Query psy2859
Match_columns 534
No_of_seqs 578 out of 4989
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 18:41:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 6.2E-32 2.1E-36 243.1 18.7 156 5-172 3-158 (169)
2 2rfa_A Transient receptor pote 100.0 5.1E-28 1.7E-32 229.2 18.5 180 6-196 3-222 (232)
3 3v31_A Ankyrin repeat family A 100.0 1.1E-27 3.7E-32 215.0 19.4 156 5-172 2-157 (167)
4 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.2E-27 4.1E-32 215.3 19.7 155 6-172 14-168 (169)
5 3v30_A DNA-binding protein rfx 100.0 6.2E-28 2.1E-32 217.7 17.7 156 6-172 2-157 (172)
6 3hra_A Ankyrin repeat family p 100.0 8.6E-28 3E-32 222.3 18.4 178 4-192 3-199 (201)
7 1bd8_A P19INK4D CDK4/6 inhibit 100.0 9.5E-28 3.2E-32 212.7 17.9 154 6-172 2-155 (156)
8 2xai_A ASB-9, ankyrin repeat a 100.0 5E-27 1.7E-31 226.8 23.6 176 6-194 3-189 (261)
9 4b93_B Ankyrin repeat domain-c 100.0 3.7E-28 1.3E-32 235.8 14.9 165 7-182 53-229 (269)
10 1ihb_A P18-INK4C(INK6), cyclin 100.0 9.4E-28 3.2E-32 214.1 16.4 156 5-172 4-159 (162)
11 1awc_B Protein (GA binding pro 100.0 2.3E-27 8E-32 209.7 18.7 150 7-169 3-152 (153)
12 2f8y_A Notch homolog 1, transl 100.0 2.4E-27 8.3E-32 223.0 19.4 178 7-196 26-216 (223)
13 2rfm_A Putative ankyrin repeat 100.0 1.9E-27 6.5E-32 218.6 17.8 155 6-172 35-189 (192)
14 3aji_A 26S proteasome non-ATPa 100.0 3.2E-27 1.1E-31 223.5 19.6 181 3-194 3-195 (231)
15 3aji_A 26S proteasome non-ATPa 100.0 3.2E-27 1.1E-31 223.5 19.6 176 6-193 40-227 (231)
16 3twr_A Tankyrase-2; ankyrin re 100.0 9.9E-28 3.4E-32 214.8 15.0 157 4-172 6-162 (165)
17 1oy3_D Transcription factor in 100.0 1.3E-27 4.3E-32 233.0 16.7 180 4-194 6-248 (282)
18 1yyh_A HN1;, notch 1, ankyrin 99.9 1.9E-27 6.6E-32 228.6 17.4 177 4-192 54-244 (253)
19 3f6q_A Integrin-linked protein 99.9 1.8E-27 6.2E-32 216.2 16.1 157 5-172 4-160 (179)
20 1s70_B 130 kDa myosin-binding 99.9 1.7E-26 5.7E-31 227.4 21.8 187 6-194 40-255 (299)
21 3d9h_A CDNA FLJ77766, highly s 99.9 2E-26 6.9E-31 225.6 21.6 175 7-194 60-245 (285)
22 1k1a_A B-cell lymphoma 3-encod 99.9 2.2E-26 7.5E-31 218.9 20.3 178 6-194 9-206 (241)
23 3utm_A Tankyrase-1; tankyrase, 99.9 1.2E-26 4.1E-31 233.3 19.4 130 6-136 24-153 (351)
24 3b7b_A Euchromatic histone-lys 99.9 3.7E-26 1.3E-30 217.0 20.8 176 6-193 11-199 (237)
25 1k1a_A B-cell lymphoma 3-encod 99.9 2.5E-26 8.5E-31 218.6 18.8 175 7-193 47-238 (241)
26 4gpm_A Engineered protein OR26 99.9 1.5E-26 5E-31 208.0 15.7 129 4-134 34-163 (169)
27 1yyh_A HN1;, notch 1, ankyrin 99.9 8.3E-27 2.9E-31 224.2 15.0 165 19-194 35-213 (253)
28 3kea_A K1L; tropism, ANK repea 99.9 6.3E-27 2.2E-31 229.2 14.2 172 7-193 32-217 (285)
29 2etb_A Transient receptor pote 99.9 6.4E-27 2.2E-31 225.2 13.5 180 6-195 2-245 (256)
