BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2848
(86 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P57102|HAND2_DANRE Heart- and neural crest derivatives-expressed protein 2 OS=Danio
rerio GN=hand2 PE=2 SV=1
Length = 208
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 87 RTVKRRPTANRKERRRTQSINSAFAELRECIPNV 120
>sp|Q90690|HAND2_CHICK Heart- and neural crest derivatives-expressed protein 2 OS=Gallus
gallus GN=HAND2 PE=2 SV=1
Length = 216
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 97 VKRRGTANRKERRRTQSINSAFAELRECIPNV 128
>sp|P61295|HAND2_RAT Heart- and neural crest derivatives-expressed protein 2 OS=Rattus
norvegicus GN=Hand2 PE=2 SV=1
Length = 217
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 98 VKRRGTANRKERRRTQSINSAFAELRECIPNV 129
>sp|Q61039|HAND2_MOUSE Heart- and neural crest derivatives-expressed protein 2 OS=Mus
musculus GN=Hand2 PE=1 SV=3
Length = 217
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 98 VKRRGTANRKERRRTQSINSAFAELRECIPNV 129
>sp|P61296|HAND2_HUMAN Heart- and neural crest derivatives-expressed protein 2 OS=Homo
sapiens GN=HAND2 PE=1 SV=1
Length = 217
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 98 VKRRGTANRKERRRTQSINSAFAELRECIPNV 129
>sp|P57101|HAND2_XENLA Heart- and neural crest derivatives-expressed protein 2 OS=Xenopus
laevis GN=hand2 PE=2 SV=1
Length = 210
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRT SIN+AF++LRECIPN+
Sbjct: 89 RPVKRRGTANRKERRRTISINSAFAELRECIPNV 122
>sp|P97832|HAND1_RAT Heart- and neural crest derivatives-expressed protein 1 OS=Rattus
norvegicus GN=Hand1 PE=2 SV=2
Length = 216
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 26/94 (27%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI-------------LETDDIISIDD-- 49
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+ L T I + D
Sbjct: 91 RLPRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 150
Query: 50 -----------FKADLSNHSSHRKNKSQYDSPSE 72
FKA+L R++K + +SP +
Sbjct: 151 AKDAQAGDPEAFKAELKKTDGGRESKRKRESPQQ 184
>sp|Q64279|HAND1_MOUSE Heart- and neural crest derivatives-expressed protein 1 OS=Mus
musculus GN=Hand1 PE=1 SV=1
Length = 216
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 26/97 (26%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI-------------LETDDIISIDD-- 49
R+ KR+ + KKERRRT+SIN+AF++LRECIPN+ L T I + D
Sbjct: 91 RLPKRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 150
Query: 50 -----------FKADLSNHSSHRKNKSQYDSPSEISS 75
FKA+L R++K + + P + S
Sbjct: 151 AKDAQAGDPEAFKAELKKTDGGRESKRKRELPQQPES 187
>sp|Q28555|HAND1_SHEEP Heart- and neural crest derivatives-expressed protein 1 OS=Ovis
aries GN=HAND1 PE=2 SV=1
Length = 204
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 97 RLGRRKGSGPKKERRRTESINSAFAELRECIPNV 130
>sp|Q0VCE2|HAND1_BOVIN Heart- and neural crest derivatives-expressed protein 1 OS=Bos
taurus GN=HAND1 PE=2 SV=1
Length = 218
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 94 RLGRRKGSGPKKERRRTESINSAFAELRECIPNV 127
>sp|O96004|HAND1_HUMAN Heart- and neural crest derivatives-expressed protein 1 OS=Homo
sapiens GN=HAND1 PE=2 SV=1
Length = 215
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 91 RLGRRKGSGPKKERRRTESINSAFAELRECIPNV 124
>sp|P57100|HAND1_RABIT Heart- and neural crest derivatives-expressed protein 1
OS=Oryctolagus cuniculus GN=HAND1 PE=2 SV=1
Length = 215
