Query psy2847
Match_columns 83
No_of_seqs 108 out of 1955
Neff 9.8
Searched_HMMs 46136
Date Fri Aug 16 18:24:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2847.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2847hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1022 FAA1 Long-chain acyl-C 99.7 3.3E-17 7.2E-22 109.9 7.7 77 1-83 351-429 (613)
2 KOG1256|consensus 99.7 4E-16 8.6E-21 105.1 8.1 82 1-83 417-507 (691)
3 KOG1176|consensus 99.6 1.5E-15 3.3E-20 101.0 8.7 82 2-83 297-388 (537)
4 PLN02387 long-chain-fatty-acid 99.6 1.2E-15 2.7E-20 103.7 7.9 80 4-83 420-511 (696)
5 PTZ00342 acyl-CoA synthetase; 99.6 2.5E-15 5.4E-20 103.1 8.8 80 4-83 461-550 (746)
6 PF00501 AMP-binding: AMP-bind 99.6 1.3E-15 2.8E-20 97.4 6.7 82 2-83 275-368 (417)
7 COG0365 Acs Acyl-coenzyme A sy 99.6 2.2E-15 4.8E-20 100.0 7.6 79 2-82 288-374 (528)
8 PRK06334 long chain fatty acid 99.6 6E-15 1.3E-19 97.7 8.8 82 2-83 297-389 (539)
9 PRK05677 long-chain-fatty-acid 99.6 7.9E-15 1.7E-19 97.3 8.5 81 3-83 325-413 (562)
10 PTZ00237 acetyl-CoA synthetase 99.6 5.5E-15 1.2E-19 99.8 7.6 81 2-82 378-467 (647)
11 PLN02736 long-chain acyl-CoA s 99.6 6.9E-15 1.5E-19 99.2 7.7 80 4-83 376-467 (651)
12 COG0318 CaiC Acyl-CoA syntheta 99.6 8.8E-15 1.9E-19 97.1 8.0 79 5-83 292-381 (534)
13 PRK08043 bifunctional acyl-[ac 99.6 1.2E-14 2.6E-19 99.0 8.8 82 2-83 477-562 (718)
14 PRK07788 acyl-CoA synthetase; 99.6 1E-14 2.2E-19 96.4 7.5 81 3-83 322-411 (549)
15 PTZ00216 acyl-CoA synthetase; 99.6 7.4E-15 1.6E-19 99.9 6.8 79 4-83 428-516 (700)
16 PRK12492 long-chain-fatty-acid 99.6 2.7E-14 5.8E-19 94.8 8.7 82 2-83 331-421 (562)
17 PRK13382 acyl-CoA synthetase; 99.6 2E-14 4.4E-19 95.0 8.1 81 3-83 311-400 (537)
18 PRK07529 AMP-binding domain pr 99.6 2.1E-14 4.6E-19 96.7 8.3 82 2-83 331-426 (632)
19 PLN02614 long-chain acyl-CoA s 99.5 2.3E-14 5E-19 97.2 7.8 80 4-83 386-477 (666)
20 PRK06060 acyl-CoA synthetase; 99.5 3.5E-14 7.5E-19 96.5 8.5 81 3-83 259-348 (705)
21 PRK13295 cyclohexanecarboxylat 99.5 6.5E-14 1.4E-18 92.6 8.9 81 3-83 311-401 (547)
22 PRK08633 2-acyl-glycerophospho 99.5 4.9E-14 1.1E-18 99.1 8.8 82 2-83 896-996 (1146)
23 KOG1180|consensus 99.5 2.2E-14 4.8E-19 94.9 6.2 80 4-83 402-492 (678)
24 PRK12582 acyl-CoA synthetase; 99.5 4.4E-14 9.5E-19 95.0 7.6 79 3-83 345-432 (624)
25 PRK04319 acetyl-CoA synthetase 99.5 8E-14 1.7E-18 92.7 8.7 80 2-81 321-409 (570)
26 PRK08180 feruloyl-CoA synthase 99.5 8.7E-14 1.9E-18 93.4 8.5 79 3-83 333-420 (614)
27 PRK13383 acyl-CoA synthetase; 99.5 8.5E-14 1.9E-18 91.5 8.2 81 3-83 291-380 (516)
28 PRK08314 long-chain-fatty-acid 99.5 6.7E-14 1.5E-18 92.3 7.7 81 3-83 304-393 (546)
29 TIGR02316 propion_prpE propion 99.5 1E-13 2.3E-18 93.2 8.7 81 2-82 352-445 (628)
30 PRK06839 acyl-CoA synthetase; 99.5 1.5E-13 3.2E-18 89.6 8.7 82 2-83 262-352 (496)
31 PLN02860 o-succinylbenzoate-Co 99.5 1.2E-13 2.6E-18 91.8 8.3 81 3-83 287-394 (563)
32 PLN03051 acyl-activating enzym 99.5 1.3E-13 2.8E-18 90.6 8.2 81 2-82 234-327 (499)
33 TIGR03208 cyc_hxne_CoA_lg cycl 99.5 1.7E-13 3.7E-18 90.5 8.6 82 2-83 308-399 (538)
34 PLN02574 4-coumarate--CoA liga 99.5 1.8E-13 3.9E-18 90.9 8.6 81 3-83 318-410 (560)
35 PRK07656 long-chain-fatty-acid 99.5 2.1E-13 4.6E-18 89.0 8.7 81 2-82 279-371 (513)
36 PLN02861 long-chain-fatty-acid 99.5 1.1E-13 2.4E-18 93.8 7.5 80 4-83 383-474 (660)
37 PRK10524 prpE propionyl-CoA sy 99.5 1.5E-13 3.3E-18 92.2 8.0 81 2-82 353-446 (629)
38 PRK09274 peptide synthase; Pro 99.5 1.4E-13 3.1E-18 91.0 7.6 82 2-83 286-396 (552)
39 TIGR02188 Ac_CoA_lig_AcsA acet 99.5 2.8E-13 6E-18 91.0 8.8 81 2-82 356-450 (625)
40 PRK00174 acetyl-CoA synthetase 99.5 2.8E-13 6.1E-18 91.2 8.9 81 2-82 365-458 (637)
41 PRK05851 long-chain-fatty-acid 99.5 1.1E-13 2.4E-18 91.3 6.8 82 2-83 270-381 (525)
42 PRK09088 acyl-CoA synthetase; 99.5 2.6E-13 5.6E-18 88.5 8.4 81 3-83 251-341 (488)
43 PRK12406 long-chain-fatty-acid 99.5 3.4E-13 7.5E-18 88.4 8.9 81 2-82 269-358 (509)
44 PLN02654 acetate-CoA ligase 99.5 2.6E-13 5.6E-18 92.1 8.5 81 2-82 395-488 (666)
45 PRK06814 acylglycerophosphoeth 99.5 2.9E-13 6.2E-18 95.7 8.9 82 2-83 905-990 (1140)
46 PRK08974 long-chain-fatty-acid 99.5 4.3E-13 9.3E-18 88.9 8.8 81 3-83 324-413 (560)
47 PRK07787 acyl-CoA synthetase; 99.5 6.1E-13 1.3E-17 86.7 8.9 81 3-83 240-330 (471)
48 PRK07059 Long-chain-fatty-acid 99.5 3.3E-13 7.2E-18 89.4 7.8 82 2-83 325-415 (557)
49 TIGR01733 AA-adenyl-dom amino 99.5 4.5E-13 9.6E-18 85.3 8.1 81 2-82 232-326 (408)
50 PRK07514 malonyl-CoA synthase; 99.5 3.6E-13 7.8E-18 88.0 7.8 81 3-83 268-357 (504)
51 PRK06087 short chain acyl-CoA 99.5 5.7E-13 1.2E-17 88.1 8.5 82 2-83 300-390 (547)
52 TIGR02262 benz_CoA_lig benzoat 99.5 4.3E-13 9.3E-18 87.9 7.9 79 4-82 278-364 (508)
53 PLN02430 long-chain-fatty-acid 99.5 3.9E-13 8.4E-18 91.2 7.8 80 4-83 383-474 (660)
54 PRK08751 putative long-chain f 99.4 5E-13 1.1E-17 88.5 8.0 81 2-82 327-416 (560)
55 PRK05605 long-chain-fatty-acid 99.4 4.3E-13 9.4E-18 89.1 7.6 81 2-82 334-425 (573)
56 PRK06187 long-chain-fatty-acid 99.4 4.4E-13 9.5E-18 87.5 7.2 82 2-83 279-376 (521)
57 PRK07445 O-succinylbenzoic aci 99.4 5E-13 1.1E-17 87.2 7.3 78 3-83 229-310 (452)
58 PRK06145 acyl-CoA synthetase; 99.4 1.2E-12 2.6E-17 85.5 8.5 82 2-83 262-354 (497)
59 PRK07769 long-chain-fatty-acid 99.4 5.3E-13 1.2E-17 89.8 6.9 82 2-83 304-427 (631)
60 PRK08315 AMP-binding domain pr 99.4 8E-13 1.7E-17 87.4 7.5 81 2-82 313-406 (559)
61 PRK03640 O-succinylbenzoic aci 99.4 1E-12 2.2E-17 85.5 7.9 80 4-83 254-341 (483)
62 PRK03584 acetoacetyl-CoA synth 99.4 1E-12 2.2E-17 88.8 8.2 81 2-82 381-471 (655)
63 PRK12583 acyl-CoA synthetase; 99.4 1.2E-12 2.5E-17 86.5 8.2 81 2-82 315-407 (558)
64 TIGR03098 ligase_PEP_1 acyl-Co 99.4 1.3E-12 2.7E-17 85.5 8.3 81 2-82 272-362 (515)
65 PRK07470 acyl-CoA synthetase; 99.4 7.8E-13 1.7E-17 87.0 7.4 82 2-83 278-375 (528)
66 PRK07638 acyl-CoA synthetase; 99.4 2.1E-12 4.5E-17 84.4 8.9 80 4-83 253-342 (487)
67 PRK08276 long-chain-fatty-acid 99.4 1.3E-12 2.8E-17 85.5 7.6 80 2-82 260-348 (502)
68 PRK08316 acyl-CoA synthetase; 99.4 1.9E-12 4.2E-17 84.7 8.4 81 2-82 284-375 (523)
69 PRK12316 peptide synthase; Pro 99.4 1.1E-12 2.4E-17 102.0 8.2 81 3-83 3310-3398(5163)
70 PRK12467 peptide synthase; Pro 99.4 1.4E-12 3E-17 100.2 8.5 82 2-83 3349-3444(3956)
71 PRK06188 acyl-CoA synthetase; 99.4 1.6E-12 3.5E-17 85.5 7.9 81 2-82 279-373 (524)
72 PRK10252 entF enterobactin syn 99.4 1.4E-12 3.1E-17 92.9 8.0 80 3-82 716-810 (1296)
73 PRK05857 acyl-CoA synthetase; 99.4 2.4E-12 5.2E-17 85.3 8.4 82 2-83 284-383 (540)
74 PRK13390 acyl-CoA synthetase; 99.4 1.5E-12 3.4E-17 85.2 7.4 80 3-83 269-357 (501)
75 PLN02330 4-coumarate--CoA liga 99.4 2.7E-12 5.8E-17 85.0 8.2 78 5-82 304-396 (546)
76 PRK12316 peptide synthase; Pro 99.4 1.7E-12 3.6E-17 101.1 8.0 81 3-83 769-860 (5163)
77 PRK07008 long-chain-fatty-acid 99.4 2.8E-12 6E-17 84.9 8.1 82 2-83 291-393 (539)
78 PRK12476 putative fatty-acid-- 99.4 1.3E-12 2.9E-17 87.6 6.3 81 2-83 316-438 (612)
79 TIGR01217 ac_ac_CoA_syn acetoa 99.4 2.6E-12 5.7E-17 87.0 7.6 81 2-82 382-472 (652)
80 PLN02246 4-coumarate--CoA liga 99.4 4.8E-12 1E-16 83.6 8.7 81 3-83 297-392 (537)
81 PRK13391 acyl-CoA synthetase; 99.4 4.8E-12 1E-16 83.1 8.6 80 2-82 273-361 (511)
82 PRK10946 entE enterobactin syn 99.4 5.3E-12 1.1E-16 83.5 8.6 81 3-83 299-389 (536)
83 TIGR03205 pimA dicarboxylate-- 99.4 3.3E-12 7.2E-17 84.4 7.6 81 3-83 311-402 (541)
84 PRK06710 long-chain-fatty-acid 99.4 2.3E-12 4.9E-17 85.5 6.7 80 3-82 322-411 (563)
85 TIGR02275 DHB_AMP_lig 2,3-dihy 99.4 5.9E-12 1.3E-16 83.0 8.5 82 2-83 297-388 (527)
86 PRK05691 peptide synthase; Val 99.3 3.7E-12 8.1E-17 98.3 7.9 81 3-83 1387-1478(4334)
87 PRK07786 long-chain-fatty-acid 99.3 8E-12 1.7E-16 82.7 8.4 78 5-82 291-379 (542)
88 TIGR01734 D-ala-DACP-lig D-ala 99.3 7.6E-12 1.6E-16 81.8 8.1 81 3-83 257-351 (502)
89 TIGR03443 alpha_am_amid L-amin 99.3 6.3E-12 1.4E-16 90.4 8.0 81 3-83 528-630 (1389)
90 PRK06018 putative acyl-CoA syn 99.3 1.2E-11 2.6E-16 81.9 8.1 82 2-83 292-393 (542)
91 PRK12467 peptide synthase; Pro 99.3 9.5E-12 2.1E-16 95.8 8.3 81 3-83 1833-1927(3956)
92 TIGR01923 menE O-succinylbenzo 99.3 1.6E-11 3.6E-16 78.9 7.9 79 4-82 219-300 (436)
93 PRK04813 D-alanine--poly(phosp 99.3 2.1E-11 4.4E-16 79.6 8.3 81 2-82 258-352 (503)
94 PRK05852 acyl-CoA synthetase; 99.3 1.5E-11 3.2E-16 81.3 7.7 81 3-83 294-389 (534)
95 PLN03052 acetate--CoA ligase; 99.3 1.9E-11 4.1E-16 84.0 8.1 81 2-82 469-561 (728)
96 PRK05691 peptide synthase; Val 99.3 1.6E-11 3.5E-16 95.0 8.4 81 3-83 3982-4075(4334)
97 KOG1177|consensus 99.3 3.8E-12 8.3E-17 83.4 4.0 82 2-83 348-441 (596)
98 PRK07768 long-chain-fatty-acid 99.3 3.3E-11 7.2E-16 79.7 7.7 81 2-82 274-394 (545)
99 PRK09192 acyl-CoA synthetase; 99.2 3E-11 6.5E-16 80.7 6.0 82 2-83 297-420 (579)
100 PRK05620 long-chain-fatty-acid 99.2 1.4E-10 3.1E-15 77.4 8.4 79 4-82 298-393 (576)
101 PRK09029 O-succinylbenzoic aci 99.2 2.1E-10 4.6E-15 74.6 7.7 71 4-82 240-312 (458)
102 PRK06155 crotonobetaine/carnit 99.1 3.2E-10 7E-15 75.3 8.2 77 3-82 293-377 (542)
103 COG1021 EntE Peptide arylation 99.1 6.2E-11 1.3E-15 76.7 4.3 81 2-82 303-393 (542)
104 PRK08008 caiC putative crotono 99.1 4.5E-10 9.8E-15 73.8 8.1 77 4-81 288-373 (517)
105 PRK07824 O-succinylbenzoic aci 99.1 3.8E-10 8.3E-15 71.4 6.7 64 3-82 150-215 (358)
106 PRK08308 acyl-CoA synthetase; 99.1 7.3E-10 1.6E-14 71.4 7.1 74 5-81 213-288 (414)
107 KOG1175|consensus 99.1 5.7E-10 1.2E-14 75.5 6.8 80 3-82 358-449 (626)
108 PRK06164 acyl-CoA synthetase; 99.0 1.3E-09 2.8E-14 72.1 7.6 82 2-83 292-386 (540)
109 TIGR03335 F390_ftsA coenzyme F 99.0 2.2E-09 4.7E-14 70.4 7.9 73 4-81 204-285 (445)
110 TIGR02155 PA_CoA_ligase phenyl 99.0 3.3E-09 7.1E-14 68.8 8.5 77 4-82 195-281 (422)
111 PRK05850 acyl-CoA synthetase; 99.0 1E-09 2.2E-14 73.2 6.3 81 2-83 286-406 (578)
112 PRK06178 acyl-CoA synthetase; 99.0 3.3E-09 7.2E-14 70.7 8.0 81 3-83 324-423 (567)
113 PLN02479 acetate-CoA ligase 98.9 7.1E-09 1.5E-13 69.3 7.7 81 2-82 308-410 (567)
114 PRK07868 acyl-CoA synthetase; 98.9 7.4E-09 1.6E-13 73.4 7.4 76 3-82 719-817 (994)
115 PRK07798 acyl-CoA synthetase; 98.9 2.2E-08 4.8E-13 65.8 8.6 77 2-80 294-383 (533)
116 PLN03102 acyl-activating enzym 98.8 3.4E-08 7.4E-13 66.3 7.6 39 4-42 300-340 (579)
117 PRK13388 acyl-CoA synthetase; 98.8 5.8E-08 1.3E-12 64.6 8.0 74 5-82 266-360 (540)
118 PRK07867 acyl-CoA synthetase; 98.8 4.6E-08 1E-12 65.0 7.3 73 4-82 267-361 (529)
119 PRK08162 acyl-CoA synthetase; 98.7 1.6E-07 3.4E-12 62.3 8.2 79 4-82 296-396 (545)
120 COG1541 PaaK Coenzyme F390 syn 98.7 9.1E-08 2E-12 62.8 6.8 75 4-81 210-293 (438)
121 COG1020 EntF Non-ribosomal pep 98.4 1.6E-06 3.5E-11 58.8 7.2 78 5-82 486-575 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 98.1 5.3E-06 1.1E-10 53.9 3.6 57 3-65 205-264 (386)
123 PRK08279 long-chain-acyl-CoA s 98.0 3.2E-05 7E-10 52.2 6.8 52 4-60 314-369 (600)
124 PTZ00297 pantothenate kinase; 97.8 8.3E-05 1.8E-09 55.2 5.8 73 1-82 755-833 (1452)
125 TIGR02304 aden_form_hyp probab 97.7 0.00023 5E-09 47.1 6.3 40 5-45 213-255 (430)
126 KOG1179|consensus 92.8 0.55 1.2E-05 32.8 5.8 30 13-42 364-397 (649)
127 PF04443 LuxE: Acyl-protein sy 92.3 0.6 1.3E-05 30.7 5.4 31 15-45 238-276 (365)
128 COG2875 CobM Precorrin-4 methy 74.1 4.6 9.9E-05 25.3 2.8 32 5-36 28-60 (254)
129 KOG3628|consensus 69.8 6.1 0.00013 30.2 3.0 28 56-83 1156-1189(1363)
130 KOG3628|consensus 60.7 12 0.00026 28.8 3.0 23 61-83 511-539 (1363)
131 PF01060 DUF290: Transthyretin 54.4 22 0.00048 18.0 2.7 16 55-70 7-22 (80)
132 PF00818 Ice_nucleation: Ice n 52.0 7.5 0.00016 13.8 0.5 9 32-40 1-9 (16)
133 PF04915 DltD_N: DltD N-termin 46.6 17 0.00037 17.9 1.4 15 25-39 26-40 (62)
134 PRK13584 hisG ATP phosphoribos 40.4 71 0.0015 19.6 3.7 21 25-45 125-145 (204)
135 PRK01686 hisG ATP phosphoribos 39.5 85 0.0018 19.4 4.0 20 25-44 135-154 (215)
136 PF11974 MG1: Alpha-2-macroglo 36.5 60 0.0013 17.1 2.8 16 53-68 22-37 (97)
137 PF07210 DUF1416: Protein of u 35.5 60 0.0013 17.0 2.5 17 54-70 16-32 (85)
138 PF13241 NAD_binding_7: Putati 35.0 28 0.00061 18.3 1.4 29 1-29 3-33 (103)
139 PF05726 Pirin_C: Pirin C-term 31.3 9.8 0.00021 20.3 -0.8 21 4-24 61-81 (104)
140 PRK13399 fructose-1,6-bisphosp 31.1 62 0.0014 21.5 2.6 33 6-38 227-261 (347)
141 PF13213 DUF4021: Protein of u 29.2 24 0.00051 16.2 0.4 11 29-39 26-36 (46)
142 KOG2531|consensus 29.1 88 0.0019 22.0 3.1 29 4-32 442-473 (545)
143 COG0040 HisG ATP phosphoribosy 27.2 49 0.0011 21.5 1.6 21 25-45 136-156 (290)
144 PF06543 Lac_bphage_repr: Lact 27.0 46 0.00099 15.5 1.1 17 8-24 23-39 (49)
145 PRK04031 DNA primase; Provisio 26.7 43 0.00094 22.8 1.4 48 30-81 27-74 (408)
146 PF13620 CarboxypepD_reg: Carb 25.7 79 0.0017 15.4 2.0 15 55-69 10-24 (82)
147 PF09866 DUF2093: Uncharacteri 23.1 93 0.002 14.1 2.1 30 7-37 8-37 (42)
148 PF01634 HisG: ATP phosphoribo 22.9 33 0.00071 20.2 0.3 19 25-43 87-105 (163)
149 PRK06719 precorrin-2 dehydroge 21.7 78 0.0017 18.2 1.7 23 2-24 10-32 (157)
150 PF07505 Gp37_Gp68: Phage prot 21.2 1.8E+02 0.0039 18.6 3.3 33 2-34 185-230 (261)
151 PF07085 DRTGG: DRTGG domain; 21.1 1.3E+02 0.0029 15.7 2.4 22 9-30 66-89 (105)
152 PF10727 Rossmann-like: Rossma 21.0 1.6E+02 0.0034 16.5 2.8 35 4-38 9-45 (127)
153 PF04016 DUF364: Domain of unk 20.5 39 0.00085 19.3 0.3 35 4-38 61-99 (147)
No 1
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.71 E-value=3.3e-17 Score=109.91 Aligned_cols=77 Identities=42% Similarity=0.739 Sum_probs=71.0
Q ss_pred CCCCceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCCCCCcceEE
Q psy2847 1 MGLDRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEIC 78 (83)
Q Consensus 1 ~~l~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~~g~~Gei~ 78 (83)
+| .++|++++||+++++++...+ .++++.+.|||||++++++..++...+.+++|+|+|++++++.| .|||+
T Consensus 351 lG-gri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~~~~~gtvG~p~p~~evKI~d-----~GEil 424 (613)
T COG1022 351 LG-GRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPDRFVLGTVGKPLPGIEVKIAD-----DGEIL 424 (613)
T ss_pred hC-CcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEccccCcccCCcCCcCCCceEEEcc-----CceEE
Confidence 35 689999999999999999999 79999999999999999888887778889999999999999999 69999
Q ss_pred EecCC
Q psy2847 79 LKDLI 83 (83)
Q Consensus 79 ~~~~~ 83 (83)
+|||+
T Consensus 425 VRG~~ 429 (613)
T COG1022 425 VRGPN 429 (613)
T ss_pred Eecch
Confidence 99974
No 2
>KOG1256|consensus
Probab=99.67 E-value=4e-16 Score=105.05 Aligned_cols=82 Identities=34% Similarity=0.659 Sum_probs=69.1
Q ss_pred CCCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC------C
Q psy2847 1 MGLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD------E 71 (83)
Q Consensus 1 ~~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~------~ 71 (83)
|| .++|.+++|+||+++++.+.+ .++.+++.||+||+++.++.....+...+++|.|+|+++++++|.. .
