Query psy2857
Match_columns 332
No_of_seqs 188 out of 1483
Neff 10.3
Searched_HMMs 29240
Date Fri Aug 16 18:39:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2857.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2857hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z1y_A Ookinete surface protei 99.8 4.8E-22 1.6E-26 160.1 3.7 154 22-277 8-174 (186)
2 1z1y_A Ookinete surface protei 99.8 2.4E-21 8.2E-26 156.1 4.6 149 66-320 10-175 (186)
3 2vj3_A Neurogenic locus notch 99.8 1.2E-19 4.2E-24 138.0 11.8 131 56-293 2-132 (135)
4 2vj3_A Neurogenic locus notch 99.8 3.3E-19 1.1E-23 135.6 11.5 115 139-318 2-117 (135)
5 4fbr_A Lectin, myxobacterial h 99.8 1.4E-22 4.8E-27 167.5 -11.8 222 32-316 5-265 (267)
6 2bou_A EGF-like module contain 99.8 7E-19 2.4E-23 135.3 8.6 125 148-329 6-142 (143)
7 4d90_A EGF-like repeat and dis 99.7 6.9E-18 2.4E-22 129.9 11.0 123 144-320 2-133 (143)
8 1uzk_A Fibrillin-1; glycoprote 99.7 1.1E-18 3.9E-23 137.0 2.9 148 57-323 1-161 (162)
9 1uzk_A Fibrillin-1; glycoprote 99.7 3.9E-18 1.3E-22 134.0 1.5 145 17-181 1-161 (162)
10 1yo8_A Thrombospondin-2; EGF, 99.7 1.5E-16 5.3E-21 147.8 10.3 115 141-316 2-140 (634)
11 4d90_A EGF-like repeat and dis 99.7 4.2E-16 1.4E-20 119.9 9.8 113 20-179 1-133 (143)
12 1yo8_A Thrombospondin-2; EGF, 99.6 5.4E-16 1.9E-20 144.2 11.2 156 58-312 2-176 (634)
13 2bou_A EGF-like module contain 99.6 2.9E-16 9.9E-21 120.7 7.9 124 25-183 7-138 (143)
14 1dx5_I Thrombomodulin; serine 99.6 6.8E-17 2.3E-21 119.5 3.6 110 141-318 3-113 (118)
15 2vj2_A Jagged-1; signalling, p 99.6 1.3E-16 4.3E-21 126.0 5.2 62 250-318 105-167 (169)
16 2w86_A Fibrillin-1, fibrillin1 99.6 3.6E-17 1.2E-21 126.3 1.9 137 141-323 3-146 (147)
17 2ygq_A WIF-1, WNT inhibitory f 99.6 3.1E-16 1E-20 136.3 7.2 156 66-320 152-308 (324)
18 2ygq_A WIF-1, WNT inhibitory f 99.6 8.8E-16 3E-20 133.4 7.0 154 25-277 153-307 (324)
19 1lmj_A Fibrillin 1; EGF, calci 99.6 1.8E-15 6E-20 105.2 6.4 78 241-320 2-83 (86)
20 4fbr_A Lectin, myxobacterial h 99.6 1.1E-18 3.7E-23 144.4 -11.9 189 26-274 39-265 (267)
21 1emn_A Fibrillin; extracellula 99.6 4.7E-15 1.6E-19 102.0 6.9 76 239-318 2-78 (82)
22 2vj2_A Jagged-1; signalling, p 99.5 1.6E-15 5.5E-20 119.6 3.6 148 3-177 15-167 (169)
23 2w86_A Fibrillin-1, fibrillin1 99.5 6.8E-16 2.3E-20 119.1 -0.0 133 17-181 2-146 (147)
24 1dx5_I Thrombomodulin; serine 99.5 2.2E-15 7.5E-20 111.4 2.2 108 17-176 2-112 (118)
25 1x7a_L Coagulation factor IX, 99.5 1.4E-14 4.8E-19 111.0 5.0 86 237-328 43-129 (146)
26 1aut_L Activated protein C; se 99.5 3.3E-14 1.1E-18 104.4 5.5 85 239-326 3-95 (114)
27 3fcs_B Integrin beta-3; beta p 99.5 1.1E-13 3.6E-18 130.8 10.3 141 21-178 436-599 (690)
28 3fcs_B Integrin beta-3; beta p 99.4 3.1E-13 1E-17 127.6 10.7 169 66-317 439-625 (690)
29 1z6c_A Vitamin K-dependent pro 99.4 7.5E-14 2.6E-18 97.1 4.9 80 241-326 2-86 (87)
30 2w2n_E LDL receptor, low-densi 99.4 6.1E-14 2.1E-18 101.3 2.0 75 241-320 28-104 (107)
31 1lmj_A Fibrillin 1; EGF, calci 99.4 2.5E-13 8.5E-18 94.3 4.9 78 17-96 1-82 (86)
32 1nfu_B Coagulation factor XA, 99.4 8.5E-14 2.9E-18 110.9 2.1 85 237-326 37-122 (195)
33 2vh0_B Activated factor XA lig 99.4 1E-13 3.5E-18 104.7 2.1 84 238-327 38-123 (134)
34 2c4f_L Coagulation factor VII 99.4 7.2E-13 2.5E-17 101.1 6.0 86 238-328 43-132 (142)
35 1emn_A Fibrillin; extracellula 99.3 2.8E-12 9.5E-17 88.0 6.5 78 55-177 1-78 (82)
36 1aut_L Activated protein C; se 99.3 2.2E-12 7.5E-17 94.6 5.8 84 17-103 4-95 (114)
37 1tpg_A T-plasminogen activator 99.2 8.7E-12 3E-16 87.2 5.8 78 210-317 2-83 (91)
38 1x7a_L Coagulation factor IX, 99.2 7.6E-12 2.6E-16 95.7 5.3 82 17-104 46-128 (146)
39 1z6c_A Vitamin K-dependent pro 99.2 5.4E-12 1.8E-16 87.7 3.8 71 17-92 1-76 (87)
40 3h5c_B Vitamin K-dependent pro 99.2 1.9E-11 6.3E-16 106.7 7.0 83 241-328 4-87 (317)
41 2w2n_E LDL receptor, low-densi 99.1 1.1E-11 3.7E-16 89.4 1.5 82 9-95 18-102 (107)
42 1tpg_A T-plasminogen activator 99.1 4.5E-11 1.6E-15 83.5 4.7 76 6-94 3-83 (91)
43 1nfu_B Coagulation factor XA, 99.1 1.6E-11 5.6E-16 97.7 2.1 81 17-103 40-122 (195)
44 3p5b_L Low density lipoprotein 99.1 8.6E-11 2.9E-15 105.8 6.5 80 243-326 1-80 (400)
45 2gy5_A Angiopoietin-1 receptor 99.1 2.7E-10 9.3E-15 102.4 9.7 129 4-179 184-320 (423)
46 2gy5_A Angiopoietin-1 receptor 99.1 2.3E-10 7.9E-15 102.8 8.8 136 40-278 185-320 (423)
47 2vh0_B Activated factor XA lig 99.1 2.5E-11 8.6E-16 91.5 2.1 81 17-103 40-122 (134)
48 2c4f_L Coagulation factor VII 99.0 2E-10 6.9E-15 87.5 5.1 82 17-104 45-131 (142)
49 3k6s_B Integrin beta-2; cell r 99.0 1.8E-10 6.2E-15 108.6 5.0 134 6-158 447-607 (687)
50 3k6s_B Integrin beta-2; cell r 99.0 9.1E-10 3.1E-14 103.8 7.3 144 112-299 434-607 (687)
51 3v65_B Low-density lipoprotein 98.9 1.3E-10 4.3E-15 104.2 1.3 82 241-326 2-84 (386)
52 1n7d_A LDL receptor, low-densi 98.9 5.4E-09 1.9E-13 100.6 12.4 81 241-325 293-373 (699)
53 3m0c_C LDL receptor, low-densi 98.9 9.5E-10 3.3E-14 106.7 7.1 80 243-326 313-392 (791)
54 3h5c_B Vitamin K-dependent pro 98.9 2.4E-09 8.1E-14 93.3 7.0 83 17-104 3-86 (317)
55 4aqs_A Laminin subunit beta-1; 98.8 3.7E-09 1.3E-13 98.3 5.0 74 243-318 436-523 (525)
56 3p5b_L Low density lipoprotein 98.8 6.8E-09 2.3E-13 93.4 5.7 78 20-101 1-78 (400)
57 3v65_B Low-density lipoprotein 98.6 7E-09 2.4E-13 92.9 1.7 83 17-103 1-84 (386)
58 1edm_B Factor IX; epidermal gr 98.6 3.9E-08 1.3E-12 56.7 4.1 37 241-277 2-38 (39)
59 1edm_B Factor IX; epidermal gr 98.6 6.1E-08 2.1E-12 55.8 4.5 37 17-53 1-37 (39)
60 3u7u_G Neuregulin 1; signaling 98.6 5.7E-08 1.9E-12 60.0 4.0 40 238-277 4-48 (55)
61 3u7u_G Neuregulin 1; signaling 98.4 1.9E-07 6.6E-12 57.6 3.4 41 14-54 3-48 (55)
62 2k2s_B Micronemal protein 6; m 98.4 1.2E-07 4.3E-12 59.8 2.1 45 239-286 8-55 (61)
63 1egf_A Epidermal growth factor 98.2 1.2E-06 4E-11 54.0 4.4 37 241-277 2-43 (53)
64 1n7d_A LDL receptor, low-densi 98.2 1.3E-06 4.4E-11 84.1 6.9 81 18-102 293-373 (699)
65 1klo_A Laminin; glycoprotein; 98.2 3E-06 1E-10 65.7 7.7 57 264-326 76-150 (162)
66 3m0c_C LDL receptor, low-densi 98.2 6.3E-07 2.2E-11 87.0 4.6 70 31-104 324-393 (791)
67 2k2s_B Micronemal protein 6; m 98.2 3.6E-07 1.2E-11 57.7 1.5 39 278-318 7-48 (61)
68 1a3p_A Epidermal growth factor 98.2 1.8E-06 6.1E-11 51.2 3.8 34 244-277 2-40 (45)
69 1apq_A Complement protease C1R 98.2 1.6E-06 5.5E-11 53.5 3.7 42 280-324 2-51 (53)
70 1egf_A Epidermal growth factor 98.1 2.2E-06 7.5E-11 52.8 4.2 37 18-54 2-43 (53)
71 1hae_A Heregulin-alpha; growth 98.1 9.9E-07 3.4E-11 56.6 2.6 43 243-287 7-54 (63)
72 2kl7_A Fibulin-4; secreted, ca 98.1 1.2E-06 4.1E-11 57.5 3.0 37 280-316 1-38 (71)
73 2p28_B Integrin beta-2; hybrid 98.1 1.7E-06 5.7E-11 70.2 3.0 62 25-95 96-173 (217)
74 2jkh_L Factor X light chain; p 98.0 3E-06 1E-10 52.6 3.3 43 243-287 2-47 (55)
75 1klo_A Laminin; glycoprotein; 98.0 5.7E-06 1.9E-10 64.1 5.5 28 68-95 2-32 (162)
76 1k36_A Epiregulin; EGF-like fo 98.0 3.2E-06 1.1E-10 50.2 3.1 36 241-277 2-42 (46)
77 2jkh_L Factor X light chain; p 98.0 2.1E-06 7.3E-11 53.3 2.2 44 283-329 2-45 (55)
78 1kli_L Factor VIIA; extrinsic 98.0 3.4E-06 1.2E-10 54.9 2.5 46 280-328 3-49 (69)
79 4aqs_A Laminin subunit beta-1; 97.9 2.1E-05 7.1E-10 73.1 8.5 37 241-277 486-524 (525)
80 1kli_L Factor VIIA; extrinsic 97.9 7.5E-06 2.6E-10 53.2 3.7 48 240-287 3-52 (69)
81 2p28_B Integrin beta-2; hybrid 97.9 1.2E-05 4.1E-10 65.1 5.7 99 185-318 97-212 (217)
82 1k36_A Epiregulin; EGF-like fo 97.9 6.3E-06 2.2E-10 48.9 3.0 36 18-54 2-42 (46)
83 1a3p_A Epidermal growth factor 97.9 1.3E-05 4.4E-10 47.4 3.7 35 20-54 1-40 (45)
84 1n1i_A Merozoite surface prote 97.8 4.2E-05 1.4E-09 52.7 6.4 71 243-314 11-84 (105)
85 3ca7_A Protein spitz; argos, E 97.8 2.4E-06 8.3E-11 52.3 -0.2 39 263-317 3-45 (52)
86 2kl7_A Fibulin-4; secreted, ca 97.8 1.5E-05 5E-10 52.3 3.3 35 241-275 2-39 (71)
87 1ob1_C Major merozoite surface 97.8 2.2E-05 7.5E-10 53.9 4.0 69 245-314 7-83 (99)
88 1hae_A Heregulin-alpha; growth 97.7 9.2E-06 3.1E-10 52.0 1.5 42 19-62 6-52 (63)
89 1apq_A Complement protease C1R 97.7 3.1E-05 1E-09 47.6 3.8 33 241-275 3-45 (53)
90 1kig_L Factor XA; glycoprotein 97.6 1.9E-05 6.3E-10 48.1 1.5 38 288-328 4-41 (51)
91 1kig_L Factor XA; glycoprotein 97.6 3.8E-05 1.3E-09 46.7 2.7 32 254-285 10-42 (51)
92 3ca7_A Protein spitz; argos, E 97.6 7.4E-06 2.5E-10 50.1 -0.6 40 6-54 4-47 (52)
93 2wg3_C Hedgehog-interacting pr 97.5 1.3E-05 4.6E-10 72.9 0.5 62 243-319 393-454 (463)
94 1gl4_A Nidogen-1, entactin; im 97.5 3.9E-05 1.3E-09 63.9 2.0 45 240-285 3-49 (285)
95 2bz6_L Blood coagulation facto 97.4 0.00011 3.6E-09 45.1 3.2 33 254-286 11-45 (53)
96 1nql_B Epidermal growth factor 97.4 8.5E-05 2.9E-09 45.4 2.6 31 247-277 11-43 (53)
97 2wg3_C Hedgehog-interacting pr 97.4 2.2E-05 7.6E-10 71.5 -0.5 73 7-94 379-452 (463)
98 2bz6_L Blood coagulation facto 97.3 0.00011 3.8E-09 45.0 2.2 38 289-329 6-44 (53)
99 1g1s_A P-selectin; selectin, l 97.3 0.00011 3.8E-09 56.9 2.6 41 243-286 120-160 (162)
100 1gl4_A Nidogen-1, entactin; im 97.1 7.1E-05 2.4E-09 62.4 0.3 45 17-62 3-49 (285)
101 1nql_B Epidermal growth factor 97.1 0.00026 8.8E-09 43.3 2.5 30 289-318 11-42 (53)
102 1ob1_C Major merozoite surface 97.1 0.00027 9.2E-09 48.5 2.6 70 22-92 7-84 (99)
103 1n1i_A Merozoite surface prote 97.0 0.00096 3.3E-08 46.0 5.0 71 20-91 11-84 (105)
104 2wph_E Coagulation factor IXA 97.0 0.00036 1.2E-08 43.7 2.6 36 289-327 6-42 (59)
105 3zyj_B Netrin-G1; cell adhesio 96.8 0.00054 1.9E-08 60.7 2.8 72 250-324 299-402 (426)
106 2wph_E Coagulation factor IXA 96.8 0.0013 4.5E-08 41.1 3.8 42 254-302 11-54 (59)
107 3zyj_B Netrin-G1; cell adhesio 96.8 0.0011 3.6E-08 58.8 4.4 47 248-310 371-417 (426)
108 1szb_A Mannose binding lectin- 96.7 0.00043 1.5E-08 54.0 1.5 53 269-326 113-168 (170)
109 3ltf_D Protein spitz; receptor 96.6 0.001 3.5E-08 41.4 2.3 29 249-277 15-47 (58)
110 1g1s_A P-selectin; selectin, l 96.6 0.00068 2.3E-08 52.3 1.7 42 19-63 119-160 (162)
111 2fd6_A Urokinase-type plasmino 96.4 0.0047 1.6E-07 45.0 5.0 29 249-277 2-33 (122)
112 1q4g_A Prostaglandin G/H synth 96.2 0.003 1E-07 58.5 3.7 36 242-277 2-39 (553)
113 1q4g_A Prostaglandin G/H synth 95.9 0.0037 1.3E-07 57.9 3.2 36 19-54 2-39 (553)
114 3nt1_A Prostaglandin-endoperox 95.9 0.0051 1.7E-07 57.1 3.8 36 242-277 1-38 (587)
115 3ltf_D Protein spitz; receptor 95.9 0.0031 1.1E-07 39.2 1.6 28 291-318 15-46 (58)
116 1szb_A Mannose binding lectin- 95.7 0.0045 1.6E-07 48.0 2.4 39 11-51 113-159 (170)
117 3cfw_A L-selectin; EGF, cell a 95.5 0.0095 3.3E-07 45.8 3.4 40 244-286 121-160 (164)
118 3nt1_A Prostaglandin-endoperox 95.4 0.0086 2.9E-07 55.6 3.5 36 19-54 1-38 (587)
119 2fd6_A Urokinase-type plasmino 95.2 0.025 8.5E-07 41.1 4.6 55 26-93 2-59 (122)
120 1g1t_A E-selectin; EGF, adhesi 95.0 0.011 3.9E-07 45.0 2.5 35 243-277 120-154 (157)
121 1nzi_A Complement C1S componen 94.8 0.018 6.2E-07 44.0 3.3 52 269-325 106-158 (159)
122 3cfw_A L-selectin; EGF, cell a 94.7 0.021 7.1E-07 43.9 3.2 41 20-63 120-160 (164)
123 1b9w_A Protein (merozoite surf 94.4 0.082 2.8E-06 35.5 5.1 69 244-313 6-78 (95)
124 2i9a_A Urokinase-type plasmino 94.1 0.06 2.1E-06 40.3 4.6 29 249-277 14-45 (145)
125 1g1t_A E-selectin; EGF, adhesi 93.7 0.02 6.9E-07 43.6 1.3 36 19-54 119-154 (157)
126 1xdt_R Hbegf, heparin-binding 93.2 0.052 1.8E-06 35.6 2.5 34 243-277 38-76 (79)
127 1iox_A Betacellulin; EGF-like 93.2 0.07 2.4E-06 31.8 2.8 29 248-277 14-44 (50)
128 3f1s_B Vitamin K-dependent pro 92.5 0.077 2.6E-06 44.7 3.3 45 242-286 2-48 (283)
129 3e50_C Protransforming growth 92.4 0.11 3.6E-06 30.9 2.8 29 248-277 14-44 (50)
130 2rnl_A Amphiregulin; AR, color 92.2 0.22 7.4E-06 29.6 4.0 29 248-277 18-48 (50)
131 1nzi_A Complement C1S componen 92.0 0.19 6.3E-06 38.2 4.6 42 139-182 114-157 (159)
132 3asi_A Neurexin-1-alpha; beta- 91.5 0.15 5.2E-06 45.4 4.2 36 242-277 185-221 (410)
133 3v64_C Agrin; beta propeller, 91.1 0.091 3.1E-06 45.7 2.3 39 243-283 2-42 (349)
134 3e50_C Protransforming growth 90.8 0.24 8.2E-06 29.4 3.2 29 290-319 14-44 (50)
135 3asi_A Neurexin-1-alpha; beta- 90.8 0.19 6.5E-06 44.8 4.1 36 19-54 185-221 (410)
136 1iox_A Betacellulin; EGF-like 90.7 0.13 4.6E-06 30.5 2.0 29 25-54 14-44 (50)
137 2rnl_A Amphiregulin; AR, color 90.6 0.2 6.8E-06 29.8 2.7 35 19-54 9-48 (50)
138 2ygo_A WIF-1, WNT inhibitory f 90.6 0.14 4.9E-06 39.6 2.7 30 244-277 150-179 (188)
139 1xdt_R Hbegf, heparin-binding 90.5 0.11 3.8E-06 34.0 1.7 35 19-54 37-76 (79)
140 2ygo_A WIF-1, WNT inhibitory f 88.9 0.3 1E-05 37.8 3.3 29 23-54 151-179 (188)
141 3f1s_B Vitamin K-dependent pro 88.4 0.18 6.1E-06 42.4 1.9 45 18-62 1-47 (283)
142 1ijq_A LDL receptor, low-densi 87.8 0.35 1.2E-05 41.2 3.4 41 281-324 266-315 (316)
143 2i9a_A Urokinase-type plasmino 86.1 0.94 3.2E-05 33.8 4.5 29 26-54 14-45 (145)
144 4a0p_A LRP6, LRP-6, low-densit 85.6 0.4 1.4E-05 45.3 2.8 42 281-325 264-306 (628)
145 2p26_A Integrin beta-2; hybrid 85.0 0.73 2.5E-05 38.5 3.8 58 250-316 198-265 (280)
146 3sov_A LRP-6, low-density lipo 84.8 0.69 2.4E-05 39.5 3.7 43 282-327 267-311 (318)
147 3v64_C Agrin; beta propeller, 84.5 0.35 1.2E-05 42.0 1.7 39 143-183 2-40 (349)
148 3qcw_A Neurexin-1-alpha; synap 83.8 0.75 2.6E-05 47.2 4.0 36 242-277 1017-1053(1245)
149 3qcw_A Neurexin-1-alpha; synap 82.4 0.88 3E-05 46.7 3.9 36 242-277 619-655 (1245)
150 3s94_A LRP-6, low-density lipo 81.7 0.65 2.2E-05 43.8 2.5 41 281-324 577-617 (619)
151 1b9w_A Protein (merozoite surf 79.2 2.4 8.2E-05 28.4 3.8 70 21-91 6-79 (95)
152 2e26_A Reelin, reeler protein; 78.7 0.5 1.7E-05 44.6 0.6 49 265-323 520-568 (725)
153 2e26_A Reelin, reeler protein; 78.0 0.44 1.5E-05 45.0 -0.0 42 8-54 521-564 (725)
154 2p26_A Integrin beta-2; hybrid 74.3 1.1 3.9E-05 37.3 1.5 57 27-92 198-264 (280)
155 4aqt_A Laminin subunit gamma-1 72.8 4.7 0.00016 35.2 5.1 19 160-178 268-286 (375)
156 4aqt_A Laminin subunit gamma-1 72.2 2.7 9.3E-05 36.7 3.5 24 258-281 267-290 (375)
157 3fby_A COMP, cartilage oligome 70.0 2.9 9.9E-05 38.1 3.2 34 19-52 18-55 (551)
158 4a0p_A LRP6, LRP-6, low-densit 67.4 3.9 0.00013 38.6 3.7 41 241-281 264-306 (628)
159 3fby_A COMP, cartilage oligome 64.2 4.8 0.00016 36.7 3.4 36 282-317 18-55 (551)
160 3sov_A LRP-6, low-density lipo 62.5 6.8 0.00023 33.2 4.0 39 243-281 268-309 (318)
161 3s94_A LRP-6, low-density lipo 61.9 6.1 0.00021 37.1 3.9 41 282-325 272-314 (619)
162 3ssb_I IMPI alpha, inducible m 61.8 4.1 0.00014 21.4 1.5 22 264-285 6-27 (32)
163 1ijq_A LDL receptor, low-densi 60.5 7.4 0.00025 32.8 3.9 35 241-275 266-309 (316)
164 2y38_A Laminin subunit alpha-5 56.6 22 0.00076 31.2 6.2 17 264-280 287-303 (403)
165 2y38_A Laminin subunit alpha-5 48.8 17 0.00057 32.0 4.2 9 86-94 374-382 (403)
166 3fl7_A Ephrin receptor; ATP-bi 45.9 8.2 0.00028 35.5 1.9 61 250-317 252-322 (536)
167 3dem_A Complement factor MAsp- 42.3 17 0.00057 30.0 3.1 28 291-320 133-160 (278)
168 1ccv_A AMCI, chymotrypsin inhi 37.1 12 0.00041 22.4 1.0 21 264-284 35-55 (56)
169 3t5o_A Complement component C6 35.9 26 0.0009 34.5 3.8 37 241-277 496-532 (913)
170 1nt0_A MAsp2, mannose-binding 29.2 24 0.00082 29.2 2.0 25 296-320 135-159 (286)
171 3fl7_A Ephrin receptor; ATP-bi 27.7 27 0.00092 32.1 2.2 65 27-94 252-322 (536)
172 2ddu_A Reelin; beta-jelly-roll 27.5 9 0.00031 33.3 -1.0 25 24-52 195-219 (387)
173 2p3f_N Anti-coagulant protein 25.5 23 0.0008 22.9 1.0 23 264-286 48-71 (78)
174 3t5o_A Complement component C6 25.2 43 0.0015 33.0 3.2 37 18-54 496-532 (913)
175 2h9e_C Anti-coagulant protein 23.5 22 0.00074 23.4 0.5 23 264-286 49-71 (84)
176 1hx2_A BSTI; beta-sheet disulf 23.0 42 0.0014 20.2 1.8 19 264-282 37-57 (60)
177 1nt0_A MAsp2, mannose-binding 20.1 53 0.0018 27.1 2.4 23 254-276 135-157 (286)
178 1lr7_A Follistatin, FS1; hepar 20.1 1E+02 0.0034 19.4 3.2 26 20-45 2-28 (74)
No 1
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.84 E-value=4.8e-22 Score=160.13 Aligned_cols=154 Identities=27% Similarity=0.638 Sum_probs=120.5
Q ss_pred CCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCC--CCCCCCCCceeeCC-----CCeeeeCCCCCCCCC
Q psy2857 22 CQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKAL--DKPCGLRAICENTV-----PGFNCLCPKGYSGKP 94 (332)
Q Consensus 22 C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~--~~~C~~~~~C~~~~-----~~~~C~C~~g~~~~~ 94 (332)
....||. +++|+++.++|.|.|++||+|.....|+++++|... ..+|.+++.|+++. ++|.|.|.+||.|..
T Consensus 8 ~~~~pC~-ng~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~ 86 (186)
T 1z1y_A 8 TVDTICX-NGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE 86 (186)
T ss_dssp CTTCCCB-TEEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET
T ss_pred CCCCCCC-CCEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC
Confidence 3556897 679999999999999999999755678899999743 57899899999998 899999999998752
Q ss_pred CCccceeeccCCCCCCCCccccCCCcccCceecCCCCccCCCCeeecCCCCCCCCCCCCCCcee----cCCCceEeeCCC
Q psy2857 95 DAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDARGSVCVDVDECQLGDPCGPQAQCT----NTPGSFRCDCVE 170 (332)
Q Consensus 95 ~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~g~~c~~~~~C~~~~~C~~~~~C~----~~~~~~~C~C~~ 170 (332)
..|. +++|. ..+|.++++|+ ++.++|.|.|++
T Consensus 87 ------------------------------------------~~C~-~d~C~-~~~C~~~g~C~~~~~~~~g~~~C~C~~ 122 (186)
T 1z1y_A 87 ------------------------------------------DTCV-LDVCQ-YXNCGESGECIVEYLSEIQSAGCSCAI 122 (186)
T ss_dssp ------------------------------------------TEEE-EGGGT-TCCCCTTEEEEEEEETTEEEEEEEECT
T ss_pred ------------------------------------------CCCC-CCcCc-CCCCCCCCEEeeCCcCCCCCceEECCC
Confidence 1222 34665 45688889998 888899999999
Q ss_pred CCccCC-CCccccccCcccceeeccccCcccccccCCcccccceecccccceecccccEEecccCccccccccCccCCCC
Q psy2857 171 GYVGAP-PRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEFSRIFSKHLKLFVIEDAKRNLNRVDINECQSNP 249 (332)
Q Consensus 171 G~~g~~-~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~ 249 (332)
||.|.. ....|.+ +++++|. .+
T Consensus 123 Gy~g~~~~~~~C~~--------------------------------------------------------~~~~~C~-~~ 145 (186)
T 1z1y_A 123 GXVPNPEDEXXCTX--------------------------------------------------------TGETACQ-LX 145 (186)
T ss_dssp EEEEETTTTTEEEE--------------------------------------------------------EECCCCC-CC
T ss_pred CCcccCCCCCcceE--------------------------------------------------------cCCCccc-cc
Confidence 998742 1111110 1236777 48
Q ss_pred C-CCCCeeeecCCceeeecCCCcccCCCC
Q psy2857 250 C-GVNATCIDTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 250 C-~~~~~C~~~~~~~~C~C~~G~~g~~~~ 277 (332)
| .++++|++..++|+|.|++||+|+.+.
T Consensus 146 C~~~~~~C~n~~g~y~C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 146 CNTDNEVCXNVEGVYXCQCMEGFTFDXEX 174 (186)
T ss_dssp CCTTTEEEEEETTEEEEEECTTCEEETTT
T ss_pred ccccCcceecCCCCeeeECCCCCccCccc
Confidence 9 889999999999999999999998764
No 2
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.83 E-value=2.4e-21 Score=156.06 Aligned_cols=149 Identities=26% Similarity=0.675 Sum_probs=120.1
Q ss_pred CCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccceeeccCCCCCCCCccccCCCcccCceecCCCCccCCCCeeecCCCC
Q psy2857 66 DKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDARGSVCVDVDEC 145 (332)
Q Consensus 66 ~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~g~~c~~~~~C 145 (332)
.++|. +++|+++.++|+|.|.+||.+.. +..|.++++|
T Consensus 10 ~~pC~-ng~C~~~~g~~~C~C~~G~~g~~-----------------------------------------~~~C~~id~C 47 (186)
T 1z1y_A 10 DTICX-NGQLVQMSNHFXCMCNEGLVHLS-----------------------------------------ENTCEEXNEC 47 (186)
T ss_dssp TCCCB-TEEEEECSSCEEEEECTTEEEEE-----------------------------------------TTEEEECCCC
T ss_pred CCCCC-CCEeECCCCCeEeECCCCCccCC-----------------------------------------CCccCCCCcc
Confidence 46787 45999999999999999997641 3456667777
Q ss_pred CC---CCCCCCCCceecCC-----CceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCcccccceeccc
Q psy2857 146 QL---GDPCGPQAQCTNTP-----GSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEF 217 (332)
Q Consensus 146 ~~---~~~C~~~~~C~~~~-----~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~ 217 (332)
.. .++|.++++|+++. ++|.|.|++||.|...
T Consensus 48 ~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~---------------------------------------- 87 (186)
T 1z1y_A 48 XXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED---------------------------------------- 87 (186)
T ss_dssp SGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT----------------------------------------
T ss_pred cCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC----------------------------------------
Confidence 62 46788889999998 8999999999987421
Q ss_pred ccceecccccEEecccCccccccccCccCCCCCCCCCeee----ecCCceeeecCCCcccCC--CCccccc--ccccCCC
Q psy2857 218 SRIFSKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCI----DTQGSYSCVCKEHYTGDP--YQACSDI--DECKALD 289 (332)
Q Consensus 218 ~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~----~~~~~~~C~C~~G~~g~~--~~~C~~~--d~C~~~~ 289 (332)
.+ .+++|...+|.++++|+ +..++|+|.|++||+|.. ...|+++ ++|.
T Consensus 88 --------------------~C-~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~--- 143 (186)
T 1z1y_A 88 --------------------TC-VLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ--- 143 (186)
T ss_dssp --------------------EE-EEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC---
T ss_pred --------------------CC-CCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc---
Confidence 01 14678888899999999 888899999999999942 2458776 7896
Q ss_pred CCC-CCCCeeecCCCceeeeCCCCCCCCCCCC
Q psy2857 290 KPC-GLRAICENTVPGFNCLCPKGYSGKPDAK 320 (332)
Q Consensus 290 ~~C-~~~~~C~~~~g~~~C~C~~g~~g~~~~~ 320 (332)
.+| .++++|+++.++|+|.|++||+|+....