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 91 RLGRRKGSGPKKERRRTESINSAFAELRECIPNV 124
>sp|O73615|HAND1_XENLA Heart- and neural crest derivatives-expressed protein 1 OS=Xenopus
laevis GN=hand1 PE=2 SV=1
Length = 197
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
++ +R+ KKERRRT+SIN+AF++LRECIPN+
Sbjct: 77 KLGRRKGAPPKKERRRTESINSAFAELRECIPNV 110
>sp|Q90691|HAND1_CHICK Heart- and neural crest derivatives-expressed protein 1 OS=Gallus
gallus GN=HAND1 PE=2 SV=1
Length = 202
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Query: 5 RVVKRRNTAN-KKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ KKERRRT+SIN+AF++LRECIPN+
Sbjct: 79 RLGRRKGVGGPKKERRRTESINSAFAELRECIPNV 113
>sp|P41894|DEI_DROME Helix-loop-helix protein delilah OS=Drosophila melanogaster GN=dei
PE=1 SV=3
Length = 384
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDD 43
RR TAN +ER R + IN AF LR C+P ++ +D
Sbjct: 95 RRKTANARERTRMREINTAFETLRHCVPEAIKGED 129
>sp|Q60539|TCF15_MESAU Transcription factor 15 OS=Mesocricetus auratus GN=TCF15 PE=2
SV=1
Length = 195
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPN 37
P++ VV++R AN +ER RTQS+N AF+ LR IP
Sbjct: 65 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIPT 99
>sp|Q60756|TCF15_MOUSE Transcription factor 15 OS=Mus musculus GN=Tcf15 PE=1 SV=2
Length = 195
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPN 37
P++ VV++R AN +ER RTQS+N AF+ LR IP
Sbjct: 65 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIPT 99
>sp|O13126|ATO7B_XENLA Protein atonal homolog 7-B OS=Xenopus laevis GN=atoh7-b PE=1 SV=1
Length = 138
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLS 55
KRR AN +ERRR Q +N AF LR+ +P E + + + LS
Sbjct: 32 TKRRLAANARERRRMQGLNTAFDSLRKVVPQWGEDKKLSKYETLQMALS 80
>sp|P79782|TCF15_CHICK Transcription factor 15 OS=Gallus gallus GN=TCF15 PE=2 SV=2
Length = 183
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPN 37
P++ +VK+R AN +ER RTQS+N AF+ LR IP
Sbjct: 56 PMV-MVKQRQAANARERDRTQSVNTAFTALRTLIPT 90
>sp|O13125|ATO7A_XENLA Protein atonal homolog 7-A OS=Xenopus laevis GN=atoh7-a PE=1 SV=1
Length = 138
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLS 55
KRR AN +ERRR Q +N AF LR+ +P E + + + LS
Sbjct: 32 TKRRLAANARERRRMQGLNTAFDSLRKVVPQWGEDKQLSKYETLQMALS 80
>sp|P13903|TWIST_XENLA Twist-related protein OS=Xenopus laevis GN=twist1 PE=2 SV=1
Length = 166
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AFS LR+ IP L +D + I K
Sbjct: 73 QRVMANVRERQRTQSLNEAFSSLRKIIPT-LPSDKLSKIQTLK 114
>sp|P26687|TWST1_MOUSE Twist-related protein 1 OS=Mus musculus GN=Twist1 PE=1 SV=1
Length = 206
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 113 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 154
>sp|Q8MIB9|TWST1_PONPY Twist-related protein 1 OS=Pongo pygmaeus GN=TWIST1 PE=3 SV=1
Length = 203
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 110 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 151
>sp|Q7JGP2|TWST1_MACTO Twist-related protein 1 OS=Macaca tonkeana GN=TWIST1 PE=3 SV=1
Length = 201
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 108 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 149
>sp|Q15672|TWST1_HUMAN Twist-related protein 1 OS=Homo sapiens GN=TWIST1 PE=1 SV=1
Length = 202
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 109 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 150