T Consensus 417 LG-g~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~ 495 (691)
T KOG1256|consen 417 LG-GNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLPGDNVLGSVGPPVPGNEVKLVDVPEMNYDAD 495 (691)
T ss_pred hc-CceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccCCCCCCCCcCCcccCceEEEechHHhCcCcC
Confidence 35 689999999999999999988 6799999999999996655554444578999999999999997743 3
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
+..|||++||++
T Consensus 496 ~~~GEIcirG~~ 507 (691)
T KOG1256|consen 496 GSKGEICVRGPN 507 (691)
T ss_pred CCcceEEEecch
Confidence 457999999985
No 3
>KOG1176|consensus
Probab=99.64 E-value=1.5e-15 Score=100.95 Aligned_cols=82 Identities=30% Similarity=0.486 Sum_probs=71.6
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cC-CeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-----C
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LD-IAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD-----E 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~-~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~-----~ 71 (83)
+++++|.+++||+++++++.+++ ++ ..+.+.|||||+++..+.+.... .+.+++|+++++.+.++.++. +
T Consensus 297 ~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~ 376 (537)
T KOG1176|consen 297 DLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGP 376 (537)
T ss_pred cCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCC
Confidence 57899999999999999999998 66 88999999999998877776554 488999999999998888875 5
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
++.|||++||++
T Consensus 377 ~~~GEI~vrg~~ 388 (537)
T KOG1176|consen 377 NQTGEICVRGPQ 388 (537)
T ss_pred CCceEEEEECcc
Confidence 789999999974
No 4
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.63 E-value=1.2e-15 Score=103.69 Aligned_cols=80 Identities=30% Similarity=0.433 Sum_probs=66.5
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECC-C--------C
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDP-D--------E 71 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~-~--------~ 71 (83)
+++|.+++||+|+++++.+.+ ++.++++.||+||+++.++.....+...+++|+|+++++++++|. + +
T Consensus 420 ~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~ 499 (696)
T PLN02387 420 GRIRFMLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKP 499 (696)
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEeechhhcccceeecCcccCCCCccCCCCCceEEEEeeccccCcccCCCC
Confidence 589999999999999998776 688999999999998766655444456789999999999999983 2 2
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
+..|||++|||+
T Consensus 500 ~p~GEi~vrGp~ 511 (696)
T PLN02387 500 MPRGEIVIGGPS 511 (696)
T ss_pred CCCceEEeccCc
Confidence 246999999974
No 5
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.63 E-value=2.5e-15 Score=103.10 Aligned_cols=80 Identities=24% Similarity=0.395 Sum_probs=67.3
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCc-CCcEEEEECCC------CCC
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTI-PGTQTKIVDPD------EEG 73 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~-~~~~~~v~d~~------~g~ 73 (83)
++||.+++||+|+++++.+++ ++..+++.||+||+++..+.......+.+++|+|+ ++++++++|.+ ...
T Consensus 461 ~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~ 540 (746)
T PTZ00342 461 PNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHADDNNTESIGGPISPNTKYKVRTWETYKATDTLP 540 (746)
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCCCCCcccccCcCCCcEEEEEecccccccCCCCC
Confidence 689999999999999999998 78899999999999876665544445678999998 99999999833 235
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||++|||+
T Consensus 541 ~GEl~vrGp~ 550 (746)
T PTZ00342 541 KGELLIKSDS 550 (746)
T ss_pred ceEEEEecCc
Confidence 7999999974
No 6
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.62 E-value=1.3e-15 Score=97.39 Aligned_cols=82 Identities=30% Similarity=0.560 Sum_probs=67.1
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCC-eEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCC-----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDI-AICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD----- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~-~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~----- 70 (83)
+++++|.++++|+++++++.+++ ++. .+++.||+||++.++....... .+.+++|.|+++++++|+|++
T Consensus 275 ~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~ 354 (417)
T PF00501_consen 275 DLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPL 354 (417)
T ss_dssp TGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBE
T ss_pred ccccccccccccccCChhhccccccccccccceecccccccceeeecccccccccccccccccccccccccccccccccc
Confidence 46789999999999999999998 565 8999999999998876552222 466789999999999999976
Q ss_pred -CCCcceEEEecCC
Q psy2847 71 -EEGNGEICLKDLI 83 (83)
Q Consensus 71 -~g~~Gei~~~~~~ 83 (83)
.++.|||++++|+
T Consensus 355 ~~g~~Gei~i~~~~ 368 (417)
T PF00501_consen 355 PPGEPGEIVIRGPN 368 (417)
T ss_dssp STTSEEEEEEESTT
T ss_pred cccccccccccCCc
Confidence 4788999999974
No 7
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.62 E-value=2.2e-15 Score=99.96 Aligned_cols=79 Identities=24% Similarity=0.378 Sum_probs=66.2
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC-----CCC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD-----EEG 73 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~-----~g~ 73 (83)
++++||.+.++|+|++++.++++ +++++.+.||+||++.+.....+ ..+.++.|+|+|++++.++|++ +++
T Consensus 288 dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~-~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~ 366 (528)
T COG0365 288 DLSSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP-PVKNGSSGLPLPGYAVRRVDDEGNPVPPGV 366 (528)
T ss_pred cchhheeeeccCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC-CcCCCCCCCCCCCceeEEECCCCCcCCCCc
Confidence 57899999999999999999999 78999999999999955443323 3355666999999999999986 356
Q ss_pred cceEEEecC
Q psy2847 74 NGEICLKDL 82 (83)
Q Consensus 74 ~Gei~~~~~ 82 (83)
|+|+++.|
T Consensus 367 -G~Lvi~~~ 374 (528)
T COG0365 367 -GELVVRLP 374 (528)
T ss_pred -eEEEEeCC
Confidence 99999976
No 8
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.61 E-value=6e-15 Score=97.70 Aligned_cols=82 Identities=21% Similarity=0.298 Sum_probs=67.0
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC------
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD------ 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~------ 70 (83)
++++||.+++||+++++++.+++ + +..+++.||+||++.+++...... ....++|+|+++++++++|++
T Consensus 297 ~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~ 376 (539)
T PRK06334 297 CLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVS 376 (539)
T ss_pred ccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCC
Confidence 35789999999999999999888 4 678999999999987665543322 345679999999999999864
Q ss_pred CCCcceEEEecCC
Q psy2847 71 EEGNGEICLKDLI 83 (83)
Q Consensus 71 ~g~~Gei~~~~~~ 83 (83)
.|+.|||+++|++
T Consensus 377 ~g~~Gel~v~g~~ 389 (539)
T PRK06334 377 SGETGLVLTRGTS 389 (539)
T ss_pred CCceEEEEEecCc
Confidence 4688999999873
No 9
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.59 E-value=7.9e-15 Score=97.28 Aligned_cols=81 Identities=27% Similarity=0.511 Sum_probs=68.4
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC-----CCCc
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD-----EEGN 74 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~-----~g~~ 74 (83)
++++|.+++||+++++++.++| ++.++++.||+||++.++........+.+++|+|+++++++++|++ .|+.
T Consensus 325 ~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~ 404 (562)
T PRK05677 325 FSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQAIQVGTIGIPVPSTLCKVIDDDGNELPLGEV 404 (562)
T ss_pred hhhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccccCcceeecCccCCCCCccCccCCCCEEEEECCCCCCCCCCCC
Confidence 4689999999999999999888 6889999999999987665554433456789999999999999976 4678
Q ss_pred ceEEEecCC
Q psy2847 75 GEICLKDLI 83 (83)
Q Consensus 75 Gei~~~~~~ 83 (83)
|||++++++
T Consensus 405 Gel~v~g~~ 413 (562)
T PRK05677 405 GELCVKGPQ 413 (562)
T ss_pred eEEEEecCc
Confidence 999999873
No 10
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.59 E-value=5.5e-15 Score=99.85 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=66.5
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
++++||.++++|+++++++.+++ ++..+++.||+||++..+....... ...+++|+|+++++++++|++ .|
T Consensus 378 ~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~g 457 (647)
T PTZ00237 378 DLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILSEDGKELNVN 457 (647)
T ss_pred CcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEECCCCCCCCCC
Confidence 46799999999999999999888 6888999999999986544322222 334789999999999999976 46
Q ss_pred CcceEEEecC
Q psy2847 73 GNGEICLKDL 82 (83)
Q Consensus 73 ~~Gei~~~~~ 82 (83)
+.|||++++|
T Consensus 458 e~GEl~v~~p 467 (647)
T PTZ00237 458 EIGEVAFKLP 467 (647)
T ss_pred CceEEEEecc
Confidence 8899999975
No 11
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.58 E-value=6.9e-15 Score=99.24 Aligned_cols=80 Identities=28% Similarity=0.412 Sum_probs=66.3
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC---------C
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD---------E 71 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~---------~ 71 (83)
+++|.+++||+++++++.+++ ++..+++.||+||+++.++.......+.+++|+|+++++++++|.+ +
T Consensus 376 ~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~ 455 (651)
T PLN02736 376 GRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQP 455 (651)
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCCCCCCCccCCccCceEEEEEEccccCcccCCCC
Confidence 489999999999999999988 6888999999999987665544434566889999999999999832 2
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
++.|||++|||+
T Consensus 456 ~~~GEl~vrgp~ 467 (651)
T PLN02736 456 YPRGEICVRGPI 467 (651)
T ss_pred CCCceEEecCCc
Confidence 246999999974
No 12
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.58 E-value=8.8e-15 Score=97.09 Aligned_cols=79 Identities=41% Similarity=0.649 Sum_probs=66.9
Q ss_pred ceEEEEEecCCCCHHHHHHh---cC-CeEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCCC-----CC
Q psy2847 5 RCRVSLSGAAAISTELKRYF---LD-IAICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPDE-----EG 73 (83)
Q Consensus 5 ~lr~~~~gg~~~~~~~~~~~---~~-~~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~~-----g~ 73 (83)
++|.+++||+++++++++++ ++ ..+++.||+||+++.++...... .+.+.+|+|+++++++|+|++. |+
T Consensus 292 ~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~pg~ 371 (534)
T COG0318 292 SLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLPGE 371 (534)
T ss_pred ceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCCCC
Confidence 39999999999999999999 55 47999999999997776665543 3567789999999999999763 56
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||++|||+
T Consensus 372 vGei~irgp~ 381 (534)
T COG0318 372 VGEIWVRGPN 381 (534)
T ss_pred ceEEEEECch
Confidence 8999999985
No 13
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.58 E-value=1.2e-14 Score=98.97 Aligned_cols=82 Identities=27% Similarity=0.488 Sum_probs=68.5
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC-CCCcceE
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD-EEGNGEI 77 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~-~g~~Gei 77 (83)
++++||.+++||+++++++.+++ ++..+++.||+||++..+........+.+++|+|+++++++++|++ .++.|||
T Consensus 477 ~~~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~~~i~d~~~~~~~Gel 556 (718)
T PRK08043 477 DFARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEQGGRL 556 (718)
T ss_pred cccceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCcccCCCCCCCcCCCCeeEEecCCCCCCceEE
Confidence 46789999999999999999888 7889999999999987655443333456899999999999999876 4567999
Q ss_pred EEecCC
Q psy2847 78 CLKDLI 83 (83)
Q Consensus 78 ~~~~~~ 83 (83)
+++|++
T Consensus 557 ~v~g~~ 562 (718)
T PRK08043 557 QLKGPN 562 (718)
T ss_pred EEecCC
Confidence 999974
No 14
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.57 E-value=1e-14 Score=96.39 Aligned_cols=81 Identities=22% Similarity=0.271 Sum_probs=66.4
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-----CCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD-----EEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~-----~g~ 73 (83)
++++|.+++||+++++++.+++ ++..+++.||+||++..+.....+. ...+++|+|+++++++++|++ .|+
T Consensus 322 ~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~ 401 (549)
T PRK07788 322 TSSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGV 401 (549)
T ss_pred CCceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCC
Confidence 5789999999999999999988 6788999999999875544332221 345789999999999999976 478
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||+++|+.
T Consensus 402 ~Gel~v~g~~ 411 (549)
T PRK07788 402 VGRIFVGNGF 411 (549)
T ss_pred eEEEEEeCCC
Confidence 8999999863
No 15
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.57 E-value=7.4e-15 Score=99.94 Aligned_cols=79 Identities=24% Similarity=0.490 Sum_probs=65.0
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC-------CCC
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD-------EEG 73 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~-------~g~ 73 (83)
+++|.+++||+++++++.+++ ++ .+++.||+||+++..+.........+++|+|+++++++++|++ +++
T Consensus 428 ~~lr~i~~GGa~l~~~~~~~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~ 506 (700)
T PTZ00216 428 GRVRAMLSGGGPLSAATQEFVNVVFG-MVIQGWGLTETVCCGGIQRTGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEP 506 (700)
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHhh-hHhhccCcccccccccccCCCCCCCCCcCCcCCCeEEEEeechhhccCCCCCC
Confidence 579999999999999998776 56 8999999999976655444333456899999999999999864 245
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||+++||+
T Consensus 507 ~GEL~vrG~~ 516 (700)
T PTZ00216 507 RGEILLRGPF 516 (700)
T ss_pred CceEEEcCCc
Confidence 7999999974
No 16
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.56 E-value=2.7e-14 Score=94.80 Aligned_cols=82 Identities=24% Similarity=0.452 Sum_probs=67.9
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
+++++|.+++||+++++++.++| ++.++++.||+||++.++....... .+.+++|+|+++++++++|++ .+
T Consensus 331 ~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g 410 (562)
T PRK12492 331 DFSALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVIDDDGNELPLG 410 (562)
T ss_pred cccceeEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcccccCCccceecCCCEEEEECCCCCCCCCC
Confidence 35789999999999999999888 7889999999999987665443322 345789999999999999976 46
Q ss_pred CcceEEEecCC
Q psy2847 73 GNGEICLKDLI 83 (83)
Q Consensus 73 ~~Gei~~~~~~ 83 (83)
+.|||+++|+.
T Consensus 411 ~~Gel~v~g~~ 421 (562)
T PRK12492 411 ERGELCIKGPQ 421 (562)
T ss_pred CceEEEEeCCc
Confidence 78999999863
No 17
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.56 E-value=2e-14 Score=95.00 Aligned_cols=81 Identities=20% Similarity=0.283 Sum_probs=66.7
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC-CcccCceecCcCCcEEEEECCC-----CCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD-DFKLDGVGRTIPGTQTKIVDPD-----EEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~g~p~~~~~~~v~d~~-----~g~ 73 (83)
++++|.+++||++++++++++| ++..+++.||+||++.++...... ....+++|+|+++++++++|++ .|+
T Consensus 311 ~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~ 390 (537)
T PRK13382 311 GRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGE 390 (537)
T ss_pred ccceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCC
Confidence 3579999999999999999988 677899999999998765543322 2446789999999999999986 367
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||++++++
T Consensus 391 ~GEl~v~g~~ 400 (537)
T PRK13382 391 VGTIFVRNDT 400 (537)
T ss_pred eeEEEEEcCC
Confidence 8999999873
No 18
>PRK07529 AMP-binding domain protein; Validated
Probab=99.56 E-value=2.1e-14 Score=96.66 Aligned_cols=82 Identities=27% Similarity=0.511 Sum_probs=67.3
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEE--CCC-----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIV--DPD----- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~--d~~----- 70 (83)
+++++|.+++||+++++++.+++ ++.++++.||+||++.++.....+. .+.+++|+|+++++++++ |++
T Consensus 331 ~~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~ 410 (632)
T PRK07529 331 DISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLR 410 (632)
T ss_pred CccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccc
Confidence 46789999999999999999988 7889999999999987665554332 467889999999998885 443
Q ss_pred ---CCCcceEEEecCC
Q psy2847 71 ---EEGNGEICLKDLI 83 (83)
Q Consensus 71 ---~g~~Gei~~~~~~ 83 (83)
.|+.|||+++||+
T Consensus 411 ~~~~g~~Gel~v~gp~ 426 (632)
T PRK07529 411 DCAVDEVGVLCIAGPN 426 (632)
T ss_pred cCCCCCceEEEEECCC
Confidence 3678999999874
No 19
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.55 E-value=2.3e-14 Score=97.17 Aligned_cols=80 Identities=26% Similarity=0.560 Sum_probs=62.3
Q ss_pred CceEEEEEecCCCCHHHHHHh--c-CCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEEC-CC-------C
Q psy2847 4 DRCRVSLSGAAAISTELKRYF--L-DIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVD-PD-------E 71 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~--~-~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d-~~-------~ 71 (83)
+++|.+++||+++++++.+.+ + +..+++.||+||++..+......+ .+.+++|+|+++++++++| ++ .
T Consensus 386 ~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~ 465 (666)
T PLN02614 386 GNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALAS 465 (666)
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCC
Confidence 689999999999998764443 4 578999999999876554433322 3568999999999999997 22 3
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
++.|||++|||+
T Consensus 466 g~~GEl~vrGp~ 477 (666)
T PLN02614 466 TPRGEICIRGKT 477 (666)
T ss_pred CCCceEEEcCCc
Confidence 578999999984
No 20
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.55 E-value=3.5e-14 Score=96.51 Aligned_cols=81 Identities=21% Similarity=0.418 Sum_probs=66.4
Q ss_pred CCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC-----CCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD-----EEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~-----~g~ 73 (83)
++++|.+++||+++++++.+++ + +.++++.||+||++..+........+.+++|+|+++++++++|++ .|+
T Consensus 259 ~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~ 338 (705)
T PRK06060 259 FRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDEWRLGTLGRVLPPYEIRVVAPDGTTAGPGV 338 (705)
T ss_pred ccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCCCCCcCcccccCCCcEEEEECCCCCCCCCCC
Confidence 5689999999999999999888 4 578999999999976544333333456789999999999999976 467
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||+++|++
T Consensus 339 ~GEl~i~g~~ 348 (705)
T PRK06060 339 EGDLWVRGPA 348 (705)
T ss_pred ceEEEEccch
Confidence 8999999863
No 21
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.54 E-value=6.5e-14 Score=92.64 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=66.4
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCC-----CC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
++++|.+++||+++++++.+++ ++.++++.||+||++..+....... ....++|+|+++++++++|++ .|
T Consensus 311 ~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g 390 (547)
T PRK13295 311 VSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAG 390 (547)
T ss_pred cccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCC
Confidence 5689999999999999999988 7889999999999986654433221 234678999999999999976 36
Q ss_pred CcceEEEecCC
Q psy2847 73 GNGEICLKDLI 83 (83)
Q Consensus 73 ~~Gei~~~~~~ 83 (83)
+.|||+++++.
T Consensus 391 ~~Gel~v~g~~ 401 (547)
T PRK13295 391 QIGRLQVRGCS 401 (547)
T ss_pred CCCeEEEEcCc
Confidence 78999999863
No 22
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.54 E-value=4.9e-14 Score=99.09 Aligned_cols=82 Identities=29% Similarity=0.481 Sum_probs=67.5
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC----------CcccCceecCcCCcEEEEEC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD----------DFKLDGVGRTIPGTQTKIVD 68 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~----------~~~~~~~g~p~~~~~~~v~d 68 (83)
+++++|.+++||+++++++.+++ ++.++++.||+||++..++....+ ..+.+++|+|+++++++++|
T Consensus 896 ~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d 975 (1146)
T PRK08633 896 MFASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVD 975 (1146)
T ss_pred cCCCeeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEc
Confidence 36789999999999999999988 688999999999998766543221 12457899999999999999
Q ss_pred CC------CCCcceEEEecCC
Q psy2847 69 PD------EEGNGEICLKDLI 83 (83)
Q Consensus 69 ~~------~g~~Gei~~~~~~ 83 (83)
++ .|+.|||+++|++
T Consensus 976 ~~~~~~~~~g~~Gel~v~g~~ 996 (1146)
T PRK08633 976 PETFEELPPGEDGLILIGGPQ 996 (1146)
T ss_pred CCCCccCCCCCceEEEEcCCC
Confidence 64 4788999999874
No 23
>KOG1180|consensus
Probab=99.53 E-value=2.2e-14 Score=94.90 Aligned_cols=80 Identities=30% Similarity=0.493 Sum_probs=70.0
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC-C-----C--
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD-E-----E-- 72 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~-~-----g-- 72 (83)
-+||++++||+|+++++.+.+ +..++.+.||.||+...++....++...+.+|.|++.++++++|.. . +
T Consensus 402 G~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~P 481 (678)
T KOG1180|consen 402 GNLRYILSGGAPLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKP 481 (678)
T ss_pred CceEEEEeCCCCCCHHHHHHHHHhccccccccccccchhcccEecChhhcccccccCCccceEEEEEEhhhcCccCCCCC
Confidence 479999999999999998888 7889999999999988888777777777899999999999999954 1 2
Q ss_pred CcceEEEecCC
Q psy2847 73 GNGEICLKDLI 83 (83)
Q Consensus 73 ~~Gei~~~~~~ 83 (83)
.+|||+++|++
T Consensus 482 PrGEI~i~G~~ 492 (678)
T KOG1180|consen 482 PRGEILIGGPN 492 (678)
T ss_pred CCceEEecCCc
Confidence 48999999975
No 24
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.53 E-value=4.4e-14 Score=94.95 Aligned_cols=79 Identities=23% Similarity=0.297 Sum_probs=64.0
Q ss_pred CCceEEEEEecCCCCHHHHHHh--c-------CCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCCCCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF--L-------DIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~--~-------~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~~g~ 73 (83)
+++||.+++||+++++++.+++ . +..+++.||+||++.++........+.+++|+|++++++++++ .|+
T Consensus 345 ~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~--~G~ 422 (624)
T PRK12582 345 FKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAP--VGD 422 (624)
T ss_pred hhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEcc--CCC
Confidence 4689999999999999999887 2 3579999999999766543322234567899999999999985 467
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||+++|++
T Consensus 423 ~GEl~vrg~~ 432 (624)
T PRK12582 423 KYEVRVKGPN 432 (624)
T ss_pred ceEEEEECCc
Confidence 8999999974
No 25
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.53 E-value=8e-14 Score=92.67 Aligned_cols=80 Identities=26% Similarity=0.456 Sum_probs=66.4
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC-CcccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD-DFKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
+++++|.++++|+++++++.+++ ++.++++.||+||++..+...... ....+++|+|.++++++++|++ .|
T Consensus 321 ~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g 400 (570)
T PRK04319 321 DLSSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPN 400 (570)
T ss_pred CcccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCC
Confidence 35789999999999999999888 788899999999998765433222 2456789999999999999976 47
Q ss_pred CcceEEEec
Q psy2847 73 GNGEICLKD 81 (83)
Q Consensus 73 ~~Gei~~~~ 81 (83)
+.|||++++
T Consensus 401 ~~Gel~i~~ 409 (570)
T PRK04319 401 RMGNLAIKK 409 (570)
T ss_pred CceEEEEcC
Confidence 889999986
No 26
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.52 E-value=8.7e-14 Score=93.38 Aligned_cols=79 Identities=23% Similarity=0.306 Sum_probs=64.5
Q ss_pred CCceEEEEEecCCCCHHHHHHh-------cC--CeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCCCCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF-------LD--IAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~-------~~--~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~~g~ 73 (83)
+++||.+++||+++++++.+++ ++ ..+++.||+||++.++........+.+++|+|+++++++++|+ +.
