensis
DSM 44229]
gi|407881316|emb|CCH28959.1| Long-chain-fatty-acid-CoA ligase FadD15 [Saccharothrix espanaensis
DSM 44229]
Length = 602
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +++ A V VAK + GL V ++ EW D +AGG +Y T+
Sbjct: 45 DVTARDFAAQVLAVAKGLIASGLRAGDRVGLMSKTRYEWTLLDFAIWHAGGVVVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG-KPDKPGVISWDEL 319
+ E L S A +E + + V ++ P+L+++ Q +G D G I DEL
Sbjct: 105 AAEQVEWILSDSQAKAVFIETAEHKATLDTVVSELPELRSVFQIDGPGADAAGAI--DEL 162
Query: 320 MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-K 378
LG D+ E + ++ T+VYTSGT G K L+H N+ + F +
Sbjct: 163 TALGAGVSDDDARARREEVGADDTATIVYTSGTTGRPKGCELTHYNLLSEVRSDVAAFPQ 222
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMT 407
L A S++ FLPL+HI A+ + + V T
Sbjct: 223 LMQAGNSLLVFLPLAHILARAIALCGVYT 251
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G RC ++SG AP+ L +F + +P+ E +G++E + A V+
Sbjct: 336 LVYSKLQAALG-GRCIAAVSGGAPLGARLAHFFRGVGVPVLEGYGLTETSAAACVNTETA 394
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
F++ VGR I GT +I + E G++ + Y N A+A L+ G
Sbjct: 395 FRVGTVGRPIAGTAVRIAEDGEILIKGDVVFRSYWNNPTATAEA-LEDG----------- 442
Query: 234 FNAPEWFYS-DLGAIYAGGF 252
WF+S DLG + GF
Sbjct: 443 -----WFHSGDLGELDDDGF 457
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QAA+D AN ++S A+ I++F LP DF+ GE+ P++K+KR V Y+ I+ Y
Sbjct: 544 QAAVDEAN-HAVSKAEAIKRFRVLPVDFTEAGGEMTPSLKLKRSVVATTYKQDIEAIY 600
>gi|325577823|ref|ZP_08148098.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
gi|325160568|gb|EGC72694.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
Length = 605
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 20/300 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I ++ + ++ AFL ++ + I N W +D+ A+ +Y TN
Sbjct: 34 DISWNSFQQQLDQLSLAFLACNIQVQDKIAIFANNMSRWTIADIAALQVRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ QCP+L+ IV + + + WD
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHQCPQLQKIVAMKEQIKLTESTLSCHWD 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+L++LG A + L A ++ T++YTSGT G K VML + N+
Sbjct: 154 DLIQLGTAEFQAEFETRLANKAMDDLFTIIYTSGTTGEPKGVMLDYSNLAHQLEAHDIAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYKATQAAIDR 432
+ +S +SFLP SHI + Y + A + D N ++ V A+ R
Sbjct: 214 DVNQDEVS-LSFLPFSHIFERAWVAYVLHRGAILCYLEDTNQVREALTEVRPTFMCAVPR 272
Query: 433 ANLKSISNA-QKIQKFEFLPA---DFSIPTGE-----LGPTMKVKRPFVVKKYQSIIDKF 483
K S K+QK F+ ++I G+ L KV PF ++K ++ DK
Sbjct: 273 FYEKIYSAVLDKVQKAPFIRQMIFHWAIAVGQKRFDLLSQNKKV--PFFLQKRYALADKL 330
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 34/49 (69%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FS+ GE+ PT+K++R ++++Y+ IID Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSVKLGEITPTLKLRRKVIMERYRHIIDSMY 594
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPY----TYRLVRWLILSKVKQAMGLDRCRVSLS 134
+++ I ++A + Q L +N P+ Y L L+LSK++ +G R ++
Sbjct: 291 IRQMIFHWAIAVG-QKRFDLLSQNKKVPFFLQKRYALADKLVLSKLRSLLG-GRIKMMPC 348
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIV 192
G A + + +F S+ I I +GM+E TVS DD F +G+ +P + KI
Sbjct: 349 GGAKLEPTISLFFHSIGINIKLGYGMTETTA--TVSCWDDHHFNPSSIGKLMPNAEVKIG 406
Query: 193 DPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ +E G + +K Y A+AF + G
Sbjct: 407 ENNEILVRGSMVMKGYYKKPEETAQAFTEDGF 438
>gi|153830473|ref|ZP_01983140.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
gi|148874039|gb|EDL72174.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
Length = 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
TVS DD F D +G ++PG Q KI + +E
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNE 411
>gi|15642480|ref|NP_232113.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121590764|ref|ZP_01678094.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121729013|ref|ZP_01682015.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|147675212|ref|YP_001217984.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|153819335|ref|ZP_01972002.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|153822876|ref|ZP_01975543.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|227082604|ref|YP_002811155.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227118925|ref|YP_002820821.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229507458|ref|ZP_04396963.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229512347|ref|ZP_04401826.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229519483|ref|ZP_04408926.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229606963|ref|YP_002877611.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254849608|ref|ZP_05238958.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255746847|ref|ZP_05420792.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262162012|ref|ZP_06031028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|262167313|ref|ZP_06035023.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|298500161|ref|ZP_07009966.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360036356|ref|YP_004938119.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742270|ref|YP_005334239.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|417814498|ref|ZP_12461151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|417818238|ref|ZP_12464866.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|418335481|ref|ZP_12944390.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|418339446|ref|ZP_12948336.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|418347017|ref|ZP_12951770.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|418350773|ref|ZP_12955504.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|418356029|ref|ZP_12958748.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|419827426|ref|ZP_14350925.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|421317974|ref|ZP_15768542.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|421322231|ref|ZP_15772783.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|421326029|ref|ZP_15776553.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|421329687|ref|ZP_15780197.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|421333643|ref|ZP_15784120.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|421337185|ref|ZP_15787646.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|421340612|ref|ZP_15791044.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|421348160|ref|ZP_15798537.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|422897573|ref|ZP_16935012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|422903772|ref|ZP_16938736.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|422907656|ref|ZP_16942449.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|422914496|ref|ZP_16949000.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|422926700|ref|ZP_16959712.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|423146023|ref|ZP_17133616.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|423150699|ref|ZP_17138012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|423154533|ref|ZP_17141697.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|423157601|ref|ZP_17144693.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|423161173|ref|ZP_17148111.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|423166002|ref|ZP_17152721.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|423732032|ref|ZP_17705333.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|423771758|ref|ZP_17713598.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|423896810|ref|ZP_17727642.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|423932013|ref|ZP_17732035.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|424003448|ref|ZP_17746522.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|424007242|ref|ZP_17750211.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|424025222|ref|ZP_17764871.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|424028108|ref|ZP_17767709.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|424587389|ref|ZP_18026967.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|424596043|ref|ZP_18035361.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|424599952|ref|ZP_18039130.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|424602714|ref|ZP_18041853.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|424607648|ref|ZP_18046588.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|424611464|ref|ZP_18050302.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|424614292|ref|ZP_18053076.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|424618259|ref|ZP_18056929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|424623045|ref|ZP_18061548.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|424646005|ref|ZP_18083739.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|424653772|ref|ZP_18091151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|424657593|ref|ZP_18094877.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|440710708|ref|ZP_20891356.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443504822|ref|ZP_21071774.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443508728|ref|ZP_21075483.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443512566|ref|ZP_21079199.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443516125|ref|ZP_21082630.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443519918|ref|ZP_21086305.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443524810|ref|ZP_21091013.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443532394|ref|ZP_21098408.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443536208|ref|ZP_21102075.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443539737|ref|ZP_21105590.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|449055077|ref|ZP_21733745.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
gi|9657064|gb|AAF95626.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547405|gb|EAX57518.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121628695|gb|EAX61165.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|126510116|gb|EAZ72710.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|126519613|gb|EAZ76836.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|146317095|gb|ABQ21634.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|227010492|gb|ACP06704.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227014375|gb|ACP10585.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229344172|gb|EEO09147.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229352312|gb|EEO17253.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229354963|gb|EEO19884.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229369618|gb|ACQ60041.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254845313|gb|EET23727.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255735249|gb|EET90649.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262024288|gb|EEY42979.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|262028261|gb|EEY46918.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|297540854|gb|EFH76908.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|340035834|gb|EGQ96812.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|340036984|gb|EGQ97960.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|341619829|gb|EGS45631.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|341619946|gb|EGS45733.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|341620751|gb|EGS46517.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|341636308|gb|EGS61010.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|341645701|gb|EGS69830.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|356416516|gb|EHH70147.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|356416913|gb|EHH70534.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|356422267|gb|EHH75750.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|356427738|gb|EHH80979.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|356428406|gb|EHH81633.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|356429545|gb|EHH82761.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|356439071|gb|EHH92071.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|356443666|gb|EHH96485.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|356445269|gb|EHH98078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|356449593|gb|EHI02339.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|356452527|gb|EHI05206.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|356647510|gb|AET27565.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795780|gb|AFC59251.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|395916232|gb|EJH27062.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|395917867|gb|EJH28695.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|395917971|gb|EJH28798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|395928221|gb|EJH38984.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|395929045|gb|EJH39798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|395932284|gb|EJH43028.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|395939895|gb|EJH50577.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|395942739|gb|EJH53415.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|395957678|gb|EJH68210.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|395958149|gb|EJH68652.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|395960785|gb|EJH71145.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|395970073|gb|EJH79884.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|395971996|gb|EJH81620.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|395974400|gb|EJH83929.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|408006131|gb|EKG44307.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|408010593|gb|EKG48446.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|408030465|gb|EKG67126.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|408040591|gb|EKG76766.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|408041889|gb|EKG77976.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|408051829|gb|EKG86905.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|408608216|gb|EKK81619.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|408622477|gb|EKK95461.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|408632827|gb|EKL05258.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|408653605|gb|EKL24767.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|408654098|gb|EKL25241.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|408844341|gb|EKL84473.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|408845097|gb|EKL85218.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|408869573|gb|EKM08869.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|408878384|gb|EKM17394.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|439974037|gb|ELP50241.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443430901|gb|ELS73459.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443434731|gb|ELS80883.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443438624|gb|ELS88344.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443442661|gb|ELS95969.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443446442|gb|ELT03107.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443449263|gb|ELT09564.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443457784|gb|ELT25181.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443460711|gb|ELT31795.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443464867|gb|ELT39528.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|448265119|gb|EMB02354.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
TVS DD F D +G ++PG Q KI + +E
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNE 411
>gi|52426320|ref|YP_089457.1| FAA1 protein [Mannheimia succiniciproducens MBEL55E]
gi|52308372|gb|AAU38872.1| FAA1 protein [Mannheimia succiniciproducens MBEL55E]
Length = 592
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 28/237 (11%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I +E++ + V+ A L G++ + I N P+W +DLGA+ +Y TN
Sbjct: 37 DISWEEFQFQIDRVSLALLAHGIDVQDKIGIFAHNMPQWTIADLGALQIRAVTVPIYATN 96
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPGVISWD 317
+ + + ++ I V + +QL+ IL++K CP L+ I+ + + ++SW
Sbjct: 97 TAKQAEFIINNAEIKILFVGEQEQLDTILEIKNNCPTLEKIILMKSTAEFSPNESLLSWH 156
Query: 318 ELMELGRAA---PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
M G++A P+ L+R+ + T + TL+YTSGT G K VML N+
Sbjct: 157 SFM--GKSADTDPNRLLERLNDARLT-DLFTLIYTSGTTGDPKGVMLDFSNLA------- 206
Query: 375 QYFKLESAALSV----------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+L+S L++ +SFLPLSHI + Y + A + N ++
Sbjct: 207 --HQLKSHDLALPDVVGREDVSLSFLPLSHIFERAWVAYVLHRGAVVCYLESTNEVR 261
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ +++ L+LSK++ +G ++ G A + ++ +F ++ I + +GM+E
Sbjct: 319 WRHKIADKLVLSKLRNLLG-GNIKMMPCGGAKLEGKIGEFFHAIGINVKLGYGMTETTAT 377
Query: 167 HTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ A F +GR +P + KI + +E G + +K Y N AKAF + G
Sbjct: 378 VSCWADKHFNAASIGRLMPNAEVKIGENNEILVRGGMVMKGYYNNSAETAKAFTEDGF 435
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ +++ ++++KF LP FSI E+ PT+K++R ++++Y+ I+ Y
Sbjct: 543 QELAHFEQVKKFTLLPQAFSIKMEEITPTLKLRRKVILERYRRQIEAMY 591
>gi|414171950|ref|ZP_11426861.1| hypothetical protein HMPREF9695_00507 [Afipia broomeae ATCC 49717]
gi|410893625|gb|EKS41415.1| hypothetical protein HMPREF9695_00507 [Afipia broomeae ATCC 49717]
Length = 604
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 12/198 (6%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
+ F LGL + I+ N EW + LGA A G+Y T+ + L S+
Sbjct: 50 IGLGFRALGLSAGGHIGILSENRIEWVLAQLGANIIDVVAVGVYPTSPSNEVAYVLAHSE 109
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK------PDKPGVISWDELMELG---R 324
+ I V ED +Q++K+L+ + + PKL+ I+ E K PD+ V+S+D L LG
Sbjct: 110 SEIIVCEDQEQVDKVLERRDELPKLRRIIVVETKGIRDYPPDQ--VMSFDALEALGADFE 167
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ +D +++ ++ ++YTSG+ G K MLS+ NI A ++ +A
Sbjct: 168 TSHAALVDGIIDRQQLSQIGLIIYTSGSTGKPKGAMLSYKNIRAQAIGCADRLVVDQSA- 226
Query: 385 SVISFLPLSHIAAQTVDI 402
SV+S+LPL H+A Q +
Sbjct: 227 SVLSYLPLCHVAEQMTTV 244
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 56/97 (57%)
Query: 100 EKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFG 159
++ +SE + L WL+ ++ +GL + R++++GAAPIS + +F ++ +P+ EV+G
Sbjct: 321 DRTLSEKLKFALSYWLVFRALQNFIGLRKTRIAMTGAAPISPAIVHFFRAIGVPLIEVYG 380
Query: 160 MSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE 196
++E +G D ++ VG I + K+ + +E
Sbjct: 381 LTESSGIALGQVLSDRRVGTVGNGIDRMEIKLGESNE 417
>gi|448593389|ref|ZP_21652387.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
gi|445730297|gb|ELZ81887.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
Length = 667
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 14/229 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ + + VR +A F LGL+ V + EW +D + AGG +YT++
Sbjct: 64 ELTYESMQDIVRKLAAGFRDLGLDAEDRVGLFAHTRMEWAQTDFAVLAAGGAVTTVYTSS 123
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWD 317
S + L AN VVE+++ LE++L V+ LK IV +++G D+ +++
Sbjct: 124 SERQVRYLLSDPGANAAVVENEELLERVLAVEDDL-DLKFIVVMDEFDGHDDRDDILTLG 182
Query: 318 ELMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
EL G D E+ + L+ ++ +L+YTSGT G K V L+H N N +
Sbjct: 183 ELYRRGEDVFDEETYESWLDARDPDDLASLIYTSGTTGQPKGVKLTHWNFRSNVNESYRR 242
Query: 377 FKLESAALS---------VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
F +SFLPL+H+ + + + AT+ +A+
Sbjct: 243 FGPHPGRDDAPFIGPDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAE 291
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + A ++RAN + + +KI++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 KVKERIDAEVERAN-QQFESYEKIKQFRVVPEEFSEDNDLMTPTMKKKRRNILDRYADQV 644
Query: 481 DKFYD 485
+ Y+
Sbjct: 645 NLIYE 649
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L L+ +V+ A+G + +SG +S EL + + +PI E +G++E + +
Sbjct: 360 HQLADRLVFEQVRDALGGN-MEFFISGGGSLSAELCALYHGMGLPIFEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P++ K+ +G + + K+
Sbjct: 419 VNPPEEPKIGTIGYPLRNVEVKL 441
>gi|153802845|ref|ZP_01957431.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|424592182|ref|ZP_18031606.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
gi|124121634|gb|EAY40377.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|408029778|gb|EKG66480.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
Length = 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
TVS DD F D +G ++PG Q KI + +E
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNE 411
>gi|254292111|ref|ZP_04962885.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
gi|150421979|gb|EDN13952.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
Length = 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLE 224
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGFL 440
Query: 225 R 225
R
Sbjct: 441 R 441
>gi|453069256|ref|ZP_21972522.1| long-chain fatty-acid--CoA ligase FadD15 [Rhodococcus qingshengii
BKS 20-40]
gi|452764008|gb|EME22282.1| long-chain fatty-acid--CoA ligase FadD15 [Rhodococcus qingshengii
BKS 20-40]
Length = 603
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 8/257 (3%)
Query: 160 MSECAGAHTVSAPDDFK-LDGVGRTIPGTQTKIVDPDEEGNG--EICLKEYEANVRTVAK 216
M E + T + P+D +D V +V + GN ++ ++ A V VAK
Sbjct: 1 MPEFSAPQTFTIPEDASAVDSVFAFAKTKPAAVVYKRKVGNAWVDVTAGDFAAQVTAVAK 60
Query: 217 AFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANI 276
+ +G+E+ V ++ EW D AGG +Y T++ E L S+A
Sbjct: 61 GLIAIGVEQGDRVGLMSATRFEWPLVDYAIWAAGGVTVPIYETSAAEQVRWILEDSEAID 120
Query: 277 CVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLE 336
+VE+D + V A P L+ + Q + GV+ +EL LG D+ + +
Sbjct: 121 LIVENDTHAATVKDVAAAAPALRTVYQIDAAAGGKGVV--EELTALGADISDDDVHARVA 178
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---FKLESAALSVISFLPLS 393
+ ++ TL+YTSGT G K L+H N+ + I+ L++ + + FLPL+
Sbjct: 179 ALKASDPATLIYTSGTTGRPKGCQLTHSNLIAESKGILDSNLGTLLKTPGVRTLMFLPLA 238
Query: 394 HIAAQTVDIYSVMTVAA 410
H+ A+ V I S AA
Sbjct: 239 HVLARAVSIASFDAGAA 255
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q AID AN K +S+A+ I+KF LP DFS TGEL PTMK+KR V + + + I+K Y
Sbjct: 545 QDAIDEAN-KLVSHAEAIKKFRILPVDFSEDTGELTPTMKLKRNVVHESFAADIEKIY 601
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G +C++++SG AP+ L +F + + I E +G++E A
Sbjct: 331 HALFDKLVYSKLRAALG-GQCQLAISGGAPLGARLGHFFRGIGVTIYEGYGLTETTAAFA 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
V+ K+ VG+ + G +I + +GEI L
Sbjct: 390 VNTIGAQKVGSVGKPLAGNSVRIAE-----DGEILL 420
>gi|384425421|ref|YP_005634779.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
gi|327484974|gb|AEA79381.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
Length = 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|409098435|ref|ZP_11218459.1| AMP-dependent synthetase and ligase [Pedobacter agri PB92]
Length = 591
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 6/212 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+++ A V +++ +K G+++ V ++ N PEW +D A G + +Y T +
Sbjct: 38 EQFCATVDHLSRGLIKHGIQKGGRVAVMSHNRPEWNIADFAANQIGAYQIPLYPTLAEHD 97
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
L ++ +I V D L+ K+K + ++ D GV W+ L+E G+
Sbjct: 98 IQFILKDAEISIIFVSD---LDLYKKIKPCVDTINPAIKIFSFSDIEGVTCWETLIEDGK 154
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ D +LD + + TL+YTSGT G K VML+HDN+ N + +
Sbjct: 155 NSQDINLDDYRSKVEPEDILTLIYTSGTTGTPKGVMLTHDNLVAN--FVNSSVVMPDGVN 212
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPLSHI + + IY + ++++A+
Sbjct: 213 KSLSFLPLSHIFERMI-IYLYLFNKTSIYYAE 243
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 50/192 (26%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEP---YTYRL--VRWLILSKVKQAMGLDRCRV 131
TG+KR I ++ +A EK ++ Y ++L R L+ K ++A+G V
Sbjct: 282 TGIKRGIFFWS--------VALAEKYTTDAGAWYNFKLGIARKLVFKKWQEALG-GEIVV 332
Query: 132 SLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKI 191
+SG A ++ L R F + +P+ E +G++E + TV+ VG I G + KI
Sbjct: 333 IVSGGAALNPRLARIFWAAGMPVFEGYGLTETSPVITVNHFGGTMFGTVGEVIKGVEVKI 392
Query: 192 VDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPE----------WFY 241
+GE+ L R H V +N P+ WF+
Sbjct: 393 AQ-----DGEV--------------------LTRGHQVMKGYYNRPDLTKEAIDAEGWFH 427
Query: 242 S-DLGAIYAGGF 252
+ D+G + G F
Sbjct: 428 TGDIGELIDGRF 439
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+++++F LP ++SI GEL P + +KR + +K Q II+K Y
Sbjct: 539 EQVKRFALLPKEWSINGGELTPKLSLKRKIITEKNQDIIEKIY 581
>gi|229527090|ref|ZP_04416485.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
gi|229335487|gb|EEO00969.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
Length = 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|260771297|ref|ZP_05880224.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
gi|260613894|gb|EEX39086.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
Length = 604
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 5/225 (2%)
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
D E G I ++ + ++ A L GL+ + I N P+W +D A+
Sbjct: 30 DNEWQG-ISWTQFGEEMDAMSMALLAFGLDVQDKIGIFSNNMPQWTIADFAALQIRAVTV 88
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKP 311
+Y TN+ E + L +D + V + Q + + + QC +L+ IV D
Sbjct: 89 PIYPTNTAEQAAYILQDADVKVLFVGEQPQFDAAVTMFEQCDQLQLIVAMSDAIALGDCD 148
Query: 312 GVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
+SW + LG E LD LE ++ TL+YTSGT G K VML + N+
Sbjct: 149 FAMSWQAFVALGENTSREPLDERLEQANDDDLFTLIYTSGTTGKPKGVMLDYRNVGAQLE 208
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 209 GHDQRLNLSQDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L L+LSK++ +G R G A + + R+F ++ I + +GM+E T
Sbjct: 325 HQLADKLVLSKLRGLLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA--T 381
Query: 169 VSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+S DD F D +G T+PG Q KI + +E G + ++ Y A+ F + G
Sbjct: 382 ISCWDDQCFDPDSIGMTMPGAQVKIGENNEILVRGPMVMRGYYKMPEETAQTFDEHGF 439
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 437 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++ +++++F+ LP FS+ GEL PT K++R + +YQ I++ Y
Sbjct: 548 GLAKFEQVKRFKLLPKAFSMDDGELTPTQKLRRKVIHDRYQHEIEEMY 595
>gi|297581107|ref|ZP_06943032.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|417821798|ref|ZP_12468412.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|423958046|ref|ZP_17735514.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|423985757|ref|ZP_17739070.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
gi|297534933|gb|EFH73769.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|340039429|gb|EGR00404.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|408656122|gb|EKL27224.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|408663415|gb|EKL34290.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
Length = 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|429888249|ref|ZP_19369739.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
gi|429224692|gb|EKY31030.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
Length = 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|153839176|ref|ZP_01991843.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
gi|149747314|gb|EDM58294.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
Length = 602
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ V T++ A L GL + I N P+W +D A+ G +Y TN+
Sbjct: 36 ITWEQFGQQVDTLSLALLAQGLGVQDKIGIFSNNMPQWTIADFAALQLRGVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDE 318
+ + +D + V + Q + + + QC +L+ IV D ISW +
Sbjct: 96 AAQSAYIIDNADVKVLFVGEQPQFDAAVSIFEQCEQLELIVAMSDDIELGDHDFAISWKD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ G LD LE ++ TL+YTSGT G K VML + NI Q
Sbjct: 156 FVAKGDTNRQAELDERLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LSQDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y+
Sbjct: 547 KELAKFEQVKKFKLLPRAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYN 596
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSK++ +G R G A + + R+F ++ I + +GM+E T+S DD
Sbjct: 331 LVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA--TISCWDD 387
Query: 175 --FKLDGVGRTIPGTQTKIVDPDE 196
F D +G ++PG Q KI + +E
Sbjct: 388 KCFDPDSIGMSMPGAQVKIGENNE 411
>gi|414174821|ref|ZP_11429225.1| hypothetical protein HMPREF9695_02871 [Afipia broomeae ATCC 49717]
gi|410888650|gb|EKS36453.1| hypothetical protein HMPREF9695_02871 [Afipia broomeae ATCC 49717]
Length = 643
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 196 EEGNGEICLKE-------------YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
E GN EI L+E Y+ VR ++LG++R + IIG N P+W +
Sbjct: 24 EHGN-EIALREKDFGLWRVFTWNDYQNRVRDFTLGMVELGIKRGDVIGIIGDNRPDWVAA 82
Query: 243 DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV 302
++ A GG + GMY + PE L+ L + I ED++Q++K+L++ + P LK IV
Sbjct: 83 EIAAHAVGGMSLGMYRESLPEEVLYLLTYGETKIVFAEDEEQVDKLLELGDRAPHLKHIV 142
Query: 303 QYE----GKPDKPGVISWDELMELG--RAAPDESL-DRVLETIATNECCTLVYTSGTEGA 355
+ K P ++ D+L ++G RAA + L D++++ ++ L TSGT
Sbjct: 143 YSDPRGMRKYSDPRLLDADKLAKMGRDRAAREPQLYDQLVDATKGDDVAILCTTSGTTSN 202
Query: 356 SKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQ 398
K ML+ + + A + F + +S LPL I Q
Sbjct: 203 PKLAMLAAGRVLSHCANYLA-FDPKGPDDEYVSVLPLPWIMEQ 244
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ ++ +G R R + +G A + + ++F ++ +P+ ++G +E GA T+ PD+
Sbjct: 331 LLFRALRDRLGFSRLRSAATGGAALGPDTFKFFRAMGVPLRTLYGQTETLGAFTLHKPDE 390
Query: 175 FKLDGVGRTIPGT-QTKIVDPDEEGNGEICLK 205
D G ++ + + +I DPD G GEI ++
Sbjct: 391 VDPDTTGVSMADSIEIEIRDPDINGVGEIVVR 422
>gi|262192691|ref|ZP_06050831.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
gi|262031430|gb|EEY50028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
Length = 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYHDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|51891842|ref|YP_074533.1| hypothetical protein STH704 [Symbiobacterium thermophilum IAM
14863]
gi|51855531|dbj|BAD39689.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 659
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 8/224 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E ++Y +VR + LG R + I+G N PEW ++L A AGG + G+Y +
Sbjct: 38 EYTWQDYLDHVRDFCLGLVSLGFRRGDKIAIVGDNRPEWVIAELAAQSAGGTSVGIYQDS 97
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISW 316
+ + SDA + VVED +Q++KIL+V+ PK++ +V Y+ K + P ++ +
Sbjct: 98 LAREMAYVIDHSDAVVVVVEDQEQVDKILEVRDLIPKVRYLVYYDPKGLRTYTDPWLLYF 157
Query: 317 DELMELGRAAPDESLDRVLETIATN---ECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
++ME+GR E +A + + YTSGT G K MLSH N+
Sbjct: 158 PQVMEMGREYGRRHPGLFEEMVAAGDGEDTAIICYTSGTTGHPKGAMLSHRNL-LAMGDT 216
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
IQ + +SFLPL+ I Q + ++V T+ F ++
Sbjct: 217 IQTVDPLTPDDDFLSFLPLAWIGEQMTALAMHLSVGFTVNFPEE 260
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L +L+ S VK +GL R + + +G A + ++ R++ +L + + +++G +E G
Sbjct: 333 YALGEFLVYSAVKDHLGLSRLKRAYTGGAALGPDVFRFYHALGVNLKQIYGQTEIVGIAV 392
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKL 221
+ DD + VG +PG + I P+ GEI L+ R V + + K+
Sbjct: 393 LHRDDDIRFHTVGTPLPGGEMAI-SPE----GEILLRS-----RAVFQGYYKM 435
>gi|395010936|ref|ZP_10394243.1| AMP-forming long-chain acyl-CoA synthetase [Acidovorax sp. CF316]
gi|394310963|gb|EJE48391.1| AMP-forming long-chain acyl-CoA synthetase [Acidovorax sp. CF316]
Length = 618
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A + LG ++ EW +DL + GG + G+Y T++ +
Sbjct: 60 VREIAGGLMALGFAPGDCASVLSSTNIEWVLADLAVLSCGGVSNGIYPTDAASQVHYLCE 119
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISWDELMELGR-- 324
S + VEDD+QL+K L+V+AQ P L+ IV ++ + + PG+IS L LGR
Sbjct: 120 DSRTCVLFVEDDEQLDKALEVRAQLPLLRKIVVFDMEGLRSLADPGIISLQALRALGRDW 179
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
A +L+R ++ + LVYTSGT G K M +H + + + Y L S
Sbjct: 180 NAQHAGALERRVQGCKPEDVAILVYTSGTTGKPKGAMHTHAALAYT---VRGYNTLISRT 236
Query: 384 LS--VISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ FLPL HIA + Y + + L F +
Sbjct: 237 EDDEAMCFLPLCHIAERMGGEYFSLYTGSRLNFVEN 272
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L RWL L V++ +G+ R R ++GAAPIS +L +++L+L +P+ EV+GM+E GA T
Sbjct: 345 FQLARWLALDNVRKLIGIHRARFLVTGAAPISPDLVKWYLALGVPMLEVWGMTETCGAAT 404
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHS 228
K +G + + VDP GEI ++ V K +L + +
Sbjct: 405 GVPASRIKPGSIGPAASYNEVR-VDP---ATGEIQVRG-----PNVFKGYLNQPEKTAET 455
Query: 229 VCIIGFNAPEWFYS-DLGAIYAGGF 252
+ G W ++ D+G I A G+
Sbjct: 456 ISPDG-----WLHTGDVGVIDADGY 475
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 418 NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQ 477
A +V QA +DR N + + ++I+KF L S EL PTMK+KR V +KY
Sbjct: 552 RAPEVQALIQAELDRVNTR-FARVEQIKKFFLLDTQLSAEDEELTPTMKLKRKLVQQKYA 610
Query: 478 SIIDKFY 484
+ I+ Y
Sbjct: 611 AQIEAMY 617
>gi|319896424|ref|YP_004134617.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3031]
gi|317431926|emb|CBY80272.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3031]
Length = 599
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 132/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIAILQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIKTGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGKPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|384101676|ref|ZP_10002713.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383840821|gb|EID80118.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 614
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 11/225 (4%)
Query: 188 QTKIVDPDE-----EGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T +DPD G+ + + ++Y + VR VA F LG+ R +V ++ N +++
Sbjct: 16 RTAAIDPDAIALRTVGDSQTLTWRQYSSQVREVAAGFAALGVRRGDTVALMMANRVDFYP 75
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA++ G + +Y T P A + L ++A + V E + +E+I + A ++ +
Sbjct: 76 VDVGALHVGATSFSIYNTLPPSAIAYVLGNAEAKVVVCE-AQYVERIRESGALLEQI-VV 133
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ E G ++ D++ LG +P+ D ++ ++ TL+YTSGT G K V
Sbjct: 134 IDAEAGIAPAGTLTLDQMKALG--SPEFDFDAAWRSVRPDDVATLIYTSGTTGNPKGVES 191
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM 406
+H + F A + +E + SF+P +HIA + +Y M
Sbjct: 192 THAALLFEAGAVCWILPIEFGD-RITSFMPSAHIADRMTALYFQM 235
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 49 AAQYPDQVALCQKQENGEWKKVTYKLQTTGVKRWIANY---AKSTSLQHYMAYLEKN--- 102
AA PD C+ G +V KL+ V+R +AN A+ +LQ + +
Sbjct: 251 AAALPD----CRPTIWGAVPRVWEKLKI-AVERAVANEPDDARRRALQWGLEVGARRIEL 305
Query: 103 ------VSEPYTYRLVRW--LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPI 154
V E + V+ ++L+ ++ +G D+ R ++SGAAPI + +F L + I
Sbjct: 306 LRVGLPVPEELEHEFVKAESMVLAPMRAELGFDKLRWAVSGAAPIPADTLAFFAGLGLQI 365
Query: 155 CEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG-NGEICLKEYEANVRT 213
E++GMSE + + D KL VG+ +PG ++ + E G + +K Y
Sbjct: 366 SEIWGMSELTCIASAAPADPAKLGTVGKIVPGMDMRVANDGELFVRGPLVMKGYRGEPAK 425
Query: 214 VAKA 217
A A
Sbjct: 426 TADA 429
>gi|394994435|ref|ZP_10387152.1| AMP-binding domain protein [Bacillus sp. 916]
gi|393804698|gb|EJD66100.1| AMP-binding domain protein [Bacillus sp. 916]
Length = 546
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R +AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDRLCRQIAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPELKTCERGRLRSKRYPFLRTVLYIGDKS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ WD L++ A D +LD ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 LPGMHRWDSLLDNAEAVTDAALDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSCDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|384567078|ref|ZP_10014182.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
glauca K62]
gi|384522932|gb|EIF00128.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
glauca K62]
Length = 609
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 6/214 (2%)
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
DE + + + +V VA+ LGL + I+ N PE DL A G
Sbjct: 37 DEPDSPTLSWAQVRDHVAAVARGLDDLGLRAGQRMMIMSPNRPEHLIVDLAAANLGAIPC 96
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDKPG 312
Y T S E + + S A I V+ +L + V + P L+ I+ ++ PD
Sbjct: 97 TAYLTLSSEQIRYVVNHSSAPIAVLAGADELARWQPVLDELPALRHIIVFDADATPDDRR 156
Query: 313 VISWDELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
+++ +L E G A ES +R+ + I ++ ++YTSGT G K V+LSH N +
Sbjct: 157 FLTYADLRERGAALHAESPHTFERLTDAIEPDDPLAMIYTSGTTGTPKGVVLSHHNAIYE 216
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
+ ++ LS IS+LPL+HIA + + IY
Sbjct: 217 SVA-VEALHGAPPHLSNISYLPLAHIAERVLSIY 249
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 16/138 (11%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L+ V++ +GLD+ ++ SGAA + E+ + + I E++G+SE GA T + F
Sbjct: 343 VLAPVRELLGLDKLVIASSGAAALPGEVLHFLAGFGVEIHELWGLSETTGAVTSNHAGAF 402
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN 235
+ VG+ I G + D +GE+ ++ + LG R +
Sbjct: 403 RAGSVGKPIAGVEVTTAD-----DGELLVR----------GPVVFLGYLREDGSIESATD 447
Query: 236 APEWFYS-DLGAIYAGGF 252
A WF + D+G+I GF
Sbjct: 448 ADGWFATGDIGSIDEDGF 465
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V Q A+D AN + ++ ++++++ L ++ +GEL PT+K+KR + +Y+S I+
Sbjct: 546 VRAEIQRAVDTAN-ERLARVEQVKRYHVLARAWTPESGELTPTLKLKRRIITSRYRSDIE 604
Query: 482 KFY 484
Y
Sbjct: 605 ALY 607
>gi|448739566|ref|ZP_21721578.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
gi|445799185|gb|EMA49566.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
Length = 653
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 13/246 (5%)
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R++ GT + DP E + +E ++ VR++A F LG+E + I + EW
Sbjct: 49 RSLAGTVIRRADPGEYVT--LSYEELQSIVRSLAAGFRDLGVESDDRIGIFSASRMEWAQ 106
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
+D + AG +Y +SP + L A +V+ +LE++L V+ +
Sbjct: 107 ADFALLAAGAVVTTVYKESSPRQVEYLLDDPGATGVIVDSRDRLERVLDVEDALDLEFVV 166
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVM 360
V + D+ GV + E+ E G A D + +R L +++ +L+YTSGT G K V
Sbjct: 167 VLDDISTDRDGVFTISEVYERGEQAFDRAAYERWLSERTSDDLASLIYTSGTTGKPKGVR 226
Query: 361 LSHDNITFNAACIIQYF--------KLESAALSVI--SFLPLSHIAAQTVDIYSVMTVAA 410
++H N N + + F L S + SFLPL+H+ + + + A
Sbjct: 227 MTHRNFRANINQLRKRFGDRPDKSADLPSVGRETVALSFLPLAHVFERLAGHFFLFASGA 286
Query: 411 TLWFAD 416
T+ +A+
Sbjct: 287 TVAYAE 292
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S VK+AMG + +SG +S EL R F +D+PI E +G++E A +V+ P+
Sbjct: 366 LVYSTVKEAMGGN-IEFFISGGGSLSPELARLFDGMDLPIYEGYGLTEAAPVVSVNPPEA 424
Query: 175 FKLDGVGRTIPGTQTKI 191
K +G + G +T++
Sbjct: 425 PKPGTLGPALTGVETRL 441
>gi|422911306|ref|ZP_16945932.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
gi|341631825|gb|EGS56702.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
Length = 601
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDVALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD +LE ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSLHQDRAPLDALLEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYRGATNCYLQD 252
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++L L+LSK++ +G R + G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQLADKLVLSKLRALLG-GRIKFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
>gi|417825702|ref|ZP_12472290.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
gi|340047187|gb|EGR08117.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
Length = 601
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRALLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|424852459|ref|ZP_18276856.1| long-chain fatty-acid-CoA ligase [Rhodococcus opacus PD630]
gi|356667124|gb|EHI47195.1| long-chain fatty-acid-CoA ligase [Rhodococcus opacus PD630]
Length = 614
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 188 QTKIVDPDE-----EGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T +DPD GN + + + Y + VR VA F LG+ R +V ++ N +++
Sbjct: 16 RTAAIDPDAIAIRTVGNSQTLTWRHYSSQVREVAAGFAALGVRRGDTVALMMANRVDFYP 75
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA++ G + +Y T P A L ++A + V E + +E+I + A ++ +
Sbjct: 76 VDVGALHVGATSFSIYNTLPPSAIAFVLGNAEAKVVVCE-AQYVERIRESGALLEQI-VV 133
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ E G ++ D++ LG +P+ D ++ ++ TL+YTSGT G K V
Sbjct: 134 IDAEAGIAPAGTLTLDQMKALG--SPEFDFDAAWRSVRPDDVATLIYTSGTTGNPKGVES 191
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM 406
+H + F A + +E + SF+P +HIA + +Y M
Sbjct: 192 THAALLFEAGAVCWILPIEFGD-RITSFMPSAHIADRMTALYFQM 235
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
++L+ ++ +G D R ++SGAAPI + +F L + I E++GMSE + + D
Sbjct: 326 MVLAPMRAELGFDELRWAVSGAAPIPADTLAFFAGLGLQISEIWGMSELTCIASAAPADP 385
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEG-NGEICLKEYE 208
KL VG+ +PG + ++ + E G + +K Y
Sbjct: 386 AKLGTVGKIVPGMEMRVANDGELFVRGPLVMKGYR 420
>gi|448330677|ref|ZP_21519956.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
gi|445611181|gb|ELY64941.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
Length = 652
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 17/230 (7%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E VRT++ F +LG+E V + EW SD + AG +YT++S
Sbjct: 64 ISYAEMRDIVRTLSAGFRELGVETGDRVGLFSNTRMEWAQSDFALLSAGAVVTTVYTSSS 123
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDE 318
P+ + L DA+ VVE+++ LE +L+V+ L+ IV + +G D+ +++ E
Sbjct: 124 PDQVRYLLDDPDADGVVVENEELLEDVLEVEDDL-DLEFIVSIDEIDGYDDRDDILTLGE 182
Query: 319 LMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ G D E+ + + ++ +L+YTSGT G K V LSH N N I + F
Sbjct: 183 VYARGEETFDLEAYEERIAETELDDLASLIYTSGTTGQPKGVQLSHRNFRSNVNGIRKRF 242
Query: 378 K-----------LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L+ +++ +S+LPL+H+ +T + + A + +A+
Sbjct: 243 APRPDKDDDVPVLDEESVA-MSYLPLAHVFERTAGHFVLFASGACVAYAE 291
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q +DR N ++ + I++FE +P +F+ L PTMK KR ++++++ +
Sbjct: 587 RVREYIQQEVDRVN-ENFEKHETIKQFELVPLEFTEENDMLTPTMKKKRRVILEQFEDRV 645
Query: 481 DKFY 484
D+ Y
Sbjct: 646 DRIY 649
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + +SG +S EL R + ++ +PI E +G++E + + + D
Sbjct: 366 LVFSSVREALG-GEIDLLISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVVSTNPQDA 424
Query: 175 FKLDGVGRTIPGTQTKI 191
K+ +G + K+
Sbjct: 425 VKVGTIGPPLANVDVKV 441
>gi|153826974|ref|ZP_01979641.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
gi|149739172|gb|EDM53454.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
Length = 601
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQVRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|384159161|ref|YP_005541234.1| AMP-binding protein [Bacillus amyloliquefaciens TA208]
gi|384164411|ref|YP_005545790.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|384168205|ref|YP_005549583.1| AMP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328553249|gb|AEB23741.1| AMP-binding domain protein [Bacillus amyloliquefaciens TA208]
gi|328911966|gb|AEB63562.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|341827484|gb|AEK88735.1| AMP-binding domain protein [Bacillus amyloliquefaciens XH7]
Length = 546
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDRLCRQTAKGLMKLGIEKGDHVAIWASNIPEWLAAQFATAKIGAVLITINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLTHSDVSALIIMDSYRQTSYVELVNKLIPELKTCERGRLRSKRYPFLQTVLYIGDQS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ WD L++ D LDR ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 PPGMHHWDALLKDAETVTDAELDRRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S+ I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSSDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|226186190|dbj|BAH34294.1| probable long-chain fatty-acid--CoA ligase FadD15 [Rhodococcus
erythropolis PR4]
Length = 603
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 8/257 (3%)
Query: 160 MSECAGAHTVSAPDDFK-LDGVGRTIPGTQTKIVDPDEEGNG--EICLKEYEANVRTVAK 216
M E + T + P+D +D V +V + GN ++ ++ A V VAK
Sbjct: 1 MPEFSAPQTFTIPEDASAVDSVFAFAKTKPAAVVYKRKVGNAWVDVTAGDFAAQVTAVAK 60
Query: 217 AFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANI 276
+ +G+++ V ++ EW D AGG +Y T++ E L S+A
Sbjct: 61 GLIAIGVKQGDRVGLMSATRFEWPLVDYAIWAAGGVTVPIYETSAAEQVRWILEDSEAID 120
Query: 277 CVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLE 336
+VE+D + V A P L+ + Q + GV+ +EL LG DE + +
Sbjct: 121 LIVENDTHAATVKDVAAAAPALRTVYQIDAAAAGKGVV--EELTALGADISDEDVHARVA 178
Query: 337 TIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---FKLESAALSVISFLPLS 393
+ ++ TL+YTSGT G K L+H N+ + I+ L++ + + FLPL+
Sbjct: 179 ALKASDPATLIYTSGTTGRPKGCQLTHSNLIAESKGILDSNLGTLLKTPGVRTLMFLPLA 238
Query: 394 HIAAQTVDIYSVMTVAA 410
H+ A+ V I S AA
Sbjct: 239 HVLARAVSIASFDAGAA 255
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q AID AN K +S+A+ I+KF LP DFS TGEL PTMK+KR V + + + I+K Y
Sbjct: 545 QDAIDEAN-KLVSHAEAIKKFRILPVDFSEDTGELTPTMKLKRNVVHESFAADIEKIY 601
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G +C++++SG AP+ L +F + + I E +G++E A
Sbjct: 331 HALFDKLVYSKLRAALG-GQCQLAISGGAPLGARLGHFFRGIGVTIYEGYGLTETTAAFA 389
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICL 204
V+ K+ VG+ + G +I + +GEI L
Sbjct: 390 VNTIGAQKVGSVGKPLAGNSVRIAE-----DGEILL 420
>gi|444337712|ref|ZP_21151647.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|443546395|gb|ELT56059.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
Length = 595
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I D +Q ++++ + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFAGDQEQYDQVIDIADECPKLIKIVAMKSTINLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + + TL+YTSGT G K VML + N+T Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDGKSLADLFTLIYTSGTTGEPKGVMLDYANLTHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QIDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ +KI++F LP FS E+ PT+K++R ++++Y+ +I+ Y+
Sbjct: 546 KELAGWEKIKRFTLLPQAFSTQLEEITPTLKLRRKVILQRYKELIEAMYN 595
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 79 VKRWIANYAKSTSLQHYMAYL-EKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + + + ++ + P Y L L+L K++ +G R R+ G
Sbjct: 291 LRQWIFNWAIAVGRKRFDTLAKQQKIGFPLKQQYALADKLVLGKLRALLG-GRIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFSFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE-EGNGEICLKEYEANVRTVAKAF 218
+E G + +K Y + A F
Sbjct: 408 NNEILVRGGMVMKGYYKKPQETADTF 433
>gi|418464834|ref|ZP_13035773.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans RhAA1]
gi|359756789|gb|EHK90946.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans RhAA1]
Length = 595
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I V D +Q +++L + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFVGDQEQYDQVLDIADECPKLIKIVAMKSTIHLQEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDDKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QVDDTDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 79 VKRWIANYAKSTSLQHYMAYL-EKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + +H+ A ++ + P Y L L+L K++ +G R R+ G
Sbjct: 291 LRQWIFNWAIAVGRKHFNALAKQQKIGFPLKQQYALADKLVLGKLRALLG-GRIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFNFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE-EGNGEICLKEY-----EANVRTVAKAFLKLG 222
+E G + +K Y E A FLK G
Sbjct: 408 NNEILVRGGMVMKGYYKKPQETADTFTADGFLKTG 442
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++I+ F LP FS E+ PT+K++R ++++Y+ +I+ Y+
Sbjct: 546 KELAGWEQIKCFTLLPQAFSTQLEEITPTLKLRRKVILQRYKELIEAMYN 595
>gi|149375942|ref|ZP_01893709.1| AMP-dependent synthetase and ligase [Marinobacter algicola DG893]
gi|149359822|gb|EDM48279.1| AMP-dependent synthetase and ligase [Marinobacter algicola DG893]
Length = 600
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+ Y R +GLE+ V II N EW + +G G G+Y T+ +
Sbjct: 42 RAYYERARHFGLGLRAMGLEKGGHVAIISENRVEWVIAQMGIGMVRGICVGVYPTSPWKE 101
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-----PDKPGVISWDEL 319
+ L SDA+I V ED +Q +K+L+ Q P+LK + + K P+ P +++++
Sbjct: 102 VAYVLEHSDASIVVCEDQEQTDKVLEAWPQLPQLKHAIAIDMKGLRYYPEPPA--AFEDI 159
Query: 320 MELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
GRA + +D +L+ ++ ++YTSG+ G K M+S N+ A +I+
Sbjct: 160 EARGRAFEKDHPGLVDELLDGQRMDDTALMIYTSGSTGRPKGAMISWGNLLAAAPGLIEL 219
Query: 377 FKLESAALSVISFLPLSHIAAQTV 400
+ + S +S+LPL H+A Q V
Sbjct: 220 LQADERG-SSLSYLPLCHVAEQAV 242
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 67 WKK----VTYKLQTTG-VKRWIANYA-KSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKV 120
W+K + K+Q TG V+R + N+A ++ S + + ++ E Y L WL+ +
Sbjct: 282 WEKLHSSIYIKIQETGRVRRALFNWAIRACSPMATKSRAQWSLKEKGLYSLCYWLVFRAL 341
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
+ +GL RC ++++GAAPIST + +F ++ IP+ EV+G +E G T DD L V
Sbjct: 342 QNFIGLRRCTIAMTGAAPISTGILEFFRTIGIPLLEVYGQTESTGVATAQPVDDVHLGTV 401
Query: 181 GRTIPGTQTKIVDPDE-EGNGEICLKEY----EANVRTVAKAFLKLG 222
G I G + K+ + +E G K Y EA T+ +L G
Sbjct: 402 GVAIAGVEVKLGEHNEIIMRGGSMFKGYYKSDEATASTLKDGWLHTG 448
>gi|115378538|ref|ZP_01465694.1| long-chain fatty-acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|115364460|gb|EAU63539.1| long-chain fatty-acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
Length = 614
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ + V+ ++ L G++ V + +W SDL A +Y++N
Sbjct: 39 EVTWGQVLQQVKELSAGLLAQGVKPGDRVALFANTTLQWVVSDLAISAARAVTVPIYSSN 98
Query: 261 SPEACLHCLVTSDANICVVEDD----KQLEKILKVK---AQCPKLKAIVQYEGKPDKPGV 313
+P+ C + L S+ + +V++D KQ+ ++ +++ A CP ++ +V +EG
Sbjct: 99 TPDECRYILNHSETTVLLVDNDEKDAKQIGRLSRIRQRLADCPTVRKVVVFEGPATGERE 158
Query: 314 ISWDELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
IS E++ G+ AA + + +A + +YTSGT G K V+L+H N + A
Sbjct: 159 ISLAEVLAQGKAEEAAHPSAFEERSRQVAVEDAWGFIYTSGTTGEPKGVILTHGNWAYEA 218
Query: 371 ACIIQYFKLESAALSVISFLPLSHIAAQTV 400
I Q L SV+ FLPL+H+ AQ V
Sbjct: 219 R-ITQALGLMLPQDSVMLFLPLAHVFAQVV 247
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLD---RCRVSLS 134
G+K + +A ++ A L+ ++ L R L+ +KV+ + R+ +S
Sbjct: 302 GLKGKLFRWAFRLFDEYTEAKLQGREYNSLSFTLARKLVFNKVRGTLSEKLGGNMRLFIS 361
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIV-D 193
G AP+S ++ +F L + E +G++E + V+ P+ K+ VG +PGT+ KI D
Sbjct: 362 GGAPLSRKIAYFFDLLGFKVLEGYGLTETSAPCNVNLPEKIKIGTVGPALPGTEIKIASD 421
Query: 194 PDEEGNGEICLKEYEANVRTVAKAF 218
+ G +K Y N A+A
Sbjct: 422 GEILVRGPCVMKGYYKNPTATAEAL 446
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 444 IQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
++KFE + ADF+ +GEL PT+KVKR F +KY +II K Y+
Sbjct: 567 LKKFEIMDADFTQESGELTPTLKVKRKFCSQKYATIIGKLYE 608
>gi|260582084|ref|ZP_05849879.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
gi|260094974|gb|EEW78867.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
Length = 599
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 42/311 (13%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-----DKPGVIS 315
+ + L +D I V D +Q ++ L++ CPKL+ IV KP P +
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM--KPTIQLQQDPLSCT 151
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
W+ ++ G A L + L ++ T++YTSGT G K VML + N+
Sbjct: 152 WESFIKTGSNAQQNELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA-------- 203
Query: 376 YFKLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----V 422
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 204 -HQLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEI 262
Query: 423 YKATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFV 472
A+ R A L + A K+++ F ++I G+ ++ PF+
Sbjct: 263 RPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFL 319
Query: 473 VKKYQSIIDKF 483
+KK ++ DK
Sbjct: 320 LKKQFALADKL 330
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|238752418|ref|ZP_04613895.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
gi|238709351|gb|EEQ01592.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
Length = 599
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
EG ++ ++ + +V ++ A L LG+ + I N+ W DL + G + +
Sbjct: 33 EGEKQLSWQQVDTHVTQISAALLSLGVAIQERIGIFANNSMAWSLVDLAILQLRGVSVPL 92
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISW 316
Y TN+ + + +D I V Q + +K+K+ CP+L I+ + D G
Sbjct: 93 YATNTTAQAAYVVNDADVRILFVGGQTQFDVAIKLKSLCPQLIKIIVLDPLVDLRGCEFA 152
Query: 317 DELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
L + + A L ++ N+ TL+YTSGT G K VML + N+
Sbjct: 153 QHLADFEQQPDAVQQHLLSARIDACDLNDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLH 212
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q L + +S +SFLPLSH+ + Y + T A ++ +D N ++
Sbjct: 213 DQRLTLTTDDIS-LSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVR 259
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP F++ TGEL PTMK++R ++++YQ+ ID Y
Sbjct: 549 KELAKFEQVKRFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDSMY 597
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L L+LSK++ +G + R + A + + +F ++ I I +GM+E +
Sbjct: 327 YKLANRLVLSKLRGILG-GKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVS 385
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLG 222
DF+ +G+ +PG + ++ +E + G I ++ Y + A++F + G
Sbjct: 386 CWEEKDFRFGSIGKPLPGIEVRLGAENEIQVRGPIVMRGYFNKPQETAESFTEDG 440
>gi|33596657|ref|NP_884300.1| long-chain fatty-acid--CoA ligase [Bordetella parapertussis 12822]
gi|33601273|ref|NP_888833.1| long-chain fatty-acid--CoA ligase [Bordetella bronchiseptica RB50]
gi|33573358|emb|CAE37342.1| putative long-chain fatty-acid--CoA ligase [Bordetella
parapertussis]
gi|33575708|emb|CAE32786.1| putative long-chain fatty-acid--CoA ligase [Bordetella
bronchiseptica RB50]
Length = 621
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA GLE V II N EW + +GA G G+Y T+ + L ++
Sbjct: 63 VALGLRAAGLEPGGKVAIIAENRLEWLLAQMGAGVLGAVPVGVYCTSPAAEVGYVLEHAE 122
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDELMELGR-- 324
++ V ED +Q +K+L+V A+ P L+ IV E K ++ +IS+ EL G
Sbjct: 123 VDMVVCEDQEQTDKVLEVAARLPGLRRIVVMETKGLRNHAEAERARMISFAELEARGAQC 182
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
AA L++ L+ ++ ++YTSG+ G K M+S+ N+ A I +++ +