T Consensus 144 ~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 144 LXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp CCCCTTTEEEEEETTEEEEEECTTCEEETTTT
T ss_pred ccccccCcceecCCCCeeeECCCCCccCcccc
Confidence 389 8899999999999999999999997655
No 3
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.82 E-value=1.2e-19 Score=137.99 Aligned_cols=131 Identities=37% Similarity=0.834 Sum_probs=99.5
Q ss_pred CCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccceeeccCCCCCCCCccccCCCcccCceecCCCCccCC
Q psy2857 56 CSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDAR 135 (332)
Q Consensus 56 C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~ 135 (332)
|+++++|.....+|.++++|+++.++|.|.|.+||.|. .|+
T Consensus 2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~-----~C~---------------------------------- 42 (135)
T 2vj3_A 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP-----RCE---------------------------------- 42 (135)
T ss_dssp -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST-----TSC----------------------------------
T ss_pred CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCC-----ccc----------------------------------
Confidence 57899998656899999999999999999999999875 221
Q ss_pred CCeeecCCCCCCCCCCCCCCceecCCCceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCcccccceec
Q psy2857 136 GSVCVDVDECQLGDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIH 215 (332)
Q Consensus 136 g~~c~~~~~C~~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~ 215 (332)
.++++|. .++|.++++|++..++|.|.|++||.|..+
T Consensus 43 ----~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C-------------------------------------- 79 (135)
T 2vj3_A 43 ----IDVNECV-SNPCQNDATCLDQIGEFQCICMPGYEGVHC-------------------------------------- 79 (135)
T ss_dssp ----EECCTTT-TCCCCSSCEEEECSSCEEEECCTTEESSSS--------------------------------------
T ss_pred ----ccCccCC-CCCCCCCCEEeCCCCCceeeCCCCCcCCcc--------------------------------------
Confidence 1345665 467888899999999999999999987421
Q ss_pred ccccceecccccEEecccCccccccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCC
Q psy2857 216 EFSRIFSKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCG 293 (332)
Q Consensus 216 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~ 293 (332)
..++++|...+|.++++|++..++|+|.|++||+|..++ .+|++|...++.|.
T Consensus 80 -----------------------~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~--~~i~~C~~~~~~c~ 132 (135)
T 2vj3_A 80 -----------------------EVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ--VDLHHILDAQKMVW 132 (135)
T ss_dssp -----------------------CEECCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC--EECC----------
T ss_pred -----------------------eecCCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccC--ccCccccCCCccee
Confidence 124577888899999999999999999999999998665 58999987666554
No 4
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.80 E-value=3.3e-19 Score=135.63 Aligned_cols=115 Identities=42% Similarity=0.999 Sum_probs=98.5
Q ss_pred eecCCCCCC-CCCCCCCCceecCCCceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCcccccceeccc
Q psy2857 139 CVDVDECQL-GDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEF 217 (332)
Q Consensus 139 c~~~~~C~~-~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~ 217 (332)
+.++++|+. .++|.++++|+++.++|.|.|++||.|..+
T Consensus 2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C---------------------------------------- 41 (135)
T 2vj3_A 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRC---------------------------------------- 41 (135)
T ss_dssp -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTS----------------------------------------
T ss_pred CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcc----------------------------------------
Confidence 457889973 578999999999999999999999987421
Q ss_pred ccceecccccEEecccCccccccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCe
Q psy2857 218 SRIFSKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAI 297 (332)
Q Consensus 218 ~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~ 297 (332)
..++++|...+|.++++|++..++|+|.|++||+|..++ .++++|.. .+|.++++
T Consensus 42 ---------------------~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~--~~~~~C~~--~~C~~~g~ 96 (135)
T 2vj3_A 42 ---------------------EIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCE--VNTDECAS--SPCLHNGR 96 (135)
T ss_dssp ---------------------CEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSC--EECCTTTT--CCSTTTCE
T ss_pred ---------------------cccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcce--ecCCcccC--CCcCCCCE
Confidence 235678888899999999999999999999999998654 57899975 68999999
Q ss_pred eecCCCceeeeCCCCCCCCCC
Q psy2857 298 CENTVPGFNCLCPKGYSGKPD 318 (332)
Q Consensus 298 C~~~~g~~~C~C~~g~~g~~~ 318 (332)
|++..++|+|.|++||+|...
T Consensus 97 C~~~~g~~~C~C~~G~~G~~C 117 (135)
T 2vj3_A 97 CLDKINEFQCECPTGFTGHLC 117 (135)
T ss_dssp EEECSSCEEEECCTTEESSSS
T ss_pred eECCCCCeEEECCCCCcCCcc
Confidence 999999999999999998743
No 5
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.78 E-value=1.4e-22 Score=167.53 Aligned_cols=222 Identities=8% Similarity=0.018 Sum_probs=151.1
Q ss_pred eeeeCCCCeEeeCCCC---CccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccceeeccCCCC
Q psy2857 32 TCIDTQGSYSCVCKEH---YTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQVDVTSE 108 (332)
Q Consensus 32 ~C~~~~g~~~C~C~~G---~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~~~ 108 (332)
++.|.+|+|.+.+.+| |.|...+ +++..+. .+|.++++|++..++|.|.|+.||+|..+...+ ...+ ...
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~~~~--~n~~~~~---~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni-~ec~-~~~ 77 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGARDK--QNVVALD---IKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANN-YTVE-NQW 77 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCCCSS--CCEEEEE---EECSSTTSEEEEEEEETTSCCEEEEEEECSTTE-EEEE-EES
T ss_pred eEeecCCcccCCcCCCCceeeccccc--cccccCC---CCcCCCCeecCCCCCeEEeCCCCcccccccccc-cccc-ccc
Confidence 4677889999999888 4443332 2333332 478899999999999999999999998543210 0000 012
Q ss_pred CCCCccccCCCcccCceecCCCCccCCCCeeecCCCCCCCCCCCCCCceecCCCceEeeCCCCCccCCCCcc---cccc-
Q psy2857 109 CSSNFECVNNAECVDGLCYCRPGFDARGSVCVDVDECQLGDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIK---CKDV- 184 (332)
Q Consensus 109 c~~~~~C~~~~~c~~~~c~C~~g~~~~g~~c~~~~~C~~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~---c~~~- 184 (332)
+-...+|.+.++++ . |..|...++|+ +.+|.++++|++...+|+|.|+.||+|..+... |...
T Consensus 78 ~c~s~pC~nggtc~----------~--G~~c~~~~eC~-s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~ 144 (267)
T 4fbr_A 78 GGTSAPWQPGGVWV----------L--GARDKQNIVAV-SIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQW 144 (267)
T ss_dssp SSTTSCEEEEEEEE----------C--CCCSSCCEEEE-EEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEEC
T ss_pred CcCCCcccCCCeee----------c--cCccccccccC-CCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccC
Confidence 22334666665542 2 66676667886 688999999999999999999999999766542 2222
Q ss_pred -----CcccceeeccccCcccccccCCcccccceecccccceecccccEEecccCccccccccCccCCCCCCCCCeeeec
Q psy2857 185 -----RWEFNVTLLFYETDYLHSVASDISDILTIIHEFSRIFSKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCIDT 259 (332)
Q Consensus 185 -----~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~ 259 (332)
+|.+..++. .+..+ ...+ .|.+.+|.++++|++.
T Consensus 145 ~c~s~pC~ngg~c~-----------------------------------~G~~c-----~~~i-~c~~~~c~ngg~C~dg 183 (267)
T 4fbr_A 145 GGSAAPWHSGGVWV-----------------------------------LGTRG-----KQNV-INVDAKSNDGGKTLSG 183 (267)
T ss_dssp SSTTSCCEEEEEEE-----------------------------------CCSST-----TSCE-EEEEEECSSTTSEEEE
T ss_pred CcCCccccCCccee-----------------------------------ccccc-----cccc-ccCCCCCCCCCEeeCC
Confidence 232222222 11111 1222 3556789999999999
Q ss_pred CCceeeecCCCcccCCCCcccccccccC---------------------C------CCCCCCCCeeecCCCceeeeCCCC
Q psy2857 260 QGSYSCVCKEHYTGDPYQACSDIDECKA---------------------L------DKPCGLRAICENTVPGFNCLCPKG 312 (332)
Q Consensus 260 ~~~~~C~C~~G~~g~~~~~C~~~d~C~~---------------------~------~~~C~~~~~C~~~~g~~~C~C~~g 312 (332)
..+|+|.|++||+|..++ .++++|.. . ..+|.++++|++...+|.|.||+|
T Consensus 184 ~~~y~C~Cp~Gf~G~~c~--~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~dg~~sy~CeCp~G 261 (267)
T 4fbr_A 184 TMTYNGEGPIGFRGTLTS--PDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGKTLAGTMIYNGEGPIG 261 (267)
T ss_dssp EEEETTSCCEEEEEEEEE--TTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEEEEEEEETTSCCEE
T ss_pred CCCeEEeCCCCccccccc--cccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCEeeCCCcceeecCCCC
Confidence 999999999999997554 34555211 0 116778889999989999999999
Q ss_pred CCCC
Q psy2857 313 YSGK 316 (332)
Q Consensus 313 ~~g~ 316 (332)
|+|.
T Consensus 262 F~G~ 265 (267)
T 4fbr_A 262 FRAR 265 (267)
T ss_dssp EEEE
T ss_pred cccc
Confidence 9874
No 6
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.77 E-value=7e-19 Score=135.33 Aligned_cols=125 Identities=29% Similarity=0.648 Sum_probs=100.6
Q ss_pred CCCCCCCCceecCCCceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCcccccceecccccceeccccc
Q psy2857 148 GDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEFSRIFSKHLKL 227 (332)
Q Consensus 148 ~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~~g 227 (332)
.++|.++++|++. |.|.|++||.|......
T Consensus 6 ~~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~----------------------------------------------- 35 (143)
T 2bou_A 6 ARWCPQDSSCVNA---TACRCNPGFSSFSEIIT----------------------------------------------- 35 (143)
T ss_dssp CTTCCTTEEESSS---SCEEECTTEECSSSSBC-----------------------------------------------
T ss_pred cCcCCCCCEEcCC---CEEeCCCCCcCcccccc-----------------------------------------------
Confidence 3678888999875 79999999998520000
Q ss_pred EEecccCccccccccCccCCC---CCCCCCeeeecCCceeeecCCCcccCCC---------CcccccccccCCCCCCCCC
Q psy2857 228 FVIEDAKRNLNRVDINECQSN---PCGVNATCIDTQGSYSCVCKEHYTGDPY---------QACSDIDECKALDKPCGLR 295 (332)
Q Consensus 228 ~~~~~~~~~~~~~~~~~C~~~---~C~~~~~C~~~~~~~~C~C~~G~~g~~~---------~~C~~~d~C~~~~~~C~~~ 295 (332)
.....+.++++|... +|.++++|+++.++|+|.|++||+|... ..|+|||+|....++|.++
T Consensus 36 ------~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~ 109 (143)
T 2bou_A 36 ------TPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSS 109 (143)
T ss_dssp ------STTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTT
T ss_pred ------CCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCC
Confidence 001235678899864 8998999999999999999999999854 2689999998767899999
Q ss_pred CeeecCCCceeeeCCCCCCCCCCCCccccccccC
Q psy2857 296 AICENTVPGFNCLCPKGYSGKPDAKVACEQEKAG 329 (332)
Q Consensus 296 ~~C~~~~g~~~C~C~~g~~g~~~~~~~c~~~~~~ 329 (332)
++|+++.++|+|.|++||+|....+ .|.++...
T Consensus 110 ~~C~n~~g~y~C~C~~Gy~g~~~~~-~C~~~~~C 142 (143)
T 2bou_A 110 TVCFNTVGSYSCRCRPGWKPRHGIP-NNQKDTVC 142 (143)
T ss_dssp SEEEECSSCEEEECCSSSCBCTTCC-SSBTTCCB
T ss_pred CEEECCCCCEEeeCCCCcccCCCCc-cCccCCcc
Confidence 9999999999999999999998765 78776654
No 7
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.75 E-value=6.9e-18 Score=129.93 Aligned_cols=123 Identities=29% Similarity=0.690 Sum_probs=94.7
Q ss_pred CCCCCCCCCCCCceecCC--CceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCcccccceecccccce
Q psy2857 144 ECQLGDPCGPQAQCTNTP--GSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEFSRIF 221 (332)
Q Consensus 144 ~C~~~~~C~~~~~C~~~~--~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~~ 221 (332)
+|. +++|.++++|++.. ++|.|.|++||.|..+...- .+
T Consensus 2 ~C~-~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~---~~----------------------------------- 42 (143)
T 4d90_A 2 ICD-PNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVV---EV----------------------------------- 42 (143)
T ss_dssp -CC-SCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCC---CC-----------------------------------
T ss_pred cCC-CCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCc---cc-----------------------------------
Confidence 564 67899999999876 68999999999986543210 00
Q ss_pred ecccccEEecccCccccccccCccCCCCCCCCCeee-------ecCCceeeecCCCcccCCCCcccccccccCCCCCCCC
Q psy2857 222 SKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCI-------DTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGL 294 (332)
Q Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~-------~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~ 294 (332)
......+.++++|...+|.++++|+ +..++|+|+|++||+|..++ .++|+|.. .+|.+
T Consensus 43 -----------~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~--~~i~~C~~--~~C~~ 107 (143)
T 4d90_A 43 -----------ASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ--HNINECEV--EPCKN 107 (143)
T ss_dssp -----------TTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSC--EECCTTTT--CCSCT
T ss_pred -----------cccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcc--cCCCcCCC--CCCCC
Confidence 0001234567889889999999999 67789999999999988544 48999985 68999
Q ss_pred CCeeecCCCceeeeCCCCCCCCCCCC
Q psy2857 295 RAICENTVPGFNCLCPKGYSGKPDAK 320 (332)
Q Consensus 295 ~~~C~~~~g~~~C~C~~g~~g~~~~~ 320 (332)
+++|+++.++|+|.|++||+|.....
T Consensus 108 ~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 108 GGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp TCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred CCEeECCCCCeEeECCCCCccCCcee
Confidence 99999999999999999999996644
No 8
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.72 E-value=1.1e-18 Score=137.04 Aligned_cols=148 Identities=30% Similarity=0.656 Sum_probs=102.7
Q ss_pred CCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccceeeccCCCCCCCCccccCCCcccCceecCCCCccCCC
Q psy2857 57 SDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDARG 136 (332)
Q Consensus 57 ~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~g 136 (332)
+++|+|.. +.+|. +++|+++.++|+|.|++||.+....+ .|+
T Consensus 1 ~dideC~~-~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~-~C~----------------------------------- 42 (162)
T 1uzk_A 1 TDVNECLD-PTTCI-SGNCVNTPGSYICDCPPDFELNPTRV-GCV----------------------------------- 42 (162)
T ss_dssp CCCCGGGS-TTSSB-TSEEEEETTEEEEECCTTCEECTTSS-BEE-----------------------------------
T ss_pred CccccCCC-CCCCC-CCEeECCCCCEEEeCCCCCeECCCCC-ccc-----------------------------------
Confidence 36889974 57896 78999999999999999998653222 333
Q ss_pred CeeecCCC--CC-CCCCC--CCCCceecCCC----ceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCc
Q psy2857 137 SVCVDVDE--CQ-LGDPC--GPQAQCTNTPG----SFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDI 207 (332)
Q Consensus 137 ~~c~~~~~--C~-~~~~C--~~~~~C~~~~~----~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~ 207 (332)
++++ |. ...+| ...++|+++.+ .|.|.|++||....
T Consensus 43 ----d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~------------------------------- 87 (162)
T 1uzk_A 43 ----DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGT------------------------------- 87 (162)
T ss_dssp ----CCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETT-------------------------------
T ss_pred ----CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCC-------------------------------
Confidence 2222 32 01122 23567887766 78899999887310
Q ss_pred ccccceecccccceecccccEEecccCccccccccCccCCCCCCCCCeee-ecCCceeeecCC--CcccCCC-Ccccccc
Q psy2857 208 SDILTIIHEFSRIFSKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCI-DTQGSYSCVCKE--HYTGDPY-QACSDID 283 (332)
Q Consensus 208 ~~~~c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~-~~~~~~~C~C~~--G~~g~~~-~~C~~~d 283 (332)
.|. .|. +..++|+|.|++ ||++... ..|+|||
T Consensus 88 ------------------------------------~C~--------~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~did 123 (162)
T 1uzk_A 88 ------------------------------------PCE--------MCPAVNTSEYKILCPGGEGFRPNPITVILEDID 123 (162)
T ss_dssp ------------------------------------TTE--------ECCCTTSHHHHHHCTTCTTEEECTTTCCEEECC
T ss_pred ------------------------------------Ccc--------cCCCCCCCCceeECCCCCCcccCCCCCccCccc
Confidence 011 121 245679999998 9999754 3579999
Q ss_pred cccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCCCCccc
Q psy2857 284 ECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVAC 323 (332)
Q Consensus 284 ~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~c 323 (332)
+|...+++|.+ ++|+|+.++|+|.|++||+|+...+ +|
T Consensus 124 eC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~d~~-~C 161 (162)
T 1uzk_A 124 ECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNEDTR-VC 161 (162)
T ss_dssp HHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCTTTC-BB
T ss_pred cccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCCCCC-cc
Confidence 99876678985 6999999999999999999998765 45
No 9
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.68 E-value=3.9e-18 Score=134.01 Aligned_cols=145 Identities=32% Similarity=0.696 Sum_probs=104.6
Q ss_pred ccCCcCCC-CCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCCCCccc--ccCCCCCCC--CCCceeeCCC----CeeeeC
Q psy2857 17 VDINECQS-NPCGVNATCIDTQGSYSCVCKEHYTGDPY-QACSDIDE--CKALDKPCG--LRAICENTVP----GFNCLC 86 (332)
Q Consensus 17 ~~~~~C~~-~~C~~~g~C~~~~g~~~C~C~~G~~g~~~-~~C~~~~~--c~~~~~~C~--~~~~C~~~~~----~~~C~C 86 (332)
+|||+|.. .+|. +++|+++.++|+|.|++||++.+. ..|+++++ |...+.+|. .++.|+++.+ +|.|.|
T Consensus 1 ~dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C 79 (162)
T 1uzk_A 1 TDVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC 79 (162)
T ss_dssp CCCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred CccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence 47999984 7896 799999999999999999996532 56777776 765444443 4789998877 799999
Q ss_pred CCCCC-CCCCCccceeeccCCCCCCCCccccCCCcccCceecCCC--CccCC--CCeeecCCCCCC-CCCCCCCCceecC
Q psy2857 87 PKGYS-GKPDAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRP--GFDAR--GSVCVDVDECQL-GDPCGPQAQCTNT 160 (332)
Q Consensus 87 ~~g~~-~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~--g~~~~--g~~c~~~~~C~~-~~~C~~~~~C~~~ 160 (332)
..||. +. .|+ .|.... -..++|.|++ ||.+. +..|.++++|.. +++|.+ ++|+++
T Consensus 80 ~~G~~~~~-----~C~------------~C~~~~-~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~ 140 (162)
T 1uzk_A 80 SLGKAWGT-----PCE------------MCPAVN-TSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINT 140 (162)
T ss_dssp TTCCEETT-----TTE------------ECCCTT-SHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEEC
T ss_pred CCCCCcCC-----Ccc------------cCCCCC-CCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcC
Confidence 99997 33 232 121111 1246788887 89854 357889999973 457875 699999
Q ss_pred CCceEeeCCCCCccCCCCccc
Q psy2857 161 PGSFRCDCVEGYVGAPPRIKC 181 (332)
Q Consensus 161 ~~~~~C~C~~G~~g~~~~~~c 181 (332)
.++|.|.|++||.+....+.|
T Consensus 141 ~gsy~C~C~~Gy~g~~d~~~C 161 (162)
T 1uzk_A 141 FGSFQCRCPTGYYLNEDTRVC 161 (162)
T ss_dssp SSCEEEECCTTCCBCTTTCBB
T ss_pred CCCEEeeCCCCccCCCCCCcc
Confidence 999999999999998766655
No 10
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.67 E-value=1.5e-16 Score=147.85 Aligned_cols=115 Identities=34% Similarity=0.814 Sum_probs=97.8
Q ss_pred cCCCCCCCCCCCCCCceecCCC-ceEe-eCCCCCccCCCCccccccCcccceeeccccCcccccccCCcccccceecccc
Q psy2857 141 DVDECQLGDPCGPQAQCTNTPG-SFRC-DCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEFS 218 (332)
Q Consensus 141 ~~~~C~~~~~C~~~~~C~~~~~-~~~C-~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~ 218 (332)
++++|. .++|.++++|+++.+ +|.| .|++||.|..
T Consensus 2 DIDeC~-~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg------------------------------------------ 38 (634)
T 1yo8_A 2 DPDGCL-SNPCFPGAQCSSFPDGSWSCGFCPVGFLGNG------------------------------------------ 38 (634)
T ss_dssp --CGGG-GCCSCTTCCEEECTTSCEEECCCCTTBCSCS------------------------------------------
T ss_pred cccccC-CCCCCCCCEEecCCCCCeECCcCCCccCCCC------------------------------------------
Confidence 567886 689999999999885 5999 9999998641
Q ss_pred cceecccccEEecccCccccccccCccCCCC--CCCCC---eeeecCCceeee-cCCCcccCCCC------------ccc
Q psy2857 219 RIFSKHLKLFVIEDAKRNLNRVDINECQSNP--CGVNA---TCIDTQGSYSCV-CKEHYTGDPYQ------------ACS 280 (332)
Q Consensus 219 ~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~--C~~~~---~C~~~~~~~~C~-C~~G~~g~~~~------------~C~ 280 (332)
..|.++++|...+ |.+++ +|+++.++|+|. |++||+|..+. .|+
T Consensus 39 ------------------~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~ 100 (634)
T 1yo8_A 39 ------------------THCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCE 100 (634)
T ss_dssp ------------------SSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEE
T ss_pred ------------------CCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCccc
Confidence 1244678898777 99888 999999999998 99999998753 489
Q ss_pred ccccccCCCCCCCCCCeeecCC----CceeeeCCCCCCCC
Q psy2857 281 DIDECKALDKPCGLRAICENTV----PGFNCLCPKGYSGK 316 (332)
Q Consensus 281 ~~d~C~~~~~~C~~~~~C~~~~----g~~~C~C~~g~~g~ 316 (332)
++++|....++|.++++|+++. ++|+|.|++||+|+
T Consensus 101 dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~Gd 140 (634)
T 1yo8_A 101 PENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGD 140 (634)
T ss_dssp ECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEES
T ss_pred ccccccCCCcccccCccccccccccccceeeeccCCcccc
Confidence 9999998778999999999998 99999999999985
No 11
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.66 E-value=4.2e-16 Score=119.88 Aligned_cols=113 Identities=29% Similarity=0.838 Sum_probs=82.8
Q ss_pred CcCCCCCCCCCCeeeeCC--CCeEeeCCCCCccCCCCC----------CCCcccccCCCCCCCCCCcee-------eCCC
Q psy2857 20 NECQSNPCGVNATCIDTQ--GSYSCVCKEHYTGDPYQA----------CSDIDECKALDKPCGLRAICE-------NTVP 80 (332)
Q Consensus 20 ~~C~~~~C~~~g~C~~~~--g~~~C~C~~G~~g~~~~~----------C~~~~~c~~~~~~C~~~~~C~-------~~~~ 80 (332)
|+|.++||.++++|++.. ++|.|.|++||+|..++. |.++++|. +.+|.+++.|+ ++.+
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~--~~~C~~~g~C~~~~~~~~~~~~ 78 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCT--PNPCHNGGTCEISEAYRGDTFI 78 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTS--SCCCCTTCEEEECCCEETTEEC
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCC--CCCCCCCCEecCCCccccCCCC
Confidence 578899999999999875 689999999999976642 22455664 35677777777 4445
Q ss_pred CeeeeCCCCCCCCCCCccceeeccCCCCCCCCccccCCCcccCceecCCCCccCCCCeee-cCCCCCCCCCCCCCCceec
Q psy2857 81 GFNCLCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDARGSVCV-DVDECQLGDPCGPQAQCTN 159 (332)
Q Consensus 81 ~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~g~~c~-~~~~C~~~~~C~~~~~C~~ 159 (332)
+|.|.|.+||.| ..|. ++++|. .++|.++++|++
T Consensus 79 ~~~C~C~~G~~G--------------------------------------------~~C~~~i~~C~-~~~C~~~~~C~~ 113 (143)
T 4d90_A 79 GYVCKCPRGFNG--------------------------------------------IHCQHNINECE-VEPCKNGGICTD 113 (143)
T ss_dssp CEEEECCTTEES--------------------------------------------TTSCEECCTTT-TCCSCTTCEEEE
T ss_pred CeEeECcCCCcC--------------------------------------------CCcccCCCcCC-CCCCCCCCEeEC
Confidence 666666666654 3443 567786 678999999999
Q ss_pred CCCceEeeCCCCCccCCCCc
Q psy2857 160 TPGSFRCDCVEGYVGAPPRI 179 (332)
Q Consensus 160 ~~~~~~C~C~~G~~g~~~~~ 179 (332)
+.++|.|.|++||.|..+..
T Consensus 114 ~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 114 LVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp ETTEEEEECCTTCBSTTSCB
T ss_pred CCCCeEeECCCCCccCCcee
Confidence 99999999999999986543
No 12
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.64 E-value=5.4e-16 Score=144.21 Aligned_cols=156 Identities=33% Similarity=0.735 Sum_probs=112.5
Q ss_pred CcccccCCCCCCCCCCceeeCCCC-eee-eCCCCCCCCCCCccceeeccCCCCCCCCccccCCCcccCceecCCCCccCC
Q psy2857 58 DIDECKALDKPCGLRAICENTVPG-FNC-LCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDAR 135 (332)
Q Consensus 58 ~~~~c~~~~~~C~~~~~C~~~~~~-~~C-~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~ 135 (332)
++++|. .++|.+++.|+++.++ |+| .|++||.|.
T Consensus 2 DIDeC~--~nPC~~gg~C~n~~~Gsy~C~~C~~GytGd------------------------------------------ 37 (634)
T 1yo8_A 2 DPDGCL--SNPCFPGAQCSSFPDGSWSCGFCPVGFLGN------------------------------------------ 37 (634)
T ss_dssp --CGGG--GCCSCTTCCEEECTTSCEEECCCCTTBCSC------------------------------------------
T ss_pred cccccC--CCCCCCCCEEecCCCCCeECCcCCCccCCC------------------------------------------
Confidence 578886 4789999999998854 999 899998763
Q ss_pred CCeeecCCCCCC-CCCCCCCC---ceecCCCceEee-CCCCCccCCCCccccccCcccceeeccccCcccccccCCcccc
Q psy2857 136 GSVCVDVDECQL-GDPCGPQA---QCTNTPGSFRCD-CVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDI 210 (332)
Q Consensus 136 g~~c~~~~~C~~-~~~C~~~~---~C~~~~~~~~C~-C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~ 210 (332)
+..|.++++|.. +..|.+++ +|+++.++|.|. |++||.|..+... .+.
T Consensus 38 g~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~--g~~------------------------- 90 (634)
T 1yo8_A 38 GTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGV--GLE------------------------- 90 (634)
T ss_dssp SSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEES--SSH-------------------------
T ss_pred CCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccc--ccc-------------------------
Confidence 345566778862 23498888 999999999998 9999998643210 000
Q ss_pred cceecccccceecccccEEecccCccccccccCccCC--CCCCCCCeeeecC----CceeeecCCCcccCCCCccc---c
Q psy2857 211 LTIIHEFSRIFSKHLKLFVIEDAKRNLNRVDINECQS--NPCGVNATCIDTQ----GSYSCVCKEHYTGDPYQACS---D 281 (332)
Q Consensus 211 ~c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~--~~C~~~~~C~~~~----~~~~C~C~~G~~g~~~~~C~---~ 281 (332)
. .......|.++++|.. .+|.++++|++.. ++|+|.|++||+|... .|+ +
T Consensus 91 ----------------~----~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~-~Ce~d~D 149 (634)
T 1yo8_A 91 ----------------A----AKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGL-ICGEDSD 149 (634)
T ss_dssp ----------------H----HHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSS-SEEECTT
T ss_pred ----------------c----cccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCc-ccccccC
Confidence 0 0001234667899975 5899999999998 9999999999998543 464 8
Q ss_pred cccccCCCCCCCCCCeeecCCCceeee---CCCC
Q psy2857 282 IDECKALDKPCGLRAICENTVPGFNCL---CPKG 312 (332)
Q Consensus 282 ~d~C~~~~~~C~~~~~C~~~~g~~~C~---C~~g 312 (332)
+++|....+.|..+ ++|.|. |+.+
T Consensus 150 iDeC~~~~~~C~~~-------~~y~C~~dnC~~~ 176 (634)
T 1yo8_A 150 LDGWPNLNLVCATN-------ATYHCIKDNCPHL 176 (634)
T ss_dssp SSSSCSSCCTTTTT-------CSSSCSCCSSTTS
T ss_pred cccccCCCCcccCC-------CCccccccccccc
Confidence 99998777777632 456665 6654
No 13
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.64 E-value=2.9e-16 Score=120.65 Aligned_cols=124 Identities=30% Similarity=0.690 Sum_probs=98.5
Q ss_pred CCCCCCCeeeeCCCCeEeeCCCCCccCC------CCCCCCcccccCCC-CCCCCCCceeeCCCCeeeeCCCCCCCCCCCc
Q psy2857 25 NPCGVNATCIDTQGSYSCVCKEHYTGDP------YQACSDIDECKALD-KPCGLRAICENTVPGFNCLCPKGYSGKPDAK 97 (332)
Q Consensus 25 ~~C~~~g~C~~~~g~~~C~C~~G~~g~~------~~~C~~~~~c~~~~-~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~ 97 (332)
.+|..+++|+++ |.|+|++||+|.. ...|+++++|.... .+|..++.|+++.++|.|.|.+||.+.....
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~ 83 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAK 83 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCS
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcc
Confidence 579999999985 7999999999852 35788999998632 3799899999999999999999999874322
Q ss_pred cceeeccCCCCCCCCccccCCCcccCceecCCCCccCCCCeeecCCCCCC-CCCCCCCCceecCCCceEeeCCCCCccCC
Q psy2857 98 VACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDARGSVCVDVDECQL-GDPCGPQAQCTNTPGSFRCDCVEGYVGAP 176 (332)
Q Consensus 98 ~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~g~~c~~~~~C~~-~~~C~~~~~C~~~~~~~~C~C~~G~~g~~ 176 (332)
. +.+ ..+..|.++++|.. .++|.++++|+++.++|.|.|++||.+..
T Consensus 84 ~----------------~~~----------------~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~ 131 (143)
T 2bou_A 84 T----------------FKN----------------ESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRH 131 (143)
T ss_dssp C----------------BSS----------------GGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCT
T ss_pred c----------------ccc----------------CCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCC
Confidence 0 000 11567888899973 47899999999999999999999999988
Q ss_pred CCccccc
Q psy2857 177 PRIKCKD 183 (332)
Q Consensus 177 ~~~~c~~ 183 (332)
....|.+
T Consensus 132 ~~~~C~~ 138 (143)
T 2bou_A 132 GIPNNQK 138 (143)
T ss_dssp TCCSSBT
T ss_pred CCccCcc
Confidence 7776654
No 14
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.64 E-value=6.8e-17 Score=119.49 Aligned_cols=110 Identities=31% Similarity=0.620 Sum_probs=85.0
Q ss_pred cCCCCCCCCCCCCCCceecC-CCceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCcccccceeccccc
Q psy2857 141 DVDECQLGDPCGPQAQCTNT-PGSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEFSR 219 (332)
Q Consensus 141 ~~~~C~~~~~C~~~~~C~~~-~~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~ 219 (332)
++++|. .++|.+ +|+++ .++|.|.|++||.+..... ..