T Consensus 333 ~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~d~--~~ 410 (614)
T PRK08180 333 FSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGPLSRAGNIGLPAPGCEVKLVPV--GG 410 (614)
T ss_pred ccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccccCCCCcccCccCCcEEEEecC--CC
Confidence 5789999999999999998876 12 5789999999998766554333356689999999999999985 45
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||+++||+
T Consensus 411 ~GEi~vrg~~ 420 (614)
T PRK08180 411 KLEVRVKGPN 420 (614)
T ss_pred CcEEEEecCc
Confidence 7999999874
No 27
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.52 E-value=8.5e-14 Score=91.49 Aligned_cols=81 Identities=20% Similarity=0.327 Sum_probs=65.9
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC-CcccCceecCcCCcEEEEECCC-----CCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD-DFKLDGVGRTIPGTQTKIVDPD-----EEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~g~p~~~~~~~v~d~~-----~g~ 73 (83)
++++|.+++||+++++++.+++ ++..+++.||+||++..+...... ....+++|+|+++++++++|++ .++
T Consensus 291 ~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~ 370 (516)
T PRK13383 291 LPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRV 370 (516)
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCC
Confidence 4689999999999999999988 788899999999997655433322 1345789999999999999865 367
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||+++|+.
T Consensus 371 ~Gel~v~g~~ 380 (516)
T PRK13383 371 TGRIFVGGEL 380 (516)
T ss_pred ceEEEEecCc
Confidence 8999999863
No 28
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.52 E-value=6.7e-14 Score=92.26 Aligned_cols=81 Identities=23% Similarity=0.383 Sum_probs=67.3
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC------CCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD------EEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~------~g~ 73 (83)
++++|.+++||+++++++.+++ ++.++++.||+||++..+.....+.....++|+|+++++++++|++ .++
T Consensus 304 ~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~ 383 (546)
T PRK08314 304 LSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPDRPKLQCLGIPTFGVDARVIDPETLEELPPGE 383 (546)
T ss_pred chhhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccceecCCCcCCCCCccCcccCCeEEEEEeCCCCcCCCCCC
Confidence 5689999999999999999988 6888999999999987665544333455789999999999999854 367
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||++++++
T Consensus 384 ~Gel~v~g~~ 393 (546)
T PRK08314 384 VGEIVVHGPQ 393 (546)
T ss_pred ceEEEEECCc
Confidence 8999999863
No 29
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.52 E-value=1e-13 Score=93.21 Aligned_cols=81 Identities=12% Similarity=0.186 Sum_probs=65.4
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC----CcccCceecCcCCcEEEEECCC----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD----DFKLDGVGRTIPGTQTKIVDPD---- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~----~~~~~~~g~p~~~~~~~v~d~~---- 70 (83)
++++||.+++||+++++++.+++ ++..+++.||+||++..+...... ..+.+++|+|+++++++++|++
T Consensus 352 ~l~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~ 431 (628)
T TIGR02316 352 DLSSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRP 431 (628)
T ss_pred CccceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCC
Confidence 46799999999999999998887 688899999999998543322111 1345788999999999999973
Q ss_pred --CCCcceEEEecC
Q psy2847 71 --EEGNGEICLKDL 82 (83)
Q Consensus 71 --~g~~Gei~~~~~ 82 (83)
.++.|||++++|
T Consensus 432 ~~~g~~Gel~v~gp 445 (628)
T TIGR02316 432 CGPNEKGVLTVVPP 445 (628)
T ss_pred CCCCCcEEEEEecC
Confidence 367899999987
No 30
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.51 E-value=1.5e-13 Score=89.57 Aligned_cols=82 Identities=22% Similarity=0.323 Sum_probs=67.6
Q ss_pred CCCceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
+++++|.+++||+++++++.+++ .+.++.+.||+||++..+....... .+.+++|+|+++++++++|++ .|
T Consensus 262 ~~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g 341 (496)
T PRK06839 262 NLQSVRWFYNGGAPCPEELMREFIDRGFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVG 341 (496)
T ss_pred CCcccceEEECCCCCCHHHHHHHHHhCCeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCC
Confidence 35789999999999999999988 6788999999999986554333222 456789999999999999976 47
Q ss_pred CcceEEEecCC
Q psy2847 73 GNGEICLKDLI 83 (83)
Q Consensus 73 ~~Gei~~~~~~ 83 (83)
+.|||++++++
T Consensus 342 ~~Gel~v~~~~ 352 (496)
T PRK06839 342 EVGELLIRGPN 352 (496)
T ss_pred CceEEEEECCC
Confidence 88999999874
No 31
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.51 E-value=1.2e-13 Score=91.80 Aligned_cols=81 Identities=21% Similarity=0.261 Sum_probs=64.7
Q ss_pred CCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCCC-----------------------cccCce
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPDD-----------------------FKLDGV 55 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~~-----------------------~~~~~~ 55 (83)
++++|.+++||+++++++.+++ + +..+++.||+||++..+....... ....++
T Consensus 287 ~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 366 (563)
T PLN02860 287 FPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCV 366 (563)
T ss_pred ccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCccc
Confidence 5689999999999999999888 4 688999999999875443221100 112368
Q ss_pred ecCcCCcEEEEECCCCCCcceEEEecCC
Q psy2847 56 GRTIPGTQTKIVDPDEEGNGEICLKDLI 83 (83)
Q Consensus 56 g~p~~~~~~~v~d~~~g~~Gei~~~~~~ 83 (83)
|+|+++++++++++++++.|||+++|++
T Consensus 367 G~p~~~~~v~i~~~~~g~~Gel~v~g~~ 394 (563)
T PLN02860 367 GKPAPHVELKIGLDESSRVGRILTRGPH 394 (563)
T ss_pred CCccCCcEEEEecCCCCceeEEEEecCc
Confidence 9999999999999888899999999874
No 32
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.50 E-value=1.3e-13 Score=90.58 Aligned_cols=81 Identities=17% Similarity=0.150 Sum_probs=62.5
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c--CCeEecccCccccccceeecCC-CCcccCceecCcCCcEEEEECCC-----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L--DIAICEVFGMSECAGAHTVSAP-DDFKLDGVGRTIPGTQTKIVDPD----- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~--~~~~~~~yG~tE~~~~~~~~~~-~~~~~~~~g~p~~~~~~~v~d~~----- 70 (83)
++++||.+++||++++++..+++ + +..+++.||+||++..+..... ...+.+++|+|.++++++|+|++
T Consensus 234 ~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~ 313 (499)
T PLN03051 234 DWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYP 313 (499)
T ss_pred CchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCC
Confidence 45789999999999999888766 2 2679999999998654332221 22345789999999999999976
Q ss_pred CC--CcceEEEecC
Q psy2847 71 EE--GNGEICLKDL 82 (83)
Q Consensus 71 ~g--~~Gei~~~~~ 82 (83)
.| +.|||+++||
T Consensus 314 ~g~~~~Gel~v~g~ 327 (499)
T PLN03051 314 DDQPCVGEVALAPP 327 (499)
T ss_pred CCCCcceEEEEecC
Confidence 23 4799999987
No 33
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.50 E-value=1.7e-13 Score=90.47 Aligned_cols=82 Identities=21% Similarity=0.307 Sum_probs=66.1
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCC-----C
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD-----E 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~-----~ 71 (83)
.++++|.+++||+++++++.+++ ++..+++.||+||++.+........ ....++|+|+++++++++|++ .
T Consensus 308 ~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~ 387 (538)
T TIGR03208 308 PVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQ 387 (538)
T ss_pred CCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcC
Confidence 35789999999999999999887 7888999999999976654433221 223578999999999999976 4
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
|+.|||+++++.
T Consensus 388 g~~Gel~v~g~~ 399 (538)
T TIGR03208 388 GETGRLLVRGCS 399 (538)
T ss_pred CCCcEEEEecCc
Confidence 678999999863
No 34
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.50 E-value=1.8e-13 Score=90.90 Aligned_cols=81 Identities=26% Similarity=0.325 Sum_probs=65.3
Q ss_pred CCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCC--CCcccCceecCcCCcEEEEECCC------
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAP--DDFKLDGVGRTIPGTQTKIVDPD------ 70 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~--~~~~~~~~g~p~~~~~~~v~d~~------ 70 (83)
++++|.+++||+++++++++++ + +..+++.||+||++.+...... ...+.+++|+|.++++++|+|++
T Consensus 318 ~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~ 397 (560)
T PLN02574 318 LKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLP 397 (560)
T ss_pred cccceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCC
Confidence 5789999999999999999887 4 6889999999999765432211 11456789999999999999953
Q ss_pred CCCcceEEEecCC
Q psy2847 71 EEGNGEICLKDLI 83 (83)
Q Consensus 71 ~g~~Gei~~~~~~ 83 (83)
.|+.|||+++|++
T Consensus 398 ~g~~Gei~v~g~~ 410 (560)
T PLN02574 398 PGNCGELWIQGPG 410 (560)
T ss_pred CCCCeEEEEECcc
Confidence 4778999999864
No 35
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.49 E-value=2.1e-13 Score=89.03 Aligned_cols=81 Identities=28% Similarity=0.462 Sum_probs=67.6
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCC-eEecccCccccccceeecCCCC-c--ccCceecCcCCcEEEEECCC----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDI-AICEVFGMSECAGAHTVSAPDD-F--KLDGVGRTIPGTQTKIVDPD---- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~-~~~~~yG~tE~~~~~~~~~~~~-~--~~~~~g~p~~~~~~~v~d~~---- 70 (83)
+++++|.+++||+++++++.+++ ++. .+++.||+||++.++..+.... . ..+++|+|+++++++++|++
T Consensus 279 ~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~ 358 (513)
T PRK07656 279 DLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEV 358 (513)
T ss_pred CccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCC
Confidence 35789999999999999999888 677 8999999999987776655432 2 25789999999999999876
Q ss_pred -CCCcceEEEecC
Q psy2847 71 -EEGNGEICLKDL 82 (83)
Q Consensus 71 -~g~~Gei~~~~~ 82 (83)
.|+.|||+++++
T Consensus 359 ~~g~~Gel~v~~~ 371 (513)
T PRK07656 359 PVGEVGELLVRGP 371 (513)
T ss_pred CCCCceEEEEEcc
Confidence 367899999986
No 36
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.49 E-value=1.1e-13 Score=93.79 Aligned_cols=80 Identities=23% Similarity=0.442 Sum_probs=61.3
Q ss_pred CceEEEEEecCCCCHHHHHHh--cC-CeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECC-C-------C
Q psy2847 4 DRCRVSLSGAAAISTELKRYF--LD-IAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDP-D-------E 71 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~--~~-~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~-~-------~ 71 (83)
.++|.+++||+|+++++.+.+ ++ ..+++.||+||+++.++...... .+.+++|+|+++++++++|. + .
T Consensus 383 ~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~ 462 (660)
T PLN02861 383 GRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSD 462 (660)
T ss_pred CcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccCCC
Confidence 579999999999999975544 45 46999999999976554332222 35689999999999999972 1 2
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
++.|||++|||+
T Consensus 463 ~~~GEi~vrGp~ 474 (660)
T PLN02861 463 VPRGEICLRGNT 474 (660)
T ss_pred CCceeEEEcCCc
Confidence 357999999974
No 37
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.49 E-value=1.5e-13 Score=92.25 Aligned_cols=81 Identities=11% Similarity=0.235 Sum_probs=65.1
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCcccccccee-ecCC-C--CcccCceecCcCCcEEEEECC-C---
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHT-VSAP-D--DFKLDGVGRTIPGTQTKIVDP-D--- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~-~~~~-~--~~~~~~~g~p~~~~~~~v~d~-~--- 70 (83)
++++||.++++|+++++++.+++ ++.++++.||+||++..+. .... . ..+.+++|+|+++++++++|+ +
T Consensus 353 ~l~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~ 432 (629)
T PRK10524 353 DLSSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEP 432 (629)
T ss_pred ChhheeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCC
Confidence 46789999999999999998887 7888999999999974332 2211 1 134578999999999999998 4
Q ss_pred --CCCcceEEEecC
Q psy2847 71 --EEGNGEICLKDL 82 (83)
Q Consensus 71 --~g~~Gei~~~~~ 82 (83)
.|+.|||++++|
T Consensus 433 ~~~g~~Gel~i~gp 446 (629)
T PRK10524 433 CGPNEKGVLVIEGP 446 (629)
T ss_pred CCCCCcEEEEEcCC
Confidence 467899999986
No 38
>PRK09274 peptide synthase; Provisional
Probab=99.49 E-value=1.4e-13 Score=90.99 Aligned_cols=82 Identities=23% Similarity=0.332 Sum_probs=64.1
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c--CCeEecccCccccccceeecCCC---------C-cccCceecCcCCcEEEE
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L--DIAICEVFGMSECAGAHTVSAPD---------D-FKLDGVGRTIPGTQTKI 66 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~--~~~~~~~yG~tE~~~~~~~~~~~---------~-~~~~~~g~p~~~~~~~v 66 (83)
+++++|.+++||+++++++.+++ + +..+++.||+||++.++...... . ....++|+|++++++++
T Consensus 286 ~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i 365 (552)
T PRK09274 286 KLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRI 365 (552)
T ss_pred CCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEE
Confidence 46789999999999999999988 5 46899999999998765433211 0 12236899999999999
Q ss_pred ECCC--------------CCCcceEEEecCC
Q psy2847 67 VDPD--------------EEGNGEICLKDLI 83 (83)
Q Consensus 67 ~d~~--------------~g~~Gei~~~~~~ 83 (83)
+|++ .|+.|||+++||+
T Consensus 366 vd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~ 396 (552)
T PRK09274 366 IAISDAPIPEWDDALRLATGEIGEIVVAGPM 396 (552)
T ss_pred EeccccccccccccccCCCCCeeEEEEecCc
Confidence 9841 3678999999874
No 39
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.49 E-value=2.8e-13 Score=90.97 Aligned_cols=81 Identities=19% Similarity=0.246 Sum_probs=65.8
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cC---CeEecccCccccccceeecCCC--CcccCceecCcCCcEEEEECCC---
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LD---IAICEVFGMSECAGAHTVSAPD--DFKLDGVGRTIPGTQTKIVDPD--- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~---~~~~~~yG~tE~~~~~~~~~~~--~~~~~~~g~p~~~~~~~v~d~~--- 70 (83)
++++||.++++|+++++++.+++ ++ .++++.||+||+++.+...... ..+.+++|+|+++++++++|++
T Consensus 356 ~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~ 435 (625)
T TIGR02188 356 DLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNP 435 (625)
T ss_pred CccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCC
Confidence 46789999999999999998877 33 6799999999998765433221 2456889999999999999965
Q ss_pred ---CCCcceEEEecC
Q psy2847 71 ---EEGNGEICLKDL 82 (83)
Q Consensus 71 ---~g~~Gei~~~~~ 82 (83)
.++.|||++++|
T Consensus 436 ~~~~g~~GeL~v~~p 450 (625)
T TIGR02188 436 VEGPGEGGYLVIKQP 450 (625)
T ss_pred CCCCCCeEEEEEccC
Confidence 367899999984
No 40
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.48 E-value=2.8e-13 Score=91.16 Aligned_cols=81 Identities=23% Similarity=0.387 Sum_probs=65.6
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cC---CeEecccCccccccceeecCCC--CcccCceecCcCCcEEEEECCC---
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LD---IAICEVFGMSECAGAHTVSAPD--DFKLDGVGRTIPGTQTKIVDPD--- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~---~~~~~~yG~tE~~~~~~~~~~~--~~~~~~~g~p~~~~~~~v~d~~--- 70 (83)
++++||.++++|+++++++.+++ ++ .++++.||+||++......... ..+.+++|+|+++++++++|++
T Consensus 365 ~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~ 444 (637)
T PRK00174 365 DLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNP 444 (637)
T ss_pred CccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCC
Confidence 46789999999999999998877 43 6799999999998765433221 2346789999999999999976
Q ss_pred --CCCcceEEEecC
Q psy2847 71 --EEGNGEICLKDL 82 (83)
Q Consensus 71 --~g~~Gei~~~~~ 82 (83)
.++.|||++++|
T Consensus 445 ~~~g~~Gel~v~g~ 458 (637)
T PRK00174 445 LEGGEGGNLVIKDP 458 (637)
T ss_pred CCCCCcEEEEEcCC
Confidence 478899999984
No 41
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.48 E-value=1.1e-13 Score=91.29 Aligned_cols=82 Identities=27% Similarity=0.420 Sum_probs=63.0
Q ss_pred CCCceEEEEEecCCCCHHHHHHh------cCC---eEecccCccccccceeecCCC---------------CcccCceec
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF------LDI---AICEVFGMSECAGAHTVSAPD---------------DFKLDGVGR 57 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~------~~~---~~~~~yG~tE~~~~~~~~~~~---------------~~~~~~~g~ 57 (83)
+++++|.+++||+++++++.++| ++. .+++.||+||++..+...... ..+.+++|+
T Consensus 270 ~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ 349 (525)
T PRK05851 270 DLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGN 349 (525)
T ss_pred CHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecC
Confidence 35689999999999999988876 233 489999999997655432211 123467999
Q ss_pred CcCCcEEEEECCC------CCCcceEEEecCC
Q psy2847 58 TIPGTQTKIVDPD------EEGNGEICLKDLI 83 (83)
Q Consensus 58 p~~~~~~~v~d~~------~g~~Gei~~~~~~ 83 (83)
|+++++++|+|++ .++.|||+++|++
T Consensus 350 p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~ 381 (525)
T PRK05851 350 PIPGMEVRISPGDGAAGVAGREIGEIEIRGAS 381 (525)
T ss_pred CCCCcEEEEECCCCCccCCCCCeEEEEEecCc
Confidence 9999999999865 3578999999874
No 42
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.48 E-value=2.6e-13 Score=88.49 Aligned_cols=81 Identities=27% Similarity=0.326 Sum_probs=65.2
Q ss_pred CCceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCC-C--CcccCceecCcCCcEEEEECCC-----CC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAP-D--DFKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~-~--~~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
++++|.+++||++++....+++ .+.++++.||+||++........ . ..+.+++|+|+++++++++|++ .+
T Consensus 251 ~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g 330 (488)
T PRK09088 251 LRHLTALFTGGAPHAAEDILGWLDDGIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAG 330 (488)
T ss_pred cccceEEEecCCCCCHHHHHHHHHhCCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCC
Confidence 5689999999999999888877 57889999999999865433211 1 1355789999999999999876 36
Q ss_pred CcceEEEecCC
Q psy2847 73 GNGEICLKDLI 83 (83)
Q Consensus 73 ~~Gei~~~~~~ 83 (83)
+.|||++++++
T Consensus 331 ~~Gel~v~~~~ 341 (488)
T PRK09088 331 VPGELLLRGPN 341 (488)
T ss_pred CceEEEEECCc
Confidence 78999999863
No 43
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.48 E-value=3.4e-13 Score=88.38 Aligned_cols=81 Identities=25% Similarity=0.375 Sum_probs=66.7
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
+++++|.+++||+++++++.+++ ++..+++.||+||++.++.....+. .+.+++|+|+++++++++|++ .+
T Consensus 269 ~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g 348 (509)
T PRK12406 269 DVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQG 348 (509)
T ss_pred CCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCC
Confidence 35789999999999999999888 6888999999999987655433222 345789999999999999975 36
Q ss_pred CcceEEEecC
Q psy2847 73 GNGEICLKDL 82 (83)
Q Consensus 73 ~~Gei~~~~~ 82 (83)
+.|||+++++
T Consensus 349 ~~Gel~v~~~ 358 (509)
T PRK12406 349 EIGEIYSRIA 358 (509)
T ss_pred CceEEEEECC
Confidence 7899999885
No 44
>PLN02654 acetate-CoA ligase
Probab=99.48 E-value=2.6e-13 Score=92.08 Aligned_cols=81 Identities=25% Similarity=0.289 Sum_probs=65.7
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cC---CeEecccCccccccceeecCCC--CcccCceecCcCCcEEEEECCC---
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LD---IAICEVFGMSECAGAHTVSAPD--DFKLDGVGRTIPGTQTKIVDPD--- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~---~~~~~~yG~tE~~~~~~~~~~~--~~~~~~~g~p~~~~~~~v~d~~--- 70 (83)
++++||.++++|+++++++.+++ ++ .++.+.||+||+++........ ..+.+++|+|+++++++|+|++
T Consensus 395 ~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~ 474 (666)
T PLN02654 395 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKE 474 (666)
T ss_pred ChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCC
Confidence 46789999999999999999887 55 6799999999998665433221 2466889999999999999976
Q ss_pred --CCCcceEEEecC
Q psy2847 71 --EEGNGEICLKDL 82 (83)
Q Consensus 71 --~g~~Gei~~~~~ 82 (83)
+++.|||++++|
T Consensus 475 ~~~~~~Gel~v~~~ 488 (666)
T PLN02654 475 IEGECSGYLCVKKS 488 (666)
T ss_pred CCCCCceEEEEcCC
Confidence 346799999984
No 45
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.48 E-value=2.9e-13 Score=95.66 Aligned_cols=82 Identities=22% Similarity=0.389 Sum_probs=68.4
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC-CCCcceE
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD-EEGNGEI 77 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~-~g~~Gei 77 (83)
+++++|.+++||+++++++.+++ ++.++++.||+||++..+........+.+++|+|.+++++++.+.+ .++.|||
T Consensus 905 ~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~g~~~~~~~~~~~~~~Gel 984 (1140)
T PRK06814 905 DFRSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPMHNKAGTVGRLLPGIEYRLEPVPGIDEGGRL 984 (1140)
T ss_pred cccceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCCCCCCCcCCccCCCCeEEEeecCCCCCceEE
Confidence 46789999999999999999888 6889999999999987665543333456789999999999998765 3678999
Q ss_pred EEecCC
Q psy2847 78 CLKDLI 83 (83)
Q Consensus 78 ~~~~~~ 83 (83)
+++|++
T Consensus 985 ~v~g~~ 990 (1140)
T PRK06814 985 FVRGPN 990 (1140)
T ss_pred EEeCCC
Confidence 999974
No 46
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.47 E-value=4.3e-13 Score=88.92 Aligned_cols=81 Identities=23% Similarity=0.431 Sum_probs=67.1
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-----CCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD-----EEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~-----~g~ 73 (83)
++++|.+++||+++++.+.++| ++..+++.||+||++..+....... ...+++|+|+++++++++|++ .|+
T Consensus 324 ~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~ 403 (560)
T PRK08974 324 FSSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGE 403 (560)
T ss_pred ccceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEECCCCCCCCCCC
Confidence 5689999999999999999888 6889999999999987765544322 345789999999999999876 367
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||+++++.
