Query psy2856
Match_columns 136
No_of_seqs 136 out of 1085
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 18:38:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2856.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2856hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.9 2.1E-20 7.2E-25 105.5 12.3 112 16-136 1-113 (135)
2 4d90_A EGF-like repeat and dis 99.8 1.5E-17 5E-22 94.8 10.6 108 21-136 1-127 (143)
3 1yo8_A Thrombospondin-2; EGF, 99.7 3.7E-17 1.3E-21 111.2 11.1 115 18-136 1-138 (634)
4 1z1y_A Ookinete surface protei 99.7 7.2E-18 2.4E-22 100.0 6.0 115 15-136 39-169 (186)
5 2bou_A EGF-like module contain 99.7 4.2E-17 1.4E-21 92.8 8.4 106 27-136 7-128 (143)
6 1uzk_A Fibrillin-1; glycoprote 99.7 2E-17 6.9E-22 96.0 2.9 115 18-136 1-153 (162)
7 1dx5_I Thrombomodulin; serine 99.7 3.1E-17 1.1E-21 90.3 3.3 106 18-136 2-109 (118)
8 1z1y_A Ookinete surface protei 99.6 1.3E-16 4.4E-21 94.5 3.3 107 26-136 10-125 (186)
9 2w86_A Fibrillin-1, fibrillin1 99.5 2.4E-16 8.1E-21 90.1 -0.8 113 18-136 2-138 (147)
10 2bou_A EGF-like module contain 99.5 2.8E-14 9.7E-19 81.1 6.4 94 14-109 38-142 (143)
11 1emn_A Fibrillin; extracellula 99.5 3.6E-14 1.2E-18 73.2 6.0 77 16-98 1-77 (82)
12 1aut_L Activated protein C; se 99.5 6.3E-13 2.2E-17 72.7 8.0 98 16-121 2-107 (114)
13 1x7a_L Coagulation factor IX, 99.4 4E-13 1.4E-17 76.4 7.0 88 14-109 42-130 (146)
14 2vj3_A Neurogenic locus notch 99.4 2.7E-12 9.2E-17 72.2 9.1 87 16-112 40-127 (135)
15 1lmj_A Fibrillin 1; EGF, calci 99.4 1.2E-12 4.3E-17 68.0 5.2 78 19-100 2-82 (86)
16 1emn_A Fibrillin; extracellula 99.3 5.1E-12 1.7E-16 65.0 6.7 72 58-136 2-74 (82)
17 1z6c_A Vitamin K-dependent pro 99.3 8.7E-13 3E-17 68.7 3.6 72 19-97 2-77 (87)
18 1nfu_B Coagulation factor XA, 99.3 1.5E-12 5.3E-17 77.0 3.7 85 15-107 37-123 (195)
19 1lmj_A Fibrillin 1; EGF, calci 99.3 8.1E-12 2.8E-16 64.9 5.9 73 60-136 2-77 (86)
20 1yo8_A Thrombospondin-2; EGF, 99.3 2.2E-11 7.4E-16 83.3 9.3 93 15-112 39-156 (634)
21 2c4f_L Coagulation factor VII 99.3 6.7E-12 2.3E-16 71.2 5.6 89 15-108 42-132 (142)
22 2vh0_B Activated factor XA lig 99.3 2.9E-12 1E-16 71.9 3.7 85 15-107 37-123 (134)
23 3h5c_B Vitamin K-dependent pro 99.3 2.6E-11 8.9E-16 77.3 8.0 87 18-110 3-89 (317)
24 4d90_A EGF-like repeat and dis 99.2 6.5E-11 2.2E-15 67.2 7.0 77 17-100 49-132 (143)
25 1tpg_A T-plasminogen activator 99.2 3E-11 1E-15 63.3 4.7 76 41-136 1-80 (91)
26 2w2n_E LDL receptor, low-densi 99.2 4.6E-12 1.6E-16 68.3 1.2 78 14-99 24-102 (107)
27 1x7a_L Coagulation factor IX, 99.2 4E-11 1.4E-15 68.2 4.7 72 57-136 44-116 (146)
28 1z6c_A Vitamin K-dependent pro 99.1 2.8E-11 9.5E-16 63.0 3.3 71 60-135 2-74 (87)
29 2w2n_E LDL receptor, low-densi 99.1 1.3E-10 4.4E-15 62.7 3.4 70 60-136 28-98 (107)
30 3p5b_L Low density lipoprotein 99.0 4E-10 1.4E-14 74.0 6.3 80 21-106 1-80 (400)
31 1nfu_B Coagulation factor XA, 99.0 6.7E-11 2.3E-15 70.0 1.3 72 57-136 38-111 (195)
32 1aut_L Activated protein C; se 99.0 9.8E-10 3.4E-14 59.9 5.2 63 73-136 22-84 (114)
33 3p5b_L Low density lipoprotein 99.0 1.5E-09 5E-14 71.3 6.6 61 73-136 8-69 (400)
34 3v65_B Low-density lipoprotein 98.9 3.7E-10 1.3E-14 73.8 2.9 83 19-107 2-85 (386)
35 3m0c_C LDL receptor, low-densi 98.9 3.4E-09 1.2E-13 74.9 7.6 57 77-135 324-380 (791)
36 2vh0_B Activated factor XA lig 98.9 2.2E-10 7.5E-15 64.3 1.3 72 57-136 38-111 (134)
37 2c4f_L Coagulation factor VII 98.9 2.3E-09 7.8E-14 60.7 5.2 72 58-136 44-119 (142)
38 3v65_B Low-density lipoprotein 98.8 7.5E-10 2.6E-14 72.4 1.4 69 61-135 3-72 (386)
39 3h5c_B Vitamin K-dependent pro 98.8 7.6E-09 2.6E-13 66.0 5.5 66 60-135 4-73 (317)
40 2vj2_A Jagged-1; signalling, p 98.8 7.5E-09 2.6E-13 60.3 3.8 86 32-136 76-163 (169)
41 1n7d_A LDL receptor, low-densi 98.7 3.5E-08 1.2E-12 69.1 7.5 57 77-136 306-363 (699)
42 1edm_B Factor IX; epidermal gr 98.7 4.1E-08 1.4E-12 43.0 4.1 35 19-54 2-36 (39)
43 1tpg_A T-plasminogen activator 98.7 7.3E-08 2.5E-12 50.3 5.7 56 35-99 25-84 (91)
44 3m0c_C LDL receptor, low-densi 98.7 4.1E-08 1.4E-12 69.5 5.8 72 33-109 324-395 (791)
45 4fbr_A Lectin, myxobacterial h 98.6 6.6E-11 2.3E-15 72.8 -8.6 105 28-136 39-196 (267)
46 1n7d_A LDL receptor, low-densi 98.5 2.2E-07 7.5E-12 65.1 6.6 81 19-106 293-374 (699)
47 1uzk_A Fibrillin-1; glycoprote 98.5 3.7E-08 1.3E-12 57.0 2.0 72 60-135 2-83 (162)
48 1dx5_I Thrombomodulin; serine 98.5 6.4E-08 2.2E-12 53.0 2.5 59 33-97 53-111 (118)
49 1edm_B Factor IX; epidermal gr 98.4 3.6E-07 1.2E-11 39.9 4.0 32 105-136 2-33 (39)
50 3fcs_B Integrin beta-3; beta p 98.4 1.1E-07 3.6E-12 66.3 3.1 102 22-135 436-553 (690)
51 4fbr_A Lectin, myxobacterial h 98.4 7.7E-11 2.6E-15 72.5 -11.0 115 16-136 95-263 (267)
52 1egf_A Epidermal growth factor 98.4 1.2E-06 4E-11 40.9 5.3 37 19-55 2-42 (53)
53 3u7u_G Neuregulin 1; signaling 98.4 4.7E-07 1.6E-11 42.5 3.8 38 18-56 6-48 (55)
54 2gy5_A Angiopoietin-1 receptor 98.2 6.2E-06 2.1E-10 54.6 7.2 99 28-136 204-314 (423)
55 2k2s_B Micronemal protein 6; m 98.2 1.7E-07 5.9E-12 44.9 -0.3 37 17-54 8-47 (61)
56 1apq_A Complement protease C1R 98.2 2.6E-06 9E-11 39.7 3.7 35 18-54 2-45 (53)
57 2kl7_A Fibulin-4; secreted, ca 98.1 2.4E-06 8.2E-11 42.4 3.4 36 18-53 1-38 (71)
58 2ygq_A WIF-1, WNT inhibitory f 98.1 8.6E-06 2.9E-10 52.1 6.7 85 27-135 153-237 (324)
59 1kli_L Factor VIIA; extrinsic 98.1 2.2E-06 7.7E-11 42.2 2.6 46 18-65 3-51 (69)
60 2jkh_L Factor X light chain; p 98.1 2.9E-06 9.8E-11 39.9 2.7 43 21-65 2-46 (55)
61 1apq_A Complement protease C1R 98.0 6.1E-06 2.1E-10 38.4 3.6 32 105-136 3-42 (53)
62 1a3p_A Epidermal growth factor 98.0 1.2E-05 4.1E-10 36.1 4.3 28 28-55 10-39 (45)
63 2k2s_B Micronemal protein 6; m 98.0 1.3E-06 4.3E-11 41.9 0.8 34 103-136 8-43 (61)
64 3fcs_B Integrin beta-3; beta p 98.0 1.1E-05 3.9E-10 56.3 5.8 92 28-136 494-594 (690)
65 3u7u_G Neuregulin 1; signaling 98.0 6.1E-06 2.1E-10 38.7 3.1 32 104-135 6-42 (55)
66 2ygq_A WIF-1, WNT inhibitory f 98.0 9.8E-06 3.4E-10 51.9 4.8 56 28-98 186-241 (324)
67 1egf_A Epidermal growth factor 98.0 1.1E-05 3.8E-10 37.5 3.8 32 105-136 2-38 (53)
68 1kli_L Factor VIIA; extrinsic 98.0 1.7E-05 5.8E-10 39.0 4.4 48 59-110 3-51 (69)
69 2w86_A Fibrillin-1, fibrillin1 98.0 2.2E-06 7.4E-11 48.7 1.3 57 42-101 88-144 (147)
70 2jkh_L Factor X light chain; p 97.9 1.8E-05 6E-10 37.2 4.0 34 77-110 13-46 (55)
71 1hae_A Heregulin-alpha; growth 97.8 7.9E-06 2.7E-10 39.5 2.0 41 21-64 7-52 (63)
72 1k36_A Epiregulin; EGF-like fo 97.8 1.4E-05 4.9E-10 36.0 2.7 36 19-55 2-41 (46)
73 1gl4_A Nidogen-1, entactin; im 97.8 3.2E-06 1.1E-10 52.7 0.5 45 18-63 3-48 (285)
74 2vj2_A Jagged-1; signalling, p 97.8 2.1E-05 7.2E-10 45.7 3.7 61 29-98 105-166 (169)
75 2kl7_A Fibulin-4; secreted, ca 97.7 1.8E-05 6.2E-10 39.2 2.4 26 105-130 2-29 (71)
76 1kig_L Factor XA; glycoprotein 97.6 0.0001 3.6E-09 33.9 3.6 33 77-109 10-42 (51)
77 2bz6_L Blood coagulation facto 97.5 0.00018 6.1E-09 33.4 3.9 34 77-110 11-45 (53)
78 1kig_L Factor XA; glycoprotein 97.5 6.1E-05 2.1E-09 34.7 2.2 33 32-64 9-42 (51)
79 1a3p_A Epidermal growth factor 97.5 0.00015 5.1E-09 32.4 3.3 28 108-135 2-34 (45)
80 2bz6_L Blood coagulation facto 97.3 0.00015 5.1E-09 33.6 2.4 34 32-65 10-45 (53)
81 1n1i_A Merozoite surface prote 97.3 0.0013 4.5E-08 34.6 6.0 65 28-95 17-84 (105)
82 1k36_A Epiregulin; EGF-like fo 97.3 0.00013 4.5E-09 32.8 2.0 31 105-136 2-37 (46)
83 1n1i_A Merozoite surface prote 97.2 0.0061 2.1E-07 32.1 8.0 61 73-135 18-83 (105)
84 1nql_B Epidermal growth factor 97.2 0.00017 5.9E-09 33.4 1.7 31 26-56 11-43 (53)
85 2gy5_A Angiopoietin-1 receptor 97.2 0.00067 2.3E-08 45.1 5.1 79 43-136 186-272 (423)
86 3k6s_B Integrin beta-2; cell r 97.1 0.00043 1.5E-08 48.6 3.5 93 28-136 483-586 (687)
87 2wph_E Coagulation factor IXA 97.1 0.0023 7.9E-08 30.3 5.1 33 76-108 10-43 (59)
88 3k6s_B Integrin beta-2; cell r 97.0 0.00054 1.9E-08 48.1 3.7 92 28-136 436-547 (687)
89 1hae_A Heregulin-alpha; growth 97.0 0.00023 7.8E-09 34.3 1.3 30 106-135 6-40 (63)
90 2p28_B Integrin beta-2; hybrid 97.0 0.0024 8.2E-08 38.6 6.0 92 28-135 97-207 (217)
91 1ob1_C Major merozoite surface 97.0 0.0013 4.3E-08 34.4 3.9 66 27-95 10-83 (99)
92 2wph_E Coagulation factor IXA 96.8 0.00069 2.3E-08 32.1 2.0 22 115-136 8-30 (59)
93 1szb_A Mannose binding lectin- 96.8 0.002 6.9E-08 37.3 4.4 37 16-54 120-160 (170)
94 1nzi_A Complement C1S componen 96.8 0.0027 9.2E-08 36.3 4.6 39 16-54 113-151 (159)
95 1g1s_A P-selectin; selectin, l 96.8 0.00068 2.3E-08 38.9 2.1 41 21-65 120-160 (162)
96 3ca7_A Protein spitz; argos, E 96.7 0.00088 3E-08 30.8 2.0 29 27-55 14-46 (52)
97 1q4g_A Prostaglandin G/H synth 96.7 0.00099 3.4E-08 45.7 2.6 36 20-56 2-39 (553)
98 1ob1_C Major merozoite surface 96.7 0.0081 2.8E-07 31.4 5.4 61 73-135 12-82 (99)
99 1szb_A Mannose binding lectin- 96.6 0.0024 8.3E-08 36.9 3.5 33 103-135 121-156 (170)
100 3nt1_A Prostaglandin-endoperox 96.5 0.0025 8.5E-08 44.1 3.5 36 20-56 1-38 (587)
101 1gl4_A Nidogen-1, entactin; im 96.4 0.0015 5.2E-08 40.9 1.9 46 59-108 3-48 (285)
102 2wg3_C Hedgehog-interacting pr 96.3 0.00059 2E-08 45.9 -0.0 72 43-136 378-449 (463)
103 3f1s_B Vitamin K-dependent pro 96.0 0.0065 2.2E-07 38.1 3.3 47 19-65 1-48 (283)
104 3v64_C Agrin; beta propeller, 95.9 0.004 1.4E-07 40.2 2.4 40 20-61 1-41 (349)
105 3ltf_D Protein spitz; receptor 95.9 0.0036 1.2E-07 29.5 1.5 28 28-55 15-46 (58)
106 1nzi_A Complement C1S componen 95.5 0.019 6.6E-07 32.6 4.0 34 103-136 114-148 (159)
107 1g1s_A P-selectin; selectin, l 95.5 0.0068 2.3E-07 34.7 1.9 35 73-111 127-161 (162)
108 1nql_B Epidermal growth factor 95.4 0.0073 2.5E-07 27.8 1.6 24 112-135 12-37 (53)
109 3f1s_B Vitamin K-dependent pro 95.0 0.036 1.2E-06 34.7 4.2 35 76-110 14-48 (283)
110 2wg3_C Hedgehog-interacting pr 94.7 0.0093 3.2E-07 40.2 1.1 55 29-99 399-453 (463)
111 4aqs_A Laminin subunit beta-1; 93.8 0.023 7.9E-07 38.9 1.6 51 85-136 459-519 (525)
112 3cfw_A L-selectin; EGF, cell a 93.7 0.072 2.5E-06 30.4 3.3 29 27-55 125-153 (164)
113 2fd6_A Urokinase-type plasmino 93.2 0.1 3.6E-06 28.4 3.2 29 28-56 2-33 (122)
114 1g1t_A E-selectin; EGF, adhesi 93.0 0.039 1.3E-06 31.2 1.5 34 21-55 120-153 (157)
115 1q4g_A Prostaglandin G/H synth 92.9 0.1 3.5E-06 36.0 3.6 36 61-100 2-39 (553)
116 3asi_A Neurexin-1-alpha; beta- 92.8 0.15 5.2E-06 33.7 4.2 35 20-55 185-220 (410)
117 3zyj_B Netrin-G1; cell adhesio 92.7 0.047 1.6E-06 36.3 1.7 27 33-59 304-330 (426)
118 3v64_C Agrin; beta propeller, 92.6 0.12 4.2E-06 33.3 3.5 32 76-107 11-42 (349)
119 4a0p_A LRP6, LRP-6, low-densit 91.8 0.11 3.8E-06 36.4 2.7 31 105-135 264-295 (628)
120 2fd6_A Urokinase-type plasmino 91.6 0.87 3E-05 24.7 5.6 28 73-100 3-33 (122)
121 2rnl_A Amphiregulin; AR, color 91.4 0.38 1.3E-05 21.8 3.4 37 18-55 7-47 (50)
122 3nt1_A Prostaglandin-endoperox 91.0 0.25 8.5E-06 34.5 3.7 35 62-100 2-38 (587)
123 1ijq_A LDL receptor, low-densi 90.7 0.21 7E-06 31.7 3.0 32 105-136 266-306 (316)
124 1xdt_R Hbegf, heparin-binding 90.6 0.15 5.2E-06 25.5 1.8 35 20-55 37-75 (79)
125 1iox_A Betacellulin; EGF-like 90.0 0.28 9.7E-06 22.1 2.4 28 27-55 14-43 (50)
126 3e50_C Protransforming growth 89.6 0.54 1.8E-05 21.3 3.1 28 27-55 14-43 (50)
127 4aqs_A Laminin subunit beta-1; 89.5 0.17 6E-06 34.6 2.0 54 41-98 459-522 (525)
128 3sov_A LRP-6, low-density lipo 89.2 0.37 1.3E-05 30.7 3.3 31 106-136 267-299 (318)
129 3cfw_A L-selectin; EGF, cell a 89.2 0.26 9.1E-06 28.0 2.4 28 109-136 122-149 (164)
130 4a0p_A LRP6, LRP-6, low-densit 88.9 0.35 1.2E-05 34.0 3.2 41 19-60 264-306 (628)
131 3s94_A LRP-6, low-density lipo 88.9 0.17 5.7E-06 35.5 1.6 30 106-135 578-607 (619)
132 2p28_B Integrin beta-2; hybrid 88.5 0.32 1.1E-05 29.4 2.5 62 27-99 143-212 (217)
133 1ijq_A LDL receptor, low-densi 87.3 0.7 2.4E-05 29.3 3.6 34 19-54 266-309 (316)
134 3asi_A Neurexin-1-alpha; beta- 87.3 0.64 2.2E-05 30.7 3.6 30 106-135 185-215 (410)
135 3qcw_A Neurexin-1-alpha; synap 86.8 0.66 2.3E-05 35.4 3.7 35 20-55 1017-1052(1245)
136 1b9w_A Protein (merozoite surf 86.0 2.4 8E-05 21.9 5.3 65 28-95 11-79 (95)
137 1g1t_A E-selectin; EGF, adhesi 86.0 0.21 7.2E-06 28.1 0.7 29 107-135 120-148 (157)
138 2ygo_A WIF-1, WNT inhibitory f 85.9 0.95 3.2E-05 26.7 3.3 26 27-55 153-178 (188)
139 3sov_A LRP-6, low-density lipo 84.2 1.5 5.3E-05 27.9 4.1 33 20-54 267-302 (318)
140 3qcw_A Neurexin-1-alpha; synap 83.6 0.91 3.1E-05 34.6 3.2 35 20-55 619-654 (1245)
141 2i9a_A Urokinase-type plasmino 82.2 1.7 5.7E-05 24.5 3.3 29 28-56 14-45 (145)
142 3fby_A COMP, cartilage oligome 76.6 2 6.8E-05 29.7 2.8 28 27-54 27-55 (551)
143 1klo_A Laminin; glycoprotein; 75.1 2.6 8.8E-05 24.1 2.7 31 28-58 2-35 (162)
144 3s94_A LRP-6, low-density lipo 73.1 3.6 0.00012 28.9 3.5 30 75-104 588-617 (619)
145 3ssb_I IMPI alpha, inducible m 70.1 1.7 5.9E-05 17.5 0.8 22 43-64 6-27 (32)
146 3dem_A Complement factor MAsp- 68.3 6.5 0.00022 24.4 3.6 31 105-135 120-153 (278)
147 1b9w_A Protein (merozoite surf 57.7 18 0.00062 18.7 6.3 61 73-135 12-78 (95)
148 1nt0_A MAsp2, mannose-binding 51.3 8.6 0.00029 24.0 2.0 31 105-135 119-152 (286)
149 1ccv_A AMCI, chymotrypsin inhi 34.9 10 0.00034 17.2 0.3 17 43-59 35-51 (56)
150 1hx2_A BSTI; beta-sheet disulf 31.1 28 0.00097 15.9 1.6 18 43-60 37-56 (60)
151 2p3f_N Anti-coagulant protein 28.4 14 0.00049 18.2 0.3 23 42-64 47-70 (78)
152 3fl7_A Ephrin receptor; ATP-bi 26.3 59 0.002 22.7 3.0 13 123-135 306-318 (536)
153 2h9e_C Anti-coagulant protein 20.8 15 0.0005 18.4 -0.6 22 43-64 49-70 (84)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.86 E-value=2.1e-20 Score=105.47 Aligned_cols=112 Identities=37% Similarity=0.880 Sum_probs=94.2
Q ss_pred eeeeCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCc
Q psy2856 16 VFVDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGY 94 (136)
Q Consensus 16 ~c~~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~ 94 (136)
+|.|+|+|.. .++|.+++.|+++.++|.|.|.+||.+..+. .++++|...+ |.....|+...+.|.|.|.+||
T Consensus 1 Sc~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~--~~~~~C~~~~----C~~~~~C~~~~g~~~C~C~~G~ 74 (135)
T 2vj3_A 1 SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE--IDVNECVSNP----CQNDATCLDQIGEFQCICMPGY 74 (135)
T ss_dssp --CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSC--EECCTTTTCC----CCSSCEEEECSSCEEEECCTTE
T ss_pred CCcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccc--ccCccCCCCC----CCCCCEEeCCCCCceeeCCCCC
Confidence 3679999984 4689999999999999999999999987543 4677887544 8888899999999999999999
Q ss_pred eeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 95 HGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 95 ~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
.+.... .++++|....|...+.|++..++|.|.|++||.