30 2dzn_A Probable 26S proteasome 99.9 4E-26 1.4E-30 215.3 18.6 176 6-191 2-194 (228)
31 1ikn_D Protein (I-kappa-B-alph 99.9 2.9E-27 9.8E-32 224.8 10.2 181 4-195 5-208 (236)
32 2dzn_A Probable 26S proteasome 99.9 9.3E-26 3.2E-30 212.8 20.3 157 4-172 33-197 (228)
33 2xai_A ASB-9, ankyrin repeat a 99.9 6.1E-26 2.1E-30 219.2 19.4 153 6-172 36-188 (261)
34 3b7b_A Euchromatic histone-lys 99.9 1.4E-25 4.7E-30 213.0 20.6 172 7-190 45-229 (237)
35 2rfa_A Transient receptor pote 99.9 5E-26 1.7E-30 215.4 17.4 161 6-172 37-219 (232)
36 3hra_A Ankyrin repeat family p 99.9 6.6E-26 2.3E-30 209.6 17.4 154 7-172 40-200 (201)
37 3d9h_A CDNA FLJ77766, highly s 99.9 1.4E-25 4.9E-30 219.6 19.9 171 7-193 93-275 (285)
38 2etb_A Transient receptor pote 99.9 1.5E-26 5.2E-31 222.6 12.3 164 4-172 40-243 (256)
39 2f8y_A Notch homolog 1, transl 99.9 2.6E-25 8.9E-30 209.1 20.2 156 6-172 58-213 (223)
40 1oy3_D Transcription factor in 99.9 6.7E-26 2.3E-30 220.8 16.5 157 6-174 45-249 (282)
41 3t8k_A Uncharacterized protein 99.9 2E-26 6.9E-31 210.5 11.9 152 7-172 7-176 (186)
42 4b93_B Ankyrin repeat domain-c 99.9 2.6E-26 8.8E-31 222.8 13.3 152 4-169 83-235 (269)
43 3ljn_A Hypothetical protein; a 99.9 3.2E-26 1.1E-30 232.2 14.6 197 7-221 21-267 (364)
44 3eu9_A Huntingtin-interacting 99.9 3.6E-25 1.2E-29 210.0 20.1 177 6-193 9-199 (240)
45 4hbd_A KN motif and ankyrin re 99.9 8.6E-26 2.9E-30 220.1 15.9 155 6-172 111-272 (276)
46 1ikn_D Protein (I-kappa-B-alph 99.9 5.3E-26 1.8E-30 216.0 14.0 156 7-174 46-208 (236)
47 1wdy_A 2-5A-dependent ribonucl 99.9 1.4E-25 4.9E-30 218.4 17.0 185 7-193 6-208 (285)
48 1d9s_A Cyclin-dependent kinase 99.9 6.7E-26 2.3E-30 196.1 12.9 131 30-172 2-133 (136)
49 3jxi_A Vanilloid receptor-rela 99.9 5.3E-26 1.8E-30 219.2 13.2 163 5-172 44-247 (260)
50 2pnn_A Transient receptor pote 99.9 5.2E-26 1.8E-30 221.1 13.0 181 6-196 13-258 (273)
51 1n11_A Ankyrin; clathrin, BAND 99.9 3.6E-25 1.2E-29 230.1 19.8 176 6-193 14-201 (437)
52 2fo1_E LIN-12 protein; beta-ba 99.9 7.8E-26 2.7E-30 230.2 13.9 185 6-193 125-335 (373)
53 3jxi_A Vanilloid receptor-rela 99.9 7.1E-26 2.4E-30 218.3 12.5 180 6-196 5-250 (260)
54 2pnn_A Transient receptor pote 99.9 7.9E-26 2.7E-30 219.8 12.6 164 4-172 51-255 (273)
55 1wdy_A 2-5A-dependent ribonucl 99.9 6.5E-25 2.2E-29 213.7 18.7 173 8-192 41-240 (285)
56 3kea_A K1L; tropism, ANK repea 99.9 1.2E-25 4.3E-30 220.0 13.1 179 6-197 62-247 (285)
57 3utm_A Tankyrase-1; tankyrase, 99.9 1.1E-24 3.7E-29 219.0 20.3 176 7-194 59-303 (351)
58 2fo1_E LIN-12 protein; beta-ba 99.9 2.1E-25 7.2E-30 227.0 14.2 176 6-193 166-368 (373)
59 3ljn_A Hypothetical protein; a 99.9 4.2E-25 1.4E-29 224.0 16.0 126 36-172 134-266 (364)