T Consensus 404 ~Gel~v~g~~ 413 (560)
T PRK08974 404 PGELWVKGPQ 413 (560)
T ss_pred ceEEEEecCC
Confidence 8999999863
No 47
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.46 E-value=6.1e-13 Score=86.68 Aligned_cols=81 Identities=25% Similarity=0.330 Sum_probs=64.9
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCCC------C-
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDE------E- 72 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~~------g- 72 (83)
++++|.+++||+++++++.+++ ++..+++.||+||++.............+++|+|+++++++++|++. +
T Consensus 240 l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~ 319 (471)
T PRK07787 240 LRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRADGERRPGWVGLPLAGVETRLVDEDGGPVPHDGE 319 (471)
T ss_pred ccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCCCCcccCCcccccCCCcEEEEECCCCCCCCCCCC
Confidence 5689999999999999999988 68889999999999765443322223457899999999999999761 2
Q ss_pred CcceEEEecCC
Q psy2847 73 GNGEICLKDLI 83 (83)
Q Consensus 73 ~~Gei~~~~~~ 83 (83)
+.|||+++|++
T Consensus 320 ~~Gei~v~g~~ 330 (471)
T PRK07787 320 TVGELQVRGPT 330 (471)
T ss_pred CceEEEEECcc
Confidence 37999999863
No 48
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.46 E-value=3.3e-13 Score=89.40 Aligned_cols=82 Identities=24% Similarity=0.367 Sum_probs=66.9
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
+++++|.++.||+++++.+.++| ++.++++.||+||++.++....... ....++|+|+++++++++|++ .|
T Consensus 325 ~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g 404 (557)
T PRK07059 325 DFSKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRDDDGNDLPLG 404 (557)
T ss_pred CchhheEEEeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEECCCCCCCCCC
Confidence 35689999999999999998887 7889999999999987655443322 345789999999999999975 36
Q ss_pred CcceEEEecCC
Q psy2847 73 GNGEICLKDLI 83 (83)
Q Consensus 73 ~~Gei~~~~~~ 83 (83)
+.|||+++++.
T Consensus 405 ~~Gel~v~g~~ 415 (557)
T PRK07059 405 EPGEICIRGPQ 415 (557)
T ss_pred CceEEEEeCCc
Confidence 78999999863
No 49
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.46 E-value=4.5e-13 Score=85.35 Aligned_cols=81 Identities=20% Similarity=0.260 Sum_probs=66.1
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cC-CeEecccCccccccceeecCCCC---c--ccCceecCcCCcEEEEECCC--
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LD-IAICEVFGMSECAGAHTVSAPDD---F--KLDGVGRTIPGTQTKIVDPD-- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~-~~~~~~yG~tE~~~~~~~~~~~~---~--~~~~~g~p~~~~~~~v~d~~-- 70 (83)
.++++|.++++|+++++++.+++ ++ ..+++.||+||++.++....... . +..++|+|+++++++|+|++
T Consensus 232 ~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~ 311 (408)
T TIGR01733 232 ALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDDDLR 311 (408)
T ss_pred cccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECCCCC
Confidence 35789999999999999999998 55 88999999999987665332221 1 16679999999999999976
Q ss_pred ---CCCcceEEEecC
Q psy2847 71 ---EEGNGEICLKDL 82 (83)
Q Consensus 71 ---~g~~Gei~~~~~ 82 (83)
.|+.|||+++++
T Consensus 312 ~~~~g~~Gel~v~~~ 326 (408)
T TIGR01733 312 PVPVGVVGELYIGGP 326 (408)
T ss_pred CCCCCCceEEEecCc
Confidence 467899999986
No 50
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.46 E-value=3.6e-13 Score=87.98 Aligned_cols=81 Identities=27% Similarity=0.376 Sum_probs=65.0
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC------CCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD------EEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~------~g~ 73 (83)
++++|.+++||+++++++.+++ ++.++++.||+||++..............++|.|+++++++++|++ .|+
T Consensus 268 ~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~ 347 (504)
T PRK07514 268 AAHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNTSNPYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGE 347 (504)
T ss_pred ccceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccccCCccccccCcccccCCCCcEEEEEECCCCCCCCCCC
Confidence 4689999999999999999988 6788999999999875543322222345789999999999999943 367
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||+++++.
T Consensus 348 ~Gel~i~~~~ 357 (504)
T PRK07514 348 IGMIEVKGPN 357 (504)
T ss_pred ceEEEEecCC
Confidence 8999999863
No 51
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.46 E-value=5.7e-13 Score=88.05 Aligned_cols=82 Identities=23% Similarity=0.292 Sum_probs=66.1
Q ss_pred CCCceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
+++++|.+++||+++++++.+.+ .+.++++.||+||++.......... ....++|+|++++.++++|++ .+
T Consensus 300 ~~~~lr~i~~gG~~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g 379 (547)
T PRK06087 300 DLSALRFFLCGGTTIPKKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPG 379 (547)
T ss_pred CCCCeEEEEEcCCCCCHHHHHHHHHcCCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCC
Confidence 35789999999999999998887 7889999999999987655433221 234568999999999999976 46
Q ss_pred CcceEEEecCC
Q psy2847 73 GNGEICLKDLI 83 (83)
Q Consensus 73 ~~Gei~~~~~~ 83 (83)
+.|||+++|++
T Consensus 380 ~~Gel~v~g~~ 390 (547)
T PRK06087 380 CEGEEASRGPN 390 (547)
T ss_pred CcceEEEeccc
Confidence 78999999863
No 52
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.46 E-value=4.3e-13 Score=87.92 Aligned_cols=79 Identities=20% Similarity=0.387 Sum_probs=65.7
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC-----CCCcc
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD-----EEGNG 75 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~-----~g~~G 75 (83)
.++|.++++|+++++++.+.| ++.++++.||+||++.+.........+.+++|+|.++++++++|++ .++.|
T Consensus 278 ~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~G 357 (508)
T TIGR02262 278 VRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEPG 357 (508)
T ss_pred ccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCceeecCCccCCCCCCcCCCCCCcEEEEECCCCCCCCCCCee
Confidence 579999999999999999888 7889999999999987655443333456789999999999999965 46789
Q ss_pred eEEEecC
Q psy2847 76 EICLKDL 82 (83)
Q Consensus 76 ei~~~~~ 82 (83)
||+++++
T Consensus 358 el~i~~~ 364 (508)
T TIGR02262 358 ELLISGP 364 (508)
T ss_pred EEEEecC
Confidence 9999986
No 53
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.45 E-value=3.9e-13 Score=91.21 Aligned_cols=80 Identities=28% Similarity=0.523 Sum_probs=63.0
Q ss_pred CceEEEEEecCCCCHHHHHHh--cC-CeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECC-C-------C
Q psy2847 4 DRCRVSLSGAAAISTELKRYF--LD-IAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDP-D-------E 71 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~--~~-~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~-~-------~ 71 (83)
+++|.+++||+++++++.+.+ ++ ..+++.||+||+++..+.....+ ...+++|+|.+++++++.|. + .
T Consensus 383 ~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~ 462 (660)
T PLN02430 383 GRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGE 462 (660)
T ss_pred CeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCC
Confidence 589999999999999987665 44 67999999999987665543332 34689999999999999862 2 2
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
+..|||++|||+
T Consensus 463 ~~~GEi~vrg~~ 474 (660)
T PLN02430 463 PPRGEICVRGKC 474 (660)
T ss_pred CCcceEEecCCC
Confidence 347999999974
No 54
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.45 E-value=5e-13 Score=88.54 Aligned_cols=81 Identities=21% Similarity=0.383 Sum_probs=67.0
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
+++++|.+++||+++++.+.++| ++..+++.||+||++..++....+. ...+++|+|+++++++++|++ .+
T Consensus 327 ~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g 406 (560)
T PRK08751 327 DFSSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKDDAGTVLAIG 406 (560)
T ss_pred chhhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEECCCCCCCCCC
Confidence 35689999999999999998888 6788999999999987665544322 345789999999999999976 46
Q ss_pred CcceEEEecC
Q psy2847 73 GNGEICLKDL 82 (83)
Q Consensus 73 ~~Gei~~~~~ 82 (83)
+.|||+++++
T Consensus 407 ~~Gel~v~~~ 416 (560)
T PRK08751 407 EIGELCIKGP 416 (560)
T ss_pred CceEEEEecC
Confidence 7899999986
No 55
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.45 E-value=4.3e-13 Score=89.10 Aligned_cols=81 Identities=25% Similarity=0.389 Sum_probs=66.7
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-------
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD------- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~------- 70 (83)
.++++|.+++||+++++++.+++ ++..+++.||+||++.++....... .+.+++|+|+++..++++|++
T Consensus 334 ~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~ 413 (573)
T PRK05605 334 DLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMP 413 (573)
T ss_pred CchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCccCC
Confidence 35789999999999999999888 6788999999999987665443322 345789999999999999865
Q ss_pred CCCcceEEEecC
Q psy2847 71 EEGNGEICLKDL 82 (83)
Q Consensus 71 ~g~~Gei~~~~~ 82 (83)
.++.|||+++++
T Consensus 414 ~g~~Gel~v~~~ 425 (573)
T PRK05605 414 DGEEGELLVRGP 425 (573)
T ss_pred CCCeeEEEEecC
Confidence 367899999986
No 56
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.44 E-value=4.4e-13 Score=87.52 Aligned_cols=82 Identities=32% Similarity=0.545 Sum_probs=67.3
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCc------ccCceecCcCCcEEEEECCCC-
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDF------KLDGVGRTIPGTQTKIVDPDE- 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~------~~~~~g~p~~~~~~~v~d~~~- 71 (83)
.++++|.+++||+++++++.+++ ++..+++.||+||++........... ...++|+|++++.++++|++.
T Consensus 279 ~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~ 358 (521)
T PRK06187 279 DFSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGD 358 (521)
T ss_pred CcchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCC
Confidence 45789999999999999999988 58899999999999866554432222 567899999999999999762
Q ss_pred ------CCcceEEEecCC
Q psy2847 72 ------EGNGEICLKDLI 83 (83)
Q Consensus 72 ------g~~Gei~~~~~~ 83 (83)
++.|||+++++.
T Consensus 359 ~~~~~~g~~Gel~v~~~~ 376 (521)
T PRK06187 359 ELPPDGGEVGEIIVRGPW 376 (521)
T ss_pred CCCCCCCCeeEEEEECcc
Confidence 788999999863
No 57
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.44 E-value=5e-13 Score=87.21 Aligned_cols=78 Identities=26% Similarity=0.381 Sum_probs=62.8
Q ss_pred CCceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCCCCCcceEE
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPDEEGNGEIC 78 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~~g~~Gei~ 78 (83)
++++|.+++||+++++++.+++ ++..+++.||+||++..+....... ....++|+|.++++++++ .++.|||+
T Consensus 229 l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~---~g~~Gel~ 305 (452)
T PRK07445 229 LAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP---ANQTGNIT 305 (452)
T ss_pred hhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc---CCCcceEE
Confidence 5789999999999999999888 6888999999999875544332222 245679999999999998 35689999
Q ss_pred EecCC
Q psy2847 79 LKDLI 83 (83)
Q Consensus 79 ~~~~~ 83 (83)
+++|+
T Consensus 306 v~g~~ 310 (452)
T PRK07445 306 IQAQS 310 (452)
T ss_pred EeCCc
Confidence 99874
No 58
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.43 E-value=1.2e-12 Score=85.49 Aligned_cols=82 Identities=21% Similarity=0.374 Sum_probs=65.9
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCC--CcccCceecCcCCcEEEEECCC-----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPD--DFKLDGVGRTIPGTQTKIVDPD----- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~--~~~~~~~g~p~~~~~~~v~d~~----- 70 (83)
+++++|.+++||+++++++.+++ + +..+++.||+||++..+...... ....+++|+|++++++++.|++
T Consensus 262 ~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~ 341 (497)
T PRK06145 262 DLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLP 341 (497)
T ss_pred ccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCC
Confidence 35689999999999999998888 4 57799999999998765443322 1345689999999999999876
Q ss_pred CCCcceEEEecCC
Q psy2847 71 EEGNGEICLKDLI 83 (83)
Q Consensus 71 ~g~~Gei~~~~~~ 83 (83)
.++.|||+++|++
T Consensus 342 ~~~~Gel~v~g~~ 354 (497)
T PRK06145 342 PNMKGEICMRGPK 354 (497)
T ss_pred CCCceEEEEECcc
Confidence 3678999999863
No 59
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.42 E-value=5.3e-13 Score=89.76 Aligned_cols=82 Identities=26% Similarity=0.324 Sum_probs=63.0
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c---C---CeEecccCccccccceeecCCCC-----------------------
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L---D---IAICEVFGMSECAGAHTVSAPDD----------------------- 49 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~---~---~~~~~~yG~tE~~~~~~~~~~~~----------------------- 49 (83)
+++++|.+++||+++++++.++| + + ..+++.||+||++..++......
T Consensus 304 ~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 383 (631)
T PRK07769 304 DLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPAD 383 (631)
T ss_pred chhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCC
Confidence 46789999999999999999888 4 2 24899999999876554432111
Q ss_pred ----cccCceecCcCCcEEEEECCC------CCCcceEEEecCC
Q psy2847 50 ----FKLDGVGRTIPGTQTKIVDPD------EEGNGEICLKDLI 83 (83)
Q Consensus 50 ----~~~~~~g~p~~~~~~~v~d~~------~g~~Gei~~~~~~ 83 (83)
....++|+|.++.+++++|++ .|+.|||+++||+
T Consensus 384 ~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~ 427 (631)
T PRK07769 384 APNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNN 427 (631)
T ss_pred CCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCC
Confidence 012468999999999999854 4788999999974
No 60
>PRK08315 AMP-binding domain protein; Validated
Probab=99.42 E-value=8e-13 Score=87.43 Aligned_cols=81 Identities=26% Similarity=0.530 Sum_probs=65.5
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCC-eEecccCccccccceeecCCCC---cccCceecCcCCcEEEEECCC----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDI-AICEVFGMSECAGAHTVSAPDD---FKLDGVGRTIPGTQTKIVDPD---- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~-~~~~~yG~tE~~~~~~~~~~~~---~~~~~~g~p~~~~~~~v~d~~---- 70 (83)
+++++|.++++|+++++++.+++ ++. .+++.||+||++.+++...... .+..++|+|+++++++++|++
T Consensus 313 ~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~ 392 (559)
T PRK08315 313 DLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGET 392 (559)
T ss_pred CchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCc
Confidence 35789999999999999998887 544 4999999999987665443322 345789999999999999976
Q ss_pred --CCCcceEEEecC
Q psy2847 71 --EEGNGEICLKDL 82 (83)
Q Consensus 71 --~g~~Gei~~~~~ 82 (83)
.|+.|||+++++
T Consensus 393 ~~~g~~GEl~v~g~ 406 (559)
T PRK08315 393 VPRGEQGELCTRGY 406 (559)
T ss_pred CCCCCceEEEEECc
Confidence 477899999986
No 61
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.42 E-value=1e-12 Score=85.53 Aligned_cols=80 Identities=24% Similarity=0.297 Sum_probs=65.0
Q ss_pred CceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCC--CcccCceecCcCCcEEEEECCC----CCCcc
Q psy2847 4 DRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPD--DFKLDGVGRTIPGTQTKIVDPD----EEGNG 75 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~--~~~~~~~g~p~~~~~~~v~d~~----~g~~G 75 (83)
.++|.++++|+++++.+++++ ++.++++.||+||++..+...... ....+++|+|++++++++.|++ .++.|
T Consensus 254 ~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~~~~~~~g~~G 333 (483)
T PRK03640 254 SSFRCMLLGGGPAPKPLLEQCKEKGIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKDGVVVPPFEEG 333 (483)
T ss_pred CcceEEEEcCCCCCHHHHHHHHHhCCCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecCCCcCCCCCce
Confidence 589999999999999999888 788999999999987543332222 2456889999999999999863 46789
Q ss_pred eEEEecCC
Q psy2847 76 EICLKDLI 83 (83)
Q Consensus 76 ei~~~~~~ 83 (83)
||+++||+
T Consensus 334 el~v~g~~ 341 (483)
T PRK03640 334 EIVVKGPN 341 (483)
T ss_pred EEEEECcc
Confidence 99999873
No 62
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.42 E-value=1e-12 Score=88.78 Aligned_cols=81 Identities=15% Similarity=0.120 Sum_probs=65.1
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c--CCeEecccCccccccceeecCC-CCcccCceecCcCCcEEEEECCC----C
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L--DIAICEVFGMSECAGAHTVSAP-DDFKLDGVGRTIPGTQTKIVDPD----E 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~--~~~~~~~yG~tE~~~~~~~~~~-~~~~~~~~g~p~~~~~~~v~d~~----~ 71 (83)
++++||.++++|+++++++.+++ + +..+.+.||+||+++....... ...+.+++|.|.++++++|+|++ .
T Consensus 381 ~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd~~g~~~~ 460 (655)
T PRK03584 381 DLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWDEDGRPVV 460 (655)
T ss_pred ChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEECCCCCCCC
Confidence 46799999999999999999887 4 4789999999998654332211 12456789999999999999987 3
Q ss_pred CCcceEEEecC
Q psy2847 72 EGNGEICLKDL 82 (83)
Q Consensus 72 g~~Gei~~~~~ 82 (83)
++.|||++++|
T Consensus 461 g~~GeL~v~gp 471 (655)
T PRK03584 461 GEVGELVCTKP 471 (655)
T ss_pred CCceEEEEccC
Confidence 78899999986
No 63
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.42 E-value=1.2e-12 Score=86.54 Aligned_cols=81 Identities=27% Similarity=0.482 Sum_probs=66.0
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cC-CeEecccCccccccceeecCCCC---cccCceecCcCCcEEEEECCC----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LD-IAICEVFGMSECAGAHTVSAPDD---FKLDGVGRTIPGTQTKIVDPD---- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~-~~~~~~yG~tE~~~~~~~~~~~~---~~~~~~g~p~~~~~~~v~d~~---- 70 (83)
+++++|.+++||+++++++.+++ ++ ..+.+.||+||++.++....... .+..++|+|++++.++++|++
T Consensus 315 ~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~ 394 (558)
T PRK12583 315 DLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDGATV 394 (558)
T ss_pred CchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCCCCC
Confidence 35789999999999999999887 44 56999999999987765543221 345789999999999999976
Q ss_pred -CCCcceEEEecC
Q psy2847 71 -EEGNGEICLKDL 82 (83)
Q Consensus 71 -~g~~Gei~~~~~ 82 (83)
.++.|||+++|+
T Consensus 395 ~~g~~Gel~v~g~ 407 (558)
T PRK12583 395 PRGEIGELCTRGY 407 (558)
T ss_pred CCCCeeEEEEEeC
Confidence 467899999886
No 64
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.42 E-value=1.3e-12 Score=85.53 Aligned_cols=81 Identities=16% Similarity=0.329 Sum_probs=65.8
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCC-CcccCceecCcCCcEEEEECCC-----C
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPD-DFKLDGVGRTIPGTQTKIVDPD-----E 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~g~p~~~~~~~v~d~~-----~ 71 (83)
+++++|.++++|+++++++.+++ + +..+++.||+||++......... ..+.+++|+|+++++++++|++ .
T Consensus 272 ~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~ 351 (515)
T TIGR03098 272 AAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAP 351 (515)
T ss_pred CccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCC
Confidence 34689999999999999999988 4 67899999999987654433221 2456789999999999999876 3
Q ss_pred CCcceEEEecC
Q psy2847 72 EGNGEICLKDL 82 (83)
Q Consensus 72 g~~Gei~~~~~ 82 (83)
++.|||+++|+
T Consensus 352 ~~~Gel~v~g~ 362 (515)
T TIGR03098 352 GEEGELVHRGA 362 (515)
T ss_pred CCceEEEEcCc
Confidence 67899999986
No 65
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.42 E-value=7.8e-13 Score=87.03 Aligned_cols=82 Identities=23% Similarity=0.366 Sum_probs=65.7
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC--------CcccCceecCcCCcEEEEECCC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD--------DFKLDGVGRTIPGTQTKIVDPD 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~--------~~~~~~~g~p~~~~~~~v~d~~ 70 (83)
+++++|.+++||++++++..+++ ++..+++.||+||+++.+...... ....+++|+|.++++++++|++
T Consensus 278 ~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~ 357 (528)
T PRK07470 278 DHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDE 357 (528)
T ss_pred CCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCC
Confidence 45789999999999999988887 677899999999998765543211 1245688999999999999976
Q ss_pred -----CCCcceEEEecCC
Q psy2847 71 -----EEGNGEICLKDLI 83 (83)
Q Consensus 71 -----~g~~Gei~~~~~~ 83 (83)
.++.|||+++++.
T Consensus 358 ~~~~~~g~~Gel~i~~~~ 375 (528)
T PRK07470 358 GRELPPGETGEICVIGPA 375 (528)
T ss_pred CCCCCCCCceEEEEeCCc
Confidence 4678999999863
No 66
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.41 E-value=2.1e-12 Score=84.36 Aligned_cols=80 Identities=19% Similarity=0.255 Sum_probs=64.4
Q ss_pred CceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCC-CcccCceecCcCCcEEEEECCC-----CCC
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPD-DFKLDGVGRTIPGTQTKIVDPD-----EEG 73 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~g~p~~~~~~~v~d~~-----~g~ 73 (83)
.+.+.++++|+++++++.+++ + +..+++.||+||++..+...... ..+.+++|+|+++++++++|++ .|+
T Consensus 253 ~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~ 332 (487)
T PRK07638 253 ENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGE 332 (487)
T ss_pred CceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCC
Confidence 345667889999999988887 4 67899999999998766554322 2456789999999999999976 478
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||+++++.
T Consensus 333 ~Gel~v~~~~ 342 (487)
T PRK07638 333 IGTVYVKSPQ 342 (487)
T ss_pred CeEEEEeccc
Confidence 8999999863
No 67
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.41 E-value=1.3e-12 Score=85.50 Aligned_cols=80 Identities=24% Similarity=0.331 Sum_probs=65.2
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC-CcccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD-DFKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
+++++|.++++|+++++++.+++ ++..+++.||+||++.++...... ....+++|+|+ +..++++|++ .|
T Consensus 260 ~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g 338 (502)
T PRK08276 260 DVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILDEDGNELPPG 338 (502)
T ss_pred CcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEECCCCCCCcCC
Confidence 46789999999999999999988 677899999999998755544332 24557899999 8899999865 36
Q ss_pred CcceEEEecC
Q psy2847 73 GNGEICLKDL 82 (83)
Q Consensus 73 ~~Gei~~~~~ 82 (83)
+.|||+++++
T Consensus 339 ~~Gel~v~~~ 348 (502)
T PRK08276 339 EIGTVYFEMD 348 (502)
T ss_pred CceEEEEECC
Confidence 7899999975
No 68
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.41 E-value=1.9e-12 Score=84.71 Aligned_cols=81 Identities=26% Similarity=0.420 Sum_probs=66.2
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCC-----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD----- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~----- 70 (83)
+++++|.+++||++++.++.+++ + +..+++.||+||++.+........ ...+++|+|+++++++++|++
T Consensus 284 ~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~ 363 (523)
T PRK08316 284 DLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVA 363 (523)
T ss_pred CcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCC
Confidence 35689999999999999998888 4 678999999999987655433221 345789999999999999975
Q ss_pred CCCcceEEEecC
Q psy2847 71 EEGNGEICLKDL 82 (83)
Q Consensus 71 ~g~~Gei~~~~~ 82 (83)
.++.|||+++++
T Consensus 364 ~g~~Gei~v~~~ 375 (523)
T PRK08316 364 PGEVGEIVHRSP 375 (523)
T ss_pred CCCcceEEEECC
Confidence 467899999986
No 69
>PRK12316 peptide synthase; Provisional
Probab=99.41 E-value=1.1e-12 Score=101.96 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=68.1
Q ss_pred CCceEEEEEecCCCCHHHHHHh-cCCeEecccCccccccceeecCCC--CcccCceecCcCCcEEEEECCC-----CCCc
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF-LDIAICEVFGMSECAGAHTVSAPD--DFKLDGVGRTIPGTQTKIVDPD-----EEGN 74 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~-~~~~~~~~yG~tE~~~~~~~~~~~--~~~~~~~g~p~~~~~~~v~d~~-----~g~~ 74 (83)
++++|.+++||+++++++.++| .+.+++|.||+||++..++..... .....++|+|++++++.|+|++ .|..