T Consensus 75 ~G~~C~---~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~ 113 (135)
T 2vj3_A 75 EGVHCE---VNTDECASSPCLHNGRCLDKINEFQCECPTGFT 113 (135)
T ss_dssp ESSSSC---EECCTTTTCCSTTTCEEEECSSCEEEECCTTEE
T ss_pred cCCcce---ecCCcccCCCcCCCCEeECCCCCeEEECCCCCc
Confidence 976543 378899888898889999999999999999983
No 2
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.76 E-value=1.5e-17 Score=94.77 Aligned_cols=108 Identities=28% Similarity=0.776 Sum_probs=82.2
Q ss_pred CCCCCCCCCCCCCeeeeCC--CCeEeeCCCCCccCCCCC----------cccCCcccCCCCCCCCCCCCeee-------e
Q psy2856 21 NECAHPNACGVNALCQNYP--GNYTCSCQPGYTGNPFEG----------CIDIDECQYASTHPVCGPGARCT-------N 81 (136)
Q Consensus 21 ~~c~~~~~~~~~~~C~~~~--g~~~C~c~~g~~~~~~~~----------c~~~~~c~~~~~~~~c~~~~~c~-------~ 81 (136)
|+|.. ++|.+++.|++.. ++|.|.|.+||.+..+.. |..+++|...+ |.+...|+ +
T Consensus 1 d~C~~-~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~----C~~~g~C~~~~~~~~~ 75 (143)
T 4d90_A 1 DICDP-NPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNP----CHNGGTCEISEAYRGD 75 (143)
T ss_dssp --CCS-CCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCC----CCTTCEEEECCCEETT
T ss_pred CcCCC-CcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCC----CCCCCEecCCCccccC
Confidence 46764 7899999999876 689999999999875421 12345565433 88888998 4
Q ss_pred cCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 82 FPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 82 ~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
..+.|.|.|..||.+..+. .++++|....|..++.|+++.++|.|.|++||.
T Consensus 76 ~~~~~~C~C~~G~~G~~C~---~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~ 127 (143)
T 4d90_A 76 TFIGYVCKCPRGFNGIHCQ---HNINECEVEPCKNGGICTDLVANYSCECPGEFM 127 (143)
T ss_dssp EECCEEEECCTTEESTTSC---EECCTTTTCCSCTTCEEEEETTEEEEECCTTCB
T ss_pred CCCCeEeECcCCCcCCCcc---cCCCcCCCCCCCCCCEeECCCCCeEeECCCCCc
Confidence 5578999999999876532 289999988899999999999999999999984
No 3
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.73 E-value=3.7e-17 Score=111.15 Aligned_cols=115 Identities=34% Similarity=0.877 Sum_probs=93.5
Q ss_pred eeCCCCCCCCCCCCCCeeeeCCC-CeEe-eCCCCCccCCCCCcccCCcccCCCCCCCCCCCC---eeeecCCCeeee-CC
Q psy2856 18 VDINECAHPNACGVNALCQNYPG-NYTC-SCQPGYTGNPFEGCIDIDECQYASTHPVCGPGA---RCTNFPGGYHCE-CP 91 (136)
Q Consensus 18 ~~~~~c~~~~~~~~~~~C~~~~g-~~~C-~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~---~c~~~~~~~~c~-c~ 91 (136)
.++++|. .++|.+++.|+++.+ +|.| .|++||.+.. ..|..+++|...+. .|.... .|++..++|.|. |.
T Consensus 1 ~DIDeC~-~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg-~~CeDiDEC~~~p~--~C~~gg~~~~CvNt~gsY~C~~C~ 76 (634)
T 1yo8_A 1 ADPDGCL-SNPCFPGAQCSSFPDGSWSCGFCPVGFLGNG-THCEDLDECALVPD--ICFSTSKVPRCVNTQPGFHCLPCP 76 (634)
T ss_dssp ---CGGG-GCCSCTTCCEEECTTSCEEECCCCTTBCSCS-SSCCBCCTTTTSCC--CSCCCSSSCCEEECSSSEEECCCC
T ss_pred CcccccC-CCCCCCCCEEecCCCCCeECCcCCCccCCCC-CCccccccccCCCC--cccCCccccceeeccCceecccCC
Confidence 3688997 489999999999985 5999 9999999854 35888999975432 377776 899999999998 99
Q ss_pred CCceeCCCC-----------cceeeCCCCCCC--CCCCCCeeeecC----CCeeEeCCCCCC
Q psy2856 92 PGYHGDAFT-----------TGCVDADECVNR--PCGKDALCSNVD----GSYTCTCPPGFR 136 (136)
Q Consensus 92 ~g~~~~~~~-----------~~~~~~~~c~~~--~~~~~~~c~~~~----g~~~c~C~~g~~ 136 (136)
+||.+.... ..|.++++|... .|...+.|+++. ++|.|.|++||.
T Consensus 77 ~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~ 138 (634)
T 1yo8_A 77 PRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYA 138 (634)
T ss_dssp TTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEE
T ss_pred CCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCcc
Confidence 999987643 348899999864 788889999998 999999999983
No 4
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.73 E-value=7.2e-18 Score=99.95 Aligned_cols=115 Identities=32% Similarity=0.735 Sum_probs=92.8
Q ss_pred eeeeeCCCCCC---CCCCCCCCeeeeCC-----CCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeee----ec
Q psy2856 15 VVFVDINECAH---PNACGVNALCQNYP-----GNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCT----NF 82 (136)
Q Consensus 15 ~~c~~~~~c~~---~~~~~~~~~C~~~~-----g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~----~~ 82 (136)
..|.++++|.. ..+|.+.+.|+++. ++|.|.|.+||.+... .|. +++|...+ |...+.|+ ..
T Consensus 39 ~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~-~C~-~d~C~~~~----C~~~g~C~~~~~~~ 112 (186)
T 1z1y_A 39 NTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED-TCV-LDVCQYXN----CGESGECIVEYLSE 112 (186)
T ss_dssp TEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT-EEE-EGGGTTCC----CCTTEEEEEEEETT
T ss_pred CccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC-CCC-CCcCcCCC----CCCCCEEeeCCcCC
Confidence 47999999983 36798889999999 8999999999998754 243 67787544 87778898 66
Q ss_pred CCCeeeeCCCCceeCC-CCcceeeC--CCCCCCCC-CCCCeeeecCCCeeEeCCCCCC
Q psy2856 83 PGGYHCECPPGYHGDA-FTTGCVDA--DECVNRPC-GKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 83 ~~~~~c~c~~g~~~~~-~~~~~~~~--~~c~~~~~-~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
.++|.|.|..||.+.. ....|.++ ++|.. .| ...+.|+++.++|.|.|++||.
T Consensus 113 ~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~-~C~~~~~~C~n~~g~y~C~C~~G~~ 169 (186)
T 1z1y_A 113 IQSAGCSCAIGXVPNPEDEXXCTXTGETACQL-XCNTDNEVCXNVEGVYXCQCMEGFT 169 (186)
T ss_dssp EEEEEEEECTEEEEETTTTTEEEEEECCCCCC-CCCTTTEEEEEETTEEEEEECTTCE
T ss_pred CCCceEECCCCCcccCCCCCcceEcCCCcccc-cccccCcceecCCCCeeeECCCCCc
Confidence 6789999999999843 22347665 78874 78 7789999999999999999983
No 5
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.72 E-value=4.2e-17 Score=92.84 Aligned_cols=106 Identities=38% Similarity=0.893 Sum_probs=85.3
Q ss_pred CCCCCCCeeeeCCCCeEeeCCCCCccCC------CCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCC-
Q psy2856 27 NACGVNALCQNYPGNYTCSCQPGYTGNP------FEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAF- 99 (136)
Q Consensus 27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~------~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~- 99 (136)
++|.+++.|++. |.|.|.+||.+.. ...|.++++|..... .+|.....|++..++|.|.|..||.+...
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~-~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLSK-VSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC-----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCCC-CCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 578888999874 8999999999842 246788899976421 13777789999999999999999998753
Q ss_pred -------CcceeeCCCCCC--CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 100 -------TTGCVDADECVN--RPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 100 -------~~~~~~~~~c~~--~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
...|.+++||.. ..|...+.|+++.++|.|.|++||.
T Consensus 83 ~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~ 128 (143)
T 2bou_A 83 KTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWK 128 (143)
T ss_dssp SCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSC
T ss_pred cccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcc
Confidence 235889999985 5788889999999999999999984
No 6
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.67 E-value=2e-17 Score=96.00 Aligned_cols=115 Identities=35% Similarity=0.784 Sum_probs=76.9
Q ss_pred eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCc--ccCCCCCCCC--CCCCeeeecCC----Ceee
Q psy2856 18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDE--CQYASTHPVC--GPGARCTNFPG----GYHC 88 (136)
Q Consensus 18 ~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~--c~~~~~~~~c--~~~~~c~~~~~----~~~c 88 (136)
.|||+|..+++|. .+.|+++.++|.|.|++||.+... ..|.++++ |..... .+ .....|++..+ .|.|
T Consensus 1 ~dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~--~c~~~~~~~C~~~~~~~~~~~~C 77 (162)
T 1uzk_A 1 TDVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIR--PRGDNGDTACSNEIGVGVSKASC 77 (162)
T ss_dssp CCCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC------------CEEEEEEEECHHHH
T ss_pred CccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCc--ccCCCCCCcccCCcCCcccCcee
Confidence 3789998557886 689999999999999999986532 45666655 643210 01 12345554433 3445
Q ss_pred eCCC---------------------------CceeCCCCcceeeCCCCCCC--CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 89 ECPP---------------------------GYHGDAFTTGCVDADECVNR--PCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 89 ~c~~---------------------------g~~~~~~~~~~~~~~~c~~~--~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
.|.. ||.+......+.+|+||... .|.+ +.|+++.++|.|.|++||.
T Consensus 78 ~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~ 153 (162)
T 1uzk_A 78 CCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYY 153 (162)
T ss_dssp HTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCC
T ss_pred eCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCcc
Confidence 4544 55554433457899999854 4764 6999999999999999984
No 7
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.67 E-value=3.1e-17 Score=90.35 Aligned_cols=106 Identities=32% Similarity=0.767 Sum_probs=79.3
Q ss_pred eeCCCCCCCCCCCCCCeeeeC-CCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCcee
Q psy2856 18 VDINECAHPNACGVNALCQNY-PGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHG 96 (136)
Q Consensus 18 ~~~~~c~~~~~~~~~~~C~~~-~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~ 96 (136)
.|+|+|. .++|. ..|+++ .++|.|.|.+||.+... ++++|...-...+|. ..|.. .+.|.|.|..||.+
T Consensus 2 ~dideC~-~~pC~--~~C~~~~~g~y~C~C~~Gy~g~~~----~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~ 71 (118)
T 1dx5_I 2 EPVDPCF-RANCE--YQCQPLDQTSYLCVCAEGFAPIPH----EPHRCQMFCNQTACP--ADCDP-NTQASCECPEGYIL 71 (118)
T ss_dssp CCCCGGG-GCCCS--SEEEECSSSCEEEECCTTEEEETT----EEEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEE
T ss_pred CccccCC-CCCCC--CCCCCCCCCCEEeECCCCccccCC----CCCccccccCCCCCC--CcccC-CCCeEeECCCCccC
Confidence 4789996 47886 399999 89999999999998742 222332200000143 46766 57899999999997
Q ss_pred CCCCcceeeCCCCCC-CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 97 DAFTTGCVDADECVN-RPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 97 ~~~~~~~~~~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
.. ...|.+++||.. ..| .+.|+++.++|.|.|++||.
T Consensus 72 ~~-g~~C~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~ 109 (118)
T 1dx5_I 72 DD-GFICTDIDECENGGFC--SGVCHNLPGTFECICGPDSA 109 (118)
T ss_dssp ET-TTEEEECCHHHHCSSC--SSEEEECSSSEEEEECSSSS
T ss_pred CC-CCccccccccCCCCCC--cCeEEeCCCCEEEECCCCCc
Confidence 64 456889999987 567 68999999999999999984
No 8
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.63 E-value=1.3e-16 Score=94.54 Aligned_cols=107 Identities=25% Similarity=0.577 Sum_probs=86.0
Q ss_pred CCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecC-----CCeeeeCCCCceeCCCC
Q psy2856 26 PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFP-----GGYHCECPPGYHGDAFT 100 (136)
Q Consensus 26 ~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~-----~~~~c~c~~g~~~~~~~ 100 (136)
+++|.+ +.|+++.++|.|.|.+||.+.....|.++++|.......+|.....|++.. ++|.|.|.+||.+...
T Consensus 10 ~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~- 87 (186)
T 1z1y_A 10 DTICXN-GQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED- 87 (186)
T ss_dssp TCCCBT-EEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT-
T ss_pred CCCCCC-CEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC-
Confidence 468875 499999999999999999986444678888887421011387778999888 8999999999998764
Q ss_pred cceeeCCCCCCCCCCCCCeee----ecCCCeeEeCCCCCC
Q psy2856 101 TGCVDADECVNRPCGKDALCS----NVDGSYTCTCPPGFR 136 (136)
Q Consensus 101 ~~~~~~~~c~~~~~~~~~~c~----~~~g~~~c~C~~g~~ 136 (136)
.|. +++|....|...+.|+ ++.++|.|.|++||.
T Consensus 88 -~C~-~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~ 125 (186)
T 1z1y_A 88 -TCV-LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXV 125 (186)
T ss_dssp -EEE-EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEE
T ss_pred -CCC-CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCc
Confidence 244 7899888888889998 788899999999983
No 9
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.55 E-value=2.4e-16 Score=90.11 Aligned_cols=113 Identities=33% Similarity=0.708 Sum_probs=74.2
Q ss_pred eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCC-----------cccCCCCCCCCCCCCeeeecCC-
Q psy2856 18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDID-----------ECQYASTHPVCGPGARCTNFPG- 84 (136)
Q Consensus 18 ~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~-----------~c~~~~~~~~c~~~~~c~~~~~- 84 (136)
.|+|+|.. ++|.+ +.|+++.++|.|.|++||.+... ..|.+.. .|..... .|.....|....+
T Consensus 2 ~dideC~~-~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~--~c~~~~~C~~~~g~ 77 (147)
T 2w86_A 2 ADIDECES-SPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININ--GATLKSQCCSSLGA 77 (147)
T ss_dssp CCCCGGGG-CCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEE--EEECHHHHHTTTCS
T ss_pred CcCccCcC-CCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCC--ccccCCccccCcCc
Confidence 47899985 78975 69999999999999999998643 3343321 1110000 0000001111111
Q ss_pred ---------CeeeeCCCCceeCCCCcceeeCCCCCCC--CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 85 ---------GYHCECPPGYHGDAFTTGCVDADECVNR--PCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 85 ---------~~~c~c~~g~~~~~~~~~~~~~~~c~~~--~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
.+.|.|.+||.+. ....|.+|+||... .|.+ +.|+++.++|.|.|++||.
T Consensus 78 ~~g~~C~~c~~~C~C~~Gy~~~-~g~~C~dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~ 138 (147)
T 2w86_A 78 AWGSPCTLCQVDPICGKGYSRI-KGTQCEDIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMT 138 (147)
T ss_dssp EETTTTEECCCCTTTCTTEEEE-ETTEEEECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCC
T ss_pred ccCCCcccCCCcccCCCccccC-CCCccCccccccCCCCCCCC-CEEECCCCCEEeeCCCCCc
Confidence 2567899999752 12358899999854 4764 5999999999999999984
No 10
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.52 E-value=2.8e-14 Score=81.11 Aligned_cols=94 Identities=34% Similarity=0.715 Sum_probs=75.1
Q ss_pred eeeeeeCCCCCCC--CCCCCCCeeeeCCCCeEeeCCCCCccCCC---------CCcccCCcccCCCCCCCCCCCCeeeec
Q psy2856 14 FVVFVDINECAHP--NACGVNALCQNYPGNYTCSCQPGYTGNPF---------EGCIDIDECQYASTHPVCGPGARCTNF 82 (136)
Q Consensus 14 ~~~c~~~~~c~~~--~~~~~~~~C~~~~g~~~C~c~~g~~~~~~---------~~c~~~~~c~~~~~~~~c~~~~~c~~~ 82 (136)
...|.++++|... .+|.+.+.|+++.++|.|.|.+||.+... ..|.++++|.... .+|.....|++.
T Consensus 38 ~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~--~~C~~~~~C~n~ 115 (143)
T 2bou_A 38 METCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQ--HQCDSSTVCFNT 115 (143)
T ss_dssp TCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTC--CCCCTTSEEEEC
T ss_pred CCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcC--CCCCCCCEEECC
Confidence 4689999999863 27888899999999999999999998642 2578888887522 148878899999
Q ss_pred CCCeeeeCCCCceeCCCCcceeeCCCC
Q psy2856 83 PGGYHCECPPGYHGDAFTTGCVDADEC 109 (136)
Q Consensus 83 ~~~~~c~c~~g~~~~~~~~~~~~~~~c 109 (136)
.++|.|.|..||.+......|.++++|
T Consensus 116 ~g~y~C~C~~Gy~g~~~~~~C~~~~~C 142 (143)
T 2bou_A 116 VGSYSCRCRPGWKPRHGIPNNQKDTVC 142 (143)
T ss_dssp SSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred CCCEEeeCCCCcccCCCCccCccCCcc
Confidence 999999999999988766656655554
No 11
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.52 E-value=3.6e-14 Score=73.15 Aligned_cols=77 Identities=36% Similarity=0.924 Sum_probs=62.3
Q ss_pred eeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCce
Q psy2856 16 VFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYH 95 (136)
Q Consensus 16 ~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~ 95 (136)
+|.|+|+|..+++|.+ +.|+++.++|.|.|++||.+.. ..|.++++|.... +|.+ ..|++..++|.|.|..||.
T Consensus 1 sC~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g-~~C~dideC~~~~---~C~~-~~C~n~~g~y~C~C~~G~~ 74 (82)
T 1emn_A 1 SAVDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAG-NECVDTDECSVGN---PCGN-GTCKNVIGGFECTCEEGFE 74 (82)
T ss_dssp CCCCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEET-TEEEECCGGGTCC---TTSS-SCEEECSSSEEECCSSSSC
T ss_pred CCCccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCC-CccCCcccccCCC---CCCC-CEeECCCCCEEeECCCCeE
Confidence 4789999986568864 8999999999999999998532 3578889997422 3765 5899999999999999998
Q ss_pred eCC
Q psy2856 96 GDA 98 (136)
Q Consensus 96 ~~~ 98 (136)
+..
T Consensus 75 g~~ 77 (82)
T 1emn_A 75 PGP 77 (82)
T ss_dssp CCS
T ss_pred eCC
Confidence 754
No 12
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.45 E-value=6.3e-13 Score=72.68 Aligned_cols=98 Identities=24% Similarity=0.529 Sum_probs=64.6
Q ss_pred eeeeCCCCCCCCC--------CCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCee
Q psy2856 16 VFVDINECAHPNA--------CGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYH 87 (136)
Q Consensus 16 ~c~~~~~c~~~~~--------~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~ 87 (136)
.+.|+|+|.. ++ |.+++.|+++.++|.|.|.+||.+..+....+.++|..... .|. ..|++..++|.
T Consensus 2 ~~~d~d~C~~-~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~--~C~--~~C~n~~g~y~ 76 (114)
T 1aut_L 2 KHVDGDQCLV-LPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNG--GCT--HYCLEEVGWRR 76 (114)
T ss_dssp ------CCCC-CSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGG--GCS--SEEEECSSSEE
T ss_pred cceecccccC-CCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCC--CCC--CEeECCCCCEE
Confidence 4578899985 66 88899999999999999999999876532122345654221 133 38999999999
Q ss_pred eeCCCCceeCCCCcceeeCCCCCCCCCCCCCeee
Q psy2856 88 CECPPGYHGDAFTTGCVDADECVNRPCGKDALCS 121 (136)
Q Consensus 88 c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~ 121 (136)
|.|..||.+......|.++.+ ..|.....++
T Consensus 77 C~C~~G~~~~~~g~~C~~~~~---~pC~~~~~~i 107 (114)
T 1aut_L 77 CSCAPGYKLGDDLLQCHPAVK---FPCGRPWKRM 107 (114)
T ss_dssp EECCTTEEECTTSSCEEECSS---SCTTCCC---
T ss_pred eECCCCeeECCCCCccCcCcc---cCCCCCCccC
Confidence 999999998776666776543 2455545554
No 13
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.44 E-value=4e-13 Score=76.43 Aligned_cols=88 Identities=27% Similarity=0.593 Sum_probs=63.5
Q ss_pred eeeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCee-eecCCCeeeeCCC
Q psy2856 14 FVVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARC-TNFPGGYHCECPP 92 (136)
Q Consensus 14 ~~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c-~~~~~~~~c~c~~ 92 (136)
+..|.|+|+|.. ++|.+++.|++..++|.|.|.+||.|.. |..+++|...+. .|. ..| .+..++|.|.|..
T Consensus 42 ~~~c~dideC~~-~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~~deC~~~~~--~C~--~~C~~n~~g~y~C~C~~ 113 (146)
T 1x7a_L 42 WKQYVDGDQCEP-NPCLNGGLCKDDINSYECWCQVGFEGKN---CELDATCNIKNG--RCK--QFCKTGADSKVLCSCTT 113 (146)
T ss_dssp --------CCSS-CSSCTTCEEEECSSCEEEECCSSEESTT---TCEECCTTSGGG--SCS--SBCCCCSSSCCCCBCCT
T ss_pred hccCCCcCcCCC-CCCCCCCEeECCCCCEEEecCCCCcCCc---CCCCccccCCCC--CCc--CCCCCCCCCCEEeEcCC
Confidence 457899999984 8999999999999999999999999864 556677865321 254 378 8888999999999
Q ss_pred CceeCCCCcceeeCCCC
Q psy2856 93 GYHGDAFTTGCVDADEC 109 (136)
Q Consensus 93 g~~~~~~~~~~~~~~~c 109 (136)
||.+......|.++++.
T Consensus 114 Gy~l~~dG~~C~~~~~~ 130 (146)
T 1x7a_L 114 GYRLAPDQKSCKPAVPF 130 (146)
T ss_dssp TEEECTTSSSEEECSSS
T ss_pred CcEeCCCCCcCCCCCCC
Confidence 99976666668777643
No 14
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.41 E-value=2.7e-12 Score=72.23 Aligned_cols=87 Identities=34% Similarity=0.842 Sum_probs=67.2
Q ss_pred ee-eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCc
Q psy2856 16 VF-VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGY 94 (136)
Q Consensus 16 ~c-~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~ 94 (136)
.| .++++|.. .+|.+.+.|++..++|.|.|.+||.+..+. .++++|...+ |...+.|+...+.|.|.|.+||
T Consensus 40 ~C~~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~--~~~~~C~~~~----C~~~g~C~~~~g~~~C~C~~G~ 112 (135)
T 2vj3_A 40 RCEIDVNECVS-NPCQNDATCLDQIGEFQCICMPGYEGVHCE--VNTDECASSP----CLHNGRCLDKINEFQCECPTGF 112 (135)
T ss_dssp TSCEECCTTTT-CCCCSSCEEEECSSCEEEECCTTEESSSSC--EECCTTTTCC----STTTCEEEECSSCEEEECCTTE
T ss_pred cccccCccCCC-CCCCCCCEEeCCCCCceeeCCCCCcCCcce--ecCCcccCCC----cCCCCEeECCCCCeEEECCCCC
Confidence 45 48899985 789989999999999999999999987543 3667786544 8888899999999999999999
Q ss_pred eeCCCCcceeeCCCCCCC
Q psy2856 95 HGDAFTTGCVDADECVNR 112 (136)
Q Consensus 95 ~~~~~~~~~~~~~~c~~~ 112 (136)
.+.... .++++|...
