Your job contains 1 sequence.
>psy2848
LPIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSH
RKNKSQYDSPSEISSNQSSQYVMDPS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2848
(86 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032209 - symbol:Hand "Hand" species:7227 "Drosoph... 150 9.4e-11 1
UNIPROTKB|E1C225 - symbol:E1C225 "Uncharacterized protein... 145 3.2e-10 1
UNIPROTKB|F1NPU0 - symbol:F1NPU0 "Uncharacterized protein... 145 3.2e-10 1
UNIPROTKB|F1P1U1 - symbol:F1P1U1 "Uncharacterized protein... 145 3.2e-10 1
UNIPROTKB|Q90690 - symbol:HAND2 "Heart- and neural crest ... 145 3.2e-10 1
UNIPROTKB|F1MLT3 - symbol:LOC781874 "Uncharacterized prot... 145 3.2e-10 1
UNIPROTKB|F1PX30 - symbol:HAND2 "Uncharacterized protein"... 145 3.2e-10 1
UNIPROTKB|P61296 - symbol:HAND2 "Heart- and neural crest ... 145 3.2e-10 1
UNIPROTKB|F1RJ02 - symbol:HAND2 "Uncharacterized protein"... 145 3.2e-10 1
MGI|MGI:103580 - symbol:Hand2 "heart and neural crest der... 145 3.2e-10 1
RGD|621207 - symbol:Hand2 "heart and neural crest derivat... 145 3.2e-10 1
UNIPROTKB|P61295 - symbol:Hand2 "Heart- and neural crest ... 145 3.2e-10 1
ZFIN|ZDB-GENE-000511-1 - symbol:hand2 "heart and neural c... 145 3.2e-10 1
MGI|MGI:103577 - symbol:Hand1 "heart and neural crest der... 123 2.3e-09 2
RGD|621206 - symbol:Hand1 "heart and neural crest derivat... 120 5.5e-09 2
UNIPROTKB|F1RQC4 - symbol:HAND1 "Uncharacterized protein"... 119 6.7e-09 2
UNIPROTKB|O96004 - symbol:HAND1 "Heart- and neural crest ... 119 6.9e-09 2
UNIPROTKB|Q0VCE2 - symbol:HAND1 "Heart- and neural crest ... 119 7.7e-09 2
UNIPROTKB|E2RPA0 - symbol:HAND1 "Uncharacterized protein"... 119 7.7e-09 2
UNIPROTKB|Q90691 - symbol:HAND1 "Heart- and neural crest ... 111 1.9e-06 1
ZFIN|ZDB-GENE-980605-20 - symbol:par1 "paraxis" species:7... 102 1.5e-05 1
ZFIN|ZDB-GENE-070803-3 - symbol:bhlha15 "basic helix-loop... 83 2.3e-05 2
ZFIN|ZDB-GENE-100922-228 - symbol:si:ch211-251p5.3 "si:ch... 99 4.6e-05 1
MGI|MGI:104664 - symbol:Tcf15 "transcription factor 15" s... 95 0.00013 1
RGD|1308464 - symbol:Tcf15 "transcription factor 15" spec... 95 0.00013 1
UNIPROTKB|A2VE98 - symbol:TCF15 "Transcription factor 15 ... 95 0.00013 1
UNIPROTKB|F1S863 - symbol:TCF15 "Uncharacterized protein"... 95 0.00013 1
UNIPROTKB|E2RI49 - symbol:TCF15 "Uncharacterized protein"... 95 0.00014 1
UNIPROTKB|A7Z095 - symbol:TWIST3 "Twist3" species:9031 "G... 92 0.00014 1
UNIPROTKB|P13903 - symbol:twist1 "Twist-related protein" ... 92 0.00016 1
UNIPROTKB|Q12870 - symbol:TCF15 "Transcription factor 15"... 94 0.00017 1
UNIPROTKB|P79782 - symbol:TCF15 "Transcription factor 15"... 93 0.00017 1
UNIPROTKB|O96642 - symbol:TWIST "Twist-related protein" s... 92 0.00028 1
ZFIN|ZDB-GENE-980526-235 - symbol:twist2 "twist2" species... 89 0.00034 1
FB|FBgn0263118 - symbol:tx "taxi" species:7227 "Drosophil... 96 0.00038 1
ZFIN|ZDB-GENE-000210-6 - symbol:twist1a "twist1a" species... 89 0.00041 1
UNIPROTKB|H7BY00 - symbol:TWIST1 "Twist-related protein 1... 87 0.00045 1
UNIPROTKB|F1SEI1 - symbol:TWIST1 "Uncharacterized protein... 87 0.00045 1
RGD|621455 - symbol:Twist1 "twist basic helix-loop-helix ... 87 0.00045 1
ZFIN|ZDB-GENE-060503-414 - symbol:scxa "scleraxis homolog... 90 0.00053 1
UNIPROTKB|Q9YH69 - symbol:cdermo-1 "Dermo protein" specie... 87 0.00056 1
UNIPROTKB|A4IFM6 - symbol:TWIST2 "Uncharacterized protein... 87 0.00056 1
UNIPROTKB|E2RQT1 - symbol:TWIST2 "Uncharacterized protein... 87 0.00056 1
UNIPROTKB|Q8WVJ9 - symbol:TWIST2 "Twist-related protein 2... 87 0.00056 1
UNIPROTKB|F2Z5R9 - symbol:TWIST2 "Uncharacterized protein... 87 0.00056 1
MGI|MGI:104685 - symbol:Twist2 "twist basic helix-loop-he... 87 0.00056 1
RGD|621286 - symbol:Twist2 "twist basic helix-loop-helix ... 87 0.00056 1
UNIPROTKB|O13125 - symbol:atoh7-a "Protein atonal homolog... 86 0.00057 1
ZFIN|ZDB-GENE-050208-498 - symbol:si:ch211-246m6.4 "si:ch... 89 0.00059 1
FB|FBgn0037475 - symbol:Fer1 "48 related 1" species:7227 ... 91 0.00064 1
ZFIN|ZDB-GENE-000210-7 - symbol:twist3 "twist3" species:7... 89 0.00064 1
ZFIN|ZDB-GENE-050417-357 - symbol:twist1b "twist1b" speci... 87 0.00068 1
UNIPROTKB|P59101 - symbol:SCX "Basic helix-loop-helix tra... 88 0.00070 1
UNIPROTKB|A7VJR9 - symbol:Scx "Scleraxis" species:9796 "E... 88 0.00084 1
UNIPROTKB|Q7RTU7 - symbol:SCXA "Basic helix-loop-helix tr... 88 0.00085 1
MGI|MGI:102934 - symbol:Scx "scleraxis" species:10090 "Mu... 88 0.00091 1
WB|WBGene00003018 - symbol:lin-32 species:6239 "Caenorhab... 84 0.00093 1
RGD|1588254 - symbol:Scx "scleraxis" species:10116 "Rattu... 88 0.00093 1
ZFIN|ZDB-GENE-990415-17 - symbol:atoh1a "atonal homolog 1... 79 0.00095 2
>FB|FBgn0032209 [details] [associations]
symbol:Hand "Hand" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0007508 "larval heart development" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0043066
EMBL:AE014134 GO:GO:0001077 GO:GO:0030097 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0032968 GO:GO:0035050 eggNOG:NOG259520
KO:K09071 GO:GO:0007508 GeneTree:ENSGT00690000101840 EMBL:BT126289
RefSeq:NP_609370.2 UniGene:Dm.26779 SMR:Q9VL05 STRING:Q9VL05
EnsemblMetazoa:FBtr0080073 GeneID:34379 KEGG:dme:Dmel_CG18144
UCSC:CG18144-RA CTD:34379 FlyBase:FBgn0032209 InParanoid:Q9VL05
OMA:TIKKRNT OrthoDB:EOG4866VJ GenomeRNAi:34379 NextBio:788206
Uniprot:Q9VL05
Length = 174
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIIS 46
R+VK+RNTANKKERRRTQSINNAFS LRE IPN+ TD +S
Sbjct: 55 RIVKKRNTANKKERRRTQSINNAFSYLREKIPNV-PTDTKLS 95
>UNIPROTKB|E1C225 [details] [associations]
symbol:E1C225 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048935 "peripheral nervous system neuron development"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0060536 "cartilage morphogenesis" evidence=IEA] [GO:0060982
"coronary artery morphogenesis" evidence=IEA] [GO:0061032 "visceral
serous pericardium development" evidence=IEA] [GO:0061325 "cell
proliferation involved in outflow tract morphogenesis"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA] [GO:2000763 "positive regulation of
transcription from RNA polymerase II promoter involved in
norepinephrine biosynthetic process" evidence=IEA] [GO:2000764
"positive regulation of semaphorin-plexin signaling pathway
involved in outflow tract morphogenesis" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001967 "suckling
behavior" evidence=IEA] [GO:0003219 "cardiac right ventricle
formation" evidence=IEA] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=IEA]
[GO:0003266 "regulation of secondary heart field cardioblast
proliferation" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0010463
"mesenchymal cell proliferation" evidence=IEA] [GO:0010667
"negative regulation of cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043392 "negative regulation of DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043586 "tongue development" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0006915 GO:GO:0005667 GO:GO:0001077 GO:GO:0000790
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0000977
GO:GO:0045668 GO:GO:0070888 GO:GO:0003680 GO:GO:0043392
GO:GO:0003266 GO:GO:0010463 GO:GO:2000679
GeneTree:ENSGT00690000101643 OMA:ATRCGHE GO:GO:0010667
GO:GO:2000764 GO:GO:2000763 EMBL:AADN02008958 EMBL:AADN02008959
EMBL:AADN02008960 EMBL:AADN02008961 IPI:IPI00821362
Ensembl:ENSGALT00000038201 ArrayExpress:E1C225 Uniprot:E1C225
Length = 216
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 95 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 128
>UNIPROTKB|F1NPU0 [details] [associations]
symbol:F1NPU0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101643 IPI:IPI00603751 EMBL:AADN02008958
EMBL:AADN02008959 EMBL:AADN02008960 EMBL:AADN02008961
Ensembl:ENSGALT00000017495 ArrayExpress:F1NPU0 Uniprot:F1NPU0
Length = 214
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 93 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 126
>UNIPROTKB|F1P1U1 [details] [associations]
symbol:F1P1U1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101643 EMBL:AADN02008958 EMBL:AADN02008959
EMBL:AADN02008960 EMBL:AADN02008961 IPI:IPI00820631
Ensembl:ENSGALT00000038199 ArrayExpress:F1P1U1 Uniprot:F1P1U1
Length = 173
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 50 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 83
>UNIPROTKB|Q90690 [details] [associations]
symbol:HAND2 "Heart- and neural crest derivatives-expressed
protein 2" species:9031 "Gallus gallus" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG259520
HOGENOM:HOG000232082 HOVERGEN:HBG051880 KO:K09071 EMBL:U40040
IPI:IPI00603751 RefSeq:NP_990297.1 UniGene:Gga.479
ProteinModelPortal:Q90690 STRING:Q90690 GeneID:395813
KEGG:gga:395813 CTD:9464 NextBio:20815881 Uniprot:Q90690
Length = 216
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 95 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 128
>UNIPROTKB|F1MLT3 [details] [associations]
symbol:LOC781874 "Uncharacterized protein" species:9913
"Bos taurus" [GO:2000764 "positive regulation of semaphorin-plexin
signaling pathway involved in outflow tract morphogenesis"
evidence=IEA] [GO:2000763 "positive regulation of transcription
from RNA polymerase II promoter involved in norepinephrine
biosynthetic process" evidence=IEA] [GO:2000679 "positive
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0061325
"cell proliferation involved in outflow tract morphogenesis"
evidence=IEA] [GO:0061032 "visceral serous pericardium development"
evidence=IEA] [GO:0060982 "coronary artery morphogenesis"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0048485
"sympathetic nervous system development" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0043586 "tongue development" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043392 "negative regulation of
DNA binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0010667 "negative regulation of cardiac
muscle cell apoptotic process" evidence=IEA] [GO:0010463
"mesenchymal cell proliferation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007512 "adult
heart development" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003680 "AT DNA binding" evidence=IEA]
[GO:0003266 "regulation of secondary heart field cardioblast
proliferation" evidence=IEA] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0001967 "suckling behavior" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0006915 GO:GO:0001701 GO:GO:0001967
GO:GO:0005667 GO:GO:0001077 GO:GO:0000790 GO:GO:0007512
GO:GO:0042475 GO:GO:0048538 GO:GO:0043433 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0060021 GO:GO:0042733
GO:GO:0048485 GO:GO:0000977 GO:GO:0045668 GO:GO:0070888
GO:GO:0003680 GO:GO:0048935 GO:GO:0043392 GO:GO:0060536
GO:GO:0003266 GO:GO:0060982 GO:GO:0061032 GO:GO:0043586
GO:GO:0010463 GO:GO:2000679 GeneTree:ENSGT00690000101643 KO:K09071
GO:GO:0003219 OMA:ATRCGHE GO:GO:0003253 GO:GO:0061325 GO:GO:0010667
GO:GO:2000764 GO:GO:2000763 EMBL:DAAA02021871 IPI:IPI00923949
RefSeq:XP_003586406.1 Ensembl:ENSBTAT00000061276 GeneID:781874
KEGG:bta:781874 Uniprot:F1MLT3
Length = 191
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 70 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 103
>UNIPROTKB|F1PX30 [details] [associations]