T Consensus 3310 ~~~lr~~~~gGe~l~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~ 3389 (5163)
T PRK12316 3310 CTSLKRIVCGGEALPADLQQQVFAGLPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYILDGSLEPVPVGAL 3389 (5163)
T ss_pred CCcceEEEEccccCCHHHHHHHHhCCcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEEECCCCCCCCCCCC
Confidence 4689999999999999999999 788899999999998766544332 2445789999999999999976 4789
Q ss_pred ceEEEecCC
Q psy2847 75 GEICLKDLI 83 (83)
Q Consensus 75 Gei~~~~~~ 83 (83)
|||+++|+.
T Consensus 3390 GEl~i~G~~ 3398 (5163)
T PRK12316 3390 GELYLGGEG 3398 (5163)
T ss_pred ceEEecccc
Confidence 999999873
No 70
>PRK12467 peptide synthase; Provisional
Probab=99.40 E-value=1.4e-12 Score=100.21 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=66.2
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCCC-----cccCceecCcCCcEEEEECCC--
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPDD-----FKLDGVGRTIPGTQTKIVDPD-- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~~-----~~~~~~g~p~~~~~~~v~d~~-- 70 (83)
++++||.+++||+++++++.++| + +..++|.||+||++..+....... ....++|+|+++++++|+|++
T Consensus 3349 ~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~ 3428 (3956)
T PRK12467 3349 DCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLN 3428 (3956)
T ss_pred CCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCC
Confidence 35789999999999999999988 3 578999999999986654332211 223679999999999999976
Q ss_pred ---CCCcceEEEecCC
Q psy2847 71 ---EEGNGEICLKDLI 83 (83)
Q Consensus 71 ---~g~~Gei~~~~~~ 83 (83)
.|+.|||+++|+.
T Consensus 3429 ~vp~G~~GEL~i~G~~ 3444 (3956)
T PRK12467 3429 PVPVGVAGELYIGGVG 3444 (3956)
T ss_pred CCCCCCCceEEEcchh
Confidence 4789999999973
No 71
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.40 E-value=1.6e-12 Score=85.48 Aligned_cols=81 Identities=23% Similarity=0.356 Sum_probs=64.9
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC------cccCceecCcCCcEEEEECCC--
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD------FKLDGVGRTIPGTQTKIVDPD-- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~------~~~~~~g~p~~~~~~~v~d~~-- 70 (83)
+++++|.+++||++++++..+++ ++..+++.||+||++..++...... ....++|+|+++++++++|++
T Consensus 279 ~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~ 358 (524)
T PRK06188 279 DLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGR 358 (524)
T ss_pred CCcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCC
Confidence 35789999999999999988777 6777999999999976555432211 345678999999999999976
Q ss_pred ---CCCcceEEEecC
Q psy2847 71 ---EEGNGEICLKDL 82 (83)
Q Consensus 71 ---~g~~Gei~~~~~ 82 (83)
.|+.|||+++++
T Consensus 359 ~~~~g~~Gel~v~~~ 373 (524)
T PRK06188 359 EVAQGEVGEICVRGP 373 (524)
T ss_pred CCCCCCeeEEEEECc
Confidence 467899999986
No 72
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.40 E-value=1.4e-12 Score=92.94 Aligned_cols=80 Identities=16% Similarity=0.195 Sum_probs=65.3
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC-------CcccCceecCcCCcEEEEECCC--
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD-------DFKLDGVGRTIPGTQTKIVDPD-- 70 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~-------~~~~~~~g~p~~~~~~~v~d~~-- 70 (83)
++++|.+++||+++++++.++| ++..+++.||+||++..++..... .....++|+|+++++++|+|++
T Consensus 716 ~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~ 795 (1296)
T PRK10252 716 CASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMR 795 (1296)
T ss_pred CCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCC
Confidence 4689999999999999999988 678999999999998655443221 1234579999999999999976
Q ss_pred ---CCCcceEEEecC
Q psy2847 71 ---EEGNGEICLKDL 82 (83)
Q Consensus 71 ---~g~~Gei~~~~~ 82 (83)
.|+.|||+++|+
T Consensus 796 ~~~~g~~Gel~i~g~ 810 (1296)
T PRK10252 796 PVPPGVAGDLYLTGI 810 (1296)
T ss_pred CCCCCCceEEEeccc
Confidence 478999999986
No 73
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.40 E-value=2.4e-12 Score=85.27 Aligned_cols=82 Identities=21% Similarity=0.340 Sum_probs=63.3
Q ss_pred CCCceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCC-----cccCceecCcCCcEEEEECCCC---
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDD-----FKLDGVGRTIPGTQTKIVDPDE--- 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~-----~~~~~~g~p~~~~~~~v~d~~~--- 71 (83)
+++++|.+++||++++....+++ ++.++++.||+||++.......... .+.+++|+|+++++++++|++.
T Consensus 284 ~~~~lr~~~~gG~~~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~ 363 (540)
T PRK05857 284 TVPSLRLVGYGGSRAIAADVRFIEATGVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGP 363 (540)
T ss_pred cCccceEEEEcCccCCchhHHHHHHhCCeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCc
Confidence 46789999999999988776544 7889999999999975433222211 2357899999999999998652
Q ss_pred --------CCcceEEEecCC
Q psy2847 72 --------EGNGEICLKDLI 83 (83)
Q Consensus 72 --------g~~Gei~~~~~~ 83 (83)
++.|||+++++.
T Consensus 364 ~~~~~~~~~~~Gel~v~g~~ 383 (540)
T PRK05857 364 TAPGAGPSASFGTLWIKSPA 383 (540)
T ss_pred cccccCCCCCcceEEEeCcc
Confidence 457999999973
No 74
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.39 E-value=1.5e-12 Score=85.19 Aligned_cols=80 Identities=23% Similarity=0.349 Sum_probs=64.4
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCC-----CCC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPD-----EEG 73 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~-----~g~ 73 (83)
++++|.++++|+++++++.+.+ ++..+++.||+||+++++....... ...+++|+|+++ .++++|++ .|+
T Consensus 269 ~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~ 347 (501)
T PRK13390 269 VSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGR 347 (501)
T ss_pred hhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCC
Confidence 5689999999999999998887 6788999999999987554433221 345789999999 68999865 478
Q ss_pred cceEEEecCC
Q psy2847 74 NGEICLKDLI 83 (83)
Q Consensus 74 ~Gei~~~~~~ 83 (83)
.|||++++++
T Consensus 348 ~Gel~v~~~~ 357 (501)
T PRK13390 348 IGTVYFERDR 357 (501)
T ss_pred ceEEEEecCC
Confidence 8999999863
No 75
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.39 E-value=2.7e-12 Score=85.03 Aligned_cols=78 Identities=26% Similarity=0.545 Sum_probs=62.0
Q ss_pred ceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecC-CC----CcccCceecCcCCcEEEEECCC-----
Q psy2847 5 RCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSA-PD----DFKLDGVGRTIPGTQTKIVDPD----- 70 (83)
Q Consensus 5 ~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~-~~----~~~~~~~g~p~~~~~~~v~d~~----- 70 (83)
++|.++++|+++++++.+++ + +.++++.||+||++.+..... .. ..+..++|+|+++++++++|++
T Consensus 304 ~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~ 383 (546)
T PLN02330 304 KLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSL 383 (546)
T ss_pred eeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccC
Confidence 47899999999999999988 5 789999999999975543221 11 1234679999999999999854
Q ss_pred -CCCcceEEEecC
Q psy2847 71 -EEGNGEICLKDL 82 (83)
Q Consensus 71 -~g~~Gei~~~~~ 82 (83)
.|+.|||+++|+
T Consensus 384 p~g~~Gel~v~g~ 396 (546)
T PLN02330 384 PKNTPGELCVRSQ 396 (546)
T ss_pred CCCCceEEEEecc
Confidence 367899999986
No 76
>PRK12316 peptide synthase; Provisional
Probab=99.39 E-value=1.7e-12 Score=101.05 Aligned_cols=81 Identities=17% Similarity=0.155 Sum_probs=65.7
Q ss_pred CCceEEEEEecCCCCHHHHHHh----cCCeEecccCccccccceeecCC--CCcccCceecCcCCcEEEEECCC-----C
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF----LDIAICEVFGMSECAGAHTVSAP--DDFKLDGVGRTIPGTQTKIVDPD-----E 71 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~----~~~~~~~~yG~tE~~~~~~~~~~--~~~~~~~~g~p~~~~~~~v~d~~-----~ 71 (83)
++++|.+++||+++++++.++| .+.+++|.||+||++..+..... ......++|+|+++++++|+|++ .
T Consensus 769 ~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~ 848 (5163)
T PRK12316 769 CTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPV 848 (5163)
T ss_pred CCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCC
Confidence 5689999999999999999888 46789999999999854433222 12345679999999999999976 4
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
|+.|||+++|+.
T Consensus 849 G~~GEl~i~G~~ 860 (5163)
T PRK12316 849 GVLGELYLAGRG 860 (5163)
T ss_pred CCceEEEecccc
Confidence 789999999873
No 77
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.38 E-value=2.8e-12 Score=84.92 Aligned_cols=82 Identities=23% Similarity=0.340 Sum_probs=64.5
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-----------cccCceecCcCCcEEEEE
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-----------FKLDGVGRTIPGTQTKIV 67 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-----------~~~~~~g~p~~~~~~~v~ 67 (83)
+++++|.++++|+++++++.+++ ++..+++.||+||++..+....... ....++|+|+++++++++
T Consensus 291 ~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~ 370 (539)
T PRK07008 291 RFSTLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIV 370 (539)
T ss_pred CcccceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEE
Confidence 45789999999999999999988 7889999999999986544332110 113578999999999999
Q ss_pred CCCC-------CCcceEEEecCC
Q psy2847 68 DPDE-------EGNGEICLKDLI 83 (83)
Q Consensus 68 d~~~-------g~~Gei~~~~~~ 83 (83)
|++. ++.|||+++|+.
T Consensus 371 d~~~~~~~~~~~~~Gei~v~g~~ 393 (539)
T PRK07008 371 GDDGRELPWDGKAFGDLQVRGPW 393 (539)
T ss_pred CCCCCccCCCCCcceEEEEeCCc
Confidence 9762 246999999863
No 78
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.38 E-value=1.3e-12 Score=87.63 Aligned_cols=81 Identities=25% Similarity=0.332 Sum_probs=61.6
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c---CC---eEecccCccccccceeecCCCC-----------------------
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L---DI---AICEVFGMSECAGAHTVSAPDD----------------------- 49 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~---~~---~~~~~yG~tE~~~~~~~~~~~~----------------------- 49 (83)
+++++| +++||+++++++.+++ + +. .+++.||+||++..++....+.
T Consensus 316 ~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 394 (612)
T PRK12476 316 DLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAAD 394 (612)
T ss_pred chhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCC
Confidence 467889 9999999999999887 3 33 4899999999875543321110
Q ss_pred ----cccCceecCcCCcEEEEECCC------CCCcceEEEecCC
Q psy2847 50 ----FKLDGVGRTIPGTQTKIVDPD------EEGNGEICLKDLI 83 (83)
Q Consensus 50 ----~~~~~~g~p~~~~~~~v~d~~------~g~~Gei~~~~~~ 83 (83)
.+.+++|+|+++++++|+|++ .++.|||+++|++
T Consensus 395 ~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~ 438 (612)
T PRK12476 395 APNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDN 438 (612)
T ss_pred CCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCc
Confidence 012478999999999999966 3678999999974
No 79
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.37 E-value=2.6e-12 Score=87.01 Aligned_cols=81 Identities=14% Similarity=0.210 Sum_probs=63.2
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c--CCeEecccCccccccceeec-CCCCcccCceecCcCCcEEEEECCC----C
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L--DIAICEVFGMSECAGAHTVS-APDDFKLDGVGRTIPGTQTKIVDPD----E 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~--~~~~~~~yG~tE~~~~~~~~-~~~~~~~~~~g~p~~~~~~~v~d~~----~ 71 (83)
++++||.+++||+++++++.+++ + +..+.+.||+||++...... +......+++|.|.++++++++|++ .
T Consensus 382 ~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd~~g~~~~ 461 (652)
T TIGR01217 382 DLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAVQSWDPEGKPVT 461 (652)
T ss_pred ChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCceEEECCCCCCCC
Confidence 46799999999999999998887 3 35678999999975333222 2112345788999999999999987 3
Q ss_pred CCcceEEEecC
Q psy2847 72 EGNGEICLKDL 82 (83)
Q Consensus 72 g~~Gei~~~~~ 82 (83)
|+.|||++++|
T Consensus 462 g~~GEl~v~gp 472 (652)
T TIGR01217 462 GEVGELVCTNP 472 (652)
T ss_pred CCccEEEEecC
Confidence 68899999986
No 80
>PLN02246 4-coumarate--CoA ligase
Probab=99.37 E-value=4.8e-12 Score=83.63 Aligned_cols=81 Identities=31% Similarity=0.521 Sum_probs=64.6
Q ss_pred CCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCC-----CCcccCceecCcCCcEEEEECCC---
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAP-----DDFKLDGVGRTIPGTQTKIVDPD--- 70 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~-----~~~~~~~~g~p~~~~~~~v~d~~--- 70 (83)
++++|.+++||+++++++.+++ + +..+++.||+||++.+++.... ...+.+++|+|+++++++++|++
T Consensus 297 ~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~ 376 (537)
T PLN02246 297 LSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGA 376 (537)
T ss_pred ccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCC
Confidence 5689999999999999999888 4 6779999999999866543211 11345789999999999999854
Q ss_pred ---CCCcceEEEecCC
Q psy2847 71 ---EEGNGEICLKDLI 83 (83)
Q Consensus 71 ---~g~~Gei~~~~~~ 83 (83)
.|+.|||+++|++
T Consensus 377 ~~~~g~~Gel~v~g~~ 392 (537)
T PLN02246 377 SLPRNQPGEICIRGPQ 392 (537)
T ss_pred cCCCCCceEEEEECCc
Confidence 4678999999863
No 81
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.37 E-value=4.8e-12 Score=83.11 Aligned_cols=80 Identities=23% Similarity=0.295 Sum_probs=64.5
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC-CcccCceecCcCCcEEEEECCC-----CC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD-DFKLDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
+++++|.+++||+++++++.+++ ++..+++.||+||++.++...... ....+++|+|.++ .++++|++ .|
T Consensus 273 ~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g 351 (511)
T PRK13391 273 DLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPG 351 (511)
T ss_pred CccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCC
Confidence 35789999999999999999888 677899999999998765543322 2456789999998 68898865 36
Q ss_pred CcceEEEecC
Q psy2847 73 GNGEICLKDL 82 (83)
Q Consensus 73 ~~Gei~~~~~ 82 (83)
+.|||+++++
T Consensus 352 ~~Gel~~~g~ 361 (511)
T PRK13391 352 EPGTIWFEGG 361 (511)
T ss_pred CceEEEEecC
Confidence 7899999985
No 82
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.37 E-value=5.3e-12 Score=83.53 Aligned_cols=81 Identities=23% Similarity=0.321 Sum_probs=63.7
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC-CcccCceecCc-CCcEEEEECCC-----CC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD-DFKLDGVGRTI-PGTQTKIVDPD-----EE 72 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~g~p~-~~~~~~v~d~~-----~g 72 (83)
++++|.+++||+++++++.+++ ++.++++.||+||+.......... .....++|+|+ ++..++++|++ .|
T Consensus 299 ~~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g 378 (536)
T PRK10946 299 LASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQG 378 (536)
T ss_pred ccceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCC
Confidence 4689999999999999999988 788999999999975333211111 13457899998 78999999875 47
Q ss_pred CcceEEEecCC
Q psy2847 73 GNGEICLKDLI 83 (83)
Q Consensus 73 ~~Gei~~~~~~ 83 (83)
+.|||+++|+.
T Consensus 379 ~~Gel~v~g~~ 389 (536)
T PRK10946 379 EVGRLMTRGPY 389 (536)
T ss_pred CccEEEEecCc
Confidence 88999999863
No 83
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.37 E-value=3.3e-12 Score=84.42 Aligned_cols=81 Identities=22% Similarity=0.368 Sum_probs=64.2
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEEC--CC-----C
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVD--PD-----E 71 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d--~~-----~ 71 (83)
++++|.+++||+++++++.+++ ++.++++.||+||++..+....... ...+++|+|++++++++.+ ++ .
T Consensus 311 ~~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~ 390 (541)
T TIGR03205 311 LSSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPP 390 (541)
T ss_pred ccccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCccCCC
Confidence 5689999999999999998887 6888999999999987665443322 3456899999999988764 32 3
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
++.|||++++++
T Consensus 391 g~~Gel~v~~~~ 402 (541)
T TIGR03205 391 GEVGELRIRGPN 402 (541)
T ss_pred CCeeEEEEecCC
Confidence 678999999863
No 84
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.36 E-value=2.3e-12 Score=85.54 Aligned_cols=80 Identities=21% Similarity=0.338 Sum_probs=64.3
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCC-CCcccCceecCcCCcEEEEECCC------CC
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAP-DDFKLDGVGRTIPGTQTKIVDPD------EE 72 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~-~~~~~~~~g~p~~~~~~~v~d~~------~g 72 (83)
++++|.+++||+++++++.+++ ++..+++.||+||++..+..... .....+++|+|+++..++++|++ .|
T Consensus 322 ~~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g 401 (563)
T PRK06710 322 ISSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPG 401 (563)
T ss_pred hhhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCccCCCC
Confidence 5689999999999999999888 67889999999999865433221 11345689999999999999854 36
Q ss_pred CcceEEEecC
Q psy2847 73 GNGEICLKDL 82 (83)
Q Consensus 73 ~~Gei~~~~~ 82 (83)
+.|||+++++
T Consensus 402 ~~Gel~v~g~ 411 (563)
T PRK06710 402 EIGEIVVKGP 411 (563)
T ss_pred CceEEEEecC
Confidence 7899999986
No 85
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.36 E-value=5.9e-12 Score=83.03 Aligned_cols=82 Identities=22% Similarity=0.336 Sum_probs=63.3
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecC-CCCcccCceecCc-CCcEEEEECCC-----C
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSA-PDDFKLDGVGRTI-PGTQTKIVDPD-----E 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~-~~~~~~~~~g~p~-~~~~~~v~d~~-----~ 71 (83)
+++++|.+++||+++++++.+++ ++..+++.||+||+........ ......+++|+|+ ++..++++|++ .
T Consensus 297 ~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~ 376 (527)
T TIGR02275 297 DLSSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAP 376 (527)
T ss_pred CccceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCC
Confidence 35689999999999999999988 7889999999999653322111 1113346789998 47899999876 4
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
|+.|||+++|++
T Consensus 377 g~~Gei~v~g~~ 388 (527)
T TIGR02275 377 GETGMLLTRGPY 388 (527)
T ss_pred CCceEEEecCCc
Confidence 788999999863
No 86
>PRK05691 peptide synthase; Validated
Probab=99.35 E-value=3.7e-12 Score=98.32 Aligned_cols=81 Identities=22% Similarity=0.333 Sum_probs=66.2
Q ss_pred CCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCC--CCcccCceecCcCCcEEEEECCC-----C
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAP--DDFKLDGVGRTIPGTQTKIVDPD-----E 71 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~--~~~~~~~~g~p~~~~~~~v~d~~-----~ 71 (83)
+++||.+++||+++++++.++| + +..++|.||+||++..+..... ......++|+|+++++++|+|++ .
T Consensus 1387 ~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~ 1466 (4334)
T PRK05691 1387 CTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLDAELNLLPP 1466 (4334)
T ss_pred CCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEECCCCCCCCC
Confidence 5789999999999999999988 3 6789999999999865543221 22345689999999999999976 4
Q ss_pred CCcceEEEecCC
Q psy2847 72 EGNGEICLKDLI 83 (83)
Q Consensus 72 g~~Gei~~~~~~ 83 (83)
|+.|||+++|+.
T Consensus 1467 G~~GEL~i~G~~ 1478 (4334)
T PRK05691 1467 GVAGELCIGGAG 1478 (4334)
T ss_pred CCceEEEecCcc
Confidence 788999999873
No 87
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.34 E-value=8e-12 Score=82.72 Aligned_cols=78 Identities=31% Similarity=0.413 Sum_probs=64.1
Q ss_pred ceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCC-----CCC
Q psy2847 5 RCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD-----EEG 73 (83)
Q Consensus 5 ~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~-----~g~ 73 (83)
++|.+++||+++++++++++ + +..+++.||+||++.+.+....+. .+.+++|+|++++.++++|++ .++
T Consensus 291 ~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~ 370 (542)
T PRK07786 291 ALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGE 370 (542)
T ss_pred ceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCC
Confidence 68999999999999998888 4 788999999999987655433221 345789999999999999976 367
Q ss_pred cceEEEecC
Q psy2847 74 NGEICLKDL 82 (83)
Q Consensus 74 ~Gei~~~~~ 82 (83)
.|||+++|+
T Consensus 371 ~Gel~v~g~ 379 (542)
T PRK07786 371 VGEIVYRAP 379 (542)
T ss_pred ceEEEEECh
Confidence 899999986
No 88
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.34 E-value=7.6e-12 Score=81.75 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=64.1
Q ss_pred CCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCC-----CcccCceecCcCCcEEEEECCC---
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPD-----DFKLDGVGRTIPGTQTKIVDPD--- 70 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~-----~~~~~~~g~p~~~~~~~v~d~~--- 70 (83)
++++|.++++|+++++++.+++ + +..+++.||+||++..+...... .....++|.|.++++++++|++
T Consensus 257 ~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~ 336 (502)
T TIGR01734 257 YPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEP 336 (502)
T ss_pred CCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCC
Confidence 4689999999999999999887 3 78899999999987544322111 1234579999999999999976
Q ss_pred --CCCcceEEEecCC
Q psy2847 71 --EEGNGEICLKDLI 83 (83)
Q Consensus 71 --~g~~Gei~~~~~~ 83 (83)
.|+.|||+++|++
T Consensus 337 ~~~g~~Gel~v~g~~ 351 (502)
T TIGR01734 337 LPEGEKGEIVIVGPS 351 (502)
T ss_pred CCCCCeeEEEEcccc
Confidence 4678999999863
No 89
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.33 E-value=6.3e-12 Score=90.40 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=64.0
Q ss_pred CCceEEEEEecCCCCHHHHHHh----cCCeEecccCccccccceeecCCCC-----------cccCceecCcCCcEEEEE
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF----LDIAICEVFGMSECAGAHTVSAPDD-----------FKLDGVGRTIPGTQTKIV 67 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~----~~~~~~~~yG~tE~~~~~~~~~~~~-----------~~~~~~g~p~~~~~~~v~ 67 (83)
++++|.+++||+++++...+++ .+..+++.||+||++..++...... ....++|+|+++++++|+
T Consensus 528 ~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~iv 607 (1389)
T TIGR03443 528 IPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVV 607 (1389)
T ss_pred CCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEE
Confidence 5789999999999999988876 4788999999999976554322110 123568999999999999
Q ss_pred CCC-------CCCcceEEEecCC
Q psy2847 68 DPD-------EEGNGEICLKDLI 83 (83)
Q Consensus 68 d~~-------~g~~Gei~~~~~~ 83 (83)
|++ .|+.|||+++||.