T Consensus 113 ~G~~C~---~~i~~C~~~ 127 (135)
T 2vj3_A 113 TGHLCQ---VDLHHILDA 127 (135)
T ss_dssp ESSSSC---EECC-----
T ss_pred cCCccC---ccCccccCC
Confidence 986543 378888654
No 15
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.36 E-value=1.2e-12 Score=67.98 Aligned_cols=78 Identities=44% Similarity=1.048 Sum_probs=60.5
Q ss_pred eCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCC--CCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCce
Q psy2856 19 DINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNP--FEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYH 95 (136)
Q Consensus 19 ~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~--~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~ 95 (136)
|+|+|.. +.+|.+ +.|+++.++|.|.|.+||.+.. ...|.++++|...+. .|. .+.|++..++|.|.|..||.
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~--~C~-~~~C~n~~g~y~C~C~~G~~ 77 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPL--LCR-GGVCHNTEGSYRCECPPGHQ 77 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSS--TTT-TSEEEEETTEEEEESCTTSC
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCC--cCC-CCEeEcCCCCEEEECcCCcc
Confidence 7899985 235864 5999999999999999998642 256888999976441 254 46899999999999999998
Q ss_pred eCCCC
Q psy2856 96 GDAFT 100 (136)
Q Consensus 96 ~~~~~ 100 (136)
+....
T Consensus 78 ~~~~~ 82 (86)
T 1lmj_A 78 LSPNI 82 (86)
T ss_dssp CCSSS
T ss_pred cCCCC
Confidence 76543
No 16
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.34 E-value=5.1e-12 Score=65.03 Aligned_cols=72 Identities=47% Similarity=1.115 Sum_probs=57.1
Q ss_pred cccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCC-CCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 58 CIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV-NRPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 58 c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~-~~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
|.++++|.... +|.+ +.|++..++|.|.|.+||.+.. ..|.++++|. ...|.+ +.|+++.++|.|.|++||.
T Consensus 2 C~dideC~~~~---~C~~-g~C~n~~g~y~C~C~~Gy~~~g--~~C~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~ 74 (82)
T 1emn_A 2 AVDMDECKEPD---VCKH-GQCINTDGSYRCECPFGYILAG--NECVDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFE 74 (82)
T ss_dssp CCCCCSSSSTT---SCSS-SEECCCSSCCCEECCTTEEEET--TEEEECCGGGTCCTTSS-SCEEECSSSEEECCSSSSC
T ss_pred CCccccCCCCC---CcCC-CEEEecCCCEEEECCCCeECCC--CccCCcccccCCCCCCC-CEeECCCCCEEeECCCCeE
Confidence 56777887522 3764 6899999999999999998632 3588999997 456764 6999999999999999984
No 17
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.34 E-value=8.7e-13 Score=68.71 Aligned_cols=72 Identities=42% Similarity=1.031 Sum_probs=56.0
Q ss_pred eCCCCCCCC-CCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeC--CCCc
Q psy2856 19 DINECAHPN-ACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDECQYASTHPVCGPGARCTNFPGGYHCEC--PPGY 94 (136)
Q Consensus 19 ~~~~c~~~~-~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c--~~g~ 94 (136)
|+|+|.... +| +.+.|.++.++|.|.|.+||.+... ..|.++++|...+ |. ..|++..++|.|.| ..||
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~----C~--~~C~n~~g~y~C~C~g~~G~ 74 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENM----CA--QLCVNYPGGYTCYCDGKKGF 74 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSC----CS--SEECCCSSSCCEECCSSSCC
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCC----CC--CEEEccCCCEEEECCCCcCC
Confidence 689998522 37 6789999999999999999986532 4578888997544 75 68999999999999 4666
Q ss_pred eeC
Q psy2856 95 HGD 97 (136)
Q Consensus 95 ~~~ 97 (136)
...
T Consensus 75 ~~~ 77 (87)
T 1z6c_A 75 KLA 77 (87)
T ss_dssp BCC
T ss_pred ccc
Confidence 543
No 18
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.30 E-value=1.5e-12 Score=77.01 Aligned_cols=85 Identities=24% Similarity=0.618 Sum_probs=30.2
Q ss_pred eeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCccc-C-CcccCCCCCCCCCCCCeeeecCCCeeeeCCC
Q psy2856 15 VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCID-I-DECQYASTHPVCGPGARCTNFPGGYHCECPP 92 (136)
Q Consensus 15 ~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~-~-~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~ 92 (136)
..|.++++|.. ++|.+++.|++..++|.|.|.+||.|.. |.. + ++|...+. .|. ..|.+..++|.|.|..
T Consensus 37 ~~c~dideC~~-~pC~ngg~C~n~~g~y~C~C~~Gf~G~~---Ce~~i~deC~~~~~--~C~--~~C~n~~gsy~C~C~~ 108 (195)
T 1nfu_B 37 NKYKDGDQCET-SPCQNQGKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNG--DCD--QFCHEEQNSVVCSCAR 108 (195)
T ss_dssp ------------------------------------------------CCGGGTGGG--GCS--SEEEEETTEEEEECCT
T ss_pred ccCCCCcccCC-CCCCCCCEeECCCCCeeEeCCCCceecc---ccccccccccCCCC--CCC--CEeECCCCCeEEECCC
Confidence 46899999984 8899999999999999999999999865 433 4 66765321 254 3899999999999999
Q ss_pred CceeCCCCcceeeCC
Q psy2856 93 GYHGDAFTTGCVDAD 107 (136)
Q Consensus 93 g~~~~~~~~~~~~~~ 107 (136)
||.+......|.+++
T Consensus 109 Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 109 GYTLADNGKACIPTG 123 (195)
T ss_dssp TEEECTTSSCEEESS
T ss_pred CceeCCCCCccccCC
Confidence 999665555676654
No 19
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.30 E-value=8.1e-12 Score=64.87 Aligned_cols=73 Identities=44% Similarity=1.178 Sum_probs=56.1
Q ss_pred cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCC-CCcceeeCCCCCCCC--CCCCCeeeecCCCeeEeCCCCCC
Q psy2856 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDA-FTTGCVDADECVNRP--CGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~-~~~~~~~~~~c~~~~--~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
++++|...+. .|.+ ..|++..++|.|.|.+||.+.. ....|.+++||.... |. ++.|+++.++|.|.|++||.
T Consensus 2 dideC~~~~~--~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~ 77 (86)
T 1lmj_A 2 DIDECRISPD--LCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQ 77 (86)
T ss_dssp CCCTTTTCSS--TTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSC
T ss_pred ccccccCCCC--CCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCcc
Confidence 3566654331 3654 4899999999999999998653 234688999998765 54 47999999999999999984
No 20
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.29 E-value=2.2e-11 Score=83.34 Aligned_cols=93 Identities=32% Similarity=0.638 Sum_probs=74.1
Q ss_pred eeeeeCCCCCCCCC--CCCCC---eeeeCCCCeEee-CCCCCccCCCC------------CcccCCcccCCCCCCCCCCC
Q psy2856 15 VVFVDINECAHPNA--CGVNA---LCQNYPGNYTCS-CQPGYTGNPFE------------GCIDIDECQYASTHPVCGPG 76 (136)
Q Consensus 15 ~~c~~~~~c~~~~~--~~~~~---~C~~~~g~~~C~-c~~g~~~~~~~------------~c~~~~~c~~~~~~~~c~~~ 76 (136)
..|.++++|.. .+ |.+.+ .|+++.++|.|. |++||.+..+. .|..+++|.... .+|...
T Consensus 39 ~~CeDiDEC~~-~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~--~pC~~~ 115 (634)
T 1yo8_A 39 THCEDLDECAL-VPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKT--HNCHKH 115 (634)
T ss_dssp SSCCBCCTTTT-SCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTC--CCCCTT
T ss_pred CCccccccccC-CCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCC--cccccC
Confidence 67999999985 44 98888 999999999998 99999987532 478889997642 248888
Q ss_pred CeeeecC----CCeeeeCCCCceeCCCCccee---eCCCCCCC
Q psy2856 77 ARCTNFP----GGYHCECPPGYHGDAFTTGCV---DADECVNR 112 (136)
Q Consensus 77 ~~c~~~~----~~~~c~c~~g~~~~~~~~~~~---~~~~c~~~ 112 (136)
..|++.. ++|.|.|..||.+... .|. +++||...
T Consensus 116 ~~Cvnt~~~~~GsY~C~C~~Gy~GdG~--~Ce~d~DiDeC~~~ 156 (634)
T 1yo8_A 116 AECIYLGHFSDPMYKCECQTGYAGDGL--ICGEDSDLDGWPNL 156 (634)
T ss_dssp EEEEECCTTCSSSEEEEECTTEEESSS--SEEECTTSSSSCSS
T ss_pred ccccccccccccceeeeccCCccccCc--ccccccCcccccCC
Confidence 8999988 8999999999998432 364 67888543
No 21
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.29 E-value=6.7e-12 Score=71.16 Aligned_cols=89 Identities=25% Similarity=0.568 Sum_probs=64.8
Q ss_pred eeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCC-CCCCCCCCCeeeecCC-CeeeeCCC
Q psy2856 15 VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYAS-THPVCGPGARCTNFPG-GYHCECPP 92 (136)
Q Consensus 15 ~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~-~~~~c~~~~~c~~~~~-~~~c~c~~ 92 (136)
..|.|+|+|.. ++|.+++.|+++.++|.|.|.+||.|..+. ..++++..-. ....|. ..|++..+ +|.|.|..
T Consensus 42 ~~c~did~C~~-~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~--~~~~~c~~c~~~~~~C~--~~C~~~~g~~y~C~C~~ 116 (142)
T 2c4f_L 42 ISYSDGDQCAS-SPCQNGGSCKDQLQSYICFCLPAFEGRNCE--THKDDQLICVNENGGCE--QYCSDHTGTKRSCRCHE 116 (142)
T ss_dssp HHHTTCCGGGG-CCCCTTCEEEEETTEEEEECCTTEESTTSC--EEGGGCCSTTTGGGGCS--SEEECCTTSCCEEECCT
T ss_pred ccCCccCcCcC-CCcCCCCEEeCCCCCEEeeCCCCccCCccc--cCccccccccCCCCCcc--CEeECCCCCCEEEECCC
Confidence 45788999984 889999999999999999999999987543 1234432111 000122 38988888 99999999
Q ss_pred CceeCCCCcceeeCCC
Q psy2856 93 GYHGDAFTTGCVDADE 108 (136)
Q Consensus 93 g~~~~~~~~~~~~~~~ 108 (136)
||.+......|.++++
T Consensus 117 Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 117 GYSLLADGVSCTPTVE 132 (142)
T ss_dssp TEEECTTSSCEEESSS
T ss_pred CceECCCCCCCCCCCc
Confidence 9997665566777765
No 22
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.27 E-value=2.9e-12 Score=71.92 Aligned_cols=85 Identities=24% Similarity=0.618 Sum_probs=29.8
Q ss_pred eeeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCccc-C-CcccCCCCCCCCCCCCeeeecCCCeeeeCCC
Q psy2856 15 VVFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCID-I-DECQYASTHPVCGPGARCTNFPGGYHCECPP 92 (136)
Q Consensus 15 ~~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~-~-~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~ 92 (136)
..|.++|+|.. ++|.+++.|++..++|.|.|.+||.|.. |.. + ++|...+. .|. ..|++..++|.|.|.+
T Consensus 37 ~~c~d~d~C~~-~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~~i~d~C~~~~~--~C~--~~C~~~~g~y~C~C~~ 108 (134)
T 2vh0_B 37 NKYKDGDQCET-SPCQNQGKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNG--DCD--QFCHEEQNSVVCSCAR 108 (134)
T ss_dssp ------------------------------------------------CCGGGTGGG--GCS--SEEEEETTEEEEECCT
T ss_pred ccCCCcCcCCC-CCCCCcCCcccCCCCEEeeCCCCccCCc---cccCCCCccccCCC--CCC--CEeECCCCCEEEECCC
Confidence 46889999984 7899999999999999999999999864 333 4 66764321 254 3899999999999999
Q ss_pred CceeCCCCcceeeCC
Q psy2856 93 GYHGDAFTTGCVDAD 107 (136)
Q Consensus 93 g~~~~~~~~~~~~~~ 107 (136)
||.+......|.+++
T Consensus 109 Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 109 GYTLADNGKACIPTG 123 (134)
T ss_dssp TEEECTTSSCEEESS
T ss_pred CcEECCCCCccCcCC
Confidence 999766555576654
No 23
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.26 E-value=2.6e-11 Score=77.30 Aligned_cols=87 Identities=31% Similarity=0.674 Sum_probs=68.1
Q ss_pred eeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeC
Q psy2856 18 VDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97 (136)
Q Consensus 18 ~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~ 97 (136)
.|+|+|.. ++|.+++.|.+..++|.|.|.+||.+..++ .++++|.... ..+|.+ .|.+..++|.|.|..||.+.
T Consensus 3 ~d~~~C~~-~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~--~~~~eC~~~~-~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 3 KGGSPCIS-QPCLHNGSCQDSIWGYTCTCSPGYEGSNCE--LAKNECHPER-TDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp ---CCTTS-CCCTTTCCCCCCSSSCCCCCSSSCCSSSSC--CCSSSCCTTC-TTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred ccCCcCCC-CCCCCCCEeECCCCCeEEECCCCCcCCccc--cCcccCCCCC-CCCCcC--ccccCCCeeEEecccccccc
Confidence 57899985 889999999999999999999999987543 3788887521 013764 89999999999999999987
Q ss_pred CCCcceeeCCCCC
Q psy2856 98 AFTTGCVDADECV 110 (136)
Q Consensus 98 ~~~~~~~~~~~c~ 110 (136)
.....|.++++|.
T Consensus 77 ~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 77 EDHKQCVPHDQCA 89 (317)
T ss_dssp TTSSCCEECSSCC
T ss_pred ccccccccccccc
Confidence 7666788887764
No 24
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.20 E-value=6.5e-11 Score=67.19 Aligned_cols=77 Identities=29% Similarity=0.744 Sum_probs=62.1
Q ss_pred eeeCCCCCCCCCCCCCCeee-------eCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeee
Q psy2856 17 FVDINECAHPNACGVNALCQ-------NYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCE 89 (136)
Q Consensus 17 c~~~~~c~~~~~~~~~~~C~-------~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~ 89 (136)
|.++++|.. ++|.+.+.|. ++.++|.|.|.+||.+..+. .++++|...+ |.....|++..+.|.|.
T Consensus 49 c~~~~~C~~-~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~--~~i~~C~~~~----C~~~~~C~~~~g~~~C~ 121 (143)
T 4d90_A 49 PTSAGPCTP-NPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ--HNINECEVEP----CKNGGICTDLVANYSCE 121 (143)
T ss_dssp CCCCCTTSS-CCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSC--EECCTTTTCC----SCTTCEEEEETTEEEEE
T ss_pred cccCCcCCC-CCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcc--cCCCcCCCCC----CCCCCEeECCCCCeEeE
Confidence 345677764 7899999999 66689999999999887543 3788887544 88889999999999999
Q ss_pred CCCCceeCCCC
Q psy2856 90 CPPGYHGDAFT 100 (136)
Q Consensus 90 c~~g~~~~~~~ 100 (136)
|..||.+....
T Consensus 122 C~~G~~G~~c~ 132 (143)
T 4d90_A 122 CPGEFMGRNCQ 132 (143)
T ss_dssp CCTTCBSTTSC
T ss_pred CCCCCccCCce
Confidence 99999987653
No 25
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.19 E-value=3e-11 Score=63.31 Aligned_cols=76 Identities=20% Similarity=0.470 Sum_probs=58.7
Q ss_pred CeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCccee--eCCCCCCCCCCCCC
Q psy2856 41 NYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCV--DADECVNRPCGKDA 118 (136)
Q Consensus 41 ~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~--~~~~c~~~~~~~~~ 118 (136)
+|.|.|.+||.+... ++++|...+ | ++..+.|.|.|.+||. .|. ++++|...+|.+++
T Consensus 1 sy~C~C~~g~~g~~c----~~~~c~~~p----C------~n~~~~y~C~C~~G~~------~C~~~~~~~C~~~pC~ngg 60 (91)
T 1tpg_A 1 SYQVICRDEKTQMIY----QQHQSWLRP----V------LRSNRVEYCWCNSGRA------QCHSVPVKSCSEPRCFNGG 60 (91)
T ss_dssp CCCCCCBCSSSCCBC----CSSCEEEEE----C------SSSSCEEEEECSSSCC------BCCEECEEECSSCCSCTTC
T ss_pred CeeeECCCCCcCCeE----CCCcccCCc----c------ccCCCCcEeECCCCCc------ccccCcCCcccCCCCCCCC
Confidence 578999999988632 355555432 3 3345678999999996 253 68899988999999
Q ss_pred eeeecC--CCeeEeCCCCCC
Q psy2856 119 LCSNVD--GSYTCTCPPGFR 136 (136)
Q Consensus 119 ~c~~~~--g~~~c~C~~g~~ 136 (136)
.|++.. ++|.|.|++||.
T Consensus 61 ~C~~~~~~~~~~C~C~~G~~ 80 (91)
T 1tpg_A 61 TCQQALYFSDFVCQCPEGFA 80 (91)
T ss_dssp EEEEESSSSCEEEECCTTCB
T ss_pred EeecCCCCCCeEeECCCCCc
Confidence 999987 899999999983
No 26
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.17 E-value=4.6e-12 Score=68.33 Aligned_cols=78 Identities=33% Similarity=0.803 Sum_probs=32.7
Q ss_pred eeeeeeCCCCCCC-CCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCC
Q psy2856 14 FVVFVDINECAHP-NACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPP 92 (136)
Q Consensus 14 ~~~c~~~~~c~~~-~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~ 92 (136)
...| ++|+|... ..| .+.|.++.++|.|.|++||.+.....|.++++|.... +|. ..|++..++|.|.|..
T Consensus 24 ~~~C-d~neC~~~~~~C--~~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~---~C~--~~C~n~~gsy~C~C~~ 95 (107)
T 2w2n_E 24 QGAM-GTNECLDNNGGC--SYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD---TCS--QLCVNLEGGYKCQCEE 95 (107)
T ss_dssp SCCB-SCCGGGTGGGGC--SSEEECCSBSCEEECCTTCEEETTTEEEC--------------------------------
T ss_pred CCCC-cCccCcCCCCCC--CCEeEeCCCCeEEECCCCccccCCCccccccccCCCC---CcC--CeeecCCCCEEEECCC
Confidence 3444 78888742 244 3689999999999999999985435688889997422 364 6899999999999999
Q ss_pred CceeCCC
Q psy2856 93 GYHGDAF 99 (136)
Q Consensus 93 g~~~~~~ 99 (136)
||.+...
T Consensus 96 Gy~~~~d 102 (107)
T 2w2n_E 96 GFQLDPH 102 (107)
T ss_dssp -------
T ss_pred CceECCC
Confidence 9987543
No 27
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.16 E-value=4e-11 Score=68.17 Aligned_cols=72 Identities=26% Similarity=0.685 Sum_probs=53.9
Q ss_pred CcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCee-eecCCCeeEeCCCCC
Q psy2856 57 GCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALC-SNVDGSYTCTCPPGF 135 (136)
Q Consensus 57 ~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c-~~~~g~~~c~C~~g~ 135 (136)
.|.++++|...+ |.+++.|++..++|.|.|..||.+.. |.++++|........+.| +++.++|.|.|++||
T Consensus 44 ~c~dideC~~~p----C~n~g~C~~~~~~y~C~C~~G~~G~~----C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy 115 (146)
T 1x7a_L 44 QYVDGDQCEPNP----CLNGGLCKDDINSYECWCQVGFEGKN----CELDATCNIKNGRCKQFCKTGADSKVLCSCTTGY 115 (146)
T ss_dssp ------CCSSCS----SCTTCEEEECSSCEEEECCSSEESTT----TCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTE
T ss_pred cCCCcCcCCCCC----CCCCCEeECCCCCEEEecCCCCcCCc----CCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCc
Confidence 467888887644 88888999999999999999998754 566788986533344589 999999999999998
Q ss_pred C
Q psy2856 136 R 136 (136)
Q Consensus 136 ~ 136 (136)
.
T Consensus 116 ~ 116 (146)
T 1x7a_L 116 R 116 (146)
T ss_dssp E
T ss_pred E
Confidence 3
No 28
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.15 E-value=2.8e-11 Score=62.97 Aligned_cols=71 Identities=45% Similarity=1.089 Sum_probs=55.2
Q ss_pred cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCC--CCC
Q psy2856 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCP--PGF 135 (136)
Q Consensus 60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~--~g~ 135 (136)
++++|...+. .| ..+.|++..++|.|.|.+||.+......|.+++||....|. +.|+++.++|.|.|+ .||
T Consensus 2 dideC~~~~~--~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~g~~G~ 74 (87)
T 1z6c_A 2 DVDECSLKPS--IC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTCYCDGKKGF 74 (87)
T ss_dssp CSCSSSSSSS--SB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCEECCSSSCC
T ss_pred ccccccCCCC--CC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEEECCCCcCC
Confidence 3456654331 25 45788888899999999999976655678899999877775 799999999999994 665
No 29
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.05 E-value=1.3e-10 Score=62.65 Aligned_cols=70 Identities=37% Similarity=0.935 Sum_probs=29.2
Q ss_pred cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC-CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN-RPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
++++|..... .|. ..|++..++|.|.|..||.+.. ...|.+++||.. ..|. +.|+++.++|.|.|++||.
T Consensus 28 d~neC~~~~~--~C~--~~C~n~~g~y~C~C~~Gy~g~~-g~~C~dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~ 98 (107)
T 2w2n_E 28 GTNECLDNNG--GCS--YVCNDLKIGYECLCPDGFQLVA-QRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQ 98 (107)
T ss_dssp SCCGGGTGGG--GCS--SEEECCSBSCEEECCTTCEEET-TTEEEC--------------------------------
T ss_pred cCccCcCCCC--CCC--CEeEeCCCCeEEECCCCccccC-CCccccccccCCCCCcC--CeeecCCCCEEEECCCCce
Confidence 5677764321 243 5898888999999999999843 245889999974 4564 7999999999999999984
No 30
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.05 E-value=4e-10 Score=73.98 Aligned_cols=80 Identities=36% Similarity=0.847 Sum_probs=61.6
Q ss_pred CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCC
Q psy2856 21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFT 100 (136)
Q Consensus 21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~ 100 (136)
|||.. .++...+.|.+++++|.|.|++||.+.....|.++++|.... .|. ..|.+..++|.|.|..||.+....