Sbjct: 183 GAAEQARLEQALDAQTLDDVGLMIYTSGSTGKPKGAMISYRNMRGVAPGIADRLDMDAGS 242
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL H+A Q + + + + + + F +
Sbjct: 243 VH-LSYLPLCHVAEQMLSTFVPVYLGSQVNFGE 274
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 25/174 (14%)
Query: 67 WKK----VTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVR-W---LI 116
W+K ++ K+Q +G ++RW+ YA++ L+ +LE + + + RLV W LI
Sbjct: 298 WEKLHAAISIKMQESGRLRRWL--YARA--LRGCAPFLELSRARYGWRERLVYGWHYALI 353
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L + +GL R +V+++GAAPI E+ RYF +L IP+ EV+G++E G PD +
Sbjct: 354 LRALHNFVGLRRVKVAMTGAAPIPPEVLRYFRTLGIPLIEVYGLTESTGMIFGQHPDRVR 413
Query: 177 LDGVGRTIPGTQTKIVDPDEEG----NGEICLKEY----EANVRTVAKAFLKLG 222
+ VG G Q ++ E+G GE+ Y +A+ TV +L G
Sbjct: 414 VGTVGEPTLGVQARV---GEQGELLVRGEMVFHGYYRNPQASADTVRDGWLHTG 464
>gi|444379072|ref|ZP_21178257.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
gi|443676909|gb|ELT83605.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
Length = 598
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 10/239 (4%)
Query: 190 KIVDPDEEGN--GEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAI 247
KI ++GN GE+ +++ + +KA L GL + I N EW +D+ A+
Sbjct: 21 KIALRFQQGNTWGEMSWRQFGERIDAASKAMLVSGLAVQDKIGIFANNCAEWSIADIAAL 80
Query: 248 YAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK 307
+Y TN+ + + L + I V D Q + + + A CP L+ IV +
Sbjct: 81 QVRCVPVPIYPTNTADQAAYILRDASVRILFVGDQSQADAAMSISASCPALEKIVSFAEN 140
Query: 308 PDKPGV---ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHD 364
D G SW+ ++ ++ + + + ++ TL+YTSGT G K VML +
Sbjct: 141 VDFAGHEMGQSWEMFLQTANDNVEQEMQARIADASMSDLMTLIYTSGTTGEPKGVMLDYA 200
Query: 365 NITFNAACIIQYFKLESAALSVIS--FLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
N+ AA I + K+ + + +S FLPLSH+ + Y + A + ++ NA++
Sbjct: 201 NV---AAQIESHDKVLGISENEVSLAFLPLSHVFERCWSFYVLHHGATNCYLSNTNAIR 256
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP++FS+ GEL PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAKFEQVKKFTLLPSEFSMAQGELTPTLKLRRKVILERYKKQIEAMY 594
>gi|427815083|ref|ZP_18982147.1| putative long-chain fatty-acid--CoA ligase [Bordetella
bronchiseptica 1289]
gi|410566083|emb|CCN23643.1| putative long-chain fatty-acid--CoA ligase [Bordetella
bronchiseptica 1289]
Length = 621
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA GLE V II N EW + +GA G G+Y T+ + L ++
Sbjct: 63 VALGLRAAGLEPGGKVAIIAENRLEWLLAQMGAGVLGAVPVGVYCTSPAAEVGYVLEHAE 122
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDELMELGR-- 324
++ V ED +Q +K+L+V A+ P L+ IV E K ++ +IS+ EL G
Sbjct: 123 VDMVVCEDQEQTDKVLEVAARLPGLRRIVVMETKGMRNHAEAERARMISFAELEARGAQC 182
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
AA L++ L+ ++ ++YTSG+ G K M+S+ N+ A I +++ +
Sbjct: 183 GAAEQARLEQALDAQTLDDVGLMIYTSGSTGKPKGAMISYRNMRGVAPGIADRLDMDAGS 242
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL H+A Q + + + + + + F +
Sbjct: 243 VH-LSYLPLCHVAEQMLSTFVPVYLGSQVNFGE 274
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 25/174 (14%)
Query: 67 WKK----VTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVR-W---LI 116
W+K ++ K+Q +G ++RW+ YA++ L+ +LE + + + RLV W LI
Sbjct: 298 WEKLHAAISIKMQESGRLRRWL--YARA--LRGCAPFLELSRARYGWRERLVYGWHYALI 353
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L + +GL R +V+++GAAPI E+ RYF +L IP+ EV+G++E G PD +
Sbjct: 354 LRALHNFVGLRRVKVAMTGAAPIPPEVLRYFRTLGIPLIEVYGLTESTGMIFGQHPDRVR 413
Query: 177 LDGVGRTIPGTQTKIVDPDEEG----NGEICLKEY----EANVRTVAKAFLKLG 222
+ VG G Q ++ E+G GE+ Y +A+ TV +L G
Sbjct: 414 VGTVGEPTLGVQARV---GEQGELLVRGEMVFHGYYRNPQASADTVRDGWLHTG 464
>gi|432340022|ref|ZP_19589544.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
gi|430774903|gb|ELB90467.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
Length = 614
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 11/225 (4%)
Query: 188 QTKIVDPDE-----EGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T +DPD G+ + + ++Y + VR VA F LG+ R +V ++ N +++
Sbjct: 16 RTAAIDPDAIALRTVGDSQTLTWRQYSSQVREVAAGFAALGVRRGDTVALMMANRVDFYP 75
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA++ G + +Y T P A + L ++A + V E + +E+I + A ++ +
Sbjct: 76 IDVGALHVGATSFSIYNTLPPSAIAYVLGNAEAKVVVCE-AQYVERIRESGALLEQI-VV 133
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ E G ++ D++ LG +P+ D ++ ++ TL+YTSGT G K V
Sbjct: 134 IDAEAGIAPAGTLTLDQMKALG--SPEFDFDAAWRSVRPDDVATLIYTSGTTGNPKGVES 191
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM 406
+H + F A + +E + SF+P +HIA + +Y M
Sbjct: 192 THAALLFEAGAVCWILPIEFGD-RITSFMPSAHIADRMTALYFQM 235
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 49 AAQYPDQVALCQKQENGEWKKVTYKLQTTGVKRWIANY---AKSTSLQHYMAYLEKN--- 102
AA PD C+ G +V KL+ V+R +AN A+ +LQ + +
Sbjct: 251 AAALPD----CRPTIWGAVPRVWEKLKI-AVERAVANEPDDARRRALQWGLEVGARRIEL 305
Query: 103 ------VSEPYTYRLVRW--LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPI 154
V E + V+ ++L+ ++ +G D+ R ++SGAAPI + +F L + I
Sbjct: 306 LRVGLPVPEELEHEFVKAESVVLAPMRAELGFDKLRWAVSGAAPIPADTLAFFAGLGLQI 365
Query: 155 CEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG-NGEICLKEYEANVRT 213
E++GMSE + + D KL VG+ +PG ++ + E G + +K Y
Sbjct: 366 SEIWGMSELTCIASAAPADPAKLGTVGKIVPGMDMRVANDGELFVRGPLVMKGYRGEPAK 425
Query: 214 VAKA 217
A A
Sbjct: 426 TADA 429
>gi|56962365|ref|YP_174090.1| AMP-binding protein [Bacillus clausii KSM-K16]
gi|56908602|dbj|BAD63129.1| long-chain-fatty-acid--CoA ligase [Bacillus clausii KSM-K16]
Length = 545
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 22/253 (8%)
Query: 177 LDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNA 236
L+ + P T+ +V PD + + K++ + R +AK F++LG++R + + N
Sbjct: 12 LERMAEESPSTEA-LVYPDR--HLRLSYKDFNHSCRQLAKGFMQLGIQRGEHMAVWATNC 68
Query: 237 PEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQ----LEKILKV- 291
PEW + G + T + L SD +V + + LE + ++
Sbjct: 69 PEWVTTQFATGKMGAVLVTVNTNYQQSELAYLLKQSDTTTLLVMEGYKGTSYLEMLYRLI 128
Query: 292 ------------KAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIA 339
A+ P LK IV Y GK KPG+ +D+++++G D +LDR++ +
Sbjct: 129 PELQTAEPGKLESAEFPYLKHIV-YLGKERKPGMWLYDDIVKMGDQVTDAALDRLMSELD 187
Query: 340 TNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQT 399
++ + YTSGT G K VML+H N+ NA+ I +L I +P H
Sbjct: 188 VDDAINMQYTSGTTGFPKGVMLTHRNLIHNASNIAACMELSQQDRLCIP-VPFFHCFGCV 246
Query: 400 VDIYSVMTVAATL 412
+ + ++VAAT+
Sbjct: 247 LGTLACVSVAATM 259
>gi|372209317|ref|ZP_09497119.1| AMP-dependent synthetase/ligase [Flavobacteriaceae bacterium S85]
Length = 610
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 20/245 (8%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAA 254
NGE I ++Y + V++ L LG+++ + +I N EW D+ + G
Sbjct: 46 NGEWISISTQQYIESYNNVSRGLLALGIQKNDKIAVISTNNRTEWNILDMAILQTGAQNV 105
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T S + + L S A C V D + L K+ KVK LK + ++ GV
Sbjct: 106 PIYPTISSKDYEYILNHSGATYCFVSDVEILNKVEKVKDNT-SLKDVYSFD---QIEGVK 161
Query: 315 SWDELMELGRAAP-DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
W E+ LG+ + DE L+ I + + TL+YTSGT G K VMLSH N+ N
Sbjct: 162 HWTEIENLGKHSDVDELLESRKNEIKSTDLATLIYTSGTTGNPKGVMLSHQNLVSNTVDC 221
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRA 433
+ +SFLP+ H+ + + L+ N++++Y A
Sbjct: 222 TPRVPVAKGTGKALSFLPVCHVFERMI-----------LYLYQYNSIEIYFAESIEAMSQ 270
Query: 434 NLKSI 438
NLK +
Sbjct: 271 NLKEV 275
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 107 YTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA 166
+ ++ R LI SK K+A+G V +SG+A + L R F + +PI E +G++E +
Sbjct: 331 FQLKIARKLIFSKWKEALG-GNLEVLVSGSAALQPRLARVFAAAGMPILEGYGLTETSPV 389
Query: 167 HTVSAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V+ + FK+ VG+ I KI + +GEI +K
Sbjct: 390 IAVNDIKNKAFKIGTVGKPIQNQTVKIAE-----DGEILVK 425
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++I++FE P ++SI G L PT+K+KR +++ Y + K Y
Sbjct: 563 EQIKRFELTPDEWSIEAGHLTPTLKMKRRIILELYADLYKKIY 605
>gi|310822393|ref|YP_003954751.1| long-chain-fatty-acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|309395465|gb|ADO72924.1| long-chain-fatty-acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
Length = 620
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ + V+ ++ L G++ V + +W SDL A +Y++N
Sbjct: 45 EVTWGQVLQQVKELSAGLLAQGVKPGDRVALFANTTLQWVVSDLAISAARAVTVPIYSSN 104
Query: 261 SPEACLHCLVTSDANICVVEDD----KQLEKILKVK---AQCPKLKAIVQYEGKPDKPGV 313
+P+ C + L S+ + +V++D KQ+ ++ +++ A CP ++ +V +EG
Sbjct: 105 TPDECRYILNHSETTVLLVDNDEKDAKQIGRLSRIRQRLADCPTVRKVVVFEGPATGERE 164
Query: 314 ISWDELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
IS E++ G+ AA + + +A + +YTSGT G K V+L+H N + A
Sbjct: 165 ISLAEVLAQGKAEEAAHPSAFEERSRQVAVEDAWGFIYTSGTTGEPKGVILTHGNWAYEA 224
Query: 371 ACIIQYFKLESAALSVISFLPLSHIAAQTV 400
I Q L SV+ FLPL+H+ AQ V
Sbjct: 225 R-ITQALGLMLPQDSVMLFLPLAHVFAQVV 253
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLD---RCRVSLS 134
G+K + +A ++ A L+ ++ L R L+ +KV+ + R+ +S
Sbjct: 308 GLKGKLFRWAFRLFDEYTEAKLQGREYNSLSFTLARKLVFNKVRGTLSEKLGGNMRLFIS 367
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIV-D 193
G AP+S ++ +F L + E +G++E + V+ P+ K+ VG +PGT+ KI D
Sbjct: 368 GGAPLSRKIAYFFDLLGFKVLEGYGLTETSAPCNVNLPEKIKIGTVGPALPGTEIKIASD 427
Query: 194 PDEEGNGEICLKEYEANVRTVAKAF 218
+ G +K Y N A+A
Sbjct: 428 GEILVRGPCVMKGYYKNPTATAEAL 452
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 444 IQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
++KFE + ADF+ +GEL PT+KVKR F +KY +II K Y+
Sbjct: 573 LKKFEIMDADFTQESGELTPTLKVKRKFCSQKYATIIGKLYE 614
>gi|154686271|ref|YP_001421432.1| AMP-binding protein [Bacillus amyloliquefaciens FZB42]
gi|42491132|emb|CAE11269.1| YngI protein [Bacillus amyloliquefaciens FZB42]
gi|154352122|gb|ABS74201.1| YngI [Bacillus amyloliquefaciens FZB42]
Length = 546
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDRLCRQTAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLAHSDVSALIIMDSYRQTSYVEIVNKLIPELKTCERGRLRSKRYPFLRTVLYIGDKS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ WD L++ A D +LD ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 PPGMHRWDSLLDNAEAVTDATLDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S+ I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSSDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|448356428|ref|ZP_21545161.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
gi|445653461|gb|ELZ06332.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
Length = 671
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E VR +A F LG+E V I EW +D + AG +YT++S
Sbjct: 64 ISYAEMRDIVRNLAAGFRALGVESGDRVGIFSNTRMEWAQTDFALLGAGAVVTTVYTSSS 123
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPK--LKAIVQYEGKPDKPGVISWDEL 319
P+ + L DA+ VVE+ + LE++L V+ + + +I + +G D+ +++ EL
Sbjct: 124 PDQVSYLLDDPDADGVVVENQELLERVLAVEDELALEFIVSIDELDGYDDREDILTLAEL 183
Query: 320 MELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ G A DE + ++ ++ +L+YTSGT G K V L+H N N I + F
Sbjct: 184 HDRGAGAFDEDAYQEWVDEPEMDDLASLIYTSGTTGKPKGVQLTHSNFRSNVNQIRKRFA 243
Query: 379 ----------LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ + +S+LPL+H+ +T + + A + +A+
Sbjct: 244 PRPDRDDDVPVIDSESQAMSYLPLAHVFERTAGHFLLFASGACVAYAEN 292
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q +DRAN + + I++FE +P +F+ L PTMK KR ++ ++++ +
Sbjct: 606 RVREYVQREVDRAN-EDFEKHETIKQFELVPQEFTEENEMLTPTMKKKRRVIMNRFENRV 664
Query: 481 DKFYD 485
D+ YD
Sbjct: 665 DRIYD 669
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + + +SG +S EL R + ++ +PI E +G++E + V+ P++
Sbjct: 366 LVFSTVREALGGE-IEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVVAVNPPEE 424
Query: 175 FKLDGVGRTI 184
K+ +G T+
Sbjct: 425 PKIGTIGPTV 434
>gi|448354784|ref|ZP_21543539.1| AMP-dependent synthetase and ligase [Natrialba hulunbeirensis JCM
10989]
gi|445637115|gb|ELY90271.1| AMP-dependent synthetase and ligase [Natrialba hulunbeirensis JCM
10989]
Length = 666
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E VR +A F LG+E V I EW +D + A +YT++S
Sbjct: 64 ISYAEMRDIVRNLAAGFRDLGVESGDRVGIFSNTRMEWAQTDFALLSASAVVTTVYTSSS 123
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPK--LKAIVQYEGKPDKPGVISWDEL 319
P+ + L DA+ VVE+ LE++L+V+ + + +I + +G D+ +++ EL
Sbjct: 124 PDQVSYLLDDPDADGVVVENQDLLERVLEVEDELALEFIVSIDELDGYDDRDDILTLAEL 183
Query: 320 MELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ G A DE + ++ A ++ +L+YTSGT G K V L+H N N I + F
Sbjct: 184 HDRGAGAFDEDAYQEWVDEPAMDDLASLIYTSGTTGKPKGVQLTHSNFRSNVNQIRKRFA 243
Query: 379 ----------LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ + +S+LPL+H+ +T + + A + +A+
Sbjct: 244 PRPDRDDDVPVIDSDCQAMSYLPLAHVFERTAGHFLLFASGACVAYAEN 292
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q +DRAN + + I++FE +P +F+ L PTMK KR ++ +++ +
Sbjct: 601 RVREYVQQEVDRAN-EDFEKHETIKQFELVPQEFTEENEMLTPTMKKKRRVIMDRFEDRV 659
Query: 481 DKFYD 485
D+ YD
Sbjct: 660 DRIYD 664
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + + +SG +S EL R + ++ +PI E +G++E + V+ P++
Sbjct: 366 LVFSTVREALGGE-IEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVVAVNPPEE 424
Query: 175 FKLDGVGRTIPGTQTKI 191
K+ +G T+ I
Sbjct: 425 PKIGTIGPTVTDVDISI 441
>gi|379729826|ref|YP_005322022.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
gi|378575437|gb|AFC24438.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
Length = 607
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
V V+ L++G++ + +I +N PEW DLG G +Y T SP+ ++
Sbjct: 44 VNKVSWGLLQMGMKPGDKIALISYNNRPEWNIMDLGMQQIGVINVPVYPTISPDDYVYIF 103
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-----EGKPDKPG--VISWDELMEL 322
+ VV L+K+ ++ P L+AI + +G+ D G V W+ +
Sbjct: 104 NDATIKYAVVGHGDLLDKVRTAQSDIPSLQAIFTFDEADAQGQVDANGQEVSFWEHIW-- 161
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G + + + I + T++YTSGT G K VMLSH+NI N ++ + L+
Sbjct: 162 GENPNMDIIQAHKDKIKAEDLATIIYTSGTTGKPKGVMLSHNNIATNVRDVLPFIPLQPQ 221
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
++ +SFLPL H+ +TV YS M A +++A
Sbjct: 222 DIA-LSFLPLCHVFERTV-TYSYMAKGAQIFYA 252
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV QA ++R N + S ++I+KF +P + + TGEL PTMK+KR ++ Y+ I
Sbjct: 544 KVLAYFQAVVNRYNPR-FSKVEQIKKFHLVPTAWGVETGELTPTMKLKRRVILANYEDAI 602
Query: 481 DKFY 484
+K Y
Sbjct: 603 EKLY 606
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 67 WKKVTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMG 125
++K+ K+Q G +K I N+A + ++ + + E +++ L+ SKV+ +G
Sbjct: 281 YEKMMLKVQAEGGLKEKIFNWALGLTEKYDFDWQAAGL-EAIKWKIADKLVFSKVRDRLG 339
Query: 126 LDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK--LDGVGRT 183
R + ++GAA + + F ++ +PI E +G++E + A +++ + ++ + VG
Sbjct: 340 -GRLKGIVTGAAACPPRMTQLFSAVGVPIREGYGLTETSPAISINIFEPYQAMIGSVGPI 398
Query: 184 IPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS- 242
+P Q KI D G G E V + + +G R FN WF +
Sbjct: 399 LPSVQVKIDQDDSYGPG-------EGEVLVKGNSVM-MGYYRKEDKTAEVFNEEGWFLTG 450
Query: 243 DLGAI 247
D+G I
Sbjct: 451 DIGKI 455
>gi|325677429|ref|ZP_08157093.1| AMP-binding family protein [Rhodococcus equi ATCC 33707]
gi|325551676|gb|EGD21374.1| AMP-binding family protein [Rhodococcus equi ATCC 33707]
Length = 615
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E VR +A + LG++ V + EW +DL + AG +Y T +
Sbjct: 53 VTWSEVGQRVRRLAAGLIALGVQSEQRVALASATRYEWVLADLAVMCAGAATTTVYPTTT 112
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-PDKPGVISWDELM 320
+ S + I V EDD QL K+ + + + P + +V +G PD VI +DEL
Sbjct: 113 ASDVAFIVANSGSRIVVAEDDAQLAKLREHREEIPDVARVVLLDGTVPDDDWVIGFDELA 172
Query: 321 ELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
LG E D V E IA + TL+YTSGT G K V L H T+ AA I
Sbjct: 173 ALGERLLAERSDVVDERIAGISPDSLATLIYTSGTTGRPKGVRLPHSAWTYEAAAIDATG 232
Query: 378 KLESAALSVISFLPLSHI 395
L++ L + +LPLSH+
Sbjct: 233 ILDADDLQYL-WLPLSHV 249
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 32/185 (17%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNV---SEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
GVK I ++A L A N + Y + L+ K++ G R + +S
Sbjct: 309 GVKEKIFDWAMGVGLAASKARQSGNSLSRMQKAQYAIADRLVFQKIRDRFG-GRLKFFIS 367
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G+A + ++ ++F ++ I + E +G+SE + A V+ P ++ VG IPGT KI +
Sbjct: 368 GSAALDRDVAQWFDAVGIVVLEGYGLSETSAASLVNRPSAYRFGTVGWPIPGTDVKIAE- 426
Query: 195 DEEGNGEICLK------EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAI 247
+GEI +K Y N + A+A G WF++ D+G +
Sbjct: 427 ----DGEILIKGPGVMSGYHENPQATAEALEPDG----------------WFHTGDIGTV 466
Query: 248 YAGGF 252
A GF
Sbjct: 467 DANGF 471
>gi|229817557|ref|ZP_04447839.1| hypothetical protein BIFANG_02820 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785346|gb|EEP21460.1| hypothetical protein BIFANG_02820 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 617
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 13/230 (5%)
Query: 195 DEEGN-GEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
DEEG +E+ V +AK + G+ + +V II EW D+ + G
Sbjct: 53 DEEGRWHSFTAREFRQKVIDIAKGLIGWGITKGDAVSIIARTCWEWTALDMAIMAVGAIT 112
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y TNS + + S + + +DD Q +KI +K + P L+ + E G
Sbjct: 113 VPVYETNSAQQIRNIFNDSKVALAIAQDDTQRDKIESIKDEAPSLREVFMMEA-----GA 167
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
+ D ++ G D+ + + T+VYTSG+ G K V LSH N F
Sbjct: 168 V--DAIIAFGTDVSDKEFWDRKNAVHGDALATIVYTSGSTGTPKGVELSHGNFAFLCLSA 225
Query: 374 IQYFK--LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
QY +++ ++ FLPLSH+ A+ + S+++ A TL +++K
Sbjct: 226 KQYMPGVVDAPGRRLLLFLPLSHVFARYM---SLLSYAGTLTLGLSSSMK 272
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 36/148 (24%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ G + + +++G AP+ EL +F + + + E +GM+E G VS P+D
Sbjct: 347 LVYKKIRTIFGPN-AQCAITGGAPMDAELSHFFNGIGMRLLEGYGMTETCGPVCVSLPED 405
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF 234
++ +G+ + G I + +GE+C+ L + YH
Sbjct: 406 NRIGTIGKPLNGVTVGIAE-----DGELCISG-------------SLVCKGYH------- 440
Query: 235 NAPE---------WFYS-DLGAIYAGGF 252
N PE W ++ DLG+I GF
Sbjct: 441 NQPEVTEQQITDGWLHTGDLGSISEDGF 468
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 416 DKNALK----VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPF 471
D+ AL V+ + I+ AN + +S A+ I+KFE LP +F+ G L P++K +R
Sbjct: 540 DREALAKNPIVHAEVERVINAAN-EGVSRAESIRKFEILPDEFTEANGMLTPSLKTRRVQ 598
Query: 472 VVKKYQSIID 481
++ Y+ +ID
Sbjct: 599 IINHYRELID 608
>gi|429505407|ref|YP_007186591.1| AMP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429486997|gb|AFZ90921.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 546
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDQLCRQTAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLAHSDVSALIIMDSYRQTSYVEIVNKLIPELKTCERGRLRSKRYPFLRTVLYIGDKS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ WD L++ A D +LD ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 PPGMHRWDSLLDNAEAVTDAALDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S+ I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSSDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|311064219|ref|YP_003970944.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium bifidum PRL2010]
gi|310866538|gb|ADP35907.1| FadD Long-chain-fatty-acid--CoA ligase [Bifidobacterium bifidum
PRL2010]
Length = 678
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
E A++R+VAK L GL++ V + + W +D + GG A +Y T+S E
Sbjct: 124 NETLADIRSVAKGLLHYGLKKGDGVAFMCRTSYAWDVTDAAIMACGGVLATIYDTDSAEQ 183
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + +VE +K +CP L+ I+ E +E+ G
Sbjct: 184 IRNIVNNSDARLLIVETADMRDKAEGAIEECPSLETILCIE-------TGGLEEIKAYGA 236
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
A DE LD +++I + C++VYTSG+ A K V ++H++ A + Y L +
Sbjct: 237 AVSDEELDERIDSIKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYMPDLLHNK 296
Query: 383 ALSVISFLPLSHIAAQTVD 401
SV+ FLP +H A+ ++
Sbjct: 297 KNSVLLFLPQAHSFARAIN 315
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V Q +D+AN + +S A+ ++KF LP +FS G L +MKV RP V+++Y ++++
Sbjct: 612 VRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFSQENGLLTASMKVIRPKVIRRYATLLN 670
>gi|410472819|ref|YP_006896100.1| long-chain fatty-acid--CoA ligase [Bordetella parapertussis Bpp5]
gi|408442929|emb|CCJ49501.1| putative long-chain fatty-acid--CoA ligase [Bordetella
parapertussis Bpp5]
Length = 621
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA GLE V II N EW + +GA G G+Y T+ + L ++
Sbjct: 63 VALGLRAAGLEPGGKVAIIAENRLEWLLAQMGAGVLGAVPVGVYCTSPAAEVGYVLEHAE 122
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDELMELGR-- 324
++ V ED +Q +K+L+V A+ P L+ IV E K ++ +IS+ EL G
Sbjct: 123 VDMVVCEDQEQTDKVLEVAARLPGLRRIVVMETKGLRNHAEAERARMISFAELEARGAQC 182
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
AA L++ L+ ++ ++YTSG+ G K M+S+ N+ A I +++ +
Sbjct: 183 GAAEQARLEQALDAQTLDDVGLMIYTSGSTGKPKGAMISYRNMRGVAPGIADRLDMDAGS 242
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL H+A Q + + + + + + F +
Sbjct: 243 VH-LSYLPLCHVAEQMLSTFVPVYLGSQVNFGE 274
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 25/174 (14%)
Query: 67 WKK----VTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVR-W---LI 116
W+K ++ K+Q +G ++RW+ YA++ L+ +LE + + + RLV W LI
Sbjct: 298 WEKLHAAISIKMQESGRLRRWL--YARA--LRGCAPFLELSRARYGWRERLVYGWHYALI 353
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L + +GL R +V+++GAAPI E+ YF +L IP+ EV+G++E G PD +
Sbjct: 354 LRALHNFVGLRRVKVAMTGAAPIPPEVLCYFRTLGIPLIEVYGLTESTGMIFGQHPDRVR 413
Query: 177 LDGVGRTIPGTQTKIVDPDEEG----NGEICLKEY----EANVRTVAKAFLKLG 222
+ VG G Q ++ E+G GE+ Y +A+ TV +L G
Sbjct: 414 VGTVGEPTLGVQARV---GEQGELLVRGEMVFHGYYRNPQASADTVRDGWLHTG 464
>gi|417846422|ref|ZP_12492429.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
gi|341952560|gb|EGT79085.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
Length = 608
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 130/307 (42%), Gaps = 34/307 (11%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 42 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CP+L+ IV + P +W+
Sbjct: 102 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPELQKIVAMKSTIQLQQAPLSCTWE 161
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+E G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 162 NFIETGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA-------HQL 214
Query: 378 KLESAALSV------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYKAT 426
+ AL+V +SFLP SHI + Y + A + D N ++ +
Sbjct: 215 ETHDLALNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRPTL 274
Query: 427 QAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVKKY 476
A+ R A L + A K+++ F ++I G+ ++ PF++KK
Sbjct: 275 MCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLKKQ 331
Query: 477 QSIIDKF 483
++ DK
Sbjct: 332 FALADKL 338
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 420 LKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSI 479
LK+++ AI K +++ ++++KF L FSI GE+ PT+K++R ++++Y+
Sbjct: 542 LKMFEQRINAIQ----KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQ 597
Query: 480 IDKFYD 485
I+ Y+
Sbjct: 598 IEDMYN 603
>gi|167856072|ref|ZP_02478815.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219871804|ref|YP_002476179.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
gi|167852821|gb|EDS24092.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219692008|gb|ACL33231.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
Length = 595
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ + ++ + + A + ++ + I N P W +D GA+ A A +Y TN
Sbjct: 35 EMSWQTFQQEIDRFSYALIAQHIDIQDKIGIFANNMPRWTIADFGAMQARAVAVPIYATN 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + + +D I V D +QL+++ ++ CP+L IV + D P W+
Sbjct: 95 TAKQVEYIVNDADIKILFVGDQEQLDQVCQIANNCPQLMKIVAMKANMDLRDLPNACYWE 154
Query: 318 ELMELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNIT--FNAACII 374
+ +++ P+E+ ++ L + ++ TL+YTSGT G K VML + N+ NA +
Sbjct: 155 DFLDV---VPNEAEFEKRLNSKQLSDLFTLIYTSGTTGEPKGVMLDYANLAHQLNAHDLA 211
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +L SFLPLSHI + Y A + D N ++
Sbjct: 212 LNVNEDDVSL---SFLPLSHIFERAWVAYVFHRGATNCYLEDTNHVR 255
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K + + ++++KF LP FS E+ PT+K++R ++++Y+ I++ Y+
Sbjct: 541 KELPSFEQVKKFTLLPQAFSTAMEEITPTLKLRRKVIMQRYREQIEEMYN 590
>gi|386401538|ref|ZP_10086316.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
WSM1253]
gi|385742164|gb|EIG62360.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
WSM1253]
Length = 643
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 196 EEGNGEICLKE-------------YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
E GN EI L+E Y+ VR A ++LGL R + IIG N P+W +
Sbjct: 24 EYGN-EIALREKDLGLWRPFTWNAYQTRVRDFALGLIELGLGRQDVIGIIGDNRPDWVAA 82
Query: 243 DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV 302
++ GG + G+Y E + L +A + ED++Q++K+L + + PKLK I+
Sbjct: 83 EIATHAVGGLSLGLYRDVLDEEASYLLNYGEAQLVFAEDEEQVDKLLTLADRVPKLKHII 142
Query: 303 QYE----GKPDKPGVISWDELMELGRAAPD---ESLDRVLETIATNECCTLVYTSGTEGA 355
+ K D P ++S + ELGRA E DR+++T + L TSGT
Sbjct: 143 YSDPRGMRKYDDPRLMSAETFAELGRARATREPELYDRLVDTTKGEDVAILCTTSGTTSH 202
Query: 356 SKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQ 398
K ML+ + + A + F + +S LPL I Q
Sbjct: 203 PKLAMLAAGRVLGHCATYLA-FDPKGPDDEYVSVLPLPWIMEQ 244
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
++ ++ +G R R + +G A + E ++F ++ +P+ ++G +E GA+T+
Sbjct: 331 ILFRALRDRLGFTRLRSAATGGAALGPETFKFFQAMGVPLRTLYGQTELLGAYTLHPAGK 390
Query: 175 FKLDGVGRTIPGT-QTKIVDPDEEGNGEICLK 205
D G + + + +I + D G GEI ++
Sbjct: 391 VDPDTTGVPMADSVEIRIDNADVHGVGEIVVR 422
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY + ++ N ++ AQ+I +F L + GEL T KV+R + +KY+ II
Sbjct: 539 EVYALLRKEVETVN-ATLPPAQRISRFLLLYKELDADDGELTRTRKVRRSVINEKYEGII 597
Query: 481 DKFY 484
D Y
Sbjct: 598 DAIY 601
>gi|424850769|ref|ZP_18275168.1| long-chain fatty-acid-CoA ligase [Rhodococcus opacus PD630]
gi|356667587|gb|EHI47657.1| long-chain fatty-acid-CoA ligase [Rhodococcus opacus PD630]
Length = 616
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E VR +A + LG++ V + EW +DL + AG +Y T +
Sbjct: 54 VTWSEAGDRVRNLAAGLIVLGVQAEQRVALASATRYEWVLADLAVMCAGAATTTVYPTTT 113
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-DKPGVISWDELM 320
+ + S + + EDD QL K+ + + + ++ +V +G P D VI++D+L
Sbjct: 114 AGDVAYIVANSGSRVVFAEDDAQLAKLRENRGELGDVEKVVLIDGSPGDDDWVITFDQLH 173
Query: 321 ELGR----AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
+LG PD DR+ E I ++ TL+YTSGT G K V LSH T+ AA I
Sbjct: 174 DLGEELLAETPDAVHDRI-EAIDPDDLATLIYTSGTTGRPKGVRLSHSAWTYEAAAIDAT 232
Query: 377 FKLESAALSVISFLPLSHI 395
L++ L + +LPLSH+
Sbjct: 233 GILDADDLQYL-WLPLSHV 250
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S +++ G R + +SG+A ++ ++ ++F ++ I + E +G+SE + A V+ P
Sbjct: 350 LVYSTIRERFG-GRLKFFISGSAALNRDVAQWFDAVGIVVLEGYGLSETSAASFVNRPSA 408
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK------EYEANVRTVAKAFLKLGLER 225
++ VG IPGT+T+I D +GEI +K Y N A+A G R
Sbjct: 409 YRFGTVGWAIPGTETRIGD-----DGEILIKGPGVMSGYHENPEATAEALTDDGWFR 460
>gi|313140094|ref|ZP_07802287.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium bifidum NCIMB
41171]
gi|313132604|gb|EFR50221.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium bifidum NCIMB
41171]
Length = 678
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
E A++R+VAK L GL++ V + + W +D + GG A +Y T+S E
Sbjct: 124 NETLADIRSVAKGLLHYGLKKGDGVAFMCRTSYAWDVTDAAIMACGGVLATIYDTDSAEQ 183
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + +VE +K +CP L+ I+ E +E+ G
Sbjct: 184 IRNIVNNSDARLLIVETADMRDKAEGAIEECPSLETILCIE-------TGGLEEIKAYGA 236
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
A DE LD +++I + C++VYTSG+ A K V ++H++ A + Y L +
Sbjct: 237 AVSDEELDERIDSIKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYMPDLLHNK 296
Query: 383 ALSVISFLPLSHIAAQTVD 401
SV+ FLP +H A+ ++
Sbjct: 297 KNSVLLFLPQAHSFARAIN 315
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V Q +D+AN + +S A+ ++KF LP +FS G L +MKV RP V+++Y ++++
Sbjct: 612 VRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFSQENGLLTASMKVIRPKVIRRYATLLN 670
>gi|16271978|ref|NP_438175.1| long chain fatty acid CoA ligase [Haemophilus influenzae Rd KW20]
gi|260580694|ref|ZP_05848521.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
gi|1170730|sp|P44446.1|LCFH_HAEIN RecName: Full=Putative long-chain-fatty-acid--CoA ligase; AltName:
Full=Long-chain acyl-CoA synthetase; Short=LACS
gi|1572946|gb|AAC21681.1| long chain fatty acid coA ligase, putative [Haemophilus influenzae
Rd KW20]
gi|260092756|gb|EEW76692.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
Length = 607
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W D+ + +Y TN
Sbjct: 42 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIVDIATLQIRAITVPIYATN 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 102 TAQQAEFILNHADVKILFVGDQEQYDQTLEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 161
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 162 SFIKTGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 212
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 213 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 272
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 273 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKYFDLRANNKAIPFLLK 329
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 330 KQFALADKL 338
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 554 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 602
>gi|390936743|ref|YP_006394302.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium bifidum BGN4]
gi|389890356|gb|AFL04423.1| putative long-chain-fatty-acid--CoA ligase [Bifidobacterium bifidum
BGN4]
Length = 678
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
E A++R+VAK L GL++ V + + W +D + GG A +Y T+S E
Sbjct: 124 NETLADIRSVAKGLLHYGLKKGDGVAFMCRTSYAWDVTDAAIMACGGVLATIYDTDSAEQ 183
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + +VE +K +CP L+ I+ E +E+ G
Sbjct: 184 IRNIVNNSDARLLIVETADMRDKAEGAIEECPSLETILCIE-------TGGLEEIKAYGA 236
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
A DE LD +++I + C++VYTSG+ A K V ++H++ A + Y L +
Sbjct: 237 AVSDEELDERIDSIKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYMPDLLHNK 296
Query: 383 ALSVISFLPLSHIAAQTVD 401
SV+ FLP +H A+ ++
Sbjct: 297 KNSVLLFLPQAHSFARAIN 315
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V Q +D+AN + +S A+ ++KF LP +FS G L +MKV RP V+++Y ++++
Sbjct: 612 VRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFSQANGLLTASMKVIRPKVIRRYATLLN 670
>gi|302550844|ref|ZP_07303186.1| long chain fatty acid CoA ligase [Streptomyces viridochromogenes
DSM 40736]
gi|302468462|gb|EFL31555.1| long chain fatty acid CoA ligase [Streptomyces viridochromogenes
DSM 40736]
Length = 598
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ + A V T AK + G++ V ++ EW D AG +Y T+
Sbjct: 45 DVTATAFLAEVHTAAKGLIAAGVQPGDRVGLMSRTRYEWTLLDFAIWSAGAVTVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A C+VE D + V+ P LK + Q EG + DEL
Sbjct: 105 SSEQVQWILGDSGATACIVETDAHTTAVESVRDGLPALKHVWQIEGG-------ALDELS 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
LG+ DE+++ ++ T+VYTSGT G K +L+H + I++ +
Sbjct: 158 RLGQDVTDETIEERSSIARADDPATIVYTSGTTGRPKGCVLTHRSFFAECGNIVERLRPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLPL+H+ + V I +M
Sbjct: 218 FRTGECSVLLFLPLAHVFGRLVQIAPMM 245
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ +G R ++SG AP+ L +F + + E +G++E A + D
Sbjct: 332 LVYSKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATAFNPWDR 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ +PG+ +I D E +GE KEY N A+A
Sbjct: 391 QKIGTVGQPLPGSVVRIADDGEVLLHGEHLFKEYWNNPGATAEAL--------------- 435
Query: 234 FNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVK 292
A WF++ D+G + G+ + T + + + V+ED +++
Sbjct: 436 --ADGWFHTGDIGTLDEDGY---LRITGRKKEIIVTAGGKNVAPAVIED--------RIR 482
Query: 293 AQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
A + +V +G+P +++ DE LGR D
Sbjct: 483 AHALVAECMVVGDGRPFVGALVTIDEEF-LGRWCADHG 519
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A QAAID N ++S A+ ++KF L + F+ +G L P++K+KR VVK Y I+ Y
Sbjct: 538 AIQAAIDDGN-AAVSKAESVRKFRILSSQFTEESGHLTPSLKLKRNLVVKDYAQEIEAIY 596
>gi|373467688|ref|ZP_09558982.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
gi|371758409|gb|EHO47182.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
Length = 602
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L + + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIGVQDKIAIFAHNMERWTIADISTLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CP+L+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPQLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+E G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIETGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDVSLSFLPFSHIFERAWAAYILHKGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y+
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEDMYN 595
>gi|310287378|ref|YP_003938636.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium bifidum S17]
gi|309251314|gb|ADO53062.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium bifidum S17]
Length = 678
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
E A++R+VAK L GL++ V + + W +D + GG A +Y T+S E
Sbjct: 124 NETLADIRSVAKGLLHYGLKKGDGVAFMCRTSYAWDVTDAAIMACGGVLATIYDTDSAEQ 183
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + +VE +K +CP L+ I+ E +E+ G
Sbjct: 184 IRNIVNNSDARLLIVETADMRDKAEGAIEECPSLETILCIE-------TGGLEEIKAYGA 236
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
A DE LD +++I + C++VYTSG+ A K V ++H++ A + Y L +
Sbjct: 237 AVSDEELDERIDSIKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYMPDLLHNK 296
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMT 407
SV+ FLP +H A+ ++ V +
Sbjct: 297 KNSVLLFLPQAHSFARAINYICVAS 321
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V Q +D+AN + +S A+ ++KF LP +FS G L +MKV RP V+++Y ++++
Sbjct: 612 VRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFSQANGLLTASMKVIRPKVIRRYATLLN 670
>gi|319774953|ref|YP_004137441.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3047]
gi|317449544|emb|CBY85748.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3047]
Length = 599
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 42/311 (13%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-----DKPGVIS 315
+ + L +D I V D +Q ++ L++ CPKL+ IV KP P +
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM--KPTIQLQQDPLSCT 151
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
W+ ++ G A L + L ++ T++YTSGT G K VML + N+
Sbjct: 152 WESFIKTGSNAQQNELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA-------- 203
Query: 376 YFKLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----V 422
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 204 -HQLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEI 262
Query: 423 YKATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFV 472
A+ R A L + A K+++ F ++I G+ ++ PF+
Sbjct: 263 RPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKYFDLRANNKAIPFL 319
Query: 473 VKKYQSIIDKF 483
+KK ++ DK
Sbjct: 320 LKKLFALADKL 330
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|190150789|ref|YP_001969314.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|189915920|gb|ACE62172.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
Length = 591
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ +V + A L G+E + I N P+W +D GA+ +Y TN
Sbjct: 36 DISWQSFQQSVDQFSLALLAHGIEVQQKIAIFAHNMPQWTITDFGALQIRAVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKP----GV 313
+ + L +D I V D +QLE L+V CP L+ IV E +P V
Sbjct: 96 TAKQAEFILNHADIRILFVGDHEQLEAALEVADNCPLLEKIVCMKSQEISLIRPLAHTKV 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN-AAC 372
+W++ + L++ L ++ TL+YTSGT G K VML + NI A
Sbjct: 156 ENWNDFIAYASQDKQTELNQRLADKNLSDLFTLIYTSGTTGEPKGVMLDYANIAHQLHAH 215
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ K++ +S +SFLP SHI + Y + A + D N ++
Sbjct: 216 DLALPKIDENDVS-LSFLPFSHIFERAWVAYVLYRGATVCYLEDTNEVR 263
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y+L L+L+K++ +G R R+ G A + + ++F ++ + I +GM+E
Sbjct: 319 SYKLADKLVLNKLRALLG-GRIRMMPCGGAKLEPTIGQFFQAIGVNIKLGYGMTETTATV 377
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ A + F+ + +GR +P + KI + +E G + ++ Y A AF + G
Sbjct: 378 SCWADEQFEPNSIGRLMPNAEVKIGENNEILVRGGMVMRGYYKRPEETALAFTEDGF 434
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++I+KF LP FS+ E+ PT+K++R ++++Y+ I+ Y
Sbjct: 542 KELAHFEQIKKFTLLPQAFSVKMEEITPTLKLRRKVILERYRKQIESMY 590
>gi|404423466|ref|ZP_11005110.1| AMP-binding protein [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403654055|gb|EJZ08998.1| AMP-binding protein [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 626
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 20/272 (7%)
Query: 144 KRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEIC 203
+ Y + + E + AH +PD R + GT T ++
Sbjct: 30 REYSVPASFAVGEHDSIVSSVSAHAAESPDHVIFR---RLVNGTWT-----------DVT 75
Query: 204 LKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
E +R+VA + G+ V I+ EW D + G +Y T+S E
Sbjct: 76 CAEAAEQIRSVALGLIAEGIAPGDRVAILSATRYEWPIIDFAILSVGAVTVPIYETSSAE 135
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
L S A I E D + + +++ Q P+L+ +++ +G G + + + E G
Sbjct: 136 QVRFVLDNSAAKIVFAETDGHADTVEQLRGQLPELRKVLRIDGS----GTPALEAMAEAG 191
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA- 382
++A LD+ L I + + TL+YTSGT G K L+H N+ + F E A
Sbjct: 192 KSADAAELDKRLAGIRSADPATLIYTSGTTGQPKGCQLTHSNLLYEIRGAKACFPTELAK 251
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWF 414
++ FLPL+H+ A+ + I + T TL F
Sbjct: 252 GERMLVFLPLAHVLARAITI-AAFTNKVTLGF 282
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ A+G CR ++SG AP+ L ++ + + I E +G++E + A TV+ ++
Sbjct: 361 LVYGKLRAALG-GECRAAISGGAPLGARLGHFYRGVGLSIYEGYGLTETSAAITVNRVNE 419
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ +PG +I + E G + Y N F
Sbjct: 420 LKVGSVGKLMPGNSMRIAEDGELLVKGGVVFSGYWGNEAETNAVFTD------------- 466
Query: 234 FNAPEWFYS-DLGAIYAGGF 252
WF++ DLGAI GF
Sbjct: 467 ----GWFHTGDLGAIDDDGF 482
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN +++S+A+ I+KF LP DF+ TGEL PT+KVKR V +K+ S I Y
Sbjct: 571 AVKDAN-QAVSHAESIRKFRILPVDFTEDTGELTPTLKVKRKVVAEKFASDIAALY 625
>gi|449680445|ref|XP_004209586.1| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like, partial
[Hydra magnipapillata]
Length = 287
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 120 VKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG 179
V + +GLDRCR+ + AAPIS + YF SL++P+ E++GMSE G T+ +P ++
Sbjct: 1 VHKGLGLDRCRLIFTSAAPISKQTLEYFQSLNLPLLELYGMSESTGPLTICSPGHSRITS 60
Query: 180 VGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEW 239
VG+ +P + KI +PDE+G+GE+C + R V +L + S+ G W
Sbjct: 61 VGKLLPINEAKIGNPDEDGSGELCFRG-----RNVMMGYLNSEEKTKESLDDDG-----W 110
Query: 240 FYS-DLGAIYAGGF 252
S D+G + GF
Sbjct: 111 LKSGDVGKVDEDGF 124
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+ KA Q IDRAN K++SNA K+QK++ LP +F+ GELGPT K++RP V+K Y+ ID
Sbjct: 222 LQKAIQDGIDRANKKAVSNASKVQKWKLLPLEFTTAGGELGPTQKLRRPQVMKMYKETID 281
Query: 482 KFYD 485
+ Y+
Sbjct: 282 EMYE 285
>gi|307250680|ref|ZP_07532617.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307264092|ref|ZP_07545689.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306857288|gb|EFM89407.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306870570|gb|EFN02317.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 591
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ +V + A L G+E + I N P+W +D GA+ +Y TN
Sbjct: 36 DISWQSFQQSVDQFSLALLAHGIEVQQKIAIFAHNMPQWTITDFGALQIRAVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKP----GV 313
+ + L +D I V D +QLE L+V CP L+ IV E +P V
Sbjct: 96 TAKQAEFILNHADIRILFVGDHEQLEAALEVADNCPLLEKIVCMKSQEISLIRPLAHTKV 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN-AAC 372
+W++ + L++ L ++ TL+YTSGT G K VML + NI A
Sbjct: 156 ENWNDFIAYASQDKQTELNQRLADKNLSDLFTLIYTSGTTGEPKGVMLDYANIAHQLHAH 215
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ K++ +S +SFLP SHI + Y + A + D N ++
Sbjct: 216 DLALPKIDENDVS-LSFLPFSHIFERAWVAYVLYRGATVCYLEDTNEVR 263
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y+L L+L+K++ +G R R+ G A + + ++F ++ + I +GM+E
Sbjct: 319 SYKLADKLVLNKLRALLG-GRIRMMPCGGAKLEPTIGQFFQAIGVNIKLGYGMTETTATV 377
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ A + F+ + +GR +P + KI + +E G + ++ Y A AF + G
Sbjct: 378 SCWADEQFEPNSIGRLMPNAEVKIGENNEILVRGGMVMRGYYKRPEETALAFTEDGF 434
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++I+KF LP FS+ E+ PT+K++R ++++Y+ I+ Y
Sbjct: 542 KELAHFEQIKKFTLLPQAFSVKMEEITPTLKLRRKVILERYRKQIESMY 590
>gi|448727043|ref|ZP_21709420.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
gi|445792243|gb|EMA42854.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
Length = 643
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
V+ +A F LG+E V + EW +D + AGG +YT++SP+ + L
Sbjct: 73 VKRLAAGFRSLGIEAGDRVGLFANTRMEWAQTDFAVLAAGGVVTTVYTSSSPDQVEYLLD 132
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY---EGKPDKPGVISWDELMELGRAAP 327
A VVE+ + LE++L V+ + L IV EG D+ V++ ++ E G +
Sbjct: 133 DPGATGVVVENQELLERVLAVEDEL-DLDFIVSMDSIEGYGDREDVLTLAQVHERGVGSF 191
Query: 328 DES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE------ 380
D+S + L+ ++ +LVYTSGT G K V L+H N N + + F
Sbjct: 192 DQSDYEGWLDARDPDDLASLVYTSGTTGQPKGVRLTHRNFKANVDQVYRRFGPREDKGDL 251
Query: 381 ---SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ S +SFLPL+H+ + + + AT+ +A+
Sbjct: 252 PTIDPSASTLSFLPLAHVFERLAGHFLMFAAGATVAYAE 290
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L L+ +V++ +G + +SG +S EL R F + +PI E +G++E A V+
Sbjct: 361 LADRLVFEQVREGVGGN-IEFFISGGGSLSPELGRLFDGMGLPILEGYGLTETAPVVAVN 419
Query: 171 APDDFKLDGVGRTIPGTQTKI---VDPDE-EGNGEI 202
P+ ++ +G + + K+ V PD+ + +GE+
Sbjct: 420 PPEAPEIGTIGPPVVDEEIKVDASVVPDDLDADGEV 455
>gi|448599433|ref|ZP_21655337.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
gi|445736894|gb|ELZ88434.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
Length = 666
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD + G + E VR +A F LG+E V ++ EW +D + AGG
Sbjct: 58 PDGDYAG-LTYDEMRGIVRRLAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLGAGGVV 116
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDK 310
+YT++S + L A+ VVE++ LE++L V+ + L+ IV +Y+G D+
Sbjct: 117 TTVYTSSSERQTQYLLSDPGADAVVVENEALLERVLAVEDEL-DLRFIVVVDEYDGHDDR 175
Query: 311 PGVISWDELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
V++ EL G A DE + + L+ + +L+YTSGT G K V L+H N N
Sbjct: 176 EDVLTLGELYRCGEEAYDEAAYESWLDERDPEDLASLIYTSGTTGQPKGVRLTHWNFRSN 235
Query: 370 AACIIQYF-----KLESAALS----VISFLPLSHI 395
+ F K ++ + +SFLPL+H+
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDSVALSFLPLAHV 270
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ +A +D AN +S + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEAEVDAAN-ESFESYERIKQFRVVPEEFSEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
YD
Sbjct: 645 SLIYD 649
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ +V+ A+G + +SG +S EL + ++ +PI E +G++E + +
Sbjct: 360 HRLADRLVFGQVRDALGGN-LDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P+ K+ +G + +TK+
Sbjct: 419 VNPPEAPKIGTIGYPLRNVETKL 441
>gi|228472919|ref|ZP_04057676.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228275501|gb|EEK14278.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 592
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 7/217 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCII-GFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
I +EY + V++A L+LG++ + + ++ N EW D+ + G +Y T
Sbjct: 35 ISSEEYVKKINQVSRALLRLGVQPHDKIAMVTSNNRTEWHILDMAIMQIGAHNVPIYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
E ++ L ++ C D + EK+ + ++ L+ + ++ G W E++
Sbjct: 95 PKEDYIYILNHAEVKYCFASDKELFEKVSSIVSEIATLEEVFTFDAVE---GARGWREIL 151
Query: 321 ELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
LG +++ +D + E I + T++YTSGT G K VMLSHDNI N + +
Sbjct: 152 SLGEDNTNQAQVDSLKEQIQPTDMATIIYTSGTTGKPKGVMLSHDNIISNIKNCHERVPV 211
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+S + +SFLP+ H+ + + Y L+FA+
Sbjct: 212 KSGDI-CLSFLPVCHVFERML-TYLYQYNGIRLYFAE 246
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + ++R N K + ++I+ F+ P ++SI G L PT+K+KR +++KY+ +
Sbjct: 526 RVRERITQEVERIN-KKLGKWEQIKAFDLTPDEWSIDGGHLTPTLKLKRRIILEKYKDMY 584
Query: 481 DKFYD 485
+ FY+
Sbjct: 585 NTFYN 589
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 94 HYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIP 153
Y Y +K ++ R LI SK K+A+G + G+A + L R F + IP
Sbjct: 301 QYEPYNQKGWWYSLKLKIARKLIFSKWKKALGGQLQMIC--GSAALQPRLVRVFSAAGIP 358
Query: 154 ICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
I E +G++E + +V+ +K+ +G+ I + KI + +GEI K
Sbjct: 359 IWEGYGLTETSPVISVNCKKGHLWKIGTIGKPIDHIEVKIAE-----DGEILCK 407
>gi|165976848|ref|YP_001652441.1| long-chain acyl-CoA synthetase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876949|gb|ABY69997.1| long-chain acyl-CoA synthetase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 591
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ +V + A L G+E + I N P+W +D GA+ +Y TN
Sbjct: 36 DISWQSFQQSVDQFSLALLAHGIEVQQKIAIFAHNMPQWTITDFGALQIRAVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKP----GV 313
+ + L +D I V D +QLE L+V CP L+ IV E +P V
Sbjct: 96 TTKQAEFILNHADIRILFVGDHEQLEAALEVADNCPLLEKIVCMKSQEISLIRPLAHTKV 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN-AAC 372
+W++ + L++ L ++ TL+YTSGT G K VML + NI A
Sbjct: 156 ENWNDFIAYASQDKQTELNQRLADKNLSDLFTLIYTSGTTGEPKGVMLDYANIAHQLHAH 215
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ K++ +S +SFLP SHI + Y + A + D N ++
Sbjct: 216 DLALPKIDENDVS-LSFLPFSHIFERAWVAYVLYRGATVCYLEDTNEVR 263
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y+L L+L+K++ +G R R+ G A + + ++F ++ + I +GM+E
Sbjct: 319 SYKLADKLVLNKLRALLG-GRIRMMPCGGAKLEPTIGQFFQAIGVNIKLGYGMTETTATV 377
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ A + F+ + +GR +P + KI + +E G + ++ Y A AF + G
Sbjct: 378 SCWADEQFEPNSIGRLMPNAEVKIGENNEILVRGGMVMRGYYKRPEETALAFTEDGF 434
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++I+KF LP FS+ E+ PT+K++R ++++Y+ I+ Y
Sbjct: 542 KELAHFEQIKKFTLLPQAFSVKMEEITPTLKLRRKVILERYRKQIESMY 590
>gi|148827162|ref|YP_001291915.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
gi|148718404|gb|ABQ99531.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
Length = 599
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L + + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIGVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIKTGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|226365502|ref|YP_002783285.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226243992|dbj|BAH54340.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 605
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 4/211 (1%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P G ++ E+ V VAK + G+E V I+ EW D AGG
Sbjct: 38 PGSGGWVDVTAAEFAEQVSAVAKGLIASGIELGDRVAILSATRYEWVVVDYAIWTAGGCT 97
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y T++P+ L S ++ VVE+ + + V P LK ++Q EG +
Sbjct: 98 VAIYETSAPDQAKWILEDSGTSLLVVENANHADALKVVTDAAPDLKEVLQIEGGASEATG 157
Query: 314 IS---WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
S DEL + G + DE L + + TL+YTSGT G K V L+H N +
Sbjct: 158 TSSSAIDELSKRGESITDEQLHERRHQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAES 217
Query: 371 ACI-IQYFKLESAALSVISFLPLSHIAAQTV 400
A + + A + FLPL+H+ A+ +
Sbjct: 218 AAVKLALSDAMYAGRRTLMFLPLAHVFARAI 248
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G C ++SG A + L +F + +P+ E +G++E + A +
Sbjct: 334 HALFDKLVYSKLRTALG-GECDRAVSGGAALGARLGHFFRGIGVPVYEGYGLTETSAAVS 392
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V+ K+ VG+ I G KI + +GE+ LK
Sbjct: 393 VNTTRAQKVGTVGKPIDGHAAKIGE-----DGELLLK 424
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +SN ++I+K+ L DF+ TGEL PT+K+KR + K++ + I+ Y
Sbjct: 556 KKVSNPERIKKYRILEVDFTQETGELTPTLKLKRNVIHKEHGAAIEAIY 604
>gi|86148106|ref|ZP_01066406.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
gi|85834093|gb|EAQ52251.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
Length = 602
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 16/297 (5%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ + T++ A L GL + I N P+W +D ++ A +Y TN+
Sbjct: 36 ISWEQFGQQIDTLSLALLAQGLRVQDKIGIFSNNMPQWTVADFASLQARLVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---VISWDE 318
+ + +D I V + Q + + + +C +L+ +V D G +SW E
Sbjct: 96 AAQSSYIIQNADVKILFVGEQAQFDAAVSLFEECEQLEVVVAMSDDIDLQGHRFAVSWKE 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
M G LD L ++ TL+YTSGT G K VML + N+ + +
Sbjct: 156 FMARGVEDQQAELDVRLADACMDDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKGHDERLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD----KNALKVYKAT-QAAIDRA 433
L +S + FLPLSH+ + Y + A + D ++AL K T +A+ R
Sbjct: 216 LSKDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVKPTVMSAVPRF 274
Query: 434 NLKSISN-AQKIQKFEFLPADFSIPTGELGPTMKV-----KRP-FVVKKYQSIIDKF 483
K S +K+ K F+ +G + V + P F++KK ++ DK
Sbjct: 275 YEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQEGRTPSFMLKKSHALADKL 331
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y+
Sbjct: 547 QELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYN 596
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
++ L L+LSK++ +G G A + + R+F ++ I + +GM+E
Sbjct: 324 SHALADKLVLSKLRALLG-GNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG + KI DE G + ++ Y AK F + G
Sbjct: 381 TVSCWDDRCFNPDSIGMSMPGAEVKIGAKDEILVRGPMVMRGYYKMPEETAKTFDEHGF 439
>gi|313672314|ref|YP_004050425.1| amp-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939070|gb|ADR18262.1| AMP-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 606
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 11/242 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K Y V +A+ K+G+++ V I+ N P W +D+ G +Y TN+
Sbjct: 38 IPYKRYYELVLMMARGLKKIGVKKGDRVAILSENRPGWIITDMAIQICGAITVPIYPTNT 97
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG-KPDKP-GVISWDEL 319
PE + L S++ + + Q +KI ++ + P ++ + ++ DK V ++ ++
Sbjct: 98 PETIEYILNNSESKAVFISNKVQFDKIYSIRDKIPSVEYVFSFDRFMSDKALPVFTFLQI 157
Query: 320 MELGRAAPDE---SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
E+ DE S++ + + + T++YTSGT G K VML+H N+ +
Sbjct: 158 SEISIPLNDEEKRSIESGISEVKPEDVATIIYTSGTTGFPKGVMLTHRNLMSEIFLGTKK 217
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNALKVYKATQAAI 430
++ + +SFLPLSH+ ++V Y + + FA+ +N L+V ++
Sbjct: 218 IEIMTDKEVFLSFLPLSHVLERSVGYYIPVYNGCEIVFAENIDKVAQNILEVNPTMMISV 277
Query: 431 DR 432
R
Sbjct: 278 PR 279
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 98 YLEKNVS--EPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPIC 155
Y EKNV Y+ LI SK+++ G +R + +SG AP+ + +F ++ IP+
Sbjct: 318 YEEKNVDTLSELKYKFYDKLIFSKIRERFG-NRFKGFVSGGAPLDKNINEFFWAIGIPVY 376
Query: 156 EVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTV 214
E +G++E + ++ P ++ VG T+ KI + E G + +K Y N T
Sbjct: 377 EGYGLTETSPGICINCPSHVRIGSVGTPFEETEFKIAEDGEILVRGPMVMKGYYKNEETT 436
Query: 215 AKAF 218
+AF
Sbjct: 437 KEAF 440
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 419 ALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQS 478
+K+Y AAI+ ++ + I+KF + +F+I GE+ PT+K++R + KY+
Sbjct: 538 VIKLYNERIAAIN----SKLAKYETIKKFAIITVEFTIEGGEITPTLKLRRKNIYNKYKD 593
Query: 479 IIDKFYD 485
II+ Y+
Sbjct: 594 IIECLYE 600
>gi|238761543|ref|ZP_04622518.1| long-chain-fatty-acid--CoA ligase [Yersinia kristensenii ATCC
33638]
gi|238700057|gb|EEP92799.1| long-chain-fatty-acid--CoA ligase [Yersinia kristensenii ATCC
33638]
Length = 599
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
EG ++ ++ +V ++ A L LG+ V I N+ W +DL + G + +
Sbjct: 33 EGENQLTWRQINTHVTRISAALLSLGVAIQERVGIFANNSMAWSLADLAILQIRGVSVPL 92
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISW 316
Y TN+ ++ + +D I V + Q + + +K CP+L IV + D G
Sbjct: 93 YATNTTAQAVYVVNDADVRILFVGEQAQFDVAITLKPLCPQLSHIVVLDPNVDLRGCEYA 152
Query: 317 DELMELGRAAPDESLDRVLETIATNEC-----CTLVYTSGTEGASKPVMLSHDNITFNAA 371
L + + PD ++ + L T + C TL+YTSGT G K VML + N+
Sbjct: 153 QHLADFEQ-QPD-AIQQHLLTARIDGCDLSDLFTLIYTSGTTGEPKGVMLEYRNMAAQLY 210
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q L S S +SFLPLSH+ + Y + T A ++ D N ++
Sbjct: 211 LHDQRLALTSEDTS-LSFLPLSHVFERAWSFYVMHTGAQNVYIRDTNWVR 259
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP F++ TGEL PT+K++R +++ YQ+ ID Y
Sbjct: 549 KELAKFEQVKRFTLLPQAFTMETGELTPTLKLRRKIILQNYQNEIDSMY 597
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L L+LSK++ +G + R + A + + +F ++ I I +GM+E +
Sbjct: 327 FKLADRLVLSKLRDLLG-GKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVS 385
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLG 222
DF+ +G+ +PG + ++ +E + G I ++ Y + A++F + G
Sbjct: 386 CWEEKDFRFGSIGKPLPGIEVRLGAENEIQVRGPIIMRGYFNKPQETAESFTEDG 440
>gi|375129923|ref|YP_004992022.1| long-chain-fatty-acid--CoA ligase-like protein [Vibrio furnissii
NCTC 11218]
gi|315179096|gb|ADT86010.1| hypothetical long-chain-fatty-acid--CoA ligase-like protein [Vibrio
furnissii NCTC 11218]
Length = 604
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 5/225 (2%)
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
D E G I ++ + ++ A L GL+ + I N P+W +D A+
Sbjct: 30 DNEWQG-ISWTQFGEEMDAMSMALLAFGLDVQDKIGIFSNNMPQWTIADFAALQIRAVTV 88
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKP 311
+Y TN+ E + L +D + V + Q + + + QC +L+ IV D
Sbjct: 89 PIYPTNTAEQAAYILQDADVKVLFVGEQPQFDAAVTMFEQCDQLQLIVAMSDAIALGDCD 148
Query: 312 GVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
+SW + LG E LD LE ++ TL+YTSGT G K VML + N+
Sbjct: 149 FAMSWQAFVALGENTSGELLDERLEQANDDDLFTLIYTSGTTGKPKGVMLDYCNVGAQLE 208
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 209 GHDQRLNLSQDDVS-LCFLPLSHVFERAWSFYVLYKGATNCYLQD 252
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L L+LSK++ +G R G A + + R+F ++ I + +GM+E T
Sbjct: 325 HQLADKLVLSKLRGLLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA--T 381
Query: 169 VSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