T Consensus 3 dideC~-~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~----------~~---------------------------- 41 (118)
T 1dx5_I 3 PVDPCF-RANCEY--QCQPLDQTSYLCVCAEGFAPIPHEP----------HR---------------------------- 41 (118)
T ss_dssp CCCGGG-GCCCSS--EEEECSSSCEEEECCTTEEEETTEE----------EE----------------------------
T ss_pred ccccCC-CCCCCC--CCCCCCCCCEEeECCCCccccCCCC----------Cc----------------------------
Confidence 577886 678873 99999 8999999999999752100 00
Q ss_pred ceecccccEEecccCccccccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeee
Q psy2857 220 IFSKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICE 299 (332)
Q Consensus 220 ~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~ 299 (332)
+. ++|...+|. +.|++ .++|+|.|++||++.....|++||+|.. .++| +++|+
T Consensus 42 -------------------C~--~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g~~C~dideC~~-~~~C--~~~C~ 94 (118)
T 1dx5_I 42 -------------------CQ--MFCNQTACP--ADCDP-NTQASCECPEGYILDDGFICTDIDECEN-GGFC--SGVCH 94 (118)
T ss_dssp -------------------EE--ECCCSSEEE--CEECT-TSTTCEECCTTEEEETTTEEEECCHHHH-CSSC--SSEEE
T ss_pred -------------------cc--cccCCCCCC--CcccC-CCCeEeECCCCccCCCCCccccccccCC-CCCC--cCeEE
Confidence 00 124445554 67888 5889999999999664457899999986 3689 68999
Q ss_pred cCCCceeeeCCCCCCCCCC
Q psy2857 300 NTVPGFNCLCPKGYSGKPD 318 (332)
Q Consensus 300 ~~~g~~~C~C~~g~~g~~~ 318 (332)
++.++|+|.|++||+|...
T Consensus 95 n~~g~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 95 NLPGTFECICGPDSALAGQ 113 (118)
T ss_dssp ECSSSEEEEECSSSSCEEE
T ss_pred eCCCCEEEECCCCCccCCC
Confidence 9999999999999999865
No 15
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.64 E-value=1.3e-16 Score=125.96 Aligned_cols=62 Identities=31% Similarity=0.842 Sum_probs=50.7
Q ss_pred CCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecC-CCceeeeCCCCCCCCCC
Q psy2857 250 CGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENT-VPGFNCLCPKGYSGKPD 318 (332)
Q Consensus 250 C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~-~g~~~C~C~~g~~g~~~ 318 (332)
|. +++|+ ++|+|+|++||+|..++ .++++|.. ..+|.++++|+++ .++|+|.|++||+|...
T Consensus 105 C~-~g~C~---~~~~C~C~~G~~G~~C~--~~~~~C~~-~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~C 167 (169)
T 2vj2_A 105 CV-HGICN---EPWQCLCETNWGGQLCD--KDLNYCGT-HQPCLNGGTCSNTGPDKYQCSCPEGYSGPNC 167 (169)
T ss_dssp CS-SEECS---STTCCEECTTEETTTTC--EESCHHHH-TCCCCTTCEEEECSTTCEEEECCTTCCSTTS
T ss_pred CC-CCCcC---CCCEEeCCCCCCCCccc--CCCCCCCC-CCCCCCCCEEcCCCCCCcEeECCCCCcCcCc
Confidence 54 34776 56899999999998654 48899975 4689999999996 88999999999999753
No 16
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.64 E-value=3.6e-17 Score=126.32 Aligned_cols=137 Identities=28% Similarity=0.614 Sum_probs=90.2
Q ss_pred cCCCCCCCCCCCCCCceecCCCceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCcccccceecccccc
Q psy2857 141 DVDECQLGDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEFSRI 220 (332)
Q Consensus 141 ~~~~C~~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~ 220 (332)
++++|. .++|.+ ++|+++.++|.|.|++||.+......|.+.. ...|. .
T Consensus 3 dideC~-~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~---~~~C~----------------------~---- 51 (147)
T 2w86_A 3 DIDECE-SSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETI---KGTCW----------------------Q---- 51 (147)
T ss_dssp CCCGGG-GCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECC---CEEEE----------------------E----
T ss_pred cCccCc-CCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCC---CCccc----------------------C----
Confidence 678887 578975 7999999999999999999987666665431 11111 1
Q ss_pred eecccccEEecccCccccccccCccCC-------CCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCC
Q psy2857 221 FSKHLKLFVIEDAKRNLNRVDINECQS-------NPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCG 293 (332)
Q Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~~C~~-------~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~ 293 (332)
+|.+..+ ..++++|.. .....+..|.. -.|.|.|++||++.....|+|||+|...+++|.
T Consensus 52 ------~~~g~~C-----~~~~~~c~~~~~C~~~~g~~~g~~C~~--c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~ 118 (147)
T 2w86_A 52 ------TVIDGRC-----EININGATLKSQCCSSLGAAWGSPCTL--CQVDPICGKGYSRIKGTQCEDIDECEVFPGVCK 118 (147)
T ss_dssp ------EEETTEE-----EEEEEEEECHHHHHTTTCSEETTTTEE--CCCCTTTCTTEEEEETTEEEECCHHHHSTTCSS
T ss_pred ------CCCCCcc-----ccCCCccccCCccccCcCcccCCCccc--CCCcccCCCccccCCCCccCccccccCCCCCCC
Confidence 1211111 112222211 00001112221 237899999997533346889999998777898
Q ss_pred CCCeeecCCCceeeeCCCCCCCCCCCCccc
Q psy2857 294 LRAICENTVPGFNCLCPKGYSGKPDAKVAC 323 (332)
Q Consensus 294 ~~~~C~~~~g~~~C~C~~g~~g~~~~~~~c 323 (332)
+ ++|+|+.++|+|.|++||+|....+ .|
T Consensus 119 ~-g~C~n~~g~y~C~C~~Gy~g~~~~~-~C 146 (147)
T 2w86_A 119 N-GLCVNTRGSFKCQCPSGMTLDATGR-IC 146 (147)
T ss_dssp S-SEEEEETTEEEEECCTTCCBCTTSS-CB
T ss_pred C-CEEECCCCCEEeeCCCCCccCCCCC-ee
Confidence 5 5999999999999999999998765 44
No 17
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.63 E-value=3.1e-16 Score=136.29 Aligned_cols=156 Identities=31% Similarity=0.780 Sum_probs=65.0
Q ss_pred CCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccceeeccCCCCCCCCccccCCCcccC-ceecCCCCccCCCCeeecCCC
Q psy2857 66 DKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNAECVD-GLCYCRPGFDARGSVCVDVDE 144 (332)
Q Consensus 66 ~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~-~~c~C~~g~~~~g~~c~~~~~ 144 (332)
+.+|.+++.|++ .+.|.|.+||.|..+... .|.. .|.+++.|+. +.|.|.+||. |..|.. ..
T Consensus 152 ~~~C~~~G~C~~---~~~C~C~~G~~G~~C~~~---------~C~~--~C~~~G~C~~~~~C~C~~G~~--G~~C~~-~~ 214 (324)
T 2ygq_A 152 PGGCRNGGFCNE---RRICECPDGFHGPHCEKA---------LCTP--RCMNGGLCVTPGFCICPPGFY--GVNCDK-AN 214 (324)
T ss_dssp SSCCCSSCEECT---TSCEECCTTEESSSSCEE---------SSSS--CCCTTCEECSSCCEECCTTCB--TTTTCB-CC
T ss_pred CCCCCCCCEECC---CCeEECCCCCcCCCCCCC---------CCCC--CCCCCCEEcCCCEEeCCCCcc--CCCccc-Cc
Confidence 357888899975 368999999999744321 2332 5777777765 6899999998 677753 34
Q ss_pred CCCCCCCCCCCceecCCCceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCcccccceecccccceecc
Q psy2857 145 CQLGDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEFSRIFSKH 224 (332)
Q Consensus 145 C~~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~ 224 (332)
|. .+|.++++|++. +.|.|++||.|..++
T Consensus 215 C~--~~C~~~G~C~~~---~~C~C~~G~~G~~C~---------------------------------------------- 243 (324)
T 2ygq_A 215 CS--TTCFNGGTCFYP---GKCICPPGLEGEQCE---------------------------------------------- 243 (324)
T ss_dssp CS--SCCCSSCCBSCS---SCBCCCTTCCTTTTC----------------------------------------------
T ss_pred CC--CCCCCCCeeCCC---CeeeCCCCccCCCCC----------------------------------------------
Confidence 64 578888888763 589999999875332
Q ss_pred cccEEecccCccccccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCc
Q psy2857 225 LKLFVIEDAKRNLNRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPG 304 (332)
Q Consensus 225 ~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~ 304 (332)
+++|. .+|.++++|+. .++|.|++||+|..++ +++|. .+|.++++|++ .
T Consensus 244 -----------------~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~----~~~C~---~~C~~~g~C~~---~ 292 (324)
T 2ygq_A 244 -----------------ISKCP-QPCRNGGKCIG---KSKCKCSKGYQGDLCS----KPVCE---PGCGAHGTCHE---P 292 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------cCcCC-CcCCCCCEECC---CCEEECCCCCcCCCCc----CCCCC---CCCCCCCEECC---C
Confidence 12233 46778888874 4799999999998765 46675 47988899986 4
Q ss_pred eeeeCCCCCCCCCCCC
Q psy2857 305 FNCLCPKGYSGKPDAK 320 (332)
Q Consensus 305 ~~C~C~~g~~g~~~~~ 320 (332)
+.|.|++||+|..+..
T Consensus 293 ~~C~C~~G~~G~~C~~ 308 (324)
T 2ygq_A 293 NKCQCQEGWHGRHCNK 308 (324)
T ss_dssp ----------------
T ss_pred CEeECCCCCcCCCCCC
Confidence 6999999999986543
No 18
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.60 E-value=8.8e-16 Score=133.41 Aligned_cols=154 Identities=29% Similarity=0.778 Sum_probs=68.9
Q ss_pred CCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccceeecc
Q psy2857 25 NPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQVD 104 (332)
Q Consensus 25 ~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~ 104 (332)
.+|.++|.|.+ .+.|.|.+||+|..++ .+.|. .+|.+++.|++ .+.|.|.+||.|..+...
T Consensus 153 ~~C~~~G~C~~---~~~C~C~~G~~G~~C~----~~~C~---~~C~~~G~C~~---~~~C~C~~G~~G~~C~~~------ 213 (324)
T 2ygq_A 153 GGCRNGGFCNE---RRICECPDGFHGPHCE----KALCT---PRCMNGGLCVT---PGFCICPPGFYGVNCDKA------ 213 (324)
T ss_dssp SCCCSSCEECT---TSCEECCTTEESSSSC----EESSS---SCCCTTCEECS---SCCEECCTTCBTTTTCBC------
T ss_pred CCCCCCCEECC---CCeEECCCCCcCCCCC----CCCCC---CCCCCCCEEcC---CCEEeCCCCccCCCcccC------
Confidence 57999999986 4689999999997664 24553 47999999976 358999999999855432
Q ss_pred CCCCCCCCccccCCCcccC-ceecCCCCccCCCCeeecCCCCCCCCCCCCCCceecCCCceEeeCCCCCccCCCCccccc
Q psy2857 105 VTSECSSNFECVNNAECVD-GLCYCRPGFDARGSVCVDVDECQLGDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCKD 183 (332)
Q Consensus 105 ~~~~c~~~~~C~~~~~c~~-~~c~C~~g~~~~g~~c~~~~~C~~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~~ 183 (332)
.|. ..|.+++.|+. +.|.|.+||. |..|. +++|. .+|.++++|+. .+.|.|++||.|..+.
T Consensus 214 ---~C~--~~C~~~G~C~~~~~C~C~~G~~--G~~C~-~~~C~--~~C~~~g~C~~---~~~C~C~~G~~G~~C~----- 275 (324)
T 2ygq_A 214 ---NCS--TTCFNGGTCFYPGKCICPPGLE--GEQCE-ISKCP--QPCRNGGKCIG---KSKCKCSKGYQGDLCS----- 275 (324)
T ss_dssp ---CCS--SCCCSSCCBSCSSCBCCCTTCC--TTTTC-------------------------------------------
T ss_pred ---cCC--CCCCCCCeeCCCCeeeCCCCcc--CCCCC-cCcCC--CcCCCCCEECC---CCEEECCCCCcCCCCc-----
Confidence 232 26777777764 6899999998 77774 45664 67888899974 4799999999875322
Q ss_pred cCcccceeeccccCcccccccCCcccccceecccccceecccccEEecccCccccccccCccCCCCCCCCCeeeecCCce
Q psy2857 184 VRWEFNVTLLFYETDYLHSVASDISDILTIIHEFSRIFSKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCIDTQGSY 263 (332)
Q Consensus 184 ~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~~~ 263 (332)
+++|. .+|.++++|++ .+
T Consensus 276 ----------------------------------------------------------~~~C~-~~C~~~g~C~~---~~ 293 (324)
T 2ygq_A 276 ----------------------------------------------------------KPVCE-PGCGAHGTCHE---PN 293 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------CCCCC-CCCCCCCEECC---CC
Confidence 12233 45777888986 46
Q ss_pred eeecCCCcccCCCC
Q psy2857 264 SCVCKEHYTGDPYQ 277 (332)
Q Consensus 264 ~C~C~~G~~g~~~~ 277 (332)
+|.|++||+|..++
T Consensus 294 ~C~C~~G~~G~~C~ 307 (324)
T 2ygq_A 294 KCQCQEGWHGRHCN 307 (324)
T ss_dssp --------------
T ss_pred EeECCCCCcCCCCC
Confidence 99999999998765
No 19
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.59 E-value=1.8e-15 Score=105.24 Aligned_cols=78 Identities=37% Similarity=0.916 Sum_probs=66.4
Q ss_pred ccCccCCCC--CCCCCeeeecCCceeeecCCCcccCC--CCcccccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCC
Q psy2857 241 DINECQSNP--CGVNATCIDTQGSYSCVCKEHYTGDP--YQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGK 316 (332)
Q Consensus 241 ~~~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~~g~~--~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~ 316 (332)
++|+|...+ |. +++|+++.++|+|.|++||++.. ...|+|||+|...+..|. +++|+|+.++|+|.|++||++.
T Consensus 2 dideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 2 DIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp CCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred ccccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence 678998765 85 45999999999999999999652 356899999988666686 5799999999999999999998
Q ss_pred CCCC
Q psy2857 317 PDAK 320 (332)
Q Consensus 317 ~~~~ 320 (332)
...+
T Consensus 80 ~~~~ 83 (86)
T 1lmj_A 80 PNIS 83 (86)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 7765
No 20
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.59 E-value=1.1e-18 Score=144.39 Aligned_cols=189 Identities=7% Similarity=-0.048 Sum_probs=122.7
Q ss_pred CCCCCCeeeeCCCCeEeeCCCCCccCCCC---------------------------CCCCcccccCCCCCCCCCCceeeC
Q psy2857 26 PCGVNATCIDTQGSYSCVCKEHYTGDPYQ---------------------------ACSDIDECKALDKPCGLRAICENT 78 (332)
Q Consensus 26 ~C~~~g~C~~~~g~~~C~C~~G~~g~~~~---------------------------~C~~~~~c~~~~~~C~~~~~C~~~ 78 (332)
+|.++|+|++..++|.|.|++||+|..++ .|...++|.. .+|.++++|++.
T Consensus 39 ~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s--~pC~ngG~C~~~ 116 (267)
T 4fbr_A 39 KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVS--IKSNDGGKTLTG 116 (267)
T ss_dssp ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEE--EECSSTTSEEEE
T ss_pred CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCC--CCCCCCCEEecC
Confidence 68889999999999999999999986553 2333344543 578899999999
Q ss_pred CCCeeeeCCCCCCCCCCCccc--eeeccCCCCCCCCccccCCCcccCceecCCCCccCCCCeeecCCCCCCCCCCCCCCc
Q psy2857 79 VPGFNCLCPKGYSGKPDAKVA--CEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDARGSVCVDVDECQLGDPCGPQAQ 156 (332)
Q Consensus 79 ~~~~~C~C~~g~~~~~~~~~~--c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~g~~c~~~~~C~~~~~C~~~~~ 156 (332)
..+|+|.|+.||+|..+.... |+.. .+....+|.+.++++. |..|.....+. +.+|.++++
T Consensus 117 ~~sy~C~C~~Gf~G~~Ce~~~d~C~n~----~~c~s~pC~ngg~c~~------------G~~c~~~i~c~-~~~c~ngg~ 179 (267)
T 4fbr_A 117 TTTYNGEGPIGFKSEVTDGDTYSVENQ----WGGSAAPWHSGGVWVL------------GTRGKQNVINV-DAKSNDGGK 179 (267)
T ss_dssp EEEETTSCCEEEEEEECCCCEEEEEEE----CSSTTSCCEEEEEEEC------------CSSTTSCEEEE-EEECSSTTS
T ss_pred CccEEeeCCCCccccCCCCCccccccc----CCcCCccccCCcceec------------ccccccccccC-CCCCCCCCE
Confidence 999999999999998543211 1111 1222234544443321 34443222333 467899999
Q ss_pred eecCCCceEeeCCCCCccCCCCc---cc------cccCcccceeeccccCcccccccCCcccccceecccccceeccccc
Q psy2857 157 CTNTPGSFRCDCVEGYVGAPPRI---KC------KDVRWEFNVTLLFYETDYLHSVASDISDILTIIHEFSRIFSKHLKL 227 (332)
Q Consensus 157 C~~~~~~~~C~C~~G~~g~~~~~---~c------~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~~g 227 (332)
|++..++|+|.|++||+|..++. .+ ...+|.+++ .+.+.|.. +
T Consensus 180 C~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG------------------~~~~~C~~----------g 231 (267)
T 4fbr_A 180 TLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGG------------------FWMIGARN----------G 231 (267)
T ss_dssp EEEEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEE------------------EEECCCCT----------T
T ss_pred eeCCCCCeEEeCCCCccccccccccceeccCCCccCCcccCCC------------------eEEEecCC----------C
Confidence 99999999999999999864321 11 111111111 11111221 2
Q ss_pred EEecccCccccccccCccCCCCCCCCCeeeecCCceeeecCCCcccC
Q psy2857 228 FVIEDAKRNLNRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGD 274 (332)
Q Consensus 228 ~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~ 274 (332)
+.. +.| +.+|.++++|++...+|.|+|++||+|.
T Consensus 232 ~n~------------~~c-~~~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 232 QNV------------VAL-NVASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp CCE------------EEE-EEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred Ccc------------ccC-CcCCCCCCEeeCCCcceeecCCCCcccc
Confidence 211 122 2478899999999999999999999874
No 21
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.57 E-value=4.7e-15 Score=101.95 Aligned_cols=76 Identities=39% Similarity=0.976 Sum_probs=65.6
Q ss_pred ccccCccCC-CCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCC
Q psy2857 239 RVDINECQS-NPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKP 317 (332)
Q Consensus 239 ~~~~~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~ 317 (332)
+.++|+|.. .+|. +++|+++.++|+|.|++||+++. ..|++||+|.. .++|.+ ++|+++.++|+|.|++||+|..
T Consensus 2 C~dideC~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~g-~~C~dideC~~-~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 2 AVDMDECKEPDVCK-HGQCINTDGSYRCECPFGYILAG-NECVDTDECSV-GNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CCCCCSSSSTTSCS-SSEECCCSSCCCEECCTTEEEET-TEEEECCGGGT-CCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred CCccccCCCCCCcC-CCEEEecCCCEEEECCCCeECCC-CccCCcccccC-CCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 568899986 7896 48999999999999999998532 36899999985 468975 6999999999999999999987
Q ss_pred C
Q psy2857 318 D 318 (332)
Q Consensus 318 ~ 318 (332)
.
T Consensus 78 ~ 78 (82)
T 1emn_A 78 M 78 (82)
T ss_dssp S
T ss_pred C
Confidence 6
No 22
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.55 E-value=1.6e-15 Score=119.61 Aligned_cols=148 Identities=24% Similarity=0.497 Sum_probs=105.7
Q ss_pred eEEEEEecCCceecccCCcCCCC-CCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCCCCCCC-CCCceeeCCC
Q psy2857 3 FVVLVRILLGVRAIVDINECQSN-PCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCG-LRAICENTVP 80 (332)
Q Consensus 3 ~~~~c~c~~g~~~~~~~~~C~~~-~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~-~~~~C~~~~~ 80 (332)
....|.|.+||+|+.....|... +|..+++|.. ...|+|.+||+|..++ .++|. ..|. .++.|++
T Consensus 15 ~~~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~----~~~C~---~~C~~~~g~C~~--- 81 (169)
T 2vj2_A 15 GRSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECN----RAICR---QGCSPKHGSCKL--- 81 (169)
T ss_dssp ------CCTTEETTTTCEECCCEEETTEEEEECS---SCCEEECTTEESTTSC----EECCC---TTCCTTTEECSS---
T ss_pred cCeeeeCCCcCcCCCcccccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCC----CCCCC---CCCCCCCcccCC---
Confidence 45679999999998655567654 4777889964 3479999999997654 23453 3465 5677876
Q ss_pred CeeeeCCCCCCCCCCCccceeeccCCCCCCCCccccCCCccc-CceecCCCCccCCCCeee-cCCCCCCCCCCCCCCcee
Q psy2857 81 GFNCLCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNAECV-DGLCYCRPGFDARGSVCV-DVDECQLGDPCGPQAQCT 158 (332)
Q Consensus 81 ~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~-~~~c~C~~g~~~~g~~c~-~~~~C~~~~~C~~~~~C~ 158 (332)
.|.|.|.+||.|..+.. |.....|.++ .|+ .++|.|.+||. |..|. ++++|....+|.++++|+
T Consensus 82 ~~~C~C~~G~~G~~C~~-----------C~~~~~C~~g-~C~~~~~C~C~~G~~--G~~C~~~~~~C~~~~~C~~~g~C~ 147 (169)
T 2vj2_A 82 PGDCRCQYGWQGLYCDK-----------CIPHPGCVHG-ICNEPWQCLCETNWG--GQLCDKDLNYCGTHQPCLNGGTCS 147 (169)
T ss_dssp TTCCEECTTEESSSSCE-----------ECCCTTCSSE-ECSSTTCCEECTTEE--TTTTCEESCHHHHTCCCCTTCEEE
T ss_pred CCeeECCCCCCCCCccc-----------CCCCCCCCCC-CcCCCCEEeCCCCCC--CCcccCCCCCCCCCCCCCCCCEEc
Confidence 46999999999985431 1111124433 554 46899999999 77886 788886447899999999
Q ss_pred cC-CCceEeeCCCCCccCCC
Q psy2857 159 NT-PGSFRCDCVEGYVGAPP 177 (332)
Q Consensus 159 ~~-~~~~~C~C~~G~~g~~~ 177 (332)
++ .++|.|.|++||.|..+
T Consensus 148 ~~~~~~~~C~C~~G~~G~~C 167 (169)
T 2vj2_A 148 NTGPDKYQCSCPEGYSGPNC 167 (169)
T ss_dssp ECSTTCEEEECCTTCCSTTS
T ss_pred CCCCCCcEeECCCCCcCcCc
Confidence 96 78999999999998754
No 23
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.53 E-value=6.8e-16 Score=119.10 Aligned_cols=133 Identities=31% Similarity=0.720 Sum_probs=86.6
Q ss_pred ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCC
Q psy2857 17 VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPY-QACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPD 95 (332)
Q Consensus 17 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~-~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~ 95 (332)
.|||+|.+.||. +++|+++.++|.|.|++||+|+.. ..|.+. . ...|..+|.+.
T Consensus 2 ~dideC~~~pC~-ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~-------------------~---~~~C~~~~~g~-- 56 (147)
T 2w86_A 2 ADIDECESSPCI-NGVCKNSPGSFICECSSESTLDPTKTICIET-------------------I---KGTCWQTVIDG-- 56 (147)
T ss_dssp CCCCGGGGCCSB-TSEEEEETTEEEEECCTTEEECTTSSBEEEC-------------------C---CEEEEEEEETT--
T ss_pred CcCccCcCCCCC-CCEeECCCCCEEeECCCCcccCCCCCeecCC-------------------C---CCcccCCCCCC--
Confidence 589999999997 589999999999999999998754 223221 1 01222222222
Q ss_pred Cccceee-ccCCCCCCCCcccc------CCCcc--cCceecCCCCccC-CCCeeecCCCCC-CCCCCCCCCceecCCCce
Q psy2857 96 AKVACEQ-VDVTSECSSNFECV------NNAEC--VDGLCYCRPGFDA-RGSVCVDVDECQ-LGDPCGPQAQCTNTPGSF 164 (332)
Q Consensus 96 ~~~~c~~-~~~~~~c~~~~~C~------~~~~c--~~~~c~C~~g~~~-~g~~c~~~~~C~-~~~~C~~~~~C~~~~~~~ 164 (332)
.|+. ++ .|.....|. ....| -.+.|.|++||.+ .+..|.++++|. .+.+|.+ ++|+++.++|
T Consensus 57 ---~C~~~~~---~c~~~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C~n~~g~y 129 (147)
T 2w86_A 57 ---RCEININ---GATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVNTRGSF 129 (147)
T ss_dssp ---EEEEEEE---EEECHHHHHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSS-SEEEEETTEE
T ss_pred ---ccccCCC---ccccCCccccCcCcccCCCcccCCCcccCCCccccCCCCccCccccccCCCCCCCC-CEEECCCCCE
Confidence 1211 00 000000000 01111 1256789999964 488999999997 3466885 5999999999
Q ss_pred EeeCCCCCccCCCCccc
Q psy2857 165 RCDCVEGYVGAPPRIKC 181 (332)
Q Consensus 165 ~C~C~~G~~g~~~~~~c 181 (332)
.|.|++||.++...+.|
T Consensus 130 ~C~C~~Gy~g~~~~~~C 146 (147)
T 2w86_A 130 KCQCPSGMTLDATGRIC 146 (147)
T ss_dssp EEECCTTCCBCTTSSCB
T ss_pred EeeCCCCCccCCCCCee
Confidence 99999999998766555
No 24
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.52 E-value=2.2e-15 Score=111.37 Aligned_cols=108 Identities=33% Similarity=0.741 Sum_probs=79.4
Q ss_pred ccCCcCCCCCCCCCCeeeeC-CCCeEeeCCCCCccCCCCCCCCcccccC--CCCCCCCCCceeeCCCCeeeeCCCCCCCC
Q psy2857 17 VDINECQSNPCGVNATCIDT-QGSYSCVCKEHYTGDPYQACSDIDECKA--LDKPCGLRAICENTVPGFNCLCPKGYSGK 93 (332)
Q Consensus 17 ~~~~~C~~~~C~~~g~C~~~-~g~~~C~C~~G~~g~~~~~C~~~~~c~~--~~~~C~~~~~C~~~~~~~~C~C~~g~~~~ 93 (332)
.|||+|...||. ++|+++ .++|.|.|++||+|... ++++|.. ...+|. +.|++ .++|.|.|++||.+.
T Consensus 2 ~dideC~~~pC~--~~C~~~~~g~y~C~C~~Gy~g~~~----~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~ 72 (118)
T 1dx5_I 2 EPVDPCFRANCE--YQCQPLDQTSYLCVCAEGFAPIPH----EPHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILD 72 (118)
T ss_dssp CCCCGGGGCCCS--SEEEECSSSCEEEECCTTEEEETT----EEEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEE
T ss_pred CccccCCCCCCC--CCCCCCCCCCEEeECCCCccccCC----CCCccccccCCCCCC--CcccC-CCCeEeECCCCccCC
Confidence 478999999997 399999 89999999999998743 3555542 112332 55665 366677777666542
Q ss_pred CCCccceeeccCCCCCCCCccccCCCcccCceecCCCCccCCCCeeecCCCCCCCCCCCCCCceecCCCceEeeCCCCCc
Q psy2857 94 PDAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDARGSVCVDVDECQLGDPCGPQAQCTNTPGSFRCDCVEGYV 173 (332)
Q Consensus 94 ~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~g~~c~~~~~C~~~~~C~~~~~C~~~~~~~~C~C~~G~~ 173 (332)
. +..|.++++|...++| .++|+++.++|.|.|++||.
T Consensus 73 ~-----------------------------------------g~~C~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~ 109 (118)
T 1dx5_I 73 D-----------------------------------------GFICTDIDECENGGFC--SGVCHNLPGTFECICGPDSA 109 (118)
T ss_dssp T-----------------------------------------TTEEEECCHHHHCSSC--SSEEEECSSSEEEEECSSSS
T ss_pred C-----------------------------------------CCccccccccCCCCCC--cCeEEeCCCCEEEECCCCCc
Confidence 1 4566777888644778 68999999999999999999
Q ss_pred cCC
Q psy2857 174 GAP 176 (332)
Q Consensus 174 g~~ 176 (332)
+..
T Consensus 110 g~~ 112 (118)
T 1dx5_I 110 LAG 112 (118)
T ss_dssp CEE
T ss_pred cCC
Confidence 854
No 25
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.50 E-value=1.4e-14 Score=110.99 Aligned_cols=86 Identities=29% Similarity=0.674 Sum_probs=68.3
Q ss_pred ccccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCee-ecCCCceeeeCCCCCCC
Q psy2857 237 LNRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAIC-ENTVPGFNCLCPKGYSG 315 (332)
Q Consensus 237 ~~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C-~~~~g~~~C~C~~g~~g 315 (332)
..+.++|+|.++||.++++|++..++|+|.|++||+|. .|+++|+|...+++|.+ +| +++.++|.|.|++||++
T Consensus 43 ~~c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l 117 (146)
T 1x7a_L 43 KQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK---NCELDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRL 117 (146)
T ss_dssp -------CCSSCSSCTTCEEEECSSCEEEECCSSEEST---TTCEECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEE
T ss_pred ccCCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC---cCCCCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEe
Confidence 35789999999999999999999999999999999987 46778999876667864 89 99999999999999997
Q ss_pred CCCCCcccccccc
Q psy2857 316 KPDAKVACEQEKA 328 (332)
Q Consensus 316 ~~~~~~~c~~~~~ 328 (332)
..+++ +|..+.+
T Consensus 118 ~~dG~-~C~~~~~ 129 (146)
T 1x7a_L 118 APDQK-SCKPAVP 129 (146)
T ss_dssp CTTSS-SEEECSS
T ss_pred CCCCC-cCCCCCC
Confidence 76654 6776543
No 26
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.48 E-value=3.3e-14 Score=104.41 Aligned_cols=85 Identities=31% Similarity=0.590 Sum_probs=65.6
Q ss_pred ccccCccCCCC--------CCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCceeeeCC
Q psy2857 239 RVDINECQSNP--------CGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCP 310 (332)
Q Consensus 239 ~~~~~~C~~~~--------C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~ 310 (332)
.+|+|+|...| |.++++|++..++|+|.|++||+|..++.-.++++|......|. .+|+++.++|+|.|+
T Consensus 3 ~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~--~~C~n~~g~y~C~C~ 80 (114)
T 1aut_L 3 HVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCT--HYCLEEVGWRRCSCA 80 (114)
T ss_dssp -----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCS--SEEEECSSSEEEECC
T ss_pred ceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCC--CEeECCCCCEEeECC
Confidence 35778898888 99999999999999999999999987653223457876555675 399999999999999
Q ss_pred CCCCCCCCCCcccccc
Q psy2857 311 KGYSGKPDAKVACEQE 326 (332)
Q Consensus 311 ~g~~g~~~~~~~c~~~ 326 (332)
+||+|..+++ .|+++
T Consensus 81 ~G~~~~~~g~-~C~~~ 95 (114)
T 1aut_L 81 PGYKLGDDLL-QCHPA 95 (114)
T ss_dssp TTEEECTTSS-CEEEC
T ss_pred CCeeECCCCC-ccCcC
Confidence 9999887765 67654
No 27
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.48 E-value=1.1e-13 Score=130.80 Aligned_cols=141 Identities=26% Similarity=0.594 Sum_probs=105.0
Q ss_pred cCCCCCCCCCCeeeeCCCCeE---eeCCCCCccCCCCCCC------CcccccCCC--CCCCCCCceeeCCCCeeeeCC--
Q psy2857 21 ECQSNPCGVNATCIDTQGSYS---CVCKEHYTGDPYQACS------DIDECKALD--KPCGLRAICENTVPGFNCLCP-- 87 (332)
Q Consensus 21 ~C~~~~C~~~g~C~~~~g~~~---C~C~~G~~g~~~~~C~------~~~~c~~~~--~~C~~~~~C~~~~~~~~C~C~-- 87 (332)
+|...||.+.+.|.+..|.|. |.|.+||+|..++.-. ..++|...+ .+|.+++.|++ +.|.|.