T Consensus 1 ~eC~~-~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~---~C~--~~C~n~~g~~~C~C~~g~~~~~~~ 74 (400)
T 3p5b_L 1 NECLD-NNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD---TCS--QLCVNLEGGYKCQCEEGFQLDPHT 74 (400)
T ss_dssp CCTTT-TGGGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTS---SCS--SCCBCCSSSCBCCCCTTCCCCTTT
T ss_pred CcccC-CCCCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccC---CCC--CccCCCccceeeeccccccccccc
Confidence 57764 455567899999999999999999864335688999997432 365 489999999999999999877655
Q ss_pred cceeeC
Q psy2856 101 TGCVDA 106 (136)
Q Consensus 101 ~~~~~~ 106 (136)
..|.++
T Consensus 75 ~~C~~~ 80 (400)
T 3p5b_L 75 KACKAV 80 (400)
T ss_dssp SSCCCS
T ss_pred cceeec
Confidence 445443
No 31
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.01 E-value=6.7e-11 Score=70.04 Aligned_cols=72 Identities=26% Similarity=0.677 Sum_probs=23.5
Q ss_pred CcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceee-C-CCCCCCCCCCCCeeeecCCCeeEeCCCC
Q psy2856 57 GCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD-A-DECVNRPCGKDALCSNVDGSYTCTCPPG 134 (136)
Q Consensus 57 ~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~-~-~~c~~~~~~~~~~c~~~~g~~~c~C~~g 134 (136)
.|.++++|...+ |.+++.|+...++|.|.|..||.+.. |.+ + ++|......+.+.|+++.++|.|.|++|
T Consensus 38 ~c~dideC~~~p----C~ngg~C~n~~g~y~C~C~~Gf~G~~----Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~G 109 (195)
T 1nfu_B 38 KYKDGDQCETSP----CQNQGKCKDGLGEYTCTCLEGFEGKN----CELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARG 109 (195)
T ss_dssp ---------------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTT
T ss_pred cCCCCcccCCCC----CCCCCEeECCCCCeeEeCCCCceecc----ccccccccccCCCCCCCCEeECCCCCeEEECCCC
Confidence 467788887654 88888999988999999999998765 444 5 7887653333459999999999999999
Q ss_pred CC
Q psy2856 135 FR 136 (136)
Q Consensus 135 ~~ 136 (136)
|.
T Consensus 110 y~ 111 (195)
T 1nfu_B 110 YT 111 (195)
T ss_dssp EE
T ss_pred ce
Confidence 83
No 32
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.98 E-value=9.8e-10 Score=59.94 Aligned_cols=63 Identities=25% Similarity=0.634 Sum_probs=47.7
Q ss_pred CCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 73 CGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 73 c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
|.+++.|++..++|.|.|..||.+..+.. ..++++|........+.|+++.++|.|.|++||.
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~-~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQR-EVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTEESTTSCE-ECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEE
T ss_pred CCCcCCCCCCCCCcEeeCCCCCcCCCcCc-CCcCCcCcCCCCCCCCEeECCCCCEEeECCCCee
Confidence 66677898888999999999999876432 1123468754333445999999999999999983
No 33
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.97 E-value=1.5e-09 Score=71.31 Aligned_cols=61 Identities=38% Similarity=0.953 Sum_probs=49.9
Q ss_pred CCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC-CCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 73 CGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN-RPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 73 c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
+.....|.+..++|.|.|.+||.+. ....|.+++||.. ..| .+.|+++.|+|.|.|.+||.
T Consensus 8 ~~c~~~C~~~~~~y~C~C~~G~~~~-~~~~C~dideC~~~~~C--~~~C~n~~g~~~C~C~~g~~ 69 (400)
T 3p5b_L 8 GGCSHVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQ 69 (400)
T ss_dssp GGCSSEEEECSSSEEEECCTTEEEC-SSSCEEECCCCSTTSSC--SSCCBCCSSSCBCCCCTTCC
T ss_pred CCCCCEeECCCCCeEEECCCCCCcC-CCCcccCchhhhccCCC--CCccCCCccceeeecccccc
Confidence 3445789999999999999999973 3456899999984 345 45999999999999999984
No 34
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.94 E-value=3.7e-10 Score=73.79 Aligned_cols=83 Identities=29% Similarity=0.653 Sum_probs=21.4
Q ss_pred eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeC
Q psy2856 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97 (136)
Q Consensus 19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~ 97 (136)
|+|+|.. +++...+.|.+..|+|.|.|.+||..... ..|.++++|.... .|. ..|.+..++|.|.|.+||.+.
T Consensus 2 ~~~~C~~-~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~---~C~--~~C~~~~g~~~C~C~~g~~l~ 75 (386)
T 3v65_B 2 GEENCNV-NNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEG---YCS--QGCTNSEGAFQCWCEAGYELR 75 (386)
T ss_dssp ------------------------------------------------------CCT--TEEC-----CCEECCTTEEEC
T ss_pred CcCcccC-CCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcC---ccc--CcCCCCCCCCeEEECCCceEc
Confidence 6789975 44444568988889999999999985432 5688899996322 365 359999999999999999976
Q ss_pred CCCcceeeCC
Q psy2856 98 AFTTGCVDAD 107 (136)
Q Consensus 98 ~~~~~~~~~~ 107 (136)
.....|..++
T Consensus 76 ~d~~~C~~~~ 85 (386)
T 3v65_B 76 PDRRSCKALG 85 (386)
T ss_dssp TTSSCEEECS
T ss_pred CCCCeECCcc
Confidence 6555566544
No 35
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.93 E-value=3.4e-09 Score=74.88 Aligned_cols=57 Identities=39% Similarity=0.955 Sum_probs=47.7
Q ss_pred CeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856 77 ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 77 ~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~ 135 (136)
..|.+..++|.|.|..||.+ .....|.+++||.. ...+.+.|+++.|+|.|.|++||
T Consensus 324 ~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy 380 (791)
T 3m0c_C 324 HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGF 380 (791)
T ss_dssp SEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSS-SSSCTTTCCBCSSCBCCCCCSSE
T ss_pred ccccCCCCCcccCCCCCCcc-CCCCccccCcccCC-CCCCCCeeecCCCCceeecCCCC
Confidence 58999999999999999987 33456899999983 33445799999999999999998
No 36
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.93 E-value=2.2e-10 Score=64.26 Aligned_cols=72 Identities=26% Similarity=0.677 Sum_probs=23.0
Q ss_pred CcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceee-C-CCCCCCCCCCCCeeeecCCCeeEeCCCC
Q psy2856 57 GCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD-A-DECVNRPCGKDALCSNVDGSYTCTCPPG 134 (136)
Q Consensus 57 ~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~-~-~~c~~~~~~~~~~c~~~~g~~~c~C~~g 134 (136)
.|.++++|...+ |.+++.|+...++|.|.|..||.+.. |.+ + ++|........+.|+++.++|.|.|++|
T Consensus 38 ~c~d~d~C~~~p----C~n~g~C~~~~~~y~C~C~~G~~G~~----C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~G 109 (134)
T 2vh0_B 38 KYKDGDQCETSP----CQNQGKCKDGLGEYTCTCLEGFEGKN----CELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARG 109 (134)
T ss_dssp ---------------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTT
T ss_pred cCCCcCcCCCCC----CCCcCCcccCCCCEEeeCCCCccCCc----cccCCCCccccCCCCCCCEeECCCCCEEEECCCC
Confidence 356778887544 88888999888899999999998754 444 5 7787643333359999999999999999
Q ss_pred CC
Q psy2856 135 FR 136 (136)
Q Consensus 135 ~~ 136 (136)
|.
T Consensus 110 y~ 111 (134)
T 2vh0_B 110 YT 111 (134)
T ss_dssp EE
T ss_pred cE
Confidence 83
No 37
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.91 E-value=2.3e-09 Score=60.72 Aligned_cols=72 Identities=28% Similarity=0.654 Sum_probs=52.9
Q ss_pred cccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCC---CCCCeeeecCC-CeeEeCCC
Q psy2856 58 CIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPC---GKDALCSNVDG-SYTCTCPP 133 (136)
Q Consensus 58 c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~---~~~~~c~~~~g-~~~c~C~~ 133 (136)
+.++++|...+ |.+++.|++..++|.|.|..||.+..+.. +++++..-.+ ...+.|+++.+ +|.|.|++
T Consensus 44 c~did~C~~~p----C~n~g~C~~~~g~y~C~C~~G~~G~~C~~---~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~ 116 (142)
T 2c4f_L 44 YSDGDQCASSP----CQNGGSCKDQLQSYICFCLPAFEGRNCET---HKDDQLICVNENGGCEQYCSDHTGTKRSCRCHE 116 (142)
T ss_dssp HTTCCGGGGCC----CCTTCEEEEETTEEEEECCTTEESTTSCE---EGGGCCSTTTGGGGCSSEEECCTTSCCEEECCT
T ss_pred CCccCcCcCCC----cCCCCEEeCCCCCEEeeCCCCccCCcccc---CccccccccCCCCCccCEeECCCCCCEEEECCC
Confidence 45677887544 88888999999999999999998765432 2455422222 22348999999 99999999
Q ss_pred CCC
Q psy2856 134 GFR 136 (136)
Q Consensus 134 g~~ 136 (136)
||.
T Consensus 117 Gy~ 119 (142)
T 2c4f_L 117 GYS 119 (142)
T ss_dssp TEE
T ss_pred Cce
Confidence 983
No 38
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.83 E-value=7.5e-10 Score=72.37 Aligned_cols=69 Identities=28% Similarity=0.763 Sum_probs=13.3
Q ss_pred CCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC-CCCCCCCeeeecCCCeeEeCCCCC
Q psy2856 61 IDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN-RPCGKDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 61 ~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~-~~~~~~~~c~~~~g~~~c~C~~g~ 135 (136)
+++|...+ +.....|.+..++|.|.|.+||.+......|.+++||.. ..|. +.|+++.|+|.|.|++||
T Consensus 3 ~~~C~~~~----~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~--~~C~~~~g~~~C~C~~g~ 72 (386)
T 3v65_B 3 EENCNVNN----GGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCS--QGCTNSEGAFQCWCEAGY 72 (386)
T ss_dssp -----------------------------------------------------CCT--TEEC-----CCEECCTTE
T ss_pred cCcccCCC----CCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCccc--CcCCCCCCCCeEEECCCc
Confidence 45665443 333457877788899999999987655567899999973 3554 569999999999999997
No 39
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.81 E-value=7.6e-09 Score=65.97 Aligned_cols=66 Identities=33% Similarity=0.857 Sum_probs=52.6
Q ss_pred cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCccee-eCCCCCC---CCCCCCCeeeecCCCeeEeCCCCC
Q psy2856 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCV-DADECVN---RPCGKDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~-~~~~c~~---~~~~~~~~c~~~~g~~~c~C~~g~ 135 (136)
+.++|...+ |.++..|....+.|.|.|.+||.+.. |. +++||.. ..|.. .|+++.++|.|.|++||
T Consensus 4 d~~~C~~~p----C~~~g~C~~~~~~~~C~C~~g~~g~~----C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 4 GGSPCISQP----CLHNGSCQDSIWGYTCTCSPGYEGSN----CELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGY 73 (317)
T ss_dssp --CCTTSCC----CTTTCCCCCCSSSCCCCCSSSCCSSS----SCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTE
T ss_pred cCCcCCCCC----CCCCCEeECCCCCeEEECCCCCcCCc----cccCcccCCCCCCCCCcC--ccccCCCeeEEeccccc
Confidence 455676544 88888898888899999999998764 44 8999986 45653 99999999999999987
No 40
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.75 E-value=7.5e-09 Score=60.26 Aligned_cols=86 Identities=29% Similarity=0.739 Sum_probs=60.5
Q ss_pred CCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC
Q psy2856 32 NALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN 111 (136)
Q Consensus 32 ~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~ 111 (136)
++.|.+ .+.|.|.+||.+..+.. |...+ .|.++ .|+ +.+.|.|.+||.+.... .++++|..
T Consensus 76 ~g~C~~---~~~C~C~~G~~G~~C~~------C~~~~---~C~~g-~C~---~~~~C~C~~G~~G~~C~---~~~~~C~~ 136 (169)
T 2vj2_A 76 HGSCKL---PGDCRCQYGWQGLYCDK------CIPHP---GCVHG-ICN---EPWQCLCETNWGGQLCD---KDLNYCGT 136 (169)
T ss_dssp TEECSS---TTCCEECTTEESSSSCE------ECCCT---TCSSE-ECS---STTCCEECTTEETTTTC---EESCHHHH
T ss_pred CcccCC---CCeeECCCCCCCCCccc------CCCCC---CCCCC-CcC---CCCEEeCCCCCCCCccc---CCCCCCCC
Confidence 445643 46888888888765432 22211 24433 564 46789999999976543 27788875
Q ss_pred -CCCCCCCeeeec-CCCeeEeCCCCCC
Q psy2856 112 -RPCGKDALCSNV-DGSYTCTCPPGFR 136 (136)
Q Consensus 112 -~~~~~~~~c~~~-~g~~~c~C~~g~~ 136 (136)
..|..++.|+++ .++|.|.|++||.
T Consensus 137 ~~~C~~~g~C~~~~~~~~~C~C~~G~~ 163 (169)
T 2vj2_A 137 HQPCLNGGTCSNTGPDKYQCSCPEGYS 163 (169)
T ss_dssp TCCCCTTCEEEECSTTCEEEECCTTCC
T ss_pred CCCCCCCCEEcCCCCCCcEeECCCCCc
Confidence 578888999996 7899999999984
No 41
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.74 E-value=3.5e-08 Score=69.08 Aligned_cols=57 Identities=39% Similarity=1.023 Sum_probs=47.2
Q ss_pred CeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCC-CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 77 ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNR-PCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 77 ~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~-~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
..|.+..++|.|.|..||.+ .....|.+++||... .| .+.|+++.|+|.|.|++||.
T Consensus 306 ~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~ 363 (699)
T 1n7d_A 306 HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQ 363 (699)
T ss_dssp TTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSSSSC--TTTCCBCSSCBCCCCCSSCB
T ss_pred CCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCCCcc--ccccccCCCCeeeeeecccc
Confidence 57888889999999999987 334468899999743 45 47999999999999999984
No 42
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.67 E-value=4.1e-08 Score=42.95 Aligned_cols=35 Identities=29% Similarity=0.722 Sum_probs=31.4
Q ss_pred eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54 (136)
Q Consensus 19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~ 54 (136)
|+++|.. ++|.+++.|++..++|.|.|++||.|..
T Consensus 2 d~d~C~~-~pC~ngg~C~~~~~~~~C~C~~G~~G~~ 36 (39)
T 1edm_B 2 DGDQCES-NPCLNGGSCKDDINSYECWCPFGFEGKN 36 (39)
T ss_dssp CCCTTTT-CCCCTTCEEEEETTEEEEECCTTCCSTT
T ss_pred ccccCCC-CCCCCCCEeEcCCCceEeECCCCCcCCc
Confidence 6889984 8999999999999999999999998864
No 43
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.67 E-value=7.3e-08 Score=50.33 Aligned_cols=56 Identities=23% Similarity=0.645 Sum_probs=45.0
Q ss_pred eeeCCCCeEeeCCCCCccCCCCCcc--cCCcccCCCCCCCCCCCCeeeecC--CCeeeeCCCCceeCCC
Q psy2856 35 CQNYPGNYTCSCQPGYTGNPFEGCI--DIDECQYASTHPVCGPGARCTNFP--GGYHCECPPGYHGDAF 99 (136)
Q Consensus 35 C~~~~g~~~C~c~~g~~~~~~~~c~--~~~~c~~~~~~~~c~~~~~c~~~~--~~~~c~c~~g~~~~~~ 99 (136)
|++..++|.|.|.+||. .|. ++++|...+ |.+++.|+... +.|.|.|..||.+..+
T Consensus 25 C~n~~~~y~C~C~~G~~-----~C~~~~~~~C~~~p----C~ngg~C~~~~~~~~~~C~C~~G~~G~~C 84 (91)
T 1tpg_A 25 VLRSNRVEYCWCNSGRA-----QCHSVPVKSCSEPR----CFNGGTCQQALYFSDFVCQCPEGFAGKSC 84 (91)
T ss_dssp CSSSSCEEEEECSSSCC-----BCCEECEEECSSCC----SCTTCEEEEESSSSCEEEECCTTCBSSSC
T ss_pred cccCCCCcEeECCCCCc-----ccccCcCCcccCCC----CCCCCEeecCCCCCCeEeECCCCCcCCcC
Confidence 55667899999999996 343 567787644 88889999877 8999999999987654
No 44
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.65 E-value=4.1e-08 Score=69.51 Aligned_cols=72 Identities=33% Similarity=0.812 Sum_probs=57.0
Q ss_pred CeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCC
Q psy2856 33 ALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADEC 109 (136)
Q Consensus 33 ~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c 109 (136)
+.|.++.++|.|.|.+||.+.....|.++++|.... .|. ..|.+..++|.|.|.+||.+......|.+++++
T Consensus 324 ~~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~---~C~--~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 324 HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD---TCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI 395 (791)
T ss_dssp SEEEECSBSEEEECCTTCEEETTTEEECCCCCSSSS---SCT--TTCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred ccccCCCCCcccCCCCCCccCCCCccccCcccCCCC---CCC--CeeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence 489999999999999999863335688999997422 353 589999999999999999987666667766644
No 45
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.58 E-value=6.6e-11 Score=72.83 Aligned_cols=105 Identities=14% Similarity=0.106 Sum_probs=72.9
Q ss_pred CCCCCCeeeeCCCCeEeeCCCCCccCCCCC---------------------------cccCCcccCCCCCCCCCCCCeee
Q psy2856 28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEG---------------------------CIDIDECQYASTHPVCGPGARCT 80 (136)
Q Consensus 28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~---------------------------c~~~~~c~~~~~~~~c~~~~~c~ 80 (136)
.+.+++.|++..++|.|.|+.||.+..++. |....+|...+ |.+...|+
T Consensus 39 ~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~p----C~ngG~C~ 114 (267)
T 4fbr_A 39 KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIK----SNDGGKTL 114 (267)
T ss_dssp ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEE----CSSTTSEE
T ss_pred CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCC----CCCCCEEe
Confidence 578899999999999999999998754421 11112233323 77788888
Q ss_pred ecCCCeeeeCCCCceeCCCCcc--------------------eeeCC------CCCCCCCCCCCeeeecCCCeeEeCCCC
Q psy2856 81 NFPGGYHCECPPGYHGDAFTTG--------------------CVDAD------ECVNRPCGKDALCSNVDGSYTCTCPPG 134 (136)
Q Consensus 81 ~~~~~~~c~c~~g~~~~~~~~~--------------------~~~~~------~c~~~~~~~~~~c~~~~g~~~c~C~~g 134 (136)
....+|.|.|+.||.+..+... +.+-. .+.+.++...+.|++...+|.|.|++|
T Consensus 115 ~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~G 194 (267)
T 4fbr_A 115 TGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIG 194 (267)
T ss_dssp EEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEE
T ss_pred cCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCC
Confidence 8888999999999988654320 01011 122224667788888888999999998
Q ss_pred CC
Q psy2856 135 FR 136 (136)
Q Consensus 135 ~~ 136 (136)
|+
T Consensus 195 f~ 196 (267)
T 4fbr_A 195 FR 196 (267)
T ss_dssp EE
T ss_pred cc
Confidence 84
No 46
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.53 E-value=2.2e-07 Score=65.13 Aligned_cols=81 Identities=36% Similarity=0.863 Sum_probs=59.6
Q ss_pred eCCCCCCCC-CCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeC
Q psy2856 19 DINECAHPN-ACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97 (136)
Q Consensus 19 ~~~~c~~~~-~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~ 97 (136)
++++|...+ .| .+.|.++.++|.|.|.+||.+.....|.++++|.... .|. ..|.+..++|.|.|..||.+.
T Consensus 293 ~~~eC~~~~~~C--~~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~---~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 293 GTNECLDNNGGC--SHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD---TCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCCTTSSTTTS--CTTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSS---SCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred ccccccccccCc--CCCcccCCCCcEEeCCCCeEcCCCCcccCccccCCCC---ccc--cccccCCCCeeeeeecccccC
Confidence 456665321 23 4689999999999999999974345688999997432 364 589999999999999999976
Q ss_pred CCCcceeeC
Q psy2856 98 AFTTGCVDA 106 (136)
Q Consensus 98 ~~~~~~~~~ 106 (136)
.....|.++
T Consensus 366 ~~~~~C~~~ 374 (699)
T 1n7d_A 366 PHTKACKAV 374 (699)
T ss_dssp SSCCCCBCC
T ss_pred CCCCccccc
Confidence 554445543
No 47
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.51 E-value=3.7e-08 Score=56.97 Aligned_cols=72 Identities=36% Similarity=0.834 Sum_probs=50.2
Q ss_pred cCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCC--CCCCC--C--CCCCeeeecCC----CeeE
Q psy2856 60 DIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADE--CVNRP--C--GKDALCSNVDG----SYTC 129 (136)
Q Consensus 60 ~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~--c~~~~--~--~~~~~c~~~~g----~~~c 129 (136)
++++|.... +|. .+.|++..++|.|.|.+||.+......|.++++ |.... + ...+.|++..+ +|.|
T Consensus 2 dideC~~~~---~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C 77 (162)
T 1uzk_A 2 DVNECLDPT---TCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC 77 (162)
T ss_dssp CCCGGGSTT---SSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHH
T ss_pred ccccCCCCC---CCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCcee
Confidence 456776422 375 579999999999999999998765667888876 76432 2 23578888776 7888
Q ss_pred eCCCCC
Q psy2856 130 TCPPGF 135 (136)
Q Consensus 130 ~C~~g~ 135 (136)
.|++||
T Consensus 78 ~C~~G~ 83 (162)
T 1uzk_A 78 CCSLGK 83 (162)
T ss_dssp HTTTCC
T ss_pred eCCCCC
Confidence 888887
No 48
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.49 E-value=6.4e-08 Score=53.03 Aligned_cols=59 Identities=34% Similarity=0.754 Sum_probs=47.1
Q ss_pred CeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeC
Q psy2856 33 ALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGD 97 (136)
Q Consensus 33 ~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~ 97 (136)
+.|.+ .++|.|.|++||.+.....|.++++|.... +| ...|++..++|.|.|..||.+.
T Consensus 53 ~~C~~-~~~y~C~C~~Gy~~~~g~~C~dideC~~~~---~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 53 ADCDP-NTQASCECPEGYILDDGFICTDIDECENGG---FC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp CEECT-TSTTCEECCTTEEEETTTEEEECCHHHHCS---SC--SSEEEECSSSEEEEECSSSSCE
T ss_pred CcccC-CCCeEeECCCCccCCCCCccccccccCCCC---CC--cCeEEeCCCCEEEECCCCCccC
Confidence 67887 589999999999854334578889997622 37 5789999999999999999764
No 49
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.45 E-value=3.6e-07 Score=39.86 Aligned_cols=32 Identities=41% Similarity=0.948 Sum_probs=28.8
Q ss_pred eCCCCCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 105 DADECVNRPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 105 ~~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
++++|...+|.+++.|++..++|.|.|++||.
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~ 33 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE 33 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCc
Confidence 57788888999999999999999999999984
No 50
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.44 E-value=1.1e-07 Score=66.25 Aligned_cols=102 Identities=28% Similarity=0.628 Sum_probs=64.7
Q ss_pred CCCCCCCCCCCCeeeeCCCCeE---eeCCCCCccCCCCCcc------cCCcccCCCCCCCCCCCCeeeecCCCeeeeCC-
Q psy2856 22 ECAHPNACGVNALCQNYPGNYT---CSCQPGYTGNPFEGCI------DIDECQYASTHPVCGPGARCTNFPGGYHCECP- 91 (136)
Q Consensus 22 ~c~~~~~~~~~~~C~~~~g~~~---C~c~~g~~~~~~~~c~------~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~- 91 (136)
+|.. ++|.+.+.|.+..|.+. |.|.+||.|..++.-. ..+.|...+....|...+.|.. +.|.|.