>sp|Q8MIH8|TWST1_CEBCA Twist-related protein 1 OS=Cebus capucinus GN=TWIST1 PE=3 SV=1
Length = 207
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 114 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 155
>sp|Q8MID5|TWST1_MICMU Twist-related protein 1 OS=Microcebus murinus GN=TWIST1 PE=3 SV=1
Length = 199
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 106 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 147
>sp|Q8MIF3|TWST1_EULFU Twist-related protein 1 OS=Eulemur fulvus fulvus GN=TWIST1 PE=3
SV=1
Length = 198
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 105 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 146
>sp|Q8MIB5|TWST1_SAGOE Twist-related protein 1 OS=Saguinus oedipus GN=TWIST1 PE=3 SV=1
Length = 203
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 110 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 151
>sp|Q8MIE7|TWST1_NOMCO Twist-related protein 1 OS=Nomascus concolor GN=TWIST1 PE=3 SV=1
Length = 204
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 111 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 152
>sp|O57598|ATOH7_CHICK Protein atonal homolog 7 OS=Gallus gallus GN=ATOH7 PE=1 SV=2
Length = 151
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 6 VVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLS 55
KRR AN +ERRR Q +N AF LR+ +P + + + + LS
Sbjct: 37 AAKRRLAANARERRRMQGLNTAFDRLRKVVPQWGQDKKLSKYETLQMALS 86
>sp|Q9QYC3|BHA15_MOUSE Class A basic helix-loop-helix protein 15 OS=Mus musculus
GN=Bhlha15 PE=2 SV=1
Length = 197
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
V+RR +N++ER+R +NNAF LRE IP++
Sbjct: 71 VQRRLESNERERQRMHKLNNAFQALREVIPHV 102
>sp|P70562|BHA15_RAT Class A basic helix-loop-helix protein 15 OS=Rattus norvegicus
GN=Bhlha15 PE=1 SV=1
Length = 197
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDF 50
V+RR +N++ER+R +NNAF LRE IP++ + I+
Sbjct: 71 VQRRLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIETL 114
>sp|O96642|TWIST_BRABE Twist-related protein OS=Branchiostoma belcheri GN=TWIST PE=2 SV=1
Length = 196
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AFS LR+ IP L +D + I K
Sbjct: 96 QRVLANVRERQRTQSLNEAFSSLRKIIPT-LPSDKLSKIQTLK 137
>sp|Q9Y0A7|AMOS_DROME Basic helix-loop-helix transcription factor amos OS=Drosophila
melanogaster GN=amos PE=1 SV=2
Length = 198
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 8 KRRNTANKKERRRTQSINNAFSDLRECIPNI 38
KRR AN +ERRR S+N+AF LR+ +P++
Sbjct: 138 KRRLAANARERRRMNSLNDAFDKLRDVVPSL 168
>sp|Q9D030|TWST2_MOUSE Twist-related protein 2 OS=Mus musculus GN=Twist2 PE=1 SV=1
Length = 160
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>sp|P97831|TWST2_RAT Twist-related protein 2 OS=Rattus norvegicus GN=Twist2 PE=2 SV=2
Length = 160
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>sp|Q8WVJ9|TWST2_HUMAN Twist-related protein 2 OS=Homo sapiens GN=TWIST2 PE=1 SV=1
Length = 160
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>sp|P48987|ATO_DROME Protein atonal OS=Drosophila melanogaster GN=ato PE=2 SV=2
Length = 312
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIP 36
P+++ KRR AN +ERRR Q++N AF LR+ +P
Sbjct: 250 PVVKR-KRRLAANARERRRMQNLNQAFDRLRQYLP 283
>sp|Q7RTS1|BHA15_HUMAN Class A basic helix-loop-helix protein 15 OS=Homo sapiens
GN=BHLHA15 PE=1 SV=1
Length = 189
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDF 50