symbol:HAND2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101643 OMA:ATRCGHE EMBL:AAEX03014311
Ensembl:ENSCAFT00000012546 Uniprot:F1PX30
Length = 222
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 101 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 134
>UNIPROTKB|P61296 [details] [associations]
symbol:HAND2 "Heart- and neural crest derivatives-expressed
protein 2" species:9606 "Homo sapiens" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0003253 "cardiac neural crest cell migration involved in
outflow tract morphogenesis" evidence=IEA] [GO:0010463 "mesenchymal
cell proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043392 "negative regulation of
DNA binding" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IEA]
[GO:0060982 "coronary artery morphogenesis" evidence=IEA]
[GO:0061032 "visceral serous pericardium development" evidence=IEA]
[GO:0061325 "cell proliferation involved in outflow tract
morphogenesis" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=IDA] [GO:0007507 "heart development" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0070888 "E-box binding" evidence=ISS;IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0003357 "noradrenergic neuron differentiation" evidence=NAS]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0061309 "cardiac neural crest cell
development involved in outflow tract morphogenesis" evidence=ISS]
[GO:0048538 "thymus development" evidence=ISS] [GO:0010667
"negative regulation of cardiac muscle cell apoptotic process"
evidence=ISS] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=ISS] [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0033613 "activating transcription
factor binding" evidence=ISS] [GO:0001947 "heart looping"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042803 "protein
homodimerization activity" evidence=ISS] [GO:0001701 "in utero
embryonic development" evidence=ISS] [GO:0003007 "heart
morphogenesis" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0014032 "neural crest cell development"
evidence=ISS] [GO:0007512 "adult heart development" evidence=IEP]
[GO:2000763 "positive regulation of transcription from RNA
polymerase II promoter involved in norepinephrine biosynthetic
process" evidence=ISS] [GO:2000764 "positive regulation of
semaphorin-plexin signaling pathway involved in outflow tract
morphogenesis" evidence=ISS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0006915 GO:GO:0042803
GO:GO:0001701 GO:GO:0001967 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0000790 GO:GO:0003713 EMBL:CH471056
GO:GO:0007512 GO:GO:0042475 GO:GO:0048538 GO:GO:0043433
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0060021
GO:GO:0042733 GO:GO:0048485 GO:GO:0000977 GO:GO:0045668
GO:GO:0070888 GO:GO:0003680 GO:GO:0048935 GO:GO:0043392
GO:GO:0060536 GO:GO:0003266 GO:GO:0060982 GO:GO:0061032
GO:GO:0043586 GO:GO:0010463 GO:GO:2000679 GO:GO:0033613
eggNOG:NOG259520 HOGENOM:HOG000232082 HOVERGEN:HBG051880 KO:K09071
OrthoDB:EOG4FTW1T GO:GO:0003219 CTD:9464 EMBL:AF087940
EMBL:AF087941 EMBL:FJ226608 IPI:IPI00029953 RefSeq:NP_068808.1
UniGene:Hs.388245 ProteinModelPortal:P61296 SMR:P61296
STRING:P61296 PhosphoSite:P61296 DMDM:47117699 PaxDb:P61296
PRIDE:P61296 Ensembl:ENST00000359562 GeneID:9464 KEGG:hsa:9464
UCSC:uc003ith.1 GeneCards:GC04M174447 HGNC:HGNC:4808 HPA:CAB025576
MIM:602407 neXtProt:NX_P61296 PharmGKB:PA29184 InParanoid:P61296
OMA:ATRCGHE PhylomeDB:P61296 GenomeRNAi:9464 NextBio:35460
ArrayExpress:P61296 Bgee:P61296 CleanEx:HS_HAND2
Genevestigator:P61296 GermOnline:ENSG00000164107 GO:GO:0061309
GO:GO:0003253 GO:GO:0061325 GO:GO:0010667 GO:GO:0003357
GO:GO:2000764 GO:GO:2000763 Uniprot:P61296
Length = 217
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 96 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 129
>UNIPROTKB|F1RJ02 [details] [associations]
symbol:HAND2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000764 "positive regulation of semaphorin-plexin
signaling pathway involved in outflow tract morphogenesis"
evidence=IEA] [GO:2000763 "positive regulation of transcription
from RNA polymerase II promoter involved in norepinephrine
biosynthetic process" evidence=IEA] [GO:2000679 "positive
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0061325
"cell proliferation involved in outflow tract morphogenesis"
evidence=IEA] [GO:0061032 "visceral serous pericardium development"
evidence=IEA] [GO:0060982 "coronary artery morphogenesis"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0048485
"sympathetic nervous system development" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0043586 "tongue development" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043392 "negative regulation of
DNA binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0010667 "negative regulation of cardiac
muscle cell apoptotic process" evidence=IEA] [GO:0010463
"mesenchymal cell proliferation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007512 "adult
heart development" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003680 "AT DNA binding" evidence=IEA]
[GO:0003266 "regulation of secondary heart field cardioblast
proliferation" evidence=IEA] [GO:0003253 "cardiac neural crest cell
migration involved in outflow tract morphogenesis" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0001967 "suckling behavior" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0006915 GO:GO:0001701 GO:GO:0001967
GO:GO:0005667 GO:GO:0001077 GO:GO:0000790 GO:GO:0007512
GO:GO:0042475 GO:GO:0048538 GO:GO:0043433 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0060021 GO:GO:0042733
GO:GO:0048485 GO:GO:0000977 GO:GO:0045668 GO:GO:0070888
GO:GO:0003680 GO:GO:0048935 GO:GO:0043392 GO:GO:0060536
GO:GO:0003266 GO:GO:0060982 GO:GO:0061032 GO:GO:0043586
GO:GO:0010463 GO:GO:2000679 GeneTree:ENSGT00690000101643
GO:GO:0003219 OMA:ATRCGHE GO:GO:0003253 GO:GO:0061325 GO:GO:0010667
GO:GO:2000764 GO:GO:2000763 EMBL:CU468996
Ensembl:ENSSSCT00000010638 Uniprot:F1RJ02
Length = 176
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 55 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 88
>MGI|MGI:103580 [details] [associations]
symbol:Hand2 "heart and neural crest derivatives expressed
transcript 2" species:10090 "Mus musculus" [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=ISO] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001947 "heart looping"
evidence=IMP] [GO:0001967 "suckling behavior" evidence=IMP]
[GO:0003007 "heart morphogenesis" evidence=IMP] [GO:0003219
"cardiac right ventricle formation" evidence=IMP] [GO:0003253
"cardiac neural crest cell migration involved in outflow tract
morphogenesis" evidence=IMP] [GO:0003266 "regulation of secondary
heart field cardioblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IGI] [GO:0007512 "adult heart development" evidence=IMP]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0010463 "mesenchymal cell proliferation" evidence=IMP]
[GO:0010667 "negative regulation of cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043392 "negative regulation of DNA binding" evidence=IDA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IGI] [GO:0043586 "tongue
development" evidence=IMP] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048485
"sympathetic nervous system development" evidence=IDA] [GO:0048538
"thymus development" evidence=IMP] [GO:0048935 "peripheral nervous
system neuron development" evidence=IDA] [GO:0060021 "palate
development" evidence=IMP] [GO:0060485 "mesenchyme development"
evidence=IGI] [GO:0060536 "cartilage morphogenesis" evidence=IGI]
[GO:0060982 "coronary artery morphogenesis" evidence=IMP]
[GO:0061032 "visceral serous pericardium development" evidence=IMP]
[GO:0061309 "cardiac neural crest cell development involved in
outflow tract morphogenesis" evidence=IMP] [GO:0061325 "cell
proliferation involved in outflow tract morphogenesis"
evidence=IMP] [GO:0061371 "determination of heart left/right
asymmetry" evidence=IMP] [GO:0070888 "E-box binding"
evidence=ISO;IDA] [GO:2000679 "positive regulation of transcription
regulatory region DNA binding" evidence=ISO] [GO:2000763 "positive
regulation of transcription from RNA polymerase II promoter
involved in norepinephrine biosynthetic process" evidence=IMP]
[GO:2000764 "positive regulation of semaphorin-plexin signaling
pathway involved in outflow tract morphogenesis" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:103580 GO:GO:0006915 GO:GO:0043565 GO:GO:0001701
GO:GO:0001967 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0000790 GO:GO:0003713 GO:GO:0007512 GO:GO:0042475
GO:GO:0048538 GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0060021 GO:GO:0042733 GO:GO:0048485
GO:GO:0000977 GO:GO:0045668 GO:GO:0070888 GO:GO:0003680
GO:GO:0048935 GO:GO:0043392 GO:GO:0060536 GO:GO:0003266
GO:GO:0060982 GO:GO:0061032 GO:GO:0043586 GO:GO:0010463
GO:GO:2000679 GO:GO:0033613 eggNOG:NOG259520
GeneTree:ENSGT00690000101643 HOGENOM:HOG000232082
HOVERGEN:HBG051880 KO:K09071 OrthoDB:EOG4FTW1T GO:GO:0003219
CTD:9464 OMA:ATRCGHE GO:GO:0003253 GO:GO:0061325 GO:GO:0010667
GO:GO:2000764 GO:GO:2000763 EMBL:U40039 EMBL:AK035160 EMBL:U43715
IPI:IPI00116995 RefSeq:NP_034532.3 UniGene:Mm.430844
ProteinModelPortal:Q61039 SMR:Q61039 IntAct:Q61039 STRING:Q61039
PhosphoSite:Q61039 PRIDE:Q61039 Ensembl:ENSMUST00000040104
GeneID:15111 KEGG:mmu:15111 UCSC:uc009lss.2 InParanoid:Q61039
ChiTaRS:HAND2 NextBio:287514 Bgee:Q61039 Genevestigator:Q61039
GermOnline:ENSMUSG00000038193 Uniprot:Q61039
Length = 217
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 96 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 129
>RGD|621207 [details] [associations]
symbol:Hand2 "heart and neural crest derivatives expressed 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=ISO] [GO:0001947 "heart looping"
evidence=ISO] [GO:0001967 "suckling behavior" evidence=ISO]
[GO:0003007 "heart morphogenesis" evidence=ISO] [GO:0003219
"cardiac right ventricle formation" evidence=ISO] [GO:0003253
"cardiac neural crest cell migration involved in outflow tract
morphogenesis" evidence=ISO] [GO:0003266 "regulation of secondary
heart field cardioblast proliferation" evidence=ISO] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=ISO] [GO:0003713 "transcription coactivator activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC;ISO;IDA] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=ISO] [GO:0007507 "heart
development" evidence=ISO;IEP] [GO:0007512 "adult heart
development" evidence=ISO] [GO:0008134 "transcription factor
binding" evidence=ISO;IPI] [GO:0010463 "mesenchymal cell
proliferation" evidence=ISO] [GO:0010667 "negative regulation of
cardiac muscle cell apoptotic process" evidence=ISO] [GO:0014032
"neural crest cell development" evidence=ISO] [GO:0019904 "protein
domain specific binding" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IPI] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISO]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043392 "negative regulation of DNA binding" evidence=ISO]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0043586 "tongue
development" evidence=ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048485 "sympathetic