+S DD F D +G T+PG Q KI + +E
Sbjct: 382 ISCWDDQCFDPDSIGMTMPGAQVKIGENNE 411
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 437 SISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
++ +++++F+ LP FS+ GEL PT K++R + +YQ I++ Y
Sbjct: 548 GLAKFEQVKRFKLLPKAFSMDDGELTPTQKLRRKVIHDRYQHEIEEMY 595
>gi|126208877|ref|YP_001054102.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|126097669|gb|ABN74497.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 591
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ +V + A L G+E + I N P+W +D GA+ +Y TN
Sbjct: 36 DISWQSFQQSVDLFSLALLAHGIEVQQKIAIFAHNMPQWTITDFGALQIRAVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKP----GV 313
+ + L +D I V D +QLE L+V CP L+ IV E +P V
Sbjct: 96 TAKQAEFILNHADIRILFVGDHEQLEAALEVADNCPLLEKIVCMKSQEISLIRPLAHTKV 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN-AAC 372
+W++ + L++ L ++ TL+YTSGT G K VML + NI A
Sbjct: 156 ENWNDFIAYASQDKQTELNQRLADKNLSDLFTLIYTSGTTGEPKGVMLDYANIAHQLHAH 215
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ K++ +S +SFLP SHI + Y + A + D N ++
Sbjct: 216 DLALPKIDENDVS-LSFLPFSHIFERAWVAYVLYRGATVCYLEDTNEVR 263
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 100 EKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFG 159
+KN +Y+L L+L+K++ +G R R+ G A + + ++F ++ + I +G
Sbjct: 311 KKNRKNTLSYKLADKLVLNKLRALLG-GRIRMMPCGGAKLEPTIGQFFQAIGVNIKLGYG 369
Query: 160 MSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAF 218
M+E + A D F+ + +GR +P + KI + +E G + ++ Y A AF
Sbjct: 370 MTETTATVSCWADDQFEPNSIGRLMPNAEVKIGENNEILVRGGMVMRGYYKRPEETALAF 429
Query: 219 LKLGL 223
+ G
Sbjct: 430 TEDGF 434
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++I+KF LP FS+ E+ PT+K++R ++++Y+ I+ Y
Sbjct: 542 KELAHFEQIKKFTLLPQAFSVKMEEITPTLKLRRKVILERYRKQIESMY 590
>gi|365966521|ref|YP_004948083.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans ANH9381]
gi|365745434|gb|AEW76339.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans ANH9381]
Length = 595
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I D +Q ++++ + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFAGDQEQYDQVIDIADECPKLIKIVAMKSTINLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L++ + + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDSKSLADLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QIDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 79 VKRWIANYAKSTSLQHYMAYL-EKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + + + ++ + P Y L L+L K++ +G R R+ G
Sbjct: 291 LRQWIFNWAIAVGRKRFDTLAKQQKIGFPLKQQYALADKLVLGKLRALLG-GRIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFSFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE-EGNGEICLKEYEANVRTVAKAF 218
+E G + +K Y + A F
Sbjct: 408 NNEILVRGGMVMKGYYKKPQETADTF 433
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++I++F LP FS E+ PT+K++R ++++Y+ +I+ Y+
Sbjct: 546 KELAGWEQIKRFTLLPQAFSTQLEEITPTLKLRRKVILQRYKELIEAMYN 595
>gi|303253781|ref|ZP_07339916.1| long-chain acyl-CoA synthetase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248462|ref|ZP_07530482.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302647365|gb|EFL77586.1| long-chain acyl-CoA synthetase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855030|gb|EFM87213.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 591
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ +V + A L G+E + I N P+W +D GA+ +Y TN
Sbjct: 36 DISWQSFQQSVDLFSLALLAHGIEVQQKIAIFAHNMPQWTITDFGALQIRAVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKP----GV 313
+ + L +D I V D +QLE L+V CP L+ IV E +P V
Sbjct: 96 TAKQAEFILNHADIRILFVGDHEQLEAALEVADNCPLLEKIVCMKSQEISLIRPLAHTKV 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN-AAC 372
+W++ + L++ L ++ TL+YTSGT G K VML + NI A
Sbjct: 156 ENWNDFIAYASQDKQTELNQRLADKNLSDLFTLIYTSGTTGEPKGVMLDYANIAHQLHAH 215
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ K++ +S +SFLP SHI + Y + A + D N ++
Sbjct: 216 DLALPKIDENDVS-LSFLPFSHIFERAWVAYVLYRGATVCYLEDTNEVR 263
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 100 EKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFG 159
EK +Y+L L+L+K++ +G R R+ G A + + ++F ++ + I +G
Sbjct: 311 EKKQKNTLSYKLADKLVLNKLRALLG-GRIRMMPCGGAKLEPTIGKFFQAIGVNIKLGYG 369
Query: 160 MSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAF 218
M+E + A D F+ + +GR +P + KI + +E G + ++ Y A AF
Sbjct: 370 MTETTATVSCWADDQFEPNSIGRLMPNAEVKIGENNEILVRGGMVMRGYYKRPEETALAF 429
Query: 219 LKLGL 223
+ G
Sbjct: 430 TEDGF 434
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++I+KF LP FS+ E+ PT+K++R ++++Y+ I+ Y
Sbjct: 542 KELAHFEQIKKFTLLPQAFSVKMEEITPTLKLRRKVILERYRKQIESMY 590
>gi|433429134|ref|ZP_20407305.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
gi|432195189|gb|ELK51743.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
Length = 666
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD + G + E VR +A F LG+E V ++ EW +D + AGG
Sbjct: 58 PDGDYAG-LTYDEMRGIVRRLAAGFRDLGIESGDRVGVLSHTRMEWAQTDFAVLGAGGVV 116
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDK 310
+YT++S + L A+ VVE++ LE++L V+ + L+ IV +Y+G D+
Sbjct: 117 TTVYTSSSERQTQYLLSDPGADAVVVENEALLERVLAVEDEL-DLRFIVVVDEYDGHDDR 175
Query: 311 PGVISWDELMELGRAAPDE-SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
V++ EL G A DE + + L+ + +L+YTSGT G K V L+H N N
Sbjct: 176 EDVLTLGELYRCGEEAYDEAAYESWLDERDPEDLASLIYTSGTTGQPKGVRLTHWNFRSN 235
Query: 370 AACIIQYF-----KLESAALS----VISFLPLSHI 395
+ F K ++ + +SFLPL+H+
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDSVALSFLPLAHV 270
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ +A +D AN ++ + ++I++F +P +FS + PTMK KR ++ +Y +
Sbjct: 586 RVYERIEAEVDAAN-ENFESYERIKQFRVVPEEFSEGNDLMTPTMKKKRRNILDRYADEV 644
Query: 481 DKFYD 485
YD
Sbjct: 645 SLIYD 649
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+RL L+ +V+ A+G + +SG +S EL + ++ +PI E +G++E + +
Sbjct: 360 HRLADRLVFGQVRDALGGN-LDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVIS 418
Query: 169 VSAPDDFKLDGVGRTIPGTQTKI 191
V+ P+ K+ +G + +TK+
Sbjct: 419 VNPPEAPKIGTIGYPLRNVETKL 441
>gi|448391685|ref|ZP_21566780.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445665097|gb|ELZ17775.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 660
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 21/224 (9%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR +A F LG+ V I EW SD G + AGG +Y ++SP+ + L
Sbjct: 77 VRRIAAGFRDLGIADGERVGIFADTRMEWALSDFGILAAGGVVTTVYESSSPDQIQYLLD 136
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIV----QYEGKPDKPGVISWDELMELGRAA 326
DA+ VVE++ LE++LKV+ + +V + + D+ VI+ EL G
Sbjct: 137 DPDASGVVVENETLLERVLKVEDELDLEFYVVFDALENDAYADREDVITLGELYRRGDEG 196
Query: 327 PD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-------- 377
D E+ D L ++ +L+YTSGT G K V L+H N+ N + + +
Sbjct: 197 FDREAYDSWLAARDVDDLASLIYTSGTTGKPKGVKLTHRNLRSNVNQLYRRYGPRDDKDE 256
Query: 378 -----KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
ES ALSV LPL+H+ +T + + A + + +
Sbjct: 257 DDPSITPESRALSV---LPLAHVFERTAGHFMLFAAGACIAYGE 297
>gi|384086047|ref|ZP_09997222.1| AMP-dependent synthetase and ligase [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 577
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 9/234 (3%)
Query: 192 VDPD--------EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSD 243
+DPD +G ++ ++A V+ A+ L+LG++R V ++ N+ +W D
Sbjct: 21 LDPDGCIALERQPQGFQKVSAAHFQARVQARAEGLLRLGVKRGERVILMAPNSMDWAIMD 80
Query: 244 LGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ 303
+ G +Y + SP + L S A + ++E + EK+ P + +++
Sbjct: 81 FAILSIGAITVPLYPSFSPREIHYVLGDSGAGLVLLEGSNEWEKMGGEGWGVPHERILLR 140
Query: 304 YEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSH 363
+ +W +L + A + L L ++ + ++VYTSGT G K VMLSH
Sbjct: 141 NPDAARSASLKNWAQLEQENTALHKQELTERLGSLQREQIASIVYTSGTTGWPKGVMLSH 200
Query: 364 DNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
NI N A + L ++S LPLSH+ + + + + +A++
Sbjct: 201 GNILSNIAGFLPLVPLRRGQ-RLLSILPLSHVFERGTGHFGAYLLGLEVAYAER 253
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 PYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
P+ + R L++S +++ +G R R +SG AP+ T++ R+FL + +P+ E +GM+E +
Sbjct: 313 PWQRYVARRLLVSGLRKKLG-GRLRFFVSGGAPLDTDITRFFLDIGLPVVEGYGMTETSP 371
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ DD + VGR +P Q +I +GEI ++
Sbjct: 372 VIAANPLDDIRPGTVGRFLPNLQGRIA-----ADGEILVR 406
>gi|46143289|ref|ZP_00135531.2| COG1022: Long-chain acyl-CoA synthetases (AMP-forming)
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 503
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ +V + A L G+E + I N P+W +D GA+ +Y TN
Sbjct: 36 DISWQSFQQSVDLFSLALLAHGIEVQQKIAIFAHNMPQWTITDFGALQIRAVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKP----GV 313
+ + L +D I V D +QLE L+V CP L+ IV E +P V
Sbjct: 96 TAKQAEFILNHADIRILFVGDHEQLEAALEVADNCPLLEKIVCMKSQEISLIRPLAHTKV 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN-AAC 372
+W++ + L++ L ++ TL+YTSGT G K VML + NI A
Sbjct: 156 ENWNDFIAYASQDKQTELNQRLADKNLSDLFTLIYTSGTTGEPKGVMLDYANIAHQLHAH 215
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ K++ +S +SFLP SHI + Y + A + D N ++
Sbjct: 216 DLALPKIDENDVS-LSFLPFSHIFERAWVAYVLYRGATVCYLEDTNEVR 263
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y+L L+L+K++ +G R R+ G A + + ++F ++ + I +GM+E
Sbjct: 319 SYKLADKLVLNKLRALLG-GRIRMMPCGGAKLEPTIGQFFQAIGVNIKLGYGMTETTATV 377
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ A D F+ + +GR +P + KI + +E G + ++ Y A AF + G
Sbjct: 378 SCWADDQFEPNSIGRLMPNAEVKIGENNEILVRGGMVMRGYYKRPEETALAFTEDGF 434
>gi|367470042|ref|ZP_09469762.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
gi|365814892|gb|EHN10070.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
Length = 591
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 13/246 (5%)
Query: 181 GRTIPGTQTKIVDPDEEG-------NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVC 230
GRT+ G + I D + +GE I E + +R VA+ + LGL+ V
Sbjct: 9 GRTLAGFVSSIADGRRDDVALRHKHDGEWPEITYGELDDRIRDVARGLVALGLKPGDRVS 68
Query: 231 IIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILK 290
I+ PEW + L AG +Y TNSP+ C L + + + + E+ Q K+ +
Sbjct: 69 ILAETRPEWTTASLAITLAGLVVVPIYPTNSPQECAWVLGDAGSKVVIAENGAQAAKVHE 128
Query: 291 VKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTS 350
++ P L+ +V +G +S D+++ G + +L++ ++ T++YTS
Sbjct: 129 IRGDLPHLECVVVIDGDGGPDADLSLDDVVTRGESIDRATLEQRSTATGPDDDYTIIYTS 188
Query: 351 GTEGASKPVMLSHDNITFNAAC-IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVA 409
GT G K +LS N + A I++ L V FLPL+H A + + ++
Sbjct: 189 GTTGPPKGCVLSQGN--YRAMLEIVREADLIQPEDVVYLFLPLAHAMALLIQLSALDRGV 246
Query: 410 ATLWFA 415
+F
Sbjct: 247 TVAYFG 252
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+ S V+ A G R R ++SGAAPI+ E+ +F + +P+ E FGM+E + A T+S P+
Sbjct: 328 LFSNVRNAFG-GRVRRAVSGAAPIAPEVLEFFWAAGVPVLEGFGMTETSTAATLSTPEHH 386
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VGR +P +I +GE+ ++
Sbjct: 387 RFGSVGRALPRVDIRIAQ-----DGELLVR 411
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
Q A+D AN S + ++ +KF L D S TGEL PT KVKR V +K+ +++ Y+
Sbjct: 533 QRAVDEAN-ASYARVEQAKKFAILGRDLSQETGELTPTSKVKRNVVHEKFADVLNALYE 590
>gi|329123150|ref|ZP_08251720.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
gi|327471705|gb|EGF17147.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
Length = 607
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 42/311 (13%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 42 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-----DKPGVIS 315
+ + L +D I V D +Q ++ L++ CPKL+ IV KP P +
Sbjct: 102 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAM--KPTIQLQQDPLSCT 159
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
W+ ++ G A L + L ++ T++YTSGT G K VML + N+
Sbjct: 160 WESFIKTGSNAQQNELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA-------- 211
Query: 376 YFKLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----V 422
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 212 -HQLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEI 270
Query: 423 YKATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFV 472
A+ R A L + A K+++ F ++I G+ ++ PF+
Sbjct: 271 RPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKYFDLRANNKAIPFL 327
Query: 473 VKKYQSIIDKF 483
+KK ++ DK
Sbjct: 328 LKKLFALADKL 338
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 554 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 602
>gi|417932159|ref|ZP_12575508.1| AMP-binding enzyme [Propionibacterium acnes SK182B-JCVI]
gi|340774769|gb|EGR97244.1| AMP-binding enzyme [Propionibacterium acnes SK182B-JCVI]
Length = 644
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 201 EICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYAGG 251
E ++ Y R VA +AF+ + GL+R + + N PEW +DL + G
Sbjct: 58 EWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFSGNCPEWIEADLAGMTIGV 117
Query: 252 FAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----G 306
+Y T++P+ +H + + + V K+L +IL+ + Q P L+A++ + G
Sbjct: 118 VPVPIYPTSTPDQIVHIVTDAGVRVIVAAGPKELGRILEARDQMPGLEAVILLDPADQVG 177
Query: 307 KPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVMLS 362
D V+S D++ + G + E + V+E C L+YTSGT G K VM+S
Sbjct: 178 DQDGLTVLSLDQVRQAGVS---EEMQGVVEERMGQSCADDVAALIYTSGTTGQPKGVMIS 234
Query: 363 HDNITFNAACIIQYFKLESAALSVISFLPLSH 394
H + +F + A S +SFLPLSH
Sbjct: 235 HRAALAELQALDAFFDVTPADHS-LSFLPLSH 265
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P +
Sbjct: 365 LVLKAIRDAVGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGE 423
Query: 175 FKLDGVGRTIPGTQTKIVDPDE 196
+K G+ + G++ + E
Sbjct: 424 YKFGTAGKPLVGSEITTTEEGE 445
>gi|386265628|ref|YP_005829120.1| long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)
(LACS) [Haemophilus influenzae R2846]
gi|309972864|gb|ADO96065.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2846]
Length = 607
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 132/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y+TN
Sbjct: 42 DISWKNFQEQLNQLSRALLTHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYSTN 101
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ PKL+ IV + P +W+
Sbjct: 102 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHYPKLQKIVAMKSTIQLQQDPLSCTWE 161
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+E G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 162 SFIETGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 212
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 213 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 272
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 273 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWTISVGQKHFDLRANNKAIPFLLK 329
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 330 KQFALADKL 338
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 554 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 602
>gi|407277350|ref|ZP_11105820.1| long-chain-fatty-acid-CoA ligase, FadD11 [Rhodococcus sp. P14]
Length = 612
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 8/206 (3%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P G G ++ V +A + LG+E V I EW +D + AG
Sbjct: 43 PRGNGWGSTTWRQVGDRVTALAAGLIALGVEPEDPVAIASSTRYEWVLADFAIMCAGAAT 102
Query: 254 AGMY-TTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
+Y TTN+P+ + S + + V ED Q++K++ +A P+++ +V +G+ D
Sbjct: 103 TTIYPTTNAPDVAF-IVANSGSAVVVAEDWTQVDKLVAHRADLPEVRTVVVVDGEGDGDW 161
Query: 313 VISWDELMELGRA----APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
V++ +L + GRA +P DRV + I + +++YTSGT G K V+L H T+
Sbjct: 162 VVTLADLEDRGRALLAESPSVVADRV-DAIRPEQLASIMYTSGTTGKPKGVLLPHSGWTY 220
Query: 369 NAACIIQYFKLESAALSVISFLPLSH 394
AA + L L+ + +LPLSH
Sbjct: 221 TAAAVDAVNILGPDDLNFL-WLPLSH 245
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVS---EPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
G K+ I ++A L+ A E + YR+ L+ S VK+ G R R +S
Sbjct: 306 GAKKKIFDWAVGVGLRVSQARQEDRAPSALDRLRYRIADRLVFSTVKERFG-GRLRFFVS 364
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
AAP+ + ++F + I I E +G++E + A ++ P ++L VG PGT+ +I +
Sbjct: 365 AAAPLDRAVAQWFDAAGIIILEGYGLTETSAASFINRPYAYRLGTVGWPFPGTEVQIAE- 423
Query: 195 DEEGNGEICLK 205
+GE+ L+
Sbjct: 424 ----DGEVLLR 430
>gi|254229751|ref|ZP_04923159.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262392424|ref|YP_003284278.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
gi|151937718|gb|EDN56568.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262336018|gb|ACY49813.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
Length = 602
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 99/227 (43%), Gaps = 9/227 (3%)
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
DEE G I ++ V ++ A L GL + I N P+W +D+ A+ G
Sbjct: 30 DEEWQG-ITWTQFGQQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADIAALQLRGVTV 88
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPD 309
+Y TN+ + + +D + V + Q + + + QC +L+ IV G+ D
Sbjct: 89 PIYPTNTAAQSAYIIDNADVKVLFVGEQPQFDAAVSIFDQCEQLELIVAMSDDIELGEHD 148
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
VISW + G LD LE ++ TL+YTSGT G K VML + NI
Sbjct: 149 --FVISWQAFVAKGDTTYQVELDARLEQAKEDDLLTLIYTSGTTGQPKGVMLDYANIAAQ 206
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L + +S + FLPLSH+ + Y + A + D
Sbjct: 207 LEGHDQRLSLSQSDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPRAFSMDDGELTPTQKLRRKVINDKYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y L L+LSK++ +G + G A + + R+F ++ I + +GM+E
Sbjct: 324 SYALADKLVLSKLRALLG-GQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
TVS DD F D +G ++PG Q KI + +E
Sbjct: 381 TVSCWDDKCFNPDSIGMSMPGAQVKIGENNE 411
>gi|108805260|ref|YP_645197.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766503|gb|ABG05385.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 612
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 4/216 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E +E V A LG+ER V I+ N W +D+ + G ++ T
Sbjct: 51 EFSFREVYRRVEDFASGLAGLGVERGSRVAIMSANRVGWTVADVAIMSLGAATVPIFPTL 110
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
P H L S A + VVE ++QL V+ ++ +V + GV+++ E+
Sbjct: 111 GPRQVAHILEDSGARVVVVEGERQLAA---VRGSGASVEHLVCMDEASAGGGVLAFSEVE 167
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
G + D + + ++ + TL+YTSGT G K V+L+H N+ N II+ +
Sbjct: 168 RRGARSRDPGWEARMLSLRREDVATLIYTSGTSGRQKGVILTHGNLLSNLEAIIEVVPIT 227
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S LPLSH+ +T + + T + A+
Sbjct: 228 DDDVG-LSILPLSHVLERTCSQFLNLVGGGTNYIAE 262
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ KV+ +G R R +SG A + L +F +P+ E +G++E + +V+ +D
Sbjct: 341 LVYRKVRAGLG-GRVRFCVSGGARLEPWLGEFFYGAGVPVAEGYGLTETSPVISVNRFED 399
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VG +P + ++ G GEI ++
Sbjct: 400 LRFGTVGPPLPNVEVRL-----SGEGEILVR 425
>gi|385264992|ref|ZP_10043079.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
gi|385149488|gb|EIF13425.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
Length = 546
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDRLCRQTAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLAHSDVSALIIMDSYRQTSYVEIVNKLIPELKTCERGRLRSKRYPFLRTVLYIGDKS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PGV WD L++ + D LD ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 PPGVHRWDSLLKDAESVTDAELDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S+ I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSSDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|218708425|ref|YP_002416046.1| long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
gi|218321444|emb|CAV17396.1| Long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
Length = 602
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 16/297 (5%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ + T++ A L GL + I N P+W +D ++ A +Y TN+
Sbjct: 36 ISWEQFGQQIDTLSLALLAQGLRVQDKIGIFSNNMPQWTVADFASLQARLVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---VISWDE 318
+ + +D I V + Q + + + +C +L+ +V D G +SW E
Sbjct: 96 AAQSSYIIQNADVKILFVGEQAQFDAAVSLFEECEQLEVVVAMSDDIDLQGHRFAVSWKE 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
M G LD L ++ TL+YTSGT G K VML + N+ + +
Sbjct: 156 FMARGVEDQQAELDVRLADACMDDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKGHDERLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD----KNALKVYKAT-QAAIDRA 433
L +S + FLPLSH+ + Y + A + D ++AL K T +A+ R
Sbjct: 216 LSKDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVKPTVMSAVPRF 274
Query: 434 NLKSISN-AQKIQKFEFLPADFSIPTGELGPTMKV-----KRP-FVVKKYQSIIDKF 483
K S +K+ K F+ +G + V + P F++KK ++ DK
Sbjct: 275 YEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQEGRTPSFMLKKSHALADKL 331
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y+
Sbjct: 547 QELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYN 596
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
++ L L+LSK++ +G G A + + R+F ++ I + +GM+E
Sbjct: 324 SHALADKLVLSKLRALLG-GNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG + KI DE G + ++ Y AK F + G
Sbjct: 381 TVSCWDDRCFNPDSIGMSMPGAEVKIGAKDEILVRGPMVMRGYYKMPEETAKTFDEHGF 439
>gi|398826558|ref|ZP_10584799.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
gi|398220933|gb|EJN07366.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
Length = 643
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 196 EEGNGEICLKE-------------YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
E GN EI L+E Y+ VR A ++LGL R + IIG N P+W +
Sbjct: 24 EHGN-EIALREKDLGLWRVFTWNDYQTRVRDFALGLIELGLGRNDVIGIIGDNRPDWVSA 82
Query: 243 DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV 302
++ GG + G+Y E + L +A + ED++Q++K+L + + P+LK I+
Sbjct: 83 EVATHAIGGLSLGLYRDVLDEEAAYLLTYGEAQLVFAEDEEQVDKLLTLAERVPRLKHII 142
Query: 303 QYE----GKPDKPGVISWDELMELGRAAP---DESLDRVLETIATNECCTLVYTSGTEGA 355
+ K D P ++S ++ ELGRA E DR+++ + L TSGT
Sbjct: 143 YSDPRGMRKYDDPRLMSAEKFAELGRARAAREPELYDRLVDATKGEDVAILCTTSGTTSH 202
Query: 356 SKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQ 398
K ML+ + + A + F + +S LPL I Q
Sbjct: 203 PKLAMLAAGRVLGHCATYLA-FDPKGPDDEYVSVLPLPWIMEQ 244
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
++ ++ +G R R + +G A + E ++F ++ +P+ ++G +E GA+T+
Sbjct: 331 VLFRALRDRLGFTRLRSAATGGAALGPETFKFFQAMGVPLRTLYGQTELLGAYTLHPEGK 390
Query: 175 FKLDGVGRTIPGT-QTKIVDPDEEGNGEICLK 205
D G + + + +I + D G GEI ++
Sbjct: 391 VDPDTTGVPMADSVEIRIDNADVHGVGEIVVR 422
>gi|240947866|ref|ZP_04752306.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus minor
NM305]
gi|240297828|gb|EER48264.1| putative long-chain-fatty-acid--CoA ligase [Actinobacillus minor
NM305]
Length = 588
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 6/225 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ V +++A L G+ V I N P W +DL + +Y TN
Sbjct: 34 DISWQAFQNQVDELSQALLAYGVNVQDRVAIFAQNMPNWTITDLAVLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISW 316
+ + L ++A I V D +QL+ +L + CP L+ IV KP D P VI W
Sbjct: 94 NANQTAYVLNHAEAKIIFVGDQEQLDVVLSIAENCPHLEKIVLM--KPNLSADNPRVIRW 151
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
++L + L L + ++ T++YTSGT G K VML NI
Sbjct: 152 EDLQAVKNRDFSAILAERLAERSLSDLFTILYTSGTTGEPKGVMLDFANIAHQLTAHDLA 211
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
S +SFLP SHI + Y + A + + N ++
Sbjct: 212 LPHIDEKDSSLSFLPFSHIFERAWVAYMLHRGATICYLENTNEVR 256
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 91 SLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSL 150
+L H+ + + + ++L L+LSK++ +G R+ G A + + +F ++
Sbjct: 294 ALFHWAIRTAQKGRKGFAFKLADKLVLSKLRALLG-GNIRMMPCGGAKLEPAIGAFFQAI 352
Query: 151 DIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEA 209
I I +GM+E + D F + +G+ +P + +I + +E G + ++ Y
Sbjct: 353 GINIKLGYGMTETTATVSCWEADGFNVKSIGKLMPNAEVRIGENNEILVRGGMVMRGYYK 412
Query: 210 NVRTVAKAFLKLGL 223
A AF + G
Sbjct: 413 KPEETASAFTEDGF 426
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF LP FS E+ PT+K++R ++++Y+ I+ Y
Sbjct: 534 KELAHFEQVKKFTLLPQAFSTKFEEITPTLKLRRKVIMERYRHYIEAMY 582
>gi|226226190|ref|YP_002760296.1| long-chain fatty-acid-CoA ligase [Gemmatimonas aurantiaca T-27]
gi|226089381|dbj|BAH37826.1| long-chain fatty-acid-CoA ligase [Gemmatimonas aurantiaca T-27]
Length = 379
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR A LG+ V ++ N PEW D + +Y T E + +
Sbjct: 56 VRRTALGLAHLGVVAEERVALLSENRPEWLIVDYACACSSFTDVPIYATLPSEQIPYLIN 115
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA--APD 328
S A + V +Q KI ++AQ P ++ ++ + + ++ EL +G A +P+
Sbjct: 116 DSGARVLFVSTPEQARKIQSIRAQIPGVQWVIGFAATKEHGCDMTLAELEAMGAANDSPE 175
Query: 329 E--SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSV 386
+ +A ++ TL+YTSGT G K VML+HDNI N + Q + ++ L+
Sbjct: 176 RATTFKEAALAVAPDKLLTLIYTSGTTGNPKGVMLTHDNIHSNVEGVRQVLNVGTSDLA- 234
Query: 387 ISFLPLSHIAAQTVDIYSVMT 407
+SFLPLSHI +T D Y T
Sbjct: 235 LSFLPLSHIFERTGDYYLFAT 255
>gi|84393678|ref|ZP_00992428.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
gi|84375677|gb|EAP92574.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
Length = 602
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 16/297 (5%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ + T++ A L GL + I N P+W +D ++ A +Y TN+
Sbjct: 36 ISWEQFGQQIDTLSLALLAHGLRVQDKIGIFSNNMPQWTVADFASLQARLVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---VISWDE 318
+ + +D I V + Q + + + +C +L+ +V D G +SW E
Sbjct: 96 AAQSSYIIQNADVKILFVGEQAQFDAAVSLFEECEQLEVVVAMSDDIDLQGHRFAVSWKE 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
M G LD L ++ TL+YTSGT G K VML + N+ + +
Sbjct: 156 FMARGVEDQQAELDVRLADACMDDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKGHDERLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD----KNALKVYKAT-QAAIDRA 433
L +S + FLPLSH+ + Y + A + D ++AL K T +A+ R
Sbjct: 216 LSKDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSDVKPTVMSAVPRF 274
Query: 434 NLKSISN-AQKIQKFEFLPADFSIPTGELGPTMKV-----KRP-FVVKKYQSIIDKF 483
K S +K+ K F+ +G + V + P F++KK ++ DK
Sbjct: 275 YEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQEGRTPSFMLKKSHALADKL 331
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y+
Sbjct: 547 QELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYN 596
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
++ L L+LSK++ +G G A + + R+F ++ I + +GM+E
Sbjct: 324 SHALADKLVLSKLRALLG-GNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG + KI DE G + ++ Y AK F + G
Sbjct: 381 TVSCWDDRCFNPDSIGMSMPGAEVKIGAKDEILVRGPMVMRGYYKMPEETAKTFDEHGF 439
>gi|145630709|ref|ZP_01786488.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
gi|144983835|gb|EDJ91285.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
Length = 599
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + ++ A L ++ + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSLALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIKTGSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|89075579|ref|ZP_01161984.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
gi|89048719|gb|EAR54291.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
Length = 607
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
+ ++ +A A L GL+ V I N P W +D +Y +Y T++ +
Sbjct: 41 FGEQIQQLALALLCQGLQVQDKVGIFSNNMPGWTIADFATLYNRCITVPIYPTSTEQQAA 100
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDELMELG 323
+ L + + V + Q++ +++ AQCP+L+ IV P+ P ++ ++
Sbjct: 101 YILQDASVKVLFVGEQAQMDAAVEIAAQCPQLERIVALSDDVTIPEHPLACHYNAFVKQA 160
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
+ D L ++ TL+YTSGT G K VML + NI Q L+
Sbjct: 161 SGEYQQEFDTRLAEKQMDDLVTLIYTSGTTGTPKGVMLDYANIASQIEAHDQRLALDEGD 220
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
S + FLPLSH+ + Y++ + +D N LK
Sbjct: 221 TS-LCFLPLSHVFERAWTFYALHRGVVNCYLSDTNKLK 257
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++KF LP FS+ GEL PT K++R + +Y I+ Y+
Sbjct: 547 KDLARFEQVKKFTLLPKSFSMDKGELTPTQKLRRKVIQDRYHKEIEHMYE 596
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y L ++LSK++ +G + G A + + R+F ++ I + +GM+E
Sbjct: 324 SYVLAEKVVLSKLQAVLG-GNIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD + D +G +PG + KI + +E G + ++ Y AK F + G
Sbjct: 381 TVSCWDDSCYNPDSIGMPMPGAEVKIGEQNEILVRGPMVMRGYYNMPEETAKNFTEDGF 439
>gi|448312176|ref|ZP_21501926.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
gi|445602683|gb|ELY56655.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
Length = 654
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 21/223 (9%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR ++ F LG++R V I EW D + AG +YT++SP + L
Sbjct: 73 VRKLSAGFHDLGVDRGDRVGIFANTRMEWAQCDFALLTAGAAITTVYTSSSPNQVEYLLD 132
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKPGVISWDELMELGRAAP 327
DA+ VVE++ LE++L+V+ + L+ IV ++EG D+ + + E+ + G
Sbjct: 133 DPDASAVVVENEALLERVLEVEDEL-DLEFIVSMDEFEGYDDRSDIHTLGEIYDRGEENF 191
Query: 328 D-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF--------- 377
D E+ + ++ + ++ +L+YTSGT G K V L+H N N + + +
Sbjct: 192 DREAYEARIDAVELDDLASLIYTSGTTGQPKGVQLTHWNFRSNVNAVRKRYGPRPDKADD 251
Query: 378 ----KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
ES A+ S+LPL+H+ +T + + A++ +A+
Sbjct: 252 VPTLDQESKAM---SYLPLAHVFERTAGHFVLFASGASVAYAE 291
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q +DR N + + I++FE +P +F+ L PTMK KR ++ +++ +
Sbjct: 587 RVREYIQQEVDRVN-EDFEKHETIKQFELVPREFTEENDMLTPTMKKKRRVIMDEFEDRV 645
Query: 481 DKFY 484
D+ Y
Sbjct: 646 DRMY 649
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + + +SG +S EL + + ++ +PI E +G++E + T + P+
Sbjct: 366 LVFSTVREALGGE-IELLISGGGSLSKELCQLYHAMGLPIYEGYGLTETSPVVTTNPPEA 424
Query: 175 FKLDGVGRTIPGTQTKI 191
K+ +G + G K+
Sbjct: 425 VKIGTIGPALDGVDLKV 441
>gi|383830743|ref|ZP_09985832.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
xinjiangensis XJ-54]
gi|383463396|gb|EID55486.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
xinjiangensis XJ-54]
Length = 609
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 7/215 (3%)
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
DE G+ + + V VA+ + LGL + I+ + PE +DL A AG
Sbjct: 37 DEPGSPTLDWAQVRDEVAAVARGLIDLGLRTGQRLVIMSPSRPEHIITDLAAANAGAIPC 96
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV--QYEGKP-DKP 311
Y+T S + + + S A I VV +L + V P L+ +V E P D
Sbjct: 97 TAYSTLSSDQIKYVVNHSSAPIAVVAGSDELSRWRPVLDDLPGLRQVVVLDREAVPEDDD 156
Query: 312 GVISWDELMELGRAAPDES---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
+S+ L E G A ES +R+ + I ++ +++YTSGT G K V+LSH N
Sbjct: 157 RFLSYAVLRERGSALHAESPETFERLTDVIEPDDPLSMIYTSGTTGVPKGVVLSHRN-AI 215
Query: 369 NAACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
+ A + L+ I++LPL+HIA + + IY
Sbjct: 216 HEAIAVHEMHAAPPHLANIAYLPLAHIAERELSIY 250
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+++ ++ +GLDR + SGAA + E+ + L + I EV+G+SE GA T + F
Sbjct: 344 VIAPLRVLLGLDRLLFASSGAAALPEEVLYFMAGLGVEIHEVWGLSETTGAATSNHAGAF 403
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN 235
+ VG+ + + + D +GE+ ++ + LG R +
Sbjct: 404 RAGSVGKPVADVEVAVAD-----DGELLVR----------GPIVFLGYLREDGSVEAATD 448
Query: 236 APEWFYS-DLGAIYAGGF 252
+ WF + D+G+I GF
Sbjct: 449 SEGWFATGDIGSIDDDGF 466
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 416 DKNALKVYKATQAAIDRA---NLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFV 472
D AL + A +A IDRA + ++ ++++++ L ++ TGEL PT+K+KR +
Sbjct: 537 DLTALADHPAVRAEIDRAVESANERLARVEQVKRYRLLTRAWTPETGELTPTLKLKRRVI 596
Query: 473 VKKYQSIIDKFYD 485
+Y+S ID YD
Sbjct: 597 TDRYRSDIDALYD 609
>gi|229514108|ref|ZP_04403570.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
gi|229349289|gb|EEO14246.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
Length = 601
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + LD ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQVRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDERLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
TVS DD F D +G ++PG Q KI + +E
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNE 411
>gi|419960854|ref|ZP_14476866.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
gi|414573737|gb|EKT84418.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
Length = 614
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 11/225 (4%)
Query: 188 QTKIVDPDE-----EGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T +DPD G+ + + ++Y + VR VA F +G+ R +V ++ N +++
Sbjct: 16 RTAAIDPDAIALRTVGDSQTLTWRQYSSQVREVAAGFAAVGVRRGDTVALMMANRVDFYP 75
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA++ G + +Y T P A + L ++A + V E + +E+I + A ++ +
Sbjct: 76 VDVGALHVGATSFSIYNTLPPSAIAYVLGNAEAKVVVCE-AQYVERIRESGALLEQI-VV 133
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ E G ++ D++ LG +P+ D ++ ++ TL+YTSGT G K V
Sbjct: 134 IDAEAGIAPAGTLTLDQMKALG--SPEFDFDAAWRSVRPDDVATLIYTSGTTGNPKGVES 191
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVM 406
+H + F A + +E + SF+P +HIA + +Y M
Sbjct: 192 THAALLFEAGAVCWILPIEFGD-RITSFMPSAHIADRMTALYFQM 235
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 49 AAQYPDQVALCQKQENGEWKKVTYKLQTTGVKRWIANY---AKSTSLQHYMAYLEKN--- 102
AA PD C+ G +V KL+ V+R +AN A+ +LQ + +
Sbjct: 251 AAAVPD----CRPTIWGAVPRVWEKLKI-AVERAVANEPDDARRRALQWGLEVGARRIEL 305
Query: 103 ------VSEPYTYRLVRW--LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPI 154
V E + V+ ++L+ ++ +G D+ R ++SGAAPI + +F L + I
Sbjct: 306 LRVGLPVPEELEHEFVKAESMVLAPMRAELGFDKLRWAVSGAAPIPADTLAFFAGLGLQI 365
Query: 155 CEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG-NGEICLKEYEANVRT 213
E++GMSE + + D KL VG+ +PG ++ + E G + +K Y
Sbjct: 366 SEIWGMSELTCIASAAPADPAKLGTVGKIVPGMDMRVANDGELFVRGPLVMKGYRGEPAK 425
Query: 214 VAKA 217
A A
Sbjct: 426 TADA 429
>gi|374310351|ref|YP_005056781.1| long-chain-fatty-acid--CoA ligase [Granulicella mallensis MP5ACTX8]
gi|358752361|gb|AEU35751.1| Long-chain-fatty-acid--CoA ligase [Granulicella mallensis MP5ACTX8]
Length = 585
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 8/219 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K + VR VA G+ + V ++ N EW +D A+ G +Y T +
Sbjct: 34 ITSKAFYGRVRAVAAKLKSWGIGKGDRVALVSENRWEWAATDFAALAMGVVDVPLYQTLT 93
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-EGKPDKPGVISWDELM 320
PE + L S A V Q K++ + P L+ +V + EG D G S+ E++
Sbjct: 94 PEQMGYMLRNSGAKAIFVSTKAQYLKVVAA-GEIPSLEHVVVFDEGSFD--GAESFAEIV 150
Query: 321 ELGRAAP--DESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ A D + D +++ + + T++YTSGT G K VML+H N+ N + F
Sbjct: 151 KDSAALEQRDATFDAMVKEVKPEDLATIIYTSGTTGDPKGVMLTHGNLASNMRYSTEGFG 210
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ +S ISFLPLSH+ A+ +D Y++ + A L + K
Sbjct: 211 IVQGDIS-ISFLPLSHVTARHLD-YALYGLKAVLAYCPK 247
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++TG+K+ I +A + L + ++L L+ SK+++A G R R+ ++
Sbjct: 280 KSTGMKKRILEWAVGRGKANRKKLLLGEEPKGLGWQLANKLVYSKIREAFG-GRARIFIA 338
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
G AP+ + +FL + I I E +GM+E + + D +++ VG +P +T+I +
Sbjct: 339 GGAPLGMDSAEWFLDVGIRIFEGYGMTETSPVIARNMFDGYRIGTVGPIVPNMETRIAED 398
Query: 195 DE 196
E
Sbjct: 399 GE 400
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 35/47 (74%)
Query: 438 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+++ + I+K +P ++S+ GEL P+MK+KR +++KY+S I+KFY
Sbjct: 537 LAHYEAIKKIGVVPEEWSVDGGELTPSMKLKRRVILEKYKSQIEKFY 583
>gi|153216942|ref|ZP_01950706.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|419830916|ref|ZP_14354401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|419834601|ref|ZP_14358055.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|422918315|ref|ZP_16952629.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|423823214|ref|ZP_17717222.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|423857175|ref|ZP_17721024.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|423884451|ref|ZP_17724618.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|423998737|ref|ZP_17741987.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|424017639|ref|ZP_17757465.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|424020556|ref|ZP_17760337.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|424625937|ref|ZP_18064396.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|424630421|ref|ZP_18068703.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|424634468|ref|ZP_18072566.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|424637547|ref|ZP_18075553.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|424641450|ref|ZP_18079330.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|424649523|ref|ZP_18087183.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|443528441|ref|ZP_21094477.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
gi|124114037|gb|EAY32857.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|341635360|gb|EGS60078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|408011114|gb|EKG48950.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|408017056|gb|EKG54578.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|408022056|gb|EKG59285.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|408022492|gb|EKG59701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|408031293|gb|EKG67929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|408053493|gb|EKG88507.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|408620689|gb|EKK93701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|408634322|gb|EKL06585.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|408639779|gb|EKL11586.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|408640101|gb|EKL11902.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|408648734|gb|EKL20069.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|408852179|gb|EKL92023.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|408858681|gb|EKL98353.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|408866754|gb|EKM06131.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|443453260|gb|ELT17091.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
Length = 601
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + L+ ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLNALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|262404795|ref|ZP_06081350.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
gi|262349827|gb|EEY98965.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
Length = 601
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+++ + ++ A L G+ + I N P W +D A+ +Y TN+PE
Sbjct: 39 QQFGEQLDALSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQ 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---VISWDELME 321
+ L +DA + V + Q + L QCP+L+ IV D + WD+ +
Sbjct: 99 AAYILQNADAKVVFVGEQPQFDAALSQFEQCPELRLIVAMNANIDLKQADCAMHWDDFVT 158
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
+ L ++E ++ TL+YTSGT G K VML + NI Q L
Sbjct: 159 QHQTQDHTQLFELIEQANFDDLFTLIYTSGTTGTPKGVMLDYRNIGSQLEGHDQRLNLNE 218
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+S + FLPLSH+ + Y + A + D
Sbjct: 219 EDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLHD 252
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++L L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQLADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
T+S DD F D +G ++PG Q KI + +E
Sbjct: 381 TISCWDDHCFNPDSIGLSMPGAQVKIGENNE 411
>gi|448388126|ref|ZP_21565066.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445670777|gb|ELZ23374.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 652
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 15/221 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR ++ F LG++ V + EW D + AG +YT++SP+ + L
Sbjct: 73 VRKLSAGFHDLGIDAGDRVGLFSNTRMEWAQCDFALLSAGAAVTTVYTSSSPKQVEYLLG 132
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPK--LKAIVQYEGKPDKPGVISWDELMELGRAAPD 328
DA+ VVE++ LE++L+V+ + + +I + +G D+ V + DE+ + G D
Sbjct: 133 DPDADAVVVENEALLERVLEVEDELDLEFVVSIDELDGYDDRDDVYTLDEVYDRGTETFD 192
Query: 329 -ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF---------- 377
E+ + L+ + ++ +L+YTSGT G K V L+H N N I + F
Sbjct: 193 LEAYEERLDAVELDDLASLIYTSGTTGQPKGVRLTHWNFRSNVNAIRKRFARRPDRDDDV 252
Query: 378 -KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
L+ +L+ +S+LPL+H+ +T + + + + +A+
Sbjct: 253 PTLDEESLA-MSYLPLAHVFERTAGHFVLFASGSCIAYAEN 292
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + + +SG +S EL R + ++ +PI E +G++E + + PD
Sbjct: 366 LVFSTVREALGGN-IDLLISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVVATNPPDA 424
Query: 175 FKLDGVGRTIPGTQTKI 191
K+ +G + +I
Sbjct: 425 AKIGTIGPAVSNVDLRI 441
>gi|342904876|ref|ZP_08726672.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
gi|341952332|gb|EGT78862.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
Length = 602
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L + + I N W D+ + +Y TN
Sbjct: 34 DISWKNFQDQLNQLSRALLAHNIGVQDKIAIFAHNMERWTIVDIATLQVRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q +++L++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQVLEIADHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIKTGSNAQQNELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLEAHDLSLNVTDQDVSLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKTVPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y+
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEDMYN 595
>gi|421352186|ref|ZP_15802551.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
gi|395952631|gb|EJH63245.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
Length = 601
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + L+ ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLNALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|408827472|ref|ZP_11212362.1| AMP-dependent synthetase and ligase [Streptomyces somaliensis DSM
40738]
Length = 598
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +E+ A VR AK + G+ V ++ EW D AG +Y T+
Sbjct: 45 DVTAREFLAEVRAAAKGLIAQGVRPGDRVALMSRTRYEWVRMDFAVWSAGAVTVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A +VE E + V+ P+L+ + + + G + +EL+
Sbjct: 105 SPEQIQWILGDSGAVAAIVESAAHAEAVESVRGALPELRHVWRID-----DGAV--EELV 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
+GR D +LD + ++ T+VYTSGT G K +L+H N +++
Sbjct: 158 AVGRDVSDRTLDERGASARADDVATIVYTSGTTGRPKGCVLTHRNFFAECGNVVERLGPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLP +H+ + V++ +V+
Sbjct: 218 FRTGRSSVLLFLPTAHVFGRMVEVAAVL 245
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L L+ +K++ +G RC ++SG AP+ L +F + + E +G++E A
Sbjct: 326 HKLYDVLVYAKLRAVLG-GRCEFAISGGAPLGERLGHFFSGVGFTVLEGYGLTESCAATA 384
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYH 227
+ D K+ VG+ +PG++ +I D E +GE Y N A+A
Sbjct: 385 FNPWDRQKIGTVGQPLPGSKVRIADDGEVLLHGEHVFAGYWNNEEATAEAL--------- 435
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLE 286
A WF++ D+G + G+ A T + L + V+ED
Sbjct: 436 --------ADGWFHTGDVGTLDEDGYLA---ITGRKKEILVTAGGKNVAPAVIED----- 479
Query: 287 KILKVKAQCPKLKAIVQYEGKPDKPGVISWDE 318
+++ + +V +G+P +I+ DE
Sbjct: 480 ---RIRGHALVAECMVVGDGRPFVGALITLDE 508
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q A+D N ++S A+ ++KF L F+ G + P++K+KR V K + I+ Y
Sbjct: 540 QRAVDDGN-AAVSKAESVRKFRVLSTQFTEEAGHITPSLKLKRSVVAKDFADEIEAIY 596
>gi|422577234|ref|ZP_16652770.1| AMP-binding enzyme [Propionibacterium acnes HL001PA1]
gi|314921998|gb|EFS85829.1| AMP-binding enzyme [Propionibacterium acnes HL001PA1]
Length = 646
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYVETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + V K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + SA S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTSADHS-LSFLPLSH 267
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ +G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDVIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|183601568|ref|ZP_02962938.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis HN019]
gi|219683897|ref|YP_002470280.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190933|ref|YP_002968327.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|384193928|ref|YP_005579674.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|384195491|ref|YP_005581236.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|387820800|ref|YP_006300843.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|387822474|ref|YP_006302423.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|423679460|ref|ZP_17654336.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183219174|gb|EDT89815.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis HN019]
gi|219621547|gb|ACL29704.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis AD011]
gi|240249325|gb|ACS46265.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|295793922|gb|ADG33457.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|345282787|gb|AEN76641.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|366041104|gb|EHN17608.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386653501|gb|AFJ16631.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|386655082|gb|AFJ18211.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 686
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E ++R VAK + GL + V + + EW D + GG A +Y T+S E
Sbjct: 123 RETLDDIRQVAKGLMHQGLRKGDGVAFMCHTSYEWDVFDGAVLSIGGVIATIYDTDSAEQ 182
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + VVE ++K K CP LK ++ E + DEL G
Sbjct: 183 IRNIVDNSDAKLLVVETKDMMKKTDLAKEDCPTLKDVMCLENG-------ALDELKAYGS 235
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
+ DE LD + ++ + C++VYTSG+ A K V ++ + A + Y L +
Sbjct: 236 SISDEKLDERIRSVKKTDLCSIVYTSGSTAAPKGVEMTQAHYCSTATNLPDYMPDLLHNK 295
Query: 383 ALSVISFLPLSHIAAQTVD 401
V+ FLP +H A+ ++
Sbjct: 296 RNRVLLFLPQAHSFARAIN 314
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 411 TLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRP 470
T+ A +NA V Q +D+AN + +S A+ ++KF LP +F+ G + +MK+ RP
Sbjct: 601 TMEDAAQNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKIIRP 658
Query: 471 FVVKKYQSIID 481
V+K+Y ++++
Sbjct: 659 KVLKRYNTLLN 669
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 57 ALCQKQENGEWKKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLI 116
A QK NG +V + ++++ ++ ++ +N+ +P Y
Sbjct: 358 AASQKAGNGPKGRV-FAASVVAAQKYMQEVSEKGKASRFVT-ARRNMFDPMVY------- 408
Query: 117 LSKVKQAMGLDRC-RVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA---HTVSAP 172
S ++ A+G C + ++G AP+ +L +F IP+ E +G++E + ++ P
Sbjct: 409 -SSIRDALG--GCAKWIVTGGAPLDPDLMAFFRGAGIPVYEGYGLTETTAPCAFNPLTVP 465
Query: 173 DDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
+ VG PG Q +I D +E + G K Y N +F G R
Sbjct: 466 --YHQGSVGIPFPGFQVRIGDGNEIQVKGVPVFKRYHKNEEETELSFTDDGWYR 517
>gi|282854516|ref|ZP_06263852.1| AMP-binding enzyme [Propionibacterium acnes J139]
gi|386070420|ref|YP_005985316.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes ATCC 11828]
gi|282582377|gb|EFB87758.1| AMP-binding enzyme [Propionibacterium acnes J139]
gi|353454786|gb|AER05305.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes ATCC 11828]
Length = 644
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 56 GGQWIIRTYVETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 115
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + V K+L++IL+ + Q P L+ ++
Sbjct: 116 GVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAGPKELDRILEARDQMPGLETVILINPADQ 175
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 176 VGDHDGLTVLSLEQVRQAGVS---EEIQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 232
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + SA S +SFLPLSH
Sbjct: 233 ISHRAALAELQALDAFFDVTSADHS-LSFLPLSH 265
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 365 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 423
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 424 YKFGTAGRPLVGSQMTTTE-----DGEILYR 449
>gi|422457633|ref|ZP_16534291.1| AMP-binding enzyme [Propionibacterium acnes HL050PA2]
gi|315105302|gb|EFT77278.1| AMP-binding enzyme [Propionibacterium acnes HL050PA2]
Length = 646
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYVETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + V K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + SA S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTSADHS-LSFLPLSH 267
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|422389284|ref|ZP_16469381.1| AMP-binding family protein [Propionibacterium acnes HL103PA1]
gi|422462807|ref|ZP_16539427.1| AMP-binding enzyme [Propionibacterium acnes HL060PA1]
gi|422467062|ref|ZP_16543619.1| AMP-binding enzyme [Propionibacterium acnes HL110PA4]
gi|422470524|ref|ZP_16547044.1| AMP-binding enzyme [Propionibacterium acnes HL110PA3]
gi|422565548|ref|ZP_16641196.1| AMP-binding enzyme [Propionibacterium acnes HL082PA2]
gi|314965955|gb|EFT10054.1| AMP-binding enzyme [Propionibacterium acnes HL082PA2]
gi|314980722|gb|EFT24816.1| AMP-binding enzyme [Propionibacterium acnes HL110PA3]
gi|315090959|gb|EFT62935.1| AMP-binding enzyme [Propionibacterium acnes HL110PA4]
gi|315095182|gb|EFT67158.1| AMP-binding enzyme [Propionibacterium acnes HL060PA1]
gi|327328811|gb|EGE70571.1| AMP-binding family protein [Propionibacterium acnes HL103PA1]
Length = 646
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYVETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + V K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + SA S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTSADHS-LSFLPLSH 267
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|422923777|ref|ZP_16956920.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
gi|341643515|gb|EGS67800.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
Length = 601
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + L+ ++E ++ TL+YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLNALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|255533613|ref|YP_003093985.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
gi|255346597|gb|ACU05923.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
Length = 590
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 10/214 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E+ V +++ ++LG+ + V ++ N PEW +D + G + +Y T +
Sbjct: 39 QEFSDTVDALSRGLIELGIGKASRVAVMSANRPEWNITDFAVMQIGAYHIPLYPTLAEHD 98
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
L ++ + V D+ K+ K C +LK +Q + G +W L++ G+
Sbjct: 99 VKFILENAEITVIFVADEPLYNKL---KPVCEELKKDIQIYTFDEVKGAGNWQTLVKTGQ 155
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI--TFNAACIIQYFKLESA 382
+ L+ I + TL+YTSGT G K VML+H+N+ F + ++ L
Sbjct: 156 QKTETDLEAYRSQITPEDILTLIYTSGTTGTPKGVMLTHNNLVKNFENSAVL----LPDG 211
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPLSHI + V +Y M +++A+
Sbjct: 212 IRKGLSFLPLSHIFERMV-VYLYMYCDTAVYYAE 244
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 382 AALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNA 441
AAL V +F+ L AA+ Y+ A KN + K Q ++ K
Sbjct: 488 AALIVPNFVALKSWAAKKGINYTTDEEMA------KNPQVIEKFNQIVLNSG--KDFGKW 539
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+++++FE L +SI GEL P + +KR +++KY +II+K Y
Sbjct: 540 EQVKRFELLAKPWSIDGGELTPKLSLKRKVILEKYATIIEKIY 582
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEK-NVSEPYTYRL----VRWLILSKVKQAMGLDRCRV 131
TG+KR I ++ +A EK + + Y L R L+ K ++A+G V
Sbjct: 283 TGIKRGIFFWS--------VALAEKFEIENSWFYNLKLGIARKLVFKKWQEALG-GEIVV 333
Query: 132 SLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKI 191
+SG A ++ L R F + +P+ E +G++E + TV+ + VG I G + KI
Sbjct: 334 IISGGAALNPRLARIFWAAGMPVFEGYGLTETSPVITVNHFGNTMFGTVGPPINGVEVKI 393
Query: 192 VDPDE 196
+ E
Sbjct: 394 AEDGE 398
>gi|419839901|ref|ZP_14363302.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
gi|386909003|gb|EIJ73687.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
Length = 602
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 129/309 (41%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D Q ++ ++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQDQYDQAFEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+E G + L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIETGSNVQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLEAHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKTVPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y+
Sbjct: 546 KELAHFEQVKKFTLLSRAFSIKLGEITPTLKLRRKVILERYRKQIEDMYN 595
>gi|417840982|ref|ZP_12487090.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
gi|341950793|gb|EGT77380.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
Length = 602
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CP+L+ IV + P SW+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPQLQKIVAMKSTIQLQQDPLSCSWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G + L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIKTGSNVQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLEAHDLSLNVTDQDVSLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y+
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEDMYN 595
>gi|452957933|gb|EME63290.1| long-chain-fatty-acid-CoA ligase, FadD11 [Rhodococcus ruber BKS
20-38]
Length = 612
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P +G G ++ V +A + LG+E V I EW +D + AG
Sbjct: 43 PQGDGWGSTTWQQVGDRVTALAAGLITLGVEPEDPVAIASSTRYEWVLADFAIMCAGAAT 102
Query: 254 AGMY-TTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
+Y TTN+P+ + S + + V ED Q++K++ +A P ++ +V +G+ D
Sbjct: 103 TTIYPTTNAPDVAF-IVANSGSAVVVAEDWTQVDKLVAHRADLPDVRTVVVVDGEGDGDW 161
Query: 313 VISWDELMELGRA----APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
V++ +L GRA +P DRV + I + +++YTSGT G K V+L H T+
Sbjct: 162 VVTLADLETRGRALLADSPSVVADRV-DAIRPEQLASIMYTSGTTGKPKGVLLPHSGWTY 220
Query: 369 NAACIIQYFKLESAALSVISFLPLSH 394
AA + L L+ + +LPLSH
Sbjct: 221 TAAAVDAVNILGPDDLNFL-WLPLSH 245
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEK---NVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLS 134
G K+ I ++A L+ A E +V + YR+ L+ S VK+ G R R +S
Sbjct: 306 GAKKRIFDWAVGVGLRVSQARQEGRTPSVLDRLRYRIADRLVFSTVKERFG-GRLRFFVS 364
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
AAP+ + ++F + I I E +G++E + A ++ P ++L VG PGT+ +I +