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~ 511 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSS 511 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCC
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecC
Confidence 677888988899998888888 9999999998774211 124565322 45888999984 489999
Q ss_pred --CCCCCCCCCccceeeccCCCCCCC--CccccCCCcccCceecCCCCccCCCCeee---cCCCCCC--CCCCCCCCcee
Q psy2857 88 --KGYSGKPDAKVACEQVDVTSECSS--NFECVNNAECVDGLCYCRPGFDARGSVCV---DVDECQL--GDPCGPQAQCT 158 (332)
Q Consensus 88 --~g~~~~~~~~~~c~~~~~~~~c~~--~~~C~~~~~c~~~~c~C~~g~~~~g~~c~---~~~~C~~--~~~C~~~~~C~ 158 (332)
+||.|..+ +... ..|.. ...|.+++.|..+.|.|.+||. |..|. ++++|.. ..+|.++++|+
T Consensus 512 ~~~Gy~G~~C-----e~~~--~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~--G~~CeC~~~~~~C~~~~g~~C~~~G~C~ 582 (690)
T 3fcs_B 512 DFGKITGKYC-----ECDD--FSCVRYKGEMCSGHGQCSCGDCLCDSDWT--GYYCNCTTRTDTCMSSNGLLCSGRGKCE 582 (690)
T ss_dssp SSCCCBSTTS-----CBCS--SCCCBSSSSBGGGSEEEETTEEEECTTEE--SSSSCEECCCTTTBCTTSSBTSSSCEEE
T ss_pred CCCCeeCCCc-----Cccc--CcCcCCCCCCCCCCCEecCCeeECcCCCc--CCCCccCCCCCcccCCCCCCCCCCCEEe
Confidence 99999854 3111 13443 2478889999999999999999 67775 4667762 26799999997
Q ss_pred cCCCceEeeC-CCCCccCCCC
Q psy2857 159 NTPGSFRCDC-VEGYVGAPPR 178 (332)
Q Consensus 159 ~~~~~~~C~C-~~G~~g~~~~ 178 (332)
+. .|.| ++||.|..++
T Consensus 583 ~g----~C~C~~~Gy~G~~Ce 599 (690)
T 3fcs_B 583 CG----SCVCIQPGSYGDTCE 599 (690)
T ss_dssp TT----EEECCSTTCBSTTSC
T ss_pred CC----EEECCCCCccCCCcC
Confidence 63 8999 9999987543
No 28
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.44 E-value=3.1e-13 Score=127.64 Aligned_cols=169 Identities=27% Similarity=0.572 Sum_probs=115.3
Q ss_pred CCCCCCCCceeeCCCCee---eeCCCCCCCCCCCcccee-eccCCCCCCCC---ccccCCCcccCceecCC----CCccC
Q psy2857 66 DKPCGLRAICENTVPGFN---CLCPKGYSGKPDAKVACE-QVDVTSECSSN---FECVNNAECVDGLCYCR----PGFDA 134 (332)
Q Consensus 66 ~~~C~~~~~C~~~~~~~~---C~C~~g~~~~~~~~~~c~-~~~~~~~c~~~---~~C~~~~~c~~~~c~C~----~g~~~ 134 (332)
..+|.+.+.|.+..|.|. |.|.+||.|..+....-. .......|... ..|.+++.|..+.|.|. +||.
T Consensus 439 ~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~g~C~C~~~~~~Gy~- 517 (690)
T 3fcs_B 439 AQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKIT- 517 (690)
T ss_dssp TTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECSSSEEECCCSSCCCB-
T ss_pred CCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEECCeeEeecCCCCCee-
Confidence 367888889987778787 999999999855321000 00000134432 35888888888888888 8887
Q ss_pred CCCeee-cCCCCCC--CCCCCCCCceecCCCceEeeCCCCCccCCCCccccccCcccceeeccccCcccccccCCccccc
Q psy2857 135 RGSVCV-DVDECQL--GDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDYLHSVASDISDIL 211 (332)
Q Consensus 135 ~g~~c~-~~~~C~~--~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~~~~~~~~~~~~~ 211 (332)
|..|. ++.+|.. ..+|.++++|.+ +.|.|++||.|..+. |
T Consensus 518 -G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~Ce--C------------------------------ 560 (690)
T 3fcs_B 518 -GKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCN--C------------------------------ 560 (690)
T ss_dssp -STTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSC--E------------------------------
T ss_pred -CCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCc--c------------------------------
Confidence 77774 4556752 146777788876 588888888876432 0
Q ss_pred ceecccccceecccccEEecccCccccccccCccCC---CCCCCCCeeeecCCceeeec-CCCcccCCCCcccccccccC
Q psy2857 212 TIIHEFSRIFSKHLKLFVIEDAKRNLNRVDINECQS---NPCGVNATCIDTQGSYSCVC-KEHYTGDPYQACSDIDECKA 287 (332)
Q Consensus 212 c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~---~~C~~~~~C~~~~~~~~C~C-~~G~~g~~~~~C~~~d~C~~ 287 (332)
-.++++|.. .+|.++++|++. +|.| ++||+|..|+.| ..|
T Consensus 561 ---------------------------~~~~~~C~~~~g~~C~~~G~C~~g----~C~C~~~Gy~G~~Ce~C---~~C-- 604 (690)
T 3fcs_B 561 ---------------------------TTRTDTCMSSNGLLCSGRGKCECG----SCVCIQPGSYGDTCEKC---PTC-- 604 (690)
T ss_dssp ---------------------------ECCCTTTBCTTSSBTSSSCEEETT----EEECCSTTCBSTTSCBC---TTS--
T ss_pred ---------------------------CCCCCcccCCCCCCCCCCCEEeCC----EEECCCCCccCCCcCcC---CCC--
Confidence 012234543 578889999763 8999 999999977643 335
Q ss_pred CCCCCCCCCeeecCCCceeeeCCCCCCCCC
Q psy2857 288 LDKPCGLRAICENTVPGFNCLCPKGYSGKP 317 (332)
Q Consensus 288 ~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~ 317 (332)
+.+|.+++.|++ |..+|+|..
T Consensus 605 -~~~C~~~g~Cv~--------C~~g~tG~~ 625 (690)
T 3fcs_B 605 -PDACTFKKECVE--------CKKFDRGAL 625 (690)
T ss_dssp -CCTTTSCCGGGT--------TTTTCCSSS
T ss_pred -CCCCCCCCCccc--------CCCCCccCC
Confidence 368988898876 889999984
No 29
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.44 E-value=7.5e-14 Score=97.12 Aligned_cols=80 Identities=38% Similarity=0.912 Sum_probs=65.3
Q ss_pred ccCccCCCC--CCCCCeeeecCCceeeecCCCcccCCC-CcccccccccCCCCCCCCCCeeecCCCceeeeCC--CCCCC
Q psy2857 241 DINECQSNP--CGVNATCIDTQGSYSCVCKEHYTGDPY-QACSDIDECKALDKPCGLRAICENTVPGFNCLCP--KGYSG 315 (332)
Q Consensus 241 ~~~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~~g~~~-~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~--~g~~g 315 (332)
++++|...+ | ++++|++..++|+|.|++||++... ..|++||+|.. ++|. ++|+++.++|+|.|+ .||..
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~--~~C~--~~C~n~~g~y~C~C~g~~G~~~ 76 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSE--NMCA--QLCVNYPGGYTCYCDGKKGFKL 76 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHH--SCCS--SEECCCSSSCCEECCSSSCCBC
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCC--CCCC--CEEEccCCCEEEECCCCcCCcc
Confidence 678998877 8 7899999999999999999996542 46899999975 6896 799999999999995 66666
Q ss_pred CCCCCcccccc
Q psy2857 316 KPDAKVACEQE 326 (332)
Q Consensus 316 ~~~~~~~c~~~ 326 (332)
....+ .|.+|
T Consensus 77 ~~~~~-~C~di 86 (87)
T 1z6c_A 77 AQDQK-SCEVV 86 (87)
T ss_dssp CTTSS-SCBCC
T ss_pred cCCCC-cceEC
Confidence 55443 57655
No 30
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.39 E-value=6.1e-14 Score=101.28 Aligned_cols=75 Identities=33% Similarity=0.837 Sum_probs=31.7
Q ss_pred ccCccCCC--CCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCC
Q psy2857 241 DINECQSN--PCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPD 318 (332)
Q Consensus 241 ~~~~C~~~--~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~ 318 (332)
++++|... .|. +.|++..++|+|.|++||+|.....|+|||+|.. .++|. ++|+|+.++|.|.|++||++...
T Consensus 28 d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~-~~~C~--~~C~n~~gsy~C~C~~Gy~~~~d 102 (107)
T 2w2n_E 28 GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-PDTCS--QLCVNLEGGYKCQCEEGFQLDPH 102 (107)
T ss_dssp SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC-------------------------------------
T ss_pred cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccccccCC-CCCcC--CeeecCCCCEEEECCCCceECCC
Confidence 66788753 453 6899999999999999999965567999999974 46886 79999999999999999999876
Q ss_pred CC
Q psy2857 319 AK 320 (332)
Q Consensus 319 ~~ 320 (332)
.+
T Consensus 103 ~~ 104 (107)
T 2w2n_E 103 TK 104 (107)
T ss_dssp --
T ss_pred CC
Confidence 55
No 31
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.39 E-value=2.5e-13 Score=94.29 Aligned_cols=78 Identities=37% Similarity=0.916 Sum_probs=65.5
Q ss_pred ccCCcCCCCC--CCCCCeeeeCCCCeEeeCCCCCccCC--CCCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCC
Q psy2857 17 VDINECQSNP--CGVNATCIDTQGSYSCVCKEHYTGDP--YQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSG 92 (332)
Q Consensus 17 ~~~~~C~~~~--C~~~g~C~~~~g~~~C~C~~G~~g~~--~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~ 92 (332)
.|||+|...+ |. +++|+++.++|.|.|++||++.. ...|+++++|...+..|. +++|+++.++|.|.|++||.+
T Consensus 1 ~dideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 1 TDIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp CCCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCC
T ss_pred CccccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCccc
Confidence 4789999877 95 57999999999999999999642 367889999987555675 589999999999999999998
Q ss_pred CCCC
Q psy2857 93 KPDA 96 (332)
Q Consensus 93 ~~~~ 96 (332)
....
T Consensus 79 ~~~~ 82 (86)
T 1lmj_A 79 SPNI 82 (86)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 7543
No 32
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.38 E-value=8.5e-14 Score=110.91 Aligned_cols=85 Identities=26% Similarity=0.636 Sum_probs=33.1
Q ss_pred ccccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCccccc-ccccCCCCCCCCCCeeecCCCceeeeCCCCCCC
Q psy2857 237 LNRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDI-DECKALDKPCGLRAICENTVPGFNCLCPKGYSG 315 (332)
Q Consensus 237 ~~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~-d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g 315 (332)
..+.++++|...||.++++|++..++|+|.|++||+|..|. .++ |+|...+++|.+ .|+++.++|.|.|++||++
T Consensus 37 ~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce--~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l 112 (195)
T 1nfu_B 37 NKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE--LFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTL 112 (195)
T ss_dssp ----------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEE
T ss_pred ccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceecccc--ccccccccCCCCCCCC--EeECCCCCeEEECCCCcee
Confidence 35778999999999999999999999999999999987543 236 899876677874 9999999999999999996
Q ss_pred CCCCCcccccc
Q psy2857 316 KPDAKVACEQE 326 (332)
Q Consensus 316 ~~~~~~~c~~~ 326 (332)
...++ .|..+
T Consensus 113 ~~dG~-~C~~~ 122 (195)
T 1nfu_B 113 ADNGK-ACIPT 122 (195)
T ss_dssp CTTSS-CEEES
T ss_pred CCCCC-ccccC
Confidence 65544 56654
No 33
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.37 E-value=1e-13 Score=104.71 Aligned_cols=84 Identities=27% Similarity=0.703 Sum_probs=33.7
Q ss_pred cccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccc-c-ccccCCCCCCCCCCeeecCCCceeeeCCCCCCC
Q psy2857 238 NRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSD-I-DECKALDKPCGLRAICENTVPGFNCLCPKGYSG 315 (332)
Q Consensus 238 ~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~-~-d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g 315 (332)
.+.++++|.++||.++++|++..++|+|.|++||+|.. |++ + |+|...+++|.+ +|+++.++|.|.|++||++
T Consensus 38 ~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l 112 (134)
T 2vh0_B 38 KYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTL 112 (134)
T ss_dssp ----------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEE
T ss_pred cCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCc---cccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEE
Confidence 46789999999999999999999999999999999874 555 6 889876667864 9999999999999999997
Q ss_pred CCCCCccccccc
Q psy2857 316 KPDAKVACEQEK 327 (332)
Q Consensus 316 ~~~~~~~c~~~~ 327 (332)
...++ .|..+.
T Consensus 113 ~~~g~-~C~~~~ 123 (134)
T 2vh0_B 113 ADNGK-ACIPTG 123 (134)
T ss_dssp CTTSS-CEEESS
T ss_pred CCCCC-ccCcCC
Confidence 66554 676543
No 34
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.36 E-value=7.2e-13 Score=101.14 Aligned_cols=86 Identities=24% Similarity=0.506 Sum_probs=68.3
Q ss_pred cccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCC---eeecCCC-ceeeeCCCCC
Q psy2857 238 NRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRA---ICENTVP-GFNCLCPKGY 313 (332)
Q Consensus 238 ~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~---~C~~~~g-~~~C~C~~g~ 313 (332)
.+.++++|.++||.++++|++..++|+|.|++||+|..+. .++++|.. .++.+++ +|+++.+ +|+|.|++||
T Consensus 43 ~c~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~--~~~~~c~~--c~~~~~~C~~~C~~~~g~~y~C~C~~Gy 118 (142)
T 2c4f_L 43 SYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE--THKDDQLI--CVNENGGCEQYCSDHTGTKRSCRCHEGY 118 (142)
T ss_dssp HHTTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC--EEGGGCCS--TTTGGGGCSSEEECCTTSCCEEECCTTE
T ss_pred cCCccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccc--cCcccccc--ccCCCCCccCEeECCCCCCEEEECCCCc
Confidence 4568899999999999999999999999999999998654 23666532 2333333 9999999 9999999999
Q ss_pred CCCCCCCcccccccc
Q psy2857 314 SGKPDAKVACEQEKA 328 (332)
Q Consensus 314 ~g~~~~~~~c~~~~~ 328 (332)
++..+++ +|..+++
T Consensus 119 ~l~~dG~-~C~~~~e 132 (142)
T 2c4f_L 119 SLLADGV-SCTPTVE 132 (142)
T ss_dssp EECTTSS-CEEESSS
T ss_pred eECCCCC-CCCCCCc
Confidence 9776655 6877655
No 35
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.32 E-value=2.8e-12 Score=88.02 Aligned_cols=78 Identities=44% Similarity=0.999 Sum_probs=63.8
Q ss_pred CCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccceeeccCCCCCCCCccccCCCcccCceecCCCCccC
Q psy2857 55 ACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDA 134 (332)
Q Consensus 55 ~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~ 134 (332)
+|+++++|.. +.+|. ++.|+++.++|.|.|++||.+.
T Consensus 1 sC~dideC~~-~~~C~-~g~C~n~~g~y~C~C~~Gy~~~----------------------------------------- 37 (82)
T 1emn_A 1 SAVDMDECKE-PDVCK-HGQCINTDGSYRCECPFGYILA----------------------------------------- 37 (82)
T ss_dssp CCCCCCSSSS-TTSCS-SSEECCCSSCCCEECCTTEEEE-----------------------------------------
T ss_pred CCCccccCCC-CCCcC-CCEEEecCCCEEEECCCCeECC-----------------------------------------
Confidence 3678999975 57897 4899999999999999998742
Q ss_pred CCCeeecCCCCCCCCCCCCCCceecCCCceEeeCCCCCccCCC
Q psy2857 135 RGSVCVDVDECQLGDPCGPQAQCTNTPGSFRCDCVEGYVGAPP 177 (332)
Q Consensus 135 ~g~~c~~~~~C~~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~ 177 (332)
+..|.++++|...++|.+ ++|+++.++|.|.|++||.++..
T Consensus 38 -g~~C~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 38 -GNECVDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp -TTEEEECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCSS
T ss_pred -CCccCCcccccCCCCCCC-CEeECCCCCEEeECCCCeEeCCC
Confidence 455667788865578875 69999999999999999998764
No 36
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.31 E-value=2.2e-12 Score=94.59 Aligned_cols=84 Identities=31% Similarity=0.591 Sum_probs=63.3
Q ss_pred ccCCcCCCCC--------CCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCC
Q psy2857 17 VDINECQSNP--------CGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPK 88 (332)
Q Consensus 17 ~~~~~C~~~~--------C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~ 88 (332)
.|+++|...| |.++++|+++.++|.|.|++||+|..++.-.++++|...+..|.. +|+++.++|.|.|.+
T Consensus 4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~ 81 (114)
T 1aut_L 4 VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAP 81 (114)
T ss_dssp ----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCT
T ss_pred eecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCC
Confidence 4778999999 999999999999999999999999865432234567643445643 899999999999999
Q ss_pred CCCCCCCCccceeec
Q psy2857 89 GYSGKPDAKVACEQV 103 (332)
Q Consensus 89 g~~~~~~~~~~c~~~ 103 (332)
||.+....+ .|+.+
T Consensus 82 G~~~~~~g~-~C~~~ 95 (114)
T 1aut_L 82 GYKLGDDLL-QCHPA 95 (114)
T ss_dssp TEEECTTSS-CEEEC
T ss_pred CeeECCCCC-ccCcC
Confidence 999876554 56553
No 37
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.24 E-value=8.7e-12 Score=87.19 Aligned_cols=78 Identities=19% Similarity=0.476 Sum_probs=62.2
Q ss_pred ccceecccccceecccccEEecccCccccccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCccc--ccccccC
Q psy2857 210 ILTIIHEFSRIFSKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACS--DIDECKA 287 (332)
Q Consensus 210 ~~c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~--~~d~C~~ 287 (332)
|.|+|.+ ||++..+ ++++|...|| ++..++|+|.|++||+ .|+ ++|+|..
T Consensus 2 y~C~C~~----------g~~g~~c-------~~~~c~~~pC------~n~~~~y~C~C~~G~~-----~C~~~~~~~C~~ 53 (91)
T 1tpg_A 2 YQVICRD----------EKTQMIY-------QQHQSWLRPV------LRSNRVEYCWCNSGRA-----QCHSVPVKSCSE 53 (91)
T ss_dssp CCCCCBC----------SSSCCBC-------CSSCEEEEEC------SSSSCEEEEECSSSCC-----BCCEECEEECSS
T ss_pred eeeECCC----------CCcCCeE-------CCCcccCCcc------ccCCCCcEeECCCCCc-----ccccCcCCcccC
Confidence 5677777 8776533 4677766654 4567899999999996 464 7999986
Q ss_pred CCCCCCCCCeeecCC--CceeeeCCCCCCCCC
Q psy2857 288 LDKPCGLRAICENTV--PGFNCLCPKGYSGKP 317 (332)
Q Consensus 288 ~~~~C~~~~~C~~~~--g~~~C~C~~g~~g~~ 317 (332)
.+|.++++|++.. ++|+|.|++||+|..
T Consensus 54 --~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~ 83 (91)
T 1tpg_A 54 --PRCFNGGTCQQALYFSDFVCQCPEGFAGKS 83 (91)
T ss_dssp --CCSCTTCEEEEESSSSCEEEECCTTCBSSS
T ss_pred --CCCCCCCEeecCCCCCCeEeECCCCCcCCc
Confidence 6899999999987 999999999999873
No 38
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.23 E-value=7.6e-12 Score=95.71 Aligned_cols=82 Identities=30% Similarity=0.714 Sum_probs=64.6
Q ss_pred ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCCCCCCCCCCce-eeCCCCeeeeCCCCCCCCCC
Q psy2857 17 VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAIC-ENTVPGFNCLCPKGYSGKPD 95 (332)
Q Consensus 17 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C-~~~~~~~~C~C~~g~~~~~~ 95 (332)
.|+|+|.+.||.++++|+++.++|.|.|++||+|. .|.++++|...+.+|.. .| +++.++|.|.|.+||.+...
T Consensus 46 ~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~d 120 (146)
T 1x7a_L 46 VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK---NCELDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPD 120 (146)
T ss_dssp ----CCSSCSSCTTCEEEECSSCEEEECCSSEEST---TTCEECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTT
T ss_pred CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC---cCCCCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCC
Confidence 78999999999999999999999999999999985 46677889764557764 89 99999999999999996544
Q ss_pred Cccceeecc
Q psy2857 96 AKVACEQVD 104 (332)
Q Consensus 96 ~~~~c~~~~ 104 (332)
+. .|+.++
T Consensus 121 G~-~C~~~~ 128 (146)
T 1x7a_L 121 QK-SCKPAV 128 (146)
T ss_dssp SS-SEEECS
T ss_pred CC-cCCCCC
Confidence 33 565543
No 39
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.22 E-value=5.4e-12 Score=87.65 Aligned_cols=71 Identities=37% Similarity=0.926 Sum_probs=59.4
Q ss_pred ccCCcCCCCC--CCCCCeeeeCCCCeEeeCCCCCccCCC-CCCCCcccccCCCCCCCCCCceeeCCCCeeeeCC--CCCC
Q psy2857 17 VDINECQSNP--CGVNATCIDTQGSYSCVCKEHYTGDPY-QACSDIDECKALDKPCGLRAICENTVPGFNCLCP--KGYS 91 (332)
Q Consensus 17 ~~~~~C~~~~--C~~~g~C~~~~g~~~C~C~~G~~g~~~-~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~--~g~~ 91 (332)
.|+++|...+ | .+++|+++.++|.|.|++||++... ..|+++++|.. .+|. ++|+++.++|.|.|+ .||.
T Consensus 1 ~dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~--~~C~--~~C~n~~g~y~C~C~g~~G~~ 75 (87)
T 1z6c_A 1 KDVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSE--NMCA--QLCVNYPGGYTCYCDGKKGFK 75 (87)
T ss_dssp CCSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHH--SCCS--SEECCCSSSCCEECCSSSCCB
T ss_pred CccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCC--CCCC--CEEEccCCCEEEECCCCcCCc
Confidence 4789999988 8 6899999999999999999996432 56889999964 6785 799999999999995 5554
Q ss_pred C
Q psy2857 92 G 92 (332)
Q Consensus 92 ~ 92 (332)
.
T Consensus 76 ~ 76 (87)
T 1z6c_A 76 L 76 (87)
T ss_dssp C
T ss_pred c
Confidence 3
No 40
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.20 E-value=1.9e-11 Score=106.68 Aligned_cols=83 Identities=28% Similarity=0.646 Sum_probs=69.5
Q ss_pred ccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCC-CCCCCCCCeeecCCCceeeeCCCCCCCCCCC
Q psy2857 241 DINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKAL-DKPCGLRAICENTVPGFNCLCPKGYSGKPDA 319 (332)
Q Consensus 241 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~-~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~ 319 (332)
++++|.++||.++++|++..++|+|.|++||+|..|+ .|+|+|... .++|.+ .|+++.++|.|.|++||++....
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~--~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~~~~ 79 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCE--LAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLGEDH 79 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSC--CCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECCTTS
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccc--cCcccCCCCCCCCCcC--ccccCCCeeEEeccccccccccc
Confidence 6789999999999999999999999999999998554 499999863 368975 99999999999999999998765
Q ss_pred Ccccccccc
Q psy2857 320 KVACEQEKA 328 (332)
Q Consensus 320 ~~~c~~~~~ 328 (332)
. .|.++.+
T Consensus 80 ~-~C~~~~~ 87 (317)
T 3h5c_B 80 K-QCVPHDQ 87 (317)
T ss_dssp S-CCEECSS
T ss_pred c-ccccccc
Confidence 4 6776544
No 41
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.12 E-value=1.1e-11 Score=89.41 Aligned_cols=82 Identities=29% Similarity=0.676 Sum_probs=36.9
Q ss_pred ecCCceec-ccCCcCCCC--CCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeee
Q psy2857 9 ILLGVRAI-VDINECQSN--PCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCL 85 (332)
Q Consensus 9 c~~g~~~~-~~~~~C~~~--~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~ 85 (332)
...+|.++ -++++|... .|. +.|+++.++|.|.|++||+|.+...|+++++|.. +.+|. +.|+++.++|.|.
T Consensus 18 ~~~~~~~~~Cd~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~-~~~C~--~~C~n~~gsy~C~ 92 (107)
T 2w2n_E 18 TENLYFQGAMGTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-PDTCS--QLCVNLEGGYKCQ 92 (107)
T ss_dssp --CCCCSCCBSCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC---------------------------
T ss_pred cCCCcCCCCCcCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccccccCC-CCCcC--CeeecCCCCEEEE
Confidence 34677776 568888764 353 6999999999999999999865567889999973 46785 7999999999999
Q ss_pred CCCCCCCCCC
Q psy2857 86 CPKGYSGKPD 95 (332)
Q Consensus 86 C~~g~~~~~~ 95 (332)
|.+||.+...
T Consensus 93 C~~Gy~~~~d 102 (107)
T 2w2n_E 93 CEEGFQLDPH 102 (107)
T ss_dssp ----------
T ss_pred CCCCceECCC
Confidence 9999998644
No 42
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.12 E-value=4.5e-11 Score=83.52 Aligned_cols=76 Identities=20% Similarity=0.500 Sum_probs=62.7
Q ss_pred EEEecCCceec-ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCC--CcccccCCCCCCCCCCceeeCC--C
Q psy2857 6 LVRILLGVRAI-VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACS--DIDECKALDKPCGLRAICENTV--P 80 (332)
Q Consensus 6 ~c~c~~g~~~~-~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~--~~~~c~~~~~~C~~~~~C~~~~--~ 80 (332)
.|.|.+||+|. .++++|...| |++..++|.|+|++||+ .|. ++++|.. .+|.++++|++.. +
T Consensus 3 ~C~C~~g~~g~~c~~~~c~~~p------C~n~~~~y~C~C~~G~~-----~C~~~~~~~C~~--~pC~ngg~C~~~~~~~ 69 (91)
T 1tpg_A 3 QVICRDEKTQMIYQQHQSWLRP------VLRSNRVEYCWCNSGRA-----QCHSVPVKSCSE--PRCFNGGTCQQALYFS 69 (91)
T ss_dssp CCCCBCSSSCCBCCSSCEEEEE------CSSSSCEEEEECSSSCC-----BCCEECEEECSS--CCSCTTCEEEEESSSS
T ss_pred eeECCCCCcCCeECCCcccCCc------cccCCCCcEeECCCCCc-----ccccCcCCcccC--CCCCCCCEeecCCCCC
Confidence 47899999998 5567775554 45667899999999997 564 6899964 7899999999987 8
Q ss_pred CeeeeCCCCCCCCC
Q psy2857 81 GFNCLCPKGYSGKP 94 (332)
Q Consensus 81 ~~~C~C~~g~~~~~ 94 (332)
+|.|.|++||.|..
T Consensus 70 ~~~C~C~~G~~G~~ 83 (91)
T 1tpg_A 70 DFVCQCPEGFAGKS 83 (91)
T ss_dssp CEEEECCTTCBSSS
T ss_pred CeEeECCCCCcCCc
Confidence 99999999999973
No 43
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.11 E-value=1.6e-11 Score=97.74 Aligned_cols=81 Identities=28% Similarity=0.738 Sum_probs=31.1
Q ss_pred ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCC-c-ccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCC
Q psy2857 17 VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSD-I-DECKALDKPCGLRAICENTVPGFNCLCPKGYSGKP 94 (332)
Q Consensus 17 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~-~-~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~ 94 (332)
.|+++|.+.||.++|+|++..++|.|.|++||+|.. |.+ + ++|...+.+|.. .|+++.++|.|.|.+||.+..
T Consensus 40 ~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~---Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~ 114 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceecc---ccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCC
Confidence 789999999999999999999999999999999965 444 5 788765567864 999999999999999999544
Q ss_pred CCccceeec
Q psy2857 95 DAKVACEQV 103 (332)
Q Consensus 95 ~~~~~c~~~ 103 (332)
.+. .|+.+
T Consensus 115 dG~-~C~~~ 122 (195)
T 1nfu_B 115 NGK-ACIPT 122 (195)
T ss_dssp TSS-CEEES
T ss_pred CCC-ccccC
Confidence 333 56554
No 44
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.10 E-value=8.6e-11 Score=105.79 Aligned_cols=80 Identities=34% Similarity=0.823 Sum_probs=67.7
Q ss_pred CccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCCCCcc
Q psy2857 243 NECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVA 322 (332)
Q Consensus 243 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~ 322 (332)
+||...++..++.|++++++|.|.|++||++.....|+|+|||.. +.+|. ..|+|+.++|.|.|++||.+....+ .