nervous system development" evidence=ISO] [GO:0048538 "thymus
development" evidence=ISO] [GO:0048935 "peripheral nervous system
neuron development" evidence=ISO] [GO:0060021 "palate development"
evidence=ISO] [GO:0060485 "mesenchyme development" evidence=ISO]
[GO:0060536 "cartilage morphogenesis" evidence=ISO] [GO:0060982
"coronary artery morphogenesis" evidence=ISO] [GO:0061032 "visceral
serous pericardium development" evidence=ISO] [GO:0061309 "cardiac
neural crest cell development involved in outflow tract
morphogenesis" evidence=ISO] [GO:0061325 "cell proliferation
involved in outflow tract morphogenesis" evidence=ISO] [GO:0061371
"determination of heart left/right asymmetry" evidence=ISO]
[GO:0070888 "E-box binding" evidence=ISO] [GO:0071300 "cellular
response to retinoic acid" evidence=IEP] [GO:0071407 "cellular
response to organic cyclic compound" evidence=IEP] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] [GO:2000763 "positive regulation of
transcription from RNA polymerase II promoter involved in
norepinephrine biosynthetic process" evidence=ISO] [GO:2000764
"positive regulation of semaphorin-plexin signaling pathway
involved in outflow tract morphogenesis" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:621207 GO:GO:0005634 GO:GO:0019904 GO:GO:0007507 GO:GO:0030154
GO:GO:0003677 GO:GO:0071300 GO:GO:0045944 GO:GO:0006351
GO:GO:0001525 GO:GO:0003713 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071407 eggNOG:NOG259520 HOGENOM:HOG000232082
HOVERGEN:HBG051880 KO:K09071 OrthoDB:EOG4FTW1T CTD:9464 EMBL:Y08138
IPI:IPI00206227 RefSeq:NP_073187.1 UniGene:Rn.41057
ProteinModelPortal:P61295 SMR:P61295 STRING:P61295 PRIDE:P61295
GeneID:64637 KEGG:rno:64637 NextBio:613616 Genevestigator:P61295
GermOnline:ENSRNOG00000022069 Uniprot:P61295
Length = 217
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 96 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 129
>UNIPROTKB|P61295 [details] [associations]
symbol:Hand2 "Heart- and neural crest derivatives-expressed
protein 2" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:621207 GO:GO:0005634
GO:GO:0019904 GO:GO:0007507 GO:GO:0030154 GO:GO:0003677
GO:GO:0071300 GO:GO:0045944 GO:GO:0006351 GO:GO:0001525
GO:GO:0003713 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0071407
eggNOG:NOG259520 HOGENOM:HOG000232082 HOVERGEN:HBG051880 KO:K09071
OrthoDB:EOG4FTW1T CTD:9464 EMBL:Y08138 IPI:IPI00206227
RefSeq:NP_073187.1 UniGene:Rn.41057 ProteinModelPortal:P61295
SMR:P61295 STRING:P61295 PRIDE:P61295 GeneID:64637 KEGG:rno:64637
NextBio:613616 Genevestigator:P61295 GermOnline:ENSRNOG00000022069
Uniprot:P61295
Length = 217
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 96 RPVKRRGTANRKERRRTQSINSAFAELRECIPNV 129
>ZFIN|ZDB-GENE-000511-1 [details] [associations]
symbol:hand2 "heart and neural crest derivatives
expressed transcript 2" species:7955 "Danio rerio" [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003144
"embryonic heart tube formation" evidence=IMP] [GO:0003142
"cardiogenic plate morphogenesis" evidence=IMP] [GO:0035118
"embryonic pectoral fin morphogenesis" evidence=IMP] [GO:0035051
"cardiocyte differentiation" evidence=IMP] [GO:0030859 "polarized
epithelial cell differentiation" evidence=IMP] [GO:0003007 "heart
morphogenesis" evidence=IMP] [GO:0060047 "heart contraction"
evidence=IMP] [GO:0003342 "proepicardium development" evidence=IMP]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0071908
"determination of intestine left/right asymmetry" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010002 "cardioblast differentiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-000511-1 GO:GO:0010002 GO:GO:0060047
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0035118 GO:GO:0048703
GO:GO:0030878 HOVERGEN:HBG051880 KO:K09071 GO:GO:0003144 CTD:9464
GO:GO:0003342 GO:GO:0030859 GO:GO:0003142 EMBL:BC083365
IPI:IPI00613094 RefSeq:NP_571701.2 UniGene:Dr.81423
ProteinModelPortal:Q5XJD8 STRING:Q5XJD8 DNASU:58150 GeneID:58150
KEGG:dre:58150 InParanoid:Q5XJD8 NextBio:20892399
ArrayExpress:Q5XJD8 GO:GO:0071908 Uniprot:Q5XJD8
Length = 208
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R VKRR TAN+KERRRTQSIN+AF++LRECIPN+
Sbjct: 87 RTVKRRPTANRKERRRTQSINSAFAELRECIPNV 120
>MGI|MGI:103577 [details] [associations]
symbol:Hand1 "heart and neural crest derivatives expressed
transcript 1" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI] [GO:0001525 "angiogenesis" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001707 "mesoderm formation" evidence=IMP] [GO:0001709 "cell
fate determination" evidence=NAS] [GO:0001947 "heart looping"
evidence=IMP] [GO:0003007 "heart morphogenesis" evidence=NAS;TAS]
[GO:0003144 "embryonic heart tube formation" evidence=IMP]
[GO:0003218 "cardiac left ventricle formation" evidence=ISO]
[GO:0003219 "cardiac right ventricle formation" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007507 "heart development" evidence=IGI;IMP]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030154 "cell
differentiation" evidence=IGI] [GO:0035050 "embryonic heart tube
development" evidence=IMP] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043425 "bHLH
transcription factor binding" evidence=ISO;IPI] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0055010 "ventricular
cardiac muscle tissue morphogenesis" evidence=ISO;IMP] [GO:0060411
"cardiac septum morphogenesis" evidence=ISO] [GO:0060485
"mesenchyme development" evidence=IGI] [GO:0060536 "cartilage
morphogenesis" evidence=IGI] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:103577 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0001525 GO:GO:0000122 GO:GO:0044212
GO:GO:0003713 GO:GO:0006366 GO:GO:0001707 GO:GO:0001829
GO:GO:0042475 GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0001709 GO:GO:0055010 GO:GO:0060411
GO:GO:0060707 GO:GO:0060536 CTD:9421 eggNOG:NOG259520
GeneTree:ENSGT00690000101643 HOGENOM:HOG000232082
HOVERGEN:HBG051880 KO:K09071 OMA:RPYFQSW OrthoDB:EOG4FTW1T
GO:GO:0003218 GO:GO:0003219 GO:GO:0003144 GO:GO:0060485 EMBL:U21226
EMBL:S79216 EMBL:U43714 IPI:IPI00132280 RefSeq:NP_032239.1
UniGene:Mm.4746 ProteinModelPortal:Q64279 SMR:Q64279 DIP:DIP-455N
IntAct:Q64279 STRING:Q64279 PhosphoSite:Q64279 PRIDE:Q64279
Ensembl:ENSMUST00000036917 Ensembl:ENSMUST00000160392 GeneID:15110
KEGG:mmu:15110 InParanoid:Q64279 NextBio:287510 Bgee:Q64279
Genevestigator:Q64279 GermOnline:ENSMUSG00000037335 Uniprot:Q64279
Length = 216
Score = 123 (48.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ KR+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 91 RLPKRKGSGPKKERRRTESINSAFAELRECIPNV 124
Score = 29 (15.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 50 FKADLSNHSSHRKNK 64
FKA+L R++K
Sbjct: 162 FKAELKKTDGGRESK 176
>RGD|621206 [details] [associations]
symbol:Hand1 "heart and neural crest derivatives expressed 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001707 "mesoderm
formation" evidence=IEA;ISO] [GO:0001824 "blastocyst development"
evidence=ISO] [GO:0001829 "trophectodermal cell differentiation"
evidence=IEA;ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0003144 "embryonic heart tube formation" evidence=IEA;ISO]
[GO:0003218 "cardiac left ventricle formation" evidence=IEA;ISO]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0035050 "embryonic heart tube development"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0060411 "cardiac septum morphogenesis" evidence=IEA;ISO]
[GO:0060485 "mesenchyme development" evidence=IEA;ISO] [GO:0060536
"cartilage morphogenesis" evidence=IEA;ISO] [GO:0060707
"trophoblast giant cell differentiation" evidence=IEA;ISO]
[GO:0061371 "determination of heart left/right asymmetry"
evidence=ISO] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:621206 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0001525 GO:GO:0000122
GO:GO:0044212 GO:GO:0003713 GO:GO:0006366 GO:GO:0001707
GO:GO:0001829 GO:GO:0042475 GO:GO:0043433 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0055010 GO:GO:0060411
GO:GO:0060707 GO:GO:0060536 CTD:9421 eggNOG:NOG259520
GeneTree:ENSGT00690000101643 HOGENOM:HOG000232082
HOVERGEN:HBG051880 KO:K09071 OMA:RPYFQSW OrthoDB:EOG4FTW1T
GO:GO:0003218 GO:GO:0003219 GO:GO:0003144 GO:GO:0060485 EMBL:Y08140
EMBL:BC097324 IPI:IPI00208642 RefSeq:NP_067603.1 UniGene:Rn.224598
UniGene:Rn.39340 ProteinModelPortal:P97832 STRING:P97832
Ensembl:ENSRNOT00000003486 GeneID:59112 KEGG:rno:59112
UCSC:RGD:621206 InParanoid:P97832 NextBio:611755
Genevestigator:P97832 GermOnline:ENSRNOG00000002582 Uniprot:P97832
Length = 216
Score = 120 (47.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 91 RLPRRKGSGPKKERRRTESINSAFAELRECIPNV 124
Score = 29 (15.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 50 FKADLSNHSSHRKNK 64
FKA+L R++K
Sbjct: 162 FKAELKKTDGGRESK 176
>UNIPROTKB|F1RQC4 [details] [associations]
symbol:HAND1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060707 "trophoblast giant cell differentiation"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IEA]
[GO:0060485 "mesenchyme development" evidence=IEA] [GO:0060411
"cardiac septum morphogenesis" evidence=IEA] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043425 "bHLH transcription factor
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003219 "cardiac right ventricle formation"
evidence=IEA] [GO:0003218 "cardiac left ventricle formation"
evidence=IEA] [GO:0003144 "embryonic heart tube formation"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001707
"mesoderm formation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0001525 GO:GO:0000122 GO:GO:0044212 GO:GO:0003713
GO:GO:0006366 GO:GO:0001707 GO:GO:0001829 GO:GO:0042475
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0055010 GO:GO:0060411 GO:GO:0060707 GO:GO:0060536
GeneTree:ENSGT00690000101643 OMA:RPYFQSW GO:GO:0003218
GO:GO:0003219 GO:GO:0003144 GO:GO:0060485 EMBL:FP102668
Ensembl:ENSSSCT00000018586 Uniprot:F1RQC4
Length = 214
Score = 119 (46.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 94 RLGRRKGSGPKKERRRTESINSAFAELRECIPNV 127
Score = 29 (15.3 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 50 FKADLSNHSSHRKNK 64
FKA+L R++K
Sbjct: 165 FKAELKKADGGRESK 179
>UNIPROTKB|O96004 [details] [associations]
symbol:HAND1 "Heart- and neural crest derivatives-expressed
protein 1" species:9606 "Homo sapiens" [GO:0001707 "mesoderm
formation" evidence=IEA] [GO:0003144 "embryonic heart tube
formation" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0060485 "mesenchyme development" evidence=IEA] [GO:0060536
"cartilage morphogenesis" evidence=IEA] [GO:0060707 "trophoblast
giant cell differentiation" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003218
"cardiac left ventricle formation" evidence=IMP] [GO:0003219
"cardiac right ventricle formation" evidence=IMP] [GO:0001824
"blastocyst development" evidence=IEP] [GO:0001829 "trophectodermal
cell differentiation" evidence=IEP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0043425 "bHLH transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0055010 "ventricular cardiac muscle tissue
morphogenesis" evidence=IMP] [GO:0060411 "cardiac septum