Sbjct: 365 AAAPLDRAVAQWFDAAGIIILEGYGLTETSAASFINRPYAYRLGTVGWPFPGTEVQIAE- 423
Query: 195 DEEGNGEICLK 205
+GE+ L+
Sbjct: 424 ----DGEVLLR 430
>gi|384191183|ref|YP_005576931.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|384192328|ref|YP_005578075.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
gi|289178675|gb|ADC85921.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|340365065|gb|AEK30356.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
Length = 690
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E ++R VAK + GL + V + + EW D + GG A +Y T+S E
Sbjct: 127 RETLDDIRQVAKGLMHQGLRKGDGVAFMCHTSYEWDVFDGAVLSIGGVIATIYDTDSAEQ 186
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + VVE ++K K CP LK ++ E + DEL G
Sbjct: 187 IRNIVDNSDAKLLVVETKDMMKKTDLAKEDCPTLKDVMCLENG-------ALDELKAYGS 239
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
+ DE LD + ++ + C++VYTSG+ A K V ++ + A + Y L +
Sbjct: 240 SISDEKLDERIRSVKKTDLCSIVYTSGSTAAPKGVEMTQAHYCSTATNLPDYMPDLLHNK 299
Query: 383 ALSVISFLPLSHIAAQTVD 401
V+ FLP +H A+ ++
Sbjct: 300 RNRVLLFLPQAHSFARAIN 318
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 411 TLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRP 470
T+ A +NA V Q +D+AN + +S A+ ++KF LP +F+ G + +MK+ RP
Sbjct: 605 TMEDAAQNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKIIRP 662
Query: 471 FVVKKYQSIID 481
V+K+Y ++++
Sbjct: 663 KVLKRYNTLLN 673
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 57 ALCQKQENGEWKKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLI 116
A QK NG +V + ++++ ++ ++ +N+ +P Y
Sbjct: 362 AASQKAGNGPKGRV-FAASVVAAQKYMQEVSEKGKASRFVT-ARRNMFDPMVY------- 412
Query: 117 LSKVKQAMGLDRC-RVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGA---HTVSAP 172
S ++ A+G C + ++G AP+ +L +F IP+ E +G++E + ++ P
Sbjct: 413 -SSIRDALG--GCAKWIVTGGAPLDPDLMAFFRGAGIPVYEGYGLTETTAPCAFNPLTVP 469
Query: 173 DDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLER 225
+ VG PG Q +I D +E + G K Y N +F G R
Sbjct: 470 --YHQGSVGIPFPGFQVRIGDGNEIQVKGVPVFKRYHKNEEETELSFTDDGWYR 521
>gi|419802454|ref|ZP_14327641.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|419846035|ref|ZP_14369293.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
gi|385190316|gb|EIF37764.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|386414665|gb|EIJ29217.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
Length = 605
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I ++ + ++ AFL ++ + I N W +D+ A+ +Y TN
Sbjct: 34 DISWNSFQQQLDQLSLAFLACNIQVQDKIAIFAHNMSRWTIADIAALQVRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ QCP+L+ IV + + + WD
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHQCPQLQKIVAMKEQIQLTETTLSCYWD 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
EL++LG A + L ++ T++YTSGT G K VML ++N+
Sbjct: 154 ELIQLGAAEFQAEFETRLANKTMDDLFTIIYTSGTTGEPKGVMLDYNNLAHQLEAHDIAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ +S +SFLP SHI + Y + A + + N ++
Sbjct: 214 DVNQDEVS-LSFLPFSHIFERAWVAYVLHRGAILCYLENTNQVR 256
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 34/49 (69%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FS+ GE+ PT+K++R ++++Y+ IID Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSVKLGEITPTLKLRRKVIMERYRHIIDSMY 594
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 99 LEKNVSEPY----TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPI 154
L +N P+ Y + L+ SK++ +G R ++ G A + + +F + I I
Sbjct: 310 LSQNKKVPFFLQKCYVIADKLVFSKLRSLLG-GRIKMMPCGGAKLEPSIGLFFHCIGINI 368
Query: 155 CEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANV 211
+GM+E TVS DD F + +G+ +P T+ KI + +E G + +K Y
Sbjct: 369 KLGYGMTETTA--TVSCWDDHHFNPNSIGKLMPNTEVKIGENNEILVRGGMVMKGYYKKP 426
Query: 212 RTVAKAFLKLGL 223
+AF + G
Sbjct: 427 EETTQAFTEDGF 438
>gi|229845424|ref|ZP_04465554.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
gi|229811620|gb|EEP47319.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
Length = 599
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L + + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLTHNIGVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDHEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIKTGSNAQQNELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFY---WAISVGQKHFDLRANNKTVPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|145641871|ref|ZP_01797446.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
gi|145273493|gb|EDK13364.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.4-21]
Length = 385
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L + + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIGVQDKIAIFAHNMEHWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+E A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIETDSNAQQDELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKYFDLRANNKTVPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
>gi|392415088|ref|YP_006451693.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium chubuense
NBB4]
gi|390614864|gb|AFM16014.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium chubuense
NBB4]
Length = 634
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P+ G + ++ + V +A + LG+E V + EW D + AG
Sbjct: 65 PENGGWTSVTWQQVDQRVHRIAAGLIALGVEPEDRVGLASSTRYEWVLVDFAVLCAGAAT 124
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y T + + S + + V ED Q++K+L +A+ P ++ +V +G D V
Sbjct: 125 TTLYPTTNARDVAFIVANSGSRVVVAEDQAQVDKLLTHRAELPDVEKVVIIDGPGDGDFV 184
Query: 314 ISWDELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
I+ D L LG A + ++R +E I + +++YTSGT G K V L H T+ A
Sbjct: 185 ITLDGLETLGEQVLATSPDVVERRVEAIRPDHLASIIYTSGTTGRPKGVRLPHRAWTYTA 244
Query: 371 ACIIQYFKLESAALSVISFLPLSH 394
A I L + + + +LPL+H
Sbjct: 245 AAIDALGILHADDVHFL-WLPLAH 267
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 20/179 (11%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPY---TYRLVRWLILSKVKQAMGLDRCRVSLS 134
G+K+ I ++A ++ A + P + + L+ S ++ G R R +S
Sbjct: 328 GLKKRIFDWAVHVGIRASQAREDGRSVPPLLAIQHAIADRLVFSTIRDRFG-GRLRFFVS 386
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP 194
AAP++ ++ R+F ++ I + E +G++E A A ++ PD ++ VG PGT+ KI
Sbjct: 387 AAAPLNRDIARWFDAIGIIVLEGYGLTETAAASVINRPDAYRFGTVGLPFPGTEIKIA-- 444
Query: 195 DEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
G+GEI ++ V T G +A WFY+ D+GAI GF
Sbjct: 445 ---GDGEILVR--SPGVMT--------GYHDLPQATAEALDADGWFYTGDIGAIDVDGF 490
>gi|390942646|ref|YP_006406407.1| AMP-forming long-chain acyl-CoA synthetase [Belliella baltica DSM
15883]
gi|390416074|gb|AFL83652.1| AMP-forming long-chain acyl-CoA synthetase [Belliella baltica DSM
15883]
Length = 584
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 6/212 (2%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
KE+++ V ++ AF+ G+ V II N PEW + DL G + MY T S +
Sbjct: 37 KEFKSIVDNLSLAFISAGIAPSEKVAIISDNRPEWNFIDLALQQIGAISVPMYPTISADD 96
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ ++ + V +D+ +K K+ + ++K I+ ++ +W++ M+ G
Sbjct: 97 YKYIFEHAEVKMVFVGNDEIYQK-AKIATEDTEIK-ILSFD---QLDACQNWEDFMKSGE 151
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAAL 384
+ L+ E I +++ T++YTSGT G K VMLSH NI N + +
Sbjct: 152 SGNLADLESKKEKIKSDDLFTIIYTSGTTGRPKGVMLSHRNIIHNLMAVEDRLVIPKGTS 211
Query: 385 SVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLPL HI +T + M + ++++A+
Sbjct: 212 KALSFLPLCHIYERTGS-FCFMYMGVSIYYAE 242
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTY----RLVRWLILSKVKQAMGLDRCRVS 132
TG+KR + +A + L++ E N S+ + Y L +I SK ++A+G + +++
Sbjct: 281 TGLKRSLFFWALNLGLKY-----EPNKSQGFWYDFQLNLANKIIFSKWREALGGNILQIN 335
Query: 133 LSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPD--DFKLDGVGRTIPGTQTK 190
SGA+ + L R F S IP+CE +G++E + + S + D ++ VG+ + Q K
Sbjct: 336 -SGASALQPRLARVFWSAGIPVCEGYGLTETSPVVSASVCNLRDIRIGYVGKLVNEVQVK 394
Query: 191 IVDPDEEGNGEICLK 205
I + +GEI +K
Sbjct: 395 IAE-----DGEILVK 404
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q ID+ N K ++I++F+ LP + I +GE+ PTMK+KR + K++ I+ Y
Sbjct: 527 QREIDQLN-KYFGKWEQIKRFKLLPKSWGIESGEMTPTMKLKRKVIHSKFEKEIEGLY 583
>gi|145636795|ref|ZP_01792461.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
gi|145270093|gb|EDK10030.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
Length = 599
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L + + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQDQLNQLSRALLAHNIGVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++ G A L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIKTGSNAQQNELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|149907514|ref|ZP_01896261.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
gi|149809184|gb|EDM69113.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
Length = 595
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
N VAKA L LG E V I+ N PEW ++DLG + A +Y TN+ E + +
Sbjct: 41 NSDRVAKALLFLGCEVQAKVGILANNRPEWSFADLGILAARCVTVPIYPTNTTEQTRYIV 100
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---VISWDELMELGRAA 326
+D + V +Q +K L++ A LK I+ D G + + ++ G A
Sbjct: 101 KNADIDYLFVGGQEQFDKALELLA-TDDLKLIIALTDVIDLKGESNAMHFSAFIQQGNQA 159
Query: 327 PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL--ESAAL 384
D ++ L ++ TL+YTSGT G K VML + N AA + K+ S
Sbjct: 160 SDAEFEQRLTDANMDDLVTLIYTSGTTGQPKGVMLDYTNF---AAAFASHDKMIDVSETD 216
Query: 385 SVISFLPLSHIAAQTVDIY 403
+ I+FLPLSH+ +T Y
Sbjct: 217 TSIAFLPLSHVLERTWSFY 235
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 33/48 (68%)
Query: 438 ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
++N +K++KF+ L +F + GE+ PT+K++R + +Y+ ID+ Y+
Sbjct: 544 LANFEKVKKFKLLNREFCMKKGEITPTLKLRRKVIESEYKKDIDEMYN 591
>gi|407693103|ref|YP_006817892.1| FAA1 protein [Actinobacillus suis H91-0380]
gi|407389160|gb|AFU19653.1| FAA1 protein [Actinobacillus suis H91-0380]
Length = 592
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 27/237 (11%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I +++++ + V+ A L G+ + I N P+W +DLGA+ +Y TN
Sbjct: 36 DISWQDFQSQIDKVSLALLAHGIGIQDKIGIFAHNMPQWTIADLGALQIRAVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI------ 314
+ + + +D + V D +QL+ L++ CP L+ I+ KP GV+
Sbjct: 96 TAKQAELIINNADIKLLFVGDQEQLDVALEIAKNCPSLEKIIVM--KPHLEGVLDNASSS 153
Query: 315 -SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
W++ + L R L +I ++ T++YTSGT G K VML N+
Sbjct: 154 CGWNDFLGKSSEKYRSELIRCLSSIQLDDLFTIIYTSGTTGTPKGVMLDFSNLA------ 207
Query: 374 IQYFKLESAALSV---------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+L++ L++ +SFLP SHI + Y + A + D N ++
Sbjct: 208 ---HQLQAHDLALPEVGPDDVSLSFLPFSHIFERAWVAYLLHKGATVCYLEDTNEVR 261
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ +++ ++I+KF LP FSI EL PT+K++R ++++Y+ I+ Y+
Sbjct: 543 QELAHFEQIKKFTLLPQAFSIHMEELTPTLKLRRKVILERYRPQIEAMYN 592
>gi|261211577|ref|ZP_05925865.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
gi|260839532|gb|EEX66158.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
Length = 601
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ + + ++ A L G+ + I N P W +D + +Y TN+
Sbjct: 36 ISWQQFGSQIDALSMALLAQGIGVQDKIAIFANNMPRWTVADFATLQIRAVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---VISWDE 318
PE + L +DA + V D Q + L + QCP+L+ IV + + WD+
Sbjct: 96 PEQAAYILQNADAKVVFVGDQPQFDAALSLFEQCPELRLIVAMNPNIELKQADCAMHWDD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ + L ++E ++ TL+YTSGT G K VML + NI Q
Sbjct: 156 FVTSHQTQDRAPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLN 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LTEEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLHD 252
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++L L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQLADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLEKETAESFDENGF 439
>gi|385679999|ref|ZP_10053927.1| AMP-binding protein [Amycolatopsis sp. ATCC 39116]
Length = 603
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
Y V VA +LG+E V I N PEW +DL G + G+Y T+
Sbjct: 47 YAERVANVAAGLRELGVEPGDRVAIHAENRPEWVVADLAVQGIGAISMGVYPTSPETEVE 106
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISWDELMEL 322
+ L S A + + ED++QL+K L V+ + P L+ +V + + + P ++++++L E
Sbjct: 107 YLLSHSGAKVLIAEDEEQLDKALAVRGRLPDLRRLVVMDPRGVRVEALPDLMTFEQL-ER 165
Query: 323 GRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
R D +L E+++ + LVYTSGT G K M+SH N+ I
Sbjct: 166 PR---DNALRDYQESVSRLDPDATAILVYTSGTTGPPKGAMISHANLVAAGRTFIDALG- 221
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
V+S+LPL HIA + + + + + F +
Sbjct: 222 GGPDDEVLSYLPLCHIAERLTSVIDSVWAGSVVNFGE 258
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 16/143 (11%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L +L+ +++ +GL R R +LSGAAPI+ ++ Y ++ +P+ E +G +E T++
Sbjct: 333 LAEFLVFRALREKLGLVRVRTALSGAAPIAPQVLEYLWAIGVPVREGYGQTENTALATLT 392
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVC 230
D +L VGR +PG + +I + +GEI + A + G R
Sbjct: 393 PDGDVRLGAVGRPLPGVEVRIAE-----DGEILTR----------SAGVFQGYFRNPEAT 437
Query: 231 IIGFNAPEWFYS-DLGAIYAGGF 252
+A W ++ D+G I A GF
Sbjct: 438 AAAVDADGWLHTGDVGEIDADGF 460
>gi|406910414|gb|EKD50442.1| hypothetical protein ACD_62C00542G0002 [uncultured bacterium]
Length = 595
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 3/202 (1%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E + V +A + G+++ V II EW +DLG + A G +Y +N+
Sbjct: 38 EVKDRVMKIAGGLRQRGIQKGDRVAIISKTRHEWTLADLGIMAASGVTVPIYESNTSTQA 97
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG--VISWDELMELG 323
+ L S A I +VE++ QL+KIL VK P L IV + P + S D++M
Sbjct: 98 AYILENSQAKIVIVENEGQLQKILPVKNSLPHLTHIVHIDNITSSPTDRLCSLDDVMNSD 157
Query: 324 RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
D L ++ + + VYTSGT G K +L+H N A + +
Sbjct: 158 LTEVQFVYDEALASLNLDHDASFVYTSGTTGEPKGAILTHGNFVAEAKGALAICPI-GED 216
Query: 384 LSVISFLPLSHIAAQTVDIYSV 405
+ + FLPL+HI + + +
Sbjct: 217 FTGLLFLPLAHILGRVTQFFHI 238
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
K+ + + I++ N +++ + I+KF LP DFSI +GEL PT+K+KR + +KY S++
Sbjct: 531 KLQEFIKNRIEQKN-SDLASYETIKKFAILPNDFSIESGELTPTLKLKRKVIYQKYTSVL 589
Query: 481 DKFY 484
D FY
Sbjct: 590 DGFY 593
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L L+ K+ MG R R +SG AP+S +L +F + I E +G++E +
Sbjct: 322 YFLAHHLVFKKLHDKMG-GRIRFFISGGAPLSADLALFFHAFGFTILEGYGLTETTAGLS 380
Query: 169 VSAPDDFKLDGVGRTIP-GTQTKIVDPDEEGNGEICLK 205
+ K VG+ I KI G+GEIC++
Sbjct: 381 FNRSHFIKFGTVGQPIEDAVAVKIA-----GDGEICVR 413
>gi|427821944|ref|ZP_18989006.1| putative long-chain fatty-acid--CoA ligase [Bordetella
bronchiseptica Bbr77]
gi|410587209|emb|CCN02242.1| putative long-chain fatty-acid--CoA ligase [Bordetella
bronchiseptica Bbr77]
Length = 621
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA GLE V II N EW + +GA G G+Y T+ + L ++
Sbjct: 63 VALGLRAAGLEPGGKVAIIAENRLEWLLAQMGAGVLGAIPVGVYCTSPAAEVGYVLEHAE 122
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDELMELGR-- 324
++ V ED +Q +K+L+V A+ P L+ IV E K ++ + S+ EL G
Sbjct: 123 VDMVVCEDQEQTDKVLEVAARLPGLRRIVVMETKGLRNHAEAERARMTSFAELEARGAQC 182
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
AA L++ L+ ++ ++YTSG+ G K M+S+ N+ A I +++ +
Sbjct: 183 GAAEQARLEQALDAQTLDDVGLMIYTSGSTGKPKGAMISYRNMRGVAPGIADRLDMDAGS 242
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL H+A Q + + + + + + F +
Sbjct: 243 VH-LSYLPLCHVAEQMLSTFVPVYLGSQVNFGE 274
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 25/174 (14%)
Query: 67 WKK----VTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVR-W---LI 116
W+K ++ K+Q +G ++RW+ YA++ L+ +LE + + + RLV W LI
Sbjct: 298 WEKLHAAISIKMQESGRLRRWL--YARA--LRGCAPFLELSRARYGWRERLVYGWHYALI 353
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L + +GL R +V+++GAAPI E+ RYF +L IP+ EV+G++E G PD +
Sbjct: 354 LRALHNFVGLRRVKVAMTGAAPIPPEVLRYFRTLGIPLIEVYGLTESTGMIFGQHPDRVR 413
Query: 177 LDGVGRTIPGTQTKIVDPDEEG----NGEICLKEY----EANVRTVAKAFLKLG 222
+ VG G Q ++ E+G GE+ Y +A+ TV +L G
Sbjct: 414 VGTVGEPTLGVQARV---GEQGELLVRGEMVFHGYYRNPQASADTVRDGWLHTG 464
>gi|410420590|ref|YP_006901039.1| long-chain fatty-acid--CoA ligase [Bordetella bronchiseptica MO149]
gi|408447885|emb|CCJ59562.1| putative long-chain fatty-acid--CoA ligase [Bordetella
bronchiseptica MO149]
Length = 621
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA GLE V II N EW + +GA G G+Y T+ + L ++
Sbjct: 63 VALGLRAAGLEPGGKVAIIAENRLEWLLAQMGAGVLGAIPVGVYCTSPAAEVGYVLEHAE 122
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDELMELGR-- 324
++ V ED +Q +K+L+V A+ P L+ IV E K ++ + S+ EL G
Sbjct: 123 VDMVVCEDQEQTDKVLEVAARLPGLRRIVVMETKGLRNHAEAERARMTSFAELEARGAQC 182
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
AA L++ L+ ++ ++YTSG+ G K M+S+ N+ A I +++ +
Sbjct: 183 GAAEQARLEQALDAQTLDDVGLMIYTSGSTGKPKGAMISYRNMRGVAPGIADRLDMDAGS 242
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL H+A Q + + + + + + F +
Sbjct: 243 VH-LSYLPLCHVAEQMLSTFVPVYLGSQVNFGE 274
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 25/174 (14%)
Query: 67 WKK----VTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVR-W---LI 116
W+K ++ K+Q +G ++RW+ YA++ L+ +LE + + + RLV W LI
Sbjct: 298 WEKLHAAISIKMQESGRLRRWL--YARA--LRGCAPFLELSRARYGWRERLVYGWHYALI 353
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L + +GL R +V+++GAAPI E+ RYF +L IP+ EV+G++E G PD +
Sbjct: 354 LRALHNFVGLRRVKVAMTGAAPIPPEVLRYFRTLGIPLIEVYGLTESTGMIFGQHPDRVR 413
Query: 177 LDGVGRTIPGTQTKIVDPDEEG----NGEICLKEY----EANVRTVAKAFLKLG 222
+ VG G Q ++ E+G GE+ Y +A+ TV +L G
Sbjct: 414 VGTVGEPTLGVQARV---GEQGELLVRGEMVFHGYYRNPQASADTVRDGWLHTG 464
>gi|374850349|dbj|BAL53340.1| long-chain acyl-CoA synthetase [uncultured Bacteroidetes bacterium]
Length = 611
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 13/227 (5%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I A+V A A +LGLE V ++ N EW +D + AGG M+ +
Sbjct: 34 IGYDRLRADVVAYALALEELGLEAGDRVGLLSENRYEWVITDFAVLLAGGVDVPMFPSLV 93
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPG----VI 314
+ L S + C V Q K+L + + L+ ++ ++ G PD+ G V
Sbjct: 94 EPQIAYILNHSQSVFCAVSSSYQFRKLLNIADRLETLEGVIVFDDVPGLPDRLGERIRVY 153
Query: 315 SWDELMELGRAAPDE-----SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
+++ G ++ R+LE ++ CT++YTSGT G K VML+H NI N
Sbjct: 154 RLSDMLARGSEMQRTVDVHGTIRRLLERTRGDDLCTIIYTSGTTGTPKGVMLTHRNILSN 213
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
++ + +S+LP+ H +T Y+ T FA+
Sbjct: 214 VEAARSVIAVDERDV-FLSYLPMCHSYERTTGFYTAFASGGTTAFAE 259
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 75 QTTGVKRWIANYAKSTSLQHYMAYLEK---NVSEPYTYRLVRWLILSKVKQAMGLDRCRV 131
Q + ++R I +A + L+ E+ + + + YRL + K++ A+G R R
Sbjct: 296 QQSPLRRSIFEWAVTIGLRRLREQEEQGRISAATAFGYRLAERFVFRKIQLAVG-GRLRF 354
Query: 132 SLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKI 191
+SG P++ E+ R+F ++ +PI E +G++E + TV+ DD + VG+ +PG + +I
Sbjct: 355 FVSGGGPLAPEIGRFFWAIGLPILEGYGLTEASPVLTVNRLDDNEFGTVGKPLPGVEIRI 414
Query: 192 VDPDE 196
D E
Sbjct: 415 DDSGE 419
>gi|375264373|ref|YP_005021816.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
gi|369839697|gb|AEX20841.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
Length = 599
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ V ++ A L GL V I N P+W +D A+ +Y TN+
Sbjct: 36 ITWQQFGQQVDELSLALLAQGLRVQDKVGIFSNNMPQWTIADFAALQVRSVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDE 318
+ L +D + V + Q + + + QC +L+ IV D P V SW +
Sbjct: 96 AAQSAYILDNADVKVLFVGEQPQFDAAVSIFEQCSQLELIVAMSDDIELGDHPFVASWKD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ G ++ E LD + ++ TL+YTSGT G K VML + NI +
Sbjct: 156 FIAKGNSSYQEELDARVAQACEDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDKRLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LTQDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLKD 252
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMY 595
>gi|365876500|ref|ZP_09416021.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442586511|ref|ZP_21005339.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
gi|365755812|gb|EHM97730.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442563735|gb|ELR80942.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
Length = 588
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 9/216 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+Y +++ +KLG++ + +I N EW D+G G + +Y T S E
Sbjct: 38 QYITQANKISRGLIKLGIKPGDKIGLISHNNRTEWAIMDIGMSQIGVISVPVYPTISEED 97
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ ++ C V D + K++ V+ + L + ++ D G +W E+++LG
Sbjct: 98 YEYIFNNAEIKYCFVSDKELYNKLISVQPKVSSLMGVFAFD---DVKGAPNWKEILDLGE 154
Query: 325 AAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI---TFNAACIIQYFKLE 380
+S ++ + I T++ TL+YTSGT G K V L+H+NI N+ I KL+
Sbjct: 155 DDSTQSEIEDIANIIKTDDIATLIYTSGTTGRPKGVALTHENIVSNVLNSNPRIPDVKLD 214
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLPL H+ + + +Y +++FA+
Sbjct: 215 YKEMKCLSFLPLCHVFERML-LYLYQHNGYSIYFAE 249
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK ++ +G + + +SG+A +S L R F IPI E +G++E + V++
Sbjct: 321 LVFSKWREGLGGNIVAL-VSGSAALSPRLNRIFHGAGIPILEGYGLTETSPVIAVNSFKH 379
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K VG I + KI + E G K Y + +AF + G Y IG
Sbjct: 380 RKFGTVGWPIENAEVKIAEDGEILVKGTSVFKGYYMDEEKTKEAFTEDG---YFKTGDIG 436
Query: 234 FNAPEWF 240
F E F
Sbjct: 437 FIDDEGF 443
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K + ++I+KFE P +SI G L PT+K+KR + +K+ + +K Y+
Sbjct: 538 KHLGKWEQIKKFELTPIVWSIDEGLLTPTLKLKRKIIKEKFIDLYNKIYE 587
>gi|294786875|ref|ZP_06752129.1| putative long-chain-fatty-acid--CoA ligase [Parascardovia
denticolens F0305]
gi|294485708|gb|EFG33342.1| putative long-chain-fatty-acid--CoA ligase [Parascardovia
denticolens F0305]
Length = 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 209 ANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHC 268
A++R+ AK F+ GL++ V + + EW D + GG + +Y T+S
Sbjct: 130 ADIRSTAKGFIHQGLKKGDCVAFMCRTSYEWDVIDGAVLAIGGVLSTIYETDSAAQIRTI 189
Query: 269 LVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPD 328
+ SDA VV+ LE+ CP L+ I E + E+ GRA D
Sbjct: 190 VKNSDAKTLVVQSRDMLERAEGAIEDCPSLEKIYCLENG-------ALQEIQAYGRAISD 242
Query: 329 ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESAALSV 386
E LD ++ + ++ T+VYTSG+ A K V L+H N+ A I Y L S+
Sbjct: 243 EELDERVDAVTLDDLATIVYTSGSTSAPKGVELTHRNLVAFALNINAYIPNLLADPTGSI 302
Query: 387 ISFLPLSHIAAQTVD---IYSVMTV 408
+ FLP +H A+ ++ +YS + V
Sbjct: 303 LMFLPQAHNFARAINYGVVYSSIQV 327
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 393 SHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPA 452
S + AQ +D +T AA +NA V Q +D AN + +S A+ ++KF LP
Sbjct: 592 SWLEAQGLDKNMPLTEAA------ENA-AVRGEVQKYVDLAN-EGVSRAESVRKFIILPE 643
Query: 453 DFSIPTGELGPTMKVKRPFVVKKYQSIID 481
DFS G L +MKV RP V+K YQ ++D
Sbjct: 644 DFSQENGLLTASMKVIRPRVIKHYQRLLD 672
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 108/273 (39%), Gaps = 60/273 (21%)
Query: 78 GVK-RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVS 132
GVK R A+ AK+ + YM + + S P R + L+ S +K+A+G R +
Sbjct: 369 GVKGRIFASAAKTA--RSYMNAVAETGSAPLAERALHTAYGPLVYSALKEALG-GRPKWL 425
Query: 133 LSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSA-PDDFKLDGVGRTIPGTQTKI 191
+ G AP+ +L +F IP+ E +GM+E + T + F+ VG PG +I
Sbjct: 426 VCGGAPLDPQLLSFFRGAGIPVYEGYGMTETSAPCTFNPLGTPFRPGSVGIVFPGFSLRI 485
Query: 192 VDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYA 249
+ E + G ++Y N + F + G W S DLG
Sbjct: 486 SEEGEIQMKGAGIFRQYHKNDEATKETFTEDG----------------WVASGDLGTFTN 529
Query: 250 GGF-------------AAGMYTTNSP--EACLHCLVTSDANICVVEDDKQLEKILKVKAQ 294
GF A G + +P EA C + S A VV DK+
Sbjct: 530 DGFLYITGRKKDLIITAGGKNVSPTPIEEAIRRCGLVSQA---VVLGDKR---------- 576
Query: 295 CPKLKAIVQYEGKPDKPGVISWDELMELGRAAP 327
P + A+V D+ G+ SW E L + P
Sbjct: 577 -PFISALVTL----DEEGLRSWLEAQGLDKNMP 604
>gi|420237108|ref|ZP_14741579.1| AMP-binding enzyme [Parascardovia denticolens IPLA 20019]
gi|391879379|gb|EIT87885.1| AMP-binding enzyme [Parascardovia denticolens IPLA 20019]
Length = 683
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 209 ANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHC 268
A++R+ AK F+ GL++ V + + EW D + GG + +Y T+S
Sbjct: 130 ADIRSTAKGFIHQGLKKGDCVAFMCRTSYEWDVIDGAVLAIGGVLSTIYETDSAAQIRTI 189
Query: 269 LVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPD 328
+ SDA VV+ LE+ CP L+ I E + E+ GRA D
Sbjct: 190 VKNSDAKTLVVQSRDMLERAEGAIEDCPSLEKIYCLENG-------ALQEIQAYGRAISD 242
Query: 329 ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESAALSV 386
E LD ++ + ++ T+VYTSG+ A K V L+H N+ A I Y L S+
Sbjct: 243 EELDERVDAVTLDDLATIVYTSGSTSAPKGVELTHRNLVAFALNINAYIPNLLADPTGSI 302
Query: 387 ISFLPLSHIAAQTVD---IYSVMTV 408
+ FLP +H A+ ++ +YS + V
Sbjct: 303 LMFLPQAHNFARAINYGVVYSSIQV 327
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 108/273 (39%), Gaps = 60/273 (21%)
Query: 78 GVK-RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVS 132
GVK R A+ AK+ + YM + + S P R + L+ S +K+A+G R +
Sbjct: 369 GVKGRIFASAAKTA--RSYMNAVAETGSAPLAERALHTAYGPLVYSALKEALG-GRPKWL 425
Query: 133 LSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSA-PDDFKLDGVGRTIPGTQTKI 191
+ G AP+ +L +F IP+ E +GM+E + T + F+ VG PG +I
Sbjct: 426 VCGGAPLDPQLLSFFRGAGIPVYEGYGMTETSAPCTFNPLGTPFRPGSVGIVFPGFSLRI 485
Query: 192 VDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYA 249
+ E + G ++Y N + F K G W S DLG
Sbjct: 486 SEEGEIQMKGAGIFRQYHKNDEATKETFTKDG----------------WVASGDLGTFTN 529
Query: 250 GGF-------------AAGMYTTNSP--EACLHCLVTSDANICVVEDDKQLEKILKVKAQ 294
GF A G + +P EA C + S A VV DK+
Sbjct: 530 DGFLYITGRKKDLIITAGGKNVSPTPIEEAIRRCGLVSQA---VVLGDKR---------- 576
Query: 295 CPKLKAIVQYEGKPDKPGVISWDELMELGRAAP 327
P + A+V D+ G+ SW E L + P
Sbjct: 577 -PFISALVTL----DEEGLRSWLEAQGLDKNMP 604
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 393 SHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPA 452
S + AQ +D +T AA +NA V Q +D AN + +S A+ ++KF LP
Sbjct: 592 SWLEAQGLDKNMPLTEAA------ENA-AVRGEVQKYVDLAN-EGVSRAESVRKFIILPE 643
Query: 453 DFSIPTGELGPTMKVKRPFVVKKYQSIID 481
DFS G L +MKV RP V+K YQ ++D
Sbjct: 644 DFSQENGLLTASMKVIRPRVIKHYQRLLD 672
>gi|261868773|ref|YP_003256695.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|415770029|ref|ZP_11484644.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans D17P-2]
gi|416108714|ref|ZP_11591209.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|444346026|ref|ZP_21154008.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|261414105|gb|ACX83476.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|348004239|gb|EGY44764.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|348657062|gb|EGY74659.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans D17P-2]
gi|443542144|gb|ELT52511.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
Length = 595
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I D +Q ++++ + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFAGDQEQYDQVIDIADECPKLIKIVAMKSTINLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDGKSLADLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QIDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 79 VKRWIANYAKSTSLQHYMAYL-EKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + + + ++ + P Y L L+L K++ +G R R+ G
Sbjct: 291 LRQWIFNWAIAVGRKRFDTLAKQQKIGFPLKQQYALADKLVLGKLRALLG-GRIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFSFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE-EGNGEICLKEYEANVRTVAKAF 218
+E G + +K Y + A F
Sbjct: 408 NNEILVRGGMVMKGYYKKPQETADTF 433
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++I++F LP FS E+ PT+K++R ++++Y+ +I+ Y+
Sbjct: 546 KELAGWEQIKRFTLLPQAFSTQLEEITPTLKLRRKVILQRYKELIEAMYN 595
>gi|226360263|ref|YP_002778041.1| long-chain fatty-acid--CoA ligase FadD15 [Rhodococcus opacus B4]
gi|226238748|dbj|BAH49096.1| long-chain fatty-acid--CoA ligase FadD15 [Rhodococcus opacus B4]
Length = 603
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V VAK + +G+++ V ++ EW D AGG +Y T+
Sbjct: 45 DVTAAEFAAQVTAVAKGLIAIGVQQGDRVALMSATRYEWPLVDFAIWAAGGVTVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A VVE+ + V A+ L+ + + E GV+ +EL
Sbjct: 105 SAEQVRWILEDSAAIDLVVENAAHAATVKAVAAEATALRGVYRIEASESGRGVV--EELT 162
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY---F 377
E G P+ + + + ++ TL+YTSGT G K L+H N+ + I+
Sbjct: 163 ERGADVPESEVRARVAALQASDPATLIYTSGTTGRPKGCQLTHANLIAESKGILDSSLGT 222
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYS 404
L++ +S + FLP++H+ A+ V I S
Sbjct: 223 LLKTPGVSTLMFLPMAHVLARAVSIAS 249
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G RC++++SG AP+ L +F + I I E +G++E + A V+ +
Sbjct: 337 LVFSKLRAALG-GRCQLAISGGAPLGARLGHFFRGIGITIYEGYGLTETSAAFAVNTIGE 395
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ + G +I D E +G + Y N A A
Sbjct: 396 QKVGSVGKPLAGNSVRIADDGEILLSGPVVFGGYWRNENATADAIQN------------- 442
Query: 234 FNAPEWFYS-DLGAIYAGGF 252
WF++ DLG++ A G+
Sbjct: 443 ----GWFHTGDLGSVDADGY 458
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN K +S+A+ I+KF LP DF+ TGEL PTMK+KR V + I Y
Sbjct: 547 AVAEAN-KLVSHAEAIKKFRVLPVDFTEETGELTPTMKLKRNVVHDSFADDIAALY 601
>gi|453075403|ref|ZP_21978190.1| acyl-CoA ligase [Rhodococcus triatomae BKS 15-14]
gi|452763125|gb|EME21408.1| acyl-CoA ligase [Rhodococcus triatomae BKS 15-14]
Length = 595
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ A V VAK + G+E V I+ EW D AGG +Y T+
Sbjct: 45 DVTAGEFAAQVAGVAKGLMASGIELGDRVAILSATRYEWVVLDYAIWAAGGCTVAIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S + L S + VVE K E + V P L+ ++Q E G I DEL
Sbjct: 105 SADQAQWILEDSATALLVVETAKHAETVKDVAEAAPALREMLQIEA-----GAI--DELT 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
G DE+L + + TL+YTSGT G K V L+H N FNA C L
Sbjct: 158 SRGATITDEALHERRAQVNASSPATLIYTSGTTGRPKGVQLTHSN--FNAECQAVQLALS 215
Query: 381 SA---ALSVISFLPLSHIAAQTV 400
+ + FLPL+H+ A+ V
Sbjct: 216 DSMYEGQRTLLFLPLAHVFARAV 238
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 428 AAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AA+ N K +SN ++I+K+ L DFSI TGEL PT+K+KR + + + + I+ Y
Sbjct: 539 AAVAEGN-KKVSNPEQIKKYRILDVDFSIETGELTPTLKLKRNVIHESFGTAIEAIY 594
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ A+G C ++SG A + + L +F + +P+ E +G++E + A TV+
Sbjct: 330 LVYGKLRAALG-GECDRAVSGGAALGSRLGHFFRGIGVPVFEGYGLTETSAAITVNTTSA 388
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG+ + G +I D +GE+ +K
Sbjct: 389 QKVGTVGKPVSGHAVRIAD-----DGELLVK 414
>gi|412337456|ref|YP_006966211.1| long-chain fatty-acid--CoA ligase [Bordetella bronchiseptica 253]
gi|408767290|emb|CCJ52036.1| putative long-chain fatty-acid--CoA ligase [Bordetella
bronchiseptica 253]
Length = 621
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA GLE V II N EW + +GA G G+Y T+ + L ++
Sbjct: 63 VALGLRAAGLEPGGKVAIIAENRLEWLLAQMGAGVLGAIPVGVYCTSPAAEVGYVLEHAE 122
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDELMELGR-- 324
++ V ED +Q +K+L+V A+ P L+ IV E K ++ + S+ EL G
Sbjct: 123 VDMVVCEDQEQTDKVLEVAARLPGLRRIVVMETKGLRNHAEAERARMTSFAELEARGAQC 182
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
AA L++ L+ ++ ++YTSG+ G K M+S+ N+ A I +++ +
Sbjct: 183 GAAEQARLEQALDAQTLDDVGLMIYTSGSTGKPKGAMISYRNMRGVAPGIADRLDMDAGS 242
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL H+A Q + + + + + + F +
Sbjct: 243 VH-LSYLPLCHVAEQMLSTFVPVYLGSQVNFGE 274
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 25/174 (14%)
Query: 67 WKK----VTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVR-W---LI 116
W+K ++ K+Q +G ++RW+ YA++ L+ +LE + + + RLV W LI
Sbjct: 298 WEKLHAAISIKMQESGRLRRWL--YARA--LRGCAPFLELSRARYGWRERLVYGWHYALI 353
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L + +GL R +V+++GAAPI E+ RYF +L IP+ EV+G++E G PD +
Sbjct: 354 LRALHNFVGLRRVKVAMTGAAPIPPEVLRYFRTLGIPLIEVYGLTESTGMIFGQHPDRVR 413
Query: 177 LDGVGRTIPGTQTKIVDPDEEG----NGEICLKEY----EANVRTVAKAFLKLG 222
+ VG G Q ++ E+G GE+ Y +A+ TV +L G
Sbjct: 414 VGTVGEPTLGVQARV---GEQGELLVRGEMVFHGYYRNPQASADTVRDGWLHTG 464
>gi|429732598|ref|ZP_19267201.1| AMP-binding enzyme [Aggregatibacter actinomycetemcomitans Y4]
gi|429155721|gb|EKX98378.1| AMP-binding enzyme [Aggregatibacter actinomycetemcomitans Y4]
Length = 595
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I D +Q ++++ + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFAGDQEQYDQVIDIADECPKLIKIVAMKSTINLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDGKSLADLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QIDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++I++F LP FS E+ PT+K++R ++++Y+ +I+ Y+
Sbjct: 546 KELAGWEQIKRFTLLPQAFSTQLEEITPTLKLRRKVILQRYKELIEAMYN 595
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 79 VKRWIANYAKSTSLQHYMAYL-EKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + + + ++ + P Y L L+L K++ +G R+ G
Sbjct: 291 LRQWIFNWAIAVGRKRFDTLAKQQKIGFPLKQQYALADKLVLGKLRALLG-GHIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFSFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE 196
+E
Sbjct: 408 NNE 410
>gi|158318552|ref|YP_001511060.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec]
gi|158113957|gb|ABW16154.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec]
Length = 653
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y A V +A A +LG R ++ PE+ D + GG +Y ++ E
Sbjct: 61 RQYGAQVARMAGALERLGFGRGDRALLMTCPRPEFHVIDSAVLLLGGCPISIYNSSPAER 120
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD--------------- 309
+ A++ VVE + L ++L V+A+ P L+ +V + P
Sbjct: 121 VRYLAAHCRASLVVVEGRELLARVLAVRAELPDLRHVVVIDPAPTGSGGTGSEAAGGENL 180
Query: 310 --------KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
PGV+ WD+L+ AA L+ T ++ CT++YTSGT G K VML
Sbjct: 181 GGGAAGDVPPGVLRWDDLL----AADPVDLEARAATAGPDDPCTVIYTSGTTGVPKGVML 236
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIA----AQTVDIYS 404
H + + ++ + +S+LP++HIA AQ +Y+
Sbjct: 237 DHRAVIWQCESYLRRLDRDLTGARWVSYLPVAHIATRFYAQYFHVYA 283
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
+++ +GL GAAP + +L ++ L +P+ E +G+SE G TV P ++L
Sbjct: 375 ELRTRLGLGNLLTGAIGAAPANPQLTAAWIGLGVPMFEGYGLSESTGMLTVD-PFAYRLG 433
Query: 179 GVGRTIPGTQTKIVDPDEE 197
VGR +PG + ++ PD E
Sbjct: 434 SVGRPMPGVELRVA-PDGE 451
>gi|416061772|ref|ZP_11581263.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
gi|347997508|gb|EGY38498.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
Length = 595
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I D +Q ++++ + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFAGDQEQYDQVIDIADECPKLIKIVAMKSTINLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDGKSLADLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QIDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++I++F LP FS E+ PT+K++R ++++Y+ +I+ Y+
Sbjct: 546 KELAGWEQIKRFTLLPQAFSTQLEEITPTLKLRRKVILQRYKELIEAMYN 595
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 79 VKRWIANYAKSTSLQHYMAYL-EKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + + + ++ + P Y L L+L K++ +G R+ G
Sbjct: 291 LRQWIFNWAIAVGRKRFDTLAKQQKIGFPLKQQYALADKLVLGKLRALLG-GHIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFSFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE-EGNGEICLKEYEANVRTVAKAF 218
+E G + +K Y + A F
Sbjct: 408 NNEILVRGGMVMKGYYKKPQETADTF 433
>gi|407452392|ref|YP_006724117.1| hypothetical protein B739_1625 [Riemerella anatipestifer RA-CH-1]
gi|403313376|gb|AFR36217.1| hypothetical protein B739_1625 [Riemerella anatipestifer RA-CH-1]
Length = 593
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNA-PEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTS 272
+++ LKLG++ + +I N EW DLG +Y T S E ++ +
Sbjct: 46 ISRGLLKLGIKPEDKISLISTNNRTEWAVMDLGISQIRAVTVPVYPTISVEDYVYIFNNA 105
Query: 273 DANICVVEDDKQLEKILKVKAQCPKLKAIVQY---EGKPDKPGVISWDELMELGRAAPDE 329
+ C V D + +K+L V+ P L I + EG P+ W E+++LG +
Sbjct: 106 EIKYCFVSDGELYQKLLAVQPSVPSLVGIFTFDKVEGAPN------WSEILDLGEDETTQ 159
Query: 330 -SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC---IIQYFKLESAALS 385
++ + + I T++ +++YTSGT G K VML+H NI N I+ K + L
Sbjct: 160 IEVEDLKKGIKTDDLASIIYTSGTTGRPKGVMLTHQNIVSNVLTCTPILSEKKPQDTNLK 219
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+SFLP+ HI + + Y + +++FA+
Sbjct: 220 SLSFLPICHIFERML-FYFYINSGISIYFAE 249
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K ++ +G + + +SG+A ++ L R F + I I E +G++E + V+ +
Sbjct: 322 LVFKKWREGLGGNIITL-ISGSAALAPRLNRMFQNAGISILEGYGLTETSPVIAVNTFNK 380
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG +P KI +G+GEI +K
Sbjct: 381 MKVGTVGPVLPNLDVKI-----QGDGEISVK 406
>gi|315226511|ref|ZP_07868299.1| long-chain acyl-CoA synthetase (AMP-forming) [Parascardovia
denticolens DSM 10105 = JCM 12538]
gi|315120643|gb|EFT83775.1| long-chain acyl-CoA synthetase (AMP-forming) [Parascardovia
denticolens DSM 10105 = JCM 12538]
Length = 745
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 209 ANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHC 268
A++R+ AK F+ GL++ V + + EW D + GG + +Y T+S
Sbjct: 192 ADIRSTAKGFIHQGLKKGDCVAFMCRTSYEWDVIDGAVLAIGGVLSTIYETDSAAQIRTI 251
Query: 269 LVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPD 328
+ SDA VV+ LE+ CP L+ I E + E+ GRA D
Sbjct: 252 VKNSDAKTLVVQSRDMLERAEGAIEDCPSLEKIYCLENG-------ALQEIQAYGRAISD 304
Query: 329 ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESAALSV 386
E LD ++ + ++ T+VYTSG+ A K V L+H N+ A I Y L S+
Sbjct: 305 EELDERVDAVTLDDLATIVYTSGSTSAPKGVELTHRNLVAFALNINAYIPNLLADPTGSI 364
Query: 387 ISFLPLSHIAAQTVD---IYSVMTV 408
+ FLP +H A+ ++ +YS + V
Sbjct: 365 LMFLPQAHNFARAINYGVVYSSIQV 389
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 393 SHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPA 452
S + AQ +D +T AA +NA V Q +D AN + +S A+ ++KF LP
Sbjct: 654 SWLEAQGLDKNMPLTEAA------ENA-AVRGEVQKYVDLAN-EGVSRAESVRKFIILPE 705
Query: 453 DFSIPTGELGPTMKVKRPFVVKKYQSIID 481
DFS G L +MKV RP V+K YQ ++D
Sbjct: 706 DFSQENGLLTASMKVIRPRVIKHYQRLLD 734
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 108/273 (39%), Gaps = 60/273 (21%)
Query: 78 GVK-RWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRW----LILSKVKQAMGLDRCRVS 132
GVK R A+ AK+ + YM + + S P R + L+ S +K+A+G R +
Sbjct: 431 GVKGRIFASAAKTA--RSYMNAVAETGSAPLAERALHTAYGPLVYSALKEALG-GRPKWL 487
Query: 133 LSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSA-PDDFKLDGVGRTIPGTQTKI 191
+ G AP+ +L +F IP+ E +GM+E + T + F+ VG PG +I
Sbjct: 488 VCGGAPLDPQLLSFFRGAGIPVYEGYGMTETSAPCTFNPLGTPFRPGSVGIVFPGFSLRI 547
Query: 192 VDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS-DLGAIYA 249
+ E + G ++Y N + F + G W S DLG
Sbjct: 548 SEEGEIQMKGAGIFRQYHKNDEATKETFTEDG----------------WVASGDLGTFTN 591
Query: 250 GGF-------------AAGMYTTNSP--EACLHCLVTSDANICVVEDDKQLEKILKVKAQ 294
GF A G + +P EA C + S A VV DK+
Sbjct: 592 DGFLYITGRKKDLIITAGGKNVSPTPIEEAIRRCGLVSQA---VVLGDKR---------- 638
Query: 295 CPKLKAIVQYEGKPDKPGVISWDELMELGRAAP 327
P + A+V D+ G+ SW E L + P
Sbjct: 639 -PFISALVTL----DEEGLRSWLEAQGLDKNMP 666
>gi|254382707|ref|ZP_04998064.1| long-chain fatty-acid CoA ligase [Streptomyces sp. Mg1]
gi|194341609|gb|EDX22575.1| long-chain fatty-acid CoA ligase [Streptomyces sp. Mg1]
Length = 629
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
V +A + LGL V + EW +DLG + AGG +Y + + E + L
Sbjct: 58 RVFAIAAGLVDLGLASEQRVALASGTRVEWILADLGVMCAGGAVTTIYPSTNAEESAYIL 117
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIV--------QYEGKPDKPGVISWDELME 321
SD+++ + ED QL K + +A P L +V EG P+ V+S +L
Sbjct: 118 ADSDSHVLIAEDASQLAKARERRADLPALSHVVVMESADAIAAEGDPEG-WVLSLADLEA 176
Query: 322 LGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
GR A E++ + I ++ TL+YTSGT G K V L HDN ++ A +
Sbjct: 177 RGREYLAKNPEAVKERIGAITADQLATLIYTSGTTGRPKGVRLPHDNWSYMAKATVATGM 236
Query: 379 LESAALSVISFLPLSHI 395
+ S + + +LPL+H+
Sbjct: 237 ITSEDVQYL-WLPLAHV 252
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 16/134 (11%)
Query: 76 TTGVKRWIANYAKSTSLQHYMAYLEKNVSEPY----TYRLVRWLILSKVKQAMGLDRCRV 131
+ GV R YAK T + N + P+ +++ L+ SK+++A G R R
Sbjct: 321 SVGVAR---EYAKVTQDNYRRT---GNATAPFGLTTKHKIADALVYSKLREAFG-GRLRA 373
Query: 132 SLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKI 191
++SGA+ ++ E+ +F I I E +G++E + A V+ + ++ VG+ +PGT+ +I
Sbjct: 374 AVSGASALAPEIGYFFSGAGINILEGYGLTESSAASFVNPGEAYRTGTVGKPLPGTEVRI 433
Query: 192 VDPDEEGNGEICLK 205
D +GEI L+
Sbjct: 434 AD-----DGEILLR 442
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 442 QKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +++F LP D + G+L P++K+KRP V ++++ +I++ Y
Sbjct: 581 QTVKQFRLLPRDLDVEHGDLTPSLKLKRPVVEREFKHLIEEMY 623
>gi|336253150|ref|YP_004596257.1| Long-chain-fatty-acid--CoA ligase [Halopiger xanaduensis SH-6]
gi|335337139|gb|AEH36378.1| Long-chain-fatty-acid--CoA ligase [Halopiger xanaduensis SH-6]
Length = 666
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 133/307 (43%), Gaps = 37/307 (12%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I E VR +A F LG+ER + I EW D + AG +YT +S
Sbjct: 64 ISYAEMRDIVRRLAAGFRDLGVERGDRIGIFANTRMEWAQCDFALLGAGAVVTTVYTGSS 123
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGK--PDKPGVISW 316
E + L DAN VVE+ + LE++L V+ L+ IV EG ++ V +
Sbjct: 124 EEKVEYLLDDPDANGVVVENRELLERVLAVEDSL-DLEFIVSIDDLEGHDAAERDDVFTL 182
Query: 317 DELMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
+L E G A D E+ ++ A ++ +L+YTSGT G K V L+H N N + +
Sbjct: 183 ADLYERGDEAFDLETYQTWVDAPAMDDLASLIYTSGTTGKPKGVRLTHRNFRSNVNQVHR 242
Query: 376 YF-----------KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK------- 417
F L+ + +V S+LPL+H+ +T + + A++ +A+
Sbjct: 243 RFAPRPDRDDDVPTLDETSRAV-SYLPLAHVFERTAGHFVLFATGASVAYAESPDTLQED 301
Query: 418 -------NALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSI---PTGELGPTMKV 467
A V + + DR ++ + K + FE+ D + T E GP ++
Sbjct: 302 FSLVEPTTATSVPRVYEKIYDRIREQASESPAKKRIFEWA-TDVGVAYQETDEPGPLLRA 360
Query: 468 KRPFVVK 474
KR K
Sbjct: 361 KRTLADK 367
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q +DR N + + ++I++FE +P +F+ L PTMK KR ++ ++ +
Sbjct: 601 RVREYIQREVDRVN-EGLDGYERIKRFELVPQEFTEENELLTPTMKKKRRAILDRFADRV 659
Query: 481 DKFYD 485
D+ Y+
Sbjct: 660 DRIYE 664
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + + +SG +S EL + + ++ +PI E +G++E + +V+ P +
Sbjct: 368 LVFSTVREALGGN-IELLISGGGSLSPELCQLYHAMGLPIHEGYGLTETSPVISVNPPGE 426
Query: 175 FKLDGVG 181
K+ +G
Sbjct: 427 VKIGTIG 433
>gi|387120504|ref|YP_006286387.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|415758301|ref|ZP_11481531.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans D17P-3]
gi|416044163|ref|ZP_11574939.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|347996467|gb|EGY37542.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|348655290|gb|EGY70759.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans D17P-3]
gi|385874996|gb|AFI86555.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 595
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I D +Q ++++ + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFAGDQEQYDQVIDIADECPKLIKIVAMKSTINLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDGKSLADLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QIDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++I++F LP FS E+ PT+K++R ++++Y+ +I+ Y+
Sbjct: 546 KELAGWEQIKRFTLLPQAFSTQLEEITPTLKLRRKVILQRYKELIEAMYN 595
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 79 VKRWIANYAKSTSLQHYMAYL-EKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + + + ++ + P Y L L+L K++ +G R+ G
Sbjct: 291 LRQWIFNWAIAVGRKRFDTLAKQQKIGFPLKQQYALADKLVLGKLRALLG-GHIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFSFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE-EGNGEICLKEYEANVRTVAKAF 218
+E G + +K Y + A F
Sbjct: 408 NNEILVRGGMVMKGYYKKPQETADTF 433
>gi|147669473|ref|YP_001214291.1| AMP-dependent synthetase and ligase [Dehalococcoides sp. BAV1]
gi|452205143|ref|YP_007485272.1| long-chain-fatty-acid--CoA ligase [Dehalococcoides mccartyi BTF08]
gi|146270421|gb|ABQ17413.1| AMP-dependent synthetase and ligase [Dehalococcoides sp. BAV1]
gi|452112199|gb|AGG07930.1| long-chain-fatty-acid--CoA ligase [Dehalococcoides mccartyi BTF08]
Length = 630
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y V+ L LG + V IIG N PEWF+++ A G G+Y + P+
Sbjct: 39 DYYQTVKYFGLGLLSLGTKPSDRVAIIGDNEPEWFWAEFAAQSIGAIPTGIYVDSIPDEV 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELME 321
+ ++ + VV D +Q +K L++ + P L I+ ++ K D P ++S+ E+++
Sbjct: 99 KYIASHAEVRVAVVNDQEQADKFLELLPELPNLIKIIYWDPKGLKNYDDPMLVSFKEVIK 158
Query: 322 LGRAAPDESLD---RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LGR +LD R+L+T ++ + YTSGT G K MLSH ++ A + +
Sbjct: 159 LGREYEKANLDLFERLLDTTKPDDIAFIYYTSGTTGLQKGAMLSHRSLITTAKGFVARYP 218
Query: 379 LESAALSVISFLPLSHIA 396
L S +IS P S +
Sbjct: 219 L-SYKDDLISNFPASWVG 235
>gi|416069676|ref|ZP_11583352.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|347999785|gb|EGY40600.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
Length = 595
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I D +Q ++++ + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFAGDQEQYDQVIDIADECPKLIKIVAMKSTINLHEHTKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDGKSLADLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QIDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++I++F LP FS E+ PT+K++R ++++Y+ +I+ Y+
Sbjct: 546 KELAGWEQIKRFTLLPQAFSTQLEEITPTLKLRRKVILQRYKELIEAMYN 595
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 79 VKRWIANYAKSTSLQHYMAYL-EKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + + + ++ + P Y L L+L K++ +G R+ G
Sbjct: 291 LRQWIFNWAIAVGRKRFDTLAKQQKIGFPLKQQYALADKLVLGKLRALLG-GHIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFSFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE-EGNGEICLKEYEANVRTVAKAF 218
+E G + +K Y + A F
Sbjct: 408 NNEILVRGGMVMKGYYKKPQETADTF 433
>gi|51598846|ref|YP_073034.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
gi|51573417|gb|AAU07442.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
Length = 645
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
++ V+ VA L G++R V II + EW D+ A+ G +S +
Sbjct: 39 DFWNEVKRVASGLLHYGIKRGEKVVIISDSRREWVIIDIAALGLGCVDVPRGNDSSEDEL 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV------QYEGKPDKPGVISWDEL 319
+ + S++ VE++KQL+K+L K +K IV YE K V S+ +L
Sbjct: 99 TYIINHSESTFIFVENNKQLQKVLSKKHDLRLVKYIVVIDDDKSYEEKMGTITVFSYKKL 158
Query: 320 MELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
+ELG RA P +S D +E ++ + T++YTSGT G K VML H++ F +
Sbjct: 159 LELGAEHLRANP-KSFDIEIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYD 217
Query: 376 YFKLESAALSVISFLPLSH 394
Y +IS LPL H
Sbjct: 218 YLPAIKPGKIMISILPLWH 236
>gi|423018568|ref|ZP_17009289.1| AMP-binding enzyme family protein 17 [Achromobacter xylosoxidans
AXX-A]
gi|338778330|gb|EGP42805.1| AMP-binding enzyme family protein 17 [Achromobacter xylosoxidans
AXX-A]
Length = 617
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 21/165 (12%)
Query: 67 WKK----VTYKLQTTG-VKRWI--------ANYAKSTSLQHYMAYLEKNVSEPYTYRLVR 113
W+K ++ K+Q G ++RW+ A +A+ ++ Q +N E TY L
Sbjct: 294 WEKLHASISIKMQEAGRLQRWLYRRAMAACAPFAEKSARQ-------RNAGERLTYALWY 346
Query: 114 WLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPD 173
WL+L ++ +GL R RV+++GAAPI+ E+ RYF +L +P+ EV+G++E G PD
Sbjct: 347 WLVLRALQNFIGLRRVRVAMTGAAPIAPEVVRYFRNLGVPLVEVYGLTESTGMIFGQHPD 406
Query: 174 DFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKA 217
K VG I G + ++ + DE + GE+ Y N A A
Sbjct: 407 RVKAGTVGEPILGVEWRLGEADELQVRGEMVFAGYYKNEAATADA 451
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 222 GLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVED 281
GL R V I+ N EW + LGA GG A G+Y T+ E + L +D + V ED
Sbjct: 67 GLSRGGRVAIVAENRLEWLLTQLGAGAVGGVAVGVYATSPAEEMGYVLEHADVELVVCED 126
Query: 282 DKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDELMELGR---AAPDESL 331
+Q +K+L+V + P L+ IV E K ++ ++++ EL G+ A +L
Sbjct: 127 QEQTDKVLQVAHRLPLLRRIVVMETKGLRSYAPAERDRIVAFAELEAEGQRMEAQALPAL 186
Query: 332 DRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLP 391
+ VL+ ++ ++YTSG+ G K MLS+ N+ A I + +++A++ +S+LP
Sbjct: 187 NSVLDGQRLDDLGLMIYTSGSTGKPKGAMLSYRNMRGVAPGIAERLGMDAASVH-LSYLP 245
Query: 392 LSHIAAQTVDIYSVMTVAATLWFAD 416
L H+A Q + + + + A + F +
Sbjct: 246 LCHVAEQMLSTFVPIYLGAQVNFGE 270
>gi|338975469|ref|ZP_08630820.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231213|gb|EGP06352.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 643
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 196 EEGNGEICLKE-------------YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
E GN EI L+E Y+ VR ++LG++R + IIG N P+W +
Sbjct: 24 EHGN-EIALREKDFGLWRVFTWNDYQNRVRDFTLGMVELGIKRGDVIGIIGDNRPDWVAA 82
Query: 243 DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV 302
++ A G + GMY + PE L+ L + I ED++Q++K+L++ + P LK IV
Sbjct: 83 EVAAHAVRGMSLGMYRESLPEEVLYLLTYGETKIVFAEDEEQVDKLLELGDRAPHLKHIV 142
Query: 303 QYE----GKPDKPGVISWDELMELG--RAAPDESL-DRVLETIATNECCTLVYTSGTEGA 355
+ K D P +I D L ++G RAA + L D++++ A ++ L TSGT
Sbjct: 143 YSDPRGMRKYDDPRLIEADVLAKMGRDRAAREPQLYDQMVDATAGDDVAILCTTSGTTSN 202
Query: 356 SKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQ 398
K ML ++ + A + F + +S LPL I Q
Sbjct: 203 PKLAMLKAGSVLRHCATYLS-FDPKGPDDEYVSVLPLPWIMEQ 244
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ ++ +G R R + +G A + + ++F ++ +P+ ++G +E GA T+ D
Sbjct: 331 LVFRALRDRLGFTRLRSAATGGAALGPDTFKFFRAMGVPLRTLYGQTETLGAFTLHPADA 390
Query: 175 FKLDGVGRTIP---GTQTKIVDPDEEGNGEICLK 205
D G IP + +IVDPD G GEI ++
Sbjct: 391 VDPDTTG--IPMGESVEIQIVDPDVNGVGEIVVR 422
>gi|427819365|ref|ZP_18986428.1| putative long-chain fatty-acid--CoA ligase [Bordetella
bronchiseptica D445]
gi|410570365|emb|CCN18538.1| putative long-chain fatty-acid--CoA ligase [Bordetella
bronchiseptica D445]
Length = 621
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA GLE V II N EW + +GA G G+Y T+ + L ++
Sbjct: 63 VALGLRAAGLEPGGKVAIIAENRLEWLLAQMGAGVLGAIPVGVYCTSPAAEVGYVLEHAE 122
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-------PDKPGVISWDELMELGR-- 324
++ V ED +Q +K+L+V A+ P L+ IV E K ++ + S+ EL G
Sbjct: 123 VDMVVCEDQEQTDKVLEVAARLPGLRRIVVMETKGLRNHAEAERARMTSFAELEARGAQC 182
Query: 325 -AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
AA L++ L+ ++ ++YTSG+ G K M+S+ N+ A I +++ +
Sbjct: 183 GAAEQARLEQALDAQTLDDVGLMIYTSGSTGKPKGAMISYRNMRGVAPGIADRLDMDAGS 242
Query: 384 LSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL H+A Q + + + + + + F +
Sbjct: 243 VH-LSYLPLCHVAEQMLSTFVPVYLGSQVNFGE 274
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 25/174 (14%)
Query: 67 WKK----VTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSE-PYTYRLVR-W---LI 116
W+K ++ K+Q +G ++RW+ YA++ L+ +LE + + + RLV W LI
Sbjct: 298 WEKLHAAISIKMQESGRLRRWL--YARA--LRGCAPFLELSRARYGWRERLVYGWHYALI 353
Query: 117 LSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK 176
L + +GL R +V+++GAAPI E+ RYF +L IP+ EV+G++E G PD +
Sbjct: 354 LRALHNFVGLRRVKVAMTGAAPIPPEVLRYFRTLGIPLIEVYGLTESTGMIFGQHPDRVR 413
Query: 177 LDGVGRTIPGTQTKIVDPDEEG----NGEICLKEY----EANVRTVAKAFLKLG 222
+ VG G Q ++ E+G GE+ Y +A+ TV +L G
Sbjct: 414 VGTVGEPTLGVQARV---GEQGELLVRGEMVFHGYYRNPQASADTVRDGWLHTG 464
>gi|404450387|ref|ZP_11015370.1| AMP-forming long-chain acyl-CoA synthetase [Indibacter alkaliphilus
LW1]
gi|403763935|gb|EJZ24853.1| AMP-forming long-chain acyl-CoA synthetase [Indibacter alkaliphilus
LW1]
Length = 586
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
V ++ AFL G+++ V II N PEW + DL G + MY T S + +
Sbjct: 43 VDNLSLAFLATGIDKNDKVAIISNNRPEWNFIDLALQQIGAISVPMYPTISADDYKYIFE 102
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
++ V D++ +K + I+ D GV+ W+E M G +
Sbjct: 103 HAEVKQVFVGDEEIYQK---ARTAAEGTDIIINSFDSID--GVVHWEEFMSKGESGDLAK 157
Query: 331 LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFL 390
L+ E + T++ T++YTSGT G K VML+H N+ N I +SFL
Sbjct: 158 LEEKKEAVQTDDLFTIIYTSGTTGRPKGVMLTHGNVLHNLFAIEDRIIASKGVSKALSFL 217
Query: 391 PLSHIAAQT 399
PL HI +T
Sbjct: 218 PLCHIYERT 226
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 78/144 (54%), Gaps = 17/144 (11%)
Query: 68 KKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTY----RLVRWLILSKVKQA 123
K V+ + TG+K+ + +A + L++ E N ++ + Y +L +I SK ++A
Sbjct: 272 KIVSKGYELTGLKKSLFFWALNLGLKY-----EPNKNQGWWYNFQLKLANKIIFSKWREA 326
Query: 124 MGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG--AHTVSAPDDFKLDGVG 181
+G + +++ SGA+ + L R F S IP+CE +G++E + + +V ++ ++ VG
Sbjct: 327 LGGNVIQIN-SGASALQPRLARVFWSAQIPVCEGYGLTETSPVISASVCNLEEIRIGMVG 385
Query: 182 RTIPGTQTKIVDPDEEGNGEICLK 205
+ + + KI + +GEI +K
Sbjct: 386 KIVKDVEVKIAE-----DGEILVK 404
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q ID N K ++I+KF+ L +++ +GEL PTMK+KR + +Y S I+ Y
Sbjct: 528 QKEIDNLN-KYFGKWEQIKKFKVLHHQWTVESGELTPTMKLKRKVIHSRYASEIESLY 584
>gi|414167846|ref|ZP_11424050.1| hypothetical protein HMPREF9696_01905 [Afipia clevelandensis ATCC
49720]
gi|410887889|gb|EKS35693.1| hypothetical protein HMPREF9696_01905 [Afipia clevelandensis ATCC
49720]
Length = 643
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 196 EEGNGEICLKE-------------YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
E GN EI L+E Y+ VR ++LG++R + IIG N P+W +
Sbjct: 24 EHGN-EIALREKDFGLWRVFTWNDYQNRVRDFTLGMVELGIKRGDVIGIIGDNRPDWVAA 82
Query: 243 DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV 302
++ A G + GMY + PE L+ L + I ED++Q++K+L++ + P LK IV
Sbjct: 83 EVAAHAVRGMSLGMYRESLPEEVLYLLTYGETKIVFAEDEEQVDKLLELGDRAPHLKHIV 142
Query: 303 QYE----GKPDKPGVISWDELMELG--RAAPDESL-DRVLETIATNECCTLVYTSGTEGA 355
+ K D P +I D L ++G RAA + L D++++ A ++ L TSGT
Sbjct: 143 YSDPRGMRKYDDPRLIEADVLAKMGRDRAAREPQLYDQMVDATAGDDVAILCTTSGTTSN 202
Query: 356 SKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQ 398
K ML ++ + A + F + +S LPL I Q
Sbjct: 203 PKLAMLKAGSVLRHCATYLS-FDPKGPDDEYVSVLPLPWIMEQ 244
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ ++ +G R R + +G A + + ++F ++ +P+ ++G +E GA T+ D
Sbjct: 331 LVFRALRDRLGFTRLRSAATGGAALGPDTFKFFRAMGVPLRTLYGQTETLGAFTLHPADA 390
Query: 175 FKLDGVGRTIP---GTQTKIVDPDEEGNGEICLK 205
D G +P + +IVDPD G GEI ++
Sbjct: 391 VDPDTTG--VPMGESVEIQIVDPDVNGVGEIVVR 422
>gi|386867083|ref|YP_006280077.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385701166|gb|AFI63114.1| long-chain-fatty-acid-CoA ligase [Bifidobacterium animalis subsp.