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~-~~~C~--~~C~n~~g~~~C~C~~g~~~~~~~~-~ 76 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-PDTCS--QLCVNLEGGYKCQCEEGFQLDPHTK-A 76 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCST-TSSCS--SCCBCCSSSCBCCCCTTCCCCTTTS-S
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhc-cCCCC--CccCCCccceeeecccccccccccc-c
Confidence 467777777788999999999999999999755567999999984 56886 3899999999999999999987765 6
Q ss_pred cccc
Q psy2857 323 CEQE 326 (332)
Q Consensus 323 c~~~ 326 (332)
|..+
T Consensus 77 C~~~ 80 (400)
T 3p5b_L 77 CKAV 80 (400)
T ss_dssp CCCS
T ss_pred eeec
Confidence 7644
No 45
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.09 E-value=2.7e-10 Score=102.36 Aligned_cols=129 Identities=23% Similarity=0.608 Sum_probs=91.3
Q ss_pred EEEEEecCCceecccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCC-CCCc-------ccccCCCCCCCCCCce
Q psy2857 4 VVLVRILLGVRAIVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQA-CSDI-------DECKALDKPCGLRAIC 75 (332)
Q Consensus 4 ~~~c~c~~g~~~~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~-C~~~-------~~c~~~~~~C~~~~~C 75 (332)
+..|.|.+||.|+.....| .+|.++|+|.+ +.+.|.|++||+|..++. |.+- ++|. ....|..++.|
T Consensus 184 ~~~c~C~~g~~G~~C~~~C--~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~-~~~~C~~~g~C 258 (423)
T 2gy5_A 184 LIVRRCEAQKWGPECNHLC--TACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCS-GQEGCKSYVFC 258 (423)
T ss_dssp EEECSSCTTEESTTSCEEC--CCCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECC-STTTTTTCCEE
T ss_pred ccCCcCCCCCCCCCCCCCC--CCCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCC-CCCCCCCCCEE
Confidence 5678999999997544445 37999999987 457899999999988763 4321 2443 23567777777
Q ss_pred eeCCCCeeeeCCCCCCCCCCCccceeeccCCCCCCCCccccCCCcccCceecCCCCccCCCCeeecCCCCCCCCCCCCCC
Q psy2857 76 ENTVPGFNCLCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNAECVDGLCYCRPGFDARGSVCVDVDECQLGDPCGPQA 155 (332)
Q Consensus 76 ~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~~c~~~~c~C~~g~~~~g~~c~~~~~C~~~~~C~~~~ 155 (332)
. .+.|.|.|.+||.|. .|+. .|.+||. |..|.. .| +|.+++
T Consensus 259 ~--~~~~~C~C~~G~~G~-----~C~~------------------------~C~~G~~--G~~C~~--~C----~C~ngg 299 (423)
T 2gy5_A 259 L--PDPYGCSCATGWKGL-----QCNE------------------------ACHPGFY--GPDCKL--RC----SCNNGE 299 (423)
T ss_dssp E--TTTTEEECCBTCBSG-----GGCB------------------------CCCTTBC--SBTTCC--BC----CCTTCC
T ss_pred C--CCCCeEEeCCCcccc-----cccC------------------------ccCCCCc--CCcccc--cc----cCCCCC
Confidence 4 456799999999986 3321 3667776 444432 22 577888
Q ss_pred ceecCCCceEeeCCCCCccCCCCc
Q psy2857 156 QCTNTPGSFRCDCVEGYVGAPPRI 179 (332)
Q Consensus 156 ~C~~~~~~~~C~C~~G~~g~~~~~ 179 (332)
+|.+.. .|.|++||.|..++.
T Consensus 300 ~C~~~~---~C~C~~G~~G~~Ce~ 320 (423)
T 2gy5_A 300 MCDRFQ---GCLCSPGWQGLQCER 320 (423)
T ss_dssp EEETTT---EEECCTTCBSTTSCB
T ss_pred EecCCC---ceECCCCCcCCCCcc
Confidence 998764 499999999987654
No 46
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.09 E-value=2.3e-10 Score=102.84 Aligned_cols=136 Identities=25% Similarity=0.643 Sum_probs=86.1
Q ss_pred eEeeCCCCCccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccceeeccCCCCCCCCccccCCC
Q psy2857 40 YSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQVDVTSECSSNFECVNNA 119 (332)
Q Consensus 40 ~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~~~~C~~~~ 119 (332)
+.|.|.+||.|+.++. .| .+|.+++.|++ +.+.|.|.+||.|.. |+.
T Consensus 185 ~~c~C~~g~~G~~C~~-----~C----~~C~~~G~C~~--~~g~C~C~~G~~G~~-----Ce~----------------- 231 (423)
T 2gy5_A 185 IVRRCEAQKWGPECNH-----LC----TACMNNGVCHE--DTGECICPPGFMGRT-----CEK----------------- 231 (423)
T ss_dssp EECSSCTTEESTTSCE-----EC----CCCCTTCEECT--TTCCEECCTTEESTT-----SCE-----------------
T ss_pred cCCcCCCCCCCCCCCC-----CC----CCCCCCCEEEC--CCCcEeCCCCccCCC-----ccc-----------------
Confidence 3577888888866531 23 26888888876 345888988888873 321
Q ss_pred cccCceecCCCCccCCCCeeecCCCCCCCCCCCCCCceecCCCceEeeCCCCCccCCCCccccccCcccceeeccccCcc
Q psy2857 120 ECVDGLCYCRPGFDARGSVCVDVDECQLGDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCKDVRWEFNVTLLFYETDY 199 (332)
Q Consensus 120 ~c~~~~c~C~~g~~~~g~~c~~~~~C~~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~~~~c~~~~~c~~~~~~~ 199 (332)
.|.++|. +..|.+ +|.....|.+++.|. .+++.|.|++||.|..++..|.
T Consensus 232 -------~C~~g~~--g~~C~~--~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~~C~----------------- 281 (423)
T 2gy5_A 232 -------ACELHTF--GRTCKE--RCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCNEACH----------------- 281 (423)
T ss_dssp -------ECCTTEE--STTSCE--ECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGCBCCC-----------------
T ss_pred -------ccCCCCC--CCCcCc--cCCCCCCCCCCCEEC--CCCCeEEeCCCcccccccCccC-----------------
Confidence 1233343 334432 344345677778885 4678999999999865443221
Q ss_pred cccccCCcccccceecccccceecccccEEecccCccccccccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCc
Q psy2857 200 LHSVASDISDILTIIHEFSRIFSKHLKLFVIEDAKRNLNRVDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQA 278 (332)
Q Consensus 200 ~~~~~~~~~~~~c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~ 278 (332)
+ ||.+..|.. .| +|.+++.|.+.. .|.|++||+|..|+.
T Consensus 282 ----------------~----------G~~G~~C~~--------~C---~C~ngg~C~~~~---~C~C~~G~~G~~Ce~ 320 (423)
T 2gy5_A 282 ----------------P----------GFYGPDCKL--------RC---SCNNGEMCDRFQ---GCLCSPGWQGLQCER 320 (423)
T ss_dssp ----------------T----------TBCSBTTCC--------BC---CCTTCCEEETTT---EEECCTTCBSTTSCB
T ss_pred ----------------C----------CCcCCcccc--------cc---cCCCCCEecCCC---ceECCCCCcCCCCcc
Confidence 1 555443321 12 577888888764 399999999987763
No 47
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.08 E-value=2.5e-11 Score=91.52 Aligned_cols=81 Identities=28% Similarity=0.738 Sum_probs=30.6
Q ss_pred ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCC-c-ccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCC
Q psy2857 17 VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSD-I-DECKALDKPCGLRAICENTVPGFNCLCPKGYSGKP 94 (332)
Q Consensus 17 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~-~-~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~ 94 (332)
.++++|.+.||.++++|+++.++|.|.|++||+|.. |.+ + ++|...+.+|.+ .|+++.++|.|.|.+||.+..
T Consensus 40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~ 114 (134)
T 2vh0_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCc---cccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECC
Confidence 688999999999999999999999999999999864 444 5 788754456764 999999999999999999554
Q ss_pred CCccceeec
Q psy2857 95 DAKVACEQV 103 (332)
Q Consensus 95 ~~~~~c~~~ 103 (332)
.+. .|+.+
T Consensus 115 ~g~-~C~~~ 122 (134)
T 2vh0_B 115 NGK-ACIPT 122 (134)
T ss_dssp TSS-CEEES
T ss_pred CCC-ccCcC
Confidence 333 56554
No 48
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.03 E-value=2e-10 Score=87.49 Aligned_cols=82 Identities=26% Similarity=0.516 Sum_probs=62.8
Q ss_pred ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCC-cccccCCCCCCCCCC---ceeeCCC-CeeeeCCCCCC
Q psy2857 17 VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSD-IDECKALDKPCGLRA---ICENTVP-GFNCLCPKGYS 91 (332)
Q Consensus 17 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~-~~~c~~~~~~C~~~~---~C~~~~~-~~~C~C~~g~~ 91 (332)
.|+++|.+.||.++++|+++.++|.|.|++||+|..+ .+ ++++.. .++.+++ .|+++.+ +|.|.|.+||.
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C---~~~~~~c~~--c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~ 119 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNC---ETHKDDQLI--CVNENGGCEQYCSDHTGTKRSCRCHEGYS 119 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTS---CEEGGGCCS--TTTGGGGCSSEEECCTTSCCEEECCTTEE
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCcc---ccCcccccc--ccCCCCCccCEeECCCCCCEEEECCCCce
Confidence 6899999999999999999999999999999999654 43 455421 1232233 8999999 99999999999
Q ss_pred CCCCCccceeecc
Q psy2857 92 GKPDAKVACEQVD 104 (332)
Q Consensus 92 ~~~~~~~~c~~~~ 104 (332)
+...++ .|+.++
T Consensus 120 l~~dG~-~C~~~~ 131 (142)
T 2c4f_L 120 LLADGV-SCTPTV 131 (142)
T ss_dssp ECTTSS-CEEESS
T ss_pred ECCCCC-CCCCCC
Confidence 654433 565543
No 49
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.01 E-value=1.8e-10 Score=108.58 Aligned_cols=134 Identities=24% Similarity=0.625 Sum_probs=96.1
Q ss_pred EEEecCCceeccc---CC---------cCCCC----CCCCCCeeeeCCCCeEeeCC------CCCccCCCCCCCCccccc
Q psy2857 6 LVRILLGVRAIVD---IN---------ECQSN----PCGVNATCIDTQGSYSCVCK------EHYTGDPYQACSDIDECK 63 (332)
Q Consensus 6 ~c~c~~g~~~~~~---~~---------~C~~~----~C~~~g~C~~~~g~~~C~C~------~G~~g~~~~~C~~~~~c~ 63 (332)
.|.|.+||+|... ++ .|... +|.++|.|+.. .|.|. +||+|..++ .+.+.|.
T Consensus 447 ~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G----~C~C~~~~~~~~G~~G~~Ce--~~~~~C~ 520 (687)
T 3k6s_B 447 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCE--CDTINCE 520 (687)
T ss_dssp SEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETT----EEEECCCCSTTCCEESTTSC--EESSCSC
T ss_pred EeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCC----EEEcCCCCCCCCCccccccc--ccccccc
Confidence 4899999999932 22 47653 39999999953 79999 999998775 1344554
Q ss_pred CC-CCCCCC--CCceeeCCCCeeeeCCCCCCCCCCCccceeeccCCCCCCC--CccccCCCcccCceecCCCCccCCCCe
Q psy2857 64 AL-DKPCGL--RAICENTVPGFNCLCPKGYSGKPDAKVACEQVDVTSECSS--NFECVNNAECVDGLCYCRPGFDARGSV 138 (332)
Q Consensus 64 ~~-~~~C~~--~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~~~~~c~~--~~~C~~~~~c~~~~c~C~~g~~~~g~~ 138 (332)
.. ..+|.+ ++.|... .|.|.+||.|..+.. ......|.. ...|.+++.|..+.|.|.+||. |..
T Consensus 521 ~~~~~~C~~~~~G~C~~g----~C~C~~G~~G~~Cec-----~~~~~~C~~~~g~~Cs~~G~C~~g~C~C~~Gy~--G~~ 589 (687)
T 3k6s_B 521 RYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQC-----ERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQ--LPL 589 (687)
T ss_dssp EETTEETSHHHHEEEETT----EEEECTTCCSTTSCS-----CCSSCTTBCTTCSBTSSSCCBCSSCBCCSTTCC--TTT
T ss_pred CCCCcCcCCCCCCeEECC----EEEcCCCCcCCCCcc-----CCCCCCCCCCCCCCCCCCCcCCCCEEECCCCCc--CCC
Confidence 21 235887 8999853 899999999985541 100113443 2478889999999999999998 888
Q ss_pred eecCCCCCCCCCCCCCCcee
Q psy2857 139 CVDVDECQLGDPCGPQAQCT 158 (332)
Q Consensus 139 c~~~~~C~~~~~C~~~~~C~ 158 (332)
|..-..|. .+|.+++.|+
T Consensus 590 Ce~c~~C~--~~C~~~g~Cv 607 (687)
T 3k6s_B 590 CQECPGCP--SPCGKYISCA 607 (687)
T ss_dssp TCCCTTSC--CCCTTTHHHH
T ss_pred CCCCCCCC--cccCCCCCCC
Confidence 86544563 6788888887
No 50
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.95 E-value=9.1e-10 Score=103.84 Aligned_cols=144 Identities=21% Similarity=0.401 Sum_probs=104.8
Q ss_pred CccccCCCcccCceecCCCCccCCCCeee-cCC---------CCCC---CCCCCCCCceecCCCceEeeCC------CCC
Q psy2857 112 NFECVNNAECVDGLCYCRPGFDARGSVCV-DVD---------ECQL---GDPCGPQAQCTNTPGSFRCDCV------EGY 172 (332)
Q Consensus 112 ~~~C~~~~~c~~~~c~C~~g~~~~g~~c~-~~~---------~C~~---~~~C~~~~~C~~~~~~~~C~C~------~G~ 172 (332)
...|.+++.|..+.|.|.+||. |..|. ..+ .|.. ..+|.+++.|+.. .|.|+ +||
T Consensus 434 s~~Cs~~G~C~~g~C~C~~Gy~--G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G----~C~C~~~~~~~~G~ 507 (687)
T 3k6s_B 434 RSLCHGKGFLECGICRCDTGYI--GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLI 507 (687)
T ss_dssp SSTGGGSEEESSSSEEECSSEE--STTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETT----EEEECCCCSTTCCE
T ss_pred CCCCCCCCEEeCCEeEcCCCCc--CCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCC----EEEcCCCCCCCCCc
Confidence 3478888888889999999999 67764 222 4642 1358889999842 99999 999
Q ss_pred ccCCCC---ccccc---cCccc--ceeeccccCcccccccCCcccccceecccccceecccccEEecccCccccccccCc
Q psy2857 173 VGAPPR---IKCKD---VRWEF--NVTLLFYETDYLHSVASDISDILTIIHEFSRIFSKHLKLFVIEDAKRNLNRVDINE 244 (332)
Q Consensus 173 ~g~~~~---~~c~~---~~c~~--~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (332)
.|..++ ..|.. ..|.+ ++.|. ...|.|.+ ||++..|.. ..+++.
T Consensus 508 ~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~---------------~g~C~C~~----------G~~G~~Cec---~~~~~~ 559 (687)
T 3k6s_B 508 YGQYCECDTINCERYNGQVCGGPGRGLCF---------------CGKCRCHP----------GFEGSACQC---ERTTEG 559 (687)
T ss_dssp ESTTSCEESSCSCEETTEETSHHHHEEEE---------------TTEEEECT----------TCCSTTSCS---CCSSCT
T ss_pred cccccccccccccCCCCcCcCCCCCCeEE---------------CCEEEcCC----------CCcCCCCcc---CCCCCC
Confidence 999875 24542 23655 66665 34788988 999987751 123567
Q ss_pred cCCC---CCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeee
Q psy2857 245 CQSN---PCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICE 299 (332)
Q Consensus 245 C~~~---~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~ 299 (332)
|... +|.+++.|+. .+|.|++||+|..|+.| ..|. .+|.+++.|+
T Consensus 560 C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce~c---~~C~---~~C~~~g~Cv 607 (687)
T 3k6s_B 560 CLNPRRVECSGRGRCRC----NVCECHSGYQLPLCQEC---PGCP---SPCGKYISCA 607 (687)
T ss_dssp TBCTTCSBTSSSCCBCS----SCBCCSTTCCTTTTCCC---TTSC---CCCTTTHHHH
T ss_pred CCCCCCCCCCCCCcCCC----CEEECCCCCcCCCCCCC---CCCC---cccCCCCCCC
Confidence 7653 7999999987 38999999999987644 2453 5888888776
No 51
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.95 E-value=1.3e-10 Score=104.23 Aligned_cols=82 Identities=28% Similarity=0.710 Sum_probs=22.3
Q ss_pred ccCccCCCCCCCCCeeeecCCceeeecCCCcccCCC-CcccccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCCC
Q psy2857 241 DINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPY-QACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDA 319 (332)
Q Consensus 241 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~-~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~ 319 (332)
++++|..+++...+.|.+..++|+|.|++||++... ..|+|+|||. ...+|.+ .|+|+.++|.|.|++||+.....
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~-~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~ 78 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECA-EEGYCSQ--GCTNSEGAFQCWCEAGYELRPDR 78 (386)
T ss_dssp ---------------------------------------------------CCTT--EEC-----CCEECCTTEEECTTS
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeC-CcCcccC--cCCCCCCCCeEEECCCceEcCCC
Confidence 578898877666679999999999999999995542 4689999997 3468974 59999999999999999977665
Q ss_pred Ccccccc
Q psy2857 320 KVACEQE 326 (332)
Q Consensus 320 ~~~c~~~ 326 (332)
+ .|..+
T Consensus 79 ~-~C~~~ 84 (386)
T 3v65_B 79 R-SCKAL 84 (386)
T ss_dssp S-CEEEC
T ss_pred C-eECCc
Confidence 4 67654
No 52
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.94 E-value=5.4e-09 Score=100.60 Aligned_cols=81 Identities=33% Similarity=0.818 Sum_probs=64.3
Q ss_pred ccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCCCC
Q psy2857 241 DINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAK 320 (332)
Q Consensus 241 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~ 320 (332)
++++|........+.|+++.++|+|.|++||++.....|++||||.. ..+|. +.|+|+.++|.|.|++||++....+
T Consensus 293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~-~~~C~--~~C~n~~g~y~C~C~~G~~~~~~~~ 369 (699)
T 1n7d_A 293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-PDTCS--QLCVNLEGGYKCQCEEGFQLDPHTK 369 (699)
T ss_dssp CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSS-SSSCT--TTCCBCSSCBCCCCCSSCBCCSSCC
T ss_pred ccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCcccCccccCC-CCccc--cccccCCCCeeeeeecccccCCCCC
Confidence 45677654322246899999999999999999855567999999974 46785 5899999999999999999987665
Q ss_pred ccccc
Q psy2857 321 VACEQ 325 (332)
Q Consensus 321 ~~c~~ 325 (332)
+|..
T Consensus 370 -~C~~ 373 (699)
T 1n7d_A 370 -ACKA 373 (699)
T ss_dssp -CCBC
T ss_pred -cccc
Confidence 5754
No 53
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.94 E-value=9.5e-10 Score=106.67 Aligned_cols=80 Identities=34% Similarity=0.823 Sum_probs=62.6
Q ss_pred CccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCCCCcc
Q psy2857 243 NECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVA 322 (332)
Q Consensus 243 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~ 322 (332)
++|........+.|+++.++|+|.|++||.+.....|+|||||.. +.+|. +.|+|+.++|.|.|++||.+....+ .
T Consensus 313 ~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~-~~~C~--~~C~n~~gsy~C~C~~Gy~l~~~~~-~ 388 (791)
T 3m0c_C 313 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-PDTCS--QLCVNLEGGYKCQCEEGFQLDPHTK-A 388 (791)
T ss_dssp CSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEECCCCCSS-SSSCT--TTCCBCSSCBCCCCCSSEECCSSCC-C
T ss_pred ccccccccCccccccCCCCCcccCCCCCCccCCCCccccCcccCC-CCCCC--CeeecCCCCceeecCCCCEeCCCCc-e
Confidence 455433222235899999999999999998754567999999983 45774 6899999999999999999987655 6
Q ss_pred cccc
Q psy2857 323 CEQE 326 (332)
Q Consensus 323 c~~~ 326 (332)
|..+
T Consensus 389 C~~~ 392 (791)
T 3m0c_C 389 CKAV 392 (791)
T ss_dssp CEET
T ss_pred eeec
Confidence 7654
No 54
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.88 E-value=2.4e-09 Score=93.28 Aligned_cols=83 Identities=29% Similarity=0.648 Sum_probs=66.5
Q ss_pred ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCC-CCCCCCCCceeeCCCCeeeeCCCCCCCCCC
Q psy2857 17 VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKAL-DKPCGLRAICENTVPGFNCLCPKGYSGKPD 95 (332)
Q Consensus 17 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~-~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~ 95 (332)
.|+++|.++||.++++|++..++|.|.|++||+|..++ .++++|... ..+|.+ .|+++.++|.|.|.+||.+...
T Consensus 3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~--~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~~~ 78 (317)
T 3h5c_B 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCE--LAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLGED 78 (317)
T ss_dssp ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSC--CCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECCTT
T ss_pred ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccc--cCcccCCCCCCCCCcC--ccccCCCeeEEecccccccccc
Confidence 36889999999999999999999999999999996543 289999752 368975 9999999999999999998754
Q ss_pred Cccceeecc
Q psy2857 96 AKVACEQVD 104 (332)
Q Consensus 96 ~~~~c~~~~ 104 (332)
.+ .|...+
T Consensus 79 ~~-~C~~~~ 86 (317)
T 3h5c_B 79 HK-QCVPHD 86 (317)
T ss_dssp SS-CCEECS
T ss_pred cc-cccccc
Confidence 43 565543
No 55
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.78 E-value=3.7e-09 Score=98.30 Aligned_cols=74 Identities=26% Similarity=0.489 Sum_probs=23.7
Q ss_pred CccCCCCCCCCCeeeec----CCceeeecCCCcccCCCCccc--------ccccccCCCCCCCCCCeeecC--CCceeee
Q psy2857 243 NECQSNPCGVNATCIDT----QGSYSCVCKEHYTGDPYQACS--------DIDECKALDKPCGLRAICENT--VPGFNCL 308 (332)
Q Consensus 243 ~~C~~~~C~~~~~C~~~----~~~~~C~C~~G~~g~~~~~C~--------~~d~C~~~~~~C~~~~~C~~~--~g~~~C~ 308 (332)
+.|...+|..++.|.+. ..+++|.|++||+|..++.|. +++.|.. .+|.+++.+... ...++|.
T Consensus 436 ~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~--C~C~~~gs~~~~C~~~tG~C~ 513 (525)
T 4aqs_A 436 YGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRP--CDCDLGGALNNSCSEDSGQCS 513 (525)
T ss_dssp TSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC----------------------------------------
T ss_pred CCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcC--CCCCCCCccCCccCCCCCeeE
Confidence 44555555555555432 234589999999999887653 4566754 467766655433 2234899
Q ss_pred CCCCCCCCCC
Q psy2857 309 CPKGYSGKPD 318 (332)
Q Consensus 309 C~~g~~g~~~ 318 (332)
|++||+|..+
T Consensus 514 C~~G~~G~~C 523 (525)
T 4aqs_A 514 CLPHMIGRQC 523 (525)
T ss_dssp ----------
T ss_pred CCCCCcCCCC
Confidence 9999999843
No 56
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.75 E-value=6.8e-09 Score=93.37 Aligned_cols=78 Identities=35% Similarity=0.847 Sum_probs=64.9
Q ss_pred CcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccc
Q psy2857 20 NECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVA 99 (332)
Q Consensus 20 ~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~ 99 (332)
|+|...+|...+.|+++.++|.|.|++||.+.+...|+++++|.. +.+|.. .|+++.++|.|.|.+||.+....+ .
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~-~~~C~~--~C~n~~g~~~C~C~~g~~~~~~~~-~ 76 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-PDTCSQ--LCVNLEGGYKCQCEEGFQLDPHTK-A 76 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCST-TSSCSS--CCBCCSSSCBCCCCTTCCCCTTTS-S
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhc-cCCCCC--ccCCCccceeeecccccccccccc-c
Confidence 578888876678999999999999999999754467899999973 578864 899999999999999999875544 4
Q ss_pred ee
Q psy2857 100 CE 101 (332)
Q Consensus 100 c~ 101 (332)
|.
T Consensus 77 C~ 78 (400)
T 3p5b_L 77 CK 78 (400)
T ss_dssp CC
T ss_pred ee
Confidence 53
No 57
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.63 E-value=7e-09 Score=92.86 Aligned_cols=83 Identities=28% Similarity=0.720 Sum_probs=20.9
Q ss_pred ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC-CCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCC
Q psy2857 17 VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPY-QACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPD 95 (332)
Q Consensus 17 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~-~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~ 95 (332)
+|+|+|...++...+.|.+..++|.|.|++||+..+. ..|.++++|. .+.+|.+ .|+++.++|.|.|.+||.+...
T Consensus 1 ~~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~-~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d 77 (386)
T 3v65_B 1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECA-EEGYCSQ--GCTNSEGAFQCWCEAGYELRPD 77 (386)
T ss_dssp ----------------------------------------------------CCTT--EEC-----CCEECCTTEEECTT
T ss_pred CCcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeC-CcCcccC--cCCCCCCCCeEEECCCceEcCC
Confidence 3789999888655569999999999999999985432 5788999997 3578964 4999999999999999986654
Q ss_pred Cccceeec
Q psy2857 96 AKVACEQV 103 (332)
Q Consensus 96 ~~~~c~~~ 103 (332)
.+ .|+..
T Consensus 78 ~~-~C~~~ 84 (386)
T 3v65_B 78 RR-SCKAL 84 (386)
T ss_dssp SS-CEEEC
T ss_pred CC-eECCc
Confidence 43 56543
No 58
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.61 E-value=3.9e-08 Score=56.66 Aligned_cols=37 Identities=35% Similarity=0.792 Sum_probs=33.7
Q ss_pred ccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCC
Q psy2857 241 DINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 241 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~ 277 (332)
++++|.+.||.++++|++..++|+|.|++||+|..++
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 5789999999999999999999999999999998653
No 59
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.59 E-value=6.1e-08 Score=55.84 Aligned_cols=37 Identities=38% Similarity=0.807 Sum_probs=33.8
Q ss_pred ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCC
Q psy2857 17 VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPY 53 (332)
Q Consensus 17 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~ 53 (332)
+|+++|.+.||.++++|++..++|.|.|++||+|..+
T Consensus 1 ~d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~C 37 (39)
T 1edm_B 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNC 37 (39)
T ss_dssp CCCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTS
T ss_pred CccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCcc
Confidence 4789999999999999999999999999999999754
No 60
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.56 E-value=5.7e-08 Score=60.02 Aligned_cols=40 Identities=28% Similarity=0.591 Sum_probs=34.1
Q ss_pred cccccCccCCCCCCCCCee-----eecCCceeeecCCCcccCCCC
Q psy2857 238 NRVDINECQSNPCGVNATC-----IDTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 238 ~~~~~~~C~~~~C~~~~~C-----~~~~~~~~C~C~~G~~g~~~~ 277 (332)
..+++++|.++||.++++| ++..++|+|.|++||+|..++
T Consensus 4 c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE 48 (55)
T 3u7u_G 4 HLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ 48 (55)
T ss_dssp CEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred CcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence 4567899999999999999 466789999999999999876
No 61
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.40 E-value=1.9e-07 Score=57.61 Aligned_cols=41 Identities=27% Similarity=0.584 Sum_probs=34.1
Q ss_pred eecccCCcCCCCCCCCCCeee-----eCCCCeEeeCCCCCccCCCC
Q psy2857 14 RAIVDINECQSNPCGVNATCI-----DTQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 14 ~~~~~~~~C~~~~C~~~g~C~-----~~~g~~~C~C~~G~~g~~~~ 54 (332)
...+++|+|.++||.++|+|+ +..++|.|.|++||+|..++
T Consensus 3 ~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE 48 (55)
T 3u7u_G 3 SHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ 48 (55)
T ss_dssp CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred CCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence 344789999999999999994 56779999999999998765
No 62
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.37 E-value=1.2e-07 Score=59.84 Aligned_cols=45 Identities=31% Similarity=0.661 Sum_probs=37.1
Q ss_pred ccccCccCCCCCCCC--CeeeecCCceeeecCCCcc-cCCCCccccccccc
Q psy2857 239 RVDINECQSNPCGVN--ATCIDTQGSYSCVCKEHYT-GDPYQACSDIDECK 286 (332)
Q Consensus 239 ~~~~~~C~~~~C~~~--~~C~~~~~~~~C~C~~G~~-g~~~~~C~~~d~C~ 286 (332)
+.++|+|.++||.++ ++|++..++|.|.|++||+ |..+ ++.++|.
T Consensus 8 ~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C---~~~~~C~ 55 (61)
T 2k2s_B 8 SETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDG---TGNVTCI 55 (61)
T ss_dssp TTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECS---SSCEEEE
T ss_pred cCCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCC---CCCCEec
Confidence 456789999999998 8999999999999999999 8754 3445553
No 63
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.25 E-value=1.2e-06 Score=54.04 Aligned_cols=37 Identities=32% Similarity=0.723 Sum_probs=32.7
Q ss_pred ccCccCCC---CCCCCCeee--ecCCceeeecCCCcccCCCC
Q psy2857 241 DINECQSN---PCGVNATCI--DTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 241 ~~~~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~ 277 (332)
++++|.+. ||.++++|+ +..++|+|.|++||+|..++
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCC
Confidence 56788876 999999999 78899999999999998765
No 64
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.24 E-value=1.3e-06 Score=84.09 Aligned_cols=81 Identities=33% Similarity=0.818 Sum_probs=61.9
Q ss_pred cCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCCCc
Q psy2857 18 DINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAK 97 (332)
Q Consensus 18 ~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~ 97 (332)
++++|...+..-.+.|+++.++|.|.|++||.+.....|+++++|.. +.+|+ ..|+++.++|.|.|.+||.+....+
T Consensus 293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~-~~~C~--~~C~n~~g~y~C~C~~G~~~~~~~~ 369 (699)
T 1n7d_A 293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQD-PDTCS--QLCVNLEGGYKCQCEEGFQLDPHTK 369 (699)
T ss_dssp CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSS-SSSCT--TTCCBCSSCBCCCCCSSCBCCSSCC
T ss_pred ccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCcccCccccCC-CCccc--cccccCCCCeeeeeecccccCCCCC
Confidence 45566554311235899999999999999999754577999999973 56785 5999999999999999999865544
Q ss_pred cceee
Q psy2857 98 VACEQ 102 (332)
Q Consensus 98 ~~c~~ 102 (332)
.|..
T Consensus 370 -~C~~ 373 (699)
T 1n7d_A 370 -ACKA 373 (699)
T ss_dssp -CCBC
T ss_pred -cccc
Confidence 4543
No 65
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.24 E-value=3e-06 Score=65.70 Aligned_cols=57 Identities=26% Similarity=0.628 Sum_probs=35.9
Q ss_pred eee-cCCCcccCCCCcccc-----------cccccCCCCCCCCCC------eeecCCCceeeeCCCCCCCCCCCCccccc
Q psy2857 264 SCV-CKEHYTGDPYQACSD-----------IDECKALDKPCGLRA------ICENTVPGFNCLCPKGYSGKPDAKVACEQ 325 (332)
Q Consensus 264 ~C~-C~~G~~g~~~~~C~~-----------~d~C~~~~~~C~~~~------~C~~~~g~~~C~C~~g~~g~~~~~~~c~~ 325 (332)
+|+ |+++|+|..++.|.. .+.|.. -.|.+.+ .|....| +|.|++||+|....+ |.+
T Consensus 76 ~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~--C~C~~~Gs~~~~~~Cd~~tG--~C~C~~g~~G~~Cd~--C~~ 149 (162)
T 1klo_A 76 ECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKA--CACNPYGTVQQQSSCNPVTG--QCQCLPHVSGRDCGT--CDP 149 (162)
T ss_dssp CBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEE--CCCCTTTBGGGCCCCCTTTC--CCCBCTTEESTTCCE--ECT
T ss_pred cccCCCCCCcCCCcCcCchhhcCCccccCCCCCCee--ccCCCCCccCCCCCCCCCCC--EeECCCCCcCCCCCC--CCC
Confidence 674 777777776655532 223332 2455543 6765555 899999999998765 665
Q ss_pred c
Q psy2857 326 E 326 (332)
Q Consensus 326 ~ 326 (332)
.