60 2rfm_A Putative ankyrin repeat 99.9 3.4E-25 1.2E-29 203.5 13.2 151 32-193 27-189 (192)
61 2vge_A RELA-associated inhibit 99.9 1.5E-26 5.2E-31 218.9 4.3 160 8-169 23-207 (229)
62 1n11_A Ankyrin; clathrin, BAND 99.9 1.9E-24 6.7E-29 224.6 19.9 182 9-192 149-365 (437)
63 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.8E-25 6.3E-30 212.9 10.8 155 6-172 4-161 (239)
64 4g8k_A 2-5A-dependent ribonucl 99.9 2.1E-24 7.3E-29 216.3 18.9 175 8-194 127-324 (337)
65 4g8k_A 2-5A-dependent ribonucl 99.9 2.4E-24 8.2E-29 216.0 18.5 164 7-172 26-190 (337)
66 1sw6_A Regulatory protein SWI6 99.9 2.5E-25 8.5E-30 222.3 11.1 162 10-172 100-305 (327)
67 4hbd_A KN motif and ankyrin re 99.9 2.8E-25 9.6E-30 216.4 10.2 173 9-193 79-272 (276)
68 3v31_A Ankyrin repeat family A 99.9 2.4E-24 8E-29 193.1 15.1 147 39-196 2-160 (167)
69 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-24 3.9E-29 193.1 11.5 140 4-156 10-150 (156)
70 2jab_A H10-2-G3; HER2, darpin, 99.9 4.2E-24 1.5E-28 184.7 13.5 123 38-171 12-134 (136)
71 1d9s_A Cyclin-dependent kinase 99.9 2E-24 6.9E-29 186.8 11.4 124 6-132 12-136 (136)
72 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-23 4E-28 182.0 15.8 123 6-130 14-136 (136)
73 3c5r_A BARD-1, BRCA1-associate 99.9 1.2E-24 4.2E-29 188.3 9.1 131 30-172 1-131 (137)
74 2y1l_E Darpin-8.4; hydrolase-i 99.9 9.3E-24 3.2E-28 189.8 13.7 145 37-192 11-167 (169)
75 1s70_B 130 kDa myosin-binding 99.9 1.1E-23 3.9E-28 207.1 15.3 172 7-190 74-284 (299)
76 3eu9_A Huntingtin-interacting 99.9 4.3E-23 1.5E-27 195.6 18.1 178 7-196 43-235 (240)
77 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.7E-23 1.3E-27 175.6 15.0 121 40-171 2-122 (126)
78 2b0o_E UPLC1; arfgap, structur 99.9 1.2E-23 4E-28 207.3 12.9 140 6-163 151-299 (301)
79 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-23 4.6E-28 187.0 11.8 143 39-193 4-159 (162)
80 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.7E-23 3E-27 173.2 16.1 125 6-132 2-126 (126)
81 3v30_A DNA-binding protein rfx 99.9 3.3E-23 1.1E-27 186.6 13.5 128 6-135 36-163 (172)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-23 3.7E-28 186.7 10.0 127 34-172 6-133 (156)
83 3f6q_A Integrin-linked protein 99.9 9.3E-23 3.2E-27 185.0 16.3 145 38-193 3-160 (179)
84 1awc_B Protein (GA binding pro 99.9 3.7E-23 1.3E-27 182.6 13.2 139 40-190 2-152 (153)
85 3deo_A Signal recognition part 99.9 7E-23 2.4E-27 186.6 15.4 136 7-172 45-181 (183)
86 3ui2_A Signal recognition part 99.9 6.8E-23 2.3E-27 195.7 14.5 136 7-172 46-182 (244)
87 2vge_A RELA-associated inhibit 99.9 2.2E-23 7.4E-28 197.2 10.9 138 25-172 3-145 (229)
88 3twr_A Tankyrase-2; ankyrin re 99.9 7.9E-23 2.7E-27 182.7 13.5 145 36-192 4-161 (165)
89 3aaa_C Myotrophin, protein V-1 99.9 1.2E-22 4.2E-27 172.2 12.8 116 5-122 6-121 (123)