animalis ATCC 25527]
Length = 686
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E ++R VAK + GL++ V + + EW D + GG A +Y T+S E
Sbjct: 123 RETLNDIRQVAKGLMHQGLKKGDGVAFMCHTSYEWDVFDGAVLSIGGVIATIYDTDSAEQ 182
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + +VE ++K K CP LK ++ E + DEL G
Sbjct: 183 IRNIVDNSDAKLLMVETKDMMKKTNLAKEDCPTLKNVMCLENG-------ALDELKAYGS 235
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
+ DE LD + ++ + C++VYTSG+ A K V ++ + A + Y L +
Sbjct: 236 SISDEKLDERIRSVKKTDLCSIVYTSGSTAAPKGVEMTQAHYCSTATNLPDYMPDLLHNK 295
Query: 383 ALSVISFLPLSHIAAQTVD 401
V+ FLP +H A+ ++
Sbjct: 296 RNRVLLFLPQAHSFARAIN 314
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 411 TLWFADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRP 470
T+ A +NA V Q +D+AN + +S A+ ++KF LP +F+ G + +MK+ RP
Sbjct: 601 TMEDAAQNA-AVRAEVQKWVDQAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKIIRP 658
Query: 471 FVVKKYQSIID 481
V+K+Y ++++
Sbjct: 659 KVLKRYNTLLN 669
>gi|416037694|ref|ZP_11573998.1| LOW QUALITY PROTEIN: putative long-chain-fatty-acid--CoA
ligase-like protein [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347995576|gb|EGY36748.1| LOW QUALITY PROTEIN: putative long-chain-fatty-acid--CoA
ligase-like protein [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
Length = 541
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I D +Q ++++ + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFAGDQEQYDQVIDIADECPKLIKIVAMKSTINLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDGKSLADLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QIDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 79 VKRWIANYAKSTSLQHYMAYL-EKNVSEPY--TYRLVRWLILSKVKQAMGLDRCRVSLSG 135
+++WI N+A + + + ++ + P Y L L+L K++ +G R+ G
Sbjct: 291 LRQWIFNWAIAVGRKRFDTLAKQQKIGFPLKQQYALADKLVLGKLRALLG-GHIRMMPCG 349
Query: 136 AAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDG--VGRTIPGTQTKIVD 193
A + + +F S+ + I +GM+E TVS +DF + +G +PG + KI +
Sbjct: 350 GAKLEPTIGLFFHSIGLNIKLGYGMTETTA--TVSCWNDFSFNANSIGTLMPGAEVKIGE 407
Query: 194 PDE-EGNGEICLKEYEANVRTVAKAF 218
+E G + +K Y + A F
Sbjct: 408 NNEILVRGGMVMKGYYKKPQETADTF 433
>gi|294628897|ref|ZP_06707457.1| long-chain-fatty-acid-CoA ligase [Streptomyces sp. e14]
gi|292832230|gb|EFF90579.1| long-chain-fatty-acid-CoA ligase [Streptomyces sp. e14]
Length = 598
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +++ A V T AK + G++ V ++ EW D AG +Y T+
Sbjct: 45 DVTARDFLAEVHTAAKGLIASGIQPGDRVGLMSRTRYEWTLLDFAIWSAGAITVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A CVVE D + V+ P LK++ Q E GV +EL
Sbjct: 105 SPEQVRWILSDSGATACVVEQDAHAAAVESVRESLPALKSVWQIEAG----GV---EELA 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
G+ D +++ ++ T+VYTSGT G K +L+H + +++ +
Sbjct: 158 RAGQDISDATVEERGSLAKADDPATIVYTSGTTGRPKGCVLTHRSFFAECGNVVERLRPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLPL+H+ + V + +M
Sbjct: 218 FRTGECSVLLFLPLAHVFGRLVQVAPMM 245
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+++ L+ SK++ +G R ++SG AP+ L +F + + E +G++E A
Sbjct: 326 HKVFDRLVYSKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATA 384
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYH 227
+ D K+ VG+ +PG+ +I D E +GE KEY N +A
Sbjct: 385 FNPWDRQKIGTVGQPLPGSVVRIADDGEVLLHGEHLFKEYWNNPGATQEAL--------- 435
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLE 286
A WF++ D+G + G+ + T + + + V+ED
Sbjct: 436 --------ADGWFHTGDIGTLDEDGY---LRITGRKKEIIVTAGGKNVAPAVIED----- 479
Query: 287 KILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+++A + +V +G+P +++ DE LGR
Sbjct: 480 ---RIRAHALVAECMVVGDGRPFVGALVTIDEEF-LGR 513
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A Q+A+D N ++S A+ ++KF L F+ +G L P++K+KR V K Y I+ Y
Sbjct: 538 AVQSAVDDGN-AAVSKAESVRKFRILATQFTEESGHLTPSLKLKRNVVAKDYAGEIEALY 596
>gi|238760082|ref|ZP_04621232.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
gi|238701701|gb|EEP94268.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
Length = 599
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 4/228 (1%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
EG ++ ++ + +V ++ A L LG+ V I N+ W +DL + G + +
Sbjct: 33 EGEKQLTWQQVDTHVTRISAALLSLGVGIQERVGIFANNSMAWSLADLAILQLRGVSVPL 92
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISW 316
Y TN+ + + +D I V KQ + L +++ CP+L I+ E D G
Sbjct: 93 YATNTTAQAAYVVNDADVRILFVGGQKQFDIALTLRSLCPQLVQIIALESSVDLRGCGYA 152
Query: 317 DELMEL---GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
L + A L +E+ ++ TL+YTSGT G K VML + N+
Sbjct: 153 QHLADFEQQSNAVQLHLLTSRIESCDLDDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLH 212
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q L + +S + FLPLSH+ + Y + T A ++ D + ++
Sbjct: 213 DQRLTLTAQDVS-LCFLPLSHVFERAWSCYVMHTGAQNVYIRDTDWVR 259
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP F++ TGEL PTMK++R ++++YQ+ ID Y
Sbjct: 549 KELALFEQVKRFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDSMY 597
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++L L+LSK++ +G R R + A + + +F ++ + I +GM+E +
Sbjct: 327 HKLADRLVLSKLRAVLG-GRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGMTETCATVS 385
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAF 218
+DF+ +G+ +PG ++ +E + G I ++ Y + A++F
Sbjct: 386 CWEENDFRFGSIGKPLPGIDVRLGAENEIQVRGPIVMRGYFNKPQETAESF 436
>gi|322435510|ref|YP_004217722.1| AMP-dependent synthetase and ligase [Granulicella tundricola
MP5ACTX9]
gi|321163237|gb|ADW68942.1| AMP-dependent synthetase and ligase [Granulicella tundricola
MP5ACTX9]
Length = 595
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 116/253 (45%), Gaps = 9/253 (3%)
Query: 183 TIPGTQTKIVDPDEEGNGE-ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
T G++ ++ D +G+ + I E +R +A A G+ + V ++ N EW
Sbjct: 15 TSRGSKQAMLWQDVDGSWKPITSAELYGKIRALAAALKSWGVVKGDRVALLSENRWEWAV 74
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
+D G +Y T +PE + L S + + V +Q EK L + P L+ +
Sbjct: 75 TDFACFALGAVDVPLYGTLTPEQLGYSLRDSGSKVAVFSTKEQYEK-LAGAGELPALERV 133
Query: 302 VQYEGKPDKPGVISWDELMEL--GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPV 359
V + + + P S+ ++ME G D S D + ++ TL+YTSGT G K V
Sbjct: 134 VVMD-QGEFPDAESFAKIMEAAAGLQVADASFDAAAREVTGDDLATLIYTSGTTGEPKGV 192
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNA 419
L+H NI N F S ISFLPLSH+ A+ +D Y++M A + + K
Sbjct: 193 RLTHGNIACNLNLSTDPFGFHDTD-SSISFLPLSHVTARHLD-YAMMCHGARIAYCTKFD 250
Query: 420 L--KVYKATQAAI 430
L KAT+ I
Sbjct: 251 LMAAAMKATKPTI 263
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAP 138
VK+ I +A T +H LE +++ L+ SK+++A G +SG AP
Sbjct: 287 VKKGILQWAIKTGEKHRPEVLEGKTPSGLAWKIADKLVYSKIREAFG-GCAHTFVSGGAP 345
Query: 139 ISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKI-VDPDEE 197
+ + +F + I I E +G++E + ++ P + VG + + + D + E
Sbjct: 346 LGMDTAGWFADVGIRIFEGYGLTETSPVIALNYPQTHSIGTVGPVLKNVEVRFAADGELE 405
Query: 198 GNGEICLKEYEANVRTVAKAFLKLG 222
G K Y + A+AF + G
Sbjct: 406 VKGPSIFKGYWQKEKETAEAFTEDG 430
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV Q +D N K + + +++ + ++S+ GE+ P+MK+KR + KKY+ I
Sbjct: 524 KVVAEYQRIVDAVN-KELPPYETMKRIAVVGDEWSVEDGEMTPSMKMKRRVIEKKYEKEI 582
Query: 481 DKFY 484
+FY
Sbjct: 583 GEFY 586
>gi|295134315|ref|YP_003584991.1| long-chain-fatty-acid--CoA ligase [Zunongwangia profunda SM-A87]
gi|294982330|gb|ADF52795.1| long-chain-fatty-acid--CoA ligase [Zunongwangia profunda SM-A87]
Length = 593
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 12/224 (5%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNA-PEWFYSDLGAIYAGGFAA 254
NGE + +Y +++ L+LG++ + +I N EW D+G + G
Sbjct: 29 NGEWVKLSTNQYLDQANKISRGLLRLGIKPNDKIAVISSNNRNEWNIMDIGILQIGAQNV 88
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T S + + + S++ C V D + L K+ +K LK + ++ +
Sbjct: 89 PVYPTISEQEYEYVINHSESIYCFVSDKEVLNKVNAIKENT-HLKEVYSFD---EIEACK 144
Query: 315 SWDELMELGR--AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+W E+++LG + DE R ++ + T + TL+YTSGT G K VMLSH+NI N
Sbjct: 145 NWKEVLDLGEDLSNQDEVQQR-MDAVTTKDLATLIYTSGTTGKPKGVMLSHENIVSNVIG 203
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ + +SFLP+ H+ + + +Y A +++FA+
Sbjct: 204 SAPRVPFDFGTYTALSFLPVCHVFERMI-LYLYQYYAVSIYFAE 246
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 78 GVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAA 137
G+K + N+A S Q Y Y + + R ++ SK K+ +G + +SG+A
Sbjct: 286 GIKTALFNWALSLGHQ-YEPYGANGSWYEFKLGIARKIVFSKWKEGLG-GNIELIVSGSA 343
Query: 138 PISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD 195
+ L R F + IP+ E +G++E + V+ D FK+ VG+ I + KI +
Sbjct: 344 ALQPRLARVFAAAGIPVMEGYGLTETSPVIAVNDERDHNFKIGTVGKPIKNCEVKIAE-- 401
Query: 196 EEGNGEICLK 205
+GEI K
Sbjct: 402 ---DGEILAK 408
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
Q ID N K+ + ++++ F+ P +++ G L PTMKVKR V +KY + + YD
Sbjct: 534 QQDIDFYN-KNFGHWEQVKTFKLTPEVWTVEDGHLTPTMKVKRKNVKEKYSDLYNLIYD 591
>gi|303250865|ref|ZP_07337058.1| long-chain acyl-CoA synthetase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253070|ref|ZP_07534953.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650280|gb|EFL80443.1| long-chain acyl-CoA synthetase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859439|gb|EFM91469.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 591
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ +V + A L G+E + I N P+W +D GA+ +Y TN
Sbjct: 36 DISWQSFQQSVDLFSLALLAHGIEVQQKIAIFAHNMPQWTIADFGALQIRVVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKP----GV 313
+ + L +D I V D +QLE L+V CP L+ IV E +P V
Sbjct: 96 TAKQAEFILNHADIRILFVGDHEQLEAALEVADNCPLLEKIVCMKSQEISLIRPLAHTKV 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN-AAC 372
+W++ + L++ L ++ TL+YTSGT G K VML + NI A
Sbjct: 156 ENWNDFIAYASQDKQTELNQRLADKNLSDLFTLIYTSGTTGEPKGVMLDYANIAHQLHAH 215
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ K++ +S +SFLP SHI + Y + A + D N ++
Sbjct: 216 DLALPKIDENDVS-LSFLPFSHIFERAWVAYVLYRGATVCYLEDTNEVR 263
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y+L L+L+K++ +G R R+ G A + + ++F ++ + I +GM+E
Sbjct: 319 SYKLADKLVLNKLRALLG-GRIRMMPCGGAKLEPTIGQFFQAIGVNIKLGYGMTETTATV 377
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ A + F+ + +GR +P + KI + +E G + ++ Y A AF + G
Sbjct: 378 SCWADEQFEPNSIGRLMPNAEVKIGENNEILVRGGMVMRGYYKRPEETALAFTEDGF 434
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++I+KF LP FSI E+ PT+K++R ++++Y+ I+ Y
Sbjct: 542 KELAHFEQIKKFTLLPQAFSIKMEEITPTLKLRRKVILERYRKQIESMY 590
>gi|307257491|ref|ZP_07539257.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307261901|ref|ZP_07543562.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306864003|gb|EFM95920.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306868401|gb|EFN00217.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 591
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ +V + A L G+E + I N P+W +D GA+ +Y TN
Sbjct: 36 DISWQSFQQSVDLFSLALLAHGIEVQQKIAIFAHNMPQWTIADFGALQIRVVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKP----GV 313
+ + L +D I V D +QLE L+V CP L+ IV E +P V
Sbjct: 96 TAKQAEFILNHADIRILFVGDHEQLEAALEVADNCPLLEKIVCMKSQEISLIRPLAHTKV 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN-AAC 372
+W++ + L++ L ++ TL+YTSGT G K VML + NI A
Sbjct: 156 ENWNDFIAYASQDKQTELNQRLADKNLSDLFTLIYTSGTTGEPKGVMLDYANIAHQLHAH 215
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ K++ +S +SFLP SHI + Y + A + D N ++
Sbjct: 216 DLALPKIDENDVS-LSFLPFSHIFERAWVAYVLYRGATVCYLEDTNEVR 263
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y+L L+L+K++ +G R R+ G A + + ++F ++ + I +GM+E
Sbjct: 319 SYKLADKLVLNKLRALLG-GRIRMMPCGGAKLEPTIGQFFQAIGVNIKLGYGMTETTATV 377
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ A + F+ + +GR +P + KI + +E G + ++ Y A AF + G
Sbjct: 378 SCWADEQFEPNSIGRLMPNAEVKIGENNEILVRGGMVMRGYYKRPEETALAFTEDGF 434
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++I+KF LP FS+ E+ PT+K++R ++++Y+ I+ Y
Sbjct: 542 KELAHFEQIKKFTLLPQAFSVKMEEITPTLKLRRKVILERYRKQIESMY 590
>gi|118470901|ref|YP_888530.1| AMP-binding protein [Mycobacterium smegmatis str. MC2 155]
gi|399988555|ref|YP_006568905.1| Long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis str. MC2
155]
gi|118172188|gb|ABK73084.1| AMP-binding enzyme [Mycobacterium smegmatis str. MC2 155]
gi|399233117|gb|AFP40610.1| Long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis str. MC2
155]
Length = 599
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 19/250 (7%)
Query: 154 ICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRT 213
+ E ++ C AH PD L R + GT T ++ + A +R+
Sbjct: 12 VGEYDNVAGCVYAHETDDPDHVILR---RLVDGTWT-----------DVTCAQAAAQIRS 57
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
A + G++ V I+ EW D + G +Y T++ E L S+
Sbjct: 58 AALGLIAEGVQPGDRVAILSATRYEWPIIDFAILSIGAVTVPIYETSAAEQVRFVLENSE 117
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDESLDR 333
+ + E D +K+ +++ Q P L+ + + +G G + DEL E G+ LD+
Sbjct: 118 SVLVFAETDAHADKVEQLRDQLPALRKVFRIDGS----GTPALDELAEAGKDVDPAELDK 173
Query: 334 VLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA-ALSVISFLPL 392
L I +++ TL+YTSGT G K L+H N+ + F A ++ FLPL
Sbjct: 174 RLANIKSSDPATLIYTSGTTGQPKGCQLTHSNLLHEIRGQKECFPDHLAKGERILVFLPL 233
Query: 393 SHIAAQTVDI 402
+H+ A+ + I
Sbjct: 234 AHVLARAITI 243
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 17/139 (12%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ A+G C ++SG AP+ L ++ + + I E +G++E + A TV+ +D
Sbjct: 333 LVYGKLRAALG-GECHAAISGGAPLGERLGHFYRGVGLSIYEGYGLTETSAAITVNRLND 391
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF 234
K+ VGR +PG +I D +GE+ +K V + K + +I
Sbjct: 392 LKVGSVGRLVPGNSMRIAD-----DGELLVKG-----GVVFNGYWK---NEDETKAVI-- 436
Query: 235 NAPEWFYS-DLGAIYAGGF 252
+A WF++ DLGAI GF
Sbjct: 437 DADGWFHTGDLGAIDDNGF 455
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 429 AIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A+ AN +++SNA+ I+KF LP DF+ TGEL PT+KVKR V +K+ + I Y
Sbjct: 544 AVKEAN-QAVSNAEAIRKFRILPVDFTEDTGELTPTLKVKRKVVAEKFATDIAALY 598
>gi|452855793|ref|YP_007497476.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080053|emb|CCP21814.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 546
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDRLCRQTAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLAHSDVSALIIMDSYRQTSYVEIVNKLIPELKTCKRGRLRSKRYPFLRTVLYIGDKS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ WD L++ + D +LD ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 PPGMHRWDSLLDNAESETDAALDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSCDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|441498863|ref|ZP_20981054.1| Long-chain-fatty-acid--CoA ligase [Fulvivirga imtechensis AK7]
gi|441437318|gb|ELR70671.1| Long-chain-fatty-acid--CoA ligase [Fulvivirga imtechensis AK7]
Length = 588
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
V ++ L LG+++ + + FN PEW ++D G MY ++ E +
Sbjct: 43 VNQLSTGLLALGVKKGDKIALASFNRPEWVFADYAIQQIGAINIPMYPNSTAEDYAFIMN 102
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
++ I D + KI + Q + A+ ++ P W E ++
Sbjct: 103 DAEVKIAFAGDAEIAHKIRRANEQLTDIVALYTFDKIEGTP---FWQEALKPVTENDLSE 159
Query: 331 LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFL 390
++ + I + T++YTSGT G K VMLSH NI N+ + + F + ISFL
Sbjct: 160 IEGLKGQINYEDLATIIYTSGTTGNPKGVMLSHKNILSNSRSVHKAFAMGGPEHRTISFL 219
Query: 391 PLSHIAAQTVDIYSVMTVAATLWFAD 416
PL HI +T +Y+ M + ++++A+
Sbjct: 220 PLCHIFERTA-LYTYMQMGVSIYYAE 244
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 68 KKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRL--VRWLILSKVKQAMG 125
K VT + G+K+ + +A + ++ M +KN Y +L LI SK ++A+G
Sbjct: 274 KIVTKGYELKGLKKSLFFWALELAKKYDM---DKNQGAWYNLQLSLANKLIFSKWREALG 330
Query: 126 LDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIP 185
+ +SG A + L F + I + E +G++E + + S D K+ VG +
Sbjct: 331 -NNIEFIVSGGAALQPRLGHIFWAAKIKVLEAYGLTETSPGVSFSRLDAVKIGTVGPLLD 389
Query: 186 GTQTKIVDPDEEGNGEICLK 205
G Q KI + +GEI +K
Sbjct: 390 GVQVKIAE-----DGEILVK 404
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V K ++ ++ N +S + +KI+KF L ++I GE+ P + +KR + + YQ I
Sbjct: 521 EVIKKYESELETMN-ESFAQYEKIKKFRLLSQPWTIDKGEITPKLSLKRKVIKQHYQHEI 579
Query: 481 DKFYD 485
DK Y+
Sbjct: 580 DKIYE 584
>gi|73748714|ref|YP_307953.1| acyl-CoA synthetase [Dehalococcoides sp. CBDB1]
gi|73660430|emb|CAI83037.1| acyl-CoA synthetase (AMP-forming) / AMP-acid ligase
[Dehalococcoides sp. CBDB1]
Length = 630
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y V+ L LG + V IIG N PEWF+++ A G G+Y + P+
Sbjct: 39 DYYQTVKYFGLGLLSLGTKPSDRVAIIGDNEPEWFWAEFAAQSIGAIPTGIYVDSIPDEV 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELME 321
+ ++ + VV D +Q +K L++ + P L I+ ++ K D P ++S+ E+++
Sbjct: 99 KYIASHAEVRVAVVNDQEQADKFLELLPELPNLIKIIYWDPKGLKNYDDPMLVSFKEVIK 158
Query: 322 LGRAAPDESLD---RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LGR +LD R+L+T ++ + YTSGT G K MLSH ++ A + +
Sbjct: 159 LGREYEKANLDLFERLLDTTKPDDIAFVYYTSGTTGLQKGAMLSHRSLITTAKGFVARYP 218
Query: 379 LESAALSVISFLPLSHIA 396
L S +IS P S +
Sbjct: 219 L-SYKDDLISNFPASWVG 235
>gi|332160398|ref|YP_004296975.1| putative AMP-binding family protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664628|gb|ADZ41272.1| putative AMP-binding enzyme-family protein [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330859306|emb|CBX69653.1| putative long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica
W22703]
Length = 608
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
EG ++ ++ + +V ++ A L LG+ + I N+ W +DL + G + +
Sbjct: 42 EGEKQLTWRQIDTHVTRISAALLSLGVAIQERIGIFANNSMAWSLADLAILQIRGVSVPL 101
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISW 316
Y TN+ ++ + +D I V Q + + +K CP+L IV + D G
Sbjct: 102 YATNTTAQAVYVVNDADVRILFVGGQAQFDVAITLKPLCPQLSHIVVLDPGVDLRGCEYA 161
Query: 317 DELMELGRAAPDESLDRVLETIATNEC-----CTLVYTSGTEGASKPVMLSHDNITFNAA 371
L + PD ++ + L T + C TL+YTSGT G K VML + N+
Sbjct: 162 QHLADF-EQQPD-AVQQHLLTARIDGCDLSDLFTLIYTSGTTGEPKGVMLEYRNMAAQLY 219
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q L S S +SFLPLSH+ + Y + T A ++ +D N ++
Sbjct: 220 LHDQRLTLTSDDTS-LSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVR 268
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP F++ TGEL PTMK++R ++++YQ+ ID Y
Sbjct: 558 KELAKFEQVKRFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDSMY 606
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L L+LSK++ +G + R + A + + +F ++ I I +GM+E +
Sbjct: 336 YKLADRLVLSKLRGVLG-GKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVS 394
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLG 222
DF+ +G+ +PG + ++ +E + G I ++ Y + A++F + G
Sbjct: 395 CWEEKDFRFGSIGKPLPGIEVRLGAENEIQVRGPIVMRGYFNKPQETAESFTEDG 449
>gi|302879073|ref|YP_003847637.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
gi|302581862|gb|ADL55873.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
Length = 595
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 5/215 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ ++ ++ V A L L+R V I+ N P W D A+ G +YT +
Sbjct: 40 ELSWQQMQSEVARWQTALSYLNLQRGDRVAIMLRNCPAWIAFDQAALSLGLVTVPLYTVD 99
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
P+ + + S A + + E +Q + V+ Q + V + PD + L+
Sbjct: 100 RPDNLAYIVNDSGAKVLLFESAEQWLGLRTVREQLQDVVRFVSLDSLPD----LDEARLI 155
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE 380
+ + P+ + +E +++YTSGT G + VMLSH N+ NA + F +
Sbjct: 156 SMAKFLPETAQLLPAAVCRMDELASIIYTSGTTGKPRGVMLSHGNMLSNARACLDTFSVR 215
Query: 381 SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
S + +SFLPLSH +T+ Y + AT+ FA
Sbjct: 216 SEDV-FLSFLPLSHTFERTLGYYLTVMTGATVAFA 249
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 106 PYTYRLVRWLILSKVKQAMGLD----RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
P+ + W +L K+ LD R RV++SG A ++ E R F+ L +PI + +G++
Sbjct: 315 PWRASFLLWPVLQKLVAQKVLDKLGGRLRVAISGGAALAAEFSRVFVGLGLPIVQGYGLT 374
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKI 191
E + + + + D VG+ I G + ++
Sbjct: 375 ETSPVISGNHLGNNFPDSVGQPISGVEVRL 404
>gi|421601350|ref|ZP_16044164.1| long-chain-fatty-acid--CoA ligase, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404266541|gb|EJZ31407.1| long-chain-fatty-acid--CoA ligase, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 635
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y+ VR A ++LGL R + IIG N P+W +++ GG + G+Y E
Sbjct: 46 DYQRRVRDFALGLVELGLGRGDVIGIIGDNRPDWVAAEVATHAIGGLSLGLYRDVLDEEA 105
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE----GKPDKPGVISWDELME 321
+ L +A + ED++Q++K+L + + PKLK I+ + K D P ++S ++ E
Sbjct: 106 SYLLTYGEARLVFAEDEEQVDKLLALAERVPKLKHIIYSDPRGMRKYDDPRLMSAEKFAE 165
Query: 322 LGRAAPD---ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LGRA E DR+++ + L TSGT K ML+ + + A + F
Sbjct: 166 LGRARATREPELYDRLVDATKGEDVAILCTTSGTTSHPKLAMLAAGRVLGHCATYLA-FD 224
Query: 379 LESAALSVISFLPLSHIAAQ 398
+ +S LPL I Q
Sbjct: 225 PKRPNDEYVSVLPLPWIMEQ 244
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
++ ++ +G R R + +G A + E ++F ++ +P+ ++G +E GA+T+
Sbjct: 331 ILFRALRDRLGFTRLRSAATGGAALGPETFKFFQAMGVPLRTLYGQTELLGAYTLHPEGK 390
Query: 175 FKLDGVGRTIPGT-QTKIVDPDEEGNGEICLK 205
D G + + + +I + D G GEI ++
Sbjct: 391 VDPDTTGVPMADSVEIRIDNADVHGVGEIVVR 422
>gi|29832611|ref|NP_827245.1| acyl-CoA synthetase, long-chain fatty acid:CoA ligase [Streptomyces
avermitilis MA-4680]
gi|29609731|dbj|BAC73780.1| putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase
[Streptomyces avermitilis MA-4680]
Length = 598
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ + A VR AK + G++ V ++ EW D AG +Y T+
Sbjct: 45 DVTATAFLAEVRAAAKGLIASGVQPGDRVGLMSRTRYEWTLLDFAIWSAGAITVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A CVVE D + V+ + P LK + Q D GV +EL
Sbjct: 105 SPEQVQWILGDSGATACVVELDTHAASVESVRDRLPALKHVWQI----DTGGV---EELG 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
LGR D +++ ++ T+VYTSGT G K +L+H I++ +
Sbjct: 158 RLGRDVSDATVEERSSLAKADDPATIVYTSGTTGRPKGCVLTHRAFFAECGNIVERLRPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLPL+H+ + V + +M
Sbjct: 218 FRTGECSVLLFLPLAHVFGRLVQVAPMM 245
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 32/224 (14%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+ L+ SK++ +G + ++SG AP+ L +F + + E +G++E A
Sbjct: 326 YKTFDKLVYSKLRAVLG-GKGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTESCAATA 384
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYH 227
+ D K+ VG+ +PG+ +I D E +GE KEY N A+A
Sbjct: 385 FNPWDRTKIGTVGQPLPGSVIRIADDGEVLLHGEHLFKEYWNNEGATAEAL--------- 435
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLE 286
A WF++ D+G + G+ + T + + + V+ED
Sbjct: 436 --------ADGWFHTGDIGTLDEDGY---LRITGRKKEIIVTAGGKNVAPAVIED----- 479
Query: 287 KILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
+++A + +V +G+P +++ D+ LGR A +
Sbjct: 480 ---RIRAHALVAECMVVGDGRPFVGALVTIDDEF-LGRWAAEHG 519
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A Q+A+D N ++S A+ ++KF L + F+ +G L P++K+KR V K Y I+ Y
Sbjct: 538 AVQSAVDDGN-AAVSKAESVRKFRILSSQFTEESGHLTPSLKLKRHVVAKDYADEIEAIY 596
>gi|307246336|ref|ZP_07528414.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306852746|gb|EFM84973.1| long-chain-fatty-acid--CoA ligase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 591
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I + ++ +V + A L G+E + I N P+W +D GA+ +Y TN
Sbjct: 36 DISWQSFQQSVDLFSLALLAHGIEVQQKIAIFAHNMPQWTIADFGALQIRVVTVPIYATN 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPDKP----GV 313
+ + L +D I V D +QLE L+V CP L+ IV E +P V
Sbjct: 96 TAKQAEFILNHADIRILFVGDHEQLEAALEVADNCPLLEKIVCMKSQEISLIRPLAHTKV 155
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN-AAC 372
+W++ + L++ L ++ TL+YTSGT G K VML + NI A
Sbjct: 156 ENWNDFIAYASQDKQTELNQRLADKNLSDLFTLIYTSGTTGEPKGVMLDYANIAHQLHAH 215
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+ K++ +S +SFLP SHI + Y + A + D N ++
Sbjct: 216 DLALPKIDENDVS-LSFLPFSHIFERAWVAYVLYRGATVCYLEDTNEVR 263
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y+L L+L+K++ +G R R+ G A + + ++F ++ + I +GM+E
Sbjct: 319 SYKLADKLVLNKLRALLG-GRIRMMPCGGAKLEPTIGKFFQAIGVNIKLGYGMTETTATV 377
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
+ A + F+ + +GR +P + KI + +E G + ++ Y A AF + G
Sbjct: 378 SCWADEQFEPNSIGRLMPNAEVKIGENNEILVRGGMVMRGYYKRPEETALAFTEDGF 434
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++I+KF LP FS+ E+ PT+K++R ++++Y+ I+ Y
Sbjct: 542 KELAHFEQIKKFTLLPQAFSVKMEEITPTLKLRRKVILERYRKQIESMY 590
>gi|289432740|ref|YP_003462613.1| AMP-dependent synthetase and ligase [Dehalococcoides sp. GT]
gi|452203700|ref|YP_007483833.1| long-chain-fatty-acid--CoA ligase [Dehalococcoides mccartyi DCMB5]
gi|288946460|gb|ADC74157.1| AMP-dependent synthetase and ligase [Dehalococcoides sp. GT]
gi|452110759|gb|AGG06491.1| long-chain-fatty-acid--CoA ligase [Dehalococcoides mccartyi DCMB5]
Length = 630
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y V+ L LG + V IIG N PEWF+++ A G G+Y + P+
Sbjct: 39 DYYQTVKYFGLGLLSLGTKPSDRVAIIGDNEPEWFWAEFAAQSIGAIPTGIYVDSIPDEV 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELME 321
+ ++ + VV D +Q +K L++ + P L I+ ++ K D P ++S+ E+++
Sbjct: 99 KYIASHAEVRVAVVNDQEQADKFLELLPELPNLIKIIYWDPKGLKNYDDPMLVSFKEVIK 158
Query: 322 LGRAAPDESLD---RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LGR +LD R+L+T ++ + YTSGT G K MLSH ++ A + +
Sbjct: 159 LGREYEKANLDLFERLLDTTKPDDIAFVYYTSGTTGLQKGAMLSHRSLITTAKGFVARYP 218
Query: 379 LESAALSVISFLPLSHIA 396
L S +IS P S +
Sbjct: 219 L-SYKDDLISNFPASWVG 235
>gi|386311332|ref|YP_006007388.1| long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|433551437|ref|ZP_20507479.1| Long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica IP
10393]
gi|318607143|emb|CBY28641.1| long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|431787619|emb|CCO70519.1| Long-chain-fatty-acid--CoA ligase [Yersinia enterocolitica IP
10393]
Length = 608
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
EG ++ ++ + +V ++ A L LG+ + I N+ W +DL + G + +
Sbjct: 42 EGEKQLTWRQIDTHVTRISAALLSLGVAIQERIGIFANNSMAWSLADLAILQIRGVSVPL 101
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISW 316
Y TN+ ++ + +D I V Q + + +K CP+L IV + D G
Sbjct: 102 YATNTTAQAVYVVNDADVRILFVGGQAQFDVAITLKPLCPQLSHIVVLDPGVDLRGCEYA 161
Query: 317 DELMELGRAAPDESLDRVLETIATNEC-----CTLVYTSGTEGASKPVMLSHDNITFNAA 371
L + PD ++ + L T + C TL+YTSGT G K VML + N+
Sbjct: 162 QHLADF-EQQPD-AVQQHLLTARIDGCDLSDLFTLIYTSGTTGEPKGVMLEYRNMAAQLY 219
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q L S S +SFLPLSH+ + Y + T A ++ +D N ++
Sbjct: 220 LHDQRLTLTSDDTS-LSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVR 268
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP F++ TGEL PTMK++R ++++YQ+ ID Y
Sbjct: 558 KELAKFEQVKRFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDSMY 606
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L L+LSK++ +G + R + A + + +F ++ I I +GM+E +
Sbjct: 336 YKLADRLVLSKLRGVLG-GKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVS 394
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLG 222
DF+ +G+ +PG + ++ +E + G I ++ Y + A++F + G
Sbjct: 395 CWEEKDFRFGSIGKPLPGIEVRLGAENEIQVRGPIVMRGYFNKPQETAESFTEDG 449
>gi|300726272|ref|ZP_07059725.1| AMP-binding family protein [Prevotella bryantii B14]
gi|299776469|gb|EFI73026.1| AMP-binding family protein [Prevotella bryantii B14]
Length = 602
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ ++ V+ V+ A L LGL+ + + N ++ Y+D GA + Y T+
Sbjct: 36 DVSWNQFSLRVKQVSNALLNLGLKPQDKIAVFSQNCIQYLYTDFGAYGVRVISIPFYATS 95
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG----KPDKPGVISW 316
S + + L S+ I V + +Q +K +V A CP L+ IV Y+ P + +
Sbjct: 96 SEQQIQYMLNDSEIRILFVGEQEQYDKAHRVFALCPTLERIVIYDPSVRISSHDPNTLYF 155
Query: 317 DELMELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDN----ITFNAA 371
++ ++LG P +S ++++ + + C ++YTSGT G SK V+L+++ + NA
Sbjct: 156 EDFIKLGENLPRQSEVEKLWSEASDKDICNILYTSGTTGDSKGVVLTYEQYKAALEANAK 215
Query: 372 CIIQYFKLESAALSVISFLPLSHI 395
C+ + VI+FLP +HI
Sbjct: 216 CVPV-----NENDRVINFLPFTHI 234
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 424 KATQAAIDRANL--KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
K + DR + ++ ++I++F L FS+ +GEL T+K++R + K ++ IID
Sbjct: 538 KVVKMMFDRIKTLQQQLAPYEQIKQFTLLAHHFSMESGELTNTLKIRRSVIYKNFKEIID 597
Query: 482 KFYD 485
K Y+
Sbjct: 598 KMYE 601
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS---AP 172
IL V++ +GLD + + A +S E++ + S+ I + +G++E TVS A
Sbjct: 336 ILGLVRKQLGLDHPHIFPTAGAYVSPEVEEFIHSIGINMIVGYGLTESLA--TVSCDHAN 393
Query: 173 DDFKLDGVGRTIPGTQTKIVDPDE 196
+ F + VGR I G Q KI + DE
Sbjct: 394 EPFTIGSVGRPIDGIQIKIGENDE 417
>gi|209696156|ref|YP_002264086.1| AMP-binding protein [Aliivibrio salmonicida LFI1238]
gi|208010109|emb|CAQ80434.1| putative AMP-binding enzyme [Aliivibrio salmonicida LFI1238]
Length = 611
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E+ + T++ A L GL+ V I N P W +D + +Y TN
Sbjct: 43 DITWGEFGQQMDTLSLALLAHGLKIQEKVGIFANNMPRWTVADFATMQLRSVPVPIYPTN 102
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+P + + ++ I V + Q + + QCP+L IV D ISW+
Sbjct: 103 TPTQAAYVINDANIRILFVGEQAQYNSAVVIFEQCPQLTHIVALSDDIDLNDHEAGISWN 162
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ + + E L L+T ++ TL+YTSGT G K VML + NI
Sbjct: 163 DFISAANESHQEELTHRLDTAEMDDLLTLIYTSGTTGEPKGVMLDYTNIGSQLEGHNTNL 222
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L +S + FLPLSH+ + Y + A + + N +K
Sbjct: 223 ALTEKDVS-LCFLPLSHVFERAWTFYVLYKGAINCYLPNTNLIK 265
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 433 ANL-KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
ANL K ++ ++++KF L FS+ GEL PT K++R + ++YQ I++ YD
Sbjct: 551 ANLQKELARFEQVKKFTLLSKAFSMDKGELTPTQKLRRKVISERYQDEIEEMYD 604
>gi|326333923|ref|ZP_08200154.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
gi|325948284|gb|EGD40393.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
Length = 619
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 9/218 (4%)
Query: 191 IVDPDEEGNGE----ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGA 246
+V E GE + KE +A + LGLE V I EW +DL
Sbjct: 40 VVGSTTEAGGEEWKSLTWKEASDQASRLAAGLVSLGLELEQRVGIASTTRYEWIIADLAV 99
Query: 247 IYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG 306
+ AGG +Y T + + + L ++ EDD QL KI + A P++ ++ ++G
Sbjct: 100 MLAGGATTTVYPTTNVDDTAYILGDAECRFVFAEDDTQLAKIAERAADLPEIVKVITFDG 159
Query: 307 KPDKPGVISWDELMELGRAAPDESLDRVLET---IATNECCTLVYTSGTEGASKPVMLSH 363
D VI D+L +G E D + ET I + TLVYTSGT G K V L H
Sbjct: 160 ATDGDRVIGLDDLAAIGDKYLAEHPDLIEETAAKITPDHLATLVYTSGTTGRPKGVRLLH 219
Query: 364 DNITFNAACI-IQYFKLESAALSVISFLPLSHIAAQTV 400
+ I +Q L L + +LP+SH+ + +
Sbjct: 220 RAWVYEGEAIRVQGDVLGPDDLQFL-WLPMSHVFGKVL 256
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSKV+ G R R +SG+AP++ ++ +F + I I E +G +E A +V ++
Sbjct: 351 LVLSKVRDRFG-GRVRFFISGSAPLNRDIAEWFRAAGILIMEGYGSTENAAGASVGTLEE 409
Query: 175 FKLDGVGRTIPGTQTKIVDPDE 196
KL VG+ PG++ KI + DE
Sbjct: 410 NKLGTVGKAFPGSEVKIGENDE 431
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 430 IDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+D N S++ + I+K+E L D ++ GEL P++KVKR V ++ + ID FY
Sbjct: 563 VDELN-ASLNRWETIKKWEILEHDLTVERGELTPSLKVKRNVVEEREKERIDAFY 616
>gi|417751086|ref|ZP_12399426.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium avium
subsp. paratuberculosis S397]
gi|336457474|gb|EGO36483.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium avium
subsp. paratuberculosis S397]
Length = 606
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 102 NVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
++E Y L+LSKV++ +G+DR R+ ++GAAPI E+ + L L IP+CE +GM+
Sbjct: 313 GLAEKLRYAFADRLVLSKVRRRLGMDRLRIGVTGAAPIPREVHEFVLGLGIPVCEGYGMT 372
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
EC TV+ P+ K+ VG +PGT+ + +GE+ ++
Sbjct: 373 ECTAGATVNRPERIKIGTVGTPVPGTEVTVAS-----DGEVLVR 411
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++Y VR +A LG+ +V ++ N PE+ D ++ G +Y TN
Sbjct: 38 ITWRQYRDRVRAIAAGLAGLGVGNGDTVALMMSNRPEFHLCDTAVLHTGATPFSVYNTNP 97
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
PE + +D ++ + E L ++L Q ++ +V +G + G I D+L
Sbjct: 98 PELLAYQFDNADNHVVICE-GTFLPQVLAAAQQGGTVEHVVCVDGAAN--GAIGLDQL-- 152
Query: 322 LGRAAPDESLD--RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
A+P D R + ++ T+VYTSGT G K V L+H N NA + +
Sbjct: 153 --EASPAAGFDFERSWRAVGPDDVLTIVYTSGTTGPPKGVELTHTNFIENARITEEVGGI 210
Query: 380 ESAALSVISFLPLSHIAAQTVDIY 403
A +V S+LP +H A + + Y
Sbjct: 211 THADRAV-SYLPDAHAANRWITHY 233
>gi|254775190|ref|ZP_05216706.1| FadD11_2 [Mycobacterium avium subsp. avium ATCC 25291]
Length = 606
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 102 NVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
++E Y L+LSKV++ +G+DR R+ ++GAAPI E+ + L L IP+CE +GM+
Sbjct: 313 GLAEKLRYAFADRLVLSKVRRRLGMDRLRIGVTGAAPIPREVHEFVLGLGIPVCEGYGMT 372
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
EC TV+ P+ K+ VG +PGT+ + +GE+ ++
Sbjct: 373 ECTAGATVNRPERIKIGTVGTPVPGTEVTVAS-----DGEVLVR 411
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 6/202 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++Y VR +A LG+ +V ++ N PE+ D ++ G +Y TN
Sbjct: 38 ITWRQYRDRVRAIAAGLAGLGVGNGDTVALMMSNRPEFHLCDTAVLHTGATPFSVYNTNP 97
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
PE + +D ++ + E L ++L Q ++ +V +G + G I +L
Sbjct: 98 PELLAYQFDNADNHVVICE-GTFLPQVLAAAQQGGTVEHVVCVDGAAN--GAIGLGQLE- 153
Query: 322 LGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
A D +R + ++ T+VYTSGT G K V L+H N NA + +
Sbjct: 154 -ASPAADFDFERSWRAVGPDDVLTIVYTSGTTGPPKGVELTHTNFIENARITEEVGGITH 212
Query: 382 AALSVISFLPLSHIAAQTVDIY 403
A +V S+LP +H A + + Y
Sbjct: 213 ADRAV-SYLPDAHAANRWITHY 233
>gi|418240075|ref|ZP_12866618.1| putative AMP-binding enzyme-family protein [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|351780578|gb|EHB22648.1| putative AMP-binding enzyme-family protein [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
Length = 599
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
EG ++ ++ + +V ++ A L LG+ + I N+ W +DL + G + +
Sbjct: 33 EGEKQLTWRQIDTHVTRISAALLSLGVAIQERIGIFANNSMAWSLADLAILQIRGVSVPL 92
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISW 316
Y TN+ ++ + +D I V Q + + +K CP+L IV + D G
Sbjct: 93 YATNTTAQAVYVVNDADVRILFVGGQAQFDVAITLKPLCPQLSHIVVLDPGVDLRGCEYA 152
Query: 317 DELMELGRAAPDESLDRVLETIATNEC-----CTLVYTSGTEGASKPVMLSHDNITFNAA 371
L + PD ++ + L T + C TL+YTSGT G K VML + N+
Sbjct: 153 QHLADF-EQQPD-AVQQHLLTARIDGCDLSDLFTLIYTSGTTGEPKGVMLEYRNMAAQLY 210
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q L S S +SFLPLSH+ + Y + T A ++ +D N ++
Sbjct: 211 LHDQRLTLTSDDTS-LSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVR 259
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP F++ TGEL PTMK++R ++++YQ+ ID Y
Sbjct: 549 KELAKFEQVKRFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDSMY 597
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L L+LSK++ +G + R + A + + +F ++ I I +GM+E +
Sbjct: 327 YKLADRLVLSKLRGVLG-GKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVS 385
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLG 222
DF+ +G+ +PG + ++ +E + G I ++ Y + A++F + G
Sbjct: 386 CWEEKDFRFGSIGKPLPGIEVRLGAENEIQVRGPIVMRGYFNKPQETAESFTEDG 440
>gi|108757205|ref|YP_631168.1| long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK 1622]
gi|108461085|gb|ABF86270.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK
1622]
Length = 620
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ ++ V+ ++ + G++ V I + +W D+ A +Y +N
Sbjct: 45 DVTFAQFLDEVKALSAGLVAQGVKPGDRVAIFANTSLQWLICDVAISAAQAITVPIYASN 104
Query: 261 SPEACLHCLVTSDANICVVEDDK-------QLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+P+ C + L S+ + V++D+ +L ++ + A+CP L+ IV +EG
Sbjct: 105 TPDECRYILNHSETTLVFVDNDEKDARQAGRLTRLRQKLAECPALRRIVAFEGPVAGGTE 164
Query: 314 ISWDELMELGR----AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
+S +++ GR A PD+ RV ++ + +++YTSGT G K V+L+H N F
Sbjct: 165 LSLADVIAQGRTEHAARPDDFEARV-AGVSMEDTASIIYTSGTTGDPKGVILTHRNWAFE 223
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTV 400
A Q + + SV+ FLPL+H+ AQ V
Sbjct: 224 AKA-AQSVGMMVPSDSVMLFLPLAHVFAQVV 253
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 109 YRLVRWLILSKVKQAMGLD---RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
+ L + L+ SKV A+ RV +SG AP+S ++ +F L + + E +G++E
Sbjct: 339 FALAKKLVFSKVHAAISEKLGGNMRVFISGGAPLSPKIGYFFDLLGLKVLEGYGLTETCA 398
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIV-DPDEEGNGEICLKEYEANVRTVAKAFLKLGLE 224
TV+ K+ VG +PG + I D + G +K Y N A+A
Sbjct: 399 GTTVNREHKIKIGSVGAPVPGMEVMIASDGEILIRGPAVMKGYYKNPEATAEA------- 451
Query: 225 RYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+A WF++ D+G + A +
Sbjct: 452 ---------IDAENWFHTGDIGELDADNY 471
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V A +AA+D+ N + A +++F L DFS T EL P + VKR +KY++ +
Sbjct: 551 EVQAAVKAAVDQVNTQQPPYA-TLKRFTVLENDFSQETEELTPKLSVKRKVCTQKYRAQL 609
Query: 481 DKFYD 485
D+ Y+
Sbjct: 610 DRMYE 614
>gi|163756365|ref|ZP_02163479.1| hypothetical protein KAOT1_01914 [Kordia algicida OT-1]
gi|161323717|gb|EDP95052.1| hypothetical protein KAOT1_01914 [Kordia algicida OT-1]
Length = 591
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 6/198 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY +++ L+LG++ + +I N EW D+G + G +Y T + E
Sbjct: 38 QEYIDQANAISRGLLRLGVQPNDKIAVISTTNRTEWNIMDIGILQTGAQNVPIYPTIAKE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S++ C V D + +EK+ ++K KLK + ++ + G +W E+++LG
Sbjct: 98 DYEYILNHSESIYCFVSDIEIIEKLNQIKGNT-KLKGVYTFD---EITGEANWTEVLKLG 153
Query: 324 R-AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+ D+ L + + + TL+YTSGT G K VML+H N+ N + L +
Sbjct: 154 EDTSNDDELQARKDAVTPQDLATLIYTSGTTGKPKGVMLAHSNLVSNVLDSQKRVPLHNG 213
Query: 383 ALSVISFLPLSHIAAQTV 400
+SFLP+ H+ + +
Sbjct: 214 KAKALSFLPVCHVFERMI 231
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 77 TGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGA 136
TG+K+ + +A L+ Y Y + + ++ R LI SK ++ +G + +SG+
Sbjct: 285 TGIKKKLFFWAIELGLK-YEPYGQNGWWYEFQLKIARKLIFSKWQEGLG-GNLELMVSGS 342
Query: 137 APISTELKRYFLSLDIPICEVFGMSECAGAHTVSAP--DDFKLDGVGRTIPGTQTKIVDP 194
AP+ L R F + IPI E +G++E + +V+ F++ VGR I + KI D
Sbjct: 343 APLQARLTRVFAAAGIPIMEGYGLTETSPVVSVNDQRGGGFRIGTVGRIIDNVEVKIAD- 401
Query: 195 DEEGNGEICLK 205
+GEI +K
Sbjct: 402 ----DGEILVK 408
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
Q +D AN + ++I++FE +P +SI GEL PTMK+KR + + Y+ DK YD
Sbjct: 532 QKEVDEAN-SNFGKWEQIKRFELIPKVWSIDGGELTPTMKMKRKVIKEIYKDYCDKIYD 589
>gi|262166521|ref|ZP_06034258.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
gi|262026237|gb|EEY44905.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
Length = 601
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++ + ++ A L G+ + I N P W +D A+ +Y TN+
Sbjct: 36 ISWHQFGEQLDALSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPGVISWDE 318
PE + L +DA + V + Q + L QCP+L+ IV D + WD+
Sbjct: 96 PEQAAYILQNADAKVVFVGEQPQFDAALSQFEQCPELRLIVAMNPNIDLKQASCAMHWDD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ + L ++E ++ TL+YTSGT G K VML + NI Q
Sbjct: 156 FVAQNQTKDHTPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLN 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LTQDDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLHD 252
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
++L L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 NHQLADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDDFKL--DGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
T+S DD+ D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TISCWDDYSFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLEKETAESFDEHGF 439
>gi|384265593|ref|YP_005421300.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387898579|ref|YP_006328875.1| AMP-binding protein [Bacillus amyloliquefaciens Y2]
gi|380498946|emb|CCG49984.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387172689|gb|AFJ62150.1| AMP-binding domain protein [Bacillus amyloliquefaciens Y2]
Length = 546
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 17/223 (7%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++ R AK +KLG+E+ V I N PEW + G + T
Sbjct: 39 EFDRLCRQTAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQIAEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLKA---------------IVQYEGKPD 309
+ L SD + ++ D +Q + V P+LK V Y G
Sbjct: 99 DYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPELKTCERGRLRSKRYPFLRTVLYIGDKS 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ WD L++ + D LD ++++ ++C + YTSGT G K VMLSH NI N
Sbjct: 159 PPGMHRWDSLLKDAESVTDAELDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFNIVNN 218
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
AA I + KL S I +P H + + + ++ A +
Sbjct: 219 AANIAECMKLTSCDRLCIP-VPFFHCFGCVLGVLACVSAGAAM 260
>gi|427428169|ref|ZP_18918211.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
gi|425882870|gb|EKV31549.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
Length = 670
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 12/222 (5%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +E V +A+ G++ V I+ N PEW +D+ A+ G YTTN+
Sbjct: 45 MSWRETAERVDALAQGLALRGIKPGDRVMIVSENRPEWLIADMAAMAIGAITVPAYTTNT 104
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK--PDKPGV--ISWD 317
LH L S A VV +++ AQ + ++ + + PGV + W
Sbjct: 105 VADHLHILNDSGAAAVVVSTRALAKRVYAAAAQASETPFVITIDDQALAQNPGVETVKWM 164
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+L+ G+ + E ++ ++YTSGT GA K VMLSH N+ N C+ +
Sbjct: 165 QLIHDGQPL---GRPKHWEGAEADDTACIIYTSGTGGAPKGVMLSHKNVLAN--CMGAFD 219
Query: 378 KLESAALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
LE L +SFLPLSH + + +++ A +++A+
Sbjct: 220 VLEILGLGDEVFLSFLPLSHSYEHSAGQFFPISIGAQIYYAE 261
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ KV Q G R + +SG AP++ ++ +F++LD+PI + +G +E A +V P
Sbjct: 336 LVRRKVAQRFG-GRLKALVSGGAPLNYDIGLFFMALDVPILQGYGQTEAAPVISVQRPGS 394
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEY 207
+L+ VG + G + +I + E G + ++ Y
Sbjct: 395 VRLESVGPPLKGVEVQIAEDGEILARGPMVMRGY 428
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+ +A A+ R N ++++N +KI++F P F++ G L PT+K++R + Y+ +++
Sbjct: 607 LVEALSQAVSRVN-RNMANVEKIRRFCVAPEGFTVENGMLTPTLKIRRHVIRDTYKDMLE 665
Query: 482 KFYD 485
+ Y+
Sbjct: 666 RLYE 669
>gi|304383715|ref|ZP_07366174.1| long-chain-fatty-acid--CoA ligase [Prevotella marshii DSM 16973]
gi|304335239|gb|EFM01510.1| long-chain-fatty-acid--CoA ligase [Prevotella marshii DSM 16973]
Length = 602
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E+ V+ V+ A L +G++ +V + NA E+ Y+D GA Y T+S +
Sbjct: 41 EFSDKVKLVSNALLNIGVKVQENVGVFSQNAVEYLYTDFGAYGVRAVMIPFYATSSEQQL 100
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG----KPDKPGVISWDELME 321
+ + + + V + +Q +K ++ + CP L+ IV ++ + P + +D+ ++
Sbjct: 101 QYVINDAQIRLLFVGEQEQYDKARRLISLCPSLERIVIFDSGVSIHANDPNALYFDDFLK 160
Query: 322 LGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDN----ITFNAACIIQY 376
L P ++ ++++ ++ C ++YTSGT G SK VML++ + N AC+
Sbjct: 161 LAEGLPRQTEVEQLWAQANDDDLCNILYTSGTSGDSKGVMLTYGQYAAAMKANDACVPV- 219
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSV 405
A VI+FLP++HI + DI ++
Sbjct: 220 ----GAKDRVITFLPVTHIFERAWDILAL 244
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 67 WKKVTYKLQ-----TTGVKRWIANYAKSTSLQHYMAYLEKNVSEP----YTYRLVRWLIL 117
W+KV K+Q + +++ I A ST +H + Y+ K P YRL LIL
Sbjct: 278 WEKVYNKVQERIDAASPIQKKIFKEALSTGRKHNIDYIGKGKRPPIGLALRYRLFDRLIL 337
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD--- 174
S V++ +GL+ + + + IS E++ + ++ I + +G++E TVS
Sbjct: 338 SLVRKQIGLEHPNIFPTAGSTISPEIETFAHAVGIDMIAGYGLTESLA--TVSCDHKGQR 395
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
F + VGR I G + KI + N EI LK
Sbjct: 396 FTVGSVGRPIEGIEIKIGE-----NNEILLK 421
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ ++N +KI++F LP SI GEL T+KVKR + K Y + I+K Y+
Sbjct: 552 QQLANYEKIKRFTLLPRPLSIENGELTNTLKVKRGVLYKNYAAEIEKMYE 601
>gi|229524469|ref|ZP_04413874.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
gi|229338050|gb|EEO03067.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
Length = 601
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 7/224 (3%)
Query: 199 NGE---ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
NG+ I ++ + ++ A L G+ + I N P W +D A+
Sbjct: 30 NGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPG 312
+Y TN+PE + L +D + V + Q + L QCP+L+ IV D
Sbjct: 90 IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
+ WDE + L+ ++E ++ T +YTSGT G K VML + NI
Sbjct: 150 AMHWDEFVAQSHHQDRAPLNALIEQANYDDLFTFIYTSGTTGTPKGVMLDYRNIGAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLNLTQEDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+++ L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 SHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLDKETAESFDEHGF 439
>gi|372222584|ref|ZP_09501005.1| long-chain-fatty-acid--CoA ligase [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 589
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 7/214 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTNSPE 263
+EY +++ L++G++ + +I N EW D+G + G +Y T S E
Sbjct: 38 QEYIDKANAISRGLLRMGVKPNDKIAVISMTNRSEWSILDVGILQIGAQNVPIYPTISEE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
+ L S+A C V D+ L+K+L + L+ + ++ + +W++++E G
Sbjct: 98 DYEYVLNHSEAKFCFVSCDEVLQKVLSISGNVKNLEDVFSFDQLKN---CNNWEQVLEKG 154
Query: 324 R-AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+ E ++++ + + TL+YTSGT G K VML+H+NI N + +
Sbjct: 155 KDTGNQEEVEKLKNAVKPEDLATLIYTSGTTGRPKGVMLTHNNIVSNVVKSEERVPFVAG 214
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
A + +SFLP+ HI + + +Y + ++FA+
Sbjct: 215 A-TALSFLPVCHIFERML-LYLYQYCSIEIYFAE 246
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q +D AN + + +K++KF P +S+ G L PTMK++R + KYQ +
Sbjct: 525 QVLERYQEEVDLAN-EDFAKWEKVKKFRLTPDAWSVDDGHLTPTMKLRRKIIKAKYQDLY 583
Query: 481 DKFY 484
Y
Sbjct: 584 KDIY 587
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 110 RLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV 169
+L R LI SK K+ +G +SG+A + L + F + ++P+ E +G++E + +V
Sbjct: 317 KLARKLIFSKWKEGLG-GNLSTMVSGSAALQPRLAKVFAAAEMPVMEGYGLTETSPVISV 375
Query: 170 SAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ + +K+ VG+ + + KI + +GEI K
Sbjct: 376 NEVKNKGWKIGSVGKILADVEVKIAE-----DGEILCK 408
>gi|407069899|ref|ZP_11100737.1| long-chain-fatty-acid--CoA ligase [Vibrio cyclitrophicus ZF14]
Length = 602
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 16/297 (5%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ + T++ A L GL + I N P+W +D ++ A +Y TN+
Sbjct: 36 ISWEQFGQQIDTLSLALLAQGLRVQDKIGIFSNNMPQWTVADFASLQARLVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWDE 318
+ + +D I V + Q + + + +C +L+ +V + +SW +
Sbjct: 96 AAQSSYIIQNADVKILFVGEQAQFDAAVSLFEECEQLEVVVAMSNDINIQEHSFAVSWQD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
M G A LD L + ++ TL+YTSGT G K VML + NI + +
Sbjct: 156 FMARGVEAQQVELDVRLADASMDDLLTLIYTSGTTGQPKGVMLDYTNIGYQLKGHDERLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD----KNALKVYKAT-QAAIDRA 433
L +S + FLPLSH+ + Y++ A + D ++AL K T A+ R
Sbjct: 216 LTKDDVS-LCFLPLSHVFERAWTFYALYKGATNCYLQDTMQVRDALSDVKPTVMCAVPRF 274
Query: 434 NLKSISN-AQKIQKFEFLPADFSIPTGELGPTMKV-----KRP-FVVKKYQSIIDKF 483
K S +K+ K F+ +G + V + P F++KK ++ DK
Sbjct: 275 YEKIFSAIHEKVSKAPFIRKVLFTWAVNMGAKLSVCHQEGRTPSFMLKKSHALADKL 331
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
+ ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y+
Sbjct: 547 QELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYN 596
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
++ L L+LSK++ +G G A + + R+F ++ I + +GM+E
Sbjct: 324 SHALADKLVLSKLRALLG-GNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
TVS DD F D +G ++PG + KI DE
Sbjct: 381 TVSCWDDRCFNPDSIGMSMPGAEVKIGAKDE 411
>gi|284163671|ref|YP_003401950.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
gi|284013326|gb|ADB59277.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
Length = 652
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 109/220 (49%), Gaps = 15/220 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR ++ F LG++ V + EW D + AG +YT++SP + L
Sbjct: 73 VRKLSAGFHDLGVDAGDRVGLFANTRMEWAQCDFALLSAGAAVTTVYTSSSPRQVEYLLD 132
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPK--LKAIVQYEGKPDKPGVISWDELMELGRAAPD 328
DA+ VVE+ LE++L+V+ + + +I + +G D+ + + DE+ + G D
Sbjct: 133 DPDADAVVVENAALLERVLEVEDELDLEFVVSIDELDGYDDRDDIYTLDEVYDRGAETFD 192
Query: 329 -ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF---------- 377
E+ ++ L+ + ++ +L+YTSGT G K V L+H N N I + F
Sbjct: 193 LEAYEKRLDAVELDDLASLIYTSGTTGQPKGVQLTHWNFRSNVNAIRKRFARRPDRDDDV 252
Query: 378 -KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L+ +L+ +S+LPL+H+ +T + + + + +A+
Sbjct: 253 PTLDEESLA-MSYLPLAHVFERTAGHFVLFASGSCIAYAE 291
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + Q +DR N + + I++FE +P +F+ L PTMK KR ++++++ +
Sbjct: 587 RVREHVQEEVDRVN-QQFEKHETIKRFELVPQEFTEENDMLTPTMKKKRRVILERFEDRV 645
Query: 481 DKFY 484
D+ Y
Sbjct: 646 DRIY 649
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S V++A+G + + +SG +S EL + + ++ +PI E +G++E A + + PD
Sbjct: 366 LVFSTVREALGGE-IDLLISGGGSLSPELCQLYHAMGLPIFEGYGLTETAPVVSTNPPDA 424
Query: 175 FKLDGVGRTIPGTQTKI 191
K+ +G + ++
Sbjct: 425 TKIGTIGPALSNVDLRV 441
>gi|419420112|ref|ZP_13960341.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes PRP-38]
gi|379978486|gb|EIA11810.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes PRP-38]
Length = 644
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 56 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 115
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + V K+L++IL+ + Q P L+ ++
Sbjct: 116 GVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAGPKELDRILEARDQMPGLETVILINPADQ 175
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 176 VGDHDGLTVLSLEQVRQAGVS---EEIQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 232
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 233 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 265
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 365 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 423
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 424 YKFGTAGRPLVGSQMTTTE-----DGEILYR 449
>gi|261253922|ref|ZP_05946495.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954558|ref|ZP_12597591.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260937313|gb|EEX93302.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815104|gb|EGU50031.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 602
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 5/221 (2%)
Query: 199 NGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYT 258
NG I K++ V +++ A L G+ + I N P+W +D A+ +Y
Sbjct: 34 NG-ISWKQFGQQVDSLSLALLAHGIRVQDKIGIFSNNMPQWTVADFAALQLRAVTVPIYP 92
Query: 259 TNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---VIS 315
TN+ + L +D I V + Q + + + QC +L+ IV + + G I
Sbjct: 93 TNTAAQSAYILQDADVRILFVGEQPQFDAAVSIYDQCEQLELIVAMSDEIELGGFEHAIG 152
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
W + + +A LD L ++ TL+YTSGT G K VML + NI Q
Sbjct: 153 WQQFIANAQAEQQAELDERLSQANFDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQ 212
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L + +S + FLPLSH+ + Y + A + D
Sbjct: 213 RLSLSESDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y+
Sbjct: 547 KELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMYN 596
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y L L+LSK++ +G + G A + + R+F ++ I + +GM+E
Sbjct: 324 SYALADKLVLSKLRALLG-GKINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
TVS DD F D +G ++PG Q KI + +E G + ++ Y AK F + G
Sbjct: 381 TVSCWDDKCFNPDSIGMSMPGAQVKIGENNEILVRGPMVMRGYYKMPEETAKTFDEHGF 439
>gi|123441018|ref|YP_001005007.1| AMP-binding protein [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122087979|emb|CAL10767.1| putative AMP-binding enzyme-family protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 599
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
EG ++ ++ + +V ++ A L LG + I N+ W +DL + G + +
Sbjct: 33 EGENQLTWRQIDTHVTRISAALLSLGAAIQERIGIFANNSMAWSLADLAILQIRGVSVPL 92
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISW 316
Y TN+ + + +D I V Q + + +K CP+L IV + D G
Sbjct: 93 YATNTTAQAAYVVNDADVRILFVGGQAQFDVAITLKPLCPQLSHIVVLDPGVDLRGCEYA 152
Query: 317 DELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
L + + A L +E ++ TL+YTSGT G K VML + N+
Sbjct: 153 QHLADFEQQPDAVQQHLLTARIEGCDLSDLFTLIYTSGTTGEPKGVMLEYRNMAAQLYLH 212
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q L S S +SFLPLSH+ + Y + T A ++ +D N ++
Sbjct: 213 DQRLTLTSDDTS-LSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVR 259
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP F++ TGEL PTMK++R ++++YQ+ ID Y
Sbjct: 549 KELAKFEQVKRFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDSMY 597
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L L+LSK++ +G + R + A + + +F ++ I I +GM+E +
Sbjct: 327 YKLTDRLVLSKLRGVLG-GKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVS 385
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLG 222
DF+ +G+ +PG + ++ +E + G I ++ Y + A++F + G
Sbjct: 386 CWEETDFRFGSIGKPLPGIEVRLGAENEIQVRGPIVMRGYFNKPQETAESFTEDG 440
>gi|422394515|ref|ZP_16474556.1| putative CoA ligase [Propionibacterium acnes HL097PA1]
gi|422437290|ref|ZP_16514137.1| AMP-binding enzyme [Propionibacterium acnes HL092PA1]
gi|422492750|ref|ZP_16569055.1| AMP-binding enzyme [Propionibacterium acnes HL086PA1]
gi|422514961|ref|ZP_16591079.1| AMP-binding enzyme [Propionibacterium acnes HL110PA2]
gi|422523902|ref|ZP_16599913.1| AMP-binding enzyme [Propionibacterium acnes HL053PA2]
gi|422530289|ref|ZP_16606250.1| AMP-binding enzyme [Propionibacterium acnes HL110PA1]
gi|422544310|ref|ZP_16620150.1| AMP-binding enzyme [Propionibacterium acnes HL082PA1]
gi|313794135|gb|EFS42155.1| AMP-binding enzyme [Propionibacterium acnes HL110PA1]
gi|313803257|gb|EFS44453.1| AMP-binding enzyme [Propionibacterium acnes HL110PA2]
gi|313839211|gb|EFS76925.1| AMP-binding enzyme [Propionibacterium acnes HL086PA1]
gi|314964031|gb|EFT08131.1| AMP-binding enzyme [Propionibacterium acnes HL082PA1]
gi|315078278|gb|EFT50317.1| AMP-binding enzyme [Propionibacterium acnes HL053PA2]
gi|327334413|gb|EGE76124.1| putative CoA ligase [Propionibacterium acnes HL097PA1]
gi|327457568|gb|EGF04223.1| AMP-binding enzyme [Propionibacterium acnes HL092PA1]
Length = 646
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + V K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIVTAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQAVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 267
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|350568435|ref|ZP_08936837.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
avidum ATCC 25577]
gi|348661655|gb|EGY78338.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
avidum ATCC 25577]
Length = 644
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
+G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 56 DGQWIIRTYAETGRRVAGLARAFVTPGVLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 115
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + V K+L++IL+ + Q P L+ +V +
Sbjct: 116 GVVPVPIYPTSTPDQIVHIVTDAGIRVIVTAGPKELDRILEARDQMPCLETVVLIDPADR 175
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 176 VGDHDGLTVLSLEQVRQAGVS---EEMQPVVEERMRQSCADDVAALIYTSGTTGEPKGVM 232
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F A S +SFLPLSH
Sbjct: 233 ISHRAALAELQALDAFFDFTPADHS-LSFLPLSH 265
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 102 NVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
+VS +++ L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++
Sbjct: 352 SVSLEARHKVADRLVLKAIRDAVGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLT 410
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
E + + ++P K GR + G++ D +GEI +
Sbjct: 411 EASPLVSFNSPGGCKFGTAGRPLVGSRMSTTD-----DGEILYR 449
>gi|288929842|ref|ZP_06423685.1| long-chain-fatty-acid-CoA ligase [Prevotella sp. oral taxon 317
str. F0108]
gi|288328943|gb|EFC67531.1| long-chain-fatty-acid-CoA ligase [Prevotella sp. oral taxon 317
str. F0108]
Length = 602
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 196 EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
E+G + + V+ V+ A L LG++ ++ + N ++ Y+D GA A
Sbjct: 31 EDGWRTVSWNHFSLRVKQVSNALLNLGVKPQENIAVFSQNCLQYLYTDFGAYGVRAVAIP 90
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK----PDKP 311
Y T+S + + + V + +Q +K +V A C L+ IV ++ P
Sbjct: 91 FYATSSEQQVQFVVNDAQVRFIFVGEQEQYDKAHRVFALCHSLERIVVFDRNVRISTHDP 150
Query: 312 GVISWDELMELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLS----HDNI 366
+ +D+ ++LG P +S L+R N+ C ++YTSGT G SK VML+ H +
Sbjct: 151 NALYFDDFLKLGENLPRQSELERRWRDANENDLCNILYTSGTTGDSKGVMLTYSQYHAAL 210
Query: 367 TFNAACIIQYFKLESAALSVISFLPLSHI 395
N C+ VISFLP +HI
Sbjct: 211 KANDECVPV-----GETDRVISFLPYTHI 234
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 427 QAAIDRAN--LKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q +DR + ++ +S ++I++ +P FS+ GEL T+K++RP ++ Y+ +IDK Y
Sbjct: 541 QMMLDRIHTLVQQLSPYEQIKRITLIPHHFSMENGELTNTLKLRRPVILANYKELIDKMY 600
Query: 485 D 485
+
Sbjct: 601 E 601
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 79 VKRWIANYAKSTSLQHYMAYLEKNVSEP----YTYRLVRWLILSKVKQAMGLDRCRVSLS 134
++R + +A +H + YL + P Y+++ +LS V++ +GL+ + +
Sbjct: 295 LQRRLFKHALEVGRRHNVHYLSRGKRPPLPLRMEYKVLNRTVLSLVRKQLGLENANIFPT 354
Query: 135 GAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVD 193
A +S E++ + ++ + + +G++E + D + L VGR I G Q KI +
Sbjct: 355 AGARVSPEVEEFVHAIGLFMMVGYGLTESLATVSCDRVDKPYTLGSVGRVINGLQIKIGE 414
Query: 194 PDEEGNGEICLK 205
N E+ LK
Sbjct: 415 -----NNEVLLK 421
>gi|420257198|ref|ZP_14759964.1| AMP-binding protein [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404515343|gb|EKA29112.1| AMP-binding protein [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 599
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
EG ++ ++ + +V ++ A L LG + I N+ W +DL + G + +
Sbjct: 33 EGENQLTWRQIDTHVTRISAALLSLGAAIQERIGIFANNSMAWSLADLAILQIPGVSVPL 92
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISW 316
Y TN+ + + +D I V Q + + +K CP+L IV + D G
Sbjct: 93 YATNTTAQAAYVVNDADVRILFVGGQAQFDVAITLKPLCPQLSHIVVLDPGVDLRGCEYA 152
Query: 317 DELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
L + + A L +E ++ TL+YTSGT G K VML + N+
Sbjct: 153 QHLADFEQQPDAVQQHLLTARIEGCDLSDLFTLIYTSGTTGEPKGVMLEYRNMAAQLYLH 212
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q L S S +SFLPLSH+ + Y + T A ++ +D N ++
Sbjct: 213 DQRLTLTSDDTS-LSFLPLSHVFERAWSFYVMHTGAQNVYISDTNWVR 259
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP F++ TGEL PTMK++R ++++YQ+ ID Y
Sbjct: 549 KELAKFEQVKRFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDSMY 597
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L L+LSK++ +G + R + A + + +F ++ I I +GM+E +
Sbjct: 327 YKLADRLVLSKLRGVLG-GKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVS 385
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLG 222
DF+ +G+ +PG + ++ +E + G I ++ Y + A++F + G
Sbjct: 386 CWEETDFRFGSIGKPLPGIEVRLGAENEIQVRGPIVMRGYFNKPQETAESFTEDG 440
>gi|325105263|ref|YP_004274917.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
gi|324974111|gb|ADY53095.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
Length = 592
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
V+K ++LG+++ V I+ N PEW + D G + G MY T + +D
Sbjct: 47 VSKGLIRLGIKKDDKVAIMAENMPEWNFCDFGIMQIGAAQVPMYPTLAENDIKFIFKDAD 106
Query: 274 ANICVVEDD---KQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
+ V + ++L++I + Q K+ + +G P W E++E DES
Sbjct: 107 IKVVFVSSEPLYQKLKRIAEENGQDIKIYTFEKIDGAP------HWTEIIE---THDDES 157
Query: 331 ---LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVI 387
LD I ++ TL+YTSGT G K VML+H N+ N + + +
Sbjct: 158 FIDLDEYRSKITGDDLLTLIYTSGTTGTPKGVMLTHKNLLSNIEASAKLYP--EGVTRAL 215
Query: 388 SFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
SFLPLSHI + V +Y + ++++A+
Sbjct: 216 SFLPLSHIFERMV-VYMYFYLGISVYYAE 243
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 75 QTTGVKRWIANYAKSTSLQHYM-----AYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRC 129
+ TG+K+ + +A + L++ + A+ E + +L R LI K K A+G
Sbjct: 280 ELTGIKKSLFFWALNLGLKYELDGANGAWYELQL------KLARKLIFKKWKDALG-GEI 332
Query: 130 RVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAP--DDFKLDGVGRTIPGT 187
+ +SG A + L R F I + E +G++E + +V+ P + K VG+ +
Sbjct: 333 MLIVSGGAALQERLARVFWGAGIKVLEGYGLTETSPVISVNGPRKGETKFGTVGKPLFNV 392
Query: 188 QTKIVDPDEEGNGEICLK 205
+ KI + +GEI K
Sbjct: 393 EVKIAE-----DGEILCK 405
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + +DR N +K++K LP +F+I GEL P + ++R ++K ++ I
Sbjct: 522 KVIDKIWSEVDRLN-ADFGKWEKVKKIALLPHEFTIDGGELTPKLSLRRKVILKNNEAAI 580
Query: 481 DKFY 484
++ Y
Sbjct: 581 EEIY 584
>gi|295131759|ref|YP_003582422.1| AMP-binding enzyme [Propionibacterium acnes SK137]
gi|291376420|gb|ADE00275.1| AMP-binding enzyme [Propionibacterium acnes SK137]
Length = 644
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 56 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 115
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 116 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 175
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 176 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 232
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 233 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 265
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 365 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLFVCQGYGLTEASPLVSFNSPGG 423
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 424 YKFGTAGRPLVGSQMTTTE-----DGEILYR 449
>gi|41407807|ref|NP_960643.1| FadD11_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396161|gb|AAS04026.1| FadD11_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 606
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 102 NVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
++E Y L+LSKV++ +G+DR R+ ++GAAPI E+ + L L IP+CE +GM+
Sbjct: 313 GLAEKLRYAFADRLVLSKVRRRLGMDRLRIGVTGAAPIPREVHEFVLGLGIPVCEGYGMT 372
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
EC TV+ P+ K+ VG +PGT+ + +GE+ ++
Sbjct: 373 ECTAGATVNRPERIKIGMVGTPVPGTEVTVAS-----DGEVLVR 411
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++Y VR +A LG+ +V ++ N PE+ D ++ G +Y TN
Sbjct: 38 ITWRQYRDRVRAIAAGLAGLGVGNGDTVALMMSNRPEFHLCDTAVLHTGATPFSVYNTNP 97
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
PE + +D ++ + E + ++L Q ++ +V +G + G I D+L
Sbjct: 98 PELLAYQFDNADNHVVICE-GTFMPQVLAAAQQGGTVEHVVCVDGAAN--GAIGLDQL-- 152
Query: 322 LGRAAPDESLD--RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
A+P D R + ++ T+VYTSGT G K V L+H N NA + +
Sbjct: 153 --EASPAAGFDFERSWRAVGPDDVLTIVYTSGTTGPPKGVELTHTNFIENARITEEVGGI 210
Query: 380 ESAALSVISFLPLSHIAAQTVDIY 403
A +V S+LP +H A + + Y
Sbjct: 211 THADRAV-SYLPDAHAANRWITHY 233
>gi|448320502|ref|ZP_21509989.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445605967|gb|ELY59882.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 661
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 17/249 (6%)
Query: 182 RTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
R++ + ++ DPD I + VR +A F LG+E+ V I EW
Sbjct: 46 RSLTESVLELADPD--AFRAISYTQMRNVVRNLAAGFRDLGVEQGDRVGIFADTRMEWAQ 103
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
+D + AG +Y ++SP+ + L DA VVE+++ +E++L+V+ L+ I
Sbjct: 104 TDFALLSAGAVITTVYESSSPDQVRYLLDDPDATAVVVENERLVERVLEVEDDL-DLEFI 162
Query: 302 V---QYEGKPDKPGVISWDELMELGRAAPD-ESLDRVLETIATNECCTLVYTSGTEGASK 357
V + EG D+ V++ E+ + G D E + L+ ++ +L+YTSGT G K
Sbjct: 163 VSMDRLEGYDDRNDVLTLAEVHDRGEDVFDLERYEEWLDAPEMDDLASLIYTSGTTGQPK 222
Query: 358 PVMLSHDNITFNAACIIQYF----------KLESAALSVISFLPLSHIAAQTVDIYSVMT 407
V L+H N N + + + + + +S+LPL+H+ +T + +
Sbjct: 223 GVQLTHRNFRSNVNQVRKRYGPRPDKDDELPVIDETVQSVSYLPLAHVFERTSGHFLLFA 282
Query: 408 VAATLWFAD 416
A + +A+
Sbjct: 283 SGACVAYAE 291
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 67 WKKVTYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPY---TYRLVRWLILSKVKQA 123
+ + + +G K+ I +A ++ Y E + P L L+ S V++A
Sbjct: 319 YDTIREQASESGAKKRIFEWATDVGVE----YQESDDPGPILSAKQSLADKLVFSNVREA 374
Query: 124 MGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRT 183
+G + + +SG +S EL + ++ +PI E +G++E A +V+ P+ ++ +G
Sbjct: 375 LGGE-IELLISGGGSLSKELCTLYHAMGLPIYEGYGLTETAPVVSVNPPEAPEIGTIGPP 433
Query: 184 IPGTQTKIVDPDEEG 198
+PG +I D EG
Sbjct: 434 LPGVDVRIDDSLVEG 448
>gi|354605777|ref|ZP_09023752.1| hypothetical protein HMPREF1003_00319 [Propionibacterium sp.