T Consensus 150 g 150 (162)
T 1klo_A 150 G 150 (162)
T ss_dssp T
T ss_pred C
Confidence 3
No 66
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.24 E-value=6.3e-07 Score=87.00 Aligned_cols=70 Identities=33% Similarity=0.823 Sum_probs=56.9
Q ss_pred CeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCCCCCccceeecc
Q psy2857 31 ATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQVD 104 (332)
Q Consensus 31 g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~~~~~~~c~~~~ 104 (332)
+.|+++.++|.|.|++||.+.....|.++++|. .+.+|+ ..|+++.++|.|.|.+||.+....+ .|..++
T Consensus 324 ~~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~-~~~~C~--~~C~n~~gsy~C~C~~Gy~l~~~~~-~C~~~~ 393 (791)
T 3m0c_C 324 HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQ-DPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTK-ACKAVG 393 (791)
T ss_dssp SEEEECSBSEEEECCTTCEEETTTEEECCCCCS-SSSSCT--TTCCBCSSCBCCCCCSSEECCSSCC-CCEETT
T ss_pred ccccCCCCCcccCCCCCCccCCCCccccCcccC-CCCCCC--CeeecCCCCceeecCCCCEeCCCCc-eeeecc
Confidence 489999999999999999864446788999997 356774 5899999999999999998865544 565543
No 67
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.21 E-value=3.6e-07 Score=57.74 Aligned_cols=39 Identities=28% Similarity=0.768 Sum_probs=34.1
Q ss_pred cccccccccCCCCCCCCC--CeeecCCCceeeeCCCCCC-CCCC
Q psy2857 278 ACSDIDECKALDKPCGLR--AICENTVPGFNCLCPKGYS-GKPD 318 (332)
Q Consensus 278 ~C~~~d~C~~~~~~C~~~--~~C~~~~g~~~C~C~~g~~-g~~~ 318 (332)
.+.++|+|.. .||.++ ++|++..++|.|.|++||+ |..+
T Consensus 7 ~~~~~d~C~s--nPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C 48 (61)
T 2k2s_B 7 LSETPAACSS--NPCGPEAAGTCKETNSGYICRCNQGYRISLDG 48 (61)
T ss_dssp CTTSCCHHHH--CSSCSSSCCEEEECSSEEEEECCTTEEEEECS
T ss_pred hcCCCCcCcC--CCCcCCCccccccCCCceEeECCCCCccCCCC
Confidence 4678899985 689988 8999999999999999999 8754
No 68
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.16 E-value=1.8e-06 Score=51.23 Aligned_cols=34 Identities=29% Similarity=0.569 Sum_probs=29.0
Q ss_pred ccCCC---CCCCCCeee--ecCCceeeecCCCcccCCCC
Q psy2857 244 ECQSN---PCGVNATCI--DTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 244 ~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~ 277 (332)
+|.+. ||.++++|+ +..++|+|.|++||+|..++
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 40 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence 45555 999999998 67789999999999998765
No 69
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.16 E-value=1.6e-06 Score=53.54 Aligned_cols=42 Identities=36% Similarity=0.882 Sum_probs=34.2
Q ss_pred cccccccCC--------CCCCCCCCeeecCCCceeeeCCCCCCCCCCCCcccc
Q psy2857 280 SDIDECKAL--------DKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACE 324 (332)
Q Consensus 280 ~~~d~C~~~--------~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~c~ 324 (332)
+|||+|... ..+|. ++|+|+.|+|.|.|++||++....+ .|.
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~d~~-~C~ 51 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQEDRH-SCQ 51 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECTTSS-CEE
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECCCCC-ccC
Confidence 578999764 26785 5999999999999999999987655 564
No 70
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.15 E-value=2.2e-06 Score=52.79 Aligned_cols=37 Identities=32% Similarity=0.723 Sum_probs=32.8
Q ss_pred cCCcCCCC---CCCCCCeee--eCCCCeEeeCCCCCccCCCC
Q psy2857 18 DINECQSN---PCGVNATCI--DTQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 18 ~~~~C~~~---~C~~~g~C~--~~~g~~~C~C~~G~~g~~~~ 54 (332)
+|++|.+. ||.++|+|+ +..++|.|.|++||+|..++
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCC
Confidence 67899987 999999999 77899999999999997654
No 71
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.14 E-value=9.9e-07 Score=56.63 Aligned_cols=43 Identities=19% Similarity=0.412 Sum_probs=36.0
Q ss_pred CccCCCCCCCCCeeee-----cCCceeeecCCCcccCCCCcccccccccC
Q psy2857 243 NECQSNPCGVNATCID-----TQGSYSCVCKEHYTGDPYQACSDIDECKA 287 (332)
Q Consensus 243 ~~C~~~~C~~~~~C~~-----~~~~~~C~C~~G~~g~~~~~C~~~d~C~~ 287 (332)
++|.++||.++++|++ ..++|+|.|++||+|..++ .++|++..
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce--~~i~~~~~ 54 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT--ENVPMKVQ 54 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC--EECCSSCT
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC--cCcCcccc
Confidence 5788899999999997 5679999999999999776 56777753
No 72
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=98.14 E-value=1.2e-06 Score=57.50 Aligned_cols=37 Identities=27% Similarity=0.569 Sum_probs=29.5
Q ss_pred cccccccCCCCCCCCCCeeecCCCceeee-CCCCCCCC
Q psy2857 280 SDIDECKALDKPCGLRAICENTVPGFNCL-CPKGYSGK 316 (332)
Q Consensus 280 ~~~d~C~~~~~~C~~~~~C~~~~g~~~C~-C~~g~~g~ 316 (332)
+|||||....++|.++++|+|+.|+|+|. +..||+++
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 47999988778999888999999999998 33344443
No 73
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.06 E-value=1.7e-06 Score=70.16 Aligned_cols=62 Identities=21% Similarity=0.409 Sum_probs=44.5
Q ss_pred CCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCC--------cccccCC--CCCCCCCCceeeCCCCeeeeCCCC-----
Q psy2857 25 NPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSD--------IDECKAL--DKPCGLRAICENTVPGFNCLCPKG----- 89 (332)
Q Consensus 25 ~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~--------~~~c~~~--~~~C~~~~~C~~~~~~~~C~C~~g----- 89 (332)
..|+.+|+|+. ..|.|.+||+|..++ |.. ...|... ..+|++++.|+.. .|.|.+|
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G~~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g----~C~C~~gw~~~~ 166 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGK 166 (217)
T ss_dssp CTTTTSEEEET----TEEEECTTEESTTSC-EECCCCC-GGGGGGGBSSTTSCBGGGTEEEETT----EEEECCCCSTTC
T ss_pred CccCCCceEEC----CEEECCCCccCCccc-ccCcccccccCCCcCCCCCCCCCCCCCCEEeCC----ceECCCCCCCcc
Confidence 34999999986 379999999998875 211 1235421 3578889999853 8999999
Q ss_pred -CCCCCC
Q psy2857 90 -YSGKPD 95 (332)
Q Consensus 90 -~~~~~~ 95 (332)
|+|..+
T Consensus 167 ~~~G~~C 173 (217)
T 2p28_B 167 LIYGQYC 173 (217)
T ss_dssp CEESTTS
T ss_pred cEECCCc
Confidence 577633
No 74
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.05 E-value=3e-06 Score=52.63 Aligned_cols=43 Identities=26% Similarity=0.520 Sum_probs=33.1
Q ss_pred CccCC--CCCCCCCeeeecCCceeeecCCCcccCCC-CcccccccccC
Q psy2857 243 NECQS--NPCGVNATCIDTQGSYSCVCKEHYTGDPY-QACSDIDECKA 287 (332)
Q Consensus 243 ~~C~~--~~C~~~~~C~~~~~~~~C~C~~G~~g~~~-~~C~~~d~C~~ 287 (332)
|||.. .+|. +.|+|++++|+|.|++||.+... .+|.++|+|.-
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~c 47 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 47 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEEESSSSCT
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccCccccC
Confidence 45653 3453 58999999999999999986543 57999998843
No 75
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.03 E-value=5.7e-06 Score=64.11 Aligned_cols=28 Identities=32% Similarity=0.656 Sum_probs=22.3
Q ss_pred CCCCCCceeeCC--CCeee-eCCCCCCCCCC
Q psy2857 68 PCGLRAICENTV--PGFNC-LCPKGYSGKPD 95 (332)
Q Consensus 68 ~C~~~~~C~~~~--~~~~C-~C~~g~~~~~~ 95 (332)
+|.++++|+... +.+.| .|..+|.|..+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~C 32 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRC 32 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTS
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCC
Confidence 477789998765 56899 79999999844
No 76
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.03 E-value=3.2e-06 Score=50.18 Aligned_cols=36 Identities=31% Similarity=0.587 Sum_probs=30.2
Q ss_pred ccCccCC---CCCCCCCeeeecC--CceeeecCCCcccCCCC
Q psy2857 241 DINECQS---NPCGVNATCIDTQ--GSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 241 ~~~~C~~---~~C~~~~~C~~~~--~~~~C~C~~G~~g~~~~ 277 (332)
++++|.+ +||.+ ++|++.. ++|.|.|++||+|..++
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE 42 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence 4677877 89988 8999755 68999999999999765
No 77
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.01 E-value=2.1e-06 Score=53.31 Aligned_cols=44 Identities=23% Similarity=0.545 Sum_probs=35.9
Q ss_pred ccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCCCCccccccccC
Q psy2857 283 DECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQEKAG 329 (332)
Q Consensus 283 d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~c~~~~~~ 329 (332)
|||....+.|. +.|+|+.|+|+|.|++||+...+.+ +|.++++.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~-~C~didec 45 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGK-ACIPTGPY 45 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSS-CEEESSSS
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCC-eeccCccc
Confidence 67776556785 5899999999999999999887765 78877663
No 78
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.96 E-value=3.4e-06 Score=54.89 Aligned_cols=46 Identities=24% Similarity=0.483 Sum_probs=38.9
Q ss_pred cccccccCCCCCCCCCCeeecCCC-ceeeeCCCCCCCCCCCCcccccccc
Q psy2857 280 SDIDECKALDKPCGLRAICENTVP-GFNCLCPKGYSGKPDAKVACEQEKA 328 (332)
Q Consensus 280 ~~~d~C~~~~~~C~~~~~C~~~~g-~~~C~C~~g~~g~~~~~~~c~~~~~ 328 (332)
.|+|+|....+.|. ..|+++.+ +|.|.|++||....+.+ +|.++++
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~-tC~d~de 49 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTVE 49 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSS-CEEECSS
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCC-cccCccc
Confidence 57899987667785 68999999 89999999999988776 7887765
No 79
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=97.95 E-value=2.1e-05 Score=73.10 Aligned_cols=37 Identities=22% Similarity=0.588 Sum_probs=0.0
Q ss_pred ccCccCCCCCCCCCeeeec--CCceeeecCCCcccCCCC
Q psy2857 241 DINECQSNPCGVNATCIDT--QGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 241 ~~~~C~~~~C~~~~~C~~~--~~~~~C~C~~G~~g~~~~ 277 (332)
+++.|.+.+|.+++.+.+. ...++|.|++||+|..|+
T Consensus 486 ~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 486 DLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp ---------------------------------------
T ss_pred CCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence 4456777777777665543 234589999999998654
No 80
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.93 E-value=7.5e-06 Score=53.23 Aligned_cols=48 Identities=27% Similarity=0.432 Sum_probs=36.6
Q ss_pred cccCccCCCCCCCCCeeeecCC-ceeeecCCCcccCC-CCcccccccccC
Q psy2857 240 VDINECQSNPCGVNATCIDTQG-SYSCVCKEHYTGDP-YQACSDIDECKA 287 (332)
Q Consensus 240 ~~~~~C~~~~C~~~~~C~~~~~-~~~C~C~~G~~g~~-~~~C~~~d~C~~ 287 (332)
+|+++|....-.....|+++.+ +|+|.|++||.+.. ..+|.++|+|.-
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~C 52 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC 52 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSCT
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCcccccC
Confidence 4678886533223468999999 89999999998764 367999998843
No 81
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.93 E-value=1.2e-05 Score=65.13 Aligned_cols=99 Identities=17% Similarity=0.342 Sum_probs=68.3
Q ss_pred CcccceeeccccCcccccccCCcccccceecccccceecccccEEecccCccccccc----cCccC----CCCCCCCCee
Q psy2857 185 RWEFNVTLLFYETDYLHSVASDISDILTIIHEFSRIFSKHLKLFVIEDAKRNLNRVD----INECQ----SNPCGVNATC 256 (332)
Q Consensus 185 ~c~~~~~c~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~C~----~~~C~~~~~C 256 (332)
.|+.+++|. ...|.|.+ ||++..|.-...... ...|. ..+|.++++|
T Consensus 97 ~Csg~G~C~---------------~g~C~C~~----------G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C 151 (217)
T 2p28_B 97 LCHGKGFLE---------------CGICRCDT----------GYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDC 151 (217)
T ss_dssp TTTTSEEEE---------------TTEEEECT----------TEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEE
T ss_pred ccCCCceEE---------------CCEEECCC----------CccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEE
Confidence 466667765 36788888 999988752211000 12354 3579899999
Q ss_pred eecCCceeeecCCC------cccCCCCcccccccccCC-CCCCCCC--CeeecCCCceeeeCCCCCCCCCC
Q psy2857 257 IDTQGSYSCVCKEH------YTGDPYQACSDIDECKAL-DKPCGLR--AICENTVPGFNCLCPKGYSGKPD 318 (332)
Q Consensus 257 ~~~~~~~~C~C~~G------~~g~~~~~C~~~d~C~~~-~~~C~~~--~~C~~~~g~~~C~C~~g~~g~~~ 318 (332)
+.. +|.|.+| |+|..++ .+++.|... ..+|.++ |+|+. + .|.|.+||+|..+
T Consensus 152 ~~g----~C~C~~gw~~~~~~~G~~Ce--~~~~~C~~~~g~~C~~~~~G~C~~--g--~C~C~~G~~G~~C 212 (217)
T 2p28_B 152 VCG----QCLCHTSDVPGKLIYGQYCE--CDTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGFEGSAC 212 (217)
T ss_dssp ETT----EEEECCCCSTTCCEESTTSC--EESSCSCEETTEETTCTTTEEEET--T--EEEECTTEESTTS
T ss_pred eCC----ceECCCCCCCcccEECCCcc--cCCccCCCCCCCCCCCCCCcEEeC--C--eeECCCCCccCCc
Confidence 852 8999999 6888765 245677542 1268877 99985 2 8999999999854
No 82
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.92 E-value=6.3e-06 Score=48.89 Aligned_cols=36 Identities=31% Similarity=0.587 Sum_probs=30.5
Q ss_pred cCCcCCC---CCCCCCCeeeeCC--CCeEeeCCCCCccCCCC
Q psy2857 18 DINECQS---NPCGVNATCIDTQ--GSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 18 ~~~~C~~---~~C~~~g~C~~~~--g~~~C~C~~G~~g~~~~ 54 (332)
++++|.+ +||.+ |+|++.. ++|.|.|++||+|..++
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE 42 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence 5788988 89987 8999854 68999999999997654
No 83
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.87 E-value=1.3e-05 Score=47.44 Aligned_cols=35 Identities=29% Similarity=0.544 Sum_probs=29.5
Q ss_pred CcCCCC---CCCCCCeee--eCCCCeEeeCCCCCccCCCC
Q psy2857 20 NECQSN---PCGVNATCI--DTQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 20 ~~C~~~---~C~~~g~C~--~~~g~~~C~C~~G~~g~~~~ 54 (332)
++|.+. ||.++|+|+ +..++|.|.|++||+|..++
T Consensus 1 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 40 (45)
T 1a3p_A 1 PGXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40 (45)
T ss_dssp CCCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred CCcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence 367777 999999998 67789999999999997654
No 84
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.84 E-value=4.2e-05 Score=52.74 Aligned_cols=71 Identities=21% Similarity=0.387 Sum_probs=58.5
Q ss_pred CccCCCCCCCCCeeee-cCCceeeecCCCcccCCCCccccccc-ccCCCCCCCCCCeeecCC-CceeeeCCCCCC
Q psy2857 243 NECQSNPCGVNATCID-TQGSYSCVCKEHYTGDPYQACSDIDE-CKALDKPCGLRAICENTV-PGFNCLCPKGYS 314 (332)
Q Consensus 243 ~~C~~~~C~~~~~C~~-~~~~~~C~C~~G~~g~~~~~C~~~d~-C~~~~~~C~~~~~C~~~~-g~~~C~C~~g~~ 314 (332)
+.|....|..++.|+. .++...|+|..||.++.. .|..+++ |......|..++.|+.+. ..-.|.|.++|.
T Consensus 11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~-~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGG-KCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp TSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSS-SEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred cEecCCCCCCCCCeEECCCCCEeEEEECCeeccCC-EEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 3566667888999988 778889999999999864 4877788 877777899999999875 667999999863
No 85
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.81 E-value=2.4e-06 Score=52.35 Aligned_cols=39 Identities=26% Similarity=0.581 Sum_probs=32.0
Q ss_pred eeeecCCCcccCCCCcccccccccCCCCCCCCCCeeec----CCCceeeeCCCCCCCCC
Q psy2857 263 YSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICEN----TVPGFNCLCPKGYSGKP 317 (332)
Q Consensus 263 ~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~----~~g~~~C~C~~g~~g~~ 317 (332)
+.|.|++||+ ..+|.++++|++ ..++|.|.|++||+|..
T Consensus 3 ~~C~C~~g~~----------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~ 45 (52)
T 3ca7_A 3 PTYKCPETFD----------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQR 45 (52)
T ss_dssp CCBCCCHHHH----------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTT
T ss_pred eeeECCCCCc----------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCC
Confidence 3688999986 147888999986 35689999999999984
No 86
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.79 E-value=1.5e-05 Score=52.27 Aligned_cols=35 Identities=31% Similarity=0.715 Sum_probs=28.3
Q ss_pred ccCccCC--CCCCCCCeeeecCCceeee-cCCCcccCC
Q psy2857 241 DINECQS--NPCGVNATCIDTQGSYSCV-CKEHYTGDP 275 (332)
Q Consensus 241 ~~~~C~~--~~C~~~~~C~~~~~~~~C~-C~~G~~g~~ 275 (332)
+||||.. .+|..+++|+|+.++|+|. +..||.+..
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~ 39 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDL 39 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccc
Confidence 6789975 5788888999999999997 556787654
No 87
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=97.77 E-value=2.2e-05 Score=53.85 Aligned_cols=69 Identities=23% Similarity=0.546 Sum_probs=55.8
Q ss_pred cCCCCCCCCCeeee-cCCceeeecCCCcccCCCCccccc--ccccCCCCCCCCCCeeecCC-----CceeeeCCCCCC
Q psy2857 245 CQSNPCGVNATCID-TQGSYSCVCKEHYTGDPYQACSDI--DECKALDKPCGLRAICENTV-----PGFNCLCPKGYS 314 (332)
Q Consensus 245 C~~~~C~~~~~C~~-~~~~~~C~C~~G~~g~~~~~C~~~--d~C~~~~~~C~~~~~C~~~~-----g~~~C~C~~g~~ 314 (332)
|....|..++.|.. ..+...|+|.+||.++.. .|..+ +.|+.....|..++.|+... +...|.|.+||.
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~-~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEGD-KCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEETT-EEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCCC-eEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 55567788999987 577889999999999864 47766 58887767899999998775 567999999974
No 88
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.73 E-value=9.2e-06 Score=52.03 Aligned_cols=42 Identities=19% Similarity=0.428 Sum_probs=33.4
Q ss_pred CCcCCCCCCCCCCeeee-----CCCCeEeeCCCCCccCCCCCCCCcccc
Q psy2857 19 INECQSNPCGVNATCID-----TQGSYSCVCKEHYTGDPYQACSDIDEC 62 (332)
Q Consensus 19 ~~~C~~~~C~~~g~C~~-----~~g~~~C~C~~G~~g~~~~~C~~~~~c 62 (332)
.++|.++||.++|+|++ ..++|.|.|++||+|..++ .+++++
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce--~~i~~~ 52 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT--ENVPMK 52 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC--EECCSS
T ss_pred cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC--cCcCcc
Confidence 36788889999999997 5689999999999997654 244444
No 89
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.72 E-value=3.1e-05 Score=47.63 Aligned_cols=33 Identities=33% Similarity=0.815 Sum_probs=27.4
Q ss_pred ccCccCC----------CCCCCCCeeeecCCceeeecCCCcccCC
Q psy2857 241 DINECQS----------NPCGVNATCIDTQGSYSCVCKEHYTGDP 275 (332)
Q Consensus 241 ~~~~C~~----------~~C~~~~~C~~~~~~~~C~C~~G~~g~~ 275 (332)
+||+|.. .+|. +.|+++.++|+|.|++||++..
T Consensus 3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred ccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence 6778864 4574 5999999999999999999864
No 90
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.60 E-value=1.9e-05 Score=48.08 Aligned_cols=38 Identities=24% Similarity=0.597 Sum_probs=31.1
Q ss_pred CCCCCCCCCeeecCCCceeeeCCCCCCCCCCCCcccccccc
Q psy2857 288 LDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQEKA 328 (332)
Q Consensus 288 ~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~c~~~~~ 328 (332)
..+.|. +.|+|+.|+|+|.|++||+...+.+ +|.++++
T Consensus 4 ~ng~C~--~~C~n~~gs~~C~C~~Gy~L~~d~~-tC~dide 41 (51)
T 1kig_L 4 DNGGCD--QFCREERSEVRCSCAHGYVLGDDSK-SCVSTER 41 (51)
T ss_dssp TTTSSS--SCCCEETTEECCCCCTTEEECTTSS-CEEECSS
T ss_pred CCCCcC--CEeEcCCCCeEEeCCCCcEECCCCC-ccccCCc
Confidence 345674 4799999999999999999887766 7887766
No 91
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.59 E-value=3.8e-05 Score=46.68 Aligned_cols=32 Identities=16% Similarity=0.489 Sum_probs=27.4
Q ss_pred CeeeecCCceeeecCCCcccCC-CCcccccccc
Q psy2857 254 ATCIDTQGSYSCVCKEHYTGDP-YQACSDIDEC 285 (332)
Q Consensus 254 ~~C~~~~~~~~C~C~~G~~g~~-~~~C~~~d~C 285 (332)
+.|+++.++|+|.|++||.+.. ..+|.++|++
T Consensus 10 ~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 10 QFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp SCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 4799999999999999998754 3679999987
No 92
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.58 E-value=7.4e-06 Score=50.14 Aligned_cols=40 Identities=20% Similarity=0.362 Sum_probs=32.4
Q ss_pred EEEecCCceecccCCcCCCCCCCCCCeeee----CCCCeEeeCCCCCccCCCC
Q psy2857 6 LVRILLGVRAIVDINECQSNPCGVNATCID----TQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 6 ~c~c~~g~~~~~~~~~C~~~~C~~~g~C~~----~~g~~~C~C~~G~~g~~~~ 54 (332)
.|.|++||. ++||.++|+|++ ..++|.|.|++||+|..++
T Consensus 4 ~C~C~~g~~---------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 4 TYKCPETFD---------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp CBCCCHHHH---------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred eeECCCCCc---------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 477888887 457888999997 3568999999999997654
No 93
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.55 E-value=1.3e-05 Score=72.93 Aligned_cols=62 Identities=31% Similarity=0.753 Sum_probs=25.4
Q ss_pred CccCCCCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCCC
Q psy2857 243 NECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDA 319 (332)
Q Consensus 243 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~ 319 (332)
++|.. +|.+ +.|++. ++|.|++||+|..|+ +++|.. +|.++++|++. +.|.|++||+|..+.
T Consensus 393 ~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C~----~~~C~~---~C~~~g~C~~~---~~C~C~~G~~G~~C~ 454 (463)
T 2wg3_C 393 SECSR-LCRN-GYCTPT---GKCCCSPGWEGDFCR----TAKCEP---ACRHGGVCVRP---NKCLCKKGYLGPQCE 454 (463)
T ss_dssp CHHHH-HCCS-EEECTT---SCEEECTTEESTTSC----EECC----------------------------------
T ss_pred ccccC-CCCC-CccCCC---CeECCCCCcCCCcCC----cCcCCC---CCCCCCEECCC---CEEECCCCcccCCCC
Confidence 45653 5775 789864 389999999998764 577864 89999999875 599999999998543
No 94
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.45 E-value=3.9e-05 Score=63.95 Aligned_cols=45 Identities=27% Similarity=0.660 Sum_probs=35.8
Q ss_pred cccCccCC--CCCCCCCeeeecCCceeeecCCCcccCCCCcccccccc
Q psy2857 240 VDINECQS--NPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDEC 285 (332)
Q Consensus 240 ~~~~~C~~--~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C 285 (332)
.|+|||.. .+|..++.|+|+.++|.|.|++||.|++. .|.|+|+.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~-~C~d~d~P 49 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR-QCVAEGSP 49 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS-SEEETTCE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC-cCCCCCCC
Confidence 36789973 78999999999999999999999998865 58888764
No 95
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.42 E-value=0.00011 Score=45.05 Aligned_cols=33 Identities=30% Similarity=0.528 Sum_probs=28.0
Q ss_pred CeeeecCC-ceeeecCCCcccCCC-Cccccccccc
Q psy2857 254 ATCIDTQG-SYSCVCKEHYTGDPY-QACSDIDECK 286 (332)
Q Consensus 254 ~~C~~~~~-~~~C~C~~G~~g~~~-~~C~~~d~C~ 286 (332)
+.|+++.+ +|+|.|++||.+... .+|.|+|+|.
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 57999999 799999999987643 6799999984
No 96
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.40 E-value=8.5e-05 Score=45.45 Aligned_cols=31 Identities=26% Similarity=0.688 Sum_probs=27.3
Q ss_pred CCCCCCCCeee--ecCCceeeecCCCcccCCCC
Q psy2857 247 SNPCGVNATCI--DTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 247 ~~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~ 277 (332)
++||.++++|+ +..++|.|.|++||+|..++
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence 47899999998 67789999999999999775
No 97
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.37 E-value=2.2e-05 Score=71.50 Aligned_cols=73 Identities=29% Similarity=0.649 Sum_probs=33.8
Q ss_pred EEecCCceec-ccCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeee
Q psy2857 7 VRILLGVRAI-VDINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCL 85 (332)
Q Consensus 7 c~c~~g~~~~-~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~ 85 (332)
..|..+|.+. ..+++|.. +|. ||+|++. +.|.|.+||+|..|+ ++.|.. +|.++++|++. +.|.
T Consensus 379 ~~C~~~~~g~~c~~~~C~~-~C~-nG~C~~~---~~C~C~~G~~G~~C~----~~~C~~---~C~~~g~C~~~---~~C~ 443 (463)
T 2wg3_C 379 EECRATVQPAQTLTSECSR-LCR-NGYCTPT---GKCCCSPGWEGDFCR----TAKCEP---ACRHGGVCVRP---NKCL 443 (463)
T ss_dssp GGGCCCCCCCCCCCCHHHH-HCC-SEEECTT---SCEEECTTEESTTSC----EECC-----------------------
T ss_pred ccCCCCCcCCCCccccccC-CCC-CCccCCC---CeECCCCCcCCCcCC----cCcCCC---CCCCCCEECCC---CEEE
Confidence 3577788776 34566654 587 4899864 379999999997653 567752 89999999876 5899
Q ss_pred CCCCCCCCC
Q psy2857 86 CPKGYSGKP 94 (332)
Q Consensus 86 C~~g~~~~~ 94 (332)
|.+||.|..
T Consensus 444 C~~G~~G~~ 452 (463)
T 2wg3_C 444 CKKGYLGPQ 452 (463)
T ss_dssp ---------
T ss_pred CCCCcccCC
Confidence 999999983
No 98
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.29 E-value=0.00011 Score=44.98 Aligned_cols=38 Identities=24% Similarity=0.520 Sum_probs=30.9
Q ss_pred CCCCCCCCeeecCCC-ceeeeCCCCCCCCCCCCccccccccC
Q psy2857 289 DKPCGLRAICENTVP-GFNCLCPKGYSGKPDAKVACEQEKAG 329 (332)
Q Consensus 289 ~~~C~~~~~C~~~~g-~~~C~C~~g~~g~~~~~~~c~~~~~~ 329 (332)
.+.|. ..|+|+.+ +|+|.|++||....+.+ +|.++++.
T Consensus 6 nggC~--~~C~n~~ggs~~C~C~~Gy~L~~Dg~-tC~d~dec 44 (53)
T 2bz6_L 6 NGGCE--QYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTVEY 44 (53)
T ss_dssp GGGCS--SEEEEETTTEEEEECCTTEEECTTSS-CEEECSSS
T ss_pred CCCcC--CEeEcCCCCCEEeeCCCCCEECCCCC-cccCCccc
Confidence 34564 58999999 79999999999888776 79887763
No 99
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.27 E-value=0.00011 Score=56.85 Aligned_cols=41 Identities=27% Similarity=0.787 Sum_probs=34.1
Q ss_pred CccCCCCCCCCCeeeecCCceeeecCCCcccCCCCccccccccc
Q psy2857 243 NECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECK 286 (332)
Q Consensus 243 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~ 286 (332)
++|...+|.++++|++..++|+|.|++||.|.. |+++++|.
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~---Ce~~~~c~ 160 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE---CEYVRDDD 160 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEESTT---SCEECC--
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcc---cccCcccC
Confidence 467778899999999999999999999999984 56777885
No 100
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.15 E-value=7.1e-05 Score=62.40 Aligned_cols=45 Identities=27% Similarity=0.677 Sum_probs=34.4
Q ss_pred ccCCcCC--CCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCcccc
Q psy2857 17 VDINECQ--SNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDEC 62 (332)
Q Consensus 17 ~~~~~C~--~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c 62 (332)
.|+|+|. ..+|..++.|+|+.|+|.|.|++||.|+. ..|.+++..
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG-~~C~d~d~P 49 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNG-RQCVAEGSP 49 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECS-SSEEETTCE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCC-CcCCCCCCC
Confidence 5789997 45699999999999999999999999875 357776654
No 101
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.11 E-value=0.00026 Score=43.25 Aligned_cols=30 Identities=27% Similarity=0.640 Sum_probs=26.0
Q ss_pred CCCCCCCCeee--cCCCceeeeCCCCCCCCCC
Q psy2857 289 DKPCGLRAICE--NTVPGFNCLCPKGYSGKPD 318 (332)
Q Consensus 289 ~~~C~~~~~C~--~~~g~~~C~C~~g~~g~~~ 318 (332)
..+|.++|+|+ +..++|.|.|++||+|..+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~C 42 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERC 42 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTS
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCC
Confidence 36899999998 6788999999999999854
No 102
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=97.08 E-value=0.00027 Score=48.49 Aligned_cols=70 Identities=23% Similarity=0.541 Sum_probs=54.8
Q ss_pred CCCCCCCCCCeeeeC-CCCeEeeCCCCCccCCCCCCCCc--ccccCCCCCCCCCCceeeCC-----CCeeeeCCCCCCC
Q psy2857 22 CQSNPCGVNATCIDT-QGSYSCVCKEHYTGDPYQACSDI--DECKALDKPCGLRAICENTV-----PGFNCLCPKGYSG 92 (332)
Q Consensus 22 C~~~~C~~~g~C~~~-~g~~~C~C~~G~~g~~~~~C~~~--~~c~~~~~~C~~~~~C~~~~-----~~~~C~C~~g~~~ 92 (332)
|....|+.++.|... .+..+|+|.+||.++. ..|... ..|.....-|.+++.|.... +...|.|..||.-
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg-~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~ 84 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEG-DKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSY 84 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEET-TEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCC
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCC-CeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcc
Confidence 555668899999985 6889999999999875 456655 46765445688999998774 5789999998753
No 103
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.04 E-value=0.00096 Score=46.02 Aligned_cols=71 Identities=21% Similarity=0.398 Sum_probs=56.8
Q ss_pred CcCCCCCCCCCCeeeeC-CCCeEeeCCCCCccCCCCCCCCccc-ccCCCCCCCCCCceeeCC-CCeeeeCCCCCC
Q psy2857 20 NECQSNPCGVNATCIDT-QGSYSCVCKEHYTGDPYQACSDIDE-CKALDKPCGLRAICENTV-PGFNCLCPKGYS 91 (332)
Q Consensus 20 ~~C~~~~C~~~g~C~~~-~g~~~C~C~~G~~g~~~~~C~~~~~-c~~~~~~C~~~~~C~~~~-~~~~C~C~~g~~ 91 (332)
.-|....|+.++.|... .|...|+|..||.++. ..|+.+++ |.....-|..++.|..+. ..-.|.|..+|.