T Consensus 436 ~C~~-~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~ 510 (690)
T 3fcs_B 436 ACQA-QAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHS 510 (690)
T ss_dssp GGGT-TCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECC
T ss_pred CCcC-CCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeec
Confidence 3443 67888889987778888 9999999998763100 0134543221123666667752 589999
Q ss_pred ---CCceeCCCCcceeeCCCCCC---CCCCCCCeeeecCCCeeEeCCCCC
Q psy2856 92 ---PGYHGDAFTTGCVDADECVN---RPCGKDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 92 ---~g~~~~~~~~~~~~~~~c~~---~~~~~~~~c~~~~g~~~c~C~~g~ 135 (136)
.||.|..+.. ++.+|.. ..|..++.|.+ +.|.|++||
T Consensus 511 ~~~~Gy~G~~Ce~---~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy 553 (690)
T 3fcs_B 511 SDFGKITGKYCEC---DDFSCVRYKGEMCSGHGQCSC----GDCLCDSDW 553 (690)
T ss_dssp CSSCCCBSTTSCB---CSSCCCBSSSSBGGGSEEEET----TEEEECTTE
T ss_pred CCCCCeeCCCcCc---ccCcCcCCCCCCCCCCCEecC----CeeECcCCC
Confidence 8998876531 4455653 24555667754 567777776
No 51
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.43 E-value=7.7e-11 Score=72.53 Aligned_cols=115 Identities=16% Similarity=0.119 Sum_probs=74.7
Q ss_pred eeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCc------ccCCC-------------------CC
Q psy2856 16 VFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDE------CQYAS-------------------TH 70 (136)
Q Consensus 16 ~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~------c~~~~-------------------~~ 70 (136)
.|.+.++|.. .+|.+.++|++...+|.|.|+.||++..++. ++++ +...+ ..
T Consensus 95 ~c~~~~eC~s-~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~--~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~ 171 (267)
T 4fbr_A 95 RDKQNIVAVS-IKSNDGGKTLTGTTTYNGEGPIGFKSEVTDG--DTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVD 171 (267)
T ss_dssp CSSCCEEEEE-EECSSTTSEEEEEEEETTSCCEEEEEEECCC--CEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEE
T ss_pred ccccccccCC-CCCCCCCEEecCCccEEeeCCCCccccCCCC--CcccccccCCcCCccccCCcceecccccccccccCC
Confidence 3444555653 6789999999999999999999998854421 1111 10000 00
Q ss_pred CCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCC---------------------CCC--------CCCCCCCeee
Q psy2856 71 PVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADE---------------------CVN--------RPCGKDALCS 121 (136)
Q Consensus 71 ~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~---------------------c~~--------~~~~~~~~c~ 121 (136)
.+|.++..|+....+|.|.|+.||.+..... ++++ |.. ..+...+.|+
T Consensus 172 ~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~---~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~ 248 (267)
T 4fbr_A 172 AKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP---DTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGKTL 248 (267)
T ss_dssp EECSSTTSEEEEEEEETTSCCEEEEEEEEET---TEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEE
T ss_pred CCCCCCCEeeCCCCCeEEeCCCCcccccccc---ccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCEee
Confidence 1266778888888899999999998754321 2222 110 0345567888
Q ss_pred ecCCCeeEeCCCCCC
Q psy2856 122 NVDGSYTCTCPPGFR 136 (136)
Q Consensus 122 ~~~g~~~c~C~~g~~ 136 (136)
+...+|.|.|++||+
T Consensus 249 dg~~sy~CeCp~GF~ 263 (267)
T 4fbr_A 249 AGTMIYNGEGPIGFR 263 (267)
T ss_dssp EEEEEETTSCCEEEE
T ss_pred CCCcceeecCCCCcc
Confidence 877889999998874
No 52
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.40 E-value=1.2e-06 Score=40.93 Aligned_cols=37 Identities=27% Similarity=0.696 Sum_probs=31.0
Q ss_pred eCCCCCCC--CCCCCCCeee--eCCCCeEeeCCCCCccCCC
Q psy2856 19 DINECAHP--NACGVNALCQ--NYPGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 19 ~~~~c~~~--~~~~~~~~C~--~~~g~~~C~c~~g~~~~~~ 55 (136)
++++|... ++|.+++.|. +..++|.|.|.+||.|..+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~C 42 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSS
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcC
Confidence 57888752 3899999999 7889999999999998754
No 53
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.39 E-value=4.7e-07 Score=42.49 Aligned_cols=38 Identities=26% Similarity=0.588 Sum_probs=31.1
Q ss_pred eeCCCCCCCCCCCCCCeee-----eCCCCeEeeCCCCCccCCCC
Q psy2856 18 VDINECAHPNACGVNALCQ-----NYPGNYTCSCQPGYTGNPFE 56 (136)
Q Consensus 18 ~~~~~c~~~~~~~~~~~C~-----~~~g~~~C~c~~g~~~~~~~ 56 (136)
.++|+|.. +||.++++|. +..++|.|.|++||.|..++
T Consensus 6 ~~~~eC~s-~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE 48 (55)
T 3u7u_G 6 VKCAEKEK-TFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ 48 (55)
T ss_dssp EECCSTTT-TTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred ccCCCCcC-CCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence 47899985 8999999994 55679999999999998654
No 54
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.20 E-value=6.2e-06 Score=54.63 Aligned_cols=99 Identities=29% Similarity=0.802 Sum_probs=62.5
Q ss_pred CCCCCCeeeeCCCCeEeeCCCCCccCCCCC-cccC-------CcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCC
Q psy2856 28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEG-CIDI-------DECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAF 99 (136)
Q Consensus 28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~-c~~~-------~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~ 99 (136)
+|.+++.|.+ +.+.|.|.+||.|..++. |.+- +.|... ..|.....|. .+.+.|.|.+||.+..+
T Consensus 204 ~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~---~~C~~~g~C~--~~~~~C~C~~G~~G~~C 276 (423)
T 2gy5_A 204 ACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQ---EGCKSYVFCL--PDPYGCSCATGWKGLQC 276 (423)
T ss_dssp CCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCST---TTTTTCCEEE--TTTTEEECCBTCBSGGG
T ss_pred CCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCC---CCCCCCCEEC--CCCCeEEeCCCcccccc
Confidence 6888889976 467999999999987642 2210 123211 1365556674 46789999999988655
Q ss_pred Ccceee---CCCCCCC-CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 100 TTGCVD---ADECVNR-PCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 100 ~~~~~~---~~~c~~~-~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
...|.+ -+.|... .|.+++.|.+.. .|.|++||.
T Consensus 277 ~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~ 314 (423)
T 2gy5_A 277 NEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQ 314 (423)
T ss_dssp CBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCB
T ss_pred cCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCc
Confidence 432221 1223222 566778887654 399999983
No 55
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.18 E-value=1.7e-07 Score=44.93 Aligned_cols=37 Identities=27% Similarity=0.708 Sum_probs=31.9
Q ss_pred eeeCCCCCCCCCCCCC--CeeeeCCCCeEeeCCCCCc-cCC
Q psy2856 17 FVDINECAHPNACGVN--ALCQNYPGNYTCSCQPGYT-GNP 54 (136)
Q Consensus 17 c~~~~~c~~~~~~~~~--~~C~~~~g~~~C~c~~g~~-~~~ 54 (136)
+.++|+|.. +||.++ +.|.+..++|.|.|++||. |..
T Consensus 8 ~~~~d~C~s-nPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~ 47 (61)
T 2k2s_B 8 SETPAACSS-NPCGPEAAGTCKETNSGYICRCNQGYRISLD 47 (61)
T ss_dssp TTSCCHHHH-CSSCSSSCCEEEECSSEEEEECCTTEEEEEC
T ss_pred cCCCCcCcC-CCCcCCCccccccCCCceEeECCCCCccCCC
Confidence 567788874 889888 7999999999999999998 764
No 56
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.17 E-value=2.6e-06 Score=39.68 Aligned_cols=35 Identities=51% Similarity=1.157 Sum_probs=28.4
Q ss_pred eeCCCCCCC---------CCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856 18 VDINECAHP---------NACGVNALCQNYPGNYTCSCQPGYTGNP 54 (136)
Q Consensus 18 ~~~~~c~~~---------~~~~~~~~C~~~~g~~~C~c~~g~~~~~ 54 (136)
.|+|+|... .+|. +.|.|+.|+|.|.|.+||.+..
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence 478999752 4564 6999999999999999998754
No 57
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=98.15 E-value=2.4e-06 Score=42.36 Aligned_cols=36 Identities=33% Similarity=0.658 Sum_probs=28.0
Q ss_pred eeCCCCCC-CCCCCCCCeeeeCCCCeEee-CCCCCccC
Q psy2856 18 VDINECAH-PNACGVNALCQNYPGNYTCS-CQPGYTGN 53 (136)
Q Consensus 18 ~~~~~c~~-~~~~~~~~~C~~~~g~~~C~-c~~g~~~~ 53 (136)
.|||||.. +++|...+.|+|+.|+|.|. +..||.+.
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 37899974 34787778999999999997 45577654
No 58
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.14 E-value=8.6e-06 Score=52.15 Aligned_cols=85 Identities=29% Similarity=0.790 Sum_probs=50.8
Q ss_pred CCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeC
Q psy2856 27 NACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDA 106 (136)
Q Consensus 27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~ 106 (136)
++|.+++.|.+ .+.|.|.+||.|..+. . ..|.. .|.+++.|.. .+.|.|.+||.+..+..
T Consensus 153 ~~C~~~G~C~~---~~~C~C~~G~~G~~C~---~-~~C~~-----~C~~~G~C~~---~~~C~C~~G~~G~~C~~----- 212 (324)
T 2ygq_A 153 GGCRNGGFCNE---RRICECPDGFHGPHCE---K-ALCTP-----RCMNGGLCVT---PGFCICPPGFYGVNCDK----- 212 (324)
T ss_dssp SCCCSSCEECT---TSCEECCTTEESSSSC---E-ESSSS-----CCCTTCEECS---SCCEECCTTCBTTTTCB-----
T ss_pred CCCCCCCEECC---CCeEECCCCCcCCCCC---C-CCCCC-----CCCCCCEEcC---CCEEeCCCCccCCCccc-----
Confidence 46888888864 4789999999987543 1 23431 2666667753 35688888887765421
Q ss_pred CCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856 107 DECVNRPCGKDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 107 ~~c~~~~~~~~~~c~~~~g~~~c~C~~g~ 135 (136)
+.|. ..|..++.|++ .+.|.|++||
T Consensus 213 ~~C~-~~C~~~G~C~~---~~~C~C~~G~ 237 (324)
T 2ygq_A 213 ANCS-TTCFNGGTCFY---PGKCICPPGL 237 (324)
T ss_dssp CCCS-SCCCSSCCBSC---SSCBCCCTTC
T ss_pred CcCC-CCCCCCCeeCC---CCeeeCCCCc
Confidence 2232 23444455543 2356666655
No 59
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.08 E-value=2.2e-06 Score=42.17 Aligned_cols=46 Identities=26% Similarity=0.564 Sum_probs=35.1
Q ss_pred eeCCCCCCCC-CCCCCCeeeeCCC-CeEeeCCCCCccCCC-CCcccCCccc
Q psy2856 18 VDINECAHPN-ACGVNALCQNYPG-NYTCSCQPGYTGNPF-EGCIDIDECQ 65 (136)
Q Consensus 18 ~~~~~c~~~~-~~~~~~~C~~~~g-~~~C~c~~g~~~~~~-~~c~~~~~c~ 65 (136)
.|+++|...+ .| ...|.++.| +|.|.|..||..... .+|.++++|.
T Consensus 3 ~d~~eC~~~nggC--~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENGGC--EQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGGGC--SSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred cccccccCCCCCc--CCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 5789997533 34 578999998 899999999986543 6677777663
No 60
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.07 E-value=2.9e-06 Score=39.90 Aligned_cols=43 Identities=26% Similarity=0.635 Sum_probs=31.8
Q ss_pred CCCCCC-CCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCccc
Q psy2856 21 NECAHP-NACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDECQ 65 (136)
Q Consensus 21 ~~c~~~-~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c~ 65 (136)
|+|... ..| .+.|.|++|+|.|.|.+||..... ..|.++++|.
T Consensus 2 dEC~~~~~~C--~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDC--DQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGC--SSEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCc--CcEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 667642 245 358999999999999999986533 5677777764
No 61
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.04 E-value=6.1e-06 Score=38.40 Aligned_cols=32 Identities=44% Similarity=0.968 Sum_probs=24.1
Q ss_pred eCCCCCCC--------CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 105 DADECVNR--------PCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 105 ~~~~c~~~--------~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
+++||... .....+.|+|+.|+|.|.|++||.
T Consensus 3 DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~ 42 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE 42 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCE
T ss_pred ccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCe
Confidence 67778652 122347999999999999999983
No 62
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.03 E-value=1.2e-05 Score=36.10 Aligned_cols=28 Identities=29% Similarity=0.655 Sum_probs=24.6
Q ss_pred CCCCCCeee--eCCCCeEeeCCCCCccCCC
Q psy2856 28 ACGVNALCQ--NYPGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 28 ~~~~~~~C~--~~~g~~~C~c~~g~~~~~~ 55 (136)
+|.+++.|. +..++|.|.|++||.|..+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~C 39 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRC 39 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTT
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcC
Confidence 899999998 6778999999999998754
No 63
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.01 E-value=1.3e-06 Score=41.93 Aligned_cols=34 Identities=29% Similarity=0.957 Sum_probs=29.1
Q ss_pred eeeCCCCCCCCCCCC--CeeeecCCCeeEeCCCCCC
Q psy2856 103 CVDADECVNRPCGKD--ALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 103 ~~~~~~c~~~~~~~~--~~c~~~~g~~~c~C~~g~~ 136 (136)
+.++++|.+.+|.++ +.|++..++|.|.|++||.
T Consensus 8 ~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 8 SETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp TTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred cCCCCcCcCCCCcCCCccccccCCCceEeECCCCCc
Confidence 346778888889887 7999999999999999983
No 64
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.01 E-value=1.1e-05 Score=56.33 Aligned_cols=92 Identities=25% Similarity=0.586 Sum_probs=64.4
Q ss_pred CCCCCCeeeeCCCCeEeeCC----CCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcce
Q psy2856 28 ACGVNALCQNYPGNYTCSCQ----PGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGC 103 (136)
Q Consensus 28 ~~~~~~~C~~~~g~~~C~c~----~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~ 103 (136)
+|.+++.|.+ +.|.|. +||.|..++ .+...|.... ...|...+.|.. +.|.|..||.|..+. |
T Consensus 494 ~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce--~~~~~C~~~~-~~~C~~~G~C~~----g~C~C~~Gy~G~~Ce--C 560 (690)
T 3fcs_B 494 VCSQRGECLC----GQCVCHSSDFGKITGKYCE--CDDFSCVRYK-GEMCSGHGQCSC----GDCLCDSDWTGYYCN--C 560 (690)
T ss_dssp GGGGSEEECS----SSEEECCCSSCCCBSTTSC--BCSSCCCBSS-SSBGGGSEEEET----TEEEECTTEESSSSC--E
T ss_pred CCCCCCEEEC----CeeEeecCCCCCeeCCCcC--cccCcCcCCC-CCCCCCCCEecC----CeeECcCCCcCCCCc--c
Confidence 4777788863 589999 999998754 2455565321 113666677864 689999999998764 2
Q ss_pred -eeCCCCCC---CCCCCCCeeeecCCCeeEeC-CCCCC
Q psy2856 104 -VDADECVN---RPCGKDALCSNVDGSYTCTC-PPGFR 136 (136)
Q Consensus 104 -~~~~~c~~---~~~~~~~~c~~~~g~~~c~C-~~g~~ 136 (136)
.++++|.. ..|..++.|++ ..|.| ++||.
T Consensus 561 ~~~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~ 594 (690)
T 3fcs_B 561 TTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSY 594 (690)
T ss_dssp ECCCTTTBCTTSSBTSSSCEEET----TEEECCSTTCB
T ss_pred CCCCCcccCCCCCCCCCCCEEeC----CEEECCCCCcc
Confidence 24667765 36888889964 28999 88883
No 65
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.01 E-value=6.1e-06 Score=38.67 Aligned_cols=32 Identities=28% Similarity=0.584 Sum_probs=27.0
Q ss_pred eeCCCCCCCCCCCCCeee-----ecCCCeeEeCCCCC
Q psy2856 104 VDADECVNRPCGKDALCS-----NVDGSYTCTCPPGF 135 (136)
Q Consensus 104 ~~~~~c~~~~~~~~~~c~-----~~~g~~~c~C~~g~ 135 (136)
.+++||.+.+|.+++.|. +..++|.|.|++||
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~ 42 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEF 42 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTE
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCC
Confidence 478999999999999994 55678999999998
No 66
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=97.99 E-value=9.8e-06 Score=51.88 Aligned_cols=56 Identities=32% Similarity=0.803 Sum_probs=32.4
Q ss_pred CCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCC
Q psy2856 28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDA 98 (136)
Q Consensus 28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~ 98 (136)
+|.+++.|.. .+.|.|.+||.|..+. ...|. . .|..++.|.. .+.|.|.+||.+..
T Consensus 186 ~C~~~G~C~~---~~~C~C~~G~~G~~C~----~~~C~-~----~C~~~G~C~~---~~~C~C~~G~~G~~ 241 (324)
T 2ygq_A 186 RCMNGGLCVT---PGFCICPPGFYGVNCD----KANCS-T----TCFNGGTCFY---PGKCICPPGLEGEQ 241 (324)
T ss_dssp CCCTTCEECS---SCCEECCTTCBTTTTC----BCCCS-S----CCCSSCCBSC---SSCBCCCTTCCTTT
T ss_pred CCCCCCEEcC---CCEEeCCCCccCCCcc----cCcCC-C----CCCCCCeeCC---CCeeeCCCCccCCC
Confidence 4666777754 4689999999887542 12232 1 2544455543 24566666666543
No 67
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.98 E-value=1.1e-05 Score=37.54 Aligned_cols=32 Identities=28% Similarity=0.663 Sum_probs=27.0
Q ss_pred eCCCCCCC---CCCCCCeee--ecCCCeeEeCCCCCC
Q psy2856 105 DADECVNR---PCGKDALCS--NVDGSYTCTCPPGFR 136 (136)
Q Consensus 105 ~~~~c~~~---~~~~~~~c~--~~~g~~~c~C~~g~~ 136 (136)
++++|.+. +|.+++.|+ +..++|.|.|++||.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~ 38 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS 38 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc
Confidence 46778775 788889999 788999999999984
No 68
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.96 E-value=1.7e-05 Score=39.01 Aligned_cols=48 Identities=25% Similarity=0.414 Sum_probs=36.5
Q ss_pred ccCCcccCCCCCCCCCCCCeeeecCC-CeeeeCCCCceeCCCCcceeeCCCCC
Q psy2856 59 IDIDECQYASTHPVCGPGARCTNFPG-GYHCECPPGYHGDAFTTGCVDADECV 110 (136)
Q Consensus 59 ~~~~~c~~~~~~~~c~~~~~c~~~~~-~~~c~c~~g~~~~~~~~~~~~~~~c~ 110 (136)
.++++|...++ .| ...|.+..+ +|.|.|..||.+......|.+++|+.
T Consensus 3 ~d~~eC~~~ng--gC--~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENG--GC--EQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGG--GC--SSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred cccccccCCCC--Cc--CCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 45666754431 14 468999888 79999999999887777899999874
No 69
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.96 E-value=2.2e-06 Score=48.71 Aligned_cols=57 Identities=35% Similarity=0.691 Sum_probs=42.6
Q ss_pred eEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCc
Q psy2856 42 YTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTT 101 (136)
Q Consensus 42 ~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~ 101 (136)
|.|.|.+||.+.....|.++++|...+. .|.+ ..|++..++|.|.|..||.+....+
T Consensus 88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~--~C~~-g~C~n~~g~y~C~C~~Gy~g~~~~~ 144 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCEDIDECEVFPG--VCKN-GLCVNTRGSFKCQCPSGMTLDATGR 144 (147)
T ss_dssp CCTTTCTTEEEEETTEEEECCHHHHSTT--CSSS-SEEEEETTEEEEECCTTCCBCTTSS
T ss_pred CcccCCCccccCCCCccCccccccCCCC--CCCC-CEEECCCCCEEeeCCCCCccCCCCC
Confidence 6789999997422235778999975332 3764 4899999999999999998865443
No 70
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.93 E-value=1.8e-05 Score=37.16 Aligned_cols=34 Identities=18% Similarity=0.415 Sum_probs=29.8
Q ss_pred CeeeecCCCeeeeCCCCceeCCCCcceeeCCCCC
Q psy2856 77 ARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV 110 (136)
Q Consensus 77 ~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~ 110 (136)
..|++..++|.|.|..||.+......|.++++|.
T Consensus 13 ~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 13 QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp SEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred cEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 5899999999999999999877777799999874
No 71
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.84 E-value=7.9e-06 Score=39.51 Aligned_cols=41 Identities=29% Similarity=0.582 Sum_probs=30.8
Q ss_pred CCCCCCCCCCCCCeeee-----CCCCeEeeCCCCCccCCCCCcccCCcc
Q psy2856 21 NECAHPNACGVNALCQN-----YPGNYTCSCQPGYTGNPFEGCIDIDEC 64 (136)
Q Consensus 21 ~~c~~~~~~~~~~~C~~-----~~g~~~C~c~~g~~~~~~~~c~~~~~c 64 (136)
++|. .++|.+++.|.+ ..++|.|.|++||.|..++ .+++.+
T Consensus 7 ~~C~-~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce--~~i~~~ 52 (63)
T 1hae_A 7 AEKE-KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT--ENVPMK 52 (63)
T ss_dssp CHHH-HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC--EECCSS
T ss_pred CCCC-CCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC--cCcCcc
Confidence 4554 378999999986 5689999999999997654 344444
No 72
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.84 E-value=1.4e-05 Score=36.00 Aligned_cols=36 Identities=28% Similarity=0.615 Sum_probs=28.3
Q ss_pred eCCCCCC--CCCCCCCCeeeeCC--CCeEeeCCCCCccCCC
Q psy2856 19 DINECAH--PNACGVNALCQNYP--GNYTCSCQPGYTGNPF 55 (136)
Q Consensus 19 ~~~~c~~--~~~~~~~~~C~~~~--g~~~C~c~~g~~~~~~ 55 (136)
++++|.. .++|.+ +.|.... ++|.|.|.+||.|..+
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~C 41 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRC 41 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTS
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCC
Confidence 5677864 268988 8998744 6899999999999754
No 73
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.82 E-value=3.2e-06 Score=52.67 Aligned_cols=45 Identities=31% Similarity=0.796 Sum_probs=33.3
Q ss_pred eeCCCCCC-CCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCc
Q psy2856 18 VDINECAH-PNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDE 63 (136)
Q Consensus 18 ~~~~~c~~-~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~ 63 (136)
.|+|||.. .+.|...+.|.|+.|+|.|.|++||.++.. .|.+++.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~-~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR-QCVAEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS-SEEETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC-cCCCCCC
Confidence 47899973 357888899999999999999999998763 4766554
No 74
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.80 E-value=2.1e-05 Score=45.69 Aligned_cols=61 Identities=31% Similarity=0.883 Sum_probs=45.6
Q ss_pred CCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeec-CCCeeeeCCCCceeCC
Q psy2856 29 CGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNF-PGGYHCECPPGYHGDA 98 (136)
Q Consensus 29 ~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~-~~~~~c~c~~g~~~~~ 98 (136)
|.+ +.|. +.+.|.|.+||.+..+. .++++|.... +|.++..|+.. .+++.|.|.+||.+..