T Consensus 608 d~~~~~~~~~~G~~GEL~i~G~~ 630 (1389)
T TIGR03443 608 NRNDRTQTCGVGEVGEIYVRAGG 630 (1389)
T ss_pred CCccCCCcCCCCCceEEEecccc
Confidence 864 3788999999974
No 90
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.32 E-value=1.2e-11 Score=81.86 Aligned_cols=82 Identities=20% Similarity=0.304 Sum_probs=64.3
Q ss_pred CCCceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCC-----------cccCceecCcCCcEEEEEC
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDD-----------FKLDGVGRTIPGTQTKIVD 68 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~-----------~~~~~~g~p~~~~~~~v~d 68 (83)
+++++|.++++|+++++++.++| ++.++++.||+||++.++....... ....++|+|.++++++++|
T Consensus 292 ~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d 371 (542)
T PRK06018 292 KLPHLKMVVCGGSAMPRSMIKAFEDMGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD 371 (542)
T ss_pred CcccceEEEEcCCCCCHHHHHHHHHhCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC
Confidence 35789999999999999999988 7889999999999987654331110 1235789999999999999
Q ss_pred CCC-------CCcceEEEecCC
Q psy2847 69 PDE-------EGNGEICLKDLI 83 (83)
Q Consensus 69 ~~~-------g~~Gei~~~~~~ 83 (83)
++. +..|||+++|++
T Consensus 372 ~~~~~~~~~~~~~Gel~i~g~~ 393 (542)
T PRK06018 372 DAGKELPWDGKTFGRLKVRGPA 393 (542)
T ss_pred CCCCCCCCCCCceeEEEEecCC
Confidence 762 246999999863
No 91
>PRK12467 peptide synthase; Provisional
Probab=99.31 E-value=9.5e-12 Score=95.79 Aligned_cols=81 Identities=23% Similarity=0.212 Sum_probs=65.4
Q ss_pred CCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCC---C--cccCceecCcCCcEEEEECCC---
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPD---D--FKLDGVGRTIPGTQTKIVDPD--- 70 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~---~--~~~~~~g~p~~~~~~~v~d~~--- 70 (83)
++++|.+++||+++++++.++| + +..++|.||+||++..++..... . ....++|+|+++++++|+|++
T Consensus 1833 ~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~ 1912 (3956)
T PRK12467 1833 PLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNP 1912 (3956)
T ss_pred CCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCCCC
Confidence 5789999999999999999888 3 57799999999998655433221 1 234679999999999999976
Q ss_pred --CCCcceEEEecCC
Q psy2847 71 --EEGNGEICLKDLI 83 (83)
Q Consensus 71 --~g~~Gei~~~~~~ 83 (83)
.|..|||+++|+.
T Consensus 1913 vp~G~~GEl~i~G~~ 1927 (3956)
T PRK12467 1913 VPIGVAGELYLGGVG 1927 (3956)
T ss_pred CCCCCceEEEecccc
Confidence 4788999999863
No 92
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.30 E-value=1.6e-11 Score=78.92 Aligned_cols=79 Identities=30% Similarity=0.451 Sum_probs=62.0
Q ss_pred CceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCC-cccCceecCcCCcEEEEECCCCCCcceEEEe
Q psy2847 4 DRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDD-FKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 80 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~-~~~~~~g~p~~~~~~~v~d~~~g~~Gei~~~ 80 (83)
+++|.++++|+++++++.+++ .+..+++.||+||++..+.....+. .....+|+|++++++++.+++.++.|||+++
T Consensus 219 ~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~Gel~v~ 298 (436)
T TIGR01923 219 ENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKVDNKEGHGEIMVK 298 (436)
T ss_pred CceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEeCCCCCceEEEEE
Confidence 479999999999999999888 7889999999999987654433222 2222489999999999944444578999999
Q ss_pred cC
Q psy2847 81 DL 82 (83)
Q Consensus 81 ~~ 82 (83)
++
T Consensus 299 ~~ 300 (436)
T TIGR01923 299 GA 300 (436)
T ss_pred CC
Confidence 86
No 93
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.30 E-value=2.1e-11 Score=79.60 Aligned_cols=81 Identities=19% Similarity=0.252 Sum_probs=64.0
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCC-----CcccCceecCcCCcEEEEECCC--
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPD-----DFKLDGVGRTIPGTQTKIVDPD-- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~-----~~~~~~~g~p~~~~~~~v~d~~-- 70 (83)
+++++|.++++|+++++.+.+++ + +..+++.||+||++..+...... .....++|+|.++++++++|++
T Consensus 258 ~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~ 337 (503)
T PRK04813 258 HLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGT 337 (503)
T ss_pred cCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCC
Confidence 35789999999999999999888 4 67899999999987544332111 1234568999999999999876
Q ss_pred ---CCCcceEEEecC
Q psy2847 71 ---EEGNGEICLKDL 82 (83)
Q Consensus 71 ---~g~~Gei~~~~~ 82 (83)
.++.|||+++++
T Consensus 338 ~~~~g~~Gel~v~~~ 352 (503)
T PRK04813 338 KLPDGEQGEIVISGP 352 (503)
T ss_pred CCCCCCceEEEEecc
Confidence 367899999986
No 94
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.30 E-value=1.5e-11 Score=81.26 Aligned_cols=81 Identities=22% Similarity=0.307 Sum_probs=61.9
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC-----CcccCceecC--cCCcEEEEECCC--
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD-----DFKLDGVGRT--IPGTQTKIVDPD-- 70 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~-----~~~~~~~g~p--~~~~~~~v~d~~-- 70 (83)
++++|.++++|+++++++.+++ ++..+++.||+||++..++..... .....+.|.+ .++++++++|++
T Consensus 294 ~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~~g~ 373 (534)
T PRK05852 294 PAALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGSDGL 373 (534)
T ss_pred CCCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEECCCCC
Confidence 5689999999999999999888 788999999999998765543221 1111233433 689999999976
Q ss_pred ---CCCcceEEEecCC
Q psy2847 71 ---EEGNGEICLKDLI 83 (83)
Q Consensus 71 ---~g~~Gei~~~~~~ 83 (83)
.++.|||+++++.
T Consensus 374 ~~~~g~~Gel~v~g~~ 389 (534)
T PRK05852 374 PLPAGAVGEVWLRGTT 389 (534)
T ss_pred CCCCCCceEEEEecCc
Confidence 4678999999863
No 95
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.29 E-value=1.9e-11 Score=84.01 Aligned_cols=81 Identities=20% Similarity=0.197 Sum_probs=62.1
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cC-CeEecccCccccccceeecCC-CCcccCceecCcCCcEEEEECCC-----C
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LD-IAICEVFGMSECAGAHTVSAP-DDFKLDGVGRTIPGTQTKIVDPD-----E 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~-~~~~~~yG~tE~~~~~~~~~~-~~~~~~~~g~p~~~~~~~v~d~~-----~ 71 (83)
++++||.++++|++++++..+++ ++ .++++.||+||+++.+..... .....+++|.|.++++++|+|++ .
T Consensus 469 dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~ 548 (728)
T PLN03052 469 DWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPD 548 (728)
T ss_pred ChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCC
Confidence 56899999999999999887766 34 478999999999765432222 12346789999999999999976 2
Q ss_pred C--CcceEEEecC
Q psy2847 72 E--GNGEICLKDL 82 (83)
Q Consensus 72 g--~~Gei~~~~~ 82 (83)
| +.|||+++++
T Consensus 549 g~~~~GEL~v~~~ 561 (728)
T PLN03052 549 DAPCTGELALFPL 561 (728)
T ss_pred CCCceEEEEEeCC
Confidence 3 3599999753
No 96
>PRK05691 peptide synthase; Validated
Probab=99.29 E-value=1.6e-11 Score=94.96 Aligned_cols=81 Identities=22% Similarity=0.320 Sum_probs=66.1
Q ss_pred CCceEEEEEecCCCCHHHHHHh----cCCeEecccCccccccceeecCCCC----cccCceecCcCCcEEEEECCC----
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF----LDIAICEVFGMSECAGAHTVSAPDD----FKLDGVGRTIPGTQTKIVDPD---- 70 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~----~~~~~~~~yG~tE~~~~~~~~~~~~----~~~~~~g~p~~~~~~~v~d~~---- 70 (83)
+++||.+++||+++++++.++| .+..++|.||+||++..++...... .....+|+|++++++.|+|++
T Consensus 3982 ~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~ 4061 (4334)
T PRK05691 3982 LDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALELV 4061 (4334)
T ss_pred CCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCCCC
Confidence 5789999999999999999988 4678999999999987665433221 223469999999999999976
Q ss_pred -CCCcceEEEecCC
Q psy2847 71 -EEGNGEICLKDLI 83 (83)
Q Consensus 71 -~g~~Gei~~~~~~ 83 (83)
.|..|||+++|+.
T Consensus 4062 p~g~~GEL~i~G~~ 4075 (4334)
T PRK05691 4062 PLGAVGELCVAGTG 4075 (4334)
T ss_pred CCCCceEEEEeccc
Confidence 4789999999973
No 97
>KOG1177|consensus
Probab=99.28 E-value=3.8e-12 Score=83.45 Aligned_cols=82 Identities=24% Similarity=0.408 Sum_probs=68.6
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCC-eEecccCccccccceeecCCCC---cccCceecCcCCcEEEEECCC----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDI-AICEVFGMSECAGAHTVSAPDD---FKLDGVGRTIPGTQTKIVDPD---- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~-~~~~~yG~tE~~~~~~~~~~~~---~~~~~~g~p~~~~~~~v~d~~---- 70 (83)
+++++|.++.||+|+++++++++ .+. .+...||+||+++..++...++ .+..++|+.+++.+..++|.+
T Consensus 348 ~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g~~v 427 (596)
T KOG1177|consen 348 DLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDGSEV 427 (596)
T ss_pred chhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCCCcc
Confidence 46789999999999999999998 443 4888999999998777665544 556789999999999999976
Q ss_pred -CCCcceEEEecCC
Q psy2847 71 -EEGNGEICLKDLI 83 (83)
Q Consensus 71 -~g~~Gei~~~~~~ 83 (83)
-+..|||++||.+
T Consensus 428 ~~~~~Gel~iRGY~ 441 (596)
T KOG1177|consen 428 PLGTKGELLIRGYS 441 (596)
T ss_pred ccCCCceEEEEech
Confidence 2678999999863
No 98
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.26 E-value=3.3e-11 Score=79.71 Aligned_cols=81 Identities=30% Similarity=0.450 Sum_probs=62.1
Q ss_pred CCCceEEEEEecCCCCHHHHHHh------cCC---eEecccCccccccceeecCCC------------------------
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF------LDI---AICEVFGMSECAGAHTVSAPD------------------------ 48 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~------~~~---~~~~~yG~tE~~~~~~~~~~~------------------------ 48 (83)
+++++|.++++|+++++++.+++ ++. .+++.||+||++..+......
T Consensus 274 ~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (545)
T PRK07768 274 DLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATK 353 (545)
T ss_pred CchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCC
Confidence 45689999999999999998876 233 489999999997654432211
Q ss_pred --CcccCceecCcCCcEEEEECCC-----CCCcceEEEecC
Q psy2847 49 --DFKLDGVGRTIPGTQTKIVDPD-----EEGNGEICLKDL 82 (83)
Q Consensus 49 --~~~~~~~g~p~~~~~~~v~d~~-----~g~~Gei~~~~~ 82 (83)
....+++|+|+++++++++|++ .++.|||+++++
T Consensus 354 ~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~g~~Gel~v~~~ 394 (545)
T PRK07768 354 GNTRRLATLGPPLPGLEVRVVDEDGQVLPPRGVGVIELRGE 394 (545)
T ss_pred CCcceEEeccCCCCCCEEEEECCCCCCCCCCCEEEEEEccC
Confidence 0123578999999999999966 467899999985
No 99
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.22 E-value=3e-11 Score=80.66 Aligned_cols=82 Identities=24% Similarity=0.385 Sum_probs=62.2
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c---C---CeEecccCccccccceeecCCCC-----------------------
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L---D---IAICEVFGMSECAGAHTVSAPDD----------------------- 49 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~---~---~~~~~~yG~tE~~~~~~~~~~~~----------------------- 49 (83)
+++++|.+++||+++++++.+++ + + ..+++.||+||++..........
T Consensus 297 ~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (579)
T PRK09192 297 DLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGA 376 (579)
T ss_pred chhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCC
Confidence 46789999999999999998887 2 1 24889999999976554332210
Q ss_pred -----cccCceecCcCCcEEEEECCC-----CCCcceEEEecCC
Q psy2847 50 -----FKLDGVGRTIPGTQTKIVDPD-----EEGNGEICLKDLI 83 (83)
Q Consensus 50 -----~~~~~~g~p~~~~~~~v~d~~-----~g~~Gei~~~~~~ 83 (83)
....++|+|+++++++++|++ .++.|||+++|++
T Consensus 377 ~~~~~~~~~~vG~~~p~~~v~i~d~~~~~~~~g~~Gel~i~g~~ 420 (579)
T PRK09192 377 ETRRVRTFVNCGKALPGHEIEIRNEAGMPLPERVVGHICVRGPS 420 (579)
T ss_pred CCccceeEeecCCcCCCcEEEEECCCCCCCCCCCEEEEEecCCc
Confidence 012468999999999999976 3578999999863
No 100
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.20 E-value=1.4e-10 Score=77.36 Aligned_cols=79 Identities=22% Similarity=0.318 Sum_probs=62.1
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCC--------cccCceecCcCCcEEEEECCC--
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDD--------FKLDGVGRTIPGTQTKIVDPD-- 70 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~--------~~~~~~g~p~~~~~~~v~d~~-- 70 (83)
.++|.++++|++++++++++| ++.++++.||+||++..+....... ....++|++.++++++++|++
T Consensus 298 ~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~g~~ 377 (576)
T PRK05620 298 MSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVNDGQV 377 (576)
T ss_pred CceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecCCcc
Confidence 479999999999999999988 6888999999999987654432211 112467899999999999863
Q ss_pred ----CCCcceEEEecC
Q psy2847 71 ----EEGNGEICLKDL 82 (83)
Q Consensus 71 ----~g~~Gei~~~~~ 82 (83)
.++.|||+++|+
T Consensus 378 ~~~~~~~~Gel~v~g~ 393 (576)
T PRK05620 378 MESTDRNEGEIQVRGN 393 (576)
T ss_pred ccCCCCCceEEEEEcC
Confidence 246799999986
No 101
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.16 E-value=2.1e-10 Score=74.58 Aligned_cols=71 Identities=35% Similarity=0.501 Sum_probs=58.4
Q ss_pred CceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCCCCCcceEEEec
Q psy2847 4 DRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKD 81 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~~g~~Gei~~~~ 81 (83)
.++|.+++||+++++.+.+++ ++.++++.||+||++........+ ...++|+|++++++++.+ |||+++|
T Consensus 240 ~~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~--~~~~~G~~~~~~~~~i~~------gel~v~g 311 (458)
T PRK09029 240 LSLKAVLLGGAAIPVELTEQAEQQGIRCWCGYGLTEMASTVCAKRAD--GLAGVGSPLPGREVKLVD------GEIWLRG 311 (458)
T ss_pred CcceEEEECCCCCCHHHHHHHHHcCCcEeccccccccCcceeccCCC--CCCCCCCCCCCCEEEEeC------CEEEEec
Confidence 368999999999999999888 788899999999998654433322 234699999999999987 8998887
Q ss_pred C
Q psy2847 82 L 82 (83)
Q Consensus 82 ~ 82 (83)
+
T Consensus 312 ~ 312 (458)
T PRK09029 312 A 312 (458)
T ss_pred C
Confidence 6
No 102
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.15 E-value=3.2e-10 Score=75.33 Aligned_cols=77 Identities=23% Similarity=0.429 Sum_probs=60.1
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC-----CCCc
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD-----EEGN 74 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~-----~g~~ 74 (83)
.+++|.++.+| .++++.+++ ++.++++.||+||++.++.... ...+.+++|.|.++++++++|++ .++.
T Consensus 293 ~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~-~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~ 369 (542)
T PRK06155 293 AHRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTH-GSQRPGSMGRLAPGFEARVVDEHDQELPDGEP 369 (542)
T ss_pred cCceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecccccCccccCCC-CCCCCCCcCccCCCceEEEECCCCCCCCCCCc
Confidence 35788777665 467777777 7889999999999987655432 23456789999999999999876 3678
Q ss_pred ceEEEecC
Q psy2847 75 GEICLKDL 82 (83)
Q Consensus 75 Gei~~~~~ 82 (83)
|||+++++
T Consensus 370 Gei~v~~~ 377 (542)
T PRK06155 370 GELLLRAD 377 (542)
T ss_pred eEEEEecC
Confidence 99999986
No 103
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.14 E-value=6.2e-11 Score=76.72 Aligned_cols=81 Identities=28% Similarity=0.454 Sum_probs=66.2
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---cCCeEecccCcccccccee-ecCCCCcccCceecCc-CCcEEEEECCC-----C
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHT-VSAPDDFKLDGVGRTI-PGTQTKIVDPD-----E 71 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~-~~~~~~~~~~~~g~p~-~~~~~~v~d~~-----~ 71 (83)
+++|||.+-.||+.++++..+++ +++.+-++|||.|.-...+ +.++......+.|+|+ |.-+++|+|+| +
T Consensus 303 ~LsSLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~p 382 (542)
T COG1021 303 DLSSLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAP 382 (542)
T ss_pred CchheeEEeecCcccCHHHHhhchhhhCchHHHHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCC
Confidence 58999999999999999999999 8999999999999643222 1222225567899996 67789999987 5
Q ss_pred CCcceEEEecC
Q psy2847 72 EGNGEICLKDL 82 (83)
Q Consensus 72 g~~Gei~~~~~ 82 (83)
||.|+|..|||
T Consensus 383 GE~G~LltRGP 393 (542)
T COG1021 383 GEVGELLTRGP 393 (542)
T ss_pred CCcceeeecCC
Confidence 89999999998
No 104
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.13 E-value=4.5e-10 Score=73.85 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=59.3
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCC-CcccCceecCcCCcEEEEECCC-----CCCc
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPD-DFKLDGVGRTIPGTQTKIVDPD-----EEGN 74 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~g~p~~~~~~~v~d~~-----~g~~ 74 (83)
.++|.++++ .+++++..+++ ++..+++.||+||++..+...... .....++|+|+++++++++|++ .|+.
T Consensus 288 ~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~ 366 (517)
T PRK08008 288 HCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEI 366 (517)
T ss_pred ccceeeEEe-cCCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCCc
Confidence 457777775 47888888777 788999999999997654433222 2445689999999999999976 4678
Q ss_pred ceEEEec
Q psy2847 75 GEICLKD 81 (83)
Q Consensus 75 Gei~~~~ 81 (83)
|||++++
T Consensus 367 Gel~v~g 373 (517)
T PRK08008 367 GEICIKG 373 (517)
T ss_pred ceEEEeC
Confidence 9999997
No 105
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.10 E-value=3.8e-10 Score=71.44 Aligned_cols=64 Identities=23% Similarity=0.366 Sum_probs=53.7
Q ss_pred CCceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCCCCCcceEEEe
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLK 80 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~~g~~Gei~~~ 80 (83)
++++|.+++||+++++++.+++ ++..+++.||+||++..+. ..|+|++++++++.| |||+++
T Consensus 150 ~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~~~~~~----------~~G~~~~g~~v~i~~------Gei~v~ 213 (358)
T PRK07824 150 LAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSETSGGCV----------YDGVPLDGVRVRVED------GRIALG 213 (358)
T ss_pred cccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCccCCCcC----------cCceeCCCCEEEecC------CEEEEe
Confidence 5689999999999999999888 7888999999999865321 258899999999854 888888
Q ss_pred cC
Q psy2847 81 DL 82 (83)
Q Consensus 81 ~~ 82 (83)
|+
T Consensus 214 g~ 215 (358)
T PRK07824 214 GP 215 (358)
T ss_pred cC
Confidence 76
No 106
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.07 E-value=7.3e-10 Score=71.40 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=58.4
Q ss_pred ceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCCCCCcceEEEec
Q psy2847 5 RCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKD 81 (83)
Q Consensus 5 ~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~~g~~Gei~~~~ 81 (83)
+++.++++|+++++++.+++ ...++++.||+||++.+.... .....+.+|+|++++++++.+. .++.|||++++
T Consensus 213 ~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~--~~~~~~~~G~p~~~~~~~~~~~-~~~~gel~v~~ 288 (414)
T PRK08308 213 QFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICP--DMKSHLDLGNPLPHVSVSAGSD-ENAPEEIVVKM 288 (414)
T ss_pred cccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecC--CCCCCCccCccCCCeEEEEecC-CCCCceEEEEc
Confidence 68889999999999999988 556899999999998644322 1234567999999999998753 35678998875
No 107
>KOG1175|consensus
Probab=99.07 E-value=5.7e-10 Score=75.50 Aligned_cols=80 Identities=29% Similarity=0.487 Sum_probs=67.7
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cCC-eEecccCccccccceeecCCCC--cccCceecCcCCcEEEEECCC-----C
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LDI-AICEVFGMSECAGAHTVSAPDD--FKLDGVGRTIPGTQTKIVDPD-----E 71 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~~-~~~~~yG~tE~~~~~~~~~~~~--~~~~~~g~p~~~~~~~v~d~~-----~ 71 (83)
+++||++.++|+|+.++..+++ ++. ++.+.||+||+++.+....... .++++.+.|.+++.+.++|++ +
T Consensus 358 ~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~ 437 (626)
T KOG1175|consen 358 LKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPP 437 (626)
T ss_pred cceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCC
Confidence 3579999999999999999999 565 5999999999998876655544 678999999999999999986 2
Q ss_pred C-CcceEEEecC
Q psy2847 72 E-GNGEICLKDL 82 (83)
Q Consensus 72 g-~~Gei~~~~~ 82 (83)
+ +.|+|+++.+
T Consensus 438 ~~~~G~l~~~~~ 449 (626)
T KOG1175|consen 438 STGNGELRLKPP 449 (626)
T ss_pred CCceeEEEEeCC
Confidence 2 7899998865
No 108
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.04 E-value=1.3e-09 Score=72.10 Aligned_cols=82 Identities=21% Similarity=0.355 Sum_probs=58.3
Q ss_pred CCCceEEEEEec-CCCCHHHHHHh--cCCeEecccCccccccceeecCCCC---cccCceecCc-CCcEEEEECCC----
Q psy2847 2 GLDRCRVSLSGA-AAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDD---FKLDGVGRTI-PGTQTKIVDPD---- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg-~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~---~~~~~~g~p~-~~~~~~v~d~~---- 70 (83)
+++++|.+.+++ ++...+..+++ .+..+++.||+||++..+....... .+....|.|. +++.++++|++
T Consensus 292 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~ 371 (540)
T PRK06164 292 DFPSARLFGFASFAPALGELAALARARGVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGAL 371 (540)
T ss_pred CCcceeeeeeccCCcchHHHHHHHhhcCCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcC
Confidence 467888887766 45555565655 5788999999999987655443321 2234567775 78999999864
Q ss_pred --CCCcceEEEecCC
Q psy2847 71 --EEGNGEICLKDLI 83 (83)
Q Consensus 71 --~g~~Gei~~~~~~ 83 (83)
.|+.|||+++|++
T Consensus 372 ~~~g~~Gel~v~g~~ 386 (540)
T PRK06164 372 LPDGESGEIEIRAPS 386 (540)
T ss_pred CCCCCeeEEEEeccc
Confidence 4678999999963
No 109
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.02 E-value=2.2e-09 Score=70.39 Aligned_cols=73 Identities=16% Similarity=0.268 Sum_probs=54.2
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC------CCCc
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD------EEGN 74 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~------~g~~ 74 (83)
.++|.++++|+++++++.+++ +++.+++.||+||++ .+..+.. . .....+.+.+.++|+|++ .|+.