morphogenesis" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=ISS] [GO:0001947 "heart looping" evidence=ISS] [GO:0007507
"heart development" evidence=ISS] [GO:0035050 "embryonic heart tube
development" evidence=ISS] [GO:0042802 "identical protein binding"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=NAS] [GO:0003713 "transcription coactivator activity"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0042803
GO:GO:0005654 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0001525 GO:GO:0000122 GO:GO:0003713
GO:GO:0006366 GO:GO:0001707 GO:GO:0001829 GO:GO:0042475
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0055010 GO:GO:0060411 GO:GO:0060707 GO:GO:0060536 CTD:9421
eggNOG:NOG259520 HOGENOM:HOG000232082 HOVERGEN:HBG051880 KO:K09071
OMA:RPYFQSW OrthoDB:EOG4FTW1T GO:GO:0003218 GO:GO:0003219
GO:GO:0003144 GO:GO:0060485 EMBL:AF063012 EMBL:AF061756
EMBL:BC021190 IPI:IPI00014052 RefSeq:NP_004812.1 UniGene:Hs.152531
ProteinModelPortal:O96004 SMR:O96004 STRING:O96004
PhosphoSite:O96004 PRIDE:O96004 DNASU:9421 Ensembl:ENST00000231121
GeneID:9421 KEGG:hsa:9421 UCSC:uc003lvn.3 GeneCards:GC05M153834
HGNC:HGNC:4807 HPA:HPA040925 MIM:602406 neXtProt:NX_O96004
PharmGKB:PA29183 InParanoid:O96004 PhylomeDB:O96004 GenomeRNAi:9421
NextBio:35290 Bgee:O96004 CleanEx:HS_HAND1 Genevestigator:O96004
GermOnline:ENSG00000113196 Uniprot:O96004
Length = 215
Score = 119 (46.9 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 91 RLGRRKGSGPKKERRRTESINSAFAELRECIPNV 124
Score = 29 (15.3 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 50 FKADLSNHSSHRKNK 64
FKA+L R++K
Sbjct: 162 FKAELKKADGGRESK 176
>UNIPROTKB|Q0VCE2 [details] [associations]
symbol:HAND1 "Heart- and neural crest derivatives-expressed
protein 1" species:9913 "Bos taurus" [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043425 "bHLH transcription factor
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0003218 "cardiac left ventricle formation" evidence=IEA]
[GO:0003144 "embryonic heart tube formation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001707
"mesoderm formation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060536 "cartilage morphogenesis" evidence=IEA] [GO:0060485
"mesenchyme development" evidence=IEA] [GO:0060411 "cardiac septum
morphogenesis" evidence=IEA] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0001525 GO:GO:0000122
GO:GO:0044212 GO:GO:0003713 GO:GO:0006366 GO:GO:0001707
GO:GO:0001829 GO:GO:0042475 GO:GO:0043433 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0055010 GO:GO:0060411
GO:GO:0060707 GO:GO:0060536 EMBL:BC120210 IPI:IPI00709781
RefSeq:NP_001069229.1 UniGene:Bt.46230 ProteinModelPortal:Q0VCE2
STRING:Q0VCE2 PRIDE:Q0VCE2 Ensembl:ENSBTAT00000003015 GeneID:517952
KEGG:bta:517952 CTD:9421 eggNOG:NOG259520
GeneTree:ENSGT00690000101643 HOGENOM:HOG000232082
HOVERGEN:HBG051880 InParanoid:Q0VCE2 KO:K09071 OMA:RPYFQSW
OrthoDB:EOG4FTW1T NextBio:20872546 ArrayExpress:Q0VCE2
GO:GO:0003218 GO:GO:0003219 GO:GO:0003144 GO:GO:0060485
Uniprot:Q0VCE2
Length = 218
Score = 119 (46.9 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 94 RLGRRKGSGPKKERRRTESINSAFAELRECIPNV 127
Score = 29 (15.3 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 50 FKADLSNHSSHRKNK 64
FKA+L R++K
Sbjct: 165 FKAELKKADGGRESK 179
>UNIPROTKB|E2RPA0 [details] [associations]
symbol:HAND1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0060536 "cartilage
morphogenesis" evidence=IEA] [GO:0060485 "mesenchyme development"
evidence=IEA] [GO:0060411 "cardiac septum morphogenesis"
evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0003218 "cardiac left ventricle formation" evidence=IEA]
[GO:0003144 "embryonic heart tube formation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001829
"trophectodermal cell differentiation" evidence=IEA] [GO:0001707
"mesoderm formation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0001525 GO:GO:0000122 GO:GO:0044212 GO:GO:0003713
GO:GO:0006366 GO:GO:0001707 GO:GO:0001829 GO:GO:0042475
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0055010 GO:GO:0060411 GO:GO:0060707 GO:GO:0060536 CTD:9421
GeneTree:ENSGT00690000101643 KO:K09071 OMA:RPYFQSW GO:GO:0003218
GO:GO:0003219 GO:GO:0003144 GO:GO:0060485 EMBL:AAEX03003075
RefSeq:XP_546282.3 Ensembl:ENSCAFT00000027975 GeneID:489164
KEGG:cfa:489164 NextBio:20862373 Uniprot:E2RPA0
Length = 218
Score = 119 (46.9 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ + KKERRRT+SIN+AF++LRECIPN+
Sbjct: 94 RLGRRKGSGPKKERRRTESINSAFAELRECIPNV 127
Score = 29 (15.3 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 50 FKADLSNHSSHRKNK 64
FKA+L R++K
Sbjct: 165 FKAELKKADGGRESK 179
>UNIPROTKB|Q90691 [details] [associations]
symbol:HAND1 "Heart- and neural crest derivatives-expressed
protein 1" species:9031 "Gallus gallus" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:9421
HOVERGEN:HBG051880 KO:K09071 EMBL:U40041 IPI:IPI00578038
RefSeq:NP_990296.1 UniGene:Gga.478 ProteinModelPortal:Q90691
GeneID:395812 KEGG:gga:395812 NextBio:20815880 Uniprot:Q90691
Length = 202
Score = 111 (44.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 5 RVVKRRNTAN-KKERRRTQSINNAFSDLRECIPNI 38
R+ +R+ KKERRRT+SIN+AF++LRECIPN+
Sbjct: 79 RLGRRKGVGGPKKERRRTESINSAFAELRECIPNV 113
>ZFIN|ZDB-GENE-980605-20 [details] [associations]
symbol:par1 "paraxis" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-980605-20 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG036149 KO:K09070 EMBL:AJ006310 IPI:IPI00507600
RefSeq:NP_571047.1 UniGene:Dr.81253 ProteinModelPortal:Q9YHA3
GeneID:30159 KEGG:dre:30159 CTD:145624 InParanoid:Q9YHA3
NextBio:20806630 ArrayExpress:Q9YHA3 Uniprot:Q9YHA3
Length = 183
Score = 102 (41.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 6 VVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHRKN 63
+VK+RN AN +ER RTQS+N AF+ LR IP + I+ + S++ SH N
Sbjct: 62 IVKQRNAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRL-ASSYISHLAN 118
>ZFIN|ZDB-GENE-070803-3 [details] [associations]
symbol:bhlha15 "basic helix-loop-helix family, member
a15" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0031017 "exocrine pancreas development"
evidence=IMP;IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 ZFIN:ZDB-GENE-070803-3 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00680000099574 GO:GO:0031017
EMBL:CABZ01021848 IPI:IPI00631445 Ensembl:ENSDART00000112119
OMA:SWRGSLR Bgee:F1RDU6 Uniprot:F1RDU6
Length = 184
Score = 83 (34.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIIS 46
RR +N++ER+R +NNAF LRE IP++ +T+ +S
Sbjct: 77 RRLESNERERQRMHKLNNAFQALREAIPHV-KTEKKLS 113
Score = 33 (16.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 48 DDFKADLSNHSSHRKNKSQ 66
++ + DLSN+ +H + SQ
Sbjct: 164 EEGEEDLSNYLNHIHSFSQ 182
>ZFIN|ZDB-GENE-100922-228 [details] [associations]
symbol:si:ch211-251p5.3 "si:ch211-251p5.3"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-100922-228
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
EMBL:CR626923 IPI:IPI00495940 RefSeq:XP_696212.3
Ensembl:ENSDART00000011858 GeneID:567817 KEGG:dre:567817
OMA:RNTANAR NextBio:20888864 Uniprot:E7F361
Length = 200
Score = 99 (39.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 4 IRVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHRKN 63
I V++RNTAN +ER RT S+N AF+ LR IP + I+ + S++ SH N
Sbjct: 73 ITEVRQRNTANARERERTNSVNTAFTALRTLIPTEPADRKLSKIETLRL-ASSYISHLGN 131
>MGI|MGI:104664 [details] [associations]
symbol:Tcf15 "transcription factor 15" species:10090 "Mus
musculus" [GO:0001756 "somitogenesis" evidence=IMP] [GO:0003016
"respiratory system process" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0016265 "death" evidence=IMP] [GO:0036342
"post-anal tail morphogenesis" evidence=IMP] [GO:0042755 "eating
behavior" evidence=IMP] [GO:0043583 "ear development" evidence=IMP]
[GO:0043588 "skin development" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048339 "paraxial mesoderm
development" evidence=IMP] [GO:0048644 "muscle organ morphogenesis"
evidence=IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IMP] [GO:0050884 "neuromuscular process controlling
posture" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:104664 GO:GO:0005634
GO:GO:0043588 GO:GO:0006355 GO:GO:0048644 GO:GO:0003677
GO:GO:0042755 GO:GO:0006351 GO:GO:0001756 GO:GO:0003016
GO:GO:0016265 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705
GO:GO:0036342 GO:GO:0043583 GO:GO:0050884 GO:GO:0048339
GeneTree:ENSGT00690000101643 HOVERGEN:HBG036149
HOGENOM:HOG000231706 OrthoDB:EOG4ZPDWJ CTD:6939 KO:K09070
eggNOG:NOG246787 OMA:NQRKGGS EMBL:U18658 EMBL:BC027533 EMBL:U20164
IPI:IPI00222980 RefSeq:NP_033354.2 UniGene:Mm.3881
ProteinModelPortal:Q60756 SMR:Q60756 STRING:Q60756
PhosphoSite:Q60756 PaxDb:Q60756 PRIDE:Q60756
Ensembl:ENSMUST00000089112 GeneID:21407 KEGG:mmu:21407
InParanoid:Q60756 NextBio:300680 Bgee:Q60756 CleanEx:MM_TCF15
Genevestigator:Q60756 GermOnline:ENSMUSG00000068079 Uniprot:Q60756
Length = 195
Score = 95 (38.5 bits), Expect = 0.00013, P = 0.00013
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHR 61
P++ VV++R AN +ER RTQS+N AF+ LR IP + I+ + S++ +H
Sbjct: 65 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRL-ASSYIAHL 122
Query: 62 KN 63
N
Sbjct: 123 AN 124
>RGD|1308464 [details] [associations]
symbol:Tcf15 "transcription factor 15" species:10116 "Rattus
norvegicus" [GO:0001756 "somitogenesis" evidence=IEA;ISO]
[GO:0003016 "respiratory system process" evidence=IEA;ISO]
[GO:0007517 "muscle organ development" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016265 "death" evidence=IEA;ISO] [GO:0036342 "post-anal tail
morphogenesis" evidence=IEA;ISO] [GO:0042755 "eating behavior"
evidence=IEA;ISO] [GO:0043583 "ear development" evidence=IEA;ISO]
[GO:0043588 "skin development" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048339 "paraxial
mesoderm development" evidence=IEA;ISO] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA;ISO] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:1308464
GO:GO:0043588 GO:GO:0048644 GO:GO:0042755 GO:GO:0001756
GO:GO:0003016 GO:GO:0016265 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0048705 GO:GO:0043583 GO:GO:0050884 GO:GO:0048339
GeneTree:ENSGT00690000101643 OrthoDB:EOG4ZPDWJ CTD:6939 KO:K09070
OMA:NQRKGGS IPI:IPI00210990 RefSeq:NP_001162051.1 UniGene:Rn.222438
Ensembl:ENSRNOT00000000013 GeneID:296272 KEGG:rno:296272
UCSC:RGD:1308464 NextBio:640896 Uniprot:D3ZEK9
Length = 195
Score = 95 (38.5 bits), Expect = 0.00013, P = 0.00013
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHR 61
P++ VV++R AN +ER RTQS+N AF+ LR IP + I+ + S++ +H
Sbjct: 65 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRL-ASSYIAHL 122
Query: 62 KN 63
N
Sbjct: 123 AN 124
>UNIPROTKB|A2VE98 [details] [associations]
symbol:TCF15 "Transcription factor 15 (Basic
helix-loop-helix)" species:9913 "Bos taurus" [GO:0050884
"neuromuscular process controlling posture" evidence=IEA]
[GO:0048705 "skeletal system morphogenesis" evidence=IEA]
[GO:0048644 "muscle organ morphogenesis" evidence=IEA] [GO:0048339
"paraxial mesoderm development" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0043583 "ear development"
evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
[GO:0036342 "post-anal tail morphogenesis" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0003016 "respiratory system
process" evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0043588 GO:GO:0048644 GO:GO:0042755 GO:GO:0001756
GO:GO:0003016 GO:GO:0016265 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0048705 GO:GO:0043583 GO:GO:0050884 GO:GO:0048339
GeneTree:ENSGT00690000101643 HOVERGEN:HBG036149
HOGENOM:HOG000231706 OrthoDB:EOG4ZPDWJ CTD:6939 KO:K09070
eggNOG:NOG246787 OMA:NQRKGGS EMBL:DAAA02036374 EMBL:BC133638
IPI:IPI00695822 RefSeq:NP_001075190.1 UniGene:Bt.63520
Ensembl:ENSBTAT00000007554 GeneID:518491 KEGG:bta:518491
InParanoid:A2VE98 NextBio:20872665 Uniprot:A2VE98
Length = 197
Score = 95 (38.5 bits), Expect = 0.00013, P = 0.00013
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHR 61
P++ VV++R AN +ER RTQS+N AF+ LR IP + I+ + S++ +H
Sbjct: 65 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRL-ASSYIAHL 122
Query: 62 KN 63
N
Sbjct: 123 AN 124
>UNIPROTKB|F1S863 [details] [associations]
symbol:TCF15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048339 "paraxial mesoderm development"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043583 "ear development" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0043588 GO:GO:0048644
GO:GO:0042755 GO:GO:0001756 GO:GO:0003016 GO:GO:0016265
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705 GO:GO:0043583
GO:GO:0050884 GO:GO:0048339 GeneTree:ENSGT00690000101643 KO:K09070
OMA:NQRKGGS EMBL:CU606951 RefSeq:XP_003134406.1 UniGene:Ssc.45238
Ensembl:ENSSSCT00000007881 GeneID:100517249 KEGG:ssc:100517249
Uniprot:F1S863
Length = 197
Score = 95 (38.5 bits), Expect = 0.00013, P = 0.00013
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHR 61
P++ VV++R AN +ER RTQS+N AF+ LR IP + I+ + S++ +H
Sbjct: 65 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRL-ASSYIAHL 122
Query: 62 KN 63
N
Sbjct: 123 AN 124
>UNIPROTKB|E2RI49 [details] [associations]
symbol:TCF15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048339 "paraxial mesoderm development"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0043583 "ear development" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0043588 GO:GO:0048644
GO:GO:0042755 GO:GO:0001756 GO:GO:0003016 GO:GO:0016265
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705 GO:GO:0043583
GO:GO:0050884 GO:GO:0048339 GeneTree:ENSGT00690000101643 CTD:6939
KO:K09070 OMA:NQRKGGS EMBL:AAEX03013859 RefSeq:XP_852061.1
Ensembl:ENSCAFT00000011122 GeneID:609667 KEGG:cfa:609667
NextBio:20895256 Uniprot:E2RI49
Length = 202
Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHR 61
P++ VV++R AN +ER RTQS+N AF+ LR IP + I+ + S++ +H
Sbjct: 70 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRL-ASSYIAHL 127
Query: 62 KN 63
N
Sbjct: 128 AN 129
>UNIPROTKB|A7Z095 [details] [associations]
symbol:TWIST3 "Twist3" species:9031 "Gallus gallus"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101840
HOVERGEN:HBG019071 InterPro:IPR015789 PANTHER:PTHR23349:SF6
KO:K09069 HOGENOM:HOG000261629 EMBL:AADN02072407 EMBL:BK006265
IPI:IPI00595254 RefSeq:NP_001096684.1 UniGene:Gga.12350
ProteinModelPortal:A7Z095 Ensembl:ENSGALT00000010219 GeneID:426886
KEGG:gga:426886 CTD:30176 eggNOG:NOG315731 OMA:CPDSPED
OrthoDB:EOG4Q84ZS NextBio:20828285 Uniprot:A7Z095
Length = 161
Score = 92 (37.4 bits), Expect = 0.00014, P = 0.00014
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N+AF++LR+ IP L +D + I K
Sbjct: 68 QRVIANVRERQRTQSLNDAFAELRKIIPT-LPSDKLSKIQTLK 109
>UNIPROTKB|P13903 [details] [associations]
symbol:twist1 "Twist-related protein" species:8355 "Xenopus
laevis" [GO:0014029 "neural crest formation" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0014029 HOVERGEN:HBG019071
InterPro:IPR015789 PANTHER:PTHR23349:SF6 KO:K09069 EMBL:M27730
EMBL:BC123238 PIR:A33637 RefSeq:NP_001079352.1 UniGene:Xl.879
ProteinModelPortal:P13903 GeneID:378698 KEGG:xla:378698 CTD:378698
Xenbase:XB-GENE-865309 Uniprot:P13903
Length = 166
Score = 92 (37.4 bits), Expect = 0.00016, P = 0.00016
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AFS LR+ IP L +D + I K
Sbjct: 73 QRVMANVRERQRTQSLNEAFSSLRKIIPT-LPSDKLSKIQTLK 114
>UNIPROTKB|Q12870 [details] [associations]
symbol:TCF15 "Transcription factor 15" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0036342
"post-anal tail morphogenesis" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0043583 "ear development" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0048339 "paraxial
mesoderm development" evidence=IEA] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007498 "mesoderm development" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0043588 GO:GO:0007498 GO:GO:0048644
GO:GO:0003677 GO:GO:0042755 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 GO:GO:0001756 GO:GO:0003016 GO:GO:0016265
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048705 GO:GO:0043583
GO:GO:0050884 GO:GO:0048339 HOVERGEN:HBG036149 OrthoDB:EOG4ZPDWJ
CTD:6939 KO:K09070 EMBL:U08336 EMBL:AL133231 IPI:IPI00010762
PIR:A57717 RefSeq:NP_004600.2 UniGene:Hs.437
ProteinModelPortal:Q12870 SMR:Q12870 STRING:Q12870
PhosphoSite:Q12870 DMDM:116242817 PRIDE:Q12870 DNASU:6939
Ensembl:ENST00000246080 GeneID:6939 KEGG:hsa:6939
GeneCards:GC20M000532 HGNC:HGNC:11627 HPA:HPA046827 MIM:601010
neXtProt:NX_Q12870 PharmGKB:PA36382 eggNOG:NOG246787
InParanoid:Q12870 OMA:NQRKGGS PhylomeDB:Q12870 GenomeRNAi:6939
NextBio:27157 ArrayExpress:Q12870 Bgee:Q12870 CleanEx:HS_TCF15
Genevestigator:Q12870 GermOnline:ENSG00000125878 Uniprot:Q12870
Length = 199
Score = 94 (38.1 bits), Expect = 0.00017, P = 0.00017
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIP 36
P++ VV++R AN +ER RTQS+N AF+ LR IP
Sbjct: 67 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIP 100
>UNIPROTKB|P79782 [details] [associations]
symbol:TCF15 "Transcription factor 15" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0007275 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG036149 EMBL:U76665 EMBL:U72641
IPI:IPI00601841 RefSeq:NP_990277.1 UniGene:Gga.22945
ProteinModelPortal:P79782 PRIDE:P79782 GeneID:395788
KEGG:gga:395788 CTD:6939 KO:K09070 NextBio:20815856 Uniprot:P79782
Length = 183
Score = 93 (37.8 bits), Expect = 0.00017, P = 0.00017
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 2 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHR 61
P++ +VK+R AN +ER RTQS+N AF+ LR IP + I+ + S++ +H
Sbjct: 56 PMV-MVKQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRL-ASSYIAHL 113
Query: 62 KN 63
N
Sbjct: 114 AN 115
>UNIPROTKB|O96642 [details] [associations]
symbol:TWIST "Twist-related protein" species:7741
"Branchiostoma belcheri" [GO:0007498 "mesoderm development"
evidence=NAS] [GO:0045596 "negative regulation of cell
differentiation" evidence=NAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0007275 GO:GO:0005634
GO:GO:0030154 GO:GO:0006355 GO:GO:0007498 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045596
EMBL:AF097914 ProteinModelPortal:O96642 HOVERGEN:HBG019071
InterPro:IPR015789 PANTHER:PTHR23349:SF6 Uniprot:O96642
Length = 196
Score = 92 (37.4 bits), Expect = 0.00028, P = 0.00028
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AFS LR+ IP L +D + I K
Sbjct: 96 QRVLANVRERQRTQSLNEAFSSLRKIIPT-LPSDKLSKIQTLK 137
>ZFIN|ZDB-GENE-980526-235 [details] [associations]
symbol:twist2 "twist2" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-980526-235 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00690000101840 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J CTD:117581 OMA:DNKMSSC
EMBL:CU929427 EMBL:BC083313 EMBL:EF620931 IPI:IPI00481132
RefSeq:NP_001005956.1 UniGene:Dr.36752 Ensembl:ENSDART00000114814
GeneID:30395 KEGG:dre:30395 NextBio:20806806 Uniprot:Q5XJI8
Length = 163
Score = 89 (36.4 bits), Expect = 0.00034, P = 0.00034
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 70 QRVLANVRERQRTQSLNEAFASLRKIIPT-LPSDKLSKIQTLK 111
>FB|FBgn0263118 [details] [associations]
symbol:tx "taxi" species:7227 "Drosophila melanogaster"
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IC;ISS] [GO:0070888 "E-box
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0016203 "muscle attachment"
evidence=IEP;TAS] [GO:0043425 "bHLH transcription factor binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0007525 "somatic muscle
development" evidence=TAS] [GO:0007498 "mesoderm development"
evidence=IEP] [GO:0033627 "cell adhesion mediated by integrin"
evidence=IMP] [GO:0007474 "imaginal disc-derived wing vein
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
GO:GO:0007498 GO:GO:0003677 GO:GO:0007474 GO:GO:0016203
GO:GO:0000981 GO:GO:0033627 GO:GO:0046982 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0007525 KO:K09104 EMBL:L33401 EMBL:AY051581
EMBL:BT003640 PIR:A56066 RefSeq:NP_524516.2 UniGene:Dm.20759
UniGene:Dm.7724 ProteinModelPortal:P41894 SMR:P41894 IntAct:P41894
MINT:MINT-332545 STRING:P41894 EnsemblMetazoa:FBtr0085009
GeneID:43190 KEGG:dme:Dmel_CG5441 UCSC:CG5441-RA CTD:43190
FlyBase:FBgn0008649 eggNOG:NOG289751 InParanoid:P41894 OMA:QPSACIS
OrthoDB:EOG41VHJZ PhylomeDB:P41894 GenomeRNAi:43190 NextBio:832637
Bgee:P41894 GermOnline:CG5441 GO:GO:0043425 Uniprot:P41894
Length = 384
Score = 96 (38.9 bits), Expect = 0.00038, P = 0.00038
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDD 49
RR TAN +ER R + IN AF LR C+P ++ +D + ++
Sbjct: 95 RRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNE 135
>ZFIN|ZDB-GENE-000210-6 [details] [associations]
symbol:twist1a "twist1a" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-000210-6 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P01106 GeneTree:ENSGT00690000101840 HOVERGEN:HBG019071
InterPro:IPR015789 PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J EMBL:CU627989 EMBL:AF205259
EMBL:BC076428 EMBL:DQ191169 EMBL:DQ351987 EMBL:BK006285
IPI:IPI00490198 RefSeq:NP_571059.1 UniGene:Dr.79620 STRING:Q9PTE3
Ensembl:ENSDART00000043595 GeneID:30175 KEGG:dre:30175 CTD:30175
InParanoid:Q9PTE3 NextBio:20806643 Uniprot:Q9PTE3
Length = 171
Score = 89 (36.4 bits), Expect = 0.00041, P = 0.00041
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 78 QRVMANVRERQRTQSLNEAFASLRKIIPT-LPSDKLSKIQTLK 119
>UNIPROTKB|H7BY00 [details] [associations]
symbol:TWIST1 "Twist-related protein 1" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC004744 InterPro:IPR015789
PANTHER:PTHR23349:SF6 EMBL:AC003986 HGNC:HGNC:12428 ChiTaRS:TWIST1
EMBL:AC003073 ProteinModelPortal:H7BY00 Ensembl:ENST00000354571
Uniprot:H7BY00
Length = 135
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 42 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 83
>UNIPROTKB|F1SEI1 [details] [associations]
symbol:TWIST1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000802 "positive regulation of endocardial cushion to
mesenchymal transition involved in heart valve formation"
evidence=IEA] [GO:2000793 "cell proliferation involved in heart
valve development" evidence=IEA] [GO:2000780 "negative regulation
of double-strand break repair" evidence=IEA] [GO:2000778 "positive
regulation of interleukin-6 secretion" evidence=IEA] [GO:2000773
"negative regulation of cellular senescence" evidence=IEA]
[GO:2000679 "positive regulation of transcription regulatory region
DNA binding" evidence=IEA] [GO:2000276 "negative regulation of