T Consensus 105 C~~-g~C~---~~~~C~C~~G~~G~~C~--~~~~~C~~~~---~C~~~g~C~~~~~~~~~C~C~~G~~G~~ 166 (169)
T 2vj2_A 105 CVH-GICN---EPWQCLCETNWGGQLCD--KDLNYCGTHQ---PCLNGGTCSNTGPDKYQCSCPEGYSGPN 166 (169)
T ss_dssp CSS-EECS---STTCCEECTTEETTTTC--EESCHHHHTC---CCCTTCEEEECSTTCEEEECCTTCCSTT
T ss_pred CCC-CCcC---CCCEEeCCCCCCCCccc--CCCCCCCCCC---CCCCCCEEcCCCCCCcEeECCCCCcCcC
Confidence 543 3675 57899999999987543 3667776422 48888899986 7889999999998764
No 75
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.74 E-value=1.8e-05 Score=39.17 Aligned_cols=26 Identities=35% Similarity=0.819 Sum_probs=21.7
Q ss_pred eCCCCCCC--CCCCCCeeeecCCCeeEe
Q psy2856 105 DADECVNR--PCGKDALCSNVDGSYTCT 130 (136)
Q Consensus 105 ~~~~c~~~--~~~~~~~c~~~~g~~~c~ 130 (136)
+|+||... .|...+.|+|+.|+|.|.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~ 29 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCL 29 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEE
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEec
Confidence 67888754 576678999999999999
No 76
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.58 E-value=0.0001 Score=33.89 Aligned_cols=33 Identities=21% Similarity=0.497 Sum_probs=28.6
Q ss_pred CeeeecCCCeeeeCCCCceeCCCCcceeeCCCC
Q psy2856 77 ARCTNFPGGYHCECPPGYHGDAFTTGCVDADEC 109 (136)
Q Consensus 77 ~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c 109 (136)
..|++..++|.|.|..||.+......|.+++|+
T Consensus 10 ~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 10 QFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp SCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 468888999999999999987777779999876
No 77
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.52 E-value=0.00018 Score=33.39 Aligned_cols=34 Identities=26% Similarity=0.504 Sum_probs=29.3
Q ss_pred CeeeecCC-CeeeeCCCCceeCCCCcceeeCCCCC
Q psy2856 77 ARCTNFPG-GYHCECPPGYHGDAFTTGCVDADECV 110 (136)
Q Consensus 77 ~~c~~~~~-~~~c~c~~g~~~~~~~~~~~~~~~c~ 110 (136)
..|.+..+ +|.|.|..||.+......|.+++||.
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 57888888 79999999999887777899999873
No 78
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.51 E-value=6.1e-05 Score=34.68 Aligned_cols=33 Identities=21% Similarity=0.625 Sum_probs=26.0
Q ss_pred CCeeeeCCCCeEeeCCCCCccCCC-CCcccCCcc
Q psy2856 32 NALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDEC 64 (136)
Q Consensus 32 ~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c 64 (136)
.+.|+|+.|+|.|.|.+||..... .+|.+++++
T Consensus 9 ~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 9 DQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp SSCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CCEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 357999999999999999986533 567777665
No 79
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.48 E-value=0.00015 Score=32.41 Aligned_cols=28 Identities=25% Similarity=0.510 Sum_probs=22.4
Q ss_pred CCCCC---CCCCCCeee--ecCCCeeEeCCCCC
Q psy2856 108 ECVNR---PCGKDALCS--NVDGSYTCTCPPGF 135 (136)
Q Consensus 108 ~c~~~---~~~~~~~c~--~~~g~~~c~C~~g~ 135 (136)
+|... +|.+++.|+ +..++|.|.|++||
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~ 34 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGY 34 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCC
Confidence 34444 788889998 67789999999998
No 80
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.33 E-value=0.00015 Score=33.64 Aligned_cols=34 Identities=24% Similarity=0.545 Sum_probs=26.9
Q ss_pred CCeeeeCCC-CeEeeCCCCCccCCC-CCcccCCccc
Q psy2856 32 NALCQNYPG-NYTCSCQPGYTGNPF-EGCIDIDECQ 65 (136)
Q Consensus 32 ~~~C~~~~g-~~~C~c~~g~~~~~~-~~c~~~~~c~ 65 (136)
.+.|.++.+ +|.|.|.+||..... .+|.++++|.
T Consensus 10 ~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 10 EQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp SSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CCEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 457999998 799999999986543 6688877763
No 81
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.32 E-value=0.0013 Score=34.58 Aligned_cols=65 Identities=23% Similarity=0.455 Sum_probs=49.3
Q ss_pred CCCCCCeeee-CCCCeEeeCCCCCccCCCCCcccCCc-ccCCCCCCCCCCCCeeeecC-CCeeeeCCCCce
Q psy2856 28 ACGVNALCQN-YPGNYTCSCQPGYTGNPFEGCIDIDE-CQYASTHPVCGPGARCTNFP-GGYHCECPPGYH 95 (136)
Q Consensus 28 ~~~~~~~C~~-~~g~~~C~c~~g~~~~~~~~c~~~~~-c~~~~~~~~c~~~~~c~~~~-~~~~c~c~~g~~ 95 (136)
.|...+.|.. .+|...|.|..||++.. ..|.+.+. |....+ -|...+.|.... ....|.|..+|.
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg-~~Cv~~Np~C~~nNG--GCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEVG-GKCVPASITCEENNG--GCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEECS-SSEEECCCCTTSGGG--GSCTTSEEEECTTSCEEEECCSTTC
T ss_pred CCCCCCCeEECCCCCEeEEEECCeeccC-CEEEECCcchhhcCC--CcCCCcEeEECCCCEEEeECCCCCC
Confidence 4667889998 55888999999999875 45777777 654332 277888998775 677899998864
No 82
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.31 E-value=0.00013 Score=32.78 Aligned_cols=31 Identities=19% Similarity=0.552 Sum_probs=23.5
Q ss_pred eCCCCCC---CCCCCCCeeeecC--CCeeEeCCCCCC
Q psy2856 105 DADECVN---RPCGKDALCSNVD--GSYTCTCPPGFR 136 (136)
Q Consensus 105 ~~~~c~~---~~~~~~~~c~~~~--g~~~c~C~~g~~ 136 (136)
++++|.+ ..|.+ +.|+... ++|.|.|++||.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~Gyt 37 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYT 37 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCS
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCc
Confidence 3456766 57877 7998754 689999999984
No 83
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.22 E-value=0.0061 Score=32.10 Aligned_cols=61 Identities=25% Similarity=0.482 Sum_probs=47.0
Q ss_pred CCCCCeeee-cCCCeeeeCCCCceeCCCCcceeeCCC-CCCC--CCCCCCeeeecC-CCeeEeCCCCC
Q psy2856 73 CGPGARCTN-FPGGYHCECPPGYHGDAFTTGCVDADE-CVNR--PCGKDALCSNVD-GSYTCTCPPGF 135 (136)
Q Consensus 73 c~~~~~c~~-~~~~~~c~c~~g~~~~~~~~~~~~~~~-c~~~--~~~~~~~c~~~~-g~~~c~C~~g~ 135 (136)
|...+.|.. ..+...|+|..+|.+... .|..++. |... .|...+.|+.+. ....|.|..+|
T Consensus 18 Cp~NA~C~r~~~G~e~CrCl~gY~~dg~--~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 18 VPENAACYRYLDGTEEWRCLLGFKEVGG--KCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEEECSS--SEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred CCCCCCeEECCCCCEeEEEECCeeccCC--EEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence 556678877 567788999999998653 4777777 6544 688889999875 67889998876
No 84
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.19 E-value=0.00017 Score=33.44 Aligned_cols=31 Identities=26% Similarity=0.701 Sum_probs=25.8
Q ss_pred CCCCCCCCeee--eCCCCeEeeCCCCCccCCCC
Q psy2856 26 PNACGVNALCQ--NYPGNYTCSCQPGYTGNPFE 56 (136)
Q Consensus 26 ~~~~~~~~~C~--~~~g~~~C~c~~g~~~~~~~ 56 (136)
.++|.++++|. +..++|.|.|.+||.|..++
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence 36789999998 56788999999999998653
No 85
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=97.19 E-value=0.00067 Score=45.08 Aligned_cols=79 Identities=24% Similarity=0.703 Sum_probs=50.4
Q ss_pred EeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceee-------CCCCCC-CCC
Q psy2856 43 TCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVD-------ADECVN-RPC 114 (136)
Q Consensus 43 ~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~-------~~~c~~-~~~ 114 (136)
.|.|..||.|..+. . .|. +|.++..|.. ..+.|.|.+||.+..+...|.+ .++|.. ..|
T Consensus 186 ~c~C~~g~~G~~C~---~--~C~------~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C 252 (423)
T 2gy5_A 186 VRRCEAQKWGPECN---H--LCT------ACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGC 252 (423)
T ss_dssp ECSSCTTEESTTSC---E--ECC------CCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTT
T ss_pred CCcCCCCCCCCCCC---C--CCC------CCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCC
Confidence 46788888776542 1 231 2777778865 4568999999998876532211 013432 246
Q ss_pred CCCCeeeecCCCeeEeCCCCCC
Q psy2856 115 GKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 115 ~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
...+.|. .+.+.|.|++||.
T Consensus 253 ~~~g~C~--~~~~~C~C~~G~~ 272 (423)
T 2gy5_A 253 KSYVFCL--PDPYGCSCATGWK 272 (423)
T ss_dssp TTCCEEE--TTTTEEECCBTCB
T ss_pred CCCCEEC--CCCCeEEeCCCcc
Confidence 6566774 5678999999983
No 86
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.08 E-value=0.00043 Score=48.58 Aligned_cols=93 Identities=29% Similarity=0.695 Sum_probs=60.4
Q ss_pred CCCCCCeeeeCCCCeEeeCC------CCCccCCCCCcccCCcccCCCCCCCCCC--CCeeeecCCCeeeeCCCCceeCCC
Q psy2856 28 ACGVNALCQNYPGNYTCSCQ------PGYTGNPFEGCIDIDECQYASTHPVCGP--GARCTNFPGGYHCECPPGYHGDAF 99 (136)
Q Consensus 28 ~~~~~~~C~~~~g~~~C~c~------~g~~~~~~~~c~~~~~c~~~~~~~~c~~--~~~c~~~~~~~~c~c~~g~~~~~~ 99 (136)
+|.+++.|.. + .|.|. +||.|..++ .+...|.... ...|.. .+.|.. + .|.|.+||.|..+
T Consensus 483 ~Cs~~G~C~~--G--~C~C~~~~~~~~G~~G~~Ce--~~~~~C~~~~-~~~C~~~~~G~C~~--g--~C~C~~G~~G~~C 551 (687)
T 3k6s_B 483 ICSGLGDCVC--G--QCLCHTSDVPGKLIYGQYCE--CDTINCERYN-GQVCGGPGRGLCFC--G--KCRCHPGFEGSAC 551 (687)
T ss_dssp GGGSSEEEET--T--EEEECCCCSTTCCEESTTSC--EESSCSCEET-TEETSHHHHEEEET--T--EEEECTTCCSTTS
T ss_pred cCCCCCEEeC--C--EEEcCCCCCCCCCccccccc--cccccccCCC-CcCcCCCCCCeEEC--C--EEEcCCCCcCCCC
Confidence 4777788873 2 89999 999998754 2344554311 012554 566753 2 7999999999876
Q ss_pred CcceeeCCCCCCC---CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 100 TTGCVDADECVNR---PCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 100 ~~~~~~~~~c~~~---~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
.. -.+.+.|... .|..++.|.. ..|.|.+||.
T Consensus 552 ec-~~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~ 586 (687)
T 3k6s_B 552 QC-ERTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQ 586 (687)
T ss_dssp CS-CCSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCC
T ss_pred cc-CCCCCCCCCCCCCCCCCCCcCCC----CEEECCCCCc
Confidence 51 0134566643 5777788865 3699999984
No 87
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.07 E-value=0.0023 Score=30.27 Aligned_cols=33 Identities=24% Similarity=0.438 Sum_probs=27.0
Q ss_pred CCeeeecC-CCeeeeCCCCceeCCCCcceeeCCC
Q psy2856 76 GARCTNFP-GGYHCECPPGYHGDAFTTGCVDADE 108 (136)
Q Consensus 76 ~~~c~~~~-~~~~c~c~~g~~~~~~~~~~~~~~~ 108 (136)
...|++.. ++|.|.|..||.+......|.++++
T Consensus 10 ~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~ 43 (59)
T 2wph_E 10 EQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP 43 (59)
T ss_dssp SSEEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred CCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence 35788888 5999999999998877777887753
No 88
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.03 E-value=0.00054 Score=48.09 Aligned_cols=92 Identities=29% Similarity=0.726 Sum_probs=56.9
Q ss_pred CCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCC---------cccCCCCCCCCCCCCeeeecCCCeeeeCC------C
Q psy2856 28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDID---------ECQYASTHPVCGPGARCTNFPGGYHCECP------P 92 (136)
Q Consensus 28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~---------~c~~~~~~~~c~~~~~c~~~~~~~~c~c~------~ 92 (136)
+|..++.|. ...|.|.+||.|..++ | ..+ .|........|..++.|.. + .|.|. .
T Consensus 436 ~Cs~~G~C~----~g~C~C~~Gy~G~~Ce-c-~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~ 505 (687)
T 3k6s_B 436 LCHGKGFLE----CGICRCDTGYIGKNCE-C-QTQGRSSQELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGK 505 (687)
T ss_dssp TGGGSEEES----SSSEEECSSEESTTSC-E-ESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTC
T ss_pred CCCCCCEEe----CCEeEcCCCCcCCccc-c-cCCcCCccccCCCCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCC
Confidence 455555564 3479999999998764 1 111 3443221123666677762 2 89999 9
Q ss_pred CceeCCCCcceeeCCCCCCC---CCCC--CCeeeecCCCeeEeCCCCCC
Q psy2856 93 GYHGDAFTTGCVDADECVNR---PCGK--DALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 93 g~~~~~~~~~~~~~~~c~~~---~~~~--~~~c~~~~g~~~c~C~~g~~ 136 (136)
||.|..+.. +...|... .|.. ++.|.. + .|.|.+||.
T Consensus 506 G~~G~~Ce~---~~~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~~ 547 (687)
T 3k6s_B 506 LIYGQYCEC---DTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGFE 547 (687)
T ss_dssp CEESTTSCE---ESSCSCEETTEETSHHHHEEEET--T--EEEECTTCC
T ss_pred Ccccccccc---ccccccCCCCcCcCCCCCCeEEC--C--EEEcCCCCc
Confidence 999887642 44556532 4655 677763 2 799999884
No 89
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.03 E-value=0.00023 Score=34.27 Aligned_cols=30 Identities=30% Similarity=0.635 Sum_probs=24.5
Q ss_pred CCCCCCCCCCCCCeeee-----cCCCeeEeCCCCC
Q psy2856 106 ADECVNRPCGKDALCSN-----VDGSYTCTCPPGF 135 (136)
Q Consensus 106 ~~~c~~~~~~~~~~c~~-----~~g~~~c~C~~g~ 135 (136)
.++|...+|.+++.|++ ..++|.|.|++||
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf 40 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGF 40 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTE
T ss_pred cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCC
Confidence 35666678888899986 5688999999998
No 90
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.03 E-value=0.0024 Score=38.59 Aligned_cols=92 Identities=27% Similarity=0.646 Sum_probs=56.8
Q ss_pred CCCCCCeeeeCCCCeEeeCCCCCccCCCCCccc--------CCcccCCCCCCCCCCCCeeeecCCCeeeeCCCC------
Q psy2856 28 ACGVNALCQNYPGNYTCSCQPGYTGNPFEGCID--------IDECQYASTHPVCGPGARCTNFPGGYHCECPPG------ 93 (136)
Q Consensus 28 ~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~--------~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g------ 93 (136)
.|..++.|.. ..|.|.+||.|..++ |.. ...|.......+|...+.|.. ..|.|..|
T Consensus 97 ~Csg~G~C~~----g~C~C~~G~~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~ 167 (217)
T 2p28_B 97 LCHGKGFLEC----GICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKL 167 (217)
T ss_dssp TTTTSEEEET----TEEEECTTEESTTSC-EECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCC
T ss_pred ccCCCceEEC----CEEECCCCccCCccc-ccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCccc
Confidence 4666777763 489999999998764 211 012432211123655667762 37999999
Q ss_pred ceeCCCCcceeeCCCCCCC---CCCCC--CeeeecCCCeeEeCCCCC
Q psy2856 94 YHGDAFTTGCVDADECVNR---PCGKD--ALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 94 ~~~~~~~~~~~~~~~c~~~---~~~~~--~~c~~~~g~~~c~C~~g~ 135 (136)
|.+..+.. ++..|... .|..+ +.|.. ..|.|.+||
T Consensus 168 ~~G~~Ce~---~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~ 207 (217)
T 2p28_B 168 IYGQYCEC---DTINCERYNGQVCGGPGRGLCFC----GKCRCHPGF 207 (217)
T ss_dssp EESTTSCE---ESSCSCEETTEETTCTTTEEEET----TEEEECTTE
T ss_pred EECCCccc---CCccCCCCCCCCCCCCCCcEEeC----CeeECCCCC
Confidence 57765531 34556543 46555 78873 279999988
No 91
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.97 E-value=0.0013 Score=34.40 Aligned_cols=66 Identities=23% Similarity=0.531 Sum_probs=47.1
Q ss_pred CCCCCCCeeeeC-CCCeEeeCCCCCccCCCCCcccC--CcccCCCCCCCCCCCCeeeecC-----CCeeeeCCCCce
Q psy2856 27 NACGVNALCQNY-PGNYTCSCQPGYTGNPFEGCIDI--DECQYASTHPVCGPGARCTNFP-----GGYHCECPPGYH 95 (136)
Q Consensus 27 ~~~~~~~~C~~~-~g~~~C~c~~g~~~~~~~~c~~~--~~c~~~~~~~~c~~~~~c~~~~-----~~~~c~c~~g~~ 95 (136)
..|...+.|.+. .+...|.|.+||++.. ..|.+. ..|...++ -|...+.|.... +...|.|..++.
T Consensus 10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg-~~Cv~~~~~sC~~nNG--GCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 10 KQCPQNSGCFRHLDEREECKCLLNYKQEG-DKCVENPNPTCNENNG--GCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCCCTTEEEECCTTSCCEEEECTTEEEET-TEEEECSCCCSTTGGG--GCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CCCCCCCCeEEcCCCCEEEEecCCeecCC-CeEeeCCCCChhhcCC--CcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 345678889885 5889999999999875 456665 46665332 277778887664 467899988864
No 92
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=96.82 E-value=0.00069 Score=32.13 Aligned_cols=22 Identities=27% Similarity=0.829 Sum_probs=18.5
Q ss_pred CCCCeeeecC-CCeeEeCCCCCC
Q psy2856 115 GKDALCSNVD-GSYTCTCPPGFR 136 (136)
Q Consensus 115 ~~~~~c~~~~-g~~~c~C~~g~~ 136 (136)
...+.|+++. |+|.|.|++||.
T Consensus 8 gC~~~C~n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 8 RCEQFCKNSADNKVVCSCTEGYR 30 (59)
T ss_dssp GCSSEEEECSTTCEEEECCTTEE
T ss_pred CcCCEeEeCCCCCEEeeCCCCcE
Confidence 4568999998 699999999983
No 93
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.82 E-value=0.002 Score=37.28 Aligned_cols=37 Identities=35% Similarity=0.793 Sum_probs=28.9
Q ss_pred eeeeCCCCCCCCC----CCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856 16 VFVDINECAHPNA----CGVNALCQNYPGNYTCSCQPGYTGNP 54 (136)
Q Consensus 16 ~c~~~~~c~~~~~----~~~~~~C~~~~g~~~C~c~~g~~~~~ 54 (136)
.+.++++|..... |. ..|.++.|+|.|.|.+||....
T Consensus 120 ~~~di~eC~~~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~ 160 (170)
T 1szb_A 120 AAEDIDECQVAPGEAPTCD--HHCHNHLGGFYCSCRAGYVLHR 160 (170)
T ss_dssp EEEECCTTCCCTTSCCSSS--SEEEEETTEEEEECCTTEEECT
T ss_pred eccccCcccCCCCCCCccC--CccccCCCCEEEeCCCCcEECC
Confidence 4678999985332 53 4899999999999999998643
No 94
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.77 E-value=0.0027 Score=36.25 Aligned_cols=39 Identities=38% Similarity=0.756 Sum_probs=28.7
Q ss_pred eeeeCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2856 16 VFVDINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNP 54 (136)
Q Consensus 16 ~c~~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~ 54 (136)
.+.++++|..+........|.+..+++.|.|.+||....
T Consensus 113 ~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~ 151 (159)
T 1nzi_A 113 VATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHD 151 (159)
T ss_dssp EEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECT
T ss_pred ecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECC
Confidence 456889998532212246899999999999999998653
No 95
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.77 E-value=0.00068 Score=38.86 Aligned_cols=41 Identities=34% Similarity=0.815 Sum_probs=31.1
Q ss_pred CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCccc
Q psy2856 21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQ 65 (136)
Q Consensus 21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~ 65 (136)
++|. +.+|.+++.|.+..++|.|.|.+||.|.. |...++|.