T Consensus 204 ~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~-~~~~c~~---~-~g~h~~~d~~~vEIvDp~~~~~vp~Ge~ 278 (445)
T TIGR03335 204 SSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGT-MCGECQA---V-AGLHVPEDLVHLDVYDPRHQRFLPDGEC 278 (445)
T ss_pred CcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhh-heEEecC---C-CCccccCCceEEEEEcCCCCCCCcCCCc
Confidence 579999999999999988777 789999999999985 3322211 1 122333456789999976 3678
Q ss_pred ceEEEec
Q psy2847 75 GEICLKD 81 (83)
Q Consensus 75 Gei~~~~ 81 (83)
|||++.+
T Consensus 279 GELvvT~ 285 (445)
T TIGR03335 279 GRIVLTT 285 (445)
T ss_pred eEEEEEe
Confidence 9999875
No 110
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.02 E-value=3.3e-09 Score=68.81 Aligned_cols=77 Identities=18% Similarity=0.330 Sum_probs=53.6
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCcccccc-ceeecCCCCcccCceecCcCCcEEEEECCC------CCC
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAG-AHTVSAPDDFKLDGVGRTIPGTQTKIVDPD------EEG 73 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~-~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~------~g~ 73 (83)
.++|.++++|++++++..+++ ++..+++.||+||+++ ........ ...+. ..+.+...++++|++ .|+
T Consensus 195 ~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~-~~~g~-~~~~~~~~~eivd~~~g~~v~~Ge 272 (422)
T TIGR02155 195 TSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVE-TQDGL-HIWEDHFYPEIIDPHTGEVLPDGE 272 (422)
T ss_pred CceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeecccc-cCCCc-eEecCeeEEEEECCCCCCCCCCCC
Confidence 479999999999999988888 7889999999999853 22221111 11111 122235677899853 478
Q ss_pred cceEEEecC
Q psy2847 74 NGEICLKDL 82 (83)
Q Consensus 74 ~Gei~~~~~ 82 (83)
.|||++++.
T Consensus 273 ~Gelvvt~~ 281 (422)
T TIGR02155 273 EGELVFTTL 281 (422)
T ss_pred eeEEEEecC
Confidence 899999864
No 111
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.02 E-value=1e-09 Score=73.23 Aligned_cols=81 Identities=23% Similarity=0.315 Sum_probs=55.7
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c---C---CeEecccCccccccceeecCCCCc----------------------
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L---D---IAICEVFGMSECAGAHTVSAPDDF---------------------- 50 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~---~---~~~~~~yG~tE~~~~~~~~~~~~~---------------------- 50 (83)
+++++|.+++||+++++++.++| + + ..+++.||+||++..+........
T Consensus 286 ~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 365 (578)
T PRK05850 286 DLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETG 365 (578)
T ss_pred chhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCC
Confidence 35689999999999999998887 3 2 368899999998754432211100
Q ss_pred ---ccCceecCcCCcEEEEECCC------CCCcceEEEecCC
Q psy2847 51 ---KLDGVGRTIPGTQTKIVDPD------EEGNGEICLKDLI 83 (83)
Q Consensus 51 ---~~~~~g~p~~~~~~~v~d~~------~g~~Gei~~~~~~ 83 (83)
.....|.|. +.+++++|++ .++.|||+++|+.
T Consensus 366 ~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~ 406 (578)
T PRK05850 366 GGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDN 406 (578)
T ss_pred CCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCc
Confidence 001234443 5788998854 3678999999974
No 112
>PRK06178 acyl-CoA synthetase; Validated
Probab=98.99 E-value=3.3e-09 Score=70.65 Aligned_cols=81 Identities=23% Similarity=0.303 Sum_probs=58.4
Q ss_pred CCceEEEEEe--cCCCCHHHHHHh---cCCeEe-cccCccccccceeecCC---C----CcccCceecCcCCcEEEEECC
Q psy2847 3 LDRCRVSLSG--AAAISTELKRYF---LDIAIC-EVFGMSECAGAHTVSAP---D----DFKLDGVGRTIPGTQTKIVDP 69 (83)
Q Consensus 3 l~~lr~~~~g--g~~~~~~~~~~~---~~~~~~-~~yG~tE~~~~~~~~~~---~----~~~~~~~g~p~~~~~~~v~d~ 69 (83)
++++|.++.+ ++++++++.+++ ++..++ +.||+||++..+..... . ....+++|+|+++++++++|+
T Consensus 324 l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~ 403 (567)
T PRK06178 324 LSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDF 403 (567)
T ss_pred cchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcC
Confidence 4567776543 488999999888 566655 47999998765433211 1 123467899999999999995
Q ss_pred C------CCCcceEEEecCC
Q psy2847 70 D------EEGNGEICLKDLI 83 (83)
Q Consensus 70 ~------~g~~Gei~~~~~~ 83 (83)
+ .|+.|||+++|++
T Consensus 404 ~~~~~~~~g~~Gel~v~g~~ 423 (567)
T PRK06178 404 ETGELLPLGAEGEIVVRTPS 423 (567)
T ss_pred CCCCcCCCCCceEEEEECCc
Confidence 4 4678999999874
No 113
>PLN02479 acetate-CoA ligase
Probab=98.93 E-value=7.1e-09 Score=69.27 Aligned_cols=81 Identities=22% Similarity=0.282 Sum_probs=57.5
Q ss_pred CCCceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecC---C------C-C-cccCceecCcCCcE-EEEE
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSA---P------D-D-FKLDGVGRTIPGTQ-TKIV 67 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~---~------~-~-~~~~~~g~p~~~~~-~~v~ 67 (83)
.++++|.++++|+++++++.++| .+.++++.||+||+++.+.... . . . ......|.+.+++. ++++
T Consensus 308 ~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~ 387 (567)
T PLN02479 308 PLPRVVHVMTAGAAPPPSVLFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVV 387 (567)
T ss_pred cccceeEEEEcCCCCCHHHHHHHHhcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEE
Confidence 35789999999999999999988 6788999999999854332211 0 0 0 11134677777765 7888
Q ss_pred CCC-------C-CCcceEEEecC
Q psy2847 68 DPD-------E-EGNGEICLKDL 82 (83)
Q Consensus 68 d~~-------~-g~~Gei~~~~~ 82 (83)
|++ + ++.|||+++|+
T Consensus 388 d~~~~~~~~~~g~~~GEl~v~g~ 410 (567)
T PLN02479 388 DTKTMKPVPADGKTMGEIVMRGN 410 (567)
T ss_pred cCCCCcccCCCCCCceEEEEecc
Confidence 743 1 25799999986
No 114
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.90 E-value=7.4e-09 Score=73.42 Aligned_cols=76 Identities=16% Similarity=0.279 Sum_probs=54.5
Q ss_pred CCceEEEEEecCCCCHHHHHHh---cC-CeEecccCccccccceeecCCCCcccCceecCcCCc-EEEEE----------
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF---LD-IAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGT-QTKIV---------- 67 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~---~~-~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~-~~~v~---------- 67 (83)
++++|.++ |+.+++++.+++ ++ ..+++.||+||++...... ...+.+++|+|++++ ++++.
T Consensus 719 ~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~~--~~~~~~svG~p~pg~~~v~i~~~d~~~g~li 794 (994)
T PRK07868 719 NHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLANV--SGAKIGSKGRPLPGAGRVELAAYDPEHDLIL 794 (994)
T ss_pred CCceEEEe--cCCCCHHHHHHHHHHhCchheeeeeeccccccccccc--CCCCCcccCCccCCCCceeEEEecCcCCcee
Confidence 45789765 345899999888 54 7899999999986543221 224567899999997 56653
Q ss_pred -CCC-------CCCcceEEEecC
Q psy2847 68 -DPD-------EEGNGEICLKDL 82 (83)
Q Consensus 68 -d~~-------~g~~Gei~~~~~ 82 (83)
|++ .|+.|||+++++
T Consensus 795 ~d~~G~~~~~~~ge~Gel~~~~~ 817 (994)
T PRK07868 795 EDDRGFVRRAEVNEVGVLLARAR 817 (994)
T ss_pred ecCCceEEEcCCCCceEEEEecC
Confidence 222 367899999986
No 115
>PRK07798 acyl-CoA synthetase; Validated
Probab=98.87 E-value=2.2e-08 Score=65.79 Aligned_cols=77 Identities=22% Similarity=0.247 Sum_probs=55.5
Q ss_pred CCCceEEEEEecCCCCHHHHHHh---c-CCeEecccCccccccceeecCCCCcccCce--ecCcCCcEEEEECCC-----
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF---L-DIAICEVFGMSECAGAHTVSAPDDFKLDGV--GRTIPGTQTKIVDPD----- 70 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~---~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~--g~p~~~~~~~v~d~~----- 70 (83)
+++++|.+++||+++++++.+++ + +..+++.||+||++.+......... ... +++.++..++++|++
T Consensus 294 ~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~--~~~g~~~~~~~~~~~i~~~~~~~~~ 371 (533)
T PRK07798 294 DLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKGA--VHTGGPRFTIGPRTVVLDEDGNPVE 371 (533)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCCC--ccCCCCccCCCceEEEECCCCCCCC
Confidence 35689999999999999999888 4 7789999999998654433222111 122 377889999999876
Q ss_pred CCCc--ceEEEe
Q psy2847 71 EEGN--GEICLK 80 (83)
Q Consensus 71 ~g~~--Gei~~~ 80 (83)
.++. |+|+..
T Consensus 372 ~g~~~~g~l~~~ 383 (533)
T PRK07798 372 PGSGEIGWIARR 383 (533)
T ss_pred CCCCCeeEEEee
Confidence 2444 666543
No 116
>PLN03102 acyl-activating enzyme; Provisional
Probab=98.80 E-value=3.4e-08 Score=66.32 Aligned_cols=39 Identities=18% Similarity=0.343 Sum_probs=33.8
Q ss_pred CceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccce
Q psy2847 4 DRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAH 42 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~ 42 (83)
++++.+++||+++++.+.+++ ++..+++.||+||+++.+
T Consensus 300 ~~~~~~~~gg~~~~~~~~~~~~~~g~~i~~~YG~tE~~~~~ 340 (579)
T PLN03102 300 SGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGLTEATGPV 340 (579)
T ss_pred ccceEEEECCCCCCHHHHHHHHHcCCeEEeecCccccCccc
Confidence 467889999999999998888 788999999999997543
No 117
>PRK13388 acyl-CoA synthetase; Provisional
Probab=98.77 E-value=5.8e-08 Score=64.64 Aligned_cols=74 Identities=22% Similarity=0.209 Sum_probs=50.9
Q ss_pred ceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEE-----------EECCC
Q psy2847 5 RCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK-----------IVDPD 70 (83)
Q Consensus 5 ~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~-----------v~d~~ 70 (83)
++|. .+ |+++.++..+++ ++.++++.||+||++.++.... ....+++|+|++++++. ++|++
T Consensus 266 ~l~~-~~-G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~--~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~ 341 (540)
T PRK13388 266 PLRV-AF-GNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVVREP--GTPPGSIGRGAPGVAIYNPETLTECAVARFDAH 341 (540)
T ss_pred ceEE-EE-CCCCCHHHHHHHHHHhCCceecccccccccceeecCC--CCCCCCCCCCCCCcEEEcCCCCccccceeccCc
Confidence 4563 33 556677777777 6888999999999986654332 23457899999987653 23332
Q ss_pred ------CCCcceEEEe-cC
Q psy2847 71 ------EEGNGEICLK-DL 82 (83)
Q Consensus 71 ------~g~~Gei~~~-~~ 82 (83)
.++.|||+++ |+
T Consensus 342 g~~~~~~~~~GEl~v~~g~ 360 (540)
T PRK13388 342 GALLNADEAIGELVNTAGA 360 (540)
T ss_pred cccccCCCcceEEEEecCC
Confidence 2457999998 65
No 118
>PRK07867 acyl-CoA synthetase; Validated
Probab=98.76 E-value=4.6e-08 Score=65.02 Aligned_cols=73 Identities=26% Similarity=0.375 Sum_probs=51.2
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC------CCC-
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD------EEG- 73 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~------~g~- 73 (83)
+++| +++||+++++.. +++ ++.++++.||+||++..+...+ ....+++|.|.++ ++++|++ .++
T Consensus 267 ~~lr-~~~gg~~~~~~~-~~~~~~~g~~l~~~YG~TE~~~~~~~~~--~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~ 340 (529)
T PRK07867 267 NPLR-IVYGNEGAPGDI-ARFARRFGCVVVDGFGSTEGGVAITRTP--DTPPGALGPLPPG--VAIVDPDTGTECPPAED 340 (529)
T ss_pred cceE-EEecCCCChHHH-HHHHHHhCCcEEEeecccccccccccCC--CCCCCCcCCCCCC--EEEEECCCCCCCCCCcc
Confidence 4677 456888887664 445 7889999999999875543222 2345678999998 6666643 234
Q ss_pred -----------cceEEE-ecC
Q psy2847 74 -----------NGEICL-KDL 82 (83)
Q Consensus 74 -----------~Gei~~-~~~ 82 (83)
.|||++ +++
T Consensus 341 ~~~~~~~~~~~~Gel~i~~g~ 361 (529)
T PRK07867 341 ADGRLLNADEAIGELVNTAGP 361 (529)
T ss_pred ccccccccCCcceEEEEecCC
Confidence 799998 875
No 119
>PRK08162 acyl-CoA synthetase; Validated
Probab=98.69 E-value=1.6e-07 Score=62.33 Aligned_cols=79 Identities=23% Similarity=0.291 Sum_probs=54.2
Q ss_pred CceEEEEEecCCCCHHHHHHh--cCCeEecccCccccccceeecCCCC-----------cccCceecCcCC-cEEEEECC
Q psy2847 4 DRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSECAGAHTVSAPDD-----------FKLDGVGRTIPG-TQTKIVDP 69 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~~~~~~~~~~~~-----------~~~~~~g~p~~~-~~~~v~d~ 69 (83)
.+.+.++++|+++++++.+++ ++.++++.||+||+++.+..+.... ......|.+.+. ..++++|+
T Consensus 296 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~ 375 (545)
T PRK08162 296 DHPVHAMVAGAAPPAAVIAKMEEIGFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDP 375 (545)
T ss_pred ccceEEEECCCCCCHHHHHHHHHhCCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcC
Confidence 456677899999999998888 7888999999999865444332110 112345666543 35788885
Q ss_pred CC-------C-CcceEEEecC
Q psy2847 70 DE-------E-GNGEICLKDL 82 (83)
Q Consensus 70 ~~-------g-~~Gei~~~~~ 82 (83)
+. + +.|||+++++
T Consensus 376 ~~~~~~~~~g~~~Gel~v~g~ 396 (545)
T PRK08162 376 DTMQPVPADGETIGEIMFRGN 396 (545)
T ss_pred CCCcccCCCCCceeEEEEecC
Confidence 41 2 3699999986
No 120
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=98.69 E-value=9.1e-08 Score=62.76 Aligned_cols=75 Identities=19% Similarity=0.311 Sum_probs=55.6
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC------CCCc
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD------EEGN 74 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~------~g~~ 74 (83)
.++|.+++|++++++++.+.+ +++..++.||+||..+..++. +... .......++..+.++|++ .|+.
T Consensus 210 ~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g~~e-C~~~--~glhi~eD~~~~Ei~dP~t~e~l~dge~ 286 (438)
T COG1541 210 LSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPGAGE-CTER--NGLHIWEDHFIFEIVDPETGEQLPDGER 286 (438)
T ss_pred cceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCcccc-cccc--cCCCcchhhceeeeecCCcCccCCCCCe
Confidence 479999999999999999998 899999999999997663221 1111 123344567778899976 3567
Q ss_pred ceEEEec
Q psy2847 75 GEICLKD 81 (83)
Q Consensus 75 Gei~~~~ 81 (83)
|||++..
T Consensus 287 GelV~T~ 293 (438)
T COG1541 287 GELVITT 293 (438)
T ss_pred eEEEEEe
Confidence 9998754
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.41 E-value=1.6e-06 Score=58.78 Aligned_cols=78 Identities=23% Similarity=0.252 Sum_probs=60.1
Q ss_pred ceEEEEEecCCCCHHHHHHh---c--CCeEecccCccccccceeecCCCCcc--cCceecCcCCcEEEEECCC-----CC
Q psy2847 5 RCRVSLSGAAAISTELKRYF---L--DIAICEVFGMSECAGAHTVSAPDDFK--LDGVGRTIPGTQTKIVDPD-----EE 72 (83)
Q Consensus 5 ~lr~~~~gg~~~~~~~~~~~---~--~~~~~~~yG~tE~~~~~~~~~~~~~~--~~~~g~p~~~~~~~v~d~~-----~g 72 (83)
.+|.++++|++++..+.+++ . ...+.+.||.||+............. ...+|+|+++.++.++|+. .+
T Consensus 486 ~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~g 565 (642)
T COG1020 486 RLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLG 565 (642)
T ss_pred cccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCC
Confidence 48999999999999999887 2 35799999999966544433322211 4579999999999999954 36
Q ss_pred CcceEEEecC
Q psy2847 73 GNGEICLKDL 82 (83)
Q Consensus 73 ~~Gei~~~~~ 82 (83)
..||+++.|.
T Consensus 566 v~gel~i~g~ 575 (642)
T COG1020 566 VPGELYIAGL 575 (642)
T ss_pred CCeeeEECCc
Confidence 7799999874
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.05 E-value=5.3e-06 Score=53.92 Aligned_cols=57 Identities=25% Similarity=0.270 Sum_probs=39.1
Q ss_pred CCceEEEEEecCCCCHHHHHHh--cC-CeEecccCccccccceeecCCCCcccCceecCcCCcEEE
Q psy2847 3 LDRCRVSLSGAAAISTELKRYF--LD-IAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTK 65 (83)
Q Consensus 3 l~~lr~~~~gg~~~~~~~~~~~--~~-~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 65 (83)
++++|. +++|+++++++.+++ .+ ..+++.||+||+++++..... ...++|.++.+++
T Consensus 205 l~slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~~~~~~-----~~~~~~~p~~~~~ 264 (386)
T TIGR02372 205 LPGVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIGLREAP-----DDPFRLLPDLACF 264 (386)
T ss_pred CCccee-EecCCCCCHHHHHHHHHhcccchhheeccccccccccccCC-----CCCcccCCCcccc
Confidence 456775 688999999999888 54 368999999999875543211 2234555555443
No 123
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=98.01 E-value=3.2e-05 Score=52.21 Aligned_cols=52 Identities=21% Similarity=0.163 Sum_probs=33.7
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCC-eEecccCccccccceeecCCCCcccCceecCcC
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDI-AICEVFGMSECAGAHTVSAPDDFKLDGVGRTIP 60 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~-~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~ 60 (83)
.++|.+ .|+++++++.+++ ++. .+++.||+||++.... .. ....+++|++.+
T Consensus 314 ~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~-~~--~~~~~~~g~~~~ 369 (600)
T PRK08279 314 HRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFI-NV--FNFDGTVGRVPL 369 (600)
T ss_pred cceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeec-cc--CCCCcccccccc
Confidence 456653 4777999999888 554 5999999999874322 21 123345665444
No 124
>PTZ00297 pantothenate kinase; Provisional
Probab=97.75 E-value=8.3e-05 Score=55.23 Aligned_cols=73 Identities=21% Similarity=0.232 Sum_probs=48.6
Q ss_pred CCCCceEEEEEecC--CCCHHHHHHhcCCeEecccCccccccceeecCCCCcccCceecCcCCcEEEEECCC----CCCc
Q psy2847 1 MGLDRCRVSLSGAA--AISTELKRYFLDIAICEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPD----EEGN 74 (83)
Q Consensus 1 ~~l~~lr~~~~gg~--~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~----~g~~ 74 (83)
|| .++|.+++||+ +++..+. .+..++..||+||+. +.+.....+ ..|+|+|++++++.|.+ ....
T Consensus 755 lG-Grlr~~isGga~~~l~~~l~---~~i~i~~g~glTE~~---~~~~~~~~~--~~G~PlpgvEvKI~~~~E~~~~~~~ 825 (1452)
T PTZ00297 755 LG-GCVEKIVLCVSEESTSFSLL---EHISVCYVPCLREVF---FLPSEGVFC--VDGTPAPSLQVDLEPFDEPSDGAGI 825 (1452)
T ss_pred hc-CCeEEEEECCCccccChHHh---CCceEEEecceEEee---eecCCCCcc--cCCeecCceEEEEcccccccCCCCC
Confidence 35 67999999974 4432221 456788899999953 233332222 23999999999998742 2346
Q ss_pred ceEEEecC
Q psy2847 75 GEICLKDL 82 (83)
Q Consensus 75 Gei~~~~~ 82 (83)
|||++++.
T Consensus 826 GEIlvr~~ 833 (1452)
T PTZ00297 826 GQLVLAKK 833 (1452)
T ss_pred CeEEEEEC
Confidence 99999863
No 125
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=97.66 E-value=0.00023 Score=47.12 Aligned_cols=40 Identities=8% Similarity=0.160 Sum_probs=33.3
Q ss_pred ceEEEEEecCCCCHHHHHHh---cCCeEecccCccccccceeec
Q psy2847 5 RCRVSLSGAAAISTELKRYF---LDIAICEVFGMSECAGAHTVS 45 (83)
Q Consensus 5 ~lr~~~~gg~~~~~~~~~~~---~~~~~~~~yG~tE~~~~~~~~ 45 (83)
++|.++++|++++++..+.+ |++++++.||+|| +.+++.+
T Consensus 213 ~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la~eC 255 (430)
T TIGR02304 213 KPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLASTC 255 (430)
T ss_pred CceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheEEec
Confidence 68999999999999887766 8999999999999 5454444
No 126
>KOG1179|consensus
Probab=92.77 E-value=0.55 Score=32.81 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=22.5
Q ss_pred cCCCCHHHHHHh---cCC-eEecccCccccccce
Q psy2847 13 AAAISTELKRYF---LDI-AICEVFGMSECAGAH 42 (83)
Q Consensus 13 g~~~~~~~~~~~---~~~-~~~~~yG~tE~~~~~ 42 (83)
|..+.+++++.+ |+. .+.+.||+||.....