5_U_42AFAA]
gi|353558433|gb|EHC27797.1| hypothetical protein HMPREF1003_00319 [Propionibacterium sp.
5_U_42AFAA]
Length = 644
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 56 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 115
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 116 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 175
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 176 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 232
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 233 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 265
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 365 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 423
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 424 YKFGTAGRPLVGSQMTTTE-----DGEILYR 449
>gi|407936792|ref|YP_006852433.1| long-chain-fatty-acid--CoA ligase [Acidovorax sp. KKS102]
gi|407894586|gb|AFU43795.1| long-chain-fatty-acid--CoA ligase [Acidovorax sp. KKS102]
Length = 599
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 9/204 (4%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
LGL V +I N EW + +GA G G+Y T+ + + +D I V E
Sbjct: 55 LGLPAGGHVGVISENRIEWVLAQMGAGLVGAVTVGVYPTSPTNEVAYVVGHADIEIMVCE 114
Query: 281 DDKQLEKILKVKAQCPKLKAIVQYEGK------PD-KPGVISWDELMELGRAAPDES-LD 332
D +Q +K+L + P+LK IV E K P+ + + ++DE+ +LG A+ ++ +D
Sbjct: 115 DQEQTDKLLAALPELPRLKKIVVMETKGLRSFAPEVRQFITTFDEVEQLGAASGQQAVID 174
Query: 333 RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPL 392
L ++ ++YTSG+ G K M+S+ NI I+ +L S + +S+LPL
Sbjct: 175 DALARQRLDDVGLMIYTSGSTGKPKGAMISYRNIRGVVPGIVDRLEL-SQGTTHLSYLPL 233
Query: 393 SHIAAQTVDIYSVMTVAATLWFAD 416
H+A Q + + + + + + F +
Sbjct: 234 CHVAEQMLTSFVPVYIGSQVNFGE 257
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 102 NVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMS 161
+ ++ TY WL+ ++ +GL V+L+GAAPI ++ R+F L +P+ EV+G++
Sbjct: 322 SAADKLTYAASYWLVFRALQNFIGLRNAHVALTGAAPIPPDVVRFFRVLGVPLIEVYGLT 381
Query: 162 ECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEY----EANVRTVAK 216
E G T D + VG G + +I D E + G++ Y EA ++
Sbjct: 382 ESTGMVTGHRLDHVVVGTVGVPTLGVEHRIADNGELQIQGDMVFAGYYKNPEATASSIVD 441
Query: 217 AFLKLG 222
+L G
Sbjct: 442 GWLHTG 447
>gi|422536534|ref|ZP_16612441.1| AMP-binding enzyme [Propionibacterium acnes HL078PA1]
gi|315081416|gb|EFT53392.1| AMP-binding enzyme [Propionibacterium acnes HL078PA1]
gi|456739309|gb|EMF63876.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes FZ1/2/0]
Length = 646
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 267
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|422386656|ref|ZP_16466773.1| AMP-binding family protein [Propionibacterium acnes HL096PA2]
gi|422391630|ref|ZP_16471710.1| AMP-binding family protein [Propionibacterium acnes HL099PA1]
gi|422423836|ref|ZP_16500787.1| AMP-binding enzyme [Propionibacterium acnes HL043PA1]
gi|422461080|ref|ZP_16537714.1| AMP-binding enzyme [Propionibacterium acnes HL038PA1]
gi|422476097|ref|ZP_16552536.1| AMP-binding enzyme [Propionibacterium acnes HL007PA1]
gi|422484550|ref|ZP_16560927.1| AMP-binding enzyme [Propionibacterium acnes HL043PA2]
gi|422519280|ref|ZP_16595342.1| AMP-binding enzyme [Propionibacterium acnes HL074PA1]
gi|422520156|ref|ZP_16596198.1| AMP-binding enzyme [Propionibacterium acnes HL045PA1]
gi|422525234|ref|ZP_16601236.1| AMP-binding enzyme [Propionibacterium acnes HL083PA1]
gi|422527685|ref|ZP_16603672.1| AMP-binding enzyme [Propionibacterium acnes HL053PA1]
gi|422558837|ref|ZP_16634570.1| AMP-binding enzyme [Propionibacterium acnes HL005PA1]
gi|313771576|gb|EFS37542.1| AMP-binding enzyme [Propionibacterium acnes HL074PA1]
gi|313811973|gb|EFS49687.1| AMP-binding enzyme [Propionibacterium acnes HL083PA1]
gi|313832408|gb|EFS70122.1| AMP-binding enzyme [Propionibacterium acnes HL007PA1]
gi|314975073|gb|EFT19168.1| AMP-binding enzyme [Propionibacterium acnes HL053PA1]
gi|314977483|gb|EFT21578.1| AMP-binding enzyme [Propionibacterium acnes HL045PA1]
gi|314985862|gb|EFT29954.1| AMP-binding enzyme [Propionibacterium acnes HL005PA1]
gi|315096886|gb|EFT68862.1| AMP-binding enzyme [Propionibacterium acnes HL038PA1]
gi|327333002|gb|EGE74734.1| AMP-binding family protein [Propionibacterium acnes HL096PA2]
gi|327448709|gb|EGE95363.1| AMP-binding enzyme [Propionibacterium acnes HL043PA1]
gi|327449097|gb|EGE95751.1| AMP-binding enzyme [Propionibacterium acnes HL043PA2]
gi|328762201|gb|EGF75697.1| AMP-binding family protein [Propionibacterium acnes HL099PA1]
Length = 646
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 267
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLFVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|335055097|ref|ZP_08547887.1| AMP-binding enzyme [Propionibacterium sp. 434-HC2]
gi|365963859|ref|YP_004945425.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365966099|ref|YP_004947664.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|387504596|ref|YP_005945825.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes 6609]
gi|407936605|ref|YP_006852247.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes C1]
gi|422383826|ref|ZP_16463967.1| AMP-binding family protein [Propionibacterium acnes HL096PA3]
gi|422426562|ref|ZP_16503482.1| AMP-binding enzyme [Propionibacterium acnes HL087PA1]
gi|422431738|ref|ZP_16508609.1| AMP-binding enzyme [Propionibacterium acnes HL059PA2]
gi|422434480|ref|ZP_16511338.1| AMP-binding enzyme [Propionibacterium acnes HL083PA2]
gi|422442966|ref|ZP_16519767.1| AMP-binding enzyme [Propionibacterium acnes HL002PA1]
gi|422445214|ref|ZP_16521967.1| AMP-binding enzyme [Propionibacterium acnes HL027PA1]
gi|422448125|ref|ZP_16524857.1| AMP-binding enzyme [Propionibacterium acnes HL036PA3]
gi|422449813|ref|ZP_16526534.1| AMP-binding enzyme [Propionibacterium acnes HL030PA2]
gi|422452652|ref|ZP_16529349.1| AMP-binding enzyme [Propionibacterium acnes HL087PA3]
gi|422455623|ref|ZP_16532293.1| AMP-binding enzyme [Propionibacterium acnes HL030PA1]
gi|422479039|ref|ZP_16555450.1| AMP-binding enzyme [Propionibacterium acnes HL063PA1]
gi|422482169|ref|ZP_16558568.1| AMP-binding enzyme [Propionibacterium acnes HL036PA1]
gi|422489693|ref|ZP_16566020.1| AMP-binding enzyme [Propionibacterium acnes HL020PA1]
gi|422496633|ref|ZP_16572915.1| AMP-binding enzyme [Propionibacterium acnes HL002PA3]
gi|422499723|ref|ZP_16575981.1| AMP-binding enzyme [Propionibacterium acnes HL063PA2]
gi|422501800|ref|ZP_16578049.1| AMP-binding enzyme [Propionibacterium acnes HL027PA2]
gi|422505286|ref|ZP_16581517.1| AMP-binding enzyme [Propionibacterium acnes HL036PA2]
gi|422507577|ref|ZP_16583759.1| AMP-binding enzyme [Propionibacterium acnes HL046PA2]
gi|422509591|ref|ZP_16585747.1| AMP-binding enzyme [Propionibacterium acnes HL059PA1]
gi|422512267|ref|ZP_16588400.1| AMP-binding enzyme [Propionibacterium acnes HL087PA2]
gi|422538955|ref|ZP_16614829.1| AMP-binding enzyme [Propionibacterium acnes HL013PA1]
gi|422541835|ref|ZP_16617691.1| AMP-binding enzyme [Propionibacterium acnes HL037PA1]
gi|422546754|ref|ZP_16622578.1| AMP-binding enzyme [Propionibacterium acnes HL050PA3]
gi|422552786|ref|ZP_16628574.1| AMP-binding enzyme [Propionibacterium acnes HL005PA3]
gi|422556133|ref|ZP_16631892.1| AMP-binding enzyme [Propionibacterium acnes HL005PA2]
gi|422556623|ref|ZP_16632375.1| AMP-binding enzyme [Propionibacterium acnes HL025PA2]
gi|422561513|ref|ZP_16637198.1| AMP-binding enzyme [Propionibacterium acnes HL046PA1]
gi|422567888|ref|ZP_16643513.1| AMP-binding enzyme [Propionibacterium acnes HL002PA2]
gi|422569205|ref|ZP_16644820.1| AMP-binding enzyme [Propionibacterium acnes HL067PA1]
gi|422577342|ref|ZP_16652876.1| AMP-binding enzyme [Propionibacterium acnes HL005PA4]
gi|313765156|gb|EFS36520.1| AMP-binding enzyme [Propionibacterium acnes HL013PA1]
gi|313808590|gb|EFS47050.1| AMP-binding enzyme [Propionibacterium acnes HL087PA2]
gi|313817120|gb|EFS54834.1| AMP-binding enzyme [Propionibacterium acnes HL059PA1]
gi|313819065|gb|EFS56779.1| AMP-binding enzyme [Propionibacterium acnes HL046PA2]
gi|313821657|gb|EFS59371.1| AMP-binding enzyme [Propionibacterium acnes HL036PA1]
gi|313823792|gb|EFS61506.1| AMP-binding enzyme [Propionibacterium acnes HL036PA2]
gi|313826896|gb|EFS64610.1| AMP-binding enzyme [Propionibacterium acnes HL063PA1]
gi|313829267|gb|EFS66981.1| AMP-binding enzyme [Propionibacterium acnes HL063PA2]
gi|314916839|gb|EFS80670.1| AMP-binding enzyme [Propionibacterium acnes HL005PA4]
gi|314921153|gb|EFS84984.1| AMP-binding enzyme [Propionibacterium acnes HL050PA3]
gi|314926132|gb|EFS89963.1| AMP-binding enzyme [Propionibacterium acnes HL036PA3]
gi|314932500|gb|EFS96331.1| AMP-binding enzyme [Propionibacterium acnes HL067PA1]
gi|314956271|gb|EFT00643.1| AMP-binding enzyme [Propionibacterium acnes HL027PA1]
gi|314958768|gb|EFT02870.1| AMP-binding enzyme [Propionibacterium acnes HL002PA1]
gi|314960972|gb|EFT05073.1| AMP-binding enzyme [Propionibacterium acnes HL002PA2]
gi|314968795|gb|EFT12893.1| AMP-binding enzyme [Propionibacterium acnes HL037PA1]
gi|314985948|gb|EFT30040.1| AMP-binding enzyme [Propionibacterium acnes HL005PA2]
gi|314989257|gb|EFT33348.1| AMP-binding enzyme [Propionibacterium acnes HL005PA3]
gi|315084943|gb|EFT56919.1| AMP-binding enzyme [Propionibacterium acnes HL027PA2]
gi|315087473|gb|EFT59449.1| AMP-binding enzyme [Propionibacterium acnes HL002PA3]
gi|315100054|gb|EFT72030.1| AMP-binding enzyme [Propionibacterium acnes HL059PA2]
gi|315102786|gb|EFT74762.1| AMP-binding enzyme [Propionibacterium acnes HL046PA1]
gi|315107340|gb|EFT79316.1| AMP-binding enzyme [Propionibacterium acnes HL030PA1]
gi|315110512|gb|EFT82488.1| AMP-binding enzyme [Propionibacterium acnes HL030PA2]
gi|327333995|gb|EGE75710.1| AMP-binding family protein [Propionibacterium acnes HL096PA3]
gi|327455527|gb|EGF02182.1| AMP-binding enzyme [Propionibacterium acnes HL087PA3]
gi|327456182|gb|EGF02837.1| AMP-binding enzyme [Propionibacterium acnes HL083PA2]
gi|328756809|gb|EGF70425.1| AMP-binding enzyme [Propionibacterium acnes HL087PA1]
gi|328757697|gb|EGF71313.1| AMP-binding enzyme [Propionibacterium acnes HL020PA1]
gi|328759092|gb|EGF72708.1| AMP-binding enzyme [Propionibacterium acnes HL025PA2]
gi|333762704|gb|EGL40190.1| AMP-binding enzyme [Propionibacterium sp. 434-HC2]
gi|335278641|gb|AEH30546.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes 6609]
gi|365740540|gb|AEW84742.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365742780|gb|AEW82474.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|407905186|gb|AFU42016.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes C1]
Length = 646
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 267
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|294634995|ref|ZP_06713512.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
gi|291091594|gb|EFE24155.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
Length = 603
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E A V +A+A L G+E V I N+ W +DL ++ +Y TN+
Sbjct: 44 REVGAQVSRLARALLAWGVEVQERVAIFAHNSVAWSLADLAILHLRAVTVPIYATNTASQ 103
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L + I V+ Q + +L +++ CP+L+ I+ D G L EL
Sbjct: 104 AAYILNDASVRILFVDGQAQYDAVLALRSDCPQLRHIIVLTRDVDLRGCEIACHLDELAH 163
Query: 325 AAPD---ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
A + E L + + ++ TL+YTSGT G K VML + N+ A + +L
Sbjct: 164 AEHEIYAEPLAQRIAEATLDDLFTLIYTSGTTGEPKGVMLDYRNLA--AQLYLHDARLNV 221
Query: 382 AALSV-ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQA 428
+ V + FLPLSH+ + Y + + A ++ D N ++ +A QA
Sbjct: 222 SDQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVR--EAMQA 267
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L K++ +G R R + A + ++ +F +L + I +GM+E + D
Sbjct: 336 LVLGKLRDILG-GRVRFLPAAGAKLDDQVILFFQALGLNIKYGYGMTETCATVSCWEEHD 394
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAF 218
F+ +GR +PG + +I + +E + G I ++ Y + A++F
Sbjct: 395 FRFGSIGRPLPGIEVRIAEENEIQVRGPIVMRGYFNKPQETAQSF 439
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP FS+ GEL PT+K++R ++ +Y I+ Y
Sbjct: 552 KELAKFEQVKRFTLLPQAFSMELGELTPTLKLRRKIILSRYHQEIESMY 600
>gi|50843669|ref|YP_056896.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes KPA171202]
gi|289425916|ref|ZP_06427668.1| AMP-binding enzyme [Propionibacterium acnes SK187]
gi|289428166|ref|ZP_06429865.1| AMP-binding enzyme [Propionibacterium acnes J165]
gi|365975037|ref|YP_004956596.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn33]
gi|386025164|ref|YP_005943470.1| putative long-chain-fatty-acid--CoA ligase [Propionibacterium acnes
266]
gi|50841271|gb|AAT83938.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes KPA171202]
gi|289153692|gb|EFD02401.1| AMP-binding enzyme [Propionibacterium acnes SK187]
gi|289158646|gb|EFD06850.1| AMP-binding enzyme [Propionibacterium acnes J165]
gi|332676623|gb|AEE73439.1| putative long-chain-fatty-acid--CoA ligase [Propionibacterium acnes
266]
gi|365745036|gb|AEW80233.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn33]
Length = 644
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 56 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 115
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 116 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 175
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 176 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 232
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 233 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 265
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 365 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 423
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 424 YKFGTAGRPLVGSQMTTTE-----DGEILYR 449
>gi|408532508|emb|CCK30682.1| Long-chain-fatty-acid--CoA ligase FadD15 [Streptomyces davawensis
JCM 4913]
Length = 598
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ + A VR AK + G++ + ++ EW D AG +Y T+
Sbjct: 45 DVTATAFLAEVRAAAKGLIAAGVQPGDRIGLMSRTRYEWTLLDFAIWSAGAITVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L L S A+ + E D + V+ + P LK + Q EG + +EL
Sbjct: 105 SPEQVLWILGDSGASAVLTELDTHTAAVESVRDRLPALKHLWQIEGG-------ALEELG 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
LG+ D++++ ++ T+VYTSGT G K +L+H N I++ +
Sbjct: 158 RLGQDVSDQTVEERSSLAKADDPATIVYTSGTTGRPKGCVLTHRNFFAECGNIVERLRPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDI 402
+ SV+ FLPL+H+ + V I
Sbjct: 218 FRTGECSVLLFLPLAHVFGRLVQI 241
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ +G R ++SG AP+ L +F + + E +G++E A T + D
Sbjct: 332 LVYSKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTETCAATTFNPWDR 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ +PG+ +I D E +GE +EY N +A
Sbjct: 391 QKIGTVGQPLPGSVVRIADDGEVLLHGEHIFREYWNNPGATEEAL--------------- 435
Query: 234 FNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVK 292
A WF+S D+G + G+ + T + L + V+ED +++
Sbjct: 436 --ADGWFHSGDIGTLDEDGY---LRITGRKKEILVTAGGKNVAPAVIED--------RIR 482
Query: 293 AQCPKLKAIVQYEGKPDKPGVISWDELMELGRAAPDES 330
A + +V +G+P +++ DE LGR A +
Sbjct: 483 AHALVAECMVVGDGRPFVGALVTIDEEF-LGRWAAEHG 519
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A Q+AID N ++S A+ ++KF L + F+ +G L P++K+KR V K + I+ Y
Sbjct: 538 AIQSAIDDGN-AAVSKAESVRKFRILSSQFTEESGHLTPSLKLKRNVVAKDFAQEIEAIY 596
>gi|417930836|ref|ZP_12574210.1| AMP-binding enzyme [Propionibacterium acnes SK182]
gi|340769741|gb|EGR92263.1| AMP-binding enzyme [Propionibacterium acnes SK182]
Length = 644
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 56 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 115
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 116 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 175
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 176 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 232
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 233 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 265
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 365 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLFVCQGYGLTEASPLVSFNSPGG 423
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 424 YKFGTAGRPLVGSQMTTTE-----DGEILYR 449
>gi|120435404|ref|YP_861090.1| long-chain-fatty-acid--CoA ligase [Gramella forsetii KT0803]
gi|117577554|emb|CAL66023.1| long-chain-fatty-acid--CoA ligase [Gramella forsetii KT0803]
Length = 593
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF-NAPEWFYSDLGAIYAGGFAAGMYTTN 260
I ++Y T+++ L+LG++ + +I N EW D+G + G +Y T
Sbjct: 35 ISTQQYIDQANTISRGLLRLGVKPNDKIAVISTSNRTEWNVMDIGILQIGAQNVPVYPTI 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S + + L S A C V D++ L K+ +K +LK + ++ G +W E++
Sbjct: 95 SEDDYEYILNHSGATYCFVSDEEVLGKVNSIKGTT-ELKEVYSFD---QIAGCQNWKEIL 150
Query: 321 ELGR-AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+ G + ++++ + + ++ T++YTSGT G K VML+H+NI +
Sbjct: 151 KSGEDKGNQDEVEKLKKAVKPDDLATIIYTSGTTGRPKGVMLTHNNIVSDVLGSAPRVPF 210
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
E+ +SFLP+ HI + + +Y + +++FA+
Sbjct: 211 ETGTYVALSFLPVCHIFERMI-LYLYQYYSVSIYFAE 246
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 110 RLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV 169
+L R LI SK K+ +G + +SG+A + L R F + +IP+ E +G++E + +V
Sbjct: 317 KLARKLIFSKWKEGLG-GNIELIVSGSAALQPRLTRVFAAAEIPVMEGYGLTETSPVISV 375
Query: 170 SAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ + F++ VG+ + + KI + +GEI K
Sbjct: 376 NDERNHGFRIGTVGKVLQNVKVKIAE-----DGEILTK 408
>gi|422486485|ref|ZP_16562831.1| AMP-binding enzyme [Propionibacterium acnes HL013PA2]
gi|327450368|gb|EGE97022.1| AMP-binding enzyme [Propionibacterium acnes HL013PA2]
Length = 646
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 267
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|317508247|ref|ZP_07965927.1| AMP-binding enzyme [Segniliparus rugosus ATCC BAA-974]
gi|316253422|gb|EFV12812.1| AMP-binding enzyme [Segniliparus rugosus ATCC BAA-974]
Length = 599
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ KE+ VR VAK + G+E+ + I EW D AG +Y T+
Sbjct: 45 QVSAKEFYEQVREVAKGLVASGIEQGDRIAICAPTRYEWTLLDFAVWAAGAVTTSVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S+A + VV+D+K L+ P L+ + + G G I +EL
Sbjct: 105 SSEQVRWILSDSEAKLFVVDDEKLLKAHQATLESIPTLRETLTFNG---ASGAI--EELA 159
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI---IQYF 377
G PD L+ + ++ TL+YTSGT G K V L+H N I+
Sbjct: 160 RRGADVPDSELEARRAQLKADDLATLIYTSGTTGRPKGVCLTHRNFLSEVIATQEPIKAM 219
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSV 405
++ S FLPL+HI A+ + I S+
Sbjct: 220 APKAGPASTAMFLPLAHIFARALTITSM 247
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q A+D +N K +S A+ I+KF LP DFSI G L PT+K+KR V K Y S I+ Y
Sbjct: 542 QKAVDNSN-KQVSQAEAIKKFAVLPEDFSIEGGTLTPTLKIKRDVVAKTYTSEIEALY 598
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++QA+G + ++SG A IS +L +F + I I + +G++E T ++P+
Sbjct: 334 LLYGKLRQAVG-GKLVAAVSGGAAISPKLLHFFSGVGINIYQGYGLTESTAGITFNSPEA 392
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ + G + +I D E G + EY N K ++ G
Sbjct: 393 NKIGSVGKLVAGCRARIADDGEILLAGPVVFGEYWRNAEAT-KGAIEDG----------- 440
Query: 234 FNAPEWFY-SDLGAIYAGGF 252
WF+ DLG I GF
Sbjct: 441 -----WFHCGDLGQIDGDGF 455
>gi|451965692|ref|ZP_21918949.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
gi|451315494|dbj|GAC64311.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
Length = 600
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
+E A V +A+A L G+E V I N+ W +DL ++ +Y TN+
Sbjct: 41 REVGAQVSRLARALLAWGVEVQERVAIFAHNSVAWSLADLAILHLRAVTVPIYATNTASQ 100
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ L + I V+ Q + +L +++ CP+L+ I+ D G L EL
Sbjct: 101 AAYILNDASVRILFVDGQAQYDAVLALRSDCPQLRHIIVLTRDVDLRGCEIACHLDELAH 160
Query: 325 AAPD---ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLES 381
A + E L + + ++ TL+YTSGT G K VML + N+ A + +L
Sbjct: 161 AEHEIYAEPLAQRIAEATLDDLFTLIYTSGTTGEPKGVMLDYRNLA--AQLYLHDARLNV 218
Query: 382 AALSV-ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQA 428
+ V + FLPLSH+ + Y + + A ++ D N ++ +A QA
Sbjct: 219 SDQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVR--EAMQA 264
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L K++ +G R R + A + ++ +F +L + I +GM+E + D
Sbjct: 333 LVLGKLRDILG-GRVRFLPAAGAKLDDQVILFFQALGLNIKYGYGMTETCATVSCWEEHD 391
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAF 218
F+ +GR +PG + +I + +E + G I ++ Y + A++F
Sbjct: 392 FRFGSIGRPLPGIEVRIAEENEIQVRGPIVMRGYFNKPQETAQSF 436
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP FS+ GEL PT+K++R ++ +Y I+ Y
Sbjct: 549 KELAKFEQVKRFTLLPQAFSMELGELTPTLKLRRKIILSRYHQEIESMY 597
>gi|422430433|ref|ZP_16507314.1| AMP-binding enzyme [Propionibacterium acnes HL072PA2]
gi|422533384|ref|ZP_16609322.1| AMP-binding enzyme [Propionibacterium acnes HL072PA1]
gi|314979072|gb|EFT23166.1| AMP-binding enzyme [Propionibacterium acnes HL072PA2]
gi|315089618|gb|EFT61594.1| AMP-binding enzyme [Propionibacterium acnes HL072PA1]
Length = 646
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 267
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|421734268|ref|ZP_16173348.1| long-chain-fatty-acid--CoA ligase, partial [Bifidobacterium bifidum
LMG 13195]
gi|407077841|gb|EKE50667.1| long-chain-fatty-acid--CoA ligase, partial [Bifidobacterium bifidum
LMG 13195]
Length = 409
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 9/199 (4%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
E A++R+VAK L GL++ V + + W +D + GG A +Y T+S E
Sbjct: 104 NETLADIRSVAKGLLHYGLKKGDGVAFMCRTSYAWDVTDAAVMACGGVLATIYDTDSAEQ 163
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SDA + +V +K +CP L+ I+ E +E+ G
Sbjct: 164 IRNIVNNSDARLLIVGTADMRDKAEGAIEECPSLETILCIE-------TGGLEEIKAYGT 216
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
A DE LD +++I + C++VYTSG+ A K V ++H++ A + Y L +
Sbjct: 217 AVSDEELDERIDSIKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYMPDLLHNK 276
Query: 383 ALSVISFLPLSHIAAQTVD 401
SV+ FLP +H A+ ++
Sbjct: 277 KNSVLLFLPQAHSFARAIN 295
>gi|422474360|ref|ZP_16550827.1| AMP-binding enzyme [Propionibacterium acnes HL056PA1]
gi|313834161|gb|EFS71875.1| AMP-binding enzyme [Propionibacterium acnes HL056PA1]
Length = 646
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTPADPS-LSFLPLSH 267
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLFVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|408794555|ref|ZP_11206160.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461790|gb|EKJ85520.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 644
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 14/237 (5%)
Query: 186 GTQTKIVDPDEEGNGE-ICLKE-YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSD 243
G + V DE + + + KE Y+ + +A+A + LG+ +V ++ N EW SD
Sbjct: 17 GNRPAFVSKDESKSYQPVTFKEVYDLGI-NLAEALIDLGVAAKENVALLADNRLEWIVSD 75
Query: 244 LGAIYAGG--FAAGMYTTNSPEACL--HCLVTSDANICVVEDDKQLEKILKVKAQCPKLK 299
G + AG G T+S A + HC +A + +E+DK LEK K ++Q K
Sbjct: 76 YGILMAGAADVPRGTDITDSEIAYILNHC----EAKVIFLENDKMLEKFQKNRSQLEFAK 131
Query: 300 AIVQYEGKPDKPGVISWDELMELG---RAAPDESLDRVLETIATNECCTLVYTSGTEGAS 356
++ + K GV+ +L+E G RA + + ++ IA ++ T++YTSGT G
Sbjct: 132 TLIVMDKKSTATGVLKLYDLIEKGKELRAKGSKKAEERMKAIAPDDLFTIIYTSGTTGMP 191
Query: 357 KPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
K VML H N+ + I+ ++S LP+ H+ + + ++ AT +
Sbjct: 192 KGVMLKHSNMIHQTSVILGSMIEIKQDERMLSILPVWHVFERVFEYLAIAAGCATYY 248
>gi|416087136|ref|ZP_11587609.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|444349745|ref|ZP_21157096.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
gi|348009732|gb|EGY49847.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|443543974|gb|ELT54066.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
Length = 308
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E + V ++ A L ++ + I N P W +D+G + +Y TN
Sbjct: 34 DISWAELQQQVDHISLALLANHIDIQDKIGIFAHNMPRWTITDIGILQVRAVTVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + + +D I D +Q ++++ + +CPKL IV + + W
Sbjct: 94 TAKQAQFIINNADMKIIFAGDQEQYDQVIDIADECPKLIKIVAMKSTINLHEHAKACHWQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +E+ L + L+ + + TL+YTSGT G K VML + N+ Q
Sbjct: 154 DFIEMADEQYRPQLQQRLDGKSLADLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQAL 213
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
+++ + +S +SFLPLSHI + Y + A + D N ++
Sbjct: 214 QIDDSDVS-LSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVR 256
>gi|229846920|ref|ZP_04467026.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
gi|229810004|gb|EEP45724.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
Length = 599
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L ++ + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIDVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD-KPGVIS--WD 317
+ + L +D I V D +Q ++ L++ CPKL+ IV + + V+S W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCPKLQKIVAMKSTIQLQQDVLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+E G L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 NFIETGSNIQQNELTQRLNQKQLSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + + D N ++ +
Sbjct: 205 QLETHDLSLNVTDQDISLSFLPFSHIFERAWAAYILHRGTILCYLEDTNQVRSALTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRTNNKVIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 594
>gi|384500778|gb|EIE91269.1| hypothetical protein RO3G_15980 [Rhizopus delemar RA 99-880]
Length = 779
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 18/196 (9%)
Query: 212 RTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVT 271
+T+ +LGL + + I + EW + GA Y T PE H +
Sbjct: 212 KTIGAGLRQLGLYKGDKIQISASTSSEWMFLAHGAFSQAMTIVTAYDTLGPEGLQHAISE 271
Query: 272 SDANICVVEDDKQLEKILKVKAQCPKLKAIV-QYEGKPDK----------PGVISWDELM 320
S+A +C + D QL + KV + CP +K+I+ + E P+ V+S+DEL+
Sbjct: 272 SEATLCFMNSD-QLPVLNKVLSGCPSVKSIIYRGEANPEHIHKLKSSLQINHVLSFDELL 330
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-L 379
+LG P +D V T ++E C ++YTSG+ G+ K VML+H N+ A + + + L
Sbjct: 331 KLGEEHP---VDVVKPT--SSELCCIMYTSGSTGSPKGVMLTHGNVVSAIAGVSRMLQHL 385
Query: 380 ESAALSVISFLPLSHI 395
A +++++LPL+H+
Sbjct: 386 LEANDTMMAYLPLAHV 401
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDI-PICEVFGMSECAGAHTVSAPDD 174
I VK+ +G + R LSG AP+S E + FLSL + PI +GM+E A + AP+
Sbjct: 498 IFKTVKKQLG-GKLRYCLSGGAPLSAETQD-FLSLTVCPILAGYGMTESMCA--IMAPEQ 553
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEG 198
+ L VG +P + K+VD E G
Sbjct: 554 WALKEVGAPVPCVEVKLVDQPELG 577
>gi|148977488|ref|ZP_01814077.1| long-chain acyl-CoA synthetase [Vibrionales bacterium SWAT-3]
gi|145963283|gb|EDK28549.1| long-chain acyl-CoA synthetase [Vibrionales bacterium SWAT-3]
Length = 602
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ + T++ A L GL + I N P+W +D A+ A +Y TN+
Sbjct: 36 ISWQQFGEQIDTLSLALLAQGLRVQDKIGIYSNNMPQWTVADFAALQARLVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---VISWDE 318
+ + +D I V + Q + + + +C +L+ +V D G +SW++
Sbjct: 96 AAQSSYIIQNADVKILFVGEQAQFDAAVSLFEECEQLEVVVAMSDDIDLQGHNFAVSWND 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
M G + D L ++ TL+YTSGT G K VML + N+ + +
Sbjct: 156 FMARGVESQQAEFDTRLADANMDDLLTLIYTSGTTGQPKGVMLDYTNVGYQLEGHDERLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LTKDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y
Sbjct: 547 QELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMY 595
>gi|384100701|ref|ZP_10001759.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383841935|gb|EID81211.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 616
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ E VR +A + LG++ V + EW +DL + AG +Y T +
Sbjct: 54 VTWSEAGDRVRNLAAGLIVLGVQAEQRVALASATRYEWVLADLAVMCAGAATTTVYPTTT 113
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-DKPGVISWDELM 320
+ + S + I ED QL K+ + +++ ++ +V +G P D VI++D+L
Sbjct: 114 AGDVAYIVANSGSRIVFAEDHAQLAKLREERSELGAVEKVVLIDGDPGDDDWVITFDQLH 173
Query: 321 ELGR----AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
+LG PD DR+ E I ++ TL+YTSGT G K V LSH T+ AA I
Sbjct: 174 DLGEELLAETPDAVHDRI-EAIGPDDLATLIYTSGTTGRPKGVRLSHSAWTYVAAAIDAT 232
Query: 377 FKLESAALSVISFLPLSHI 395
L++ L + +LPLSH+
Sbjct: 233 GILDADDLQYL-WLPLSHV 250
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S +++ G R + +SG+A ++ ++ ++F ++ I + E +G+SE + A V+ P
Sbjct: 350 LVYSTIRERFG-GRLKFFISGSAALNRDVAQWFDAVGIVVLEGYGLSETSAASFVNRPSA 408
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK------EYEANVRTVAKAFLKLGLER 225
++ VG IPGT+T+I D +GEI +K Y N A+A G R
Sbjct: 409 YRFGTVGWAIPGTETRIGD-----DGEILIKGPGVMSGYHENPEATAEALTDDGWFR 460
>gi|291440135|ref|ZP_06579525.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291343030|gb|EFE69986.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 598
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ + A VR AK + G+ V ++ EW D AG +Y T+
Sbjct: 45 DVTATTFLAEVRAAAKGLIASGVRPGDRVALMSRTRYEWTLLDFAIWSAGAVTVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
SPE L S A CVVE D + V+ + P L+ + Q D GV +EL
Sbjct: 105 SPEQVAWILGDSGATACVVELDVHAAAVESVRDRLPALENVWQI----DAGGV---EELG 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
LGR DE+++ ++ T+VYTSGT G K +L+H + I++ +
Sbjct: 158 RLGRDVTDETVEERSSVAKADDPATIVYTSGTTGRPKGCVLTHRSFFAECGNIVERLRPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDI 402
+ SV+ FLPL+H+ + V +
Sbjct: 218 FRTGECSVLLFLPLAHVFGRLVQV 241
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+++ L+ K++ +G R ++SG AP+ L +F + + E +G++E A
Sbjct: 326 HKVFDRLVYGKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFSVLEGYGLTESCAATA 384
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYH 227
+ D K+ VG+ +PG+ +I D E +GE KEY N A+A
Sbjct: 385 FNPWDRQKIGTVGQPLPGSVIRIADDGEVLLHGEHLFKEYWNNPDATAEAL--------- 435
Query: 228 SVCIIGFNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLE 286
A WF++ D+G + G+ + T + L + V+ED
Sbjct: 436 --------ADGWFHTGDIGTLDEDGY---LRITGRKKEILVTAGGKNVAPAVMED----- 479
Query: 287 KILKVKAQCPKLKAIVQYEGKPDKPGVISWDE 318
+++A + +V +G+P +I+ DE
Sbjct: 480 ---RIRAHALVAECMVVGDGRPFVGALITVDE 508
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A QAA+D N ++S A+ ++KF LP F+ +G L P++K+KR V K Y I+ Y
Sbjct: 538 AIQAAVDDGN-AAVSKAESVRKFRILPTQFTEESGHLTPSLKLKRNVVAKDYAHEIEAIY 596
>gi|312138928|ref|YP_004006264.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311888267|emb|CBH47579.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 595
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 11/207 (5%)
Query: 198 GNG---EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
GNG ++ E+ V+ VAK + G+E V I+ EW D AGG
Sbjct: 39 GNGGWVDVTAAEFAQQVKAVAKGLMASGIELGDRVAILSGTRYEWVVLDYAIWTAGGCTV 98
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T+S + L S ++ VVE+ E + V P L+ ++Q E
Sbjct: 99 AIYDTSSADQAQWILEDSATSLLVVENSSHAETVKDVAEAAPSLREVLQIEAG------- 151
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI- 373
+ DEL+ G D+ + + + TL+YTSGT G K V L+H N +A +
Sbjct: 152 ALDELITRGSGISDDEVHERRHQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAESAAVQ 211
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTV 400
I + FLPL+H+ A+ +
Sbjct: 212 IALGDAMQEGRRTLMFLPLAHVFARAI 238
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G C ++SG A + L +F + +P+ E +G++E + A TV+ D
Sbjct: 330 LVYSKLRTALG-GECDRAVSGGAALGARLGHFFRGVGVPVYEGYGLTETSAAITVNTTRD 388
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ I G KI + E G + Y N + A A
Sbjct: 389 QKVGTVGKPINGHAAKIAEDGELLVRGPVVFGGYWHNEQATADAIRD------------- 435
Query: 234 FNAPEWFYS-DLGAIYAGGFAA 254
WF++ DLG+I G+ +
Sbjct: 436 ----GWFHTGDLGSIDTEGYVS 453
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 428 AAIDRANL---KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A ID A + + +SN ++I+K+ L DF++ TGEL PT+K+KR + +++ +I++ Y
Sbjct: 535 AEIDSAVVEGNRKVSNPEQIKKYRILEVDFTVETGELTPTLKLKRNIIHQQHAEMIERIY 594
>gi|453052868|gb|EMF00343.1| AMP-dependent synthetase and ligase [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 597
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 15/270 (5%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
PD+ G ++ E VRTV +A L LG+ V ++ PEW Y L A+ AG
Sbjct: 30 PDDGGWTDVGYDELRGTVRTVGRALLTLGVRPGDRVAVLARTRPEWTYVQLAALAAGAVV 89
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y T E L S A++ V ED Q +I ++A+ P L+ +V EG +
Sbjct: 90 VPVYPTAGDEELGWVLSDSGASVAVAEDASQAARIAALRARLPGLRHVVVMEGAAEGYPF 149
Query: 314 ISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF---NA 370
++ E+ A+ E LDR + + ++ C ++YTSGT G K L+H N+
Sbjct: 150 LAQIEVT----ASLSELLDRA-DHVTPSDLCGIIYTSGTTGLPKGCRLTHGNLAAAHDAT 204
Query: 371 ACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKVYKATQAAI 430
A I Y +S L +LPL+H+ AQ V +++ A + + +N V A AA
Sbjct: 205 AGFITYAPGDSTYL----YLPLAHLLAQLVQFGALLRGATLCYHSGRNEDIV--AGLAAT 258
Query: 431 DRANLKSISNA-QKIQKFEFLPADFSIPTG 459
+L S+ +K+ AD P G
Sbjct: 259 RPTHLPSVPRLFEKVHGTALALADAGGPDG 288
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V + Q A+D N +S A +I+ F LP DF + +GEL PT+K++R +++++ ID
Sbjct: 528 VRRLCQEAVDAVNARSAGPA-RIRAFAILPGDFGVESGELTPTLKLRRSVILERHAREID 586
Query: 482 KFYD 485
Y+
Sbjct: 587 ALYE 590
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+ + V++ G R R +L+GAAPI+ + + + + E +GM+E AG +++ P +
Sbjct: 327 VFAPVREVFG-GRLRWALTGAAPIAPATLDFLRACGVLVHEGYGMTETAGVISLNRPGAY 385
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN 235
+ VGR +PG + +I PD GEI + + G R + +
Sbjct: 386 RPGTVGRPVPGCEVRIA-PD----GEILAR----------GPGIFPGYHRDPAATAAVLD 430
Query: 236 APEWFYS-DLGAIYAGGF 252
A W + DLG + A GF
Sbjct: 431 ADGWLRTGDLGTLDADGF 448
>gi|298252738|ref|ZP_06976532.1| AMP-forming long-chain acyl-CoA synthetase [Gardnerella vaginalis
5-1]
gi|297533102|gb|EFH71986.1| AMP-forming long-chain acyl-CoA synthetase [Gardnerella vaginalis
5-1]
Length = 682
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++ VR AK + GL + +V ++ + EW +D + GG A +Y T+S E
Sbjct: 127 NQFLQEVRDAAKGLMHYGLRKGDAVALMCKTSYEWDVTDAAVMACGGVLATIYDTDSAEQ 186
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SD+ +VE +K +CP L+ I+ E G ++ EL G
Sbjct: 187 IRNIVNNSDSRFLIVETTDMRDKADGAIEECPSLERIICIE-----TGGLA--ELQAFGY 239
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
A DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 240 AVSDEELDARIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYLPNLLSEK 299
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
SV+ FLP +H A+ ++ + VA+TL
Sbjct: 300 DGSVLLFLPQAHSFARAIN---YIVVASTL 326
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A NA+ V Q ID AN + +S A+ ++KF LP +F+ G + +MK+ RP V+K
Sbjct: 609 AANNAV-VRAEVQKFIDLAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKIIRPRVIK 666
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 667 RYTTLLN 673
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG--AHT-VSA 171
L+ ++QA+G R R ++G AP+ EL +F +P+ E +G++E A T +
Sbjct: 410 LVYRPLRQALG-GRARWIVAGGAPLDPELLSFFRGAGVPVYEGYGLTETTAPCAFTPIGV 468
Query: 172 PDDFKLDGVGRTIPGTQTKIV-DPDEEGNGEICLKEYEANVRTVAKAFLKLG 222
P F+ VG P +I D + + G +Y N +F K G
Sbjct: 469 P--FREGSVGIAFPAFTLRIASDGEVQIKGTCVFHKYHKNDEATETSFTKDG 518
>gi|386714460|ref|YP_006180783.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
gi|384074016|emb|CCG45509.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
Length = 546
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 18/240 (7%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
KE+ AK + LG+E+ V I N PEW S GG + T +
Sbjct: 37 KEFNDMADETAKGLMALGVEKGEHVAIWSDNKPEWLLSQFATGKMGGVLVTVNTNYRAQE 96
Query: 265 CLHCLVTSDANICVV-EDDKQLEKILKVKAQCPKL----KAIVQYEGKP----------- 308
+ L SDA ++ ED + I +K CP+L K +Q E P
Sbjct: 97 LEYLLKQSDATTLILAEDFRGTSYIDILKEICPELSSSLKGDLQSERLPHLKNIITLSDK 156
Query: 309 DKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
+ PG +W++L+++GR+ DE L+ +++ + + YTSGT G K VMLSH NI
Sbjct: 157 EHPGCYTWNDLIDMGRSTSDEKLEERKRSLSYQDVINMQYTSGTTGFPKGVMLSHYNIVN 216
Query: 369 NAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK-NALKVYKATQ 427
N + +L + I +P H + + ++ AT+ ++ L+V KA +
Sbjct: 217 NGNQVADCMRLTNEDRLCIP-VPFFHCFGCVLGTLAAVSKGATMVILEQFEPLQVLKAVK 275
>gi|338534144|ref|YP_004667478.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
gi|337260240|gb|AEI66400.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
Length = 614
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ + V+ ++ + G++ V I + +W D+ A +Y +N
Sbjct: 39 DVTFARFLDEVKALSAGLVAQGVKPGDRVAIFANTSLQWLICDVAISAAQAITVPIYASN 98
Query: 261 SPEACLHCLVTSDANICVVEDDKQ-------LEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+PE C + L S+ + V++D+Q L ++ + QCP ++ +V +EG
Sbjct: 99 TPEECRYILNHSETTLVFVDNDEQDARQPGRLTRLRQKLPQCPSVRRVVAFEGPVAGGAE 158
Query: 314 ISWDELMELGRAA----PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
+S +++ GRA PD+ RV ++ + ++YTSGT G K V+L+H N +
Sbjct: 159 LSLADVVTQGRAEHAARPDDFEARV-NGVSMEDTAAIIYTSGTTGDPKGVILTHQNWAYE 217
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTV 400
A Q + SV+ FLPL+H+ AQ V
Sbjct: 218 AKA-AQSVGMMVPGDSVMLFLPLAHVFAQVV 247
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 27/152 (17%)
Query: 109 YRLVRWLILSKV----KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECA 164
+ L + L+ SKV + +G RV +SG AP+S ++ +F L + + E +G++E +
Sbjct: 333 FTLAKKLVFSKVHATISEKLG-GNMRVFISGGAPLSPKIGYFFDLLGLKVLEGYGLTETS 391
Query: 165 GAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE---EGNGEICLKEYEANVRTVAKAFLKL 221
T++ K+ VG +PGT+ KI E G G +K Y N A A
Sbjct: 392 AGTTINREHRIKIGSVGAPLPGTEVKIASDGEILIRGPG--VMKGYYKNPEATADA---- 445
Query: 222 GLERYHSVCIIGFNAPEWFYS-DLGAIYAGGF 252
+A WF++ D+GA+ A +
Sbjct: 446 ------------IDAEGWFHTGDIGALDADNY 465
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V+ A +AA+D+ N + A +++F L DFS T EL P + VKR +KY++ +
Sbjct: 545 EVHAAVKAAVDQVNAQQPPYA-TLKRFTVLENDFSQETEELTPKLSVKRKVCTQKYKAQL 603
Query: 481 DKFYD 485
D+ Y+
Sbjct: 604 DRMYE 608
>gi|296394475|ref|YP_003659359.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM
44985]
gi|296181622|gb|ADG98528.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM
44985]
Length = 599
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ E+ VR VAK + G+E V I EW D AG +Y T+
Sbjct: 45 QVTALEFYEQVRKVAKGLVASGVEHGDRVAICAPTRYEWALLDFAVWAAGAVTTSIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E + S+A + VV+D K L+ V A P L+ + ++G PG + EL
Sbjct: 105 SSEQVRWIISDSEAKLLVVQDAKLLQAHEAVLATIPTLRETLVFDG---DPGAVEQLELR 161
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI---IQYF 377
G PD LD + ++ TL+YTSGT G K V L+H N I+
Sbjct: 162 --GENVPDSELDSRRAQLGADKLATLIYTSGTTGRPKGVCLTHRNFLSEVIATQEPIKAM 219
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSV 405
+ + FLP++HI A+ + I S+
Sbjct: 220 APKQGRANTAMFLPMAHIFARALTITSM 247
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
Q A+D+AN K +SNA+ I+KF LP DFSI G L PT+KVKR V K+ ++ I+ Y
Sbjct: 542 QKAVDQAN-KHVSNAEAIKKFAVLPEDFSIEGGTLTPTLKVKRDVVSKQNEAAIEALY 598
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 20/146 (13%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
+ L L+ SK++ A+G + ++SG A IS L +F + + + + +G++E T
Sbjct: 328 HALFDRLLYSKLRAAVG-GKVVGAVSGGAAISPRLAHFFNGIGVSVYQGYGLTESTAGIT 386
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYH 227
++P ++ VG+ + G +I D E G + EY N A A
Sbjct: 387 FNSPVANRVGSVGKLVAGCSARIADDGEVLLAGPVVFSEYWRNPEATAGAI--------- 437
Query: 228 SVCIIGFNAPEWFY-SDLGAIYAGGF 252
WF+ DLG I GF
Sbjct: 438 --------EDGWFHCGDLGRIDEDGF 455
>gi|325676649|ref|ZP_08156325.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
gi|325552539|gb|EGD22225.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
Length = 595
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 11/207 (5%)
Query: 198 GNG---EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAA 254
GNG ++ E+ V+ VAK + G+E V I+ EW D AGG
Sbjct: 39 GNGGWVDVTAAEFAQQVKAVAKGLMASGIELGDRVAILSGTRYEWVVLDYAIWTAGGCTV 98
Query: 255 GMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVI 314
+Y T+S + L S ++ VVE+ E + V P L+ ++Q E
Sbjct: 99 AIYDTSSADQAQWILEDSATSLLVVENSSHAETVKDVAEAAPSLREVLQIEAG------- 151
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI- 373
+ DEL+ G D+ + + + TL+YTSGT G K V L+H N +A +
Sbjct: 152 ALDELITRGSGISDDEVHERRHQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAESAAVQ 211
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTV 400
I + FLPL+H+ A+ +
Sbjct: 212 IALGDAMQEGRRTLMFLPLAHVFARAI 238
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ A+G C ++SG A + L +F + +P+ E +G++E + A TV+ D
Sbjct: 330 LVYSKLRTALG-GECDRAVSGGAALGARLGHFFRGVGVPVYEGYGLTETSAAITVNTTRD 388
Query: 175 FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ I G KI + E G + Y N + A A
Sbjct: 389 QKVGTVGKPINGHAAKIAEDGELLVRGPVVFGGYWHNEQATADAIRD------------- 435
Query: 234 FNAPEWFYS-DLGAIYAGGFAA 254
WF++ DLG+I G+ +
Sbjct: 436 ----GWFHTGDLGSIDTEGYVS 453
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 428 AAIDRANL---KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A ID A + + +S+ ++I+K+ L DF++ TGEL PT+K+KR + +++ +I++ Y
Sbjct: 535 AEIDSAVVEGNRKVSSPEQIKKYRILEVDFTVETGELTPTLKLKRNIIHQQHAEMIERIY 594
>gi|171742877|ref|ZP_02918684.1| hypothetical protein BIFDEN_01994 [Bifidobacterium dentium ATCC
27678]
gi|283456096|ref|YP_003360660.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium dentium Bd1]
gi|171278491|gb|EDT46152.1| AMP-binding enzyme [Bifidobacterium dentium ATCC 27678]
gi|283102730|gb|ADB09836.1| fadD1 Long-chain-fatty-acid--CoA ligase [Bifidobacterium dentium
Bd1]
Length = 603
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++A V +AK + G+ SV I +W DL + G +Y TNSP
Sbjct: 52 EFQAKVIAIAKGLIARGIMPGDSVSITAHTCWQWTALDLAIMSIGALTVPVYETNSPAQV 111
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
S + EDD Q +KI V+AQCP L + + G I D ++E GR+
Sbjct: 112 TMIFNDSKVKMAFAEDDGQRDKIESVRAQCPDLGDVYVI-----RFGAI--DTIIEYGRS 164
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA-- 383
D + ++ T+VYTSG+ G K + LSH N F I Y + S
Sbjct: 165 VSDAEFYEREHAVKGSDLATIVYTSGSTGTPKGIELSHANFVF-----ITYSGVNSMPDI 219
Query: 384 -----LSVISFLPLSHIAAQTVDIY 403
++ FLPL+H+ A+ + +
Sbjct: 220 AMKPNRRLLLFLPLAHVFARYMQFF 244
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 402 IYSVMTVAATLWFADKNALKVYKATQA------------AIDRANLKSISNAQKIQKFEF 449
I S+ LW + A +V +A A+++AN + +S A+ I+KFE
Sbjct: 505 IISLDLAETNLWLESQGAERVENLEEATKNPIVRAEVERAVNKAN-ELVSRAESIRKFEI 563
Query: 450 LPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+P +F+ G + P+MK +R VV+ Y+S+ID
Sbjct: 564 VPDEFTEGNGLVTPSMKARRQAVVEHYRSLID 595
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 36/150 (24%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S + G ++SG AP+ + + +F + +P+ E +GM+E +V+
Sbjct: 334 LVYSSIMDVFG-GHVEYAVSGGAPLDSSIAHFFNGVGLPLLEGYGMTETCAPSSVNPTVG 392
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF 234
+K+ +G + G + DE GE+C+K +VC+
Sbjct: 393 YKIGTIGLPLQGVTMGV---DE--TGELCIKS--------------------PAVCVGYH 427
Query: 235 NAPE---------WFYS-DLGAIYAGGFAA 254
N P+ W ++ DLG+I GF +
Sbjct: 428 NHPDVTEQQIVDGWLHTGDLGSIDDDGFVS 457
>gi|455642065|gb|EMF21233.1| acyl-CoA synthetase [Streptomyces gancidicus BKS 13-15]
Length = 598
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 9/208 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ + A VR AK + G++ V ++ EW D AG +Y T+
Sbjct: 45 DVTAAAFLAEVRAAAKGLIAAGVQPGDRVGLMSRTRYEWTLLDFAIWSAGAITVPVYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S E L S A C+VE D + V+ + P LK + Q EG DEL
Sbjct: 105 SAEQVAWILGDSGATACLVELDAHTATVESVRDRLPALKHVWQIEGG-------GLDELG 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK-- 378
LG D +++ ++ T+VYTSGT G K +L+H + I++ +
Sbjct: 158 RLGADVADATVEERSSVAKADDPATIVYTSGTTGRPKGCVLTHRSFFAECGNIVERLRPL 217
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVM 406
+ SV+ FLPL+H+ + V I +M
Sbjct: 218 FRTGECSVLLFLPLAHVFGRLVQIAPMM 245
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ SK++ +G R ++SG AP+ L +F + + E +G++E A + D
Sbjct: 332 LVYSKLRAVLG-GRGEYAISGGAPLGERLGHFFRGIGFSVLEGYGLTESCAATAFNPWDR 390
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
K+ VG+ +PG+ +I D E +GE KEY N A+A
Sbjct: 391 QKIGTVGQPLPGSVVRIADDGEVLLHGEHLFKEYWNNPGATAEAL--------------- 435
Query: 234 FNAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVK 292
A WF++ D+G + G+ + T + L + V+ED +++
Sbjct: 436 --ADGWFHTGDIGTLDEDGY---LRITGRKKEILVTAGGKNVAPAVIED--------RIR 482
Query: 293 AQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
A + +V +G+P +I+ DE LGR
Sbjct: 483 AHALVAECMVVGDGRPFVGALITVDEEF-LGR 513
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A Q A+D N ++S A+ ++KF LPA F+ +G L P++K+KR V K Y I+ Y
Sbjct: 538 AIQEAVDDGN-AAVSKAESVRKFRVLPAQFTEESGHLTPSLKLKRNVVAKDYAHEIEAIY 596
>gi|283783323|ref|YP_003374077.1| AMP-binding protein [Gardnerella vaginalis 409-05]
gi|283441705|gb|ADB14171.1| AMP-binding enzyme [Gardnerella vaginalis 409-05]
Length = 682
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++ VR AK + GL + +V ++ + EW +D + GG A +Y T+S E
Sbjct: 127 NQFLQEVRDAAKGLMHYGLRKGDAVALMCKTSYEWDVTDAAVMACGGVLATIYDTDSAEQ 186
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SD+ +VE +K +CP L+ I+ E G ++ EL G
Sbjct: 187 IRNIVNNSDSRFLIVETTDMRDKADGAIEECPSLERIICIE-----TGGLA--ELQAFGY 239
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
A DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 240 AVSDEELDARIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYLPNLLSEK 299
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
SV+ FLP +H A+ ++ + VA+TL
Sbjct: 300 DGSVLLFLPQAHSFARAIN---YIVVASTL 326
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A NA+ V Q ID AN + +S A+ ++KF LP +F+ G + +MK+ RP V+K
Sbjct: 609 AANNAV-VRAEVQKFIDLAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKIIRPRVIK 666
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 667 RYTTLLN 673
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG--AHT-VSA 171
L+ ++QA+G R R ++G AP+ EL +F +P+ E +G++E A T +
Sbjct: 410 LVYRPLRQALG-GRARWIVAGGAPLDPELLSFFRGAGVPVYEGYGLTETTAPCAFTPIGV 468
Query: 172 PDDFKLDGVGRTIPGTQTKIV-DPDEEGNGEICLKEYEANVRTVAKAFLKLG 222
P F+ VG P +I D + + G +Y N +F K G
Sbjct: 469 P--FREGSVGIAFPAFTLRIASDGEVQIKGTCVFHKYHKNDEATETSFTKDG 518
>gi|123471198|ref|XP_001318800.1| AMP-binding enzyme family protein [Trichomonas vaginalis G3]
gi|121901568|gb|EAY06577.1| AMP-binding enzyme family protein [Trichomonas vaginalis G3]
Length = 633
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 35/277 (12%)
Query: 126 LDRCRVSLSGAAPIS-----TELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
++ R+ +G AP++ +++ LD + ++ +C G V A D KL G
Sbjct: 24 INSIRIHENGGAPLTHFTYRPDVRTLPEMLDSSVV-IYPKHDCFGERVVDA--DGKL-GP 79
Query: 181 GRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWF 240
+ I T+ K E+C+K AK LGLE + + N W
Sbjct: 80 YKWINYTEFK----------ELCIKW--------AKGLKALGLEPGDKLGVYSVNCIMWQ 121
Query: 241 YSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKA 300
+ G++YAG +Y + P A + S+ + +V K LEK ++VK Q P+++
Sbjct: 122 VAQFGSLYAGIVPVPVYDSLGPNAAQYITDHSECKVILVHK-KNLEKAMEVKKQVPRVQK 180
Query: 301 IVQYEGKPD--KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKP 358
++ + KP P +I+ DEL +LG ES+D + TN+ ++YTSG+ G K
Sbjct: 181 VISIDPKPSIQDPDLITIDELFKLG-----ESVDFKPVKLDTNDTAMIMYTSGSTGEPKG 235
Query: 359 VMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHI 395
+LSH NI + + + SFLPL+HI
Sbjct: 236 CVLSHQNIMAGGNGLGGMGTSVTQTDTYFSFLPLAHI 272
>gi|306822693|ref|ZP_07456071.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium dentium ATCC
27679]
gi|309800969|ref|ZP_07695101.1| AMP-binding enzyme [Bifidobacterium dentium JCVIHMP022]
gi|304554238|gb|EFM42147.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium dentium ATCC
27679]
gi|308222505|gb|EFO78785.1| AMP-binding enzyme [Bifidobacterium dentium JCVIHMP022]
Length = 603
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E++A V +AK + G+ SV I +W DL + G +Y TNSP
Sbjct: 52 EFQAKVIAIAKGLIARGIMPGDSVSITAHTCWQWTALDLAIMSIGALTVPVYETNSPAQV 111
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
S + EDD Q +KI V+AQCP L + + G I D ++E GR+
Sbjct: 112 TMIFNDSKVKMAFAEDDGQRDKIESVRAQCPDLGDVYVI-----RFGAI--DTIIEYGRS 164
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA-- 383
D + ++ T+VYTSG+ G K + LSH N F I Y + S
Sbjct: 165 VSDAEFYEREHAVKGSDLATIVYTSGSTGTPKGIELSHANFVF-----ITYSGVNSMPDI 219
Query: 384 -----LSVISFLPLSHIAAQTVDIY 403
++ FLPL+H+ A+ + +
Sbjct: 220 AMKPNRRLLLFLPLAHVFARYMQFF 244
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 402 IYSVMTVAATLWFADKNALKVYKATQA------------AIDRANLKSISNAQKIQKFEF 449
I S+ LW + A +V +A A+++AN + +S A+ I+KFE
Sbjct: 505 IISLDLAETNLWLESQGAERVENLEEATKNPIVRAEVERAVNKAN-ELVSRAESIRKFEI 563
Query: 450 LPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
+P +F+ G + P+MK +R VV+ Y+S+ID
Sbjct: 564 VPDEFTEGNGLVTPSMKARRQAVVEHYRSLID 595
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 36/150 (24%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S + G ++SG AP+ + + +F + +P+ E +GM+E +V+
Sbjct: 334 LVYSSIMDVFG-GHVEYAVSGGAPLDSSIAHFFNGVGLPLLEGYGMTETCAPSSVNPTVG 392
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF 234
+K+ +G + G + DE GE+C+K +VC+
Sbjct: 393 YKIGTIGLPLQGVTMGV---DE--TGELCIKS--------------------PAVCVGYH 427
Query: 235 NAPE---------WFYS-DLGAIYAGGFAA 254
N P+ W ++ DLG+I GF +
Sbjct: 428 NHPDVTEQQIVDGWLHTGDLGSIDDDGFVS 457
>gi|443491174|ref|YP_007369321.1| long-chain-fatty-acid-CoA ligase, FadD11_1 [Mycobacterium liflandii
128FXT]
gi|442583671|gb|AGC62814.1| long-chain-fatty-acid-CoA ligase, FadD11_1 [Mycobacterium liflandii
128FXT]
Length = 621
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ ++ V +A + LG+ V + EW D + AG +Y T
Sbjct: 50 VTWEQVGERVGRLAAGLISLGIAPQDRVALASSTRYEWVLVDFAVMRAGAATTTVYPTTI 109
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
+ + S + + V ED Q++K+++ +A+ P++ +V +GK D VI+ EL +
Sbjct: 110 AADVAYIVANSGSRVVVAEDQTQVDKLVEHRAELPEVARVVVIDGKGDGGWVITLAELEQ 169
Query: 322 LGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LG+ A ++D+ + I ++ +L+YTSGT G K V L+H T+ A+ I
Sbjct: 170 LGKQLLADSPAAVDQRVAAIGPDQLASLIYTSGTTGRPKGVRLTHGAWTYTASAIDALNV 229
Query: 379 LESAALSVISFLPLSH 394
L A L+ + +LPL+H
Sbjct: 230 LGPADLNFL-WLPLAH 244