T Consensus 120 ~~c~-~~~C~~~g~C~~~~~~~~c~C~~g~~G~~---Ce~~~~c~ 160 (162)
T 1g1s_A 120 ASCQ-DMSCSKQGECLETIGNYTCSCYPGFYGPE---CEYVRDDD 160 (162)
T ss_dssp CCCC-TTGGGGSEEEEECSSSEEEEECTTEESTT---SCEECC--
T ss_pred CCCc-CCCCCCCCEEecCCCCceEeCCCCCcCcc---cccCcccC
Confidence 4565 36788889999999999999999999875 44444553
No 96
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.74 E-value=0.00088 Score=30.85 Aligned_cols=29 Identities=28% Similarity=0.551 Sum_probs=23.9
Q ss_pred CCCCCCCeeee----CCCCeEeeCCCCCccCCC
Q psy2856 27 NACGVNALCQN----YPGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 27 ~~~~~~~~C~~----~~g~~~C~c~~g~~~~~~ 55 (136)
++|.+++.|.+ ..++|.|.|..||.|..+
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~C 46 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRC 46 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTS
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCC
Confidence 47888999986 346899999999999754
No 97
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.67 E-value=0.00099 Score=45.74 Aligned_cols=36 Identities=28% Similarity=0.770 Sum_probs=31.6
Q ss_pred CCCCCCCCCCCCCCeeee-CCCCeEeeCC-CCCccCCCC
Q psy2856 20 INECAHPNACGVNALCQN-YPGNYTCSCQ-PGYTGNPFE 56 (136)
Q Consensus 20 ~~~c~~~~~~~~~~~C~~-~~g~~~C~c~-~g~~~~~~~ 56 (136)
+|+|.. +||.+++.|.+ ..++|.|.|. .||.|..++
T Consensus 2 ~d~C~~-~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 2 VNPCCY-YPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCGGGG-CCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CCcCCC-CCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 477874 89999999999 8899999999 999998764
No 98
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.66 E-value=0.0081 Score=31.39 Aligned_cols=61 Identities=26% Similarity=0.642 Sum_probs=45.1
Q ss_pred CCCCCeeee-cCCCeeeeCCCCceeCCCCcceeeC--CCCCCC--CCCCCCeeeecC-----CCeeEeCCCCC
Q psy2856 73 CGPGARCTN-FPGGYHCECPPGYHGDAFTTGCVDA--DECVNR--PCGKDALCSNVD-----GSYTCTCPPGF 135 (136)
Q Consensus 73 c~~~~~c~~-~~~~~~c~c~~g~~~~~~~~~~~~~--~~c~~~--~~~~~~~c~~~~-----g~~~c~C~~g~ 135 (136)
|...+.|.. ..+...|+|..||.+... .|..+ ..|... .|...+.|+... +...|.|.+||
T Consensus 12 C~~NA~C~r~~~g~e~C~C~~gy~gdg~--~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 12 CPQNSGCFRHLDEREECKCLLNYKQEGD--KCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD 82 (99)
T ss_dssp CCTTEEEECCTTSCCEEEECTTEEEETT--EEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred CCCCCCeEEcCCCCEEEEecCCeecCCC--eEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence 555677755 357788999999998653 46666 467654 588889998774 56889999886
No 99
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.56 E-value=0.0024 Score=36.93 Aligned_cols=33 Identities=36% Similarity=0.777 Sum_probs=26.3
Q ss_pred eeeCCCCCCCCCC---CCCeeeecCCCeeEeCCCCC
Q psy2856 103 CVDADECVNRPCG---KDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 103 ~~~~~~c~~~~~~---~~~~c~~~~g~~~c~C~~g~ 135 (136)
+.++++|...... +.+.|.++.|+|.|.|++||
T Consensus 121 ~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy 156 (170)
T 1szb_A 121 AEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGY 156 (170)
T ss_dssp EEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTE
T ss_pred ccccCcccCCCCCCCccCCccccCCCCEEEeCCCCc
Confidence 5678899865421 44689999999999999998
No 100
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.46 E-value=0.0025 Score=44.06 Aligned_cols=36 Identities=28% Similarity=0.705 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCCCCeeee-CCCCeEeeCC-CCCccCCCC
Q psy2856 20 INECAHPNACGVNALCQN-YPGNYTCSCQ-PGYTGNPFE 56 (136)
Q Consensus 20 ~~~c~~~~~~~~~~~C~~-~~g~~~C~c~-~g~~~~~~~ 56 (136)
+|+|.. +||.+++.|.+ ..++|.|.|. +||.|..++
T Consensus 1 vd~C~s-~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCS-NPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CCTTTT-CCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCC-CCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 478885 89999999996 4589999999 999998764
No 101
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.37 E-value=0.0015 Score=40.87 Aligned_cols=46 Identities=24% Similarity=0.714 Sum_probs=32.0
Q ss_pred ccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCC
Q psy2856 59 IDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADE 108 (136)
Q Consensus 59 ~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~ 108 (136)
.++++|....+ .|...+.|.+..++|.|.|..||.+... .|.++++
T Consensus 3 ~DiDEC~~~~~--~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~--~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRH--QCSVHAECRDYATGFCCRCVANYTGNGR--QCVAEGS 48 (285)
T ss_dssp ----CHHHHGG--GSCTTEEEEECSSCEEEEECTTEEECSS--SEEETTC
T ss_pred ccchhccCCCC--CCCCCCEeEcCCCCeEEEcCCCCCCCCC--cCCCCCC
Confidence 35667764221 3777789999999999999999997654 4777764
No 102
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.34 E-value=0.00059 Score=45.86 Aligned_cols=72 Identities=25% Similarity=0.641 Sum_probs=29.4
Q ss_pred EeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCCCCCCCCCeeee
Q psy2856 43 TCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVNRPCGKDALCSN 122 (136)
Q Consensus 43 ~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~~~~~~~~~c~~ 122 (136)
...|..+|.+..+. ...|.. . |.+ ..|.. ...|.|..||.+..+. +++|.. .|.+++.|++
T Consensus 378 p~~C~~~~~g~~c~----~~~C~~-~----C~n-G~C~~---~~~C~C~~G~~G~~C~-----~~~C~~-~C~~~g~C~~ 438 (463)
T 2wg3_C 378 PEECRATVQPAQTL----TSECSR-L----CRN-GYCTP---TGKCCCSPGWEGDFCR-----TAKCEP-ACRHGGVCVR 438 (463)
T ss_dssp CGGGCCCCCCCCCC----CCHHHH-H----CCS-EEECT---TSCEEECTTEESTTSC-----EECC-------------
T ss_pred cccCCCCCcCCCCc----cccccC-C----CCC-CccCC---CCeECCCCCcCCCcCC-----cCcCCC-CCCCCCEECC
Confidence 34566676665432 234542 2 654 57753 2479999999987652 345765 7777788875
Q ss_pred cCCCeeEeCCCCCC
Q psy2856 123 VDGSYTCTCPPGFR 136 (136)
Q Consensus 123 ~~g~~~c~C~~g~~ 136 (136)
. +.|.|++||.
T Consensus 439 ~---~~C~C~~G~~ 449 (463)
T 2wg3_C 439 P---NKCLCKKGYL 449 (463)
T ss_dssp --------------
T ss_pred C---CEEECCCCcc
Confidence 4 5899999984
No 103
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.95 E-value=0.0065 Score=38.08 Aligned_cols=47 Identities=32% Similarity=0.675 Sum_probs=32.1
Q ss_pred eCCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccCCccc
Q psy2856 19 DINECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDIDECQ 65 (136)
Q Consensus 19 ~~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~~~c~ 65 (136)
++|||...+.-.....|.++.++|.|.|..||..... ..|.+.++|.
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 4688975412233678999999999999999976543 5576655543
No 104
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.95 E-value=0.004 Score=40.22 Aligned_cols=40 Identities=35% Similarity=0.852 Sum_probs=21.6
Q ss_pred CCCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCcccC
Q psy2856 20 INECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF-EGCIDI 61 (136)
Q Consensus 20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~-~~c~~~ 61 (136)
+|||.....| ...|.|+.|+|.|.|.+||..... ..|...
T Consensus 1 i~ec~~~~~C--~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~ 41 (349)
T 3v64_C 1 VNECAEEGYC--SQGCTNSEGAFQCWCEAGYELRPDRRSCKAL 41 (349)
T ss_dssp --------CC--SSEECCC---CCEECCTTEEECTTSSCEEES
T ss_pred CcccCCCCCC--cCeeecCCCCeEEECCCCccCCCCCCccccc
Confidence 4778633345 568999999999999999986543 456543
No 105
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.91 E-value=0.0036 Score=29.51 Aligned_cols=28 Identities=29% Similarity=0.613 Sum_probs=22.9
Q ss_pred CCCCCCeeee----CCCCeEeeCCCCCccCCC
Q psy2856 28 ACGVNALCQN----YPGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 28 ~~~~~~~C~~----~~g~~~C~c~~g~~~~~~ 55 (136)
+|.+++.|.. ..+.|.|.|.+||.|..+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~C 46 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRC 46 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSS
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCC
Confidence 7888999983 345789999999999765
No 106
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.53 E-value=0.019 Score=32.63 Aligned_cols=34 Identities=32% Similarity=0.815 Sum_probs=25.9
Q ss_pred eeeCCCCCCC-CCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 103 CVDADECVNR-PCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 103 ~~~~~~c~~~-~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
+.++++|... ...+.+.|.++.+++.|.|.+||.
T Consensus 114 ~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 114 ATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp EEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCE
T ss_pred cccCcccCCCCCCCCCCcccCcCCCEEEecCCCcE
Confidence 4578889754 223457899999999999999983
No 107
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.47 E-value=0.0068 Score=34.65 Aligned_cols=35 Identities=29% Similarity=0.767 Sum_probs=26.7
Q ss_pred CCCCCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCCC
Q psy2856 73 CGPGARCTNFPGGYHCECPPGYHGDAFTTGCVDADECVN 111 (136)
Q Consensus 73 c~~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~~ 111 (136)
|...+.|.+..+.|.|.|.+||.|.. |..+++|..
T Consensus 127 C~~~g~C~~~~~~~~c~C~~g~~G~~----Ce~~~~c~~ 161 (162)
T 1g1s_A 127 CSKQGECLETIGNYTCSCYPGFYGPE----CEYVRDDDD 161 (162)
T ss_dssp GGGSEEEEECSSSEEEEECTTEESTT----SCEECC---
T ss_pred CCCCCEEecCCCCceEeCCCCCcCcc----cccCcccCC
Confidence 77778899989999999999999865 556667753
No 108
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.42 E-value=0.0073 Score=27.84 Aligned_cols=24 Identities=29% Similarity=0.804 Sum_probs=19.5
Q ss_pred CCCCCCCeee--ecCCCeeEeCCCCC
Q psy2856 112 RPCGKDALCS--NVDGSYTCTCPPGF 135 (136)
Q Consensus 112 ~~~~~~~~c~--~~~g~~~c~C~~g~ 135 (136)
..|.+++.|+ +..++|.|.|++||
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~Gy 37 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGY 37 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTE
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCC
Confidence 3577778997 56778999999997
No 109
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=94.98 E-value=0.036 Score=34.71 Aligned_cols=35 Identities=29% Similarity=0.626 Sum_probs=28.9
Q ss_pred CCeeeecCCCeeeeCCCCceeCCCCcceeeCCCCC
Q psy2856 76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDADECV 110 (136)
Q Consensus 76 ~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~~c~ 110 (136)
...|.+..+++.|.|..||........|.+.++|.
T Consensus 14 ~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 14 QHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp SSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred CCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 46888888999999999999877777788877664
No 110
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.68 E-value=0.0093 Score=40.18 Aligned_cols=55 Identities=29% Similarity=0.783 Sum_probs=19.3
Q ss_pred CCCCCeeeeCCCCeEeeCCCCCccCCCCCcccCCcccCCCCCCCCCCCCeeeecCCCeeeeCCCCceeCCC
Q psy2856 29 CGVNALCQNYPGNYTCSCQPGYTGNPFEGCIDIDECQYASTHPVCGPGARCTNFPGGYHCECPPGYHGDAF 99 (136)
Q Consensus 29 ~~~~~~C~~~~g~~~C~c~~g~~~~~~~~c~~~~~c~~~~~~~~c~~~~~c~~~~~~~~c~c~~g~~~~~~ 99 (136)
|.+ +.|.+. ..|.|.+||.+..+. +..|.. + |.++..|... +.|.|..||.+..+
T Consensus 399 C~n-G~C~~~---~~C~C~~G~~G~~C~----~~~C~~-~----C~~~g~C~~~---~~C~C~~G~~G~~C 453 (463)
T 2wg3_C 399 CRN-GYCTPT---GKCCCSPGWEGDFCR----TAKCEP-A----CRHGGVCVRP---NKCLCKKGYLGPQC 453 (463)
T ss_dssp CCS-EEECTT---SCEEECTTEESTTSC----EECC-----------------------------------
T ss_pred CCC-CccCCC---CeECCCCCcCCCcCC----cCcCCC-C----CCCCCEECCC---CEEECCCCcccCCC
Confidence 554 678642 489999999997652 344643 3 7777788653 58999999988654
No 111
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=93.80 E-value=0.023 Score=38.87 Aligned_cols=51 Identities=25% Similarity=0.484 Sum_probs=12.4
Q ss_pred CeeeeCCCCceeCCCCcce--------eeCCCCCCCCCCCCCeeeec--CCCeeEeCCCCCC
Q psy2856 85 GYHCECPPGYHGDAFTTGC--------VDADECVNRPCGKDALCSNV--DGSYTCTCPPGFR 136 (136)
Q Consensus 85 ~~~c~c~~g~~~~~~~~~~--------~~~~~c~~~~~~~~~~c~~~--~g~~~c~C~~g~~ 136 (136)
...|.|..+|.+..+.. | .++++|.+-.|...+.+... .....|.|++||.
T Consensus 459 tg~C~C~~g~~G~~Ce~-C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~ 519 (525)
T 4aqs_A 459 TGYCYCKRLVTGQRCDQ-CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMI 519 (525)
T ss_dssp TCCBCBCTTCCSTTTCC---------------------------------------------
T ss_pred CCEEECCCCCcCCCccc-CCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCc
Confidence 34689999998876642 2 13445654455444433322 2234799999984
No 112
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.67 E-value=0.072 Score=30.39 Aligned_cols=29 Identities=34% Similarity=0.774 Sum_probs=25.6
Q ss_pred CCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856 27 NACGVNALCQNYPGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~~ 55 (136)
.+|...+.|.+..++|.|.|.+||.|..+
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~C 153 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYYGPQC 153 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCBSSSS
T ss_pred CcCCCCCeecccCCCceeeeCCCcccccc
Confidence 67888899999999999999999998753
No 113
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=93.16 E-value=0.1 Score=28.43 Aligned_cols=29 Identities=24% Similarity=0.554 Sum_probs=23.5
Q ss_pred CCCCCCeeeeCC--CCe-EeeCCCCCccCCCC
Q psy2856 28 ACGVNALCQNYP--GNY-TCSCQPGYTGNPFE 56 (136)
Q Consensus 28 ~~~~~~~C~~~~--g~~-~C~c~~g~~~~~~~ 56 (136)
+|.+++.|++.. ..+ .|.|.+||.|..++
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce 33 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 33 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCcccc
Confidence 578889998874 556 99999999997654
No 114
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=92.99 E-value=0.039 Score=31.20 Aligned_cols=34 Identities=32% Similarity=0.882 Sum_probs=27.4
Q ss_pred CCCCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856 21 NECAHPNACGVNALCQNYPGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 21 ~~c~~~~~~~~~~~C~~~~g~~~C~c~~g~~~~~~ 55 (136)
++|.. .+|.+.+.|.+....|.|.|.+||.|..+
T Consensus 120 ~~~~~-~pc~~~g~C~~~~~~~~c~C~~g~~g~~C 153 (157)
T 1g1t_A 120 AACTN-TSCSGHGECVETINNYTCKCDPGFSGLKC 153 (157)
T ss_dssp CCCCT-TGGGGSEEEEEETTEEEEEECTTEESTTS
T ss_pred CCCCC-CCCCCCCEeecCCCCeeEECCCCccCccc
Confidence 44543 57777899999999999999999998754
No 115
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=92.92 E-value=0.1 Score=36.04 Aligned_cols=36 Identities=31% Similarity=0.798 Sum_probs=29.6
Q ss_pred CCcccCCCCCCCCCCCCeeee-cCCCeeeeCC-CCceeCCCC
Q psy2856 61 IDECQYASTHPVCGPGARCTN-FPGGYHCECP-PGYHGDAFT 100 (136)
Q Consensus 61 ~~~c~~~~~~~~c~~~~~c~~-~~~~~~c~c~-~g~~~~~~~ 100 (136)
+++|...+ |.+++.|.. ..+.|.|.|. .||.|..+.
T Consensus 2 ~d~C~~~P----C~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYYP----CQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCGGGGCC----CCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CCcCCCCC----CCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 35676655 999999998 7889999999 999998764
No 116
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=92.78 E-value=0.15 Score=33.67 Aligned_cols=35 Identities=17% Similarity=0.650 Sum_probs=29.5
Q ss_pred CCCCCCCCCCCCCCeeeeCCCCeEeeCCC-CCccCCC
Q psy2856 20 INECAHPNACGVNALCQNYPGNYTCSCQP-GYTGNPF 55 (136)
Q Consensus 20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~~-g~~~~~~ 55 (136)
.+.|.. ++|.+++.|.+..+.|.|.|.. +|.|..+
T Consensus 185 ~~~C~~-~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C 220 (410)
T 3asi_A 185 STTCQE-DSCSNQGVCLQQWDGFSCDCSMTSFSGPLC 220 (410)
T ss_dssp SSCCCT-TSSSTTCEEEECSSSEEEECTTTSEESTTS
T ss_pred CCCccc-ccCCCCCEecCCCCCceEeccCCcccCCCC
Confidence 466764 8999999999999999999996 8887654
No 117
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=92.71 E-value=0.047 Score=36.34 Aligned_cols=27 Identities=26% Similarity=0.587 Sum_probs=19.6
Q ss_pred CeeeeCCCCeEeeCCCCCccCCCCCcc
Q psy2856 33 ALCQNYPGNYTCSCQPGYTGNPFEGCI 59 (136)
Q Consensus 33 ~~C~~~~g~~~C~c~~g~~~~~~~~c~ 59 (136)
..|....+.+.|.|..++.|..++.|.
T Consensus 304 s~C~~~~g~~~C~C~~~ttG~~CE~C~ 330 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTGPDCGKCK 330 (426)
T ss_dssp SCEEEETTEEEECCCTTEESSSSCEEC
T ss_pred hhcCCCCCCceeeCCCCCcCCCccccc
Confidence 568777777889988888876655443
No 118
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=92.58 E-value=0.12 Score=33.28 Aligned_cols=32 Identities=28% Similarity=0.624 Sum_probs=23.0
Q ss_pred CCeeeecCCCeeeeCCCCceeCCCCcceeeCC
Q psy2856 76 GARCTNFPGGYHCECPPGYHGDAFTTGCVDAD 107 (136)
Q Consensus 76 ~~~c~~~~~~~~c~c~~g~~~~~~~~~~~~~~ 107 (136)
...|.+..++|.|.|.+||...+....|...+
T Consensus 11 ~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~ 42 (349)
T 3v64_C 11 SQGCTNSEGAFQCWCEAGYELRPDRRSCKALG 42 (349)
T ss_dssp SSEECCC---CCEECCTTEEECTTSSCEEESS
T ss_pred cCeeecCCCCeEEECCCCccCCCCCCcccccc
Confidence 35898899999999999999876666676554
No 119
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=91.78 E-value=0.11 Score=36.41 Aligned_cols=31 Identities=29% Similarity=0.738 Sum_probs=25.7
Q ss_pred eCCCCCCCCCCCCCeeeecC-CCeeEeCCCCC
Q psy2856 105 DADECVNRPCGKDALCSNVD-GSYTCTCPPGF 135 (136)
Q Consensus 105 ~~~~c~~~~~~~~~~c~~~~-g~~~c~C~~g~ 135 (136)
.+++|......+++.|.+.. ++|.|.|+.||
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~ 295 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHY 295 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTC
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCc
Confidence 46778766556779999998 99999999998
No 120
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=91.57 E-value=0.87 Score=24.75 Aligned_cols=28 Identities=25% Similarity=0.719 Sum_probs=21.0
Q ss_pred CCCCCeeeecC--CCe-eeeCCCCceeCCCC
Q psy2856 73 CGPGARCTNFP--GGY-HCECPPGYHGDAFT 100 (136)
Q Consensus 73 c~~~~~c~~~~--~~~-~c~c~~g~~~~~~~ 100 (136)
|.++..|+... ..+ .|.|..+|.+..+.
T Consensus 3 C~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce 33 (122)
T 2fd6_A 3 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 33 (122)
T ss_dssp CCSSCEEEECTTTTTCEEEECCTTEESTTSC
T ss_pred CCCcCCcCCCcccCCCCCccCCCCCCCcccc
Confidence 67778887763 445 89999999887654
No 121
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=91.42 E-value=0.38 Score=21.77 Aligned_cols=37 Identities=30% Similarity=0.530 Sum_probs=25.6
Q ss_pred eeCCCCCC--CCCCCCCCeee--eCCCCeEeeCCCCCccCCC
Q psy2856 18 VDINECAH--PNACGVNALCQ--NYPGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 18 ~~~~~c~~--~~~~~~~~~C~--~~~g~~~C~c~~g~~~~~~ 55 (136)
...++|.. .+.|.+ +.|. ...+.+.|.|..||.|..+
T Consensus 7 ~~~~~C~~~~~~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RC 47 (50)
T 2rnl_A 7 GKKNPCNAEFQNFCIH-GECKYIEHLEAVTCKCQQEYFGERC 47 (50)
T ss_dssp SCCCTTTTTGGGTCSS-SEEEEETTTTEEEEECCSSCCSSSC
T ss_pred CcCcccCchhhCcCCC-CEEEEecCCCCeeEECCCCcccccc
Confidence 34566753 246776 5897 3456789999999998754
No 122
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=90.96 E-value=0.25 Score=34.47 Aligned_cols=35 Identities=26% Similarity=0.713 Sum_probs=27.5
Q ss_pred CcccCCCCCCCCCCCCeeee-cCCCeeeeCC-CCceeCCCC
Q psy2856 62 DECQYASTHPVCGPGARCTN-FPGGYHCECP-PGYHGDAFT 100 (136)
Q Consensus 62 ~~c~~~~~~~~c~~~~~c~~-~~~~~~c~c~-~g~~~~~~~ 100 (136)
++|...+ |.+++.|.. ..+.|.|.|. .||.|..+.
T Consensus 2 d~C~s~P----C~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 2 NPCCSNP----CQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CTTTTCC----CCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCC----CCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 4566544 999999985 4578999999 999987764
No 123
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=90.66 E-value=0.21 Score=31.70 Aligned_cols=32 Identities=28% Similarity=0.645 Sum_probs=23.6
Q ss_pred eCCCCCCC---CCCCCCeeeecC------CCeeEeCCCCCC
Q psy2856 105 DADECVNR---PCGKDALCSNVD------GSYTCTCPPGFR 136 (136)
Q Consensus 105 ~~~~c~~~---~~~~~~~c~~~~------g~~~c~C~~g~~ 136 (136)
..++|... ...+++.|.+++ ++|.|.|+.||+
T Consensus 266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~ 306 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGML 306 (316)
T ss_dssp CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCE
T ss_pred ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCE
Confidence 45677755 445678999875 579999999973
No 124
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=90.65 E-value=0.15 Score=25.50 Aligned_cols=35 Identities=26% Similarity=0.641 Sum_probs=23.3
Q ss_pred CCCCCC--CCCCCCCCeeeeC--CCCeEeeCCCCCccCCC
Q psy2856 20 INECAH--PNACGVNALCQNY--PGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 20 ~~~c~~--~~~~~~~~~C~~~--~g~~~C~c~~g~~~~~~ 55 (136)
.++|.. .+.|.++ .|... .+.+.|.|.+||.|..+
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RC 75 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERC 75 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTC
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccccc
Confidence 456652 2568775 89533 35789999999999754
No 125
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=90.03 E-value=0.28 Score=22.14 Aligned_cols=28 Identities=25% Similarity=0.589 Sum_probs=21.3
Q ss_pred CCCCCCCeee--eCCCCeEeeCCCCCccCCC
Q psy2856 27 NACGVNALCQ--NYPGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 27 ~~~~~~~~C~--~~~g~~~C~c~~g~~~~~~ 55 (136)
+.|.+ +.|. ...+.+.|.|..||.|..+
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RC 43 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARC 43 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTT
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCC
Confidence 46777 6885 3446789999999999764
No 126
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=89.64 E-value=0.54 Score=21.26 Aligned_cols=28 Identities=25% Similarity=0.622 Sum_probs=21.5
Q ss_pred CCCCCCCeeeeC--CCCeEeeCCCCCccCCC
Q psy2856 27 NACGVNALCQNY--PGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 27 ~~~~~~~~C~~~--~g~~~C~c~~g~~~~~~ 55 (136)
..|.++ .|... .+.+.|.|.+||.|..+
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RC 43 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARC 43 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCC
Confidence 467765 88753 36789999999999764
No 127
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=89.54 E-value=0.17 Score=34.63 Aligned_cols=54 Identities=26% Similarity=0.591 Sum_probs=13.5
Q ss_pred CeEeeCCCCCccCCCCCccc--------CCcccCCCCCCCCCCCCeeeec--CCCeeeeCCCCceeCC
Q psy2856 41 NYTCSCQPGYTGNPFEGCID--------IDECQYASTHPVCGPGARCTNF--PGGYHCECPPGYHGDA 98 (136)
Q Consensus 41 ~~~C~c~~g~~~~~~~~c~~--------~~~c~~~~~~~~c~~~~~c~~~--~~~~~c~c~~g~~~~~ 98 (136)
.+.|.|++||.|..++.|.+ .+.|..-. |.....+... .....|.|.+||.|..