90 1sw6_A Regulatory protein SWI6 99.9 1.4E-23 4.8E-28 209.6 7.9 146 4-161 128-327 (327)
91 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-23 4.5E-28 200.0 6.2 153 7-162 38-193 (239)
92 3aaa_C Myotrophin, protein V-1 99.9 7.2E-23 2.5E-27 173.7 10.0 113 37-160 4-116 (123)
93 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.4E-22 4.9E-27 179.2 12.3 141 40-192 2-154 (156)
94 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-22 5.4E-27 175.0 10.3 124 6-131 10-133 (137)
95 3ehr_A Osteoclast-stimulating 99.9 3.4E-22 1.2E-26 187.9 11.9 129 7-137 74-203 (222)
96 3t8k_A Uncharacterized protein 99.9 9.8E-23 3.4E-27 186.0 7.1 128 7-135 39-182 (186)
97 3ehr_A Osteoclast-stimulating 99.9 1.4E-22 4.7E-27 190.6 7.5 126 36-172 69-195 (222)
98 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.1E-21 3.7E-26 157.6 11.8 93 39-132 1-93 (93)
99 3lvq_E ARF-GAP with SH3 domain 99.9 1.1E-21 3.8E-26 207.0 15.2 128 6-135 132-268 (497)
100 3deo_A Signal recognition part 99.9 1.5E-22 5E-27 184.5 6.7 139 37-192 41-180 (183)
101 1dcq_A PYK2-associated protein 99.9 3.3E-21 1.1E-25 187.6 14.9 124 8-133 132-264 (278)
102 3jue_A Arfgap with coiled-coil 99.8 4.1E-21 1.4E-25 193.6 13.9 143 8-159 201-346 (368)
103 3ui2_A Signal recognition part 99.8 3E-21 1E-25 184.3 9.6 142 37-195 42-184 (244)
104 2b0o_E UPLC1; arfgap, structur 99.8 3.7E-20 1.3E-24 182.2 14.4 133 41-183 152-298 (301)
105 2aja_A Ankyrin repeat family p 99.8 3.8E-22 1.3E-26 201.9 -1.0 144 41-194 93-248 (376)
106 3jue_A Arfgap with coiled-coil 99.8 3.5E-20 1.2E-24 186.8 13.2 124 38-172 197-323 (368)
107 2l6b_A NR1C; ankyrin, consensu 99.8 1.3E-20 4.3E-25 157.6 8.1 101 35-136 4-104 (115)
108 1dcq_A PYK2-associated protein 99.8 3.5E-19 1.2E-23 173.2 18.9 122 41-172 131-260 (278)
109 2aja_A Ankyrin repeat family p 99.8 2.2E-21 7.5E-26 196.3 1.1 145 8-172 94-247 (376)
110 3lvq_E ARF-GAP with SH3 domain 99.8 2.1E-19 7.3E-24 189.6 13.6 122 40-172 132-262 (497)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7E-19 2.4E-23 141.0 12.7 92 6-99 2-93 (93)
112 2zgd_A 3 repeat synthetic anky 99.8 9E-19 3.1E-23 145.2 9.9 93 33-126 17-109 (110)
113 2l6b_A NR1C; ankyrin, consensu 99.8 2.7E-19 9.2E-24 149.5 6.3 104 6-111 9-112 (115)
114 2zgd_A 3 repeat synthetic anky 99.7 5.3E-16 1.8E-20 128.4 11.5 86 6-93 24-109 (110)
115 2d8q_A BLU protein, zinc finge 99.3 7.3E-12 2.5E-16 92.5 7.8 46 426-472 15-60 (70)
116 2odd_A Protein CBFA2T1; MYND z 99.3 1.4E-12 5E-17 95.3 3.7 60 402-472 3-62 (64)
117 2dj8_A Protein CBFA2T1; zinc f 99.2 1.5E-11 5.1E-16 88.4 4.8 45 425-470 14-58 (60)
118 2od1_A Protein CBFA2T1; zinc f 99.2 1.2E-11 4.2E-16 88.8 4.1 45 426-471 13-57 (60)