T Consensus 11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg-~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVG-GKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp TSCCSSCCCTTEEEEECTTSCEEEEECTTEEECS-SSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred cEecCCCCCCCCCeEECCCCCEeEEEECCeeccC-CEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 34666668999999994 7888999999999975 56777777 655445699999999885 688999999875
No 104
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.02 E-value=0.00036 Score=43.69 Aligned_cols=36 Identities=28% Similarity=0.707 Sum_probs=28.6
Q ss_pred CCCCCCCCeeecCC-CceeeeCCCCCCCCCCCCccccccc
Q psy2857 289 DKPCGLRAICENTV-PGFNCLCPKGYSGKPDAKVACEQEK 327 (332)
Q Consensus 289 ~~~C~~~~~C~~~~-g~~~C~C~~g~~g~~~~~~~c~~~~ 327 (332)
.+.|. ..|+++. ++|.|.|++||....+.+ +|.++.
T Consensus 6 nggC~--~~C~n~~~gs~~C~C~~Gy~L~~D~~-tC~d~~ 42 (59)
T 2wph_E 6 NGRCE--QFCKNSADNKVVCSCTEGYRLAENQK-SCEPAV 42 (59)
T ss_dssp GGGCS--SEEEECSTTCEEEECCTTEEECTTSS-CEEESS
T ss_pred CCCcC--CEeEeCCCCCEEeeCCCCcEECCCCC-cccCCC
Confidence 34564 5899999 699999999999888766 777654
No 105
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.79 E-value=0.00054 Score=60.67 Aligned_cols=72 Identities=29% Similarity=0.749 Sum_probs=24.6
Q ss_pred CCCC-CeeeecCCceeeecCCCcccCCCCcccc-------------------ccc------------ccCCCCCCCCCCe
Q psy2857 250 CGVN-ATCIDTQGSYSCVCKEHYTGDPYQACSD-------------------IDE------------CKALDKPCGLRAI 297 (332)
Q Consensus 250 C~~~-~~C~~~~~~~~C~C~~G~~g~~~~~C~~-------------------~d~------------C~~~~~~C~~~~~ 297 (332)
|..+ ..|....+.++|.|+.+++|..|+.|.+ .++ |.....+|.+++.
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ngg~ 378 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGT 378 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-------------------
T ss_pred CCCchhhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCCCCC
Confidence 4433 3688878889999999999988776532 112 2223346777888
Q ss_pred eecCCCceeeeCCCCCCCCCCCCcccc
Q psy2857 298 CENTVPGFNCLCPKGYSGKPDAKVACE 324 (332)
Q Consensus 298 C~~~~g~~~C~C~~g~~g~~~~~~~c~ 324 (332)
|++.. +|.|++||.|..+..-.|.
T Consensus 379 C~~~~---~C~C~~G~~G~~Ce~c~C~ 402 (426)
T 3zyj_B 379 CHNNV---RCLCPAAYTGILCEKLRCE 402 (426)
T ss_dssp ---------------------------
T ss_pred cCCCC---CCcCCCCCcCCCCcCCCCC
Confidence 87655 8999999999887665555
No 106
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=96.79 E-value=0.0013 Score=41.08 Aligned_cols=42 Identities=21% Similarity=0.537 Sum_probs=31.0
Q ss_pred CeeeecC-CceeeecCCCcccCCC-CcccccccccCCCCCCCCCCeeecCC
Q psy2857 254 ATCIDTQ-GSYSCVCKEHYTGDPY-QACSDIDECKALDKPCGLRAICENTV 302 (332)
Q Consensus 254 ~~C~~~~-~~~~C~C~~G~~g~~~-~~C~~~d~C~~~~~~C~~~~~C~~~~ 302 (332)
..|++++ ++|+|.|++||.+... .+|.|+++ .+|. ..|+|..
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~-----~pC~--~~c~n~~ 54 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP-----FPCG--RVSVSQT 54 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEECTTSSCEEESSS-----SCTT--CCCSCCC
T ss_pred CEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC-----CCCC--Ccccccc
Confidence 5799999 6999999999987643 56887653 4664 4566643
No 107
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.76 E-value=0.0011 Score=58.82 Aligned_cols=47 Identities=23% Similarity=0.475 Sum_probs=0.0
Q ss_pred CCCCCCCeeeecCCceeeecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCceeeeCC
Q psy2857 248 NPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCP 310 (332)
Q Consensus 248 ~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~ 310 (332)
.+|.++++|++.. +|+|++||+|..|+. ..|.++|.|....| .|.=+
T Consensus 371 ~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~-----------c~C~~~g~C~~~~G--qc~~~ 417 (426)
T 3zyj_B 371 LHCQNGGTCHNNV---RCLCPAAYTGILCEK-----------LRCEEAGSCGSDSG--QGAPP 417 (426)
T ss_dssp ---------------------------------------------------------------
T ss_pred ccCCCCCCcCCCC---CCcCCCCCcCCCCcC-----------CCCCCCCcccCCCC--ccCCC
Confidence 5788899998766 899999999987652 25666677876665 45433
No 108
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.73 E-value=0.00043 Score=54.00 Aligned_cols=53 Identities=30% Similarity=0.698 Sum_probs=40.0
Q ss_pred CCcccCCCCcccccccccCCCCC---CCCCCeeecCCCceeeeCCCCCCCCCCCCcccccc
Q psy2857 269 EHYTGDPYQACSDIDECKALDKP---CGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQE 326 (332)
Q Consensus 269 ~G~~g~~~~~C~~~d~C~~~~~~---C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~c~~~ 326 (332)
.||.+.. .+.++++|...... |. ..|+|+.++|.|.|++||++..+.+ +|.++
T Consensus 113 ~Gf~~~~--~~~di~eC~~~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~d~~-~C~~~ 168 (170)
T 1szb_A 113 TGFEAFY--AAEDIDECQVAPGEAPTCD--HHCHNHLGGFYCSCRAGYVLHRNKR-TCSEQ 168 (170)
T ss_dssp CEEEEEE--EEEECCTTCCCTTSCCSSS--SEEEEETTEEEEECCTTEEECTTSS-CEEEC
T ss_pred cCceeee--eccccCcccCCCCCCCccC--CccccCCCCEEEeCCCCcEECCCCC-ccccc
Confidence 5676643 35788999865443 86 3899999999999999999877654 67654
No 109
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.61 E-value=0.001 Score=41.38 Aligned_cols=29 Identities=28% Similarity=0.610 Sum_probs=24.7
Q ss_pred CCCCCCeeee----cCCceeeecCCCcccCCCC
Q psy2857 249 PCGVNATCID----TQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 249 ~C~~~~~C~~----~~~~~~C~C~~G~~g~~~~ 277 (332)
+|.++++|+. ..++|.|.|++||+|..++
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence 8999999983 4457999999999999775
No 110
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.59 E-value=0.00068 Score=52.31 Aligned_cols=42 Identities=26% Similarity=0.763 Sum_probs=34.0
Q ss_pred CCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCccccc
Q psy2857 19 INECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECK 63 (332)
Q Consensus 19 ~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~ 63 (332)
.++|...+|..+++|+++.++|.|+|++||.|.. |+.+++|.
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~---Ce~~~~c~ 160 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE---CEYVRDDD 160 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTT---SCEECC--
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcc---cccCcccC
Confidence 4578888899899999999999999999999964 55566664
No 111
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.38 E-value=0.0047 Score=45.02 Aligned_cols=29 Identities=21% Similarity=0.639 Sum_probs=24.8
Q ss_pred CCCCCCeeeecC--Cce-eeecCCCcccCCCC
Q psy2857 249 PCGVNATCIDTQ--GSY-SCVCKEHYTGDPYQ 277 (332)
Q Consensus 249 ~C~~~~~C~~~~--~~~-~C~C~~G~~g~~~~ 277 (332)
||.++++|++.. .+| +|.|++||+|..++
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce 33 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 33 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCcccc
Confidence 688999999874 556 99999999999776
No 112
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.17 E-value=0.003 Score=58.54 Aligned_cols=36 Identities=28% Similarity=0.749 Sum_probs=33.4
Q ss_pred cCccCCCCCCCCCeeee-cCCceeeecC-CCcccCCCC
Q psy2857 242 INECQSNPCGVNATCID-TQGSYSCVCK-EHYTGDPYQ 277 (332)
Q Consensus 242 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~~g~~~~ 277 (332)
+|+|.++||.++++|++ ..++|.|.|+ +||+|..|+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 47899999999999999 8999999999 999999876
No 113
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.95 E-value=0.0037 Score=57.88 Aligned_cols=36 Identities=28% Similarity=0.749 Sum_probs=33.3
Q ss_pred CCcCCCCCCCCCCeeee-CCCCeEeeCC-CCCccCCCC
Q psy2857 19 INECQSNPCGVNATCID-TQGSYSCVCK-EHYTGDPYQ 54 (332)
Q Consensus 19 ~~~C~~~~C~~~g~C~~-~~g~~~C~C~-~G~~g~~~~ 54 (332)
+|+|.++||.++|+|++ ..++|.|.|. +||+|..|+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 58899999999999999 8899999999 999998775
No 114
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=95.89 E-value=0.0051 Score=57.14 Aligned_cols=36 Identities=31% Similarity=0.768 Sum_probs=32.2
Q ss_pred cCccCCCCCCCCCeeee-cCCceeeecC-CCcccCCCC
Q psy2857 242 INECQSNPCGVNATCID-TQGSYSCVCK-EHYTGDPYQ 277 (332)
Q Consensus 242 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~~g~~~~ 277 (332)
+++|.++||.++++|++ ..++|.|.|+ +||+|..|+
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 46899999999999995 5589999999 999999886
No 115
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.88 E-value=0.0031 Score=39.18 Aligned_cols=28 Identities=29% Similarity=0.631 Sum_probs=23.2
Q ss_pred CCCCCCeeec----CCCceeeeCCCCCCCCCC
Q psy2857 291 PCGLRAICEN----TVPGFNCLCPKGYSGKPD 318 (332)
Q Consensus 291 ~C~~~~~C~~----~~g~~~C~C~~g~~g~~~ 318 (332)
+|.++|+|+. ..++|.|.|++||+|..+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~C 46 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRC 46 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSS
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCC
Confidence 7999999983 445789999999999844
No 116
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.70 E-value=0.0045 Score=48.05 Aligned_cols=39 Identities=36% Similarity=0.852 Sum_probs=31.6
Q ss_pred CCceec---ccCCcCCCCC-----CCCCCeeeeCCCCeEeeCCCCCccC
Q psy2857 11 LGVRAI---VDINECQSNP-----CGVNATCIDTQGSYSCVCKEHYTGD 51 (332)
Q Consensus 11 ~g~~~~---~~~~~C~~~~-----C~~~g~C~~~~g~~~C~C~~G~~g~ 51 (332)
.||.+. .++++|...+ |. ..|+++.++|.|.|.+||+..
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~ 159 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCD--HHCHNHLGGFYCSCRAGYVLH 159 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSS--SEEEEETTEEEEECCTTEEEC
T ss_pred cCceeeeeccccCcccCCCCCCCccC--CccccCCCCEEEeCCCCcEEC
Confidence 566666 6789998765 65 379999999999999999854
No 117
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=95.47 E-value=0.0095 Score=45.82 Aligned_cols=40 Identities=25% Similarity=0.686 Sum_probs=30.9
Q ss_pred ccCCCCCCCCCeeeecCCceeeecCCCcccCCCCccccccccc
Q psy2857 244 ECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECK 286 (332)
Q Consensus 244 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~ 286 (332)
.|...+|..+++|++..++|.|.|.+||.|.. |+.+.+|.
T Consensus 121 ~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~---C~~~~~c~ 160 (164)
T 3cfw_A 121 SCQPWSCSGHGECVEIINNYTCNCDVGYYGPQ---CQFVQVDP 160 (164)
T ss_dssp CCCTTSSCSSEEEEEETTEEEEEECTTCBSSS---SCBC----
T ss_pred CCCCCcCCCCCeecccCCCceeeeCCCccccc---ccccccCc
Confidence 45567899999999999999999999999985 55666664
No 118
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=95.42 E-value=0.0086 Score=55.64 Aligned_cols=36 Identities=31% Similarity=0.768 Sum_probs=32.0
Q ss_pred CCcCCCCCCCCCCeeee-CCCCeEeeCC-CCCccCCCC
Q psy2857 19 INECQSNPCGVNATCID-TQGSYSCVCK-EHYTGDPYQ 54 (332)
Q Consensus 19 ~~~C~~~~C~~~g~C~~-~~g~~~C~C~-~G~~g~~~~ 54 (332)
+++|.++||.++|+|++ ..++|.|.|. +||+|..|+
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 47899999999999996 4589999999 999998775
No 119
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.17 E-value=0.025 Score=41.11 Aligned_cols=55 Identities=18% Similarity=0.399 Sum_probs=37.6
Q ss_pred CCCCCCeeeeCC--CCe-EeeCCCCCccCCCCCCCCcccccCCCCCCCCCCceeeCCCCeeeeCCCCCCCC
Q psy2857 26 PCGVNATCIDTQ--GSY-SCVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGK 93 (332)
Q Consensus 26 ~C~~~g~C~~~~--g~~-~C~C~~G~~g~~~~~C~~~~~c~~~~~~C~~~~~C~~~~~~~~C~C~~g~~~~ 93 (332)
||.++|+|++.. .+| .|.|++||+|..++. +++ .+|.. .....|++.+..++.|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~--~~~------~~C~~-----g~G~~YrG~~~~t~sG~ 59 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI--DKS------KTCYE-----GNGHFYRGKASTDTMGR 59 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCE--ESS------CCSBC-----SSCTTCCSCCCBBTTSC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccc--cCc------CCCcc-----cccccceeeccccccCC
Confidence 688899999984 555 999999999976642 111 23321 12335788888777776
No 120
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=94.97 E-value=0.011 Score=44.96 Aligned_cols=35 Identities=23% Similarity=0.775 Sum_probs=31.1
Q ss_pred CccCCCCCCCCCeeeecCCceeeecCCCcccCCCC
Q psy2857 243 NECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 243 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~ 277 (332)
++|.+.||.+++.|.+...+|.|.|.+||+|+.|+
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce 154 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCcccc
Confidence 45667889889999999999999999999999775
No 121
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.85 E-value=0.018 Score=43.97 Aligned_cols=52 Identities=33% Similarity=0.764 Sum_probs=37.2
Q ss_pred CCcccCCCCcccccccccCC-CCCCCCCCeeecCCCceeeeCCCCCCCCCCCCccccc
Q psy2857 269 EHYTGDPYQACSDIDECKAL-DKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACEQ 325 (332)
Q Consensus 269 ~G~~g~~~~~C~~~d~C~~~-~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~c~~ 325 (332)
.||.... .+.++|+|... ..+|. +.|.+..++|.|.|++||++..+++ .|..
T Consensus 106 ~GF~~~y--~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~-~C~~ 158 (159)
T 1nzi_A 106 TGFAAYY--VATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLHDDMK-NCGV 158 (159)
T ss_dssp CEEEEEE--EEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEECTTSS-CEEC
T ss_pred ccceeee--ecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEECCCCC-cccc
Confidence 3555432 24678899753 24574 5899999999999999999887665 5753
No 122
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=94.66 E-value=0.021 Score=43.86 Aligned_cols=41 Identities=24% Similarity=0.667 Sum_probs=31.3
Q ss_pred CcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCccccc
Q psy2857 20 NECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECK 63 (332)
Q Consensus 20 ~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~c~ 63 (332)
..|...+|..++.|.+..++|.|+|.+||.|.. |..+.+|.
T Consensus 120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~---C~~~~~c~ 160 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQ---CQFVQVDP 160 (164)
T ss_dssp CCCCTTSSCSSEEEEEETTEEEEEECTTCBSSS---SCBC----
T ss_pred CCCCCCcCCCCCeecccCCCceeeeCCCccccc---ccccccCc
Confidence 456677899999999999999999999999975 44555554
No 123
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=94.42 E-value=0.082 Score=35.47 Aligned_cols=69 Identities=23% Similarity=0.420 Sum_probs=53.0
Q ss_pred ccCCCCCCCCCeeeecC-CceeeecCCCcccCCCCcccccc--cccCCCCCCCCCCeeecCC-CceeeeCCCCC
Q psy2857 244 ECQSNPCGVNATCIDTQ-GSYSCVCKEHYTGDPYQACSDID--ECKALDKPCGLRAICENTV-PGFNCLCPKGY 313 (332)
Q Consensus 244 ~C~~~~C~~~~~C~~~~-~~~~C~C~~G~~g~~~~~C~~~d--~C~~~~~~C~~~~~C~~~~-g~~~C~C~~g~ 313 (332)
.|....|..++.|+... +.-.|+|..+|.-+.. .|...+ .|....+.|..++.|.... ..-.|.|...+
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~-kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKEDAG-KCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTEEEETT-EEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCeEecCC-EEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 46666788899999865 5678999999987543 355443 6877778899999998777 56789998764
No 124
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=94.14 E-value=0.06 Score=40.31 Aligned_cols=29 Identities=21% Similarity=0.592 Sum_probs=24.5
Q ss_pred CCCCCCeeeec--CCce-eeecCCCcccCCCC
Q psy2857 249 PCGVNATCIDT--QGSY-SCVCKEHYTGDPYQ 277 (332)
Q Consensus 249 ~C~~~~~C~~~--~~~~-~C~C~~G~~g~~~~ 277 (332)
||.++++|+.. ...| +|.|++||.|..++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Ce 45 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 45 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCcee
Confidence 79999999876 2455 89999999999776
No 125
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=93.66 E-value=0.02 Score=43.56 Aligned_cols=36 Identities=22% Similarity=0.748 Sum_probs=31.3
Q ss_pred CCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCC
Q psy2857 19 INECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 19 ~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~ 54 (332)
..+|.+.||..++.|.+....|.|.|.+||+|+.|+
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce 154 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccc
Confidence 456777889888999999999999999999998664
No 126
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=93.22 E-value=0.052 Score=35.62 Aligned_cols=34 Identities=24% Similarity=0.630 Sum_probs=24.9
Q ss_pred CccC---CCCCCCCCeee--ecCCceeeecCCCcccCCCC
Q psy2857 243 NECQ---SNPCGVNATCI--DTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 243 ~~C~---~~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~ 277 (332)
+.|. .+.|.++ +|+ ...+.+.|.|++||+|..|+
T Consensus 38 ~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 38 DPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp -CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred CCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 4565 4678765 895 33467899999999999775
No 127
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=93.17 E-value=0.07 Score=31.78 Aligned_cols=29 Identities=31% Similarity=0.629 Sum_probs=22.8
Q ss_pred CCCCCCCeee--ecCCceeeecCCCcccCCCC
Q psy2857 248 NPCGVNATCI--DTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 248 ~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~ 277 (332)
..|.+ |+|. ...+.+.|.|++||+|..++
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence 45666 7886 45567899999999999875
No 128
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=92.47 E-value=0.077 Score=44.73 Aligned_cols=45 Identities=31% Similarity=0.706 Sum_probs=32.9
Q ss_pred cCccCCC-CCCCCCeeeecCCceeeecCCCcccCC-CCccccccccc
Q psy2857 242 INECQSN-PCGVNATCIDTQGSYSCVCKEHYTGDP-YQACSDIDECK 286 (332)
Q Consensus 242 ~~~C~~~-~C~~~~~C~~~~~~~~C~C~~G~~g~~-~~~C~~~d~C~ 286 (332)
.|||... .-...+.|.++.++|+|.|.+||.+.. ...|...++|.
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 4677654 333457899999999999999998764 35677777764
No 129
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=92.36 E-value=0.11 Score=30.95 Aligned_cols=29 Identities=28% Similarity=0.547 Sum_probs=22.5
Q ss_pred CCCCCCCeeeec--CCceeeecCCCcccCCCC
Q psy2857 248 NPCGVNATCIDT--QGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 248 ~~C~~~~~C~~~--~~~~~C~C~~G~~g~~~~ 277 (332)
..|.++ +|... .+.+.|.|++||+|..++
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 456665 89753 467999999999999765
No 130
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=92.16 E-value=0.22 Score=29.59 Aligned_cols=29 Identities=24% Similarity=0.618 Sum_probs=22.7
Q ss_pred CCCCCCCeee--ecCCceeeecCCCcccCCCC
Q psy2857 248 NPCGVNATCI--DTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 248 ~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~ 277 (332)
+-|.+ ++|. ...+.+.|.|++||+|..++
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence 55765 5997 45567899999999999765
No 131
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.98 E-value=0.19 Score=38.18 Aligned_cols=42 Identities=29% Similarity=0.624 Sum_probs=31.8
Q ss_pred eecCCCCCCC--CCCCCCCceecCCCceEeeCCCCCccCCCCcccc
Q psy2857 139 CVDVDECQLG--DPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCK 182 (332)
Q Consensus 139 c~~~~~C~~~--~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~ 182 (332)
+.++++|... ..|. ..|.+..++|.|.|.+||.+......|.
T Consensus 114 ~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 114 ATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp EEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred cccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEECCCCCccc
Confidence 4578889732 3453 5799999999999999999876666554
No 132
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=91.46 E-value=0.15 Score=45.41 Aligned_cols=36 Identities=22% Similarity=0.697 Sum_probs=32.3
Q ss_pred cCccCCCCCCCCCeeeecCCceeeecCC-CcccCCCC
Q psy2857 242 INECQSNPCGVNATCIDTQGSYSCVCKE-HYTGDPYQ 277 (332)
Q Consensus 242 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~-G~~g~~~~ 277 (332)
.+.|.+.||.++++|++..++|.|.|+. ||.|..|+
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~ 221 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 221 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence 4678889999999999999999999996 99998764
No 133
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=91.10 E-value=0.091 Score=45.72 Aligned_cols=39 Identities=28% Similarity=0.866 Sum_probs=22.2
Q ss_pred CccCC-CCCCCCCeeeecCCceeeecCCCcccCCC-Ccccccc
Q psy2857 243 NECQS-NPCGVNATCIDTQGSYSCVCKEHYTGDPY-QACSDID 283 (332)
Q Consensus 243 ~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~g~~~-~~C~~~d 283 (332)
|||.. ..| ...|.++.++|+|.|++||.+... .+|..++
T Consensus 2 ~ec~~~~~C--~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~ 42 (349)
T 3v64_C 2 NECAEEGYC--SQGCTNSEGAFQCWCEAGYELRPDRRSCKALG 42 (349)
T ss_dssp -------CC--SSEECCC---CCEECCTTEEECTTSSCEEESS
T ss_pred cccCCCCCC--cCeeecCCCCeEEECCCCccCCCCCCcccccc
Confidence 56652 334 358999999999999999987643 4565544
No 134
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=90.80 E-value=0.24 Score=29.38 Aligned_cols=29 Identities=24% Similarity=0.455 Sum_probs=22.5
Q ss_pred CCCCCCCeeecC--CCceeeeCCCCCCCCCCC
Q psy2857 290 KPCGLRAICENT--VPGFNCLCPKGYSGKPDA 319 (332)
Q Consensus 290 ~~C~~~~~C~~~--~g~~~C~C~~g~~g~~~~ 319 (332)
+.|.++ +|... ...+.|.|++||+|..+.
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 578866 99753 467899999999998543
No 135
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=90.80 E-value=0.19 Score=44.78 Aligned_cols=36 Identities=22% Similarity=0.697 Sum_probs=31.6
Q ss_pred CCcCCCCCCCCCCeeeeCCCCeEeeCCC-CCccCCCC
Q psy2857 19 INECQSNPCGVNATCIDTQGSYSCVCKE-HYTGDPYQ 54 (332)
Q Consensus 19 ~~~C~~~~C~~~g~C~~~~g~~~C~C~~-G~~g~~~~ 54 (332)
.++|...||.++|+|+....+|.|.|.. ||.|..|+
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~ 221 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 221 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence 3678889999999999999999999996 99997653
No 136
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=90.66 E-value=0.13 Score=30.53 Aligned_cols=29 Identities=31% Similarity=0.611 Sum_probs=22.1
Q ss_pred CCCCCCCeeee--CCCCeEeeCCCCCccCCCC
Q psy2857 25 NPCGVNATCID--TQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 25 ~~C~~~g~C~~--~~g~~~C~C~~G~~g~~~~ 54 (332)
.-|.+ |+|+- ..+.+.|.|++||+|..++
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence 34765 89973 3567899999999997664
No 137
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=90.63 E-value=0.2 Score=29.75 Aligned_cols=35 Identities=26% Similarity=0.628 Sum_probs=25.3
Q ss_pred CCcCCC---CCCCCCCeeee--CCCCeEeeCCCCCccCCCC
Q psy2857 19 INECQS---NPCGVNATCID--TQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 19 ~~~C~~---~~C~~~g~C~~--~~g~~~C~C~~G~~g~~~~ 54 (332)
.++|.. .-|. ||+|+- ..+.+.|.|.+||+|..++
T Consensus 9 ~~~C~~~~~~yC~-nG~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 9 KNPCNAEFQNFCI-HGECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp CCTTTTTGGGTCS-SSEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcccCchhhCcCC-CCEEEEecCCCCeeEECCCCccccccc
Confidence 356653 3476 579983 3567899999999997653
No 138
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=90.62 E-value=0.14 Score=39.59 Aligned_cols=30 Identities=23% Similarity=0.713 Sum_probs=24.9
Q ss_pred ccCCCCCCCCCeeeecCCceeeecCCCcccCCCC
Q psy2857 244 ECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 244 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~ 277 (332)
.|. .+|.++|.|+... +|.|++||+|..|+
T Consensus 150 ~C~-~~C~ngG~Cv~P~---~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 150 ECP-GGCRNGGFCNERR---ICECPDGFHGPHCE 179 (188)
T ss_dssp CCT-TCCCTTCEECTTS---CEECCTTCBTTTTC
T ss_pred ccC-CCCCCCCEeCCCC---cccCcCCCCCCCCc
Confidence 454 6899999998744 89999999999775
No 139
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=90.54 E-value=0.11 Score=34.05 Aligned_cols=35 Identities=23% Similarity=0.560 Sum_probs=24.9
Q ss_pred CCcCC---CCCCCCCCeeeeC--CCCeEeeCCCCCccCCCC
Q psy2857 19 INECQ---SNPCGVNATCIDT--QGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 19 ~~~C~---~~~C~~~g~C~~~--~g~~~C~C~~G~~g~~~~ 54 (332)
.++|. ...|.+ |+|+.. .+.+.|.|.+||+|..++
T Consensus 37 ~~pC~~~~~~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIH-GECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp --CTTTTTTTCCSS-EEECCBGGGTBCCEEECTTEESTTCC
T ss_pred CCCCCccccCcCCC-CEeeeecCCCCeEEEcCCCccccccc
Confidence 46777 566875 699543 467899999999997653
No 140
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=88.92 E-value=0.3 Score=37.83 Aligned_cols=29 Identities=17% Similarity=0.544 Sum_probs=23.3
Q ss_pred CCCCCCCCCeeeeCCCCeEeeCCCCCccCCCC
Q psy2857 23 QSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 23 ~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~ 54 (332)
...+|.++|.|+.-. .|.|++||.|..|+
T Consensus 151 C~~~C~ngG~Cv~P~---~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 151 CPGGCRNGGFCNERR---ICECPDGFHGPHCE 179 (188)
T ss_dssp CTTCCCTTCEECTTS---CEECCTTCBTTTTC
T ss_pred cCCCCCCCCEeCCCC---cccCcCCCCCCCCc
Confidence 334688899998765 79999999998764
No 141
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=88.38 E-value=0.18 Score=42.45 Aligned_cols=45 Identities=31% Similarity=0.707 Sum_probs=31.1
Q ss_pred cCCcCCCC-CCCCCCeeeeCCCCeEeeCCCCCccCC-CCCCCCcccc
Q psy2857 18 DINECQSN-PCGVNATCIDTQGSYSCVCKEHYTGDP-YQACSDIDEC 62 (332)
Q Consensus 18 ~~~~C~~~-~C~~~g~C~~~~g~~~C~C~~G~~g~~-~~~C~~~~~c 62 (332)
++|+|... +-+....|.++.++|.|.|..||.... ..+|.+.++|
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c 47 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQC 47 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTT
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCcccccccc
Confidence 46788876 423346799999999999999998643 3556655554
No 142
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=87.75 E-value=0.35 Score=41.25 Aligned_cols=41 Identities=27% Similarity=0.716 Sum_probs=31.2
Q ss_pred ccccccCC---CCCCCCCCeeecCC------CceeeeCCCCCCCCCCCCcccc
Q psy2857 281 DIDECKAL---DKPCGLRAICENTV------PGFNCLCPKGYSGKPDAKVACE 324 (332)
Q Consensus 281 ~~d~C~~~---~~~C~~~~~C~~~~------g~~~C~C~~g~~g~~~~~~~c~ 324 (332)
+.++|... .+.|. ..|++.+ ++|.|.|+.||+..++.+ +|.
T Consensus 266 ~~n~C~~~~~~ng~Cs--~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~-~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQ--YLCLPAPQINPHSPKFTCACPDGMLLARDMR-SCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCS--SEEEECCCCSTTCCSEEEECCTTCEECTTSS-CEE
T ss_pred ccccccccccCCCCcC--cccCCCccccCCCCCeEeeCCCCCEECCCCC-ccC
Confidence 45778754 44674 6899775 689999999999988776 675
No 143
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=86.13 E-value=0.94 Score=33.76 Aligned_cols=29 Identities=21% Similarity=0.592 Sum_probs=24.0
Q ss_pred CCCCCCeeeeC--CCCe-EeeCCCCCccCCCC
Q psy2857 26 PCGVNATCIDT--QGSY-SCVCKEHYTGDPYQ 54 (332)
Q Consensus 26 ~C~~~g~C~~~--~g~~-~C~C~~G~~g~~~~ 54 (332)
||.++|+|+.. ...| .|.|++||.|..++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Ce 45 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE 45 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCcee
Confidence 79999999886 3455 89999999997664
No 144
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=85.58 E-value=0.4 Score=45.29 Aligned_cols=42 Identities=31% Similarity=0.752 Sum_probs=33.8
Q ss_pred ccccccCCCCCCCCCCeeecCC-CceeeeCCCCCCCCCCCCccccc
Q psy2857 281 DIDECKALDKPCGLRAICENTV-PGFNCLCPKGYSGKPDAKVACEQ 325 (332)
Q Consensus 281 ~~d~C~~~~~~C~~~~~C~~~~-g~~~C~C~~g~~g~~~~~~~c~~ 325 (332)
.+++|....+.|. ..|++.+ ++|.|.|+.||....+.+ +|.+
T Consensus 264 ~~n~C~~~ng~C~--~~C~~~~~~~~~C~C~~g~~l~~d~~-~C~~ 306 (628)
T 4a0p_A 264 GWNECASSNGHCS--HLCLAVPVGGFVCGCPAHYSLNADNR-TCSA 306 (628)
T ss_dssp CCCTTTTTGGGCS--SEEEEETTTEEEEECSTTCEECTTSS-CEEC
T ss_pred cceEeccCCCCcc--hhhhcCCCCCeeEEcCCCcEecccCC-cCcc
Confidence 4688876556774 6999988 999999999999887765 6754
No 145
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=85.01 E-value=0.73 Score=38.50 Aligned_cols=58 Identities=21% Similarity=0.433 Sum_probs=38.8
Q ss_pred CCCCCeeeecCCceeeecCCCcccCCCCcccccc--------cccCC--CCCCCCCCeeecCCCceeeeCCCCCCCC
Q psy2857 250 CGVNATCIDTQGSYSCVCKEHYTGDPYQACSDID--------ECKAL--DKPCGLRAICENTVPGFNCLCPKGYSGK 316 (332)
Q Consensus 250 C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d--------~C~~~--~~~C~~~~~C~~~~g~~~C~C~~g~~g~ 316 (332)
|..++.|.-. .|.|.+||+|..++ |.... .|... ...|..+|.|+-. .|.|..++.+.