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L L+ S +++ G R R +S AA + + ++F ++ I + E +G++E A A
Sbjct: 339 YQLADRLVFSTIRERFG-GRIRFFVSAAAALDRNVAQWFDAIGITVLEGYGLTETAAASF 397
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ P+ ++ VG P T+ KI +GEI L+
Sbjct: 398 INRPNAYRFGTVGWPFPATEAKIAT-----DGEILLR 429
>gi|395010586|ref|ZP_10393947.1| AMP-forming long-chain acyl-CoA synthetase [Acidovorax sp. CF316]
gi|394311320|gb|EJE48686.1| AMP-forming long-chain acyl-CoA synthetase [Acidovorax sp. CF316]
Length = 599
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 9/204 (4%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
LGL V +I N EW + +GA G G+Y T+ + + +D + V E
Sbjct: 55 LGLPAGGHVGVISENRIEWVLAQMGAGLVGAVTVGVYPTSPSNEVAYVVGHADIEVMVCE 114
Query: 281 DDKQLEKILKVKAQCPKLKAIVQYEGK------PDKPGVI-SWDELMELGRAAPDESL-D 332
D +Q +K+L P+LK I+ E K P+ +I ++ E+ LG AA ++L D
Sbjct: 115 DQEQTDKLLAALPDLPRLKKIIVIETKGLRSFAPEVRALIATFAEVEALGAAAGSQALVD 174
Query: 333 RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPL 392
L ++ ++YTSG+ G K M+S+ NI I+ +L+ AA + +S+LPL
Sbjct: 175 EALARQTLDDVGLMIYTSGSTGKPKGAMISYRNIRGVVPGIVDRLQLD-AATTHLSYLPL 233
Query: 393 SHIAAQTVDIYSVMTVAATLWFAD 416
H+A Q + + + + + + F +
Sbjct: 234 CHVAEQMLTSFVPVYIGSQVNFGE 257
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 114 WLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPD 173
WL+L ++ +GL RV+L+GAAPI ++ R+F L +P+ EV+G++E G T D
Sbjct: 334 WLVLRALQNFIGLREARVALTGAAPIPPDVVRFFRVLGLPLVEVYGLTESTGMVTGHRLD 393
Query: 174 DFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VG I G + +I D NGE+ L+
Sbjct: 394 QVVVGTVGVPILGVEHRIAD-----NGELQLR 420
>gi|384261959|ref|YP_005417145.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
gi|378403059|emb|CCG08175.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
Length = 607
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 113/255 (44%), Gaps = 26/255 (10%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
V +A A + GL+ V + N P+W +DL + AGG Y TN+ LH L
Sbjct: 53 QVAALANALIDHGLKPGDRVVLASENRPDWTIADLAILAAGGIPTPAYATNTEADHLHIL 112
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG-----VISWDELMEL-- 322
+A + +V + L A+ + +V + D P V SW+ L+
Sbjct: 113 DNVEAAMAIVS-TPLARRFLPAAARARRTPLVVLMDPADDVPRPAHVPVESWNALLAQGE 171
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
GR P + I N+ +++TSGT GA K VMLSH I N C+ + L +
Sbjct: 172 GREVPSTA-----HRIRANDLAVIIHTSGTGGAPKGVMLSHRAILHN--CMGAHDLLATI 224
Query: 383 ALS---VISFLPLSHIAAQTVDIYSVMTVAATLWFAD------KNALKVYKATQAAIDRA 433
LS +SFLPLSH T ++ + + A ++FA+ N L+ A+ R
Sbjct: 225 GLSHEIFLSFLPLSHSYEHTTGLFFPICLGAEVYFAEGVETLSANMLEARPTIMTAVPR- 283
Query: 434 NLKSISNAQKIQKFE 448
L + A+ +++ E
Sbjct: 284 -LYEMMRARLLRQIE 297
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 425 ATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
A A+DRAN + +S +++++F LP SI ++ PTMK +R + + Y +ID Y
Sbjct: 543 ALARAVDRANAR-LSPIERVRRFALLPEPPSIDNAQMTPTMKARRHIIRETYGDLIDSLY 601
Query: 485 D 485
+
Sbjct: 602 N 602
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 114 WLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPD 173
+L+ KV Q G R + +SG P+S E+ +F +L +P+ + +G++E A + + P
Sbjct: 337 YLVRRKVSQRFG-GRLKAMVSGGGPLSPEVGLFFRALGVPVLQGYGLTEAAPVVSCNLPC 395
Query: 174 DFKLDGVGRTIPGTQTKI 191
K+ VG + + +I
Sbjct: 396 RVKIGSVGPALKDVEVRI 413
>gi|374576732|ref|ZP_09649828.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
WSM471]
gi|374425053|gb|EHR04586.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
WSM471]
Length = 643
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 196 EEGNGEICLKE-------------YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYS 242
E GN EI L+E Y+ VR A ++LGL R + IIG N P+W +
Sbjct: 24 EYGN-EIALREKDLGLWRPFTWNAYQRRVRDFALGLVELGLGRQDVIGIIGDNRPDWVAA 82
Query: 243 DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV 302
++ GG + G+Y E + L +A + ED++Q++K+L + + PKLK I+
Sbjct: 83 EIATHAVGGLSLGLYRDVLDEEASYLLNYGEAQLVFAEDEEQVDKLLTLADRVPKLKHII 142
Query: 303 QYE----GKPDKPGVISWDELMELGRAAPD---ESLDRVLETIATNECCTLVYTSGTEGA 355
+ K D P ++S + ELGRA E DR+++ + L TSGT
Sbjct: 143 YSDPRGMRKYDDPRLMSAETFGELGRARATREPELYDRLVDATKGEDVAILCTTSGTTSH 202
Query: 356 SKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQ 398
K ML+ + + A + F + +S LPL I Q
Sbjct: 203 PKLAMLAAGRVLGHCATYLA-FDPKGPDDEYVSVLPLPWIMEQ 244
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
++ ++ +G R R + +G A + E ++F ++ +P+ ++G +E GA+T+
Sbjct: 331 ILFRALRDRLGFTRLRSAATGGAALGPETFKFFQAMGVPLRTLYGQTELLGAYTLHPAGK 390
Query: 175 FKLDGVGRTIPGT-QTKIVDPDEEGNGEICLK 205
D G + + + +I + D G GEI ++
Sbjct: 391 VDPDTTGVPMADSVEIRIDNADVHGVGEIVVR 422
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY + ++ N ++ AQ+I +F L + GEL T KV+R + +KY+ II
Sbjct: 539 EVYALLKKEVETVN-ATLPPAQRISRFLLLYKELDADDGELTRTRKVRRSVINEKYEGII 597
Query: 481 DKFY 484
D Y
Sbjct: 598 DAIY 601
>gi|423014561|ref|ZP_17005282.1| AMP-binding enzyme family protein 27 [Achromobacter xylosoxidans
AXX-A]
gi|338782430|gb|EGP46804.1| AMP-binding enzyme family protein 27 [Achromobacter xylosoxidans
AXX-A]
Length = 648
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
+VR VA LG++ V +IG N P + + + A G +Y + ++ L
Sbjct: 44 HVRQVAHGLASLGIQPGMHVAVIGENRPRLYMAMMAAQSLGAIPVPLYQDAVAQEMVYVL 103
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISWDELMELGRA 325
++ ++ VVED +Q++K+L+V+ QCP LK +V + + + ++S+D+L E+GR
Sbjct: 104 QDAEISVAVVEDQEQVDKMLEVREQCPALKHVVYDDPRGLRHYADAMLLSYDQLEEIGRD 163
Query: 326 APDESLD---RVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+ D R + + ++ + YTSGT G K V+L+H + A + + KL
Sbjct: 164 YAAQHPDFFARAVAAVQPHDAAAMFYTSGTTGKPKGVVLTHHALIDRARAVSEMEKLTDH 223
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
V+++LP + I ++ T+
Sbjct: 224 E-DVLAYLPPAWIGQNMFSYTQLLVTGFTV 252
>gi|326335848|ref|ZP_08202027.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691992|gb|EGD33952.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 600
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 10/226 (4%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTN 260
I K+Y + V++A L LG++ + ++ N EW D+ + G +Y T
Sbjct: 41 ISSKDYVEKINQVSRALLYLGVKPKDKIAVVSSNNRTEWHILDIAIMQIGAHNIPIYPTI 100
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
E ++ ++ C V D LEKI + + P LK I ++ + G W +++
Sbjct: 101 PKEDYIYIFNHAEVKYCFVSDKDLLEKIRNIVPEVPSLKEIFTFDNIENVRG---WSKIL 157
Query: 321 ELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
+G +++ ++ + I + T++YTSGT G K VMLSHDNI N +
Sbjct: 158 SIGENTENQNEVEAIKAQIQPTDMATIIYTSGTTGKPKGVMLSHDNIISNIKNCHARVPV 217
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA---DKNALKV 422
++ + +SFLP+ HI + + Y L+FA DK AL +
Sbjct: 218 KAGDVC-LSFLPVCHIFERML-TYLYQYNGIRLYFAESFDKVALNI 261
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K + ++++ F+ P ++SI G L PT+K+KR +++KY+ I + FY+
Sbjct: 546 KKLGKWEQVKVFDLTPDEWSIDAGHLTPTLKLKRRIILEKYKDIYNTFYN 595
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 110 RLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTV 169
++ R LI SK K+A+G + + G+A + L R F + IPI E +G++E + +V
Sbjct: 323 KIARKLIFSKWKKALGGNLQMIC--GSAALQPRLVRVFSAAGIPIWEGYGLTETSPVISV 380
Query: 170 SAP--DDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ + +K+ +G+ I + KI + +GEI K
Sbjct: 381 NCKKGNLWKIGTIGKPIDNIEVKIAE-----DGEILCK 413
>gi|317154546|ref|YP_004122594.1| AMP-dependent synthetase and ligase [Desulfovibrio aespoeensis
Aspo-2]
gi|316944797|gb|ADU63848.1| AMP-dependent synthetase and ligase [Desulfovibrio aespoeensis
Aspo-2]
Length = 636
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 221 LGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVE 280
LGL R V +IG N PEW +++L GG A G+Y + + + ++ + V E
Sbjct: 56 LGLGRGDIVILIGDNRPEWIWAELAIQGLGGVALGLYQDSPADEIEYIFALTECRLVVAE 115
Query: 281 DDKQLEKILKVKAQCPKLKAIVQYEGK------PDKPGVISWDELMELGRAAPDESLDR- 333
D +Q++KIL + P L+ IV ++ + PG+I + + LGR ++ DR
Sbjct: 116 DQEQVDKILSFRGNLPHLEHIVYHDTRGLAAYEESVPGLIDFKAVRRLGRERHADAADRY 175
Query: 334 VLETIATNEC--CTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLP 391
L +T E + TSGT G K MLSH N+ + A + + +SFLP
Sbjct: 176 ALWAGSTRETDPALIATTSGTTGRPKLAMLSHANL-LSMAHNLGLADPKHPTDEFVSFLP 234
Query: 392 LSHIAAQTVDIYSVMTVAATLWFA 415
L+ + Q +M VA+ L F
Sbjct: 235 LAWMGEQ------MMAVASALMFG 252
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Query: 67 WKKVTYK-----LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEP---YTYRLVRWLILS 118
W+ V K ++TT +KR++ N ++ A E P + Y + +
Sbjct: 283 WESVAAKVRGDIMETTPLKRFLYNRLLPIGYEYADALFEGREPGPWLKFKYFIADQGLFR 342
Query: 119 KVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLD 178
++ +G R R + +G A + + R+F +L + + +++G +E AG +
Sbjct: 343 ALRDRLGFSRMRSATTGGAALGPDTFRFFHALGVKLKQIYGQTEIAGISCIHQEGAVDFT 402
Query: 179 GVGRTIPGTQTKIVDPDE 196
VG IP T+ +I D E
Sbjct: 403 SVGAPIPETEVRITDTGE 420
>gi|296269926|ref|YP_003652558.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092713|gb|ADG88665.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 613
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 7/215 (3%)
Query: 195 DEEGNGEICLKEYEANVRT--VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
D G+G L +A R +A F LG++ ++ ++ N E +DLGA++A
Sbjct: 39 DRTGDGWATLTFAQARRRVLEIAAGFAALGVQPGDAIALMMPNRSEHVLADLGAVHARAL 98
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
+Y T +PE + A + V+ L + V + P+L+ I+ EG P
Sbjct: 99 PCTVYATFAPEQVAYVAKDVGAVVAVLGGPADLARWEPVLGELPRLRKIIMLEGAPSGDD 158
Query: 313 -VISWDELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
+SW E + +G AA +++ + ++ T++YTSGT G K V L+H N+ +
Sbjct: 159 RFLSWREFLAMGAEALAADPGAVEARWRAVTPDDVLTVLYTSGTTGHPKGVPLTHANVLY 218
Query: 369 NAACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
A + +L + IS+L +HIA + + +Y
Sbjct: 219 EVATTDRIVRLPFGG-TQISYLTYAHIAERVLSLY 252
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+LS ++ +GLDR + AAP+ +++R+F L + I +V+GM+E GA T + P +
Sbjct: 346 VLSGIRSLIGLDRAGWLATAAAPMPQDVQRFFAGLGLKILDVYGMTETTGAITSNTPTAY 405
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
KL VGR PG + +I + +GEI +
Sbjct: 406 KLGTVGRAEPGVEVRIAE-----DGEILTR 430
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V K +A ++ AN + ++ Q+++++ LP +++ +GEL PT+K+KR + KY +ID
Sbjct: 549 VLKEVEAGVEAAN-RRLARVQQVKRWRLLPDEWTPDSGELTPTLKLKRRRIHAKYADVID 607
Query: 482 KFY 484
Y
Sbjct: 608 DLY 610
>gi|329901853|ref|ZP_08272940.1| AMP-dependent synthetase and ligase [Oxalobacteraceae bacterium
IMCC9480]
gi|327548945|gb|EGF33562.1| AMP-dependent synthetase and ligase [Oxalobacteraceae bacterium
IMCC9480]
Length = 600
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
V F LGL V I+ N EW + LGA G G+Y+T+ + L SD
Sbjct: 47 VGLGFRALGLGPGAHVAILSENRLEWVLTQLGAGVVGAITVGVYSTSPSNEIAYVLNHSD 106
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-------DKPGVISWDEL----MEL 322
+ + ED +Q +K+L Q P L+ I+ E K D V+ + EL E
Sbjct: 107 TEVIICEDQEQADKVLAAIDQLPLLQKIIVLEKKGYDETHALDPQRVMRFSELEAMGAEY 166
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G+ P +D L+ ++ L+YTSG+ G K M+S+ NI AA + L+
Sbjct: 167 GQRHP-ALVDACLDAQQPDDTALLIYTSGSTGKPKGAMISYANIAAMAAGVADRLDLDGT 225
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +S+LPL H+A Q + + + + + + F +
Sbjct: 226 T-THLSYLPLCHVAEQMLTAFVPLYLGSRVDFGE 258
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 67 WKK----VTYKLQTTG-VKRWI-ANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKV 120
W+K ++ K+ +G V+RW+ A ++ + A +++ + ++ L LI +
Sbjct: 282 WEKLHSSISIKMHESGPVRRWLFATAMRTCAPFAEKAAHQRSPLQQLSFALCYLLIFRAL 341
Query: 121 KQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGV 180
+ +GL R +++L+GAAPIS + ++F +L +P+ EV+GM+E +G DD ++ V
Sbjct: 342 QNFIGLRRVKIALTGAAPISPAIVQFFRTLGVPLVEVYGMTESSGMVLGQRLDDVRIGRV 401
Query: 181 GRTIPGTQTKIVDPDE-EGNGEICLKEY----EANVRTVAKAFLKLG 222
G G + ++ + E + G + + Y EA T+ +L G
Sbjct: 402 GLPTLGVEHRLSEQGELQIRGGVVFQGYYKNPEATAATIIDGWLHTG 448
>gi|408671205|ref|YP_006871276.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
gi|407241027|gb|AFT83910.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
Length = 645
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
++ V+ VA L G++R V II + EW D+ + G +S +
Sbjct: 39 DFWNEVKRVASGLLHYGIKRGEKVVIISDSRREWVIIDIATLGLGCVDVPRGNDSSEDEL 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV------QYEGKPDKPGVISWDEL 319
+ + S++ VE++KQL+K+L K +K IV YE K V S+ +L
Sbjct: 99 TYIINHSESTFIFVENNKQLQKVLSKKHDLRLVKCIVVIDDDKSYEEKMGTITVFSYKKL 158
Query: 320 MELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
+ELG RA P +S D +E ++ + T++YTSGT G K VML H++ F +
Sbjct: 159 LELGAEYLRANP-KSFDIEIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYD 217
Query: 376 YFKLESAALSVISFLPLSH 394
Y +IS LPL H
Sbjct: 218 YLPAIKPGKIMISILPLWH 236
>gi|291279877|ref|YP_003496712.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
gi|290754579|dbj|BAI80956.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
Length = 632
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 20/227 (8%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
EI K+Y V A +G++ +V IIG N PEW + A + G+Y +
Sbjct: 34 EITWKDYFVKVVKFAHYLESIGVKSGDTVAIIGDNKPEWLICEFAAQLLKAYPVGIYQDS 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK-----PDKPGVIS 315
+ + L T++A I V ED +Q++K+L++K +C +K IV Y+ + D +I
Sbjct: 94 VSDEIEYLLNTTEAKIVVAEDQEQVDKVLEIKDKCENIKKIVYYDDRGMYLYADIEDLIY 153
Query: 316 WD-------ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITF 368
++ +L EL + ++S + E IA CT TSGT K ML+H N+ F
Sbjct: 154 FEDAINFDLDLKELEKFFHEKSSEVTEEDIAV--MCT---TSGTTSKPKVAMLTHKNLIF 208
Query: 369 NAACIIQYF-KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWF 414
+ + + K E+ +SFLPL I Q + + S + F
Sbjct: 209 MSTSLAKADPKYETD--DFVSFLPLPWIGEQMMSVASAQIFGFVVNF 253
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 74 LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEP-----YTYRLVRWLILSKVKQAMGLDR 128
+ +T K ++ N K + + A L+ EP YRL + K+K+ +G +
Sbjct: 291 MDSTKFKNYVFN--KCIKIGYEYADLKFEKKEPTFLQNLKYRLAYIFLFRKLKERLGFCK 348
Query: 129 CRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQ 188
R +++G A + + R+F ++ + + +++G +E +G + DD VG+ I GT+
Sbjct: 349 LRSAMTGGAALGPDTFRFFHAIGVSLKQIYGQTEISGISCIHRDDDIDFTSVGKPIEGTE 408
Query: 189 TKIVDPDEEGNGEICLK 205
KI + +GEI K
Sbjct: 409 IKITE-----DGEIISK 420
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY+ + + N + + + KI+KF L +F GEL T KV+R F+ +KY+ I+
Sbjct: 537 EVYELVANEVRKVN-EQLKDEHKIKKFVLLYKEFDADDGELTRTRKVRRGFIEEKYKEIV 595
Query: 481 DKFY 484
Y
Sbjct: 596 SALY 599
>gi|218437444|ref|YP_002375773.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
gi|218170172|gb|ACK68905.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
Length = 638
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 14/239 (5%)
Query: 193 DPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
DP + I E + A+ LG+E + + N P WF +D G I AG
Sbjct: 32 DPHSKPEVIITYTELCEQIEQFARGLQALGVESGAKIALFADNCPRWFIADQGIIMAGAV 91
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV---QYEGKPD 309
A + + L+ SD+ VVED K L+K+ Q I+ +Y D
Sbjct: 92 NAVRSSQAERQELLYIYTDSDSIALVVEDLKTLQKLRPELDQLNTQFVILLSDEYSPTDD 151
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
++++ +L++LG P + R E +A TL+YTSGT G K VML+H N +
Sbjct: 152 PLKILNFKQLLDLGSNHPFNPVSRTKEDLA-----TLLYTSGTTGKPKGVMLTHGNFLYE 206
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD----KNALKVYK 424
F+ + V+S LP H +TV+ Y V++ +T + + KN LK +K
Sbjct: 207 INSFGVAFQPDPGD-RVLSILPSWHAYERTVEYY-VLSQGSTQIYTNLRNFKNDLKQFK 263
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 443 KIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+I+ FE + FSI G + T+K+KRP V ++Y++IID Y
Sbjct: 595 QIKVFELILEPFSIDNGMMTQTLKIKRPVVTERYRAIIDGMY 636
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 93 QHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDI 152
+ MA ++ V P +R+ L+ K+++ +G + + +SG ++ + ++ ++I
Sbjct: 327 ERLMARVKATVLAPL-HRVGDRLVYQKIREGVG-GKVKAWISGGGSLARHIDTFYEIVNI 384
Query: 153 PICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD 195
P+ +G++E + V D G +P T+ +IVDP+
Sbjct: 385 PVLVGYGLTETSPVTNVRTLDHNVRGSSGPPLPRTEIRIVDPE 427
>gi|324999919|ref|ZP_08121031.1| AMP-forming long-chain acyl-CoA synthetase [Pseudonocardia sp. P1]
Length = 614
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E+ +E+ V +A + G++ + ++ EW D + AG +Y T+
Sbjct: 46 EVTAREFAEQVTRLAAGLVAAGVQAGDRIALLSRTRYEWTLFDYAILAAGAVTVPIYETS 105
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPGVISWD 317
SP+ L S A VVE + + KV+A P L+ + Q E PD P + +
Sbjct: 106 SPDQIGWILSDSGAVAIVVETAEHAASVEKVRADLPGLRHVWQMEPSAAAPDSPSAV--E 163
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+L LG D+ + + ++ CTL+YTSGT G K L+H N+ I
Sbjct: 164 QLGGLGSDTSDDVVHERRGGVRADDLCTLIYTSGTTGRPKGCELTHRNLLTECRTITATV 223
Query: 378 -KLESAALSVISFLPLSHIAAQTV 400
L +A SV+ FLPL+H+ + +
Sbjct: 224 PDLLAAGGSVLLFLPLAHVFGKAI 247
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ A+G R ++SG+AP+ L +F + +P+ E +G++E + T++ D
Sbjct: 339 LVYGKLRAAVG-GNVRAAVSGSAPLGARLGHFFRGIGLPVLEGYGLTETSAGITLNTLDA 397
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEG----NGEICLKEYEANVRTVAKAFLKLGLERYHSVC 230
++ VGR +PG +I E+G G+I + Y N +A + G
Sbjct: 398 QRVGSVGRPVPGCAARIA---EDGEILLRGDIVFRGYWNNEEASKEALEQDG-------- 446
Query: 231 IIGFNAPEWFYS-DLGAIYAGGF 252
WF+S D+G I GF
Sbjct: 447 --------WFHSGDIGEIDDAGF 461
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 428 AAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AA++ AN +++S A++I+KF LP DF+ GEL PTMKVKR V+ Y I+ Y
Sbjct: 551 AAVEEAN-QAVSRAEQIRKFRILPTDFTEAGGELTPTMKVKRKVVLDSYADDIEALY 606
>gi|302866620|ref|YP_003835257.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
gi|302569479|gb|ADL45681.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
Length = 620
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
V ++ ++GLE + I+ + E + DL A++ G + +Y T S E +
Sbjct: 54 EVAELSAGLAEIGLEAGRHMLIMMSSRTEHWLVDLAAVHLGAVPSTIYPTLSAEQMRYLA 113
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG--VISWDELMELGRAA- 326
S A + V+E +LE+ + A P L +V + +P +P + + LGRAA
Sbjct: 114 RHSAAQVLVLEGPAELERWRPIPADLPDLLRVVLVD-EPAEPAGDAVPLSRVRTLGRAAR 172
Query: 327 ---PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
PD + +R TI + TL+YTSGT G K V+LSH N+ + A + + A
Sbjct: 173 EADPD-AFERRWRTIRPEQPVTLLYTSGTTGNPKGVVLSHHNVIYQAVALDAMVSVPDHA 231
Query: 384 LSVISFLPLSHIAAQTVDIYS 404
+V ++LPL+HIA + + IY+
Sbjct: 232 PTV-AYLPLAHIAERFLGIYN 251
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L ++ +GL SGAAPI ++ R+ L + + EV+G++E G T++ PD F
Sbjct: 344 VLRPLQATLGLQNMTWPGSGAAPIPVDVLRFLAGLGVDVLEVWGLTETTGTATLNTPDRF 403
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VGR G + ++ D +GE+ ++
Sbjct: 404 RTGTVGRPNVGMEVRLAD-----DGEVLVR 428
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QAA+D AN + ++ ++++ F+ LP+ ++ +GEL PT+K++R +V +Y ID Y
Sbjct: 552 QAAVDAANAR-LARPEQVKTFQVLPSAWTPESGELTPTLKLRRRVIVDRYGDRIDALY 608
>gi|385681438|ref|ZP_10055366.1| long-chain acyl-CoA synthetase [Amycolatopsis sp. ATCC 39116]
Length = 612
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 12/222 (5%)
Query: 189 TKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIY 248
T + DPD + + + V++ LGL R + I+ + P+ +DL A +
Sbjct: 34 TSLDDPDRP---TLTWSAFRDEIAAVSRGLADLGLRRGERMLIMAPSTPDHLIADLAATH 90
Query: 249 AGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP 308
G + Y T SPE + S I V++ +L++ +V + P L+ IV +
Sbjct: 91 LGAISCTAYATLSPEQISYVARHSGTPIVVLQGTDELKRWQQVLHELPALRRIVMIDADA 150
Query: 309 DKPG---VISWDEL----MELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
G +S EL EL +A P ++ + + + ++YTSGT G K V+L
Sbjct: 151 VPAGDERFVSLAELRARGAELHQADP-QAFEDSWADLRPEDPIAMIYTSGTTGDPKGVVL 209
Query: 362 SHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
SH N+ F A + LS I++LPL+HIA + + IY
Sbjct: 210 SHHNVIFEAYA-VHALHESPMHLSNIAYLPLAHIAEREISIY 250
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L+ V+ +G D+ SGAA + E+ + L + I EV+G+SE +GA T ++ F
Sbjct: 344 VLAPVRALLGFDKLHFCSSGAAALPVEVLYFLAGLGVEIHEVWGLSETSGAITSNSAKAF 403
Query: 176 KLDGVGRTIPGTQTKIVDPDEE--GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIG 233
+ VGR + T+ K VD D E G + Y ++A A + G
Sbjct: 404 RAGSVGRALADTEIK-VDADGELLVRGPLVFMGYLQEDGSIASALDEDG----------- 451
Query: 234 FNAPEWFYS-DLGAIYAGGF 252
WF++ D+G I A GF
Sbjct: 452 -----WFHTGDIGTIDADGF 466
>gi|284042852|ref|YP_003393192.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
gi|283947073|gb|ADB49817.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
Length = 602
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I E A ++ F+ + +E V I+ PEW Y D A G +Y TN
Sbjct: 46 DITFGEVGAIADEISLGFVDVRIEPGDRVAILCRTRPEWSYVDFAATQIGAVVVPIYPTN 105
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---GKPDKPG-VISW 316
SP+ C L SDA V E+ +Q+ K+ V+ + P LK ++ E P++ G I+
Sbjct: 106 SPQECEFVLADSDAVAVVCENMEQVAKVAAVRERLPHLKRVIVIEPGDATPEQLGDAITL 165
Query: 317 DELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQY 376
D L G + R IA + T +YTSGT G K +L+H N + Q
Sbjct: 166 DVLRARGHNHDRAEIARRYSAIAPGDPYTFIYTSGTTGPPKGCVLTHGNYRAMLDMVEQT 225
Query: 377 FKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALKV 422
+ ++ + +LPL+H A + + S V A++ + + L++
Sbjct: 226 GGVVEDEVTYL-YLPLAHSYALLIQLLS-FDVGASIAYWSNDPLQI 269
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 22/140 (15%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+ SKV+ A G + R ++SGAAPI+ E+ +F + +P+ E +GM+E + A T +P++
Sbjct: 339 LFSKVRGAFG-GQVRQAISGAAPIAKEILEFFYACGVPVFEGYGMTETSTASTFQSPEEH 397
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFN 235
K VG+ PG + +I + +GE+ +K AN+ YH F
Sbjct: 398 KFGTVGKPFPGIELRIAE-----DGELLIK--GANI-----------FAGYHKREDASFG 439
Query: 236 A--PEWFYS-DLGAIYAGGF 252
A W ++ DL +I A G+
Sbjct: 440 AVVDGWLHTGDLASIDADGY 459
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV + QA +D AN K + +K++KF L D S TGEL PT+KVKR V +KY +
Sbjct: 538 KVLELIQADLDTANDK-YAQVEKVKKFFILDHDLSQETGELTPTLKVKRNIVNEKYAADF 596
Query: 481 DKFY 484
Y
Sbjct: 597 AALY 600
>gi|380302321|ref|ZP_09852014.1| AMP-forming long-chain acyl-CoA synthetase [Brachybacterium
squillarum M-6-3]
Length = 603
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 115/278 (41%), Gaps = 60/278 (21%)
Query: 143 LKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEI 202
L R S D+PI E + D GR +P T VD
Sbjct: 23 LGRLADSRDVPIFE-------------------RADANGRYVPMTTAAFVD--------- 54
Query: 203 CLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSP 262
V+ +AK + G+E V ++ EW +D +AG + +Y T+SP
Sbjct: 55 -------EVKALAKGLIASGVESGDVVALLSRTRYEWVLADYAIWFAGAVSVPIYETSSP 107
Query: 263 EACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVIS---WDEL 319
S A +VE D+ E + V+ + P L D+ GVI +EL
Sbjct: 108 SQIQWIASDSGARFALVEADRHREDMESVRGELPAL----------DRIGVIEDGILEEL 157
Query: 320 MELGRAAPDESLD--RVLETIATNECCTLVYTSGTEGASKPVMLSHDNI--TFNAACIIQ 375
+E G DE L+ R T+A + T++YTSGT G K L+H N T +A +
Sbjct: 158 VERGNDVSDEELEARRTSRTLA--DVATIIYTSGTTGRPKGAELTHGNFVDTTRSAVTLL 215
Query: 376 YFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
K+ ++ FLP++H+ A+ ++TV AT W
Sbjct: 216 GDKVLPPGSRLLMFLPMAHVFAR------LITVLATAW 247
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V QAA+DRAN + +S A+ I+ FE + DF+ G L P+MK+KR V K + +I
Sbjct: 534 RVRAELQAAVDRAN-QLVSKAESIRVFEVIDTDFTEENGYLTPSMKLKRNVVTKDFSEVI 592
Query: 481 DKFY 484
D+ Y
Sbjct: 593 DRIY 596
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ +K++ AMG D R ++SG AP+ T L +F + + + E +G++E V+ P +
Sbjct: 333 LVFAKLRAAMGGD-VRYAVSGGAPLGTRLAHFFRGIGVTVLEGYGLTETTAPIGVNLPWN 391
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K VG +PG+ +I + +GEI +K
Sbjct: 392 VKPGTVGPPLPGSAVQISE-----DGEILVK 417
>gi|424842397|ref|ZP_18267022.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
gi|395320595|gb|EJF53516.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
Length = 607
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
+ V+ L++G++ + +I +N PEW DLG G +Y T SP+ ++
Sbjct: 44 INKVSWGLLQMGMKPGDKIALISYNNRPEWNIMDLGMQQIGVINVPVYPTISPDDYVYIF 103
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY-----EGKPDKPG--VISWDELMEL 322
+ V L+K+ ++ P L+AI + +G+ D G V W+ +
Sbjct: 104 NDATIKYAFVGHGDLLDKVRTAQSDIPSLQAIFTFDEADAQGQVDANGQEVSFWEHIW-- 161
Query: 323 GRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
G + + + I + T++YTSGT G K VMLSH+NI N ++ + L+
Sbjct: 162 GEHPNMDIIQAHKDKIKAEDLATIIYTSGTTGKPKGVMLSHNNIATNVRDVLPFIPLQPQ 221
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
++ +SFLP+ H+ +TV YS M A +++A
Sbjct: 222 DIA-LSFLPICHVFERTV-TYSYMAKGAQVFYA 252
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
KV QA I+R N + S ++I+KF +P + + TGEL PTMK+KR ++ Y+ I
Sbjct: 544 KVLAYFQAVINRYNPR-FSKVEQIKKFHLVPTAWGVETGELTPTMKLKRRVILANYEDAI 602
Query: 481 DKFY 484
+K Y
Sbjct: 603 EKLY 606
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 67 WKKVTYKLQTTG-VKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMG 125
++K+ K+Q G +K I N+A + ++ + + E +++ L+ SKV++ +G
Sbjct: 281 YEKMMLKVQAEGGLKEKIFNWALGLTEKYDFDWQAAGL-EAIKWKIADKLVFSKVRERLG 339
Query: 126 LDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFK--LDGVGRT 183
R + ++GAA + + F ++ +PI E +G++E + A +++ + ++ + VG
Sbjct: 340 -GRLKGIVTGAAACPPRMTQLFSAVGVPIREGYGLTETSPAISINIFEPYQAMIGSVGPI 398
Query: 184 IPGTQTKIVDPDEEG--NGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+P Q KI D G GE+ +K + +G R FN WF
Sbjct: 399 LPSVQVKIDQDDSYGPNEGEVLVKGNS----------VMMGYYRKEDKTAEVFNDEGWFL 448
Query: 242 S-DLGAI 247
+ D+G I
Sbjct: 449 TGDIGKI 455
>gi|296134001|ref|YP_003641248.1| AMP-dependent synthetase and ligase [Thermincola potens JR]
gi|296032579|gb|ADG83347.1| AMP-dependent synthetase and ligase [Thermincola potens JR]
Length = 562
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 212 RTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL---HC 268
R AK F+KLG+++ V I N PEW S G A + T N+ +
Sbjct: 53 RLAAKGFMKLGIKKGDHVAIWATNVPEWVISQFAV---GKMGAVLVTVNTNYKVFELEYL 109
Query: 269 LVTSDANICVVED----------------DKQLEKILKVK-AQCPKLKAIVQYEGKPDKP 311
L SD+ ++ D + Q K ++K A+ P LK ++ Y G+ P
Sbjct: 110 LKQSDSTTLILIDGWRDSSYTGMITELCPELQECKPGELKSARLPLLKNVI-YIGENCPP 168
Query: 312 GVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
G+ISWDE+ME+G++ DE LD ++ ++ + YTSGT G K VML+H NI NA
Sbjct: 169 GMISWDEMMEMGKSVSDEELDARQRSLDPDDVINMQYTSGTTGFPKGVMLTHKNIVNNAI 228
Query: 372 CIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
+ I +PL H + + + AT+
Sbjct: 229 AVADCMNFSHKDRLCIP-VPLFHCFGCVLGTMTCVVSGATM 268
>gi|91227124|ref|ZP_01261608.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
gi|91188776|gb|EAS75063.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
Length = 602
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 5/224 (2%)
Query: 196 EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
EE G I ++ V ++ A L GL + I N P+W +D+ A+
Sbjct: 31 EEWQG-ITWTQFGQQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADIAALQLRSVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPG 312
+Y TN+ + + +D + V + Q + + + QC +L+ IV D
Sbjct: 90 IYPTNTAAQSAYIINNADVKVLFVGEQPQFDAAVSIFDQCEQLELIVAMSDDIELGDHDF 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
VISW + G A LD L+ ++ TL+YTSGT G K VML + NI
Sbjct: 150 VISWQAFVAKGDATYQVELDARLDQAKEDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L + +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLSLSQSDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPRAFSMDDGELTPTQKLRRKVINDKYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y L L+LSK++ +G + G A + + R+F ++ I + +GM+E
Sbjct: 324 SYALADKLVLSKLRALLG-GQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
TVS DD F D +G ++PG Q KI + +E
Sbjct: 381 TVSCWDDKCFNPDSIGMSMPGAQVKIGENNE 411
>gi|359796385|ref|ZP_09298985.1| AMP-binding protein [Achromobacter arsenitoxydans SY8]
gi|359365658|gb|EHK67355.1| AMP-binding protein [Achromobacter arsenitoxydans SY8]
Length = 648
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
+VR VA LG++ V +IG N P + + + A G +Y + ++ L
Sbjct: 44 HVRHVAHGLASLGIQPGMHVAVIGENRPRLYMAMMAAQSLGAIPVPLYQDAVAQEMVYVL 103
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELMELGR- 324
++ ++ VVED +Q++K+L+++AQCP LK +V + + ++S+++L E GR
Sbjct: 104 QDAEISVAVVEDQEQVDKMLEIRAQCPALKHVVFDDPRGLRHYSDAMLLSYEQLEERGRE 163
Query: 325 --AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
A + DR + + ++ + YTSGT G K V+L+H + A + KL
Sbjct: 164 YAAKHPDFFDRAVAAVQPHDAAAMFYTSGTTGKPKGVVLTHHALIDRARAVSDMEKLTDH 223
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
V+++LP + I ++ T+
Sbjct: 224 E-DVLAYLPPAWIGQNMFSYTQLLVTGFTV 252
>gi|408500954|ref|YP_006864873.1| putative O-succinylbenzoyl-CoA synthetase, MenE [Bifidobacterium
asteroides PRL2011]
gi|408465778|gb|AFU71307.1| putative O-succinylbenzoyl-CoA synthetase, MenE [Bifidobacterium
asteroides PRL2011]
Length = 660
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 12/216 (5%)
Query: 193 DPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
DP ++ + A VR VAK + LG+E+ +V I + +W +D G
Sbjct: 40 DPMTRNWHDVKAGQMSARVRAVAKGMMALGVEKGSTVVIYASTSYDWGVTDFACAAIGAV 99
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
+ +Y T+SP + D + D + + + +V+ PKLK + +E
Sbjct: 100 SVPIYETDSPSQAQKIVQDVDCVLAFAGDSEHAQILEQVRGSSPKLKYVFNFEAG----- 154
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDN---ITFN 369
+ + E G+ DE LD + + ++ T+VYTSG+ G K MLS+ N I F
Sbjct: 155 --GLNAVSEFGQGIDDERLDEAIARVKADDLATIVYTSGSTGEPKGAMLSNRNFVHIVFV 212
Query: 370 AACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSV 405
++ + + +A ++ FLPL+H A+ + ++
Sbjct: 213 GWDVL--YHMLAAPSRLMLFLPLAHCFARYIQYVAI 246
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
++ Q +D+AN ++S A+ ++KF L DFS G L P++KV RP V+++Y ++D
Sbjct: 539 IHAFIQQYVDKANC-NVSRAESVRKFLVLDKDFSQEDGTLTPSLKVVRPEVLRQYAELVD 597
Query: 482 K 482
K
Sbjct: 598 K 598
>gi|415963044|ref|ZP_11557853.1| AMP-dependent synthetase and ligase, partial [Acidithiobacillus sp.
GGI-221]
gi|339832871|gb|EGQ60754.1| AMP-dependent synthetase and ligase [Acidithiobacillus sp. GGI-221]
Length = 493
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 2/212 (0%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
+ VR A+ L LG+ R V ++ N+ +W D + G +Y T SP
Sbjct: 44 FAGQVRARARGLLHLGVRRGERVILMAPNSVDWAIMDFAILNVGAITVPLYPTFSPREIH 103
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
L S A + ++E + +++ + +++ G+ W L G
Sbjct: 104 FVLGDSGAGLILLEGAAEWQRLGGEGGWGVADDRILLRDAAAAQNAGLRHWASLENEGAT 163
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS 385
PD L+ L + + T+VYTSGT G K VMLSH NI N + L A
Sbjct: 164 VPDSGLEERLAGLQRQQTATIVYTSGTTGWPKGVMLSHGNILSNIEGFLPLVPLH-AGQR 222
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
++S LPLSH+ + + + + +A++
Sbjct: 223 LLSILPLSHVFERGTGHFGAYLLGLEVAYAER 254
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L R L++ +++ +G R R +SG AP+ + R+F+ L +PI E +GM+E + +
Sbjct: 319 LTRRLLIRSLRKKLG-GRLRFFVSGGAPLDAGITRFFVDLGLPIVEGYGMTEASPVIAAN 377
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VGR +P + ++ +GEI ++
Sbjct: 378 PLEAIHPGTVGRFLPNLEGRLA-----ADGEILVR 407
>gi|423725615|ref|ZP_17699731.1| hypothetical protein HMPREF1078_03620 [Parabacteroides merdae
CL09T00C40]
gi|409234062|gb|EKN26893.1| hypothetical protein HMPREF1078_03620 [Parabacteroides merdae
CL09T00C40]
Length = 611
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 9/210 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I KE+ V AKA + G+E ++ + N P+ FY+D GA + MY TN
Sbjct: 35 KISWKEFSEKVMLTAKAMAEFGIEVQDNIGVYSQNMPQCFYTDFGAYANRVVSIPMYATN 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG----KPDKPGVISW 316
SP + + + + V + Q KV+ + LK +V ++ P+ I +
Sbjct: 95 SPGQIEYIINDAHIHTLFVGEQLQYNNAFKVQKESQYLKRLVVFDPAVKLNPEDKTSIYF 154
Query: 317 DELMELGRAAPDESLDRVLETIATNE-CCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
D+ + LG A E+ ++ A E T++YTSGT G SK VML H N + A I
Sbjct: 155 DDFLRLGDNAHAETTVKIRTNEAVPEDLATIIYTSGTTGESKGVMLHHSN--YLEAMRIH 212
Query: 376 YFKLESAALSVIS--FLPLSHIAAQTVDIY 403
+L +S FLPL+HI + Y
Sbjct: 213 DIRLPMVTDKDLSMCFLPLTHIFEKAWSYY 242
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 87 AKSTSLQHYMAYLEKNVSEPY----TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTE 142
A T ++ + Y K++ P+ + + + + +K+ +G++R R AP+S
Sbjct: 303 AIETGRKYNLEYKNKSIPAPFGLKLKFEMYNKTVFNLLKRVLGIERGRFFPVAGAPLSDT 362
Query: 143 LKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEI 202
+ + S++IPI +G+SE F+ +G +P Q +I DP+ N EI
Sbjct: 363 VNEFLQSVNIPIVYGYGLSETTATVCFYPEIGFQFGSIGEVMPDVQVRI-DPE---NSEI 418
Query: 203 CLK 205
+K
Sbjct: 419 LVK 421
>gi|256378405|ref|YP_003102065.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
gi|255922708|gb|ACU38219.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
Length = 601
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 5/209 (2%)
Query: 198 GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMY 257
G + A V T+ + LG+ R V I PE + +DL A++ G Y
Sbjct: 37 GGTTLTWSRLRAEVATLTRGLAALGIRRGDRVLIAMSKRPEHWITDLAAVHLGALPCSTY 96
Query: 258 TTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVI 314
T S E H S+A+ V+E +QL + V P L+ +V + P P +
Sbjct: 97 DTLSTEQIGHIARHSNASTLVLEGAEQLARWRPVLDDLPNLRTVVVLDPDALPPGDPRFV 156
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACII 374
+ EL A PD + + + + + TLVYTSGT G K V+LSH N + +
Sbjct: 157 GYAELRG-EPATPDAAFEALTDAVGPTWPLTLVYTSGTTGDPKGVVLSHRNAVYESLA-Q 214
Query: 375 QYFKLESAALSVISFLPLSHIAAQTVDIY 403
++ +++LP++HIA + + +Y
Sbjct: 215 EHLVPGPEHPRTVAYLPMAHIAERVLGVY 243
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L ++ A+GLD C + SGAAPI + + L +P+ EV+G+SE GA TVS PD F
Sbjct: 337 VLRPIRAAIGLDECVRAYSGAAPIPVPVLEFLAGLGLPVLEVWGLSETTGAATVSTPDRF 396
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
VG +PG + + + +GE+ ++
Sbjct: 397 ATGAVGAAMPGVEVDVAE-----DGELLVR 421
>gi|198282537|ref|YP_002218858.1| AMP-dependent synthetase and ligase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198247058|gb|ACH82651.1| AMP-dependent synthetase and ligase [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 580
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 2/212 (0%)
Query: 207 YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACL 266
+ VR A+ L LG+ R V ++ N+ +W D + G +Y T SP
Sbjct: 44 FAGQVRARARGLLHLGVRRGERVILMAPNSVDWAIMDFAILNVGAITVPLYPTFSPREIH 103
Query: 267 HCLVTSDANICVVEDDKQLEKILKVKA-QCPKLKAIVQYEGKPDKPGVISWDELMELGRA 325
L S A + ++E + +++ + +++ G+ W L G
Sbjct: 104 FVLGDSGAGLILLEGAAEWQRLGGEGGWGVADDRILLRDAAAAQNAGLRHWASLENEGAT 163
Query: 326 APDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALS 385
PD L+ L + + T+VYTSGT G K VMLSH NI N + L A
Sbjct: 164 VPDSGLEERLAGLQRQQTATIVYTSGTTGWPKGVMLSHGNILSNIEGFLPLVPLH-AGQR 222
Query: 386 VISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
++S LPLSH+ + + + + +A++
Sbjct: 223 LLSILPLSHVFERGTGHFGAYLLGLEVAYAER 254
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L R L++ +++ +G R R +SG AP+ + R+F+ L +PI E +GM+E + +
Sbjct: 319 LTRRLLIRSLRKKLG-GRLRFFVSGGAPLDAGITRFFVDLGLPIVEGYGMTEASPVIAAN 377
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VGR +P + ++ +GEI ++
Sbjct: 378 PLEAIHPGTVGRFLPNLEGRLA-----ADGEILVR 407
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 398 QTVDIYSVMTVAATLWFADKNALK---VYKATQAAIDRANLKSISNA-------QKIQKF 447
Q V M L F ++ LK V A +AA +A K+I+ A +++++F
Sbjct: 480 QAVVFGDRMPYLVALIFPNQEVLKARAVDHADEAATRKAVQKAIATALADLPSHEQVKRF 539
Query: 448 EFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKF 483
LP S GEL PT+KVKR V + Y +++ +
Sbjct: 540 ALLPEALSETNGELTPTLKVKRRVVAEHYAALLTQM 575
>gi|417950668|ref|ZP_12593786.1| long-chain-fatty-acid--CoA ligase [Vibrio splendidus ATCC 33789]
gi|342806130|gb|EGU41368.1| long-chain-fatty-acid--CoA ligase [Vibrio splendidus ATCC 33789]
Length = 602
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I +++ + T++ A L GL + I N P+W +D A+ A +Y TN+
Sbjct: 36 ISWQQFGQQIDTLSLALLAQGLRVQDKIGIYSNNMPQWTVADFAALQARLVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG---VISWDE 318
+ + +D I V + Q + + + +C +L+ +V D G +SW++
Sbjct: 96 AAQSSYIIQNADVKILFVGEQVQFDAAVSLFEECEQLEVVVAMSDDIDLQGHSFAVSWND 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
M G + D L ++ TL+YTSGT G K VML + N+ + +
Sbjct: 156 FMARGVESQQAEFDARLADANMDDLLTLIYTSGTTGQPKGVMLDYTNVGYQLEGHDERLS 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LTKDDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
+ ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y
Sbjct: 547 QELAKFEQVKKFKLLPKAFSMDDGELTPTQKLRRKVINDKYQDEIEEMY 595
>gi|297243445|ref|ZP_06927377.1| AMP-forming long-chain acyl-CoA synthetase [Gardnerella vaginalis
AMD]
gi|415709140|ref|ZP_11462873.1| long-chain-fatty-acid-CoA ligase [Gardnerella vaginalis 6420B]
gi|296888490|gb|EFH27230.1| AMP-forming long-chain acyl-CoA synthetase [Gardnerella vaginalis
AMD]
gi|388056554|gb|EIK79417.1| long-chain-fatty-acid-CoA ligase [Gardnerella vaginalis 6420B]
Length = 682
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++ VR AK + GL + +V + + EW +D + GG A +Y T+S E
Sbjct: 127 NQFLQEVRDAAKGLMHYGLRKGDAVAFMCKTSYEWDVTDAAVMACGGVLATIYDTDSAEQ 186
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELGR 324
+ + SD+ +VE +K +CP L+ I+ E G ++ EL G
Sbjct: 187 IRNIVNNSDSRFLIVETTDMRDKADGAIEECPSLERIICIE-----TGGLA--ELQAFGY 239
Query: 325 AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK--LESA 382
A DE LD ++++ + C++VYTSG+ A K V ++H++ A + Y L
Sbjct: 240 AVSDEELDARIDSVKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYLPNLLSEK 299
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATL 412
SV+ FLP +H A+ ++ + VA+TL
Sbjct: 300 DGSVLLFLPQAHSFARAIN---YIVVASTL 326
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 415 ADKNALKVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVK 474
A NA+ V Q ID AN + +S A+ ++KF LP +F+ G + +MK+ RP V+K
Sbjct: 609 AANNAV-VRAEVQKFIDLAN-EGVSRAESVRKFIILPEEFTQENGLMTASMKIIRPRVIK 666
Query: 475 KYQSIID 481
+Y ++++
Sbjct: 667 RYTTLLN 673
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG--AHT-VSA 171
L+ ++QA+G R R ++G AP+ EL +F +P+ E +G++E A T +
Sbjct: 410 LVYRPLRQALG-GRARWIVAGGAPLDPELLSFFRGAGVPVYEGYGLTETTAPCAFTPIGV 468
Query: 172 PDDFKLDGVGRTIPGTQTKIV-DPDEEGNGEICLKEYEANVRTVAKAFLKLG 222
P F+ VG P +I D + + G +Y N +F K G
Sbjct: 469 P--FREGSVGIAFPAFTLRIASDGEVQIKGTCVFHKYHKNDEATETSFTKDG 518
>gi|154490398|ref|ZP_02030659.1| hypothetical protein PARMER_00631 [Parabacteroides merdae ATCC
43184]
gi|423346882|ref|ZP_17324570.1| hypothetical protein HMPREF1060_02242 [Parabacteroides merdae
CL03T12C32]
gi|154089009|gb|EDN88053.1| AMP-binding enzyme [Parabacteroides merdae ATCC 43184]
gi|409219163|gb|EKN12127.1| hypothetical protein HMPREF1060_02242 [Parabacteroides merdae
CL03T12C32]
Length = 611
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 9/210 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I KE+ V AKA + G+E ++ + N P+ FY+D GA + MY TN
Sbjct: 35 KISWKEFSEKVMLTAKAMAEFGIEVQDNIGVYSQNMPQCFYTDFGAYANRVVSIPMYATN 94
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEG----KPDKPGVISW 316
SP + + + + V + Q KV+ + LK +V ++ P+ I +
Sbjct: 95 SPGQIEYIINDAHIHTLFVGEQLQYNNAFKVQKESQYLKRLVVFDPAVKLNPEDKTSIYF 154
Query: 317 DELMELGRAAPDESLDRVLETIATNE-CCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
D+ + LG A E+ ++ A E T++YTSGT G SK VML H N + A I
Sbjct: 155 DDFLRLGDNAHAETTVKIRTNEAVPEDLATIIYTSGTTGESKGVMLHHSN--YLEAMRIH 212
Query: 376 YFKLESAALSVIS--FLPLSHIAAQTVDIY 403
+L +S FLPL+HI + Y
Sbjct: 213 DIRLPMVTDKDLSMCFLPLTHIFEKAWSYY 242
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 87 AKSTSLQHYMAYLEKNVSEPY----TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTE 142
A T ++ + Y K++ P+ + + + + +K+ +G++R R AP+S
Sbjct: 303 AIETGRKYNLEYKNKSIPAPFGLKLKFEMYNKTVFNLLKRVLGIERGRFFPVAGAPLSDT 362
Query: 143 LKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEI 202
+ + S++IPI +G+SE F+ +G +P Q +I DP+ N EI
Sbjct: 363 VNEFLQSVNIPIVYGYGLSETTATVCFYPEIGFQFGSIGEVMPDVQVRI-DPE---NSEI 418
Query: 203 CLK 205
+K
Sbjct: 419 LVK 421
>gi|157368992|ref|YP_001476981.1| AMP-dependent synthetase and ligase [Serratia proteamaculans 568]
gi|157320756|gb|ABV39853.1| AMP-dependent synthetase and ligase [Serratia proteamaculans 568]
Length = 602
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 19/235 (8%)
Query: 198 GNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMY 257
G ++ ++ + ++ +A A L LG + + I N W +DL + G + +Y
Sbjct: 34 GESQLTWRQVDTHINRIASALLALGTDVQERIAIFANNCMAWSLADLAVLRLRGVSVPLY 93
Query: 258 TTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWD 317
TN+P + +D I V + QL+ + ++ CP+L I+ ++ D G
Sbjct: 94 ATNTPAQAAFIINDADIRILFVGEQAQLDAAIALRGVCPQLIHIIVFDDDADLRGCEIAQ 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECC-----TLVYTSGTEGASKPVMLSHDNITFNAAC 372
L RAA + + L+ +CC TL+YTSGT G K VML + N+
Sbjct: 154 HLSTFERAADLAAFESQLQQ-RIADCCLEDLFTLIYTSGTTGEPKGVMLDYRNLAAQ--- 209
Query: 373 IIQYFKLESAALSV------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
L L+V +SFLP+SH+ + + + + A ++ + + ++
Sbjct: 210 ----LYLHDGRLTVNEEDVSLSFLPMSHVFERAWSFFIMHSGAQNVFLPNTDWVR 260
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 432 RANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
R K ++ ++++KF LPA FS+ GEL PT+K++R ++++YQS ID Y
Sbjct: 546 REMQKELARFEQVKKFTLLPAAFSMELGELTPTLKLRRKVIMQRYQSEIDSMY 598
>gi|376261461|ref|YP_005148181.1| acyl-CoA synthetase [Clostridium sp. BNL1100]
gi|373945455|gb|AEY66376.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Clostridium
sp. BNL1100]
Length = 554
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 102/242 (42%), Gaps = 22/242 (9%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E+ VAK+FLK+G+++ V I N PEW + + G + T
Sbjct: 39 EFNELCNKVAKSFLKMGIKKGDHVAIWATNVPEWLITLFASAKIGAVLVTVNTNYKVFEL 98
Query: 266 LHCLVTSDANICVVEDD-KQLEKILKVKAQCPKLK----AIVQYEGKP-----------D 309
+ L SD N V+ D K I + CP+LK E P
Sbjct: 99 EYLLKQSDTNTLVLLDGFKDSNYIQIINELCPELKNSEPGSFHSEKLPYLKNIISVSTEK 158
Query: 310 KPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFN 369
PG+ SWD+++E GR DE L + ++ ++ + YTSGT G K VML+H NI N
Sbjct: 159 HPGMFSWDDIIEFGRDISDEELYNISNSLDCHDVINMQYTSGTTGFPKGVMLTHYNIINN 218
Query: 370 AACI--IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD-KNALKVYKAT 426
CI +F E + F H + I + +T T+ D + LKV A
Sbjct: 219 GMCIGDCMHFTHEDKLCIPVPFF---HCFGLVLAIMACVTHGTTMVPVDYYSPLKVMNAI 275
Query: 427 QA 428
Q+
Sbjct: 276 QS 277
>gi|422548906|ref|ZP_16624714.1| AMP-binding enzyme [Propionibacterium acnes HL050PA1]
gi|314919015|gb|EFS82846.1| AMP-binding enzyme [Propionibacterium acnes HL050PA1]
Length = 646
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 199 NGEICLKEYEANVRTVA---KAFL------KLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
G+ ++ Y R VA +AF+ + GL+R + + N PEW +DL +
Sbjct: 58 GGQWIIRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTI 117
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE---- 305
G +Y T++P+ +H + + + + K+L++IL+ + Q P L+ ++
Sbjct: 118 GVIPVPIYPTSTPDQIVHIVTDAVVRVIITAGPKELDRILEARDQMPGLETVILINPADQ 177
Query: 306 -GKPDKPGVISWDELMELGRAAPDESLDRVLETIATNEC----CTLVYTSGTEGASKPVM 360
G D V+S +++ + G + E + V+E C L+YTSGT G K VM
Sbjct: 178 VGDHDGLTVLSLEQVRQAGVS---EEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVM 234
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSH 394
+SH + +F + A S +SFLPLSH
Sbjct: 235 ISHRAALAELQALDAFFDVTPADHS-LSFLPLSH 267
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+L ++ A+G + V +G AP+ E++ +F + + +C+ +G++E + + ++P
Sbjct: 367 LVLKAIRDAIGGPKT-VLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPGG 425
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+K GR + G+Q + +GEI +
Sbjct: 426 YKFGTAGRPLVGSQMTTTE-----DGEILYR 451
>gi|86139741|ref|ZP_01058308.1| AMP-binding enzyme [Roseobacter sp. MED193]
gi|85823632|gb|EAQ43840.1| AMP-binding enzyme [Roseobacter sp. MED193]
Length = 615
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E +Y A+ R V + + LG II + EW ++DLG G G+Y T
Sbjct: 52 EFSWLDYYASARRVGCSLMALGYREGDVAAIISEDNKEWVFADLGIQCIGATTHGLYPTL 111
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY--EG----KPDKPGVI 314
+ + L S A + VED++QL+K L V+ Q L+ ++ + EG + DK VI
Sbjct: 112 QEKQVAYQLNDSGAKVLFVEDEEQLDKYLGVEDQLDHLEKVIVFDMEGLRSFQHDK--VI 169
Query: 315 SWDELMELGRAAPDE---SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAA 371
W+E + L A +E +R ++ + TL+YTSGT GA K +SH F A
Sbjct: 170 GWEEFLALSDAKIEELSVEFERRVDAGDPEDIATLIYTSGTTGAPKGAAMSH---RFFLA 226
Query: 372 CIIQYFKLE-SAALSVISFLPLSHIAAQTVDI 402
Y +L V++FLPL H A + + +
Sbjct: 227 QSDNYPELPLGPGDEVLTFLPLCHAAERILSV 258
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
++++ +L+L ++ +GL R +SGAAPIS L +F +L + + E +G +E G T
Sbjct: 346 HKVLDFLVLRNIRVELGLARAHTIVSGAAPISARLLSWFNALGVTVQEAYGQTET-GIVT 404
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ P + +GR + + K+ D +GEI ++
Sbjct: 405 ATIPGRSPIGSIGRAMRNVEAKLAD-----DGEILIR 436
>gi|455790029|gb|EMF41919.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 683
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
+A+A ++LGL+ V ++ N EW +D ++G T + + L S+
Sbjct: 46 LAEALIQLGLKAREHVGVLADNRLEWILTDYAVQFSGAVNVPRGTDVTESELEYILNHSE 105
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG--VISWDELMELG---RAAPD 328
A I +E+DK LEK KVK++ PK++ I+ + G + +L+E G RA
Sbjct: 106 AKIVFIENDKMLEKYNKVKSKVPKVETIIIMDKSSSAKGKNIHKIYDLVEEGRSLRAKGS 165
Query: 329 ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE-SAALSVI 387
+ ++ +E I + TL+YTSGT G K VML H N+ ++ E S++
Sbjct: 166 KKAEKRIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSML 225
Query: 388 SFLPLSHI 395
S LP+ HI
Sbjct: 226 SILPIWHI 233
>gi|332285836|ref|YP_004417747.1| AMP-binding protein [Pusillimonas sp. T7-7]
gi|330429789|gb|AEC21123.1| putative AMP-binding enzyme [Pusillimonas sp. T7-7]
Length = 658
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
E VRT+A LG+ V I+G N P + S + A G +Y +
Sbjct: 49 ELALQVRTLANGLAALGVRPGQHVAIVGENRPRLYLSMMAAQTIGAIPVPLYQDAVAQEM 108
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELME 321
L+ L ++ + VVED +Q++K+ + QCP L +V + + + ++S++ L++
Sbjct: 109 LYVLQDAEIRVAVVEDQEQVDKMFEASEQCPALAYVVYDDPRGLRNYQEDRLLSYERLLD 168
Query: 322 LG---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+G AA +D + I ++ + YTSGT G K VMLSH + + A IQ F+
Sbjct: 169 MGAEHAAAHPAYIDDAIAAIKPDDAAAMFYTSGTTGKPKGVMLSHHAL-IDRALAIQEFE 227
Query: 379 LESAALSVISFLP 391
+ V+++LP
Sbjct: 228 NLTDQEDVLAYLP 240
>gi|255531463|ref|YP_003091835.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
gi|255344447|gb|ACU03773.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
Length = 637
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 214 VAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSD 273
VA F++ G+ + + ++ N+PE+ Y D G G +Y T S + + + S
Sbjct: 52 VAAFFMEKGIVKGDRMGLMIENSPEYVYYDQGIQQIGAINVSIYPTLSEQEVAYIVNDSG 111
Query: 274 ANICVVEDDKQLEKILKVKAQCPKLKAIV------QYEGKPD--KPGVISWDELM-ELGR 324
++ + +KILK+ A C L+ IV Q P+ K +I +DE++ E G+
Sbjct: 112 MRAILIGNTFLYKKILKIAANCRNLEYIVPAFTEYQKVSIPEELKVQIIPFDEVLAETGK 171
Query: 325 AAPDE--SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
P + R+ TI + +L+YTSGT G K VMLSH N N +Q +
Sbjct: 172 LKPARLTEIGRIRNTILPADISSLIYTSGTTGTPKGVMLSHSNFVENVKVCLQQIPVIDE 231
Query: 383 ALSVISFLPLSHIAAQT 399
+ +SFLPLSH+ +T
Sbjct: 232 TETFLSFLPLSHVFERT 248
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L L+ SK+K+ G R + +SG A + + +F +L I I E FG++E + V+
Sbjct: 341 LAEKLVFSKIKEKTG-GRLKFMISGGAALPKNVGEFFGNLGIKILEGFGLTETSPVMAVT 399
Query: 171 APDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVC 230
VGR IPG + I D E I ++ ++ + A ++ + R H V
Sbjct: 400 EYHRQVYGTVGRIIPGIEVGI--QDIETRQMISIQTHDTFMEDFECAEGEI-IVRGHCVM 456
Query: 231 IIGFNAP----------EWFYS-DLGAIYAGGF 252
FN P WF++ D+G Y G
Sbjct: 457 QGYFNKPAETAEVIDKDNWFHTGDIGRFYRGNL 489
>gi|451971092|ref|ZP_21924314.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
gi|451932908|gb|EMD80580.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
Length = 602
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 9/226 (3%)
Query: 196 EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
EE G I ++ V ++ A L GL + I N P+W +D+ A+ G
Sbjct: 31 EEWQG-ITWTQFGQQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADIAALQLLGVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE-----GKPDK 310
+Y TN+ + + +D + V + Q + + + QC +L+ IV G+ D
Sbjct: 90 IYPTNTAAQSAYIIDNADVKVLFVGEQPQFDAAVSIFDQCEQLELIVAMSDDIELGEHD- 148
Query: 311 PGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
VISW + G LD LE ++ TL+YTSGT G K VML + NI
Sbjct: 149 -FVISWQAFVAKGDTTYQVELDARLEQAKDDDLLTLIYTSGTTGQPKGVMLDYANIAAQL 207
Query: 371 ACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L + +S + FLPLSH+ + Y + A + D
Sbjct: 208 EGHDQRLSLSQSDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPRAFSMDDGELTPTQKLRRKVINDKYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y L L+LSK++ +G + G A + + R+F ++ I + +GM+E
Sbjct: 324 SYALADKLVLSKLRALLG-GKINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
TVS DD F D +G ++PG Q KI + +E
Sbjct: 381 TVSCWDDKCFNPDSIGMSMPGAQVKIGENNE 411
>gi|183982085|ref|YP_001850376.1| long-chain-fatty-acid-CoA ligase, FadD11 [Mycobacterium marinum M]
gi|183175411|gb|ACC40521.1| long-chain-fatty-acid-CoA ligase, FadD11_1 [Mycobacterium marinum
M]
Length = 621
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ ++ V +A + LG+ V + EW D + AG +Y T
Sbjct: 50 VTWEQVGERVGRLAAGLISLGIAPQDRVALASSTRYEWVLVDFAVMCAGAATTTVYPTTI 109
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELME 321
+ + S + + V ED Q++K+++ +A+ P++ +V +GK D VI+ EL +
Sbjct: 110 AADVAYIVANSGSRVVVAEDQTQVDKLVEHRAELPEVARVVVIDGKGDGSWVITLAELEQ 169
Query: 322 LGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
LG+ A ++D+ + I ++ +L+YTSGT G K V L+H T+ A+ I
Sbjct: 170 LGKQLLADSPAAVDQRVAAIGPDQLASLIYTSGTTGRPKGVRLTHGAWTYTASAIDALNV 229
Query: 379 LESAALSVISFLPLSH 394
L A L+ + +LPL+H
Sbjct: 230 LGPADLNFL-WLPLAH 244
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L L+ S +++ G R R +S AA + + ++F ++ I + E +G++E A A
Sbjct: 339 YQLADRLVFSTIRERFG-GRIRFFVSAAAALDRNVAQWFDAIGITVLEGYGLTETAAASF 397
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
++ P+ ++ VG P T+ KI +GEI L+
Sbjct: 398 INRPNAYRFGTVGWPFPATEAKIAT-----DGEILLR 429