++RR +N++ER+R +NNAF LRE IP++ + I+
Sbjct: 74 IQRRLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIETL 117
>sp|Q7ZSX3|PTF1A_DANRE Pancreas transcription factor 1 subunit alpha OS=Danio rerio
GN=ptf1a PE=2 SV=1
Length = 265
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 4 IRVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
+ + + R AN +ERRR QSIN+AF LR IP +
Sbjct: 111 VEMQQLRQAANVRERRRMQSINDAFEGLRSHIPTL 145
>sp|Q8AW52|ATOH7_DANRE Protein atonal homolog 7 OS=Danio rerio GN=atoh7 PE=1 SV=1
Length = 134
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 6 VVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLS 55
++RR AN +ER+R Q +N AF LR+ +P + + + + LS
Sbjct: 26 AMRRRMAANARERKRMQGLNTAFDRLRKVVPQWGQDKKLSKYETLQMALS 75
>sp|Q4ZHW1|PTF1A_XENLA Pancreas transcription factor 1 subunit alpha OS=Xenopus laevis
GN=ptf1a PE=2 SV=1
Length = 270
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 10 RNTANKKERRRTQSINNAFSDLRECIPNI 38
R AN +ERRR QSIN+AF LR IP +
Sbjct: 121 RQAANVRERRRMQSINDAFEGLRSHIPTL 149
>sp|Q8I1G0|TWIST_DROER Protein twist OS=Drosophila erecta GN=twi PE=3 SV=1
Length = 490
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N+AF L++ IP L +D + I K
Sbjct: 363 QRVMANVRERQRTQSLNDAFKSLQQIIPT-LPSDKLSKIQTLK 404
>sp|Q10574|LIN32_CAEEL Protein lin-32 OS=Caenorhabditis elegans GN=lin-32 PE=1 SV=2
Length = 142
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNI 38
RR+ AN++ERRR ++N A+ +LRE +P I
Sbjct: 73 RRSAANERERRRMNTLNVAYDELREVLPEI 102
>sp|P10627|TWIST_DROME Protein twist OS=Drosophila melanogaster GN=twi PE=1 SV=2
Length = 490
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N+AF L++ IP L +D + I K
Sbjct: 363 QRVMANVRERQRTQSLNDAFKSLQQIIPT-LPSDKLSKIQTLK 404
>sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis elegans GN=hlh-8 PE=1
SV=2
Length = 178
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 15/67 (22%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNI------------LETDDIISIDDFK--- 51
V++R AN++ER+RT+ +N+AF+ LR+ IP++ + TD I +D+ +
Sbjct: 19 VQQRACANRRERQRTKELNDAFTLLRKLIPSMPSDKMSKIHTLRIATDYISFLDEMQKNG 78
Query: 52 ADLSNHS 58
L HS
Sbjct: 79 CKLYGHS 85
>sp|Q64305|PTF1A_RAT Pancreas transcription factor 1 subunit alpha OS=Rattus norvegicus
GN=Ptf1a PE=1 SV=1
Length = 326
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 10 RNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
R AN +ERRR QSIN+AF LR IP + + +D +
Sbjct: 164 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLR 205
>sp|Q9TX44|TWIST_DROVI Protein twist OS=Drosophila virilis GN=twi PE=3 SV=2
Length = 519
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N+AF L++ IP L +D + I K
Sbjct: 391 QRVMANVRERQRTQSLNDAFKALQQIIPT-LPSDKLSKIQTLK 432
>sp|Q9QX98|PTF1A_MOUSE Pancreas transcription factor 1 subunit alpha OS=Mus musculus
GN=Ptf1a PE=1 SV=1
Length = 324
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 10 RNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
R AN +ERRR QSIN+AF LR IP + + +D +
Sbjct: 162 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLR 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,634,984
Number of Sequences: 539616
Number of extensions: 947441
Number of successful extensions: 3097
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2931
Number of HSP's gapped (non-prelim): 193
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)