oxidative phosphorylation uncoupler activity" evidence=IEA]
[GO:2000147 "positive regulation of cell motility" evidence=IEA]
[GO:0071639 "positive regulation of monocyte chemotactic protein-1
production" evidence=IEA] [GO:0071456 "cellular response to
hypoxia" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0060900 "embryonic camera-type eye formation" evidence=IEA]
[GO:0060363 "cranial suture morphogenesis" evidence=IEA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IEA] [GO:0048642 "negative regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0043518 "negative regulation of
DNA damage response, signal transduction by p53 class mediator"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0035359 "negative regulation of peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0033128 "negative regulation of histone phosphorylation"
evidence=IEA] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032720 "negative regulation
of tumor necrosis factor production" evidence=IEA] [GO:0032000
"positive regulation of fatty acid beta-oxidation" evidence=IEA]
[GO:0030500 "regulation of bone mineralization" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0014067 "negative regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003253
"cardiac neural crest cell migration involved in outflow tract
morphogenesis" evidence=IEA] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IEA] [GO:0003183 "mitral valve
morphogenesis" evidence=IEA] [GO:0003180 "aortic valve
morphogenesis" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006915 GO:GO:0001764 GO:GO:0001701
GO:GO:0045944 GO:GO:0071456 GO:GO:0032000 GO:GO:0000122
GO:GO:0043518 GO:GO:0000981 GO:GO:0032720 GO:GO:0030500
GO:GO:0003183 GO:GO:0071639 GO:GO:0001843 GO:GO:0043433
GO:GO:0035116 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649
GO:GO:2000147 GO:GO:0035115 GO:GO:0042733 GO:GO:0048701
GO:GO:0061029 GO:GO:0045668 GO:GO:0070888 GO:GO:2000778
GO:GO:0032760 GO:GO:0035359 GO:GO:0003203 GO:GO:0060363
GO:GO:0035067 GO:GO:2000773 GO:GO:0048642 GO:GO:0003180
GO:GO:2000679 GO:GO:0014067 GO:GO:0003253
GeneTree:ENSGT00690000101840 GO:GO:2000780 GO:GO:2000276
GO:GO:0060900 InterPro:IPR015789 PANTHER:PTHR23349:SF6
GO:GO:2000793 GO:GO:0033128 GO:GO:2000802 EMBL:CU928096
Ensembl:ENSSSCT00000016745 Uniprot:F1SEI1
Length = 150
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 48 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 89
>RGD|621455 [details] [associations]
symbol:Twist1 "twist basic helix-loop-helix transcription factor
1" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO]
[GO:0001503 "ossification" evidence=ISO] [GO:0001649 "osteoblast
differentiation" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=ISO] [GO:0001764 "neuron migration"
evidence=ISO] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0003180 "aortic valve morphogenesis" evidence=ISO] [GO:0003183
"mitral valve morphogenesis" evidence=ISO] [GO:0003203 "endocardial
cushion morphogenesis" evidence=ISO] [GO:0003253 "cardiac neural
crest cell migration involved in outflow tract morphogenesis"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=ISO] [GO:0014067 "negative regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0030500 "regulation of bone
mineralization" evidence=ISO] [GO:0032000 "positive regulation of
fatty acid beta-oxidation" evidence=ISO] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=ISO]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=ISO] [GO:0033128 "negative regulation of
histone phosphorylation" evidence=ISO] [GO:0035067 "negative
regulation of histone acetylation" evidence=ISO] [GO:0035115
"embryonic forelimb morphogenesis" evidence=ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035137
"hindlimb morphogenesis" evidence=ISO] [GO:0035359 "negative
regulation of peroxisome proliferator activated receptor signaling
pathway" evidence=ISO] [GO:0042476 "odontogenesis" evidence=IEP]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IDA;IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=ISO] [GO:0044092
"negative regulation of molecular function" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=ISO] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0048642 "negative regulation of
skeletal muscle tissue development" evidence=ISO] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0060021 "palate development" evidence=IEP]
[GO:0060348 "bone development" evidence=IEP] [GO:0060363 "cranial
suture morphogenesis" evidence=ISO] [GO:0060900 "embryonic
camera-type eye formation" evidence=ISO] [GO:0061029 "eyelid
development in camera-type eye" evidence=ISO] [GO:0061309 "cardiac
neural crest cell development involved in outflow tract
morphogenesis" evidence=ISO] [GO:0070888 "E-box binding"
evidence=ISO] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEP] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071639 "positive regulation of monocyte
chemotactic protein-1 production" evidence=ISO] [GO:2000147
"positive regulation of cell motility" evidence=ISO] [GO:2000276
"negative regulation of oxidative phosphorylation uncoupler
activity" evidence=ISO] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=ISO]
[GO:2000773 "negative regulation of cellular senescence"
evidence=ISO] [GO:2000778 "positive regulation of interleukin-6
secretion" evidence=ISO] [GO:2000780 "negative regulation of
double-strand break repair" evidence=ISO] [GO:2000793 "cell
proliferation involved in heart valve development" evidence=ISO]
[GO:2000802 "positive regulation of endocardial cushion to
mesenchymal transition involved in heart valve formation"
evidence=ISO] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:621455 GO:GO:0005634 GO:GO:0006915 GO:GO:0001764
GO:GO:0043066 GO:GO:0071363 GO:GO:0001701 GO:GO:0045944
GO:GO:0071456 GO:GO:0032000 GO:GO:0000122 GO:GO:0043518
GO:GO:0000981 GO:GO:0032720 GO:GO:0030500 GO:GO:0003183
GO:GO:0071639 GO:GO:0001843 GO:GO:0043433 GO:GO:0035116
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649 GO:GO:2000147
GO:GO:0035115 GO:GO:0060021 GO:GO:0042733 GO:GO:0042476
GO:GO:0060348 GO:GO:0048701 GO:GO:0061029 GO:GO:0045668
GO:GO:0070888 GO:GO:2000778 GO:GO:0032760 GO:GO:0035359
GO:GO:0050679 GO:GO:0003203 GO:GO:0060363 GO:GO:0035067
GO:GO:2000773 GO:GO:0048642 GO:GO:0003180 GO:GO:2000679
GO:GO:0014067 GO:GO:0003253 GO:GO:2000780 GO:GO:2000276
GO:GO:0060900 InterPro:IPR015789 PANTHER:PTHR23349:SF6
GO:GO:2000793 GO:GO:0033128 GO:GO:2000802 IPI:IPI00189140
UniGene:Rn.161904 EMBL:AF266260 ProteinModelPortal:Q9JI41
STRING:Q9JI41 UCSC:RGD:621455 InParanoid:Q9JI41 ArrayExpress:Q9JI41
Genevestigator:Q9JI41 Uniprot:Q9JI41
Length = 86
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 1 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 42
>ZFIN|ZDB-GENE-060503-414 [details] [associations]
symbol:scxa "scleraxis homolog A (mouse)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-060503-414
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00690000101643
EMBL:BX255894 IPI:IPI00633306 Ensembl:ENSDART00000105192
Bgee:F1Q9G7 Uniprot:F1Q9G7
Length = 204
Score = 90 (36.7 bits), Expect = 0.00053, P = 0.00053
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 7 VKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHRKN 63
+++RN AN +ER RT S+N AF+ LR IP + I+ + S++ SH N
Sbjct: 83 IRQRNAANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRL-ASSYISHLGN 138
>UNIPROTKB|Q9YH69 [details] [associations]
symbol:cdermo-1 "Dermo protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001076 "RNA polymerase
II transcription factor binding transcription factor activity"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0010838 "positive regulation of keratinocyte proliferation"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IEA] [GO:0043392 "negative regulation
of DNA binding" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IEA]
[GO:0060325 "face morphogenesis" evidence=IEA] [GO:0061303 "cornea
development in camera-type eye" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005737
GO:GO:0008285 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0000122 GO:GO:0032720 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0045668 GO:GO:0001076 HSSP:P01106 GO:GO:0045638 GO:GO:0043392
GO:GO:0010838 GeneTree:ENSGT00690000101840 HOVERGEN:HBG019071
InterPro:IPR015789 PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J CTD:117581 OMA:DNKMSSC
EMBL:AADN02034437 EMBL:AADN02034438 EMBL:AJ131110 EMBL:BK006264
IPI:IPI00600994 RefSeq:NP_990010.1 UniGene:Gga.218 STRING:Q9YH69
Ensembl:ENSGALT00000006798 GeneID:395405 KEGG:gga:395405
InParanoid:Q9YH69 NextBio:20815489 Uniprot:Q9YH69
Length = 160
Score = 87 (35.7 bits), Expect = 0.00056, P = 0.00056
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>UNIPROTKB|A4IFM6 [details] [associations]
symbol:TWIST2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0010838 "positive regulation of keratinocyte proliferation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0008285 GO:GO:0003700
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0032720
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325
GO:GO:0061303 GO:GO:0048701 GO:GO:0045668 GO:GO:0001076
GO:GO:0045638 GO:GO:0043392 GO:GO:0010838
GeneTree:ENSGT00690000101840 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J CTD:117581 OMA:DNKMSSC
EMBL:DAAA02009403 EMBL:DAAA02009404 EMBL:DAAA02009405
EMBL:DAAA02009406 EMBL:DAAA02009407 EMBL:DAAA02009408 EMBL:BC134662
IPI:IPI00704219 RefSeq:NP_001077217.1 UniGene:Bt.87327 SMR:A4IFM6
STRING:A4IFM6 Ensembl:ENSBTAT00000028589 GeneID:540060
KEGG:bta:540060 InParanoid:A4IFM6 NextBio:20878390 Uniprot:A4IFM6
Length = 160
Score = 87 (35.7 bits), Expect = 0.00056, P = 0.00056
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>UNIPROTKB|E2RQT1 [details] [associations]
symbol:TWIST2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061303 "cornea development in camera-type
eye" evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0010838 "positive regulation of keratinocyte proliferation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0008285 GO:GO:0003700
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0032720
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325
GO:GO:0061303 GO:GO:0048701 GO:GO:0045668 GO:GO:0001076
GO:GO:0045638 GO:GO:0043392 GO:GO:0010838
GeneTree:ENSGT00690000101840 InterPro:IPR015789
PANTHER:PTHR23349:SF6 KO:K09069 CTD:117581 OMA:DNKMSSC
EMBL:AAEX03014505 RefSeq:XP_543311.1 ProteinModelPortal:E2RQT1
SMR:E2RQT1 Ensembl:ENSCAFT00000019798 GeneID:486185 KEGG:cfa:486185
NextBio:20860008 Uniprot:E2RQT1
Length = 160
Score = 87 (35.7 bits), Expect = 0.00056, P = 0.00056
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>UNIPROTKB|Q8WVJ9 [details] [associations]
symbol:TWIST2 "Twist-related protein 2" species:9606 "Homo
sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0010838
"positive regulation of keratinocyte proliferation" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043392 "negative regulation
of DNA binding" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0048701 "embryonic
cranial skeleton morphogenesis" evidence=IEA] [GO:0060325 "face