>gi|426405050|ref|YP_007024021.1| long-chain fatty acid CoA ligase (AMP-binding) [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425861718|gb|AFY02754.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 593
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 9/221 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E EY +++ V A L LG++ V I+ EW +DLG +Y N
Sbjct: 34 EKSWNEYYSDIEAVGCALLSLGIKPGDRVAIMANTRLEWSTTDLGIFGIKAITVPIYQNN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
+ + + L S++ I + E L+ VKA+CPK++ ++ ++ P I+W +L+
Sbjct: 94 TADDVEYILNNSESRILICESRGPLKTFESVKAKCPKVEKVIVFDETCPNPEAITWPKLL 153
Query: 321 ELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++G+ A + ++ + T++YTSGT G K V+++H + + + F
Sbjct: 154 QMGKDYLAKHPSQFQELCASLTQEDIATILYTSGTTGRPKGVVMTHLQAI---SEVSEAF 210
Query: 378 KLESA--ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L A A + +SFLP +HI + ++ + + TL FA+
Sbjct: 211 PLCGATEADTSLSFLPYAHILGR-IEHWGHAYIGFTLAFAE 250
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 99/238 (41%), Gaps = 46/238 (19%)
Query: 70 VTYKLQTTGVKRWIANYAKSTSLQ---HYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGL 126
VT ++QT +K I N+A + + M+ + Y L + L+L K+ A G
Sbjct: 281 VTAQIQTQPLKMKIFNWALEVGTKVGDYKMSGQVLPLDLLVKYELAKKLVLDKIPTAFG- 339
Query: 127 DRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPG 186
R R ++SG API E+ +F + + I E +G++E A TV+ P ++K VGR I
Sbjct: 340 GRLRFAISGGAPIPREIALFFHAAGVLILEGYGLTETTAAITVNTPFNYKFGSVGRPIGE 399
Query: 187 TQTKIVDPDEEGNGEI------CLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWF 240
+ KI + +GEI +KEY N +AF WF
Sbjct: 400 VKLKIAE-----DGEIMVKSDKVMKEYYKNPEATKEAF-----------------TDGWF 437
Query: 241 YS-DLGAIYAGG-------------FAAGMYTTNSPEACLHCLVTSDANICVVEDDKQ 284
++ D+G I GG A G Y L L AN+ V D K+
Sbjct: 438 HTGDIGEILPGGDLKITDRKKDLIKTAGGKYVAPQRLEGLLSLSPYIANVLVHGDQKK 495
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 414 FADKNALK----VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR 469
++D N+L V + + A+ N + +++ + I+K+ LP +F++ GEL P++KVKR
Sbjct: 519 YSDWNSLVQSPFVAELIRKAVAETNTQ-LASFESIKKYIILPNEFTVEGGELTPSLKVKR 577
Query: 470 PFVVKKYQSIIDKFY 484
+ ++Y+ I++ Y
Sbjct: 578 KVLDQRYKEKIEELY 592
>gi|453382146|dbj|GAC83353.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 612
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 14/148 (9%)
Query: 67 WKKVTYKLQ------TTGVKRWIANYAKSTSLQHYMAYL---EKNVSEPYTYRLVRWLIL 117
W+K+ ++ T+ VK+ +A +A + A L E V + + L LIL
Sbjct: 276 WQKIRAGIEARLGEETSPVKKALAGWALGMGTKAADARLAGRELGVLDRIGHELADRLIL 335
Query: 118 SKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKL 177
KV+ A+GLD + SGAA I E+ +YFL L +P+ EV+GMSE G T++ PDD K+
Sbjct: 336 HKVRAALGLDEVDFAGSGAAAIPLEVLKYFLGLGLPVLEVWGMSETTGVSTMTTPDDLKI 395
Query: 178 DGVGRTIPGTQTKIVDPDEEGNGEICLK 205
VG+ I G + K+ + +GE+ ++
Sbjct: 396 GTVGKPIRGIEVKLAE-----DGELLVR 418
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 18/217 (8%)
Query: 188 QTKIVDPDE------EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
QT V PD G +I EY V +A LG+ R ++ I+ N PE+
Sbjct: 26 QTITVRPDAVAIRTVAGTRQITWSEYGTRVEAIAGGLAALGISRGDTIGIMLTNRPEFHL 85
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D A++ G +Y T+SP+ + L + N V+ + L I + K I
Sbjct: 86 VDTAALHLGAIPFSIYNTSSPD-QVEYLFGNAGNKVVITEQAFLPVITSAASGIEK---I 141
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVML 361
+ +G D +S +E+ L A + + + ++ TL+YTSGT G K V +
Sbjct: 142 ILVDGDTD--ATLSLEEVERLASPAGFD-FAASWQAVEPDDLATLIYTSGTTGPPKGVEI 198
Query: 362 SHDNITFNAACIIQYFKLESAALS--VISFLPLSHIA 396
+H NI A + A IS+LP +HIA
Sbjct: 199 THRNIIAELASLADIV---DAGFDDRAISYLPAAHIA 232
>gi|351731916|ref|ZP_08949607.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 599
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 9/219 (4%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
+Y LGL V +I N EW + +GA G G+Y T+
Sbjct: 40 QYHQRASHFGLGLRALGLPAGGHVGVISENRIEWVLAQMGAGLVGAVTVGVYPTSPTNEV 99
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK------PD-KPGVISWDE 318
+ + +D I V ED +Q +K+L + P+LK IV E K P+ + + ++DE
Sbjct: 100 AYVVGHADIEIMVCEDQEQTDKLLAALPELPRLKKIVVMETKGLRSFAPEVRQFITTFDE 159
Query: 319 LMELGRAAPDES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+ +LG A+ ++ +D L ++ ++YTSG+ G K M+S+ NI I+
Sbjct: 160 VEQLGAASGQQTIIDDALARQRLDDVGLMIYTSGSTGKPKGAMISYRNIRGVVPGIMDRL 219
Query: 378 KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+L S + +S+LPL H+A Q + + + + + + F +
Sbjct: 220 EL-SRETTHLSYLPLCHVAEQMLTSFVPVYIGSQVNFGE 257
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
TY WL+ ++ +GL V+L+GAAPI ++ R+F L +P+ EV+G++E G
Sbjct: 328 TYAASYWLVFRALQNFIGLRNAHVALTGAAPIPPDVVRFFRVLGVPLIEVYGLTESTGMV 387
Query: 168 TVSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEY----EANVRTVAKAFLKLG 222
T D + VG G + +I D E + GE+ Y EA ++ +L G
Sbjct: 388 TGHRLDHVVVSTVGVPTLGVEHRIADNGELQIKGEMVFAGYYKNPEATASSIVGGWLHTG 447
>gi|238791159|ref|ZP_04634798.1| long-chain-fatty-acid--CoA ligase [Yersinia intermedia ATCC 29909]
gi|238729292|gb|EEQ20807.1| long-chain-fatty-acid--CoA ligase [Yersinia intermedia ATCC 29909]
Length = 650
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 4/228 (1%)
Query: 197 EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGM 256
EG ++ ++ + +V ++ A L LG+ + I N+ W +DL + G + +
Sbjct: 84 EGEQQLSWQQVDTHVTQISAALLSLGVAIQERIGIFANNSMTWSLADLAILQLRGVSVPL 143
Query: 257 YTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISW 316
Y TN+ + L +D I V Q + +K CP+L I+ + D G
Sbjct: 144 YATNTSAQAAYVLNDADVRILFVGGQTQFDVAATLKPLCPQLAQIIVLDPTVDLRGCEYA 203
Query: 317 DELMELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACI 373
L + + A L +++ N+ TL+YTSGT G K VML + N+
Sbjct: 204 QHLADFEQQPDAVQQHLLTARIDSCDLNDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLH 263
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
Q L + +S +SFLPLSH+ + Y + T A ++ ++ + ++
Sbjct: 264 DQRLTLTAEDVS-LSFLPLSHVFERAWSFYVMHTGAQNVYISNTDWVR 310
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ +++++F LP F++ TGEL PTMK++R ++++YQ+ ID Y
Sbjct: 600 KELALFEQVKRFTLLPQAFTMETGELTPTMKLRRKIILQRYQNEIDSMY 648
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y+L L+LSK++ +G R R + A + + +F ++ I I +GM+E +
Sbjct: 378 YKLADRLVLSKLRGVLG-GRVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVS 436
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLG 222
DF+ +G+ +PG ++ +E + G I ++ Y + A++F + G
Sbjct: 437 CWEEQDFRFGSIGKPLPGIDVRLGAENEIQVRGPIVMRGYFNKPQETAESFTEDG 491
>gi|219685238|ref|ZP_03540058.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
gi|219673334|gb|EED30353.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
Length = 645
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 206 EYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEAC 265
++ V+ VA L G++R V II + EW D+ + G +S +
Sbjct: 39 DFWNEVKRVASGLLHYGIKRGEKVVIISDSRREWVIIDIATLGLGCVDVPRGNDSSEDEL 98
Query: 266 LHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIV------QYEGKPDKPGVISWDEL 319
+ + S++ VE++KQL+K+L K +K IV YE K + S+ +L
Sbjct: 99 AYIINHSESTFIFVENNKQLQKVLSKKHDLRLVKCIVVIDDDKSYEEKMGTIAIFSYKKL 158
Query: 320 MELG----RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
+ELG RA P +S D +E ++ + T++YTSGT G K VML H++ F +
Sbjct: 159 LELGAEHLRANP-KSFDIEIEKGSSKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYD 217
Query: 376 YFKLESAALSVISFLPLSH 394
Y +IS LPL H
Sbjct: 218 YLPEIKPGKIMISILPLWH 236
>gi|390440993|ref|ZP_10229181.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
gi|389835698|emb|CCI33307.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
Length = 639
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 12/218 (5%)
Query: 193 DPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
DP + + +E ++ A A LG+ +V + N+P WF +D G++ AG
Sbjct: 32 DPHSKPEVILTYRELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAA 91
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
A E + L SD+ +VE++K L K+L + P LK IV + G
Sbjct: 92 NAVRSAQADAEELAYILADSDSQTLIVENNKTLGKLLTKIPELP-LKLIVLLTDEDPATG 150
Query: 313 VIS-----WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNIT 367
IS + +LM +G + +L + T + N+ TL+YTSGT G K VMLSH N+
Sbjct: 151 AISVQTLNFKQLMAIG---AENTLKPI--TKSENDLATLIYTSGTTGQPKGVMLSHGNLL 205
Query: 368 FNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSV 405
+ F+ E V+S LP H ++ + +S+
Sbjct: 206 HQVRNLNAIFQPEPGD-RVLSILPSWHSYERSCEYFSL 242
>gi|383457070|ref|YP_005371059.1| putative long-chain-fatty-acid--CoA ligase [Corallococcus
coralloides DSM 2259]
gi|380732726|gb|AFE08728.1| putative long-chain-fatty-acid--CoA ligase [Corallococcus
coralloides DSM 2259]
Length = 622
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
+V ++ + G++ V I + W +DL A +Y +N+ E C + L
Sbjct: 56 DVMLMSAGLIAQGVQPGDRVAIFANTSLNWLIADLAISGAQAVTVPIYASNTAEECRYIL 115
Query: 270 VTSDANICVVEDD----KQLEKILKVKA---QCPKLKAIVQYEGKPDKPGVISWDELMEL 322
S+ + +V+ D KQ+ ++ +V+A + P L+ IV +EG ++ +++
Sbjct: 116 NHSETKLLLVDSDEKDAKQIGRLSRVRARLGEIPSLQKIVVFEGPVSGEKEMTLADMLAS 175
Query: 323 GRAAPD---ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKL 379
R PD E+ +R + + + L+YTSGT G K V+L+H N + A Q L
Sbjct: 176 ARGGPDASREAFERRVGEVKLEDTNLLIYTSGTTGDPKGVILTHGNWAYEAKA-TQAMSL 234
Query: 380 ESAALSVISFLPLSHIAAQTV 400
SV+ FLPL+H+ AQ V
Sbjct: 235 MVPNDSVMLFLPLAHVFAQVV 255
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 109 YRLVRWLILSKVKQAMGLD---RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
+ L + L+ SKV++ + R+ +SG AP+S ++ +F LD + E +G++E +
Sbjct: 341 FALAKKLVFSKVRKVLDEKLGGNMRIFISGGAPLSRKIAYFFDMLDYKVLEGYGLTETSA 400
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
V+ + K+ VG +PGT+ KI +GEI ++
Sbjct: 401 PCNVNRVEKIKIGTVGPPMPGTEIKIA-----ADGEIMVR 435
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 444 IQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
I+K + ADF+ +GEL PT+KVKR +KY ID Y+
Sbjct: 575 IKKIAVMDADFTQESGELTPTLKVKRKVASQKYIKTIDAMYE 616
>gi|406832257|ref|ZP_11091851.1| AMP-dependent synthetase and ligase [Schlesneria paludicola DSM
18645]
Length = 563
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 26/252 (10%)
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF 234
FK+DG+ R I +Y VA ++LG++ + ++
Sbjct: 28 FKVDGMWR------------------HISWNDYRRQADEVAAGLMELGVKPGDRIALLSE 69
Query: 235 NAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQ 294
N EW +D + G F ++ ++P L S A V+ QLEK+L VK+Q
Sbjct: 70 NRWEWLVADHAILSTGAFDVPIHAPSTPAQIQFQLEHSGACGVVLSSVAQLEKVLSVKSQ 129
Query: 295 CPKLKAIVQYE----GKPDKPGVISWDELMELGRAAPDESLDRVL---ETIATNECCTLV 347
P L+ V ++ D+ ++D + + G A D + I ++ T++
Sbjct: 130 LPDLRFAVIFDRCAATPSDQLTTYTFDAIRQSGVRAGDAGRKEIAAREAAITADDVATVI 189
Query: 348 YTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMT 407
YTSGT K VMLS N+ N+ + + + + +++LP SH+ A+ VD YS
Sbjct: 190 YTSGTTNRPKGVMLSQGNLVTNSKAGAEAYGFDCTRV-WLNWLPFSHVFARLVDDYSTTR 248
Query: 408 VAATLWFADKNA 419
+ T+ A +A
Sbjct: 249 MGVTMALATSSA 260
>gi|421483762|ref|ZP_15931335.1| AMP-binding protein [Achromobacter piechaudii HLE]
gi|400198045|gb|EJO31008.1| AMP-binding protein [Achromobacter piechaudii HLE]
Length = 658
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 8/189 (4%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
+VR VA LG+ V +IG N P + + + A G +Y + ++ L
Sbjct: 54 HVRHVANGLASLGIRPGMHVAVIGENRPRLYMAMMAAQSLGAIPVPLYQDAVAQEMVYVL 113
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDK----PGVISWDELMELGR- 324
++ ++ VVED +Q++K+L+V+ QCP LK +V + + + P ++S+++L LG+
Sbjct: 114 QDAEISVAVVEDQEQVDKMLEVREQCPALKHVVFDDPRGLRHYADPMLLSYEKLETLGQE 173
Query: 325 --AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
A + LDR + + ++ + YTSGT G K V+L+H + A + KL
Sbjct: 174 YAAQHADYLDRAIAAVQPHDPAAMFYTSGTTGKPKGVVLTHHALIDRARAVSDMEKLTDQ 233
Query: 383 ALSVISFLP 391
V+++LP
Sbjct: 234 E-DVLAYLP 241
>gi|402831663|ref|ZP_10880340.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
gi|402281050|gb|EJU29742.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
Length = 592
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFN-APEWFYSDLGAIYAGGFAAGMYTTNSPE 263
KEY + V++A L+LG++ + ++ N EW D+ + G +Y T E
Sbjct: 38 KEYVEKINQVSRALLRLGVKPKDKIAMVSSNNRTEWHILDMAIMQIGAHNVPIYPTIPKE 97
Query: 264 ACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELMELG 323
++ ++ C V D EK+ + ++ P ++ I+ ++ + G W E++ LG
Sbjct: 98 DYIYIFNHAEIKYCFVSDKDLWEKVSSIASEIPTMEEILSFDPIENIRG---WQEILSLG 154
Query: 324 RAAPDESLDRVLET-IATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESA 382
+++ L+ I + T++YTSGT G K VMLSHDNI N ++ A
Sbjct: 155 EDPENQAQVEALKAQIQPTDMATIIYTSGTTGKPKGVMLSHDNILSNIKNCHSRVPIK-A 213
Query: 383 ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+ +SFLP+ HI + + Y L+FA+
Sbjct: 214 GDTCLSFLPVCHIFERML-TYLYQYNGIRLYFAE 246
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V + I+R N K + ++++ F+ P ++SI G L PT+K+KR +++KY+ +
Sbjct: 526 RVRERIGQEIERIN-KRLGKWEQVKVFDLTPDEWSIDAGHLTPTLKLKRRIILEKYKDMY 584
Query: 481 DKFYD 485
+ FY+
Sbjct: 585 NTFYN 589
>gi|434399935|ref|YP_007133939.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
gi|428271032|gb|AFZ36973.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
Length = 640
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 10/239 (4%)
Query: 186 GTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLG 245
G + DP + +I +E + A LG++ + V + N+P WF +D G
Sbjct: 26 GNTIALDDPHAQPEVKITYQELSVKINQFAAGLQALGVQPFAKVALFADNSPRWFIADQG 85
Query: 246 AIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYE 305
+ AG + L+ L SD++ VVE+ K L K+ A P ++ +
Sbjct: 86 IMMAGAANVVRSANAEQQELLYILEHSDSSALVVENLKTLNKLGSSVADLPIELIVLLSD 145
Query: 306 GKPDKP---GVISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLS 362
P ++++++LME G+ + SL V +T TL+YTSGT G K MLS
Sbjct: 146 ETPQSELSIQIVNFEQLMETGK---NHSLQPVQQT--KENLATLIYTSGTTGKPKGAMLS 200
Query: 363 HDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
H N+ + K + V+S LP H ++ + Y + TL++ + +LK
Sbjct: 201 HGNLLHQVNNLTSIIKADVGD-RVLSILPSWHAYERSAE-YFLFAQGCTLYYTNLRSLK 257
>gi|422302727|ref|ZP_16390086.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
gi|389787971|emb|CCI16697.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
Length = 639
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 193 DPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGF 252
DP + I +E ++ A A LG+ +V + N+P WF +D G++ AG
Sbjct: 32 DPHSKPEVIITYRELYQQIQQFAAALQALGVTETENVALFADNSPRWFIADQGSMAAGAA 91
Query: 253 AAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG 312
A E + L SD+ +VE++K L K+L + P LK IV + G
Sbjct: 92 NAVRSAQADAEELAYILADSDSQTLIVENNKTLGKLLAKIPELP-LKLIVLLTDEDPATG 150
Query: 313 VIS-----WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNIT 367
IS + +LM +G + +L + T + N+ TL+YTSGT G K VMLSH N+
Sbjct: 151 AISVQTLNFKQLMAIG---AENTLKPI--TKSENDLATLIYTSGTTGQPKGVMLSHGNLL 205
Query: 368 FNAACIIQYFKLESAALSVISFLPLSH 394
+ F+ E V+S LP H
Sbjct: 206 HQVRNLNAIFQPEPGD-RVLSILPSWH 231
>gi|37678678|ref|NP_933287.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
gi|37197418|dbj|BAC93258.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
Length = 616
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I K++ + ++ A L G+E + I N P+W +D A+ +Y TN+
Sbjct: 51 ISWKQFGQQIDELSLALLAQGIEVQDKIAIFSNNMPQWTVADFAALQLRAVTVPIYPTNT 110
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPGVISWDE 318
+ L +D + V + Q + +K+ +C +L IV D I W
Sbjct: 111 AAQAAYILQNADVKVLFVGEQPQFDAAVKIFDECEQLNLIVAMSDDIDLGEHHFAIHWKA 170
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
++ G+ L+R LE + TL+YTSGT G K VML + NI +
Sbjct: 171 FIQQGQQEARAELERRLEQANFEDLLTLIYTSGTTGQPKGVMLDYSNIAAQLEGHDRRLS 230
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + + D
Sbjct: 231 LTENDVS-LCFLPLSHVFERAWTFYVLYKGGTNCYLQD 267
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y
Sbjct: 562 KELAKFEQVKKFKLLPKAFSMDEGELTPTQKLRRKVINDKYQDEIEEMY 610
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSK++ +G G A + + R+F ++ I + +GM+E T+S DD
Sbjct: 346 LVLSKLRALLG-GNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA--TISCWDD 402
Query: 175 --FKLDGVGRTIPGTQTKIVDPDE 196
F D +G ++PG Q KI + +E
Sbjct: 403 KCFNPDSIGMSMPGAQVKIGENNE 426
>gi|269964650|ref|ZP_06178888.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
gi|269830549|gb|EEZ84770.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
Length = 602
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 5/224 (2%)
Query: 196 EEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAG 255
EE G I ++ V ++ A L GL + I N P+W +D+ A+
Sbjct: 31 EEWQG-ITWTQFGQQVDALSLALLAQGLGVQDKIGIFSNNMPQWTIADIAALQLRSVTVP 89
Query: 256 MYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPG 312
+Y TN+ + + +D + V + Q + + + QC +L+ IV D
Sbjct: 90 IYPTNTAAQSAYIINNADVKVLFVGEQPQFDAAVSIFDQCEQLELIVAMSDDIELGDHDF 149
Query: 313 VISWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC 372
VISW + G A LD L+ ++ TL+YTSGT G K VML + NI
Sbjct: 150 VISWQAFVAKGDAIYQVELDARLDQAKEDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEG 209
Query: 373 IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
Q L + +S + FLPLSH+ + Y + A + D
Sbjct: 210 HDQRLSLSQSDVS-LCFLPLSHVFERAWTFYVLYKGATNCYLQD 252
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ GEL PT K++R + KYQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPRAFSMDDGELTPTQKLRRKVINDKYQDEIEEMY 595
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
+Y L L+LSK++ +G + G A + + R+F ++ I + +GM+E
Sbjct: 324 SYALADKLVLSKLRALLG-GQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE 196
TVS DD F D +G ++PG Q KI + +E
Sbjct: 381 TVSCWDDKCFNPDSIGMSMPGAQVKIGENNE 411
>gi|448474660|ref|ZP_21602519.1| AMP-dependent synthetase and ligase [Halorubrum aidingense JCM
13560]
gi|445817967|gb|EMA67836.1| AMP-dependent synthetase and ligase [Halorubrum aidingense JCM
13560]
Length = 709
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 31/257 (12%)
Query: 191 IVDPDEEGN-GEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYA 249
++ P + G ++ E A VR +A F +G++ V + EW +D A+ A
Sbjct: 62 VLSPADAGEYADVTYAEMRAIVRRLAAGFRAIGVDADTRVALYAQTRMEWAQTDFAALAA 121
Query: 250 GGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCP-KLKAIVQYE--- 305
G +Y ++SP + L +A + V E+ L+++L V P ++ A+V ++
Sbjct: 122 GATVTTVYASSSPSQVRYLLADPEATVVVAENRDLLDEVLAVVDDLPHEVDAVVTFDDVD 181
Query: 306 ---------------GKPDKPGVISWDELMELGRAAPDE-SLDRVLETIATNECCTLVYT 349
D V + E+ ELG A D+ + + ++ I ++ +L+YT
Sbjct: 182 REDLDVGADAGAAGASSLDADDVYTLGEVHELGADAFDQATYESWIDAIDLDDLASLIYT 241
Query: 350 SGTEGASKPVMLSHDNITFNAACIIQYFKLE----------SAALSVISFLPLSHIAAQT 399
SGT G K V L+H N N + + F SAA + +SFLPL+H+ +
Sbjct: 242 SGTTGQPKGVRLTHANFRDNVSQCYRRFADRPDRDPETPGISAASTTLSFLPLAHVFERM 301
Query: 400 VDIYSVMTVAATLWFAD 416
Y + AT+ +A+
Sbjct: 302 AGHYMMFAAGATVGYAE 318
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L L+ S V++A+G + +SG +S EL + ++D+PI E +G++E + V+
Sbjct: 389 LADALVFSSVREAIGGN-VDFFISGGGSLSAELCALYHAMDLPILEGYGLTETSPVICVN 447
Query: 171 APDDFKLDGVGRTIPGTQTKI 191
P++ K+ +G + T+ I
Sbjct: 448 PPEEPKVGTIGPPVVDTEIAI 468
>gi|417843442|ref|ZP_12489516.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
gi|341949585|gb|EGT76188.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
Length = 602
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 38/309 (12%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
+I K ++ + +++A L + + I N W +D+ + +Y TN
Sbjct: 34 DISWKNFQEQLNQLSRALLAHNIGVQDKIAIFAHNMERWTIADIATLQIRAITVPIYATN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGK---PDKPGVISWD 317
+ + L +D I V D +Q ++ L++ C +L+ IV + P +W+
Sbjct: 94 TAQQAEFILNHADVKILFVGDQEQYDQALEIAHHCSQLQKIVAMKSTIQLQQDPLSCTWE 153
Query: 318 ELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
+E G A + L + L ++ T++YTSGT G K VML + N+
Sbjct: 154 SFIETGSNAQQDELTQRLNQKQFSDLFTIIYTSGTTGEPKGVMLDYANLA---------H 204
Query: 378 KLESAALSV--------ISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK-----VYK 424
+LE+ LS+ +SFLP SHI + Y + A + D N ++ +
Sbjct: 205 QLEAHDLSLNVTDRDISLSFLPFSHIFERAWAAYILHRGAILCYLEDTNQVRSTLTEIRP 264
Query: 425 ATQAAIDR-------ANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKR---PFVVK 474
A+ R A L + A K+++ F ++I G+ ++ PF++K
Sbjct: 265 TLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMF---HWAISVGQKHFDLRANNKAIPFLLK 321
Query: 475 KYQSIIDKF 483
K ++ DK
Sbjct: 322 KQFALADKL 330
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFYD 485
K +++ ++++KF L FSI GE+ PT+K++R ++++Y+ I+ Y+
Sbjct: 546 KELAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEDMYN 595
>gi|442320394|ref|YP_007360415.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus stipitatus
DSM 14675]
gi|441488036|gb|AGC44731.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus stipitatus
DSM 14675]
Length = 620
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 108/212 (50%), Gaps = 11/212 (5%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ + +V+ ++ + LG++ V + + +W +DL A +Y++N
Sbjct: 45 DVSFSQVLEDVKVLSAGLVALGVKPGDRVSLFANTSLQWIVADLAITAAQAIMVPVYSSN 104
Query: 261 SPEACLHCLVTSDANICVVEDD----KQLEKILKVK---AQCPKLKAIVQYEGKPDKPGV 313
P+ + + S+++ V++D KQ ++ +V+ A+CP ++ ++ +EG
Sbjct: 105 IPDEVAYVVNHSESSFVFVDNDEKDAKQAGRLTRVRQKLAECPTVQKVIVFEGAVAGEQE 164
Query: 314 ISWDELMELGRAAPDE---SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
+S +++ GR A + D + ++ +++ +VYTSGT GA K +L+H N T+ A
Sbjct: 165 VSLADVVAKGREAHQANPAAFDERVASVKSDDTYCIVYTSGTTGAPKGTLLTHGNWTYQA 224
Query: 371 ACIIQYFKLESAALSVISFLPLSHIAAQTVDI 402
+ +E + SV+ FLPL+H+ AQ +
Sbjct: 225 QAVRAIGMMEPSD-SVMLFLPLAHVFAQVAKV 255
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 109 YRLVRWLILSKVKQAMGLD---RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAG 165
+ L + L+ +KV+ + R+ +SG AP+S ++ +F L + E +G++E +
Sbjct: 339 FTLAKKLVFTKVRATLDEKLGGNMRLFVSGGAPLSRKIAYFFDLLGFKVVEGYGLTETSA 398
Query: 166 AHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ P+ K+ VG +PGT+ KI +GE+ ++
Sbjct: 399 PCNANRPNKIKIGSVGPPMPGTEVKIA-----ADGEVLVR 433
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V++A +A + + N + A I++F + ADF+ TGEL PT+KVKR +K+++ I
Sbjct: 551 EVHEAVKAVMAKVNSEQPPYAT-IKRFTIMSADFTQETGELTPTLKVKRKVCSQKFKAQI 609
Query: 481 DKFYD 485
D YD
Sbjct: 610 DAMYD 614
>gi|289574233|ref|ZP_06454460.1| fatty-acid-CoA ligase fadD11 [Mycobacterium tuberculosis K85]
gi|289538664|gb|EFD43242.1| fatty-acid-CoA ligase fadD11 [Mycobacterium tuberculosis K85]
Length = 647
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 188 QTKIVDPDE------EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T ++DPD GN + ++Y A VR VA LG+ R +V ++ N E++
Sbjct: 55 RTAVMDPDAVALRTPGGNQTMTWRDYAAQVRRVAAGLAGLGVRRGDTVSLMMANRIEFYP 114
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA + G + +Y T E + + + + E + + +V+A ++ I
Sbjct: 115 LDVGAQHVGATSFSVYNTLPAEQLTYVFDNAGTKVVICEQ----QYVDRVRASGVPIEHI 170
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLD--RVLETIATNECCTLVYTSGTEGASKPV 359
V +G P PG +S L +L AA + D + + TL+YTSGT G K V
Sbjct: 171 VCVDGAP--PGTLS---LTDLYAAASGDFFDFESTWRAVQPEDIVTLIYTSGTTGNPKGV 225
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
++H N+ F I + + V SFLP +HIA + +Y
Sbjct: 226 EMTHANLLFEGYAIDEVLGIRFGD-RVTSFLPSAHIADRMTGLY 268
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSK+++ +G R +LSGAAPI E +F + IPI E++GMSE + T S P D
Sbjct: 362 LVLSKLRERLGFGELRWALSGAAPIPKETLAFFAGIGIPIAEIWGMSELSCVATASHPRD 421
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAF 218
+L VG+ +PG Q KI + E G + +K Y A+A
Sbjct: 422 GRLGTVGKLLPGLQGKIAEDGEYLVRGPLVMKGYRKEPAKTAEAI 466
>gi|281339762|gb|EFB15346.1| hypothetical protein PANDA_017636 [Ailuropoda melanoleuca]
Length = 472
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 71 TYKLQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWLILSKVKQAMGLDRCR 130
T +L +T +R I +A L+ + + P + L + L ++ ++ +GL CR
Sbjct: 140 TSQLSSTPFRRRIDQWAMWLGLKTNRKRMLRQTHAPLCFGLAKRLTFNQARRFLGLHHCR 199
Query: 131 VSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK 190
+ +S YFLSL++PI E++G+SE G HT+S DF+L G+++P T TK
Sbjct: 200 QYFNLGLGLSRATLDYFLSLNMPIFELYGLSESTGIHTLSRQQDFRLLSCGKSLPSTHTK 259
Query: 191 IVDPDEEGNGEICL-----------KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEW 239
DEEG G+I + E + A+ +L G +GF P+
Sbjct: 260 TQKEDEEGIGDIYIWGRNVFMGYLDDEENTQAKIDARGWLHTG--------DLGFMDPDE 311
Query: 240 FYSDLGAIYAGGFAAGMYTTNSPE 263
F +Y G A + T +S E
Sbjct: 312 F------LYVVGNARDIITLSSGE 329
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 316 WDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQ 375
W ++L +++LDRV+++ N+CC LVY+ G K +MLSHDNIT+ Q
Sbjct: 1 WRGFLDLADGVSEDTLDRVIDSQKPNQCCALVYSLSATGPPKAMMLSHDNITWTTVATAQ 60
Query: 376 YFKLE---SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADKNALK 421
++S+LPLS++ AQ D++ ++VA L+FA +AL+
Sbjct: 61 RLSYRCPPEEQEVLVSYLPLSYMGAQLFDMWVSISVAGALYFAQPDALR 109
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V + ID AN + +S++ KI K+ L DFSI GELG T K+KR V + YQ+ I+
Sbjct: 410 VLEFISQGIDAANAEVVSSSAKIIKWAILRTDFSIAGGELGATTKLKRAMVARIYQAEIE 469
Query: 482 KFY 484
Y
Sbjct: 470 SLY 472
>gi|448737723|ref|ZP_21719758.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
gi|445803279|gb|EMA53577.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
Length = 643
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
V+ +A F LG+E V + EW +D + AGG +YT++SP+ + L
Sbjct: 73 VKRLAAGFRSLGIEAGDRVGLFANTRMEWAQTDFAVLAAGGVVTTVYTSSSPDQVEYLLD 132
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY---EGKPDKPGVISWDELMELGRAAP 327
A VVE+ + LE++L V+ + L +V EG D+ V++ ++ E G +
Sbjct: 133 DPGATGVVVENQELLERVLAVEDEL-DLDFVVSMDSIEGYGDREDVLTLAQVHERGVGSF 191
Query: 328 DES-LDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLE------ 380
++S + L+ ++ +LVYTSGT G K V L+H N N + + F
Sbjct: 192 EQSDYEGWLDARDPDDLASLVYTSGTTGQPKGVRLTHRNFKANVDQVYRRFGPREDKGDL 251
Query: 381 ---SAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
+S +SFLPL+H+ + + + A++ +A+
Sbjct: 252 PTIDPDVSTLSFLPLAHVFERLAGHFLMFAAGASVAYAE 290
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L L+ +V++ +G + +SG +S EL R F + +PI E +G++E A V+
Sbjct: 361 LADRLVFEQVREGVGGN-IEFFISGGGSLSPELGRLFDGMGLPILEGYGLTETAPVVAVN 419
Query: 171 APDDFKLDGVGRTIPGTQTKI---VDPDE-EGNGEI 202
P+ ++ +G + + K+ V PD+ + +GE+
Sbjct: 420 PPEAPEIGTIGPPVVDEEVKVDASVVPDDLDADGEV 455
>gi|197121397|ref|YP_002133348.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. K]
gi|196171246|gb|ACG72219.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. K]
Length = 606
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 4/205 (1%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P G + + EA VR ++ LG+E I+ EW SD G + AG
Sbjct: 29 PAGAGWRSLTWADTEARVRAISAGLRALGVESEQVCAILASTRIEWVLSDFGILCAGAAT 88
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG- 312
+ +Y +++ E C + L S A + ED Q+ K+ +A+ P L+ +V ++G+ G
Sbjct: 89 STIYPSSTAEECAYILADSGAVVAFAEDALQVAKLASRRAEMPALRHVVVFDGEGSADGW 148
Query: 313 VISWDELMELGRAAPDESLDRVLETIAT---NECCTLVYTSGTEGASKPVMLSHDNITFN 369
V + +L GRA E ET A+ + TL+YTSGT G K V L+H
Sbjct: 149 VTTLADLEARGRAWDAEHPGAFEETAASVRPDALATLLYTSGTTGVPKGVELTHSCWVSQ 208
Query: 370 AACIIQYFKLESAALSVISFLPLSH 394
+A + L+ +LPL+H
Sbjct: 209 SASVQASGILDHEDPVQFFWLPLAH 233
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ KV++ G R R +SG+AP+S ++ +F ++ I I E +G++E + A + P
Sbjct: 334 LVFHKVRELFG-GRLRFFVSGSAPLSRDIAEFFDAMGIVILEGYGLTESSAATHANLPSK 392
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
K+ VG G + +I + +GEI ++
Sbjct: 393 RKIGTVGPAFRGIEVRIAE-----DGEILMR 418
>gi|31792735|ref|NP_855228.1| fatty-acid--CoA ligase [Mycobacterium bovis AF2122/97]
gi|121637471|ref|YP_977694.1| fatty-acid-CoA ligase FadD11 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989945|ref|YP_002644632.1| fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Tokyo 172]
gi|378771305|ref|YP_005171038.1| putative fatty acid CoA ligase [Mycobacterium bovis BCG str.
Mexico]
gi|449063624|ref|YP_007430707.1| fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Korea 1168P]
gi|31618325|emb|CAD96243.1| POSSIBLE FATTY-ACID-COA LIGASE FADD11 (FATTY-ACID-COA SYNTHETASE)
(FATTY-ACID-COA SYNTHASE) [Mycobacterium bovis
AF2122/97]
gi|121493118|emb|CAL71589.1| Possible fatty-acid-CoA ligase fadD11 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773058|dbj|BAH25864.1| putative fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Tokyo
172]
gi|341601489|emb|CCC64162.1| possible fatty-acid-CoA ligase fadD11 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356593626|gb|AET18855.1| putative fatty acid CoA ligase [Mycobacterium bovis BCG str.
Mexico]
gi|449032132|gb|AGE67559.1| fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 647
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 188 QTKIVDPDE------EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T ++DPD GN + ++Y A VR VA LG+ R +V ++ N E++
Sbjct: 55 RTAVMDPDAVALRTPGGNQTMTWRDYAAQVRRVAAGLAGLGVRRGDTVSLMMANRIEFYP 114
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA + G + +Y T E + + + + E + + +V+A ++ I
Sbjct: 115 LDVGAQHVGATSFSVYNTLPAEQLTYVFDNAGTKVVICEQ----QYVDRVRASGVPIEHI 170
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLD--RVLETIATNECCTLVYTSGTEGASKPV 359
V +G P PG +S L +L AA + D + + TL+YTSGT G K V
Sbjct: 171 VCVDGAP--PGTLS---LTDLYAAASGDFFDFESTWRAVQPEDIVTLIYTSGTTGNPKGV 225
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
++H N+ F I + + V SFLP +HIA + +Y
Sbjct: 226 EMTHANLLFEGYAIDEVLGIRFGD-RVTSFLPSAHIADRMTGLY 268
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+LSK+++ +G R +LSGAAPI E +F + IPI E++GMSE + T S P D
Sbjct: 363 VLSKLRERLGFGELRWALSGAAPIPKETLAFFAGIGIPIAEIWGMSELSCVATASHPRDG 422
Query: 176 KLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAF 218
+L VG+ +PG Q KI + E G + +K Y A+A
Sbjct: 423 RLGTVGKLLPGLQGKIAEDGEYLVRGPLVMKGYRKEPAKTAEAI 466
>gi|183221027|ref|YP_001839023.1| putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911121|ref|YP_001962676.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775797|gb|ABZ94098.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779449|gb|ABZ97747.1| Putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 644
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 6/233 (2%)
Query: 186 GTQTKIVDPDEEGNGE-ICLKE-YEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSD 243
G + V DE + + + KE Y+ + +A+A + LG+ +V ++ N EW SD
Sbjct: 17 GNRPAFVSKDESKSYKPVTFKEVYDLGI-NLAEALIDLGVSAKENVALLADNRLEWIVSD 75
Query: 244 LGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQ 303
G + +G T + ++ L +A + +E+DK LEK K ++Q K ++
Sbjct: 76 YGILMSGAADVPRGTDITDSEIVYILNHCEAKVVFLENDKMLEKFQKNRSQLEFAKTLIV 135
Query: 304 YEGKPDKPGVISWDELMELG---RAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVM 360
+ K GV+ +L+E G RA + + ++ I ++ T++YTSGT G K VM
Sbjct: 136 MDKKSTATGVLKLYDLIEKGKELRAKGSKKAEERMKAILPDDLFTIIYTSGTTGMPKGVM 195
Query: 361 LSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLW 413
L H N+ I+ A ++S LP+ H+ + + ++ AT +
Sbjct: 196 LKHSNMIHQTTAILGSMIDIKADERMLSILPVWHVFERVFEYLAIAAGCATYY 248
>gi|315503028|ref|YP_004081915.1| amp-dependent synthetase and ligase [Micromonospora sp. L5]
gi|315409647|gb|ADU07764.1| AMP-dependent synthetase and ligase [Micromonospora sp. L5]
Length = 620
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 210 NVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCL 269
V ++ ++GLE + I+ + E + DL A++ G + +Y T S E +
Sbjct: 54 EVAELSAGLAEIGLEAGRHMLIMMSSRTEHWLVDLAAVHLGAVPSTIYPTLSAEQMRYLA 113
Query: 270 VTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPG--VISWDELMELGRAA- 326
S A + V+E +LE+ + A P L +V + +P +P + + LGRAA
Sbjct: 114 RHSAAQVLVLEGPAELERWRPILADLPDLLRVVLVD-EPAEPAGDAVPLSRVRTLGRAAR 172
Query: 327 ---PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFKLESAA 383
PD + +R TI + TL+YTSGT G K V+LSH N+ + A + + A
Sbjct: 173 EADPD-AFERRWRTIRPEQPVTLLYTSGTTGNPKGVVLSHHNVIYQAVALDAMVSVPDHA 231
Query: 384 LSVISFLPLSHIAAQTVDIYS 404
+V ++LPL+HIA + + IY+
Sbjct: 232 PTV-AYLPLAHIAERFLGIYN 251
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 116 ILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDF 175
+L ++ +GL SGAAPI ++ R+ L + + EV+G++E G T++ PD F
Sbjct: 344 VLRPLQATLGLQNMTWPGSGAAPIPVDVLRFLAGLGVDVLEVWGLTETTGTATLNTPDRF 403
Query: 176 KLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ VGR G + ++ D +GEI ++
Sbjct: 404 RTGTVGRPNVGMEVRLAD-----DGEILVR 428
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 427 QAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
QAA+D AN + ++ ++++ F+ LP+ ++ +GEL PT+K++R +V +Y ID Y
Sbjct: 552 QAAVDAANAR-LARPEQVKTFQVLPSAWTPESGELTPTLKLRRRVIVDRYGDRIDALY 608
>gi|289753636|ref|ZP_06513014.1| fatty-acid-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289694223|gb|EFD61652.1| fatty-acid-CoA ligase [Mycobacterium tuberculosis EAS054]
Length = 647
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 188 QTKIVDPDE------EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T ++DPD GN + ++Y A VR VA LG+ R +V ++ N E++
Sbjct: 55 RTAVMDPDAVALRTPGGNQTMTWRDYAAQVRRVAAGLAGLGVRRGDTVSLMMANRIEFYP 114
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA + G + +Y T E + + + + E + + +V+A ++ I
Sbjct: 115 LDVGAQHVGATSFSVYNTLPAEQLTYVFDNAGTKVVICEQ----QYVDRVRASGVPIEHI 170
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLD--RVLETIATNECCTLVYTSGTEGASKPV 359
V +G P PG +S L +L AA + D + + TL+YTSGT G K V
Sbjct: 171 VCVDGAP--PGTLS---LTDLYAAASGDFFDFESTWRAVQPEDIVTLIYTSGTTGNPKGV 225
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
++H N+ F I + + V SFLP +HIA + +Y
Sbjct: 226 EMTHANLLFEGYAIDEVLGIRFGD-RVTSFLPSAHIADRMTGLY 268
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSK+++ +G R +LSGAAPI E +F + IPI E++GMSE + T S P D
Sbjct: 362 LVLSKLRERLGFGELRWALSGAAPIPKETLAFFAGIGIPIAEIWGMSELSCVATASHPRD 421
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAF 218
+L VG+ +PG Q KI + E G + +K Y A+A
Sbjct: 422 GRLGTVGKLLPGLQGKIAEDGEYLVRGPLVMKGYRKEPAKTAEAI 466
>gi|289447160|ref|ZP_06436904.1| fatty-acid-CoA ligase fadD11 [Mycobacterium tuberculosis CPHL_A]
gi|339631620|ref|YP_004723262.1| hypothetical protein MAF_15760 [Mycobacterium africanum GM041182]
gi|289420118|gb|EFD17319.1| fatty-acid-CoA ligase fadD11 [Mycobacterium tuberculosis CPHL_A]
gi|339330976|emb|CCC26648.1| unnamed protein product [Mycobacterium africanum GM041182]
Length = 647
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 188 QTKIVDPDE------EGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFY 241
+T ++DPD GN + ++Y A VR VA LG+ R +V ++ N E++
Sbjct: 55 RTAVMDPDAVALRTPGGNQTMTWRDYAAQVRRVAAGLAGLGVRRGDTVSLMMANRIEFYP 114
Query: 242 SDLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAI 301
D+GA + G + +Y T E + + + + E + + +V+A ++ I
Sbjct: 115 LDVGAQHVGATSFSVYNTLPAEQLTYVFDNAGTKVVICEQ----QYVDRVRASGVPIEHI 170
Query: 302 VQYEGKPDKPGVISWDELMELGRAAPDESLD--RVLETIATNECCTLVYTSGTEGASKPV 359
V +G P PG +S L +L AA + D + + TL+YTSGT G K V
Sbjct: 171 VCVDGAP--PGTLS---LTDLYAAASGDFFDFESTWRAVQPEDIVTLIYTSGTTGNPKGV 225
Query: 360 MLSHDNITFNAACIIQYFKLESAALSVISFLPLSHIAAQTVDIY 403
++H N+ F I + + V SFLP +HIA + +Y
Sbjct: 226 EMTHANLLFEGYAIDEVLGIRFGD-RVTSFLPSAHIADRMTGLY 268
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+LSK+++ +G R +LSGAAPI E +F + IPI E++GMSE + T S P D
Sbjct: 362 LVLSKLRERLGFGELRWALSGAAPIPKETLAFFAGIGIPIAEIWGMSELSCVATASHPRD 421
Query: 175 FKLDGVGRTIPGTQTKIVDPDEE-GNGEICLKEYEANVRTVAKAF 218
+L VG+ +PG Q KI + E G + +K Y A+A
Sbjct: 422 GRLGTVGKLLPGLQGKIAEDGEYLVRGPLVMKGYRKEPAKTAEAI 466
>gi|392414270|ref|YP_006450875.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium chubuense
NBB4]
gi|390614046|gb|AFM15196.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium chubuense
NBB4]
Length = 614
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 4/204 (1%)
Query: 194 PDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFA 253
P G + ++ V+ A L LG++ V I EW Y+DL + AG
Sbjct: 40 PTNGGWASVSWRQTAETVKATAAGLLALGIQPEERVAIASATRIEWLYADLAIMCAGAAT 99
Query: 254 AGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGV 313
+Y + E L S + I EDD Q+ K+ + P + +V ++G+ D V
Sbjct: 100 TAVYPSTGGEDVAFILSDSGSRIVFAEDDTQIAKLRAQRDHIPDVFRVVTFDGEADGEWV 159
Query: 314 ISWDELMELGRAAPDE---SLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNA 370
+S +L LG E ++D + + + TL+YTSGT G K V L H T+
Sbjct: 160 VSLQDLQALGAKHLIEHPTAVDEAVAAVQPAQLATLIYTSGTTGRPKGVELPHRCWTYIG 219
Query: 371 ACIIQYFKLESAALSVISFLPLSH 394
A ++ L S + +LP+SH
Sbjct: 220 AG-VEAIDLVSPSDLHYLWLPMSH 242
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L L+LSK++ +G R R +SG+A +S ++ +F + +P+ E + ++E + A
Sbjct: 337 YALADRLVLSKIRARLG-GRIRFLVSGSAALSRDVAAWFAAAGMPVLEGYALTETSAAGC 395
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 205
+ P+D + VG + GT KI D +GEI ++
Sbjct: 396 IGRPEDPTIGLVGPPLVGTVIKIAD-----DGEIFVR 427
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 422 VYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIID 481
V++ Q ++ N + ++ + I+ F L D S+ GEL P+MKVKR V K++S++D
Sbjct: 547 VHRYVQTCVEELNGR-LNRWETIKDFRILDHDLSVEEGELTPSMKVKRKVVETKFESLLD 605
Query: 482 KFYD 485
YD
Sbjct: 606 SMYD 609
>gi|301062191|ref|ZP_07202873.1| AMP-binding enzyme [delta proteobacterium NaphS2]
gi|300443703|gb|EFK07786.1| AMP-binding enzyme [delta proteobacterium NaphS2]
Length = 640
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 16/224 (7%)
Query: 205 KEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEA 264
++Y NV+ ++ + LGL+ V +IG N PE ++++ A+ AGG A ++ +
Sbjct: 46 QDYYDNVKYLSLGMVSLGLKPGDKVAMIGDNRPEGLWAEMAALCAGGVAVWLFQDCMMDE 105
Query: 265 CLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP----DKPGVISWDELM 320
+ + SD + V E ++++K L +K +CPKL+ I+ + K + ++S ++
Sbjct: 106 VKYIIDHSDTKMFVGETQEEVDKALSIKEECPKLEKILWDDPKGMRNYHQDFLMSLKKVQ 165
Query: 321 ELGRAA----PDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNIT---FNAACI 373
ELGR PD +++++ ++ C L YTSGT K V+LSH N+ N +
Sbjct: 166 ELGRELDRKDPD-LFEKLVQQGTGDDVCLLFYTSGTTSLPKGVLLSHWNMLTMGHNLMAV 224
Query: 374 IQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFADK 417
+ + +S+LP + I Q + I + V TL F ++
Sbjct: 225 DPCYDTD----DFVSYLPFAWIGEQMMSISCGLQVGYTLNFPEE 264
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 74 LQTTGVKRWIANYAKSTSLQHYMAYLEKNVSEPYTYRLVRWL----ILSKVKQAMGLDRC 129
+ T +KR I + + EK P + +L+ W+ + K+K +GL R
Sbjct: 299 IDATWIKRKIYEFGTKMGYKAANLKFEKK-PVPLSLKLLNWIAYGIMQKKLKDHLGLSRL 357
Query: 130 RVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQT 189
R +G A + + R+F +L + + +++G +E AG V + K D VG IP T+
Sbjct: 358 RHCYTGGAAMGPDHFRFFHALGVNLKQIYGQTEIAGISIVHRDGNVKFDTVGTPIPETEV 417
Query: 190 KIVDPDEEG 198
KI +EEG
Sbjct: 418 KI---NEEG 423
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+VY Q I+ AN K + KI KF L F EL T K++R FV ++Y+ I+
Sbjct: 545 EVYDLIQKQIEEAN-KDLPVPAKIHKFINLYKVFDADDEELTRTSKLRRAFVTERYKDIV 603
Query: 481 DKFY 484
D Y
Sbjct: 604 DALY 607
>gi|258625340|ref|ZP_05720239.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
gi|258582381|gb|EEW07231.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
Length = 601
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++ + ++ A L G+ + I N P W +D A+ +Y TN+
Sbjct: 36 ISWHQFGEQLDALSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPGVISWDE 318
PE + L +DA + V + Q + L CP+L+ IV D + WD+
Sbjct: 96 PEQAAYILQNADAKVVFVGEQPQFDAALSQFEHCPELRLIVAMNPNIDLKQASCAMHWDD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ + L ++E ++ TL+YTSGT G K VML + NI Q
Sbjct: 156 FVAQNQTQDHTPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLN 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LTQDDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLHD 252
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
++L L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 NHQLADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
T+S DD F D +G ++PG Q KI + +E G + ++ Y + A +F + G
Sbjct: 381 TISCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLEKETADSFDEHGF 439
>gi|42524534|ref|NP_969914.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
gi|39576743|emb|CAE80907.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
Length = 593
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 9/221 (4%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
E EY +++ V A L LG++ V I+ EW +DLG +Y N
Sbjct: 34 EKSWNEYYSDIEAVGCALLSLGIKPGDRVAIMANTRVEWSTTDLGIFGIKAITVPIYQNN 93
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
+ + + L S++ I + E L+ V+++CPK++ ++ ++ P V++W +L+
Sbjct: 94 TADDVEYILNNSESRILICESRGPLKTFESVRSKCPKVEKVIVFDETCPNPDVVTWPKLL 153
Query: 321 ELGR---AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF 377
++G+ A + ++ + T++YTSGT G K V+++H + + F
Sbjct: 154 QMGKDYLAKHPSQFQELCASLTQEDIATILYTSGTTGRPKGVVMTHLQAISEVS---EAF 210
Query: 378 KLESA--ALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L A A + +SFLP +HI + ++ + + TL FA+
Sbjct: 211 PLCGATEADTSLSFLPYAHILGR-IEHWGHAYIGFTLAFAE 250
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 30/150 (20%)
Query: 109 YRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHT 168
Y L + L+L K+ A G R R ++SG API E+ +F + I I E +G++E A T
Sbjct: 323 YELAKKLVLDKIPTAFG-GRLRFAISGGAPIPREIALFFHAAGILILEGYGLTETTAAVT 381
Query: 169 VSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEI------CLKEYEANVRTVAKAFLKLG 222
V+ P ++K VGR I + KI + +GEI +KEY N +AF
Sbjct: 382 VNTPFNYKFGSVGRPIGEVKLKIAE-----DGEILVKSDKVMKEYYKNPEATKEAF---- 432
Query: 223 LERYHSVCIIGFNAPEWFYS-DLGAIYAGG 251
WF++ D+G I GG
Sbjct: 433 -------------TDGWFHTGDIGEILPGG 449
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 414 FADKNALKVYKATQAAIDRANLKS---ISNAQKIQKFEFLPADFSIPTGELGPTMKVKRP 470
++D N+L Q I +A ++ +++ + I+K+ LP +F++ GEL P++KVKR
Sbjct: 519 YSDWNSLVQSPFVQDLIRKAVAETNSQLASFESIKKYVILPNEFTVEGGELTPSLKVKRK 578
Query: 471 FVVKKYQSIIDKFY 484
+ ++++ I++ Y
Sbjct: 579 VLDQRFKDKIEELY 592
>gi|419963741|ref|ZP_14479707.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
gi|414570818|gb|EKT81545.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
Length = 616
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Query: 192 VDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGG 251
VDP + + + E VR +A + LG++ V + EW +DL + AG
Sbjct: 46 VDPKKWSS--VTWSEAGDRVRNLAAGLIVLGVQAEQRVALASATRYEWVLADLAVMCAGA 103
Query: 252 FAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKP-DK 310
+Y T + + + S + I ED QL K+ + +++ ++ +V +G P D
Sbjct: 104 ATTTVYPTTTAGDVAYIVANSGSCIVFAEDHAQLAKLREERSELGAVEKVVLIDGDPGDD 163
Query: 311 PGVISWDELMELGR----AAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNI 366
VI++D+L +LG PD DR+ E I ++ TL+YTSGT G K V LSH
Sbjct: 164 DWVITFDQLHDLGEELLAETPDAVHDRI-EAIGPDDLATLIYTSGTTGRPKGVRLSHSAW 222
Query: 367 TFNAACIIQYFKLESAALSVISFLPLSHI 395
T+ AA I L++ L + +LPLSH+
Sbjct: 223 TYVAAAIDATGILDADDLQYL-WLPLSHV 250
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ S +++ G R + +SG+A ++ ++ ++F ++ I + E +G+SE + A V+ P
Sbjct: 350 LVYSTIRERFG-GRLKFFISGSAALNRDVAQWFDAVGIVVLEGYGLSETSAASFVNRPSA 408
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK------EYEANVRTVAKAFLKLGLER 225
++ VG IPGT+T+I D +GEI +K Y N A+A G R
Sbjct: 409 YRFGTVGWAIPGTETRIGD-----DGEILIKGPGVMSGYHENPEATAEALTDDGWFR 460
>gi|284991751|ref|YP_003410305.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284064996|gb|ADB75934.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 616
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 8/206 (3%)
Query: 201 EICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTN 260
++ +++ VR VAK + G+ V + EW D AGG +Y T+
Sbjct: 45 DVSWRQFGEEVRGVAKGLIAAGVAAGDRVALQAKTRYEWTVLDYAIWTAGGVVVPIYETS 104
Query: 261 SPEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPDKPGVISWDELM 320
S + L S A VVE D+ + V+ Q P L A+ E D G L
Sbjct: 105 SADQVAWILSDSGATAVVVERDEHAAAVESVRDQAPDLSAVFVIE--DDAVGT-----LT 157
Query: 321 ELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF-KL 379
G+ PD LD T+ + TL+YTSGT G K L+H N F I +
Sbjct: 158 VAGQDVPDSELDARRATLDADSPATLIYTSGTTGRPKGCELTHRNFLFEIGNGITLLDRF 217
Query: 380 ESAALSVISFLPLSHIAAQTVDIYSV 405
+A S++ F+PL+H+ A+ + + +V
Sbjct: 218 INAQSSLLLFIPLAHVLARVLQVGAV 243
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 115 LILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDD 174
L+ K++ A+G RC+ ++SG AP+ L +F + +P+ E +G++E A +V+
Sbjct: 330 LVYGKLRAALG-GRCQGAISGGAPLGERLGHFFRGIGVPVFEGYGLTETTAAASVNHDGA 388
Query: 175 FKLDGVGRTIPGTQTKIVDPDEEGNGEICLKEYEANVRTVAKAFLKLGLERYHSVCIIGF 234
++ VGR +PG I + +GEI ++ + G R +
Sbjct: 389 LRIGTVGRPLPGVGFAIAE-----DGEILIR----------GGIVMRGYWRNEAATTEAI 433
Query: 235 NAPEWFYS-DLGAIYAGGFAAGMYTTNSPEACLHCLVTSDANICVVEDDKQLEKILK--- 290
+A WF+S DLG I A GF + T + L + V+ED + +++
Sbjct: 434 DADGWFHSGDLGEIDADGF---VKITGRKKEILVTAGGKNVAPAVLEDRLRAHRLVSQCI 490
Query: 291 -VKAQCPKLKAIVQYE 305
V Q P + A+V +
Sbjct: 491 VVGDQRPYIAALVTLD 506
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 428 AAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
AA+ AN K++S A+ I++F L DF+ G L P++K+KR V+K++ + ++ Y
Sbjct: 540 AAVADAN-KAVSQAEAIKRFRVLGTDFTEDNGMLTPSLKLKRSVVLKEFDAEVEGLY 595
>gi|262170570|ref|ZP_06038248.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
gi|261891646|gb|EEY37632.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
Length = 601
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 4/218 (1%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
I ++ + ++ A L G+ + I N P W +D A+ +Y TN+
Sbjct: 36 ISWHQFGEQLDALSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNT 95
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPKLKAIVQYEGKPD---KPGVISWDE 318
PE + L +DA + V + Q + L CP+L+ IV D + WD+
Sbjct: 96 PEQAAYILQNADAKVVFVGEQPQFDAALSQFEHCPELRLIVAMNPNIDLKQASCAMHWDD 155
Query: 319 LMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYFK 378
+ + L ++E ++ TL+YTSGT G K VML + NI Q
Sbjct: 156 FVAQNQTQDHTPLLELIEQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLN 215
Query: 379 LESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
L +S + FLPLSH+ + Y + A + D
Sbjct: 216 LTQDDVS-LCFLPLSHVFERAWTAYVLYKGATNCYLHD 252
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 436 KSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSIIDKFY 484
K ++ ++++KF+ LP FS+ +GEL PT K++R + +YQ I++ Y
Sbjct: 547 KELAKFEQVKKFKLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 108 TYRLVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAH 167
++L L+LSK++ +G R G A + + R+F ++ I + +GM+E
Sbjct: 324 NHQLADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTA-- 380
Query: 168 TVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-EGNGEICLKEYEANVRTVAKAFLKLGL 223
T+S DD F D +G ++PG Q KI + +E G + ++ Y + A++F + G
Sbjct: 381 TISCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVMRGYYKLEKETAESFDEHGF 439
>gi|431931379|ref|YP_007244425.1| AMP-forming long-chain acyl-CoA synthetase [Thioflavicoccus mobilis
8321]
gi|431829682|gb|AGA90795.1| AMP-forming long-chain acyl-CoA synthetase [Thioflavicoccus mobilis
8321]
Length = 606
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 202 ICLKEYEANVRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNS 261
+ +E V +A GL R V ++ N PEW + DL A+ G +YT +
Sbjct: 47 LTWRETAVQVGRWREALAAEGLRRGDRVALLLRNCPEWVFFDLAALSLGLVTVPLYTDDR 106
Query: 262 PEACLHCLVTSDANICVVEDDKQLEKILKVKAQCPK-LKAIVQYEGKP------DKPGVI 314
PE ++ + S + +V+D + +I V + P ++ I+ G D P V+
Sbjct: 107 PENAVYIIEDSAVKVMLVQDAGRWRRIAGVLGERPNPVRVILLDPGGDARRVARDDPRVV 166
Query: 315 SWDELMELGRAAPDESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAAC-- 372
+ + +G A V +E T+VYTSGT G K VMLSH NI F+A
Sbjct: 167 LAQDWLPIGGAKI------VQRDGDPDELATIVYTSGTTGRPKGVMLSHRNILFDAHASL 220
Query: 373 -IIQYFKLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFA 415
II ++ + + +SFLPLSH+ +T Y M + + ++
Sbjct: 221 TIIDCYQED----AFLSFLPLSHMLERTGGYYLPMMAGSVVAYS 260
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 128 RCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGT 187
R RV++SG A + TE+ F+ L +PI + +G++E + +V++ D + + VG + G
Sbjct: 352 RLRVAVSGGAAMPTEVAHLFIGLGLPIVQGYGLTETSPVVSVNSLQDNRPESVGIPLRGI 411
Query: 188 QTKIVDPDE 196
Q +I D DE
Sbjct: 412 QVRIGDDDE 420
>gi|448336418|ref|ZP_21525517.1| AMP-dependent synthetase and ligase [Natrinema pallidum DSM 3751]
gi|445629158|gb|ELY82452.1| AMP-dependent synthetase and ligase [Natrinema pallidum DSM 3751]
Length = 674
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 211 VRTVAKAFLKLGLERYHSVCIIGFNAPEWFYSDLGAIYAGGFAAGMYTTNSPEACLHCLV 270
VR ++ F LG+E + + EW +D + AG +YT++SPE + L
Sbjct: 73 VRRLSAGFRDLGVETGDRIGLFANTRMEWAQTDFALLGAGAVVTTVYTSSSPEQVEYLLD 132
Query: 271 TSDANICVVEDDKQLEKILKVKAQCPKLKAIVQY---EGKPDKPGVISWDELMELGRAAP 327
DA+ VVE++ LE +L V+ L+ IV EG D+ +++ E+ G A
Sbjct: 133 DPDADGVVVENEALLETVLSVE-DALDLEFIVSMDAIEGYDDRDDILTLGEVYARGDATF 191
Query: 328 D-ESLDRVLETIATNECCTLVYTSGTEGASKPVMLSHDNITFNAACIIQYF--------- 377
D E+ + +E ++ +L+YTSGT G K V L+H N N + F
Sbjct: 192 DLEAYEARIEETELDDLASLIYTSGTTGQPKGVQLTHGNFRSNVNASRKRFGPRPDKGDD 251
Query: 378 ----KLESAALSVISFLPLSHIAAQTVDIYSVMTVAATLWFAD 416
ES AL S+LPL+H+ +T + + A + +A+
Sbjct: 252 VPVLNEESVAL---SYLPLAHVFERTAGHFVLFASGACVAYAE 291
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 421 KVYKATQAAIDRANLKSISNAQKIQKFEFLPADFSIPTGELGPTMKVKRPFVVKKYQSII 480
+V Q +DR N ++ + I++FE +P +F+ L PTMK KR ++++++ +
Sbjct: 609 RVRDHIQQEVDRVN-ENFEKHETIKQFELVPLEFTEENDMLTPTMKKKRRVILERFEDRV 667
Query: 481 DKFYD 485
D+ ++
Sbjct: 668 DRIFE 672
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 111 LVRWLILSKVKQAMGLDRCRVSLSGAAPISTELKRYFLSLDIPICEVFGMSECAGAHTVS 170
L L+ S V++A+G + +SG +S EL R + ++ +PI E +G++E A +
Sbjct: 362 LADTLVFSTVREALG-GNIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETAPIVATN 420
Query: 171 APDDFKLDGVG 181
P+ K+ +G
Sbjct: 421 PPEAAKIGTIG 431
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,648,311,155
Number of Sequences: 23463169
Number of extensions: 316404437
Number of successful extensions: 805576
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4589
Number of HSP's successfully gapped in prelim test: 9512
Number of HSP's that attempted gapping in prelim test: 775719
Number of HSP's gapped (non-prelim): 29059
length of query: 486
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 339
effective length of database: 8,910,109,524
effective search space: 3020527128636
effective search space used: 3020527128636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)