T Consensus 198 C~g~G~~~CG----~C~C~~g~~G~~Ce-C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~~~ 265 (280)
T 2p26_A 198 CHGKGFLECG----ICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPG 265 (280)
T ss_dssp GGGSEEEETT----EEEECTTEESTTSC-EECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSSTT
T ss_pred cCCCCeECCC----ceeCCCCCcCCcce-ecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCCCC
Confidence 5545555432 78999999999875 43221 57432 2358888889754 89998887665
No 146
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=84.80 E-value=0.69 Score=39.51 Aligned_cols=43 Identities=21% Similarity=0.569 Sum_probs=31.2
Q ss_pred cccccCCCCCCCCCCeeecCCC--ceeeeCCCCCCCCCCCCccccccc
Q psy2857 282 IDECKALDKPCGLRAICENTVP--GFNCLCPKGYSGKPDAKVACEQEK 327 (332)
Q Consensus 282 ~d~C~~~~~~C~~~~~C~~~~g--~~~C~C~~g~~g~~~~~~~c~~~~ 327 (332)
.++|......|. ..|++.++ +|.|.|+.||+...+.+ +|.+.+
T Consensus 267 ~n~C~~~ng~Cs--~~C~~~~~~~~~~C~C~~g~~l~~d~~-~c~~~~ 311 (318)
T 3sov_A 267 TNPCGIDNGGCS--HLCLMSPVKPFYQCACPTGVKLLENGK-TCKDGN 311 (318)
T ss_dssp CCTTTTTGGGCS--SEEEECSSTTSEEEECSTTCCBCTTSS-CBCC--
T ss_pred ccccccCCCCcc--eEEecCCCCCCeEEECCCCCEECCCCC-CCCCCC
Confidence 466765445674 68988765 79999999999998876 787644
No 147
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.45 E-value=0.35 Score=41.97 Aligned_cols=39 Identities=41% Similarity=0.882 Sum_probs=23.3
Q ss_pred CCCCCCCCCCCCCceecCCCceEeeCCCCCccCCCCccccc
Q psy2857 143 DECQLGDPCGPQAQCTNTPGSFRCDCVEGYVGAPPRIKCKD 183 (332)
Q Consensus 143 ~~C~~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~c~~ 183 (332)
+||.....|. ..|.++.++|.|.|++||........|.+
T Consensus 2 ~ec~~~~~C~--~~C~n~~g~~~C~C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 2 NECAEEGYCS--QGCTNSEGAFQCWCEAGYELRPDRRSCKA 40 (349)
T ss_dssp -------CCS--SEECCC---CCEECCTTEEECTTSSCEEE
T ss_pred cccCCCCCCc--CeeecCCCCeEEECCCCccCCCCCCcccc
Confidence 4565234454 47999999999999999998777777764
No 148
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=83.80 E-value=0.75 Score=47.19 Aligned_cols=36 Identities=22% Similarity=0.714 Sum_probs=32.4
Q ss_pred cCccCCCCCCCCCeeeecCCceeeecC-CCcccCCCC
Q psy2857 242 INECQSNPCGVNATCIDTQGSYSCVCK-EHYTGDPYQ 277 (332)
Q Consensus 242 ~~~C~~~~C~~~~~C~~~~~~~~C~C~-~G~~g~~~~ 277 (332)
.+.|...||.++++|+....+|.|.|+ +||+|..|.
T Consensus 1017 ~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~ 1053 (1245)
T 3qcw_A 1017 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1053 (1245)
T ss_dssp CCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSC
T ss_pred cCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCcc
Confidence 367888999999999999999999999 699999775
No 149
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=82.43 E-value=0.88 Score=46.70 Aligned_cols=36 Identities=36% Similarity=0.787 Sum_probs=32.6
Q ss_pred cCccCCCCCCCCCeeeecCCceeeecC-CCcccCCCC
Q psy2857 242 INECQSNPCGVNATCIDTQGSYSCVCK-EHYTGDPYQ 277 (332)
Q Consensus 242 ~~~C~~~~C~~~~~C~~~~~~~~C~C~-~G~~g~~~~ 277 (332)
.+.|.++||.+++.|++...+|.|.|+ +||.|..|+
T Consensus 619 ~~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~ 655 (1245)
T 3qcw_A 619 AKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCE 655 (1245)
T ss_dssp SCGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSC
T ss_pred CCCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCc
Confidence 467888999999999999999999999 799998775
No 150
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=81.72 E-value=0.65 Score=43.78 Aligned_cols=41 Identities=27% Similarity=0.694 Sum_probs=33.1
Q ss_pred ccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCCCCcccc
Q psy2857 281 DIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVACE 324 (332)
Q Consensus 281 ~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~c~ 324 (332)
..++|....+.|. ..|++.+++|.|.|+.||...++.+ +|.
T Consensus 577 ~~~~C~~~ng~C~--~~C~~~~~~~~C~C~~g~~l~~d~~-~C~ 617 (619)
T 3s94_A 577 GSNPCAEENGGCS--HLCLYRPQGLRCACPIGFELISDMK-TCI 617 (619)
T ss_dssp CCCGGGSGGGGCS--SEEEEETTEEEEECCTTCEECSSTT-CEE
T ss_pred ccccCCCCCCChh--HhhccCCCCeEEECCCCCEECCCCC-cCC
Confidence 3577876556784 6999999999999999999887765 675
No 151
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=79.21 E-value=2.4 Score=28.43 Aligned_cols=70 Identities=24% Similarity=0.451 Sum_probs=49.5
Q ss_pred cCCCCCCCCCCeeeeC-CCCeEeeCCCCCccCCCCCCCCcc--cccCCCCCCCCCCceeeCC-CCeeeeCCCCCC
Q psy2857 21 ECQSNPCGVNATCIDT-QGSYSCVCKEHYTGDPYQACSDID--ECKALDKPCGLRAICENTV-PGFNCLCPKGYS 91 (332)
Q Consensus 21 ~C~~~~C~~~g~C~~~-~g~~~C~C~~G~~g~~~~~C~~~~--~c~~~~~~C~~~~~C~~~~-~~~~C~C~~g~~ 91 (332)
-|....|+.++.|... .+.-.|+|..+|.-+. ..|+.-+ .|.....-|.+++.|.... ..-.|.|...+.
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~-~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKEDA-GKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTEEEET-TEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCeEecC-CEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence 3555668899999997 4788999999998643 3344322 4544445577888888776 677898887654
No 152
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=78.70 E-value=0.5 Score=44.63 Aligned_cols=49 Identities=16% Similarity=0.291 Sum_probs=36.9
Q ss_pred eecCCCcccCCCCcccccccccCCCCCCCCCCeeecCCCceeeeCCCCCCCCCCCCccc
Q psy2857 265 CVCKEHYTGDPYQACSDIDECKALDKPCGLRAICENTVPGFNCLCPKGYSGKPDAKVAC 323 (332)
Q Consensus 265 C~C~~G~~g~~~~~C~~~d~C~~~~~~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~~~c 323 (332)
..|.+||.|+.+. .-..|. ..|..+|.|++. +|+|.+||.|..+....|
T Consensus 520 ~~C~~gw~g~dc~---i~~~Cp---~~C~ghG~C~~G----~C~Cd~G~~G~~C~~~~~ 568 (725)
T 2e26_A 520 FDKQQTWAIDNVY---IGDGCL---DMCSGHGRCVQG----SCVCDEQWGGLYCDEPET 568 (725)
T ss_dssp CCTTCCEEEEEEE---EESCSS---GGGGGSEEEETT----EEEECTTEESTTSCEESS
T ss_pred CccCCCccccccc---ccCCCC---cccCCCcEECCC----CEeeCCCccCCCcCccCC
Confidence 3689999998653 224553 478889999885 899999999998765343
No 153
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=77.99 E-value=0.44 Score=45.01 Aligned_cols=42 Identities=21% Similarity=0.415 Sum_probs=33.0
Q ss_pred EecCCceecccC--CcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCC
Q psy2857 8 RILLGVRAIVDI--NECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 8 ~c~~g~~~~~~~--~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~ 54 (332)
.|.+||.|+... ..|. ..|+.||.|++. .|+|.+||.|..|.
T Consensus 521 ~C~~gw~g~dc~i~~~Cp-~~C~ghG~C~~G----~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCL-DMCSGHGRCVQG----SCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEEESCSS-GGGGGSEEEETT----EEEECTTEESTTSC
T ss_pred ccCCCcccccccccCCCC-cccCCCcEECCC----CEeeCCCccCCCcC
Confidence 467899998432 4554 479999999997 49999999998764
No 154
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=74.32 E-value=1.1 Score=37.33 Aligned_cols=57 Identities=21% Similarity=0.453 Sum_probs=37.3
Q ss_pred CCCCCeeeeCCCCeEeeCCCCCccCCCCCCCCc--------ccccC--CCCCCCCCCceeeCCCCeeeeCCCCCCC
Q psy2857 27 CGVNATCIDTQGSYSCVCKEHYTGDPYQACSDI--------DECKA--LDKPCGLRAICENTVPGFNCLCPKGYSG 92 (332)
Q Consensus 27 C~~~g~C~~~~g~~~C~C~~G~~g~~~~~C~~~--------~~c~~--~~~~C~~~~~C~~~~~~~~C~C~~g~~~ 92 (332)
|+.+|.|.-. .|.|.+||.|..++ |... ..|.. ....|+.+|.|+-. .|.|..++.+
T Consensus 198 C~g~G~~~CG----~C~C~~g~~G~~Ce-C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~~ 264 (280)
T 2p26_A 198 CHGKGFLECG----ICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVP 264 (280)
T ss_dssp GGGSEEEETT----EEEECTTEESTTSC-EECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSST
T ss_pred cCCCCeECCC----ceeCCCCCcCCcce-ecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCCC
Confidence 6666666644 49999999998774 2211 14532 12358888888766 7999777654
No 155
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=72.83 E-value=4.7 Score=35.21 Aligned_cols=19 Identities=16% Similarity=0.373 Sum_probs=14.4
Q ss_pred CCCceEeeCCCCCccCCCC
Q psy2857 160 TPGSFRCDCVEGYVGAPPR 178 (332)
Q Consensus 160 ~~~~~~C~C~~G~~g~~~~ 178 (332)
..+.+.|.|.++|.|..+.
T Consensus 268 ~~~~~~C~C~~nt~G~~Ce 286 (375)
T 4aqt_A 268 EFDKLMCNCKHNTYGVDCE 286 (375)
T ss_dssp TTSCEEECCCTTEESTTSC
T ss_pred CCCCeeeeCcCCCcCCCcc
Confidence 4466788999999987664
No 156
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=72.17 E-value=2.7 Score=36.68 Aligned_cols=24 Identities=21% Similarity=0.454 Sum_probs=19.0
Q ss_pred ecCCceeeecCCCcccCCCCcccc
Q psy2857 258 DTQGSYSCVCKEHYTGDPYQACSD 281 (332)
Q Consensus 258 ~~~~~~~C~C~~G~~g~~~~~C~~ 281 (332)
+..+.+.|.|++||.|..|+.|.+
T Consensus 267 ~~~~~~~C~C~~nt~G~~Ce~C~~ 290 (375)
T 4aqt_A 267 NEFDKLMCNCKHNTYGVDCEKCLP 290 (375)
T ss_dssp CTTSCEEECCCTTEESTTSCEECT
T ss_pred CCCCCeeeeCcCCCcCCCcccCCC
Confidence 445678899999999999887654
No 157
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=69.96 E-value=2.9 Score=38.05 Aligned_cols=34 Identities=32% Similarity=0.723 Sum_probs=27.4
Q ss_pred CCcCCC---CCCCCCCeeeeC-CCCeEeeCCCCCccCC
Q psy2857 19 INECQS---NPCGVNATCIDT-QGSYSCVCKEHYTGDP 52 (332)
Q Consensus 19 ~~~C~~---~~C~~~g~C~~~-~g~~~C~C~~G~~g~~ 52 (332)
++.|.. .+|..++.|+.+ .+.|.|.|+.||.|..
T Consensus 18 ~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G 55 (551)
T 3fby_A 18 QRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNG 55 (551)
T ss_dssp CCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSS
T ss_pred cccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCC
Confidence 455644 589999999998 4678999999999854
No 158
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=67.37 E-value=3.9 Score=38.55 Aligned_cols=41 Identities=29% Similarity=0.689 Sum_probs=28.8
Q ss_pred ccCccCCCCCCCCCeeeecC-CceeeecCCCcccCCC-Ccccc
Q psy2857 241 DINECQSNPCGVNATCIDTQ-GSYSCVCKEHYTGDPY-QACSD 281 (332)
Q Consensus 241 ~~~~C~~~~C~~~~~C~~~~-~~~~C~C~~G~~g~~~-~~C~~ 281 (332)
.+++|....-.....|.+.+ ++|+|.|++||.+... .+|..
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 46777653222346899988 8999999999987543 44543
No 159
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=64.22 E-value=4.8 Score=36.67 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=27.6
Q ss_pred cccccCCC-CCCCCCCeeecC-CCceeeeCCCCCCCCC
Q psy2857 282 IDECKALD-KPCGLRAICENT-VPGFNCLCPKGYSGKP 317 (332)
Q Consensus 282 ~d~C~~~~-~~C~~~~~C~~~-~g~~~C~C~~g~~g~~ 317 (332)
++.|..+. ++|..++.|+.. .+.|.|.|+.||.|+.
T Consensus 18 ~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G 55 (551)
T 3fby_A 18 QRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNG 55 (551)
T ss_dssp CCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSS
T ss_pred cccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCC
Confidence 35565433 689999999876 4567999999999975
No 160
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=62.46 E-value=6.8 Score=33.22 Aligned_cols=39 Identities=23% Similarity=0.508 Sum_probs=24.7
Q ss_pred CccCCCCCCCCCeeeecCC--ceeeecCCCcccCCC-Ccccc
Q psy2857 243 NECQSNPCGVNATCIDTQG--SYSCVCKEHYTGDPY-QACSD 281 (332)
Q Consensus 243 ~~C~~~~C~~~~~C~~~~~--~~~C~C~~G~~g~~~-~~C~~ 281 (332)
++|....-.....|...++ +|+|.|+.||.+... .+|.|
T Consensus 268 n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 268 NPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp CTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred cccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence 4554322122457888766 799999999987643 34444
No 161
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=61.93 E-value=6.1 Score=37.13 Aligned_cols=41 Identities=24% Similarity=0.673 Sum_probs=30.2
Q ss_pred cccccCCCCCCCCCCeeecCC--CceeeeCCCCCCCCCCCCccccc
Q psy2857 282 IDECKALDKPCGLRAICENTV--PGFNCLCPKGYSGKPDAKVACEQ 325 (332)
Q Consensus 282 ~d~C~~~~~~C~~~~~C~~~~--g~~~C~C~~g~~g~~~~~~~c~~ 325 (332)
.++|......|. ..|++.+ ++|.|.|+.||....+.+ +|..
T Consensus 272 ~n~C~~~ng~Cs--~lCl~~~~~~~~~C~C~~g~~l~~d~~-~C~~ 314 (619)
T 3s94_A 272 TNPCGIDNGGCS--HLCLMSPVKPFYQCACPTGVKLLENGK-TCKD 314 (619)
T ss_dssp CCTTTTTGGGCS--SEEEECSSTTSEEEECCTTCCBCTTSS-CBCS
T ss_pred cccccCCCCccc--ceEECCCCCCCceEeCCchheecccCc-ccCC
Confidence 466665445663 6898765 479999999999987765 7864
No 162
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=61.84 E-value=4.1 Score=21.43 Aligned_cols=22 Identities=32% Similarity=0.904 Sum_probs=16.6
Q ss_pred eeecCCCcccCCCCcccccccc
Q psy2857 264 SCVCKEHYTGDPYQACSDIDEC 285 (332)
Q Consensus 264 ~C~C~~G~~g~~~~~C~~~d~C 285 (332)
-|.|++||..+....|...++|
T Consensus 6 GC~C~~G~vrn~~G~CV~~~~C 27 (32)
T 3ssb_I 6 KCYCEDGYARDVNGKCIPIKDC 27 (32)
T ss_dssp EEEECTTEEECTTSCEEEGGGC
T ss_pred CCCcCCCcEECCCCCEECHHHC
Confidence 5899999988765556666666
No 163
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=60.49 E-value=7.4 Score=32.81 Aligned_cols=35 Identities=17% Similarity=0.505 Sum_probs=23.8
Q ss_pred ccCccCCC---CCCCCCeeeecC------CceeeecCCCcccCC
Q psy2857 241 DINECQSN---PCGVNATCIDTQ------GSYSCVCKEHYTGDP 275 (332)
Q Consensus 241 ~~~~C~~~---~C~~~~~C~~~~------~~~~C~C~~G~~g~~ 275 (332)
..++|... .-...+.|.+.+ ++|+|.|+.||.+..
T Consensus 266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~ 309 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAR 309 (316)
T ss_dssp CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECT
T ss_pred ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECC
Confidence 44677644 111236888765 589999999998764
No 164
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=56.65 E-value=22 Score=31.22 Aligned_cols=17 Identities=24% Similarity=0.833 Sum_probs=12.4
Q ss_pred eeecCCCcccCCCCccc
Q psy2857 264 SCVCKEHYTGDPYQACS 280 (332)
Q Consensus 264 ~C~C~~G~~g~~~~~C~ 280 (332)
+|.|..++.|..|+.|.
T Consensus 287 ~C~C~hnT~G~~CErC~ 303 (403)
T 2y38_A 287 QCACQHNTCGGSCDRCC 303 (403)
T ss_dssp EECCCTTEESSSCCEEC
T ss_pred EeECcCcCcCCCCCCCC
Confidence 57888887777776664
No 165
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=48.76 E-value=17 Score=32.00 Aligned_cols=9 Identities=33% Similarity=0.877 Sum_probs=6.3
Q ss_pred CCCCCCCCC
Q psy2857 86 CPKGYSGKP 94 (332)
Q Consensus 86 C~~g~~~~~ 94 (332)
|.+||.+..
T Consensus 374 C~~GYyg~p 382 (403)
T 2y38_A 374 CLPGFFRAP 382 (403)
T ss_dssp ECTTCEECT
T ss_pred CCCCccCCC
Confidence 677777763
No 166
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=45.86 E-value=8.2 Score=35.52 Aligned_cols=61 Identities=23% Similarity=0.612 Sum_probs=34.5
Q ss_pred CCCCCeeeecCCceeeecCCCcccCCCCcccccccccCC-------C---CCCCCCCeeecCCCceeeeCCCCCCCCC
Q psy2857 250 CGVNATCIDTQGSYSCVCKEHYTGDPYQACSDIDECKAL-------D---KPCGLRAICENTVPGFNCLCPKGYSGKP 317 (332)
Q Consensus 250 C~~~~~C~~~~~~~~C~C~~G~~g~~~~~C~~~d~C~~~-------~---~~C~~~~~C~~~~g~~~C~C~~g~~g~~ 317 (332)
|...|......| +|.|.+||..... .|+. |..+ . .+|+.+.. ....|++.|.|..||...+
T Consensus 252 C~~dG~w~~p~G--~C~C~~G~e~~~~-~C~a---C~~g~~k~~~~~~~C~~CP~~S~-s~~~Gs~~C~C~ng~~ra~ 322 (536)
T 3fl7_A 252 CAVDGEWLVPIG--QCLCQAGYEKVED-ACQA---CSPGFFKFEASESPCLECPEHTL-PSPEGATSCECEEGFFRAP 322 (536)
T ss_dssp ECTTSCBCCCBC--CCEECTTEEEETT-EEEE---CCTTEECCSCCSSCCEECCSSEE-CCCTTCSSCEECTTCBCCT
T ss_pred EcCCCCEecccC--cEeccCccccCCc-eeee---cCCCCCcccCCCCccccCCCCCC-CCCCCccEEEEeccccccC
Confidence 445555544444 8999999974332 2332 2111 1 13443332 2456889999999987554
No 167
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=42.34 E-value=17 Score=29.97 Aligned_cols=28 Identities=32% Similarity=0.819 Sum_probs=22.8
Q ss_pred CCCCCCeeecCCCceeeeCCCCCCCCCCCC
Q psy2857 291 PCGLRAICENTVPGFNCLCPKGYSGKPDAK 320 (332)
Q Consensus 291 ~C~~~~~C~~~~g~~~C~C~~g~~g~~~~~ 320 (332)
.|. ..|.+..+++.|.|.+||.+..+..
T Consensus 133 ~c~--~~C~n~~g~~~C~C~~Gy~l~~d~~ 160 (278)
T 3dem_A 133 SCD--HYCHNYIGGYYCSCRFGYILHTDNR 160 (278)
T ss_dssp CCS--SEEEEETTEEEEECCTTCEECTTSS
T ss_pred cCC--cCcCCccCCcEEEeCCcceeccCCC
Confidence 464 5699999999999999998876543
No 168
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=37.07 E-value=12 Score=22.38 Aligned_cols=21 Identities=24% Similarity=0.559 Sum_probs=13.9
Q ss_pred eeecCCCcccCCCCccccccc
Q psy2857 264 SCVCKEHYTGDPYQACSDIDE 284 (332)
Q Consensus 264 ~C~C~~G~~g~~~~~C~~~d~ 284 (332)
-|.|++||..+....|..+++
T Consensus 35 GC~C~~G~v~~~~g~CV~~~~ 55 (56)
T 1ccv_A 35 GCQCQEGFLRNGEGACVLPEN 55 (56)
T ss_dssp EEEECTTCEEETTTEEECGGG
T ss_pred CCcCCCCeeECCCCcccChhh
Confidence 499999998865334544443
No 169
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=35.90 E-value=26 Score=34.54 Aligned_cols=37 Identities=24% Similarity=0.527 Sum_probs=30.7
Q ss_pred ccCccCCCCCCCCCeeeecCCceeeecCCCcccCCCC
Q psy2857 241 DINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQ 277 (332)
Q Consensus 241 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~ 277 (332)
+.+.|.-.||.+++.++.......|.|++||.|..|+
T Consensus 496 e~~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce 532 (913)
T 3t5o_A 496 KFDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCE 532 (913)
T ss_dssp TTCGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSC
T ss_pred ccccccCCCCCCCCEeecCCCceEEEccCCccccCcc
Confidence 3455655689999999988888999999999998764
No 170
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=29.23 E-value=24 Score=29.21 Aligned_cols=25 Identities=24% Similarity=0.640 Sum_probs=21.6
Q ss_pred CeeecCCCceeeeCCCCCCCCCCCC
Q psy2857 296 AICENTVPGFNCLCPKGYSGKPDAK 320 (332)
Q Consensus 296 ~~C~~~~g~~~C~C~~g~~g~~~~~ 320 (332)
..|.+..++|.|.|.+||.+..+..
T Consensus 135 ~~C~n~~g~~~csC~~Gy~L~~d~~ 159 (286)
T 1nt0_A 135 HYCHXYLGGYYCSCRVGYILHQNKH 159 (286)
T ss_dssp SEEEEETTEEEEECCTTEEECTTSS
T ss_pred CccccccCceEeecCCCceeccCCC
Confidence 5799999999999999998887644
No 171
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=27.71 E-value=27 Score=32.08 Aligned_cols=65 Identities=23% Similarity=0.459 Sum_probs=33.2
Q ss_pred CCCCCeeeeCCCCeEeeCCCCCccC--CCCCCCCcccc-cCCCC---CCCCCCceeeCCCCeeeeCCCCCCCCC
Q psy2857 27 CGVNATCIDTQGSYSCVCKEHYTGD--PYQACSDIDEC-KALDK---PCGLRAICENTVPGFNCLCPKGYSGKP 94 (332)
Q Consensus 27 C~~~g~C~~~~g~~~C~C~~G~~g~--~~~~C~~~~~c-~~~~~---~C~~~~~C~~~~~~~~C~C~~g~~~~~ 94 (332)
|+..|..... ...|+|.+||... .|+.|..-..- ..... +|..++. ....|.+.|.|..||....
T Consensus 252 C~~dG~w~~p--~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~-s~~~Gs~~C~C~ng~~ra~ 322 (536)
T 3fl7_A 252 CAVDGEWLVP--IGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTL-PSPEGATSCECEEGFFRAP 322 (536)
T ss_dssp ECTTSCBCCC--BCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEE-CCCTTCSSCEECTTCBCCT
T ss_pred EcCCCCEecc--cCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCC-CCCCCccEEEEeccccccC
Confidence 5555554332 2379999999743 22333221000 00011 2322222 2345789999999997553
No 172
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=27.48 E-value=9 Score=33.34 Aligned_cols=25 Identities=28% Similarity=0.695 Sum_probs=20.6
Q ss_pred CCCCCCCCeeeeCCCCeEeeCCCCCccCC
Q psy2857 24 SNPCGVNATCIDTQGSYSCVCKEHYTGDP 52 (332)
Q Consensus 24 ~~~C~~~g~C~~~~g~~~C~C~~G~~g~~ 52 (332)
++.|+.||.|.+. .|.|.+||.|..
T Consensus 195 p~~CsGhG~C~~g----~C~Cd~G~~g~d 219 (387)
T 2ddu_A 195 PSYCSGHGDCISG----VCFCDLGYTAAQ 219 (387)
T ss_dssp GGGGGGSEEEETT----EEEECTTEEEET
T ss_pred ccccCCCceecCC----eEEecCCcccCC
Confidence 3469999999874 599999999853
No 173
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=25.52 E-value=23 Score=22.89 Aligned_cols=23 Identities=35% Similarity=0.904 Sum_probs=17.2
Q ss_pred eeecCCCcccCCC-Cccccccccc
Q psy2857 264 SCVCKEHYTGDPY-QACSDIDECK 286 (332)
Q Consensus 264 ~C~C~~G~~g~~~-~~C~~~d~C~ 286 (332)
-|.|++||..+.. ..|...++|.
T Consensus 48 GC~C~~G~vr~~~~g~CV~~~~Cp 71 (78)
T 2p3f_N 48 ACVCKDGFYRDTVIGDCVREEECD 71 (78)
T ss_dssp EEEECSSCEEETTTTEEECGGGCC
T ss_pred CcCcCCCEeEcCCCCceECHHHCC
Confidence 5999999988754 5577666663
No 174
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=25.16 E-value=43 Score=33.02 Aligned_cols=37 Identities=24% Similarity=0.527 Sum_probs=29.9
Q ss_pred cCCcCCCCCCCCCCeeeeCCCCeEeeCCCCCccCCCC
Q psy2857 18 DINECQSNPCGVNATCIDTQGSYSCVCKEHYTGDPYQ 54 (332)
Q Consensus 18 ~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~ 54 (332)
+.+.|.-.||.+++.++.......|.|.+||.|..++
T Consensus 496 e~~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce 532 (913)
T 3t5o_A 496 KFDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCE 532 (913)
T ss_dssp TTCGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSC
T ss_pred ccccccCCCCCCCCEeecCCCceEEEccCCccccCcc
Confidence 3455655689999999987778889999999997663
No 175
>2h9e_C Anti-coagulant protein C2; factor XA, NAPC2, hydrolase-hydrolase inhibitor C blood clotting; HET: DTY; 2.20A {Ancylostoma caninum} SCOP: g.22.1.1 PDB: 1cou_A
Probab=23.46 E-value=22 Score=23.43 Aligned_cols=23 Identities=26% Similarity=0.871 Sum_probs=17.2
Q ss_pred eeecCCCcccCCCCccccccccc
Q psy2857 264 SCVCKEHYTGDPYQACSDIDECK 286 (332)
Q Consensus 264 ~C~C~~G~~g~~~~~C~~~d~C~ 286 (332)
-|.|++||..+....|..+++|.
T Consensus 49 GC~C~~G~vr~~~g~CV~~~~Cp 71 (84)
T 2h9e_C 49 DCVCEEGFYRNKDDKCVSAEDCE 71 (84)
T ss_dssp -CEECSSCEECTTCCEECHHHHG
T ss_pred CCCCCCCeEEcCCCCEECHHHCC
Confidence 59999999987555677777773
No 176
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=22.99 E-value=42 Score=20.17 Aligned_cols=19 Identities=16% Similarity=0.406 Sum_probs=12.0
Q ss_pred eeecCCC--cccCCCCccccc
Q psy2857 264 SCVCKEH--YTGDPYQACSDI 282 (332)
Q Consensus 264 ~C~C~~G--~~g~~~~~C~~~ 282 (332)
-|.|++| |..+....|...
T Consensus 37 GC~C~~Gtv~v~~~~~~CV~~ 57 (60)
T 1hx2_A 37 RCGCISGTVLKSKDSSECVHP 57 (60)
T ss_dssp EEEECTTCEESSTTCSSEECT
T ss_pred CCCCCCCCeeEECCCCCEech
Confidence 5999999 776533334433
No 177
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=20.12 E-value=53 Score=27.07 Aligned_cols=23 Identities=26% Similarity=0.573 Sum_probs=20.1
Q ss_pred CeeeecCCceeeecCCCcccCCC
Q psy2857 254 ATCIDTQGSYSCVCKEHYTGDPY 276 (332)
Q Consensus 254 ~~C~~~~~~~~C~C~~G~~g~~~ 276 (332)
..|.+..++|.|.|.+||.+...
T Consensus 135 ~~C~n~~g~~~csC~~Gy~L~~d 157 (286)
T 1nt0_A 135 HYCHXYLGGYYCSCRVGYILHQN 157 (286)
T ss_dssp SEEEEETTEEEEECCTTEEECTT
T ss_pred CccccccCceEeecCCCceeccC
Confidence 57999999999999999988753
No 178
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=20.09 E-value=1e+02 Score=19.35 Aligned_cols=26 Identities=27% Similarity=0.765 Sum_probs=20.5
Q ss_pred CcCCCCCCCCCCeeeeC-CCCeEeeCC
Q psy2857 20 NECQSNPCGVNATCIDT-QGSYSCVCK 45 (332)
Q Consensus 20 ~~C~~~~C~~~g~C~~~-~g~~~C~C~ 45 (332)
++|....|+.+..|+.. .+...|.|.
T Consensus 2 ~~C~~~~C~~g~~C~~~~~~~~~C~C~ 28 (74)
T 1lr7_A 2 ETCENVDCGPGKKCRMNKKNKPRCVCA 28 (74)
T ss_dssp CCSTTCCCCTTEEEEECTTSCEEEEEC
T ss_pred CCCCCCcCcCCCEEeECCCCCeeecCC
Confidence 67888889999999984 455678874
Done!