T Consensus 364 GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~ 397 (649)
T KOG1179|consen 364 GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNL 397 (649)
T ss_pred cCCCCchHHHHHHHHcCCCeEEEEeccccCccee
Confidence 445677888887 765 499999999986543
No 127
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=92.32 E-value=0.6 Score=30.70 Aligned_cols=31 Identities=23% Similarity=0.331 Sum_probs=20.0
Q ss_pred CCCHHHHHH-h---cCC----eEecccCccccccceeec
Q psy2847 15 AISTELKRY-F---LDI----AICEVFGMSECAGAHTVS 45 (83)
Q Consensus 15 ~~~~~~~~~-~---~~~----~~~~~yG~tE~~~~~~~~ 45 (83)
.++.+.... + +++ .+++.|||||.....+.+
T Consensus 238 ~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~ 276 (365)
T PF04443_consen 238 AVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYEC 276 (365)
T ss_pred ccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeC
Confidence 455544433 3 665 699999999987554433
No 128
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=74.10 E-value=4.6 Score=25.33 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=28.3
Q ss_pred ceEEEEEecCCCCHHHHHHh-cCCeEecccCcc
Q psy2847 5 RCRVSLSGAAAISTELKRYF-LDIAICEVFGMS 36 (83)
Q Consensus 5 ~lr~~~~gg~~~~~~~~~~~-~~~~~~~~yG~t 36 (83)
+...++++|+-+++++++.. .+.+++|..++|
T Consensus 28 ~advviYAGSLV~~elL~~~~~~aei~nSa~~t 60 (254)
T COG2875 28 KADVVIYAGSLVPPELLEYCRPDAEIVNSASLT 60 (254)
T ss_pred hCCEEEECCCcCCHHHHhhcCCCCEEEecCcCC
Confidence 34578999999999999999 899999999988
No 129
>KOG3628|consensus
Probab=69.82 E-value=6.1 Score=30.18 Aligned_cols=28 Identities=29% Similarity=0.393 Sum_probs=22.6
Q ss_pred ecCcCCcEEEEECCC------CCCcceEEEecCC
Q psy2847 56 GRTIPGTQTKIVDPD------EEGNGEICLKDLI 83 (83)
Q Consensus 56 g~p~~~~~~~v~d~~------~g~~Gei~~~~~~ 83 (83)
|...+.+++.+++++ .++.||||+.+.+
T Consensus 1156 G~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~h 1189 (1363)
T KOG3628|consen 1156 GKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAH 1189 (1363)
T ss_pred CcccccceeEEeCCccccccccCCcceEEecccc
Confidence 555678899999987 4789999998753
No 130
>KOG3628|consensus
Probab=60.72 E-value=12 Score=28.77 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=16.6
Q ss_pred CcEEEEECCC------CCCcceEEEecCC
Q psy2847 61 GTQTKIVDPD------EEGNGEICLKDLI 83 (83)
Q Consensus 61 ~~~~~v~d~~------~g~~Gei~~~~~~ 83 (83)
++.+.|+++| .++.||||+.+++
T Consensus 511 ~~t~~vv~~~t~~LC~~~eVGEIwVsS~~ 539 (1363)
T KOG3628|consen 511 DATLAVVNPDTNQLCKTDEVGEIWVSSNS 539 (1363)
T ss_pred ceEEEEeCCCcccccccCcceeEEEecCC
Confidence 3456666666 4789999998764
No 131
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=54.40 E-value=22 Score=17.99 Aligned_cols=16 Identities=19% Similarity=0.349 Sum_probs=12.4
Q ss_pred eecCcCCcEEEEECCC
Q psy2847 55 VGRTIPGTQTKIVDPD 70 (83)
Q Consensus 55 ~g~p~~~~~~~v~d~~ 70 (83)
-++|..++++++.|.+
T Consensus 7 ~~~P~~~~~V~L~e~d 22 (80)
T PF01060_consen 7 GGKPAKNVKVKLWEDD 22 (80)
T ss_pred CCccCCCCEEEEEECC
Confidence 3678888888888765
No 132
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=51.97 E-value=7.5 Score=13.79 Aligned_cols=9 Identities=33% Similarity=0.693 Sum_probs=5.9
Q ss_pred ccCcccccc
Q psy2847 32 VFGMSECAG 40 (83)
Q Consensus 32 ~yG~tE~~~ 40 (83)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 378887643
No 133
>PF04915 DltD_N: DltD N-terminal region; InterPro: IPR006999 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the N-terminal region of DltD.; PDB: 3BMA_C.
Probab=46.58 E-value=17 Score=17.91 Aligned_cols=15 Identities=27% Similarity=0.317 Sum_probs=10.6
Q ss_pred cCCeEecccCccccc
Q psy2847 25 LDIAICEVFGMSECA 39 (83)
Q Consensus 25 ~~~~~~~~yG~tE~~ 39 (83)
.+..++..||+||..
T Consensus 26 ~~~~yvPfyGSSEl~ 40 (62)
T PF04915_consen 26 KDPKYVPFYGSSELS 40 (62)
T ss_dssp SSS-EEEEE-SSTTT
T ss_pred cCCCeeeecCcHHHh
Confidence 356799999999975
No 134
>PRK13584 hisG ATP phosphoribosyltransferase catalytic subunit; Provisional
Probab=40.44 E-value=71 Score=19.59 Aligned_cols=21 Identities=19% Similarity=0.281 Sum_probs=16.1
Q ss_pred cCCeEecccCccccccceeec
Q psy2847 25 LDIAICEVFGMSECAGAHTVS 45 (83)
Q Consensus 25 ~~~~~~~~yG~tE~~~~~~~~ 45 (83)
.+..++..+|++|..+...+.
T Consensus 125 i~~~ii~l~GsvElaP~~GlA 145 (204)
T PRK13584 125 IDVELIKLNGSVELACVVDMV 145 (204)
T ss_pred CeEEEEECCCceeeccccCCc
Confidence 457799999999997765443
No 135
>PRK01686 hisG ATP phosphoribosyltransferase catalytic subunit; Reviewed
Probab=39.47 E-value=85 Score=19.37 Aligned_cols=20 Identities=20% Similarity=0.282 Sum_probs=15.4
Q ss_pred cCCeEecccCccccccceee
Q psy2847 25 LDIAICEVFGMSECAGAHTV 44 (83)
Q Consensus 25 ~~~~~~~~yG~tE~~~~~~~ 44 (83)
.+..++..+|++|..+...+
T Consensus 135 v~~~iv~l~GsvE~aP~~Gl 154 (215)
T PRK01686 135 EQVEIIKLYGSVELAPLVGL 154 (215)
T ss_pred CeEEEEECcCceeeccccCC
Confidence 35779999999999766533
No 136
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=36.54 E-value=60 Score=17.12 Aligned_cols=16 Identities=19% Similarity=0.536 Sum_probs=14.0
Q ss_pred CceecCcCCcEEEEEC
Q psy2847 53 DGVGRTIPGTQTKIVD 68 (83)
Q Consensus 53 ~~~g~p~~~~~~~v~d 68 (83)
-.-|+|++++++++.+
T Consensus 22 L~tg~Pv~ga~V~l~~ 37 (97)
T PF11974_consen 22 LSTGKPVAGAEVELYD 37 (97)
T ss_pred CCCCCccCCCEEEEEE
Confidence 4568999999999998
No 137
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=35.50 E-value=60 Score=17.04 Aligned_cols=17 Identities=18% Similarity=0.454 Sum_probs=14.3
Q ss_pred ceecCcCCcEEEEECCC
Q psy2847 54 GVGRTIPGTQTKIVDPD 70 (83)
Q Consensus 54 ~~g~p~~~~~~~v~d~~ 70 (83)
.-|.|+++..++++|..
T Consensus 16 ~~G~Pv~gAyVRLLD~s 32 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLDSS 32 (85)
T ss_pred cCCcCCCCeEEEEEcCC
Confidence 46789999999999975
No 138
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=35.00 E-value=28 Score=18.34 Aligned_cols=29 Identities=17% Similarity=0.329 Sum_probs=18.1
Q ss_pred CCCCceEEEEEecCCCCHHHHHHh--cCCeE
Q psy2847 1 MGLDRCRVSLSGAAAISTELKRYF--LDIAI 29 (83)
Q Consensus 1 ~~l~~lr~~~~gg~~~~~~~~~~~--~~~~~ 29 (83)
|++...+.++.||.++...-.+.+ .+..+
T Consensus 3 l~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v 33 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPVAARKARLLLEAGAKV 33 (103)
T ss_dssp E--TT-EEEEEEESHHHHHHHHHHCCCTBEE
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhCCCEE
Confidence 457788999999988766655665 45443
No 139
>PF05726 Pirin_C: Pirin C-terminal cupin domain; InterPro: IPR008778 This entry represents C-terminal domain of Pirin proteins from both eukaryotes and prokaryotes. The function of Pirin is unknown but the gene coding for this protein is known to be expressed in all tissues in the human body although it is expressed most strongly in the liver and heart. Pirin is known to be a nuclear protein, exclusively localised within the nucleoplasma and predominantly concentrated within dot-like subnuclear structures []. Pirin is composed of two structurally similar domains arranged face to face. The N-terminal domain additionally features four beta-strands, and the C-terminal domain also includes four additional -strands and a short alpha-helix. Although the two domains are similar, the C-terminal domain of Pirin differs from the N-terminal domain as it does not contain a metal binding site and its sequence does not contain the conserved metal-coordinating residues []. Pirin is confirmed to be a member of the cupin superfamily on the basis of primary sequence and structural similarity. The presence of a metal binding site in the N-terminal beta-barrel of Pirin, may be significant in its role in regulating NFI DNA replication and NF-kappaB transcription factor activity []. Pirin structure has been found to closely resemble members of the cupin superfamily. Pirin contains the two characteristic sequences of the cupin superfamily, namely PG-(X)5-HXH-(X)4-E-(X)6-G and G-(X)5-PXG-(X)2-H-(X)3-N separated by a variable stretch of 15-50 amino acids. These motifs are best conserved in the N-terminal where the conserved histidine and glutamic acid residues correspond to the metal-coordinating residues. The C-terminal domain motifs lack the metal binding residues normally associated with the cupin fold []. Pirin was identified to be a metal-binding protein [], and was found that the metal-binding residues of Pirins are highly conserved across mammals, plants, fungi, and prokaryotic organisms. Pirin acts as a cofactor for the transcription factor NFI, the regulatory mechanism of which is generally believed to require the assistance of a metal ion []. Structural data supports the hypothesis that the bound iron of Pirin may participate in this transcriptional regulation by enhancing and stabilising the formation of the p50,Bcl3,DNA complex []. Metals have been implicated directly or indirectly in the NF-kappaB family of transcription factors that control expression of a number of early response genes associated with inflammatory responses, cell growth, cell cycle progression, and neoplastic transformation []. However, most metal-dependent transcription factors are DNA-binding proteins that bind to specific sequences when the metal binds to the protein. Pirin, on the other hand, appears to function differently and bind to the transcription factor DNA complex [].; PDB: 1J1L_A 3ACL_A 2P17_A.
Probab=31.34 E-value=9.8 Score=20.26 Aligned_cols=21 Identities=19% Similarity=0.358 Sum_probs=10.7
Q ss_pred CceEEEEEecCCCCHHHHHHh
Q psy2847 4 DRCRVSLSGAAAISTELKRYF 24 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~ 24 (83)
...|.++.+|+|+......++
T Consensus 61 ~~a~~lll~GePl~Epi~~~G 81 (104)
T PF05726_consen 61 EGARFLLLGGEPLNEPIVQYG 81 (104)
T ss_dssp SSEEEEEEEE----S--EEET
T ss_pred CCcEEEEEEccCCCCCEEEEC
Confidence 357899999999886654443
No 140
>PRK13399 fructose-1,6-bisphosphate aldolase; Provisional
Probab=31.11 E-value=62 Score=21.51 Aligned_cols=33 Identities=15% Similarity=0.345 Sum_probs=23.0
Q ss_pred eEEEEEecCCCCHHHHHHh--cCCeEecccCcccc
Q psy2847 6 CRVSLSGAAAISTELKRYF--LDIAICEVFGMSEC 38 (83)
Q Consensus 6 lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~ 38 (83)
+-.++.||.-+++++++.+ .+-.+-+.||.++-
T Consensus 227 vPLVLHGgSGvp~~~~~~~~~~g~~~~~~~g~~~e 261 (347)
T PRK13399 227 THLVMHGSSSVPQELQEIINAYGGKMKETYGVPVE 261 (347)
T ss_pred CCEEEeCCCCCCHHHHHHHHHhcCCccccCCCCHH
Confidence 4468899999987776666 55566677776643
No 141
>PF13213 DUF4021: Protein of unknown function (DUF4021)
Probab=29.23 E-value=24 Score=16.15 Aligned_cols=11 Identities=27% Similarity=0.634 Sum_probs=8.5
Q ss_pred EecccCccccc
Q psy2847 29 ICEVFGMSECA 39 (83)
Q Consensus 29 ~~~~yG~tE~~ 39 (83)
+.-.|||-|+.
T Consensus 26 MNGlYGMPET~ 36 (46)
T PF13213_consen 26 MNGLYGMPETD 36 (46)
T ss_pred hccccCCCccc
Confidence 45679999975
No 142
>KOG2531|consensus
Probab=29.12 E-value=88 Score=21.98 Aligned_cols=29 Identities=10% Similarity=0.296 Sum_probs=25.2
Q ss_pred CceEEEEEecCCCCHHHHHHh---cCCeEecc
Q psy2847 4 DRCRVSLSGAAAISTELKRYF---LDIAICEV 32 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~---~~~~~~~~ 32 (83)
+..|.+++||+.-...+++.+ |+.++++.
T Consensus 442 ~~~rilvtGGAS~N~~Ilq~iadVf~apVy~~ 473 (545)
T KOG2531|consen 442 PPTRILVTGGASRNEAILQIIADVFGAPVYTI 473 (545)
T ss_pred CCceEEEecCccccHHHHHHHHHHhCCCeEee
Confidence 457899999999999999988 88888877
No 143
>COG0040 HisG ATP phosphoribosyltransferase [Amino acid transport and metabolism]
Probab=27.20 E-value=49 Score=21.47 Aligned_cols=21 Identities=29% Similarity=0.368 Sum_probs=16.8
Q ss_pred cCCeEecccCccccccceeec
Q psy2847 25 LDIAICEVFGMSECAGAHTVS 45 (83)
Q Consensus 25 ~~~~~~~~yG~tE~~~~~~~~ 45 (83)
...+++..+|++|..+...+.
T Consensus 136 ~~~~Ii~l~GsvE~aP~~GlA 156 (290)
T COG0040 136 IDVEIIKLSGSVELAPALGLA 156 (290)
T ss_pred ceEEEEEccCcEeeccccCcc
Confidence 457899999999998776553
No 144
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=27.03 E-value=46 Score=15.51 Aligned_cols=17 Identities=12% Similarity=0.091 Sum_probs=13.4
Q ss_pred EEEEecCCCCHHHHHHh
Q psy2847 8 VSLSGAAAISTELKRYF 24 (83)
Q Consensus 8 ~~~~gg~~~~~~~~~~~ 24 (83)
.+-++|.|++.+..+.+
T Consensus 23 wvSf~GrPltdevK~a~ 39 (49)
T PF06543_consen 23 WVSFDGRPLTDEVKEAM 39 (49)
T ss_pred heeeCCeeCCHHHHHHH
Confidence 46689999998877665
No 145
>PRK04031 DNA primase; Provisional
Probab=26.75 E-value=43 Score=22.77 Aligned_cols=48 Identities=21% Similarity=0.315 Sum_probs=25.5
Q ss_pred ecccCccccccceeecCCCCcccCceecCcCCcEEEEECCCCCCcceEEEec
Q psy2847 30 CEVFGMSECAGAHTVSAPDDFKLDGVGRTIPGTQTKIVDPDEEGNGEICLKD 81 (83)
Q Consensus 30 ~~~yG~tE~~~~~~~~~~~~~~~~~~g~p~~~~~~~v~d~~~g~~Gei~~~~ 81 (83)
--.||+||.-..--+.-.+..+.+.+|+ +++.+....+...|+|.+-+
T Consensus 27 GAIFGQTEGLLG~elDLReLQ~~griGR----I~V~i~~~~gks~G~I~IpS 74 (408)
T PRK04031 27 GAIFGQTEGLLGDELDLRELQKTGRIGR----IDVEIRSKGGKSKGEITIPS 74 (408)
T ss_pred eeecccccccccccccHHHHHhcCccee----EEEEEEecCCeEEEEEEecC
Confidence 3468999964332221111145566665 34444444445678887754
No 146
>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A.
Probab=25.75 E-value=79 Score=15.38 Aligned_cols=15 Identities=27% Similarity=0.745 Sum_probs=7.6
Q ss_pred eecCcCCcEEEEECC
Q psy2847 55 VGRTIPGTQTKIVDP 69 (83)
Q Consensus 55 ~g~p~~~~~~~v~d~ 69 (83)
-|.|+++..+.+.+.
T Consensus 10 ~g~pv~~a~V~l~~~ 24 (82)
T PF13620_consen 10 TGQPVPGATVTLTDQ 24 (82)
T ss_dssp TSCBHTT-EEEET--
T ss_pred CCCCcCCEEEEEEEe
Confidence 456666666666653
No 147
>PF09866 DUF2093: Uncharacterized protein conserved in bacteria (DUF2093); InterPro: IPR018661 This family of various hypothetical prokaryotic proteins has no known function.
Probab=23.07 E-value=93 Score=14.07 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=18.6
Q ss_pred EEEEEecCCCCHHHHHHhcCCeEecccCccc
Q psy2847 7 RVSLSGAAAISTELKRYFLDIAICEVFGMSE 37 (83)
Q Consensus 7 r~~~~gg~~~~~~~~~~~~~~~~~~~yG~tE 37 (83)
-.+...|.+++.+.++.| ++..-+.|...|
T Consensus 8 V~CAVTg~~IpLd~LrYW-sv~~QEaYa~~~ 37 (42)
T PF09866_consen 8 VRCAVTGQPIPLDELRYW-SVDRQEAYASAE 37 (42)
T ss_pred EEEEeeCCcccHHHhccC-ChhhhhcccCHH
Confidence 345667889998888776 333335555444
No 148
>PF01634 HisG: ATP phosphoribosyltransferase; InterPro: IPR013820 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. ATP phosphoribosyltransferase is found in two distinct forms: a long form containing two catalytic domains and a C-terminal regulatory domain, and a short form in which the regulatory domain is missing. The long form is catalytically competent, but in organisms with the short form, a histidyl-tRNA synthetase paralogue, HisZ, is required for enzyme activity []. This entry represents the catalytic region of this enzyme. The structures of the long form enzymes from Escherichia coli (P60757 from SWISSPROT) and Mycobacterium tuberculosis (P60759 from SWISSPROT) have been determined [, ]. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. The two catalytic domains are linked by a two-stranded beta-sheet and togther form a "periplasmic binding protein fold". A crevice between these domains contains the active site. The C-terminal domain is not directly involved in catalysis but appears to be involved the formation of hexamers, induced by the binding of inhibitors such as histidine to the enzyme, thus regulating activity.; GO: 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1VE4_A 2VD3_B 1NH7_A 1NH8_A 1Z7N_G 1Z7M_E 1O64_A 1O63_A 1USY_F 1Q1K_A ....
Probab=22.89 E-value=33 Score=20.15 Aligned_cols=19 Identities=21% Similarity=0.275 Sum_probs=12.5
Q ss_pred cCCeEecccCcccccccee
Q psy2847 25 LDIAICEVFGMSECAGAHT 43 (83)
Q Consensus 25 ~~~~~~~~yG~tE~~~~~~ 43 (83)
.+..++..+|++|..+...
T Consensus 87 ~~~~ii~l~GsvE~ap~~g 105 (163)
T PF01634_consen 87 INVEIIKLSGSVELAPPLG 105 (163)
T ss_dssp -EEEEEE-SS-TTHHHHTT
T ss_pred CcEEEEEccCCccccCCCC
Confidence 3577999999999976543
No 149
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=21.74 E-value=78 Score=18.21 Aligned_cols=23 Identities=17% Similarity=0.144 Sum_probs=17.6
Q ss_pred CCCceEEEEEecCCCCHHHHHHh
Q psy2847 2 GLDRCRVSLSGAAAISTELKRYF 24 (83)
Q Consensus 2 ~l~~lr~~~~gg~~~~~~~~~~~ 24 (83)
++..-|.++.||..+.....+.+
T Consensus 10 ~l~~~~vlVvGGG~va~rka~~L 32 (157)
T PRK06719 10 NLHNKVVVIIGGGKIAYRKASGL 32 (157)
T ss_pred EcCCCEEEEECCCHHHHHHHHHH
Confidence 46677889999998877666665
No 150
>PF07505 Gp37_Gp68: Phage protein Gp37/Gp68; InterPro: IPR011101 This entry is represented by Burkholderia phage phiE125, Gp37. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=21.22 E-value=1.8e+02 Score=18.56 Aligned_cols=33 Identities=12% Similarity=0.294 Sum_probs=23.4
Q ss_pred CCCceEEEEEecC------CCCHHHHHHh------cCCe-EecccC
Q psy2847 2 GLDRCRVSLSGAA------AISTELKRYF------LDIA-ICEVFG 34 (83)
Q Consensus 2 ~l~~lr~~~~gg~------~~~~~~~~~~------~~~~-~~~~yG 34 (83)
++..+..+++||+ |+.++..+.+ .+++ ++..+|
T Consensus 185 ~~~~IdWVIvGGESG~~ARp~~~~Wvr~irdqC~~~gvpFffKQwG 230 (261)
T PF07505_consen 185 DLEGIDWVIVGGESGPGARPMHPDWVRSIRDQCAAAGVPFFFKQWG 230 (261)
T ss_pred cCCCCCEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 3556788999987 7777777777 4665 456666
No 151
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=21.10 E-value=1.3e+02 Score=15.70 Aligned_cols=22 Identities=27% Similarity=0.318 Sum_probs=11.1
Q ss_pred EEEecCCCCHHHHHHh--cCCeEe
Q psy2847 9 SLSGAAAISTELKRYF--LDIAIC 30 (83)
Q Consensus 9 ~~~gg~~~~~~~~~~~--~~~~~~ 30 (83)
++++|.++++++++.. .+.+++
T Consensus 66 Iltg~~~~~~~v~~la~~~~i~vi 89 (105)
T PF07085_consen 66 ILTGGLEPSEEVLELAKELGIPVI 89 (105)
T ss_dssp EEETT----HHHHHHHHHHT-EEE
T ss_pred EEeCCCCCCHHHHHHHHHCCCEEE
Confidence 4556788888888777 566644
No 152
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=21.01 E-value=1.6e+02 Score=16.46 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=26.9
Q ss_pred CceEEEEEecCCCCHHHHHHh--cCCeEecccCcccc
Q psy2847 4 DRCRVSLSGAAAISTELKRYF--LDIAICEVFGMSEC 38 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~--~~~~~~~~yG~tE~ 38 (83)
+.+|..+.|...+-..+.+.| .+..+..+|.-+..
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~ 45 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPA 45 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcc
Confidence 468999999999999998888 67788888887764
No 153
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=20.52 E-value=39 Score=19.27 Aligned_cols=35 Identities=9% Similarity=0.020 Sum_probs=23.6
Q ss_pred CceEEEEEecCCCCHHHHHHh----cCCeEecccCcccc
Q psy2847 4 DRCRVSLSGAAAISTELKRYF----LDIAICEVFGMSEC 38 (83)
Q Consensus 4 ~~lr~~~~gg~~~~~~~~~~~----~~~~~~~~yG~tE~ 38 (83)
+....++..|..+-..+++++ ......-.||+|=.
T Consensus 61 ~~aD~viiTGsTlvN~Ti~~iL~~~~~~~~vil~GpS~~ 99 (147)
T PF04016_consen 61 PWADVVIITGSTLVNGTIDDILELARNAREVILYGPSAP 99 (147)
T ss_dssp GG-SEEEEECHHCCTTTHHHHHHHTTTSSEEEEESCCGG
T ss_pred ccCCEEEEEeeeeecCCHHHHHHhCccCCeEEEEecCch
Confidence 445577888887877777777 33456678888743
Done!