morphogenesis" evidence=IEA] [GO:0061303 "cornea development in
camera-type eye" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0008285
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0000122 GO:GO:0032720 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0001649 GO:GO:0060325 GO:GO:0061303 GO:GO:0048701
GO:GO:0045668 GO:GO:0001076 GO:GO:0045638 GO:GO:0043392
GO:GO:0010838 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J EMBL:BC017907 EMBL:BC033168
EMBL:BC103755 IPI:IPI00103145 RefSeq:NP_001258822.1
RefSeq:NP_476527.1 UniGene:Hs.422585 ProteinModelPortal:Q8WVJ9
SMR:Q8WVJ9 IntAct:Q8WVJ9 STRING:Q8WVJ9 PhosphoSite:Q8WVJ9
DMDM:32699724 PRIDE:Q8WVJ9 DNASU:117581 Ensembl:ENST00000448943
GeneID:117581 KEGG:hsa:117581 UCSC:uc010znx.2 CTD:117581
GeneCards:GC02P239757 HGNC:HGNC:20670 MIM:227260 MIM:607556
neXtProt:NX_Q8WVJ9 Orphanet:1807 PharmGKB:PA134973713 OMA:DNKMSSC
GenomeRNAi:117581 NextBio:80218 Bgee:Q8WVJ9 CleanEx:HS_TWIST2
Genevestigator:Q8WVJ9 Uniprot:Q8WVJ9
Length = 160
Score = 87 (35.7 bits), Expect = 0.00056, P = 0.00056
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>UNIPROTKB|F2Z5R9 [details] [associations]
symbol:TWIST2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0010838 "positive regulation of keratinocyte proliferation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0008285 GO:GO:0003700
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0032720
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325
GO:GO:0061303 GO:GO:0048701 GO:GO:0045668 GO:GO:0001076
GO:GO:0045638 GO:GO:0043392 GO:GO:0010838
GeneTree:ENSGT00690000101840 InterPro:IPR015789
PANTHER:PTHR23349:SF6 KO:K09069 OMA:DNKMSSC EMBL:CU972369
RefSeq:XP_003133824.1 UniGene:Ssc.24416 ProteinModelPortal:F2Z5R9
SMR:F2Z5R9 Ensembl:ENSSSCT00000017798 GeneID:100519927
KEGG:ssc:100519927 Uniprot:F2Z5R9
Length = 160
Score = 87 (35.7 bits), Expect = 0.00056, P = 0.00056
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>MGI|MGI:104685 [details] [associations]
symbol:Twist2 "twist basic helix-loop-helix transcription
factor 2" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0001076 "RNA polymerase II transcription
factor binding transcription factor activity" evidence=IDA]
[GO:0001649 "osteoblast differentiation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0010838 "positive regulation of keratinocyte
proliferation" evidence=IMP] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IGI;IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0043392
"negative regulation of DNA binding" evidence=IDA] [GO:0044092
"negative regulation of molecular function" evidence=IDA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IMP] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=ISO;IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IGI] [GO:0060325 "face
morphogenesis" evidence=IMP] [GO:0061303 "cornea development in
camera-type eye" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:104685 GO:GO:0005737
GO:GO:0008285 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0032720 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325 GO:GO:0061303
GO:GO:0048701 GO:GO:0045668 GO:GO:0001076 GO:GO:0045638
GO:GO:0043392 GO:GO:0010838 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 eggNOG:NOG258515 KO:K09069
HOGENOM:HOG000261629 OrthoDB:EOG434W7J CTD:117581 EMBL:U36384
EMBL:AK011861 EMBL:AK011180 IPI:IPI00172358 RefSeq:NP_031881.1
UniGene:Mm.9474 ProteinModelPortal:Q9D030 SMR:Q9D030 IntAct:Q9D030
STRING:Q9D030 PhosphoSite:Q9D030 PRIDE:Q9D030 GeneID:13345
KEGG:mmu:13345 InParanoid:Q9D030 NextBio:283658 CleanEx:MM_TWIST2
Genevestigator:Q9D030 GermOnline:ENSMUSG00000007805 Uniprot:Q9D030
Length = 160
Score = 87 (35.7 bits), Expect = 0.00056, P = 0.00056
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>RGD|621286 [details] [associations]
symbol:Twist2 "twist basic helix-loop-helix transcription factor
2" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0001076 "RNA polymerase II transcription
factor binding transcription factor activity" evidence=IEA;ISO]
[GO:0001649 "osteoblast differentiation" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010838 "positive regulation
of keratinocyte proliferation" evidence=IEA;ISO] [GO:0019904
"protein domain specific binding" evidence=IEA;ISO] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043392 "negative regulation of DNA
binding" evidence=IEA;ISO] [GO:0044092 "negative regulation of
molecular function" evidence=ISO] [GO:0045638 "negative regulation
of myeloid cell differentiation" evidence=IEA;ISO] [GO:0045668
"negative regulation of osteoblast differentiation"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IEA;ISO]
[GO:0060325 "face morphogenesis" evidence=IEA;ISO] [GO:0061303
"cornea development in camera-type eye" evidence=IEA;ISO]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:621286 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0043066
GO:GO:0008285 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0032720 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0001649 GO:GO:0060325 GO:GO:0061303
GO:GO:0048701 GO:GO:0045668 GO:GO:0001076 GO:GO:0045638
GO:GO:0043392 GO:GO:0010838 GeneTree:ENSGT00690000101840
HOVERGEN:HBG019071 InterPro:IPR015789 PANTHER:PTHR23349:SF6
eggNOG:NOG258515 KO:K09069 HOGENOM:HOG000261629 OrthoDB:EOG434W7J
CTD:117581 OMA:DNKMSSC EMBL:Y08139 IPI:IPI00208640
RefSeq:NP_067723.1 UniGene:Rn.16279 ProteinModelPortal:P97831
SMR:P97831 STRING:P97831 PhosphoSite:P97831
Ensembl:ENSRNOT00000027597 GeneID:59327 KEGG:rno:59327
InParanoid:P97831 NextBio:611925 Genevestigator:P97831
GermOnline:ENSRNOG00000020355 Uniprot:P97831
Length = 160
Score = 87 (35.7 bits), Expect = 0.00056, P = 0.00056
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 108
>UNIPROTKB|O13125 [details] [associations]
symbol:atoh7-a "Protein atonal homolog 7-A" species:8355
"Xenopus laevis" [GO:0048663 "neuron fate commitment" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:U93170
RefSeq:NP_001079289.1 UniGene:Xl.176 ProteinModelPortal:O13125
GeneID:378576 KEGG:xla:378576 CTD:378576 Xenbase:XB-GENE-6252646
HOVERGEN:HBG096161 GO:GO:0048663 Uniprot:O13125
Length = 138
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 8 KRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLS 55
KRR AN +ERRR Q +N AF LR+ +P E + + + LS
Sbjct: 33 KRRLAANARERRRMQGLNTAFDSLRKVVPQWGEDKQLSKYETLQMALS 80
>ZFIN|ZDB-GENE-050208-498 [details] [associations]
symbol:si:ch211-246m6.4 "si:ch211-246m6.4"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-050208-498
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:BX649296
GeneTree:ENSGT00690000101643 RefSeq:XP_001340709.1
Ensembl:ENSDART00000140323 GeneID:100000527 Uniprot:K7DYE4
Length = 193
Score = 89 (36.4 bits), Expect = 0.00059, P = 0.00059
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 6 VVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHRKN 63
V K+R AN +ER RT S+N AF+ LR IP + I+ + S++ SH N
Sbjct: 81 VSKQRQAANARERDRTHSVNTAFTSLRTLIPTEPADRKLSKIETLRL-ASSYISHLAN 137
>FB|FBgn0037475 [details] [associations]
symbol:Fer1 "48 related 1" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:AE014297 GO:GO:0006355
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GeneTree:ENSGT00680000099574 eggNOG:NOG288112 KO:K09073
ChiTaRS:Fer1HCH EMBL:AY089664 EMBL:BT029276 RefSeq:NP_996177.1
UniGene:Dm.21644 SMR:Q9VI67 EnsemblMetazoa:FBtr0081567
GeneID:2768661 KEGG:dme:Dmel_CG33323 UCSC:CG33323-RA CTD:2768661
FlyBase:FBgn0037475 InParanoid:Q9VI67 OMA:GFNSDQE OrthoDB:EOG4Z08NN
GenomeRNAi:2768661 NextBio:847973 Uniprot:Q9VI67
Length = 251
Score = 91 (37.1 bits), Expect = 0.00064, P = 0.00064
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLS 55
++ ++R AN +ERRR QSIN AF LR IP + + +D K +S
Sbjct: 78 QMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAIS 128
>ZFIN|ZDB-GENE-000210-7 [details] [associations]
symbol:twist3 "twist3" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-000210-7 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOVERGEN:HBG019071 InterPro:IPR015789
PANTHER:PTHR23349:SF6 EMBL:AF205258 IPI:IPI00504570 UniGene:Dr.8299
ProteinModelPortal:Q9PTE4 InParanoid:Q9PTE4 ArrayExpress:Q9PTE4
Uniprot:Q9PTE4
Length = 199
Score = 89 (36.4 bits), Expect = 0.00064, P = 0.00064
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N+AF+ LR+ IP L +D + I K
Sbjct: 106 QRVIANVRERQRTQSLNDAFASLRKIIPT-LSSDKLSKIQILK 147
>ZFIN|ZDB-GENE-050417-357 [details] [associations]
symbol:twist1b "twist1b" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IGI]
[GO:0030500 "regulation of bone mineralization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
ZFIN:ZDB-GENE-050417-357 GO:GO:0030500 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009953 GeneTree:ENSGT00690000101840
HOVERGEN:HBG019071 InterPro:IPR015789 PANTHER:PTHR23349:SF6
eggNOG:NOG258515 KO:K09069 HOGENOM:HOG000261629 OrthoDB:EOG434W7J
EMBL:CU855688 EMBL:BC092796 EMBL:EF620930 IPI:IPI00835208
IPI:IPI00932045 RefSeq:NP_001017820.1 RefSeq:XP_003200219.1
UniGene:Dr.90894 Ensembl:ENSDART00000052927 GeneID:100535497
GeneID:550518 KEGG:dre:100535497 KEGG:dre:550518 CTD:550518
InParanoid:Q568M7 OMA:RSSKKNG NextBio:20879760 Uniprot:Q568M7
Length = 169
Score = 87 (35.7 bits), Expect = 0.00068, P = 0.00068
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFK 51
+R AN +ER+RTQS+N AF+ LR+ IP L +D + I K
Sbjct: 76 QRVMANVRERQRTQSLNEAFAALRKIIPT-LPSDKLSKIQTLK 117
>UNIPROTKB|P59101 [details] [associations]
symbol:SCX "Basic helix-loop-helix transcription factor
scleraxis" species:9031 "Gallus gallus" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0061056 "sclerotome development" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0071773 "cellular response to BMP stimulus"
evidence=IEP] [GO:0035989 "tendon development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0044344 GO:GO:0003677
GO:GO:0006351 GO:GO:0071773 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0061056 EMBL:AF505881 IPI:IPI00602902 RefSeq:NP_989584.1
UniGene:Gga.49818 ProteinModelPortal:P59101 GeneID:374101
KEGG:gga:374101 CTD:20289 HOVERGEN:HBG036149 NextBio:20813620
GO:GO:0035989 Uniprot:P59101
Length = 187
Score = 88 (36.0 bits), Expect = 0.00070, P = 0.00070
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHRKN 63
R ++R+TAN +ER RT S+N AF+ LR IP + I+ + S++ SH N
Sbjct: 64 REPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRL-ASSYISHLGN 121
>UNIPROTKB|A7VJR9 [details] [associations]
symbol:Scx "Scleraxis" species:9796 "Equus caballus"
[GO:0001707 "mesoderm formation" evidence=ISS] [GO:0001894 "tissue
homeostasis" evidence=ISS] [GO:0001958 "endochondral ossification"
evidence=ISS] [GO:0002062 "chondrocyte differentiation"
evidence=ISS] [GO:0003179 "heart valve morphogenesis" evidence=ISS]
[GO:0003188 "heart valve formation" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=ISS]
[GO:0030199 "collagen fibril organization" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0032967
"positive regulation of collagen biosynthetic process"
evidence=ISS] [GO:0035989 "tendon development" evidence=ISS]
[GO:0035990 "tendon cell differentiation" evidence=ISS] [GO:0035992
"tendon formation" evidence=ISS] [GO:0035993 "deltoid tuberosity
development" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] [GO:0060008 "Sertoli cell differentiation"
evidence=ISS] [GO:0061035 "regulation of cartilage development"
evidence=ISS] [GO:0061036 "positive regulation of cartilage
development" evidence=ISS] [GO:0070888 "E-box binding"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0043066 GO:GO:0008284 GO:GO:0043565
GO:GO:0030199 GO:GO:0032967 GO:GO:0045944 GO:GO:0006351
GO:GO:0005667 GO:GO:0001894 GO:GO:0030509 GO:GO:0001707
GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0002062
GO:GO:0070888 GO:GO:0061036 GO:GO:0035993 GO:GO:0001958
GO:GO:0035990 GO:GO:0060008 GO:GO:2000543 CTD:20289
HOVERGEN:HBG036149 GO:GO:0003188 EMBL:AB254030
RefSeq:NP_001098620.1 UniGene:Eca.16116 ProteinModelPortal:A7VJR9
GeneID:100125857 KEGG:ecb:100125857 Uniprot:A7VJR9
Length = 200
Score = 88 (36.0 bits), Expect = 0.00084, P = 0.00084
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHRKN 63
R ++R+TAN +ER RT S+N AF+ LR IP + I+ + S++ SH N
Sbjct: 70 REPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRL-ASSYISHLGN 127
>UNIPROTKB|Q7RTU7 [details] [associations]
symbol:SCXA "Basic helix-loop-helix transcription factor
scleraxis" species:9606 "Homo sapiens" [GO:0003179 "heart valve
morphogenesis" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS;IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0061036 "positive regulation of cartilage
development" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0001707 "mesoderm formation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0070888 "E-box binding" evidence=IDA] [GO:0003188 "heart valve
formation" evidence=ISS] [GO:0030199 "collagen fibril organization"
evidence=ISS] [GO:0061035 "regulation of cartilage development"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=ISS]
[GO:0001894 "tissue homeostasis" evidence=ISS] [GO:0060008 "Sertoli
cell differentiation" evidence=ISS] [GO:0001958 "endochondral
ossification" evidence=ISS] [GO:0002062 "chondrocyte
differentiation" evidence=ISS] [GO:0030509 "BMP signaling pathway"
evidence=ISS] [GO:0035989 "tendon development" evidence=ISS]
[GO:0035992 "tendon formation" evidence=ISS] [GO:0035993 "deltoid
tuberosity development" evidence=ISS] [GO:0035990 "tendon cell
differentiation" evidence=ISS] [GO:0043425 "bHLH transcription
factor binding" evidence=IPI] [GO:0032967 "positive regulation of
collagen biosynthetic process" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0045892
GO:GO:0043066 GO:GO:0071560 GO:GO:0008284 GO:GO:0043565
GO:GO:0030199 GO:GO:0032967 GO:GO:0045944 GO:GO:0006351
GO:GO:0005667 GO:GO:0001894 GO:GO:0030509 GO:GO:0071773
GO:GO:0001707 GO:GO:0046982 GO:GO:0071260 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0002062 GO:GO:0060325 GO:GO:0070888
GO:GO:0048706 GO:GO:0061036 GO:GO:0035993 GO:GO:0001958
GO:GO:0035990 GO:GO:0060008 GO:GO:2000543 EMBL:AC110280
GO:GO:0061056 HOVERGEN:HBG036149 EMBL:AC145291 EMBL:BK000280
IPI:IPI00394929 RefSeq:NP_001008272.1 RefSeq:NP_001073983.1
UniGene:Hs.553250 UniGene:Hs.723088 ProteinModelPortal:Q7RTU7
SMR:Q7RTU7 STRING:Q7RTU7 PhosphoSite:Q7RTU7 PRIDE:Q7RTU7
Ensembl:ENST00000340210 Ensembl:ENST00000340695 GeneID:100129885
GeneID:642658 KEGG:hsa:100129885 KEGG:hsa:642658 UCSC:uc003zbn.2
CTD:100129885 CTD:642658 GeneCards:GC08P145397
GeneCards:GC08P145490 HGNC:HGNC:24312 HGNC:HGNC:32322 HPA:HPA043183
MIM:609067 neXtProt:NX_Q7RTU7 PharmGKB:PA142670943 eggNOG:NOG288076
HOGENOM:HOG000231706 InParanoid:Q7RTU7 OMA:GSDEKPC
OrthoDB:EOG4ZPDWJ PhylomeDB:Q7RTU7 NextBio:20789216 Bgee:Q7RTU7
CleanEx:HS_SCXA Genevestigator:Q7RTU7 GO:GO:0003188 Uniprot:Q7RTU7
Length = 201
Score = 88 (36.0 bits), Expect = 0.00085, P = 0.00085
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHRKN 63
R ++R+TAN +ER RT S+N AF+ LR IP + I+ + S++ SH N
Sbjct: 72 REPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRL-ASSYISHLGN 129
>MGI|MGI:102934 [details] [associations]
symbol:Scx "scleraxis" species:10090 "Mus musculus"
[GO:0001707 "mesoderm formation" evidence=IMP] [GO:0001894 "tissue
homeostasis" evidence=IMP] [GO:0001958 "endochondral ossification"
evidence=IMP] [GO:0002062 "chondrocyte differentiation"
evidence=IMP] [GO:0003179 "heart valve morphogenesis" evidence=IMP]
[GO:0003188 "heart valve formation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0010628 "positive regulation of gene expression"
evidence=IDA;IMP] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0030199 "collagen fibril organization" evidence=IMP]
[GO:0030509 "BMP signaling pathway" evidence=IMP] [GO:0032967
"positive regulation of collagen biosynthetic process"
evidence=IDA;IMP] [GO:0035914 "skeletal muscle cell
differentiation" evidence=IMP] [GO:0035989 "tendon development"
evidence=IMP] [GO:0035990 "tendon cell differentiation"
evidence=IMP] [GO:0035992 "tendon formation" evidence=IMP]
[GO:0035993 "deltoid tuberosity development" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO;IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=NAS]
[GO:0061035 "regulation of cartilage development" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=IMP] [GO:0070888 "E-box binding" evidence=IDA] [GO:2000543
"positive regulation of gastrulation" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
MGI:MGI:102934 GO:GO:0045892 GO:GO:0043066 GO:GO:0071560
GO:GO:0008284 GO:GO:0043565 GO:GO:0030199 GO:GO:0032967
GO:GO:0045944 GO:GO:0006351 GO:GO:0005667 GO:GO:0001894
GO:GO:0030509 GO:GO:0071773 GO:GO:0001707 GO:GO:0071260
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0002062 GO:GO:0035914
GO:GO:0060325 GO:GO:0070888 GO:GO:0048706 GO:GO:0061036
GO:GO:0035993 GO:GO:0001958 GO:GO:0035990 GO:GO:0060008
GO:GO:2000543 GeneTree:ENSGT00690000101643 GO:GO:0061056 CTD:20289
HOVERGEN:HBG036149 eggNOG:NOG288076 HOGENOM:HOG000231706
OMA:GSDEKPC OrthoDB:EOG4ZPDWJ GO:GO:0003188 EMBL:S78079
IPI:IPI00381245 RefSeq:NP_942588.1 UniGene:Mm.322821
ProteinModelPortal:Q64124 SMR:Q64124 STRING:Q64124
PhosphoSite:Q64124 PRIDE:Q64124 Ensembl:ENSMUST00000043089
GeneID:20289 KEGG:mmu:20289 InParanoid:Q64124 NextBio:297999
Bgee:Q64124 CleanEx:MM_SCX Genevestigator:Q64124
GermOnline:ENSMUSG00000034161 Uniprot:Q64124
Length = 207
Score = 88 (36.0 bits), Expect = 0.00091, P = 0.00091
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHRKN 63
R ++R+TAN +ER RT S+N AF+ LR IP + I+ + S++ SH N
Sbjct: 75 REPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRL-ASSYISHLGN 132
>WB|WBGene00003018 [details] [associations]
symbol:lin-32 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0048666 "neuron development" evidence=IGI;IMP] [GO:0051179
"localization" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IGI;IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0009792 GO:GO:0043565 GO:GO:0048666
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG267878
GeneTree:ENSGT00680000099574 GO:GO:0045138 KO:K09083 GO:GO:0051179
EMBL:FO081076 EMBL:U15418 PIR:T29378 RefSeq:NP_508410.2
UniGene:Cel.662 ProteinModelPortal:Q10574 SMR:Q10574 IntAct:Q10574
STRING:Q10574 EnsemblMetazoa:T14F9.5 GeneID:191703
KEGG:cel:CELE_T14F9.5 UCSC:T14F9.5 CTD:191703 WormBase:T14F9.5
HOGENOM:HOG000020160 InParanoid:Q10574 OMA:CRRYKTP NextBio:950028
Uniprot:Q10574
Length = 142
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 9 RRNTANKKERRRTQSINNAFSDLRECIPNI 38
RR+ AN++ERRR ++N A+ +LRE +P I
Sbjct: 73 RRSAANERERRRMNTLNVAYDELREVLPEI 102
>RGD|1588254 [details] [associations]
symbol:Scx "scleraxis" species:10116 "Rattus norvegicus"
[GO:0001707 "mesoderm formation" evidence=IEA;ISO] [GO:0001894
"tissue homeostasis" evidence=IEA;ISO] [GO:0001958 "endochondral
ossification" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=IEA;ISO] [GO:0003179 "heart valve
morphogenesis" evidence=ISO] [GO:0003188 "heart valve formation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA;ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030199 "collagen fibril
organization" evidence=IEA;ISO] [GO:0030509 "BMP signaling pathway"
evidence=IEA;ISO] [GO:0032967 "positive regulation of collagen
biosynthetic process" evidence=IEA;ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=ISO] [GO:0035989 "tendon
development" evidence=ISO] [GO:0035990 "tendon cell
differentiation" evidence=IEA;ISO] [GO:0035992 "tendon formation"
evidence=ISO] [GO:0035993 "deltoid tuberosity development"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043425 "bHLH transcription factor
binding" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0060325
"face morphogenesis" evidence=IEA] [GO:0061035 "regulation of
cartilage development" evidence=ISO] [GO:0061036 "positive
regulation of cartilage development" evidence=IEA;ISO] [GO:0061056
"sclerotome development" evidence=IEA] [GO:0070888 "E-box binding"
evidence=IEA;ISO] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0071773
"cellular response to BMP stimulus" evidence=IEA] [GO:2000543
"positive regulation of gastrulation" evidence=IEA;ISO]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:1588254 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CH473950
GeneTree:ENSGT00690000101643 CTD:20289 OMA:GSDEKPC
RefSeq:NP_001123980.1 UniGene:Rn.198233 Ensembl:ENSRNOT00000029768
GeneID:680712 KEGG:rno:680712 NextBio:719338 Uniprot:G3V8X3
Length = 209
Score = 88 (36.0 bits), Expect = 0.00093, P = 0.00093
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 5 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNILETDDIISIDDFKADLSNHSSHRKN 63
R ++R+TAN +ER RT S+N AF+ LR IP + I+ + S++ SH N
Sbjct: 75 REPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRL-ASSYISHLGN 132
>ZFIN|ZDB-GENE-990415-17 [details] [associations]
symbol:atoh1a "atonal homolog 1a" species:7955
"Danio rerio" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048919 "posterior lateral line neuromast
development" evidence=IMP] [GO:0048839 "inner ear development"
evidence=IMP] [GO:0042668 "auditory receptor cell fate
determination" evidence=IMP] [GO:0042491 "auditory receptor cell
differentiation" evidence=IGI;IMP] [GO:0048884 "neuromast
development" evidence=IMP] [GO:0048923 "posterior lateral line
neuromast hair cell differentiation" evidence=IMP] [GO:0035675
"neuromast hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-990415-17
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG050609 GO:GO:0042668
GO:GO:0048923 EMBL:BC117598 IPI:IPI00495284 UniGene:Dr.566
ProteinModelPortal:Q1ED07 InParanoid:Q1ED07 ArrayExpress:Q1ED07
GO:GO:0035675 Uniprot:Q1ED07
Length = 292
Score = 79 (32.9 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 8 KRRNTANKKERRRTQSINNAFSDLRECIP 36
+RR AN +ERRR +N+AF +LR IP
Sbjct: 118 QRRMAANARERRRMHGLNHAFDELRSVIP 146
Score = 29 (15.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 37 NILETD 42
N+LETD
Sbjct: 192 NVLETD 197
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 86 75 0.00091 102 3 11 22 0.38 29
29 0.47 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 456 (49 KB)
Total size of DFA: 84 KB (2066 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.01u 0.07s 10.08t Elapsed: 00:00:06
Total cpu time: 10.02u 0.07s 10.09t Elapsed: 00:00:06
Start: Thu Aug 15 13:33:13 2013 End: Thu Aug 15 13:33:19 2013