T Consensus 459 tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~----C~~~gs~~~~C~~~tG~C~C~~G~~G~~ 522 (525)
T 4aqs_A 459 TGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCD----CDLGGALNNSCSEDSGQCSCLPHMIGRQ 522 (525)
T ss_dssp TCCBCBCTTCCSTTTCC---------------------------------------------------
T ss_pred CCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCC----CCCCCccCCccCCCCCeeECCCCCcCCC
Confidence 45799999999987654432 22232211 3332222211 1234688999988754
No 128
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=89.21 E-value=0.37 Score=30.71 Aligned_cols=31 Identities=29% Similarity=0.644 Sum_probs=23.0
Q ss_pred CCCCCCCCCCCCCeeeecCC--CeeEeCCCCCC
Q psy2856 106 ADECVNRPCGKDALCSNVDG--SYTCTCPPGFR 136 (136)
Q Consensus 106 ~~~c~~~~~~~~~~c~~~~g--~~~c~C~~g~~ 136 (136)
.++|......+++.|...++ +|.|.|+.||+
T Consensus 267 ~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~ 299 (318)
T 3sov_A 267 TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVK 299 (318)
T ss_dssp CCTTTTTGGGCSSEEEECSSTTSEEEECSTTCC
T ss_pred ccccccCCCCcceEEecCCCCCCeEEECCCCCE
Confidence 34566554556789998765 69999999974
No 129
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=89.16 E-value=0.26 Score=27.99 Aligned_cols=28 Identities=29% Similarity=0.833 Sum_probs=23.5
Q ss_pred CCCCCCCCCCeeeecCCCeeEeCCCCCC
Q psy2856 109 CVNRPCGKDALCSNVDGSYTCTCPPGFR 136 (136)
Q Consensus 109 c~~~~~~~~~~c~~~~g~~~c~C~~g~~ 136 (136)
|....|...+.|.+..++|.|.|.+||.
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~ 149 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGYY 149 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTCB
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCcc
Confidence 5555777789999999999999999983
No 130
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=88.90 E-value=0.35 Score=33.96 Aligned_cols=41 Identities=34% Similarity=0.734 Sum_probs=29.2
Q ss_pred eCCCCCCCCCCCCCCeeeeCC-CCeEeeCCCCCccCCC-CCccc
Q psy2856 19 DINECAHPNACGVNALCQNYP-GNYTCSCQPGYTGNPF-EGCID 60 (136)
Q Consensus 19 ~~~~c~~~~~~~~~~~C~~~~-g~~~C~c~~g~~~~~~-~~c~~ 60 (136)
++|+|...+. .....|.+.+ ++|.|.|..||..... ..|.+
T Consensus 264 ~~n~C~~~ng-~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 264 GWNECASSNG-HCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCCTTTTTGG-GCSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred cceEeccCCC-CcchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 5788875331 3357899998 9999999999976533 44543
No 131
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=88.88 E-value=0.17 Score=35.48 Aligned_cols=30 Identities=30% Similarity=0.744 Sum_probs=23.3
Q ss_pred CCCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856 106 ADECVNRPCGKDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 106 ~~~c~~~~~~~~~~c~~~~g~~~c~C~~g~ 135 (136)
.++|......+++.|.++++++.|.|+.||
T Consensus 578 ~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~ 607 (619)
T 3s94_A 578 SNPCAEENGGCSHLCLYRPQGLRCACPIGF 607 (619)
T ss_dssp CCGGGSGGGGCSSEEEEETTEEEEECCTTC
T ss_pred cccCCCCCCChhHhhccCCCCeEEECCCCC
Confidence 456665555667899999988999999887
No 132
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=88.55 E-value=0.32 Score=29.42 Aligned_cols=62 Identities=29% Similarity=0.592 Sum_probs=38.7
Q ss_pred CCCCCCCeeeeCCCCeEeeCCCC------CccCCCCCcccCCcccCCCCCCCCCCC--CeeeecCCCeeeeCCCCceeCC
Q psy2856 27 NACGVNALCQNYPGNYTCSCQPG------YTGNPFEGCIDIDECQYASTHPVCGPG--ARCTNFPGGYHCECPPGYHGDA 98 (136)
Q Consensus 27 ~~~~~~~~C~~~~g~~~C~c~~g------~~~~~~~~c~~~~~c~~~~~~~~c~~~--~~c~~~~~~~~c~c~~g~~~~~ 98 (136)
.+|..++.|.. ..|.|.+| |.|..++ .+...|..... .+|... +.|.. ..|.|..||.+..
T Consensus 143 ~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~~Ce--~~~~~C~~~~g-~~C~~~~~G~C~~----g~C~C~~G~~G~~ 211 (217)
T 2p28_B 143 IICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCE--CDTINCERYNG-QVCGGPGRGLCFC----GKCRCHPGFEGSA 211 (217)
T ss_dssp CBGGGTEEEET----TEEEECCCCSTTCCEESTTSC--EESSCSCEETT-EETTCTTTEEEET----TEEEECTTEESTT
T ss_pred CCCCCCCEEeC----CceECCCCCCCcccEECCCcc--cCCccCCCCCC-CCCCCCCCcEEeC----CeeECCCCCccCC
Confidence 45766778863 37999999 5666543 23344543210 125544 67763 2899999999875
Q ss_pred C
Q psy2856 99 F 99 (136)
Q Consensus 99 ~ 99 (136)
+
T Consensus 212 C 212 (217)
T 2p28_B 212 C 212 (217)
T ss_dssp S
T ss_pred c
Confidence 4
No 133
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=87.33 E-value=0.7 Score=29.26 Aligned_cols=34 Identities=32% Similarity=0.756 Sum_probs=24.2
Q ss_pred eCCCCCCC---C-CCCCCCeeeeCC------CCeEeeCCCCCccCC
Q psy2856 19 DINECAHP---N-ACGVNALCQNYP------GNYTCSCQPGYTGNP 54 (136)
Q Consensus 19 ~~~~c~~~---~-~~~~~~~C~~~~------g~~~C~c~~g~~~~~ 54 (136)
+.++|... + .| .+.|++.+ ++|.|.|+.||....
T Consensus 266 ~~n~C~~~~~~ng~C--s~~C~~~p~~~~~~~~~~C~C~~g~~l~~ 309 (316)
T 1ijq_A 266 GVNWCERTTLSNGGC--QYLCLPAPQINPHSPKFTCACPDGMLLAR 309 (316)
T ss_dssp CCCTTSSSSSGGGGC--SSEEEECCCCSTTCCSEEEECCTTCEECT
T ss_pred ccccccccccCCCCc--CcccCCCccccCCCCCeEeeCCCCCEECC
Confidence 56777642 2 34 46898875 589999999997653
No 134
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=87.28 E-value=0.64 Score=30.71 Aligned_cols=30 Identities=20% Similarity=0.742 Sum_probs=25.6
Q ss_pred CCCCCCCCCCCCCeeeecCCCeeEeCCC-CC
Q psy2856 106 ADECVNRPCGKDALCSNVDGSYTCTCPP-GF 135 (136)
Q Consensus 106 ~~~c~~~~~~~~~~c~~~~g~~~c~C~~-g~ 135 (136)
.+.|...+|.+++.|+....+|.|.|+. +|
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~ 215 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSF 215 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcc
Confidence 3578888899999999999999999985 55
No 135
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=86.83 E-value=0.66 Score=35.36 Aligned_cols=35 Identities=17% Similarity=0.674 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCCCCeeeeCCCCeEeeCC-CCCccCCC
Q psy2856 20 INECAHPNACGVNALCQNYPGNYTCSCQ-PGYTGNPF 55 (136)
Q Consensus 20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~-~g~~~~~~ 55 (136)
.+.|.. ++|.+++.|.....+|.|.|. ++|.|..+
T Consensus 1017 ~~~C~~-~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C 1052 (1245)
T 3qcw_A 1017 STTCQE-DSCSNQGVCLQQWDGFSCDCSMTSFSGPLC 1052 (1245)
T ss_dssp CCCCCT-TSSSSSCEEEEETTEEEEECTTSSCBSTTS
T ss_pred cCceEC-CcCCCCCEeCCCCCCCEEECCCCCCCCCCc
Confidence 356764 899999999999999999999 69998765
No 136
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=85.99 E-value=2.4 Score=21.89 Aligned_cols=65 Identities=22% Similarity=0.472 Sum_probs=44.7
Q ss_pred CCCCCCeeeeCC-CCeEeeCCCCCccCCCCCcccCC--cccCCCCCCCCCCCCeeeecC-CCeeeeCCCCce
Q psy2856 28 ACGVNALCQNYP-GNYTCSCQPGYTGNPFEGCIDID--ECQYASTHPVCGPGARCTNFP-GGYHCECPPGYH 95 (136)
Q Consensus 28 ~~~~~~~C~~~~-g~~~C~c~~g~~~~~~~~c~~~~--~c~~~~~~~~c~~~~~c~~~~-~~~~c~c~~g~~ 95 (136)
-|...+.|.... +.-.|+|..+|+-.. ..|...+ .|....+. |...+.|.... ....|.|...+.
T Consensus 11 kcp~NA~Cyr~~dg~EecRCllnykk~~-~kCV~~~~~~C~~NNGG--Cd~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 11 NVPENAACYRYLDGTEEWRCLLYFKEDA-GKCVPAPNMTCKDKNGG--CAPEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEEET-TEEEECTTCCTTTGGGG--SCTTSEEEECTTSCEEEECCSTTE
T ss_pred CCCCCcCeEEEcCCCEEEEEECCeEecC-CEEEcCCCCCccccCCC--cCCCcceeecCCCcEEEECCCCCC
Confidence 467788999875 678999999997643 3455443 45544432 67778887666 567788877654
No 137
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=85.97 E-value=0.21 Score=28.13 Aligned_cols=29 Identities=38% Similarity=0.998 Sum_probs=23.6
Q ss_pred CCCCCCCCCCCCeeeecCCCeeEeCCCCC
Q psy2856 107 DECVNRPCGKDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 107 ~~c~~~~~~~~~~c~~~~g~~~c~C~~g~ 135 (136)
++|...+|...+.|.+..+.|.|.|.+||
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~ 148 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGF 148 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTE
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCc
Confidence 44555567667899999999999999987
No 138
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=85.86 E-value=0.95 Score=26.67 Aligned_cols=26 Identities=23% Similarity=0.777 Sum_probs=21.2
Q ss_pred CCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2856 27 NACGVNALCQNYPGNYTCSCQPGYTGNPF 55 (136)
Q Consensus 27 ~~~~~~~~C~~~~g~~~C~c~~g~~~~~~ 55 (136)
.+|.+++.|.. ...|.|+.||.|..+
T Consensus 153 ~~C~ngG~Cv~---P~~C~C~~Gw~G~~C 178 (188)
T 2ygo_A 153 GGCRNGGFCNE---RRICECPDGFHGPHC 178 (188)
T ss_dssp TCCCTTCEECT---TSCEECCTTCBTTTT
T ss_pred CCCCCCCEeCC---CCcccCcCCCCCCCC
Confidence 47888999954 458999999999765
No 139
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=84.21 E-value=1.5 Score=27.86 Aligned_cols=33 Identities=33% Similarity=0.689 Sum_probs=23.3
Q ss_pred CCCCCCCC-CCCCCCeeeeCCC--CeEeeCCCCCccCC
Q psy2856 20 INECAHPN-ACGVNALCQNYPG--NYTCSCQPGYTGNP 54 (136)
Q Consensus 20 ~~~c~~~~-~~~~~~~C~~~~g--~~~C~c~~g~~~~~ 54 (136)
.++|...+ .| ...|...++ +|.|.|+.||....
T Consensus 267 ~n~C~~~ng~C--s~~C~~~~~~~~~~C~C~~g~~l~~ 302 (318)
T 3sov_A 267 TNPCGIDNGGC--SHLCLMSPVKPFYQCACPTGVKLLE 302 (318)
T ss_dssp CCTTTTTGGGC--SSEEEECSSTTSEEEECSTTCCBCT
T ss_pred ccccccCCCCc--ceEEecCCCCCCeEEECCCCCEECC
Confidence 46665422 34 568988775 69999999997754
No 140
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=83.59 E-value=0.91 Score=34.63 Aligned_cols=35 Identities=31% Similarity=0.835 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCCCCeeeeCCCCeEeeCC-CCCccCCC
Q psy2856 20 INECAHPNACGVNALCQNYPGNYTCSCQ-PGYTGNPF 55 (136)
Q Consensus 20 ~~~c~~~~~~~~~~~C~~~~g~~~C~c~-~g~~~~~~ 55 (136)
.+.|. ++||.+++.|.+....|.|.|. .||.|..+
T Consensus 619 ~~~C~-~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C 654 (1245)
T 3qcw_A 619 AKPCL-SNPCKNNGMCRDGWNRYVCDCSGTGYLGRSC 654 (1245)
T ss_dssp SCGGG-SCCCCTTCEEEECSSSEEEECTTTTEESTTS
T ss_pred CCCCC-ccCCCCCCEEeCCCCCeEEECCCCCcccccC
Confidence 35665 4799999999999999999999 79988765
No 141
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=82.15 E-value=1.7 Score=24.47 Aligned_cols=29 Identities=24% Similarity=0.517 Sum_probs=23.1
Q ss_pred CCCCCCeeeeC--CCCe-EeeCCCCCccCCCC
Q psy2856 28 ACGVNALCQNY--PGNY-TCSCQPGYTGNPFE 56 (136)
Q Consensus 28 ~~~~~~~C~~~--~g~~-~C~c~~g~~~~~~~ 56 (136)
+|.+++.|+.. ...+ .|.|..||.|..++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Ce 45 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 45 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCcee
Confidence 78999999875 2455 89999999997653
No 142
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=76.56 E-value=2 Score=29.74 Aligned_cols=28 Identities=32% Similarity=0.707 Sum_probs=23.7
Q ss_pred CCCCCCCeeeeCC-CCeEeeCCCCCccCC
Q psy2856 27 NACGVNALCQNYP-GNYTCSCQPGYTGNP 54 (136)
Q Consensus 27 ~~~~~~~~C~~~~-g~~~C~c~~g~~~~~ 54 (136)
++|..++.|+... +.|.|.|..||.+..
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~G 55 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAGNG 55 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEESSS
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCCCC
Confidence 5788899998876 678999999998764
No 143
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=75.14 E-value=2.6 Score=24.08 Aligned_cols=31 Identities=29% Similarity=0.693 Sum_probs=21.7
Q ss_pred CCCCCCeeeeCC--CCeEe-eCCCCCccCCCCCc
Q psy2856 28 ACGVNALCQNYP--GNYTC-SCQPGYTGNPFEGC 58 (136)
Q Consensus 28 ~~~~~~~C~~~~--g~~~C-~c~~g~~~~~~~~c 58 (136)
+|.+++.|.... +.+.| .|..+|.|..++.|
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C 35 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELC 35 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCEE
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCC
Confidence 356677887655 56788 68888888765544
No 144
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=73.15 E-value=3.6 Score=28.94 Aligned_cols=30 Identities=27% Similarity=0.614 Sum_probs=22.8
Q ss_pred CCCeeeecCCCeeeeCCCCceeCCCCccee
Q psy2856 75 PGARCTNFPGGYHCECPPGYHGDAFTTGCV 104 (136)
Q Consensus 75 ~~~~c~~~~~~~~c~c~~g~~~~~~~~~~~ 104 (136)
....|...++.+.|.|+.||........|.
T Consensus 588 C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 588 CSHLCLYRPQGLRCACPIGFELISDMKTCI 617 (619)
T ss_dssp CSSEEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred hhHhhccCCCCeEEECCCCCEECCCCCcCC
Confidence 346898888889999999998765444443
No 145
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=70.09 E-value=1.7 Score=17.53 Aligned_cols=22 Identities=36% Similarity=0.986 Sum_probs=14.7
Q ss_pred EeeCCCCCccCCCCCcccCCcc
Q psy2856 43 TCSCQPGYTGNPFEGCIDIDEC 64 (136)
Q Consensus 43 ~C~c~~g~~~~~~~~c~~~~~c 64 (136)
-|.|+.||..+....|.....|
T Consensus 6 GC~C~~G~vrn~~G~CV~~~~C 27 (32)
T 3ssb_I 6 KCYCEDGYARDVNGKCIPIKDC 27 (32)
T ss_dssp EEEECTTEEECTTSCEEEGGGC
T ss_pred CCCcCCCcEECCCCCEECHHHC
Confidence 4888999876654456655554
No 146
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=68.30 E-value=6.5 Score=24.36 Aligned_cols=31 Identities=42% Similarity=0.888 Sum_probs=21.9
Q ss_pred eCCCCCCC---CCCCCCeeeecCCCeeEeCCCCC
Q psy2856 105 DADECVNR---PCGKDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 105 ~~~~c~~~---~~~~~~~c~~~~g~~~c~C~~g~ 135 (136)
+.++|... .-.+.+.|.+..+++.|.|.+||
T Consensus 120 ~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy 153 (278)
T 3dem_A 120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGY 153 (278)
T ss_dssp ECCTTTC-----CCCSSEEEEETTEEEEECCTTC
T ss_pred ccccCCCCCCCcccCCcCcCCccCCcEEEeCCcc
Confidence 45566543 12345779999999999999987
No 147
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=57.74 E-value=18 Score=18.67 Aligned_cols=61 Identities=26% Similarity=0.520 Sum_probs=41.7
Q ss_pred CCCCCeeeecC-CCeeeeCCCCceeCCCCcceeeCC--CCCCC--CCCCCCeeeecC-CCeeEeCCCCC
Q psy2856 73 CGPGARCTNFP-GGYHCECPPGYHGDAFTTGCVDAD--ECVNR--PCGKDALCSNVD-GSYTCTCPPGF 135 (136)
Q Consensus 73 c~~~~~c~~~~-~~~~c~c~~g~~~~~~~~~~~~~~--~c~~~--~~~~~~~c~~~~-g~~~c~C~~g~ 135 (136)
|...+.|.... +...|+|..+|.-... .|+.-. .|... .|...+.|.... ....|.|...+
T Consensus 12 cp~NA~Cyr~~dg~EecRCllnykk~~~--kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 12 VPENAACYRYLDGTEEWRCLLYFKEDAG--KCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEEEETT--EEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred CCCCcCeEEEcCCCEEEEEECCeEecCC--EEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 55667787654 5778999999986432 254333 56644 677789998777 67789887543
No 148
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=51.26 E-value=8.6 Score=24.02 Aligned_cols=31 Identities=35% Similarity=0.778 Sum_probs=21.0
Q ss_pred eCCCCCCCC---CCCCCeeeecCCCeeEeCCCCC
Q psy2856 105 DADECVNRP---CGKDALCSNVDGSYTCTCPPGF 135 (136)
Q Consensus 105 ~~~~c~~~~---~~~~~~c~~~~g~~~c~C~~g~ 135 (136)
+.++|.... -.+.+.|.++.|++.|.|.+||
T Consensus 119 ~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy 152 (286)
T 1nt0_A 119 DVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGY 152 (286)
T ss_dssp ECCTTC-------CCSSEEEEETTEEEEECCTTE
T ss_pred cCCccCCCCCCcccCCCccccccCceEeecCCCc
Confidence 445665321 1245789999999999999987
No 149
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=34.94 E-value=10 Score=17.23 Aligned_cols=17 Identities=35% Similarity=0.907 Sum_probs=10.8
Q ss_pred EeeCCCCCccCCCCCcc
Q psy2856 43 TCSCQPGYTGNPFEGCI 59 (136)
Q Consensus 43 ~C~c~~g~~~~~~~~c~ 59 (136)
-|.|+.||..+....|+
T Consensus 35 GC~C~~G~v~~~~g~CV 51 (56)
T 1ccv_A 35 GCQCQEGFLRNGEGACV 51 (56)
T ss_dssp EEEECTTCEEETTTEEE
T ss_pred CCcCCCCeeECCCCccc
Confidence 48899998765422343
No 150
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=31.05 E-value=28 Score=15.86 Aligned_cols=18 Identities=22% Similarity=0.750 Sum_probs=10.4
Q ss_pred EeeCCCC--CccCCCCCccc
Q psy2856 43 TCSCQPG--YTGNPFEGCID 60 (136)
Q Consensus 43 ~C~c~~g--~~~~~~~~c~~ 60 (136)
-|.|+.| |.......|..
T Consensus 37 GC~C~~Gtv~v~~~~~~CV~ 56 (60)
T 1hx2_A 37 RCGCISGTVLKSKDSSECVH 56 (60)
T ss_dssp EEEECTTCEESSTTCSSEEC
T ss_pred CCCCCCCCeeEECCCCCEec
Confidence 5888888 65542233443
No 151
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=28.45 E-value=14 Score=18.19 Aligned_cols=23 Identities=26% Similarity=0.872 Sum_probs=15.6
Q ss_pred eEeeCCCCCccCCC-CCcccCCcc
Q psy2856 42 YTCSCQPGYTGNPF-EGCIDIDEC 64 (136)
Q Consensus 42 ~~C~c~~g~~~~~~-~~c~~~~~c 64 (136)
..|.|++||..+.. ..|+....|
T Consensus 47 ~GC~C~~G~vr~~~~g~CV~~~~C 70 (78)
T 2p3f_N 47 PACVCKDGFYRDTVIGDCVREEEC 70 (78)
T ss_dssp CEEEECSSCEEETTTTEEECGGGC
T ss_pred CCcCcCCCEeEcCCCCceECHHHC
Confidence 46899999977643 456655555
No 152
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=26.26 E-value=59 Score=22.66 Aligned_cols=13 Identities=38% Similarity=1.119 Sum_probs=9.6
Q ss_pred cCCCeeEeCCCCC
Q psy2856 123 VDGSYTCTCPPGF 135 (136)
Q Consensus 123 ~~g~~~c~C~~g~ 135 (136)
..|.+.|.|..+|
T Consensus 306 ~~Gs~~C~C~ng~ 318 (536)
T 3fl7_A 306 PEGATSCECEEGF 318 (536)
T ss_dssp CTTCSSCEECTTC
T ss_pred CCCccEEEEeccc
Confidence 3577788888776
No 153
>2h9e_C Anti-coagulant protein C2; factor XA, NAPC2, hydrolase-hydrolase inhibitor C blood clotting; HET: DTY; 2.20A {Ancylostoma caninum} SCOP: g.22.1.1 PDB: 1cou_A
Probab=20.81 E-value=15 Score=18.44 Aligned_cols=22 Identities=27% Similarity=0.961 Sum_probs=13.3
Q ss_pred EeeCCCCCccCCCCCcccCCcc
Q psy2856 43 TCSCQPGYTGNPFEGCIDIDEC 64 (136)
Q Consensus 43 ~C~c~~g~~~~~~~~c~~~~~c 64 (136)
.|.|+.||..+....|+....|
T Consensus 49 GC~C~~G~vr~~~g~CV~~~~C 70 (84)
T 2h9e_C 49 DCVCEEGFYRNKDDKCVSAEDC 70 (84)
T ss_dssp -CEECSSCEECTTCCEECHHHH
T ss_pred CCCCCCCeEEcCCCCEECHHHC
Confidence 5788888877643445554444
Done!