119 2jw6_A Deformed epidermal auto 99.1 4.5E-11 1.5E-15 83.5 2.4 41 427-468 10-50 (52)
120 2d8q_A BLU protein, zinc finge 99.0 9.5E-10 3.2E-14 81.2 6.0 48 323-371 12-59 (70)
121 2od1_A Protein CBFA2T1; zinc f 98.9 1.9E-09 6.4E-14 77.3 4.7 46 324-370 11-56 (60)
122 2dj8_A Protein CBFA2T1; zinc f 98.8 2.4E-09 8.3E-14 76.8 4.8 45 324-369 13-57 (60)
123 3n71_A Histone lysine methyltr 98.8 4.1E-11 1.4E-15 124.9 -7.9 74 398-472 22-96 (490)
124 2odd_A Protein CBFA2T1; MYND z 98.8 3.3E-09 1.1E-13 77.3 4.4 46 325-371 16-61 (64)
125 3qww_A SET and MYND domain-con 98.8 9.4E-10 3.2E-14 112.8 1.3 74 398-472 22-96 (433)
126 3qwp_A SET and MYND domain-con 98.8 2.2E-09 7.7E-14 110.2 3.4 74 398-472 20-94 (429)
127 2jw6_A Deformed epidermal auto 98.7 1E-08 3.5E-13 71.4 3.9 41 326-367 9-49 (52)
128 3qww_A SET and MYND domain-con 97.6 3.1E-05 1.1E-09 79.1 3.4 46 326-371 49-95 (433)
129 3qwp_A SET and MYND domain-con 97.5 4E-05 1.4E-09 78.4 2.9 46 326-371 47-93 (429)
130 3n71_A Histone lysine methyltr 97.3 7.9E-05 2.7E-09 77.4 3.1 46 326-371 49-95 (490)
131 2yqq_A Zinc finger HIT domain- 96.8 0.0016 5.5E-08 44.7 4.7 38 426-469 12-49 (56)
132 1x4s_A Protein FON, zinc finge 94.0 0.03 1E-06 38.7 2.4 35 427-467 12-49 (59)
133 2yqq_A Zinc finger HIT domain- 92.0 0.18 6E-06 34.6 4.0 38 324-367 10-47 (56)
134 1x4s_A Protein FON, zinc finge 85.7 0.3 1E-05 33.7 1.5 32 326-358 11-45 (59)
135 1wg2_A Zinc finger (AN1-like) 77.7 1.9 6.4E-05 30.3 3.1 27 425-453 14-42 (64)
136 1wfp_A Zinc finger (AN1-like) 77.2 1.9 6.5E-05 31.1 3.1 26 426-453 25-52 (74)
137 2yqp_A Probable ATP-dependent 76.3 5.9 0.0002 26.8 5.0 41 419-461 12-52 (60)
138 1x4w_A Hypothetical protein FL 73.3 2.6 9E-05 29.9 2.9 26 426-453 15-45 (67)
139 1wfh_A Zinc finger (AN1-like) 70.3 3.4 0.00012 28.9 2.9 26 426-453 15-42 (64)
140 1wff_A Riken cDNA 2810002D23 p 62.3 9.6 0.00033 28.4 4.2 26 426-453 25-53 (85)
141 1lv3_A Hypothetical protein YA 61.0 5.1 0.00017 28.5 2.4 31 427-459 10-40 (68)
142 1wfl_A Zinc finger protein 216 46.4 11 0.00038 27.1 2.2 26 426-453 25-52 (74)
143 2l8e_A Polyhomeotic-like prote 42.4 13 0.00045 24.5 2.0 29 427-457 19-47 (49)
144 1mm2_A MI2-beta; PHD, zinc fin 35.2 41 0.0014 23.1 3.7 22 426-447 9-30 (61)
145 2yql_A PHD finger protein 21A; 31.4 36 0.0012 22.9 2.9 24 424-447 7-30 (56)
146 1wfk_A Zinc finger, FYVE domai 29.8 32 0.0011 25.8 2.6 27 425-452 8-38 (88)
147 1z2q_A LM5-1; membrane protein 29.6 51 0.0017 24.3 3.7 26 426-452 21-50 (84)
148 2gmg_A Hypothetical protein PF 29.6 34 0.0012 26.5 2.7 22 427-448 68-94 (105)
149 3c5k_A HD6, histone deacetylas 24.5 39 0.0013 26.5 2.3 35 326-361 24-61 (109)
150 3j20_Y 30S ribosomal protein S 23.5 31 0.0011 22.8 1.3 23 427-449 20-48 (50)
151 1y02_A CARP2, FYVE-ring finger 22.3 36 0.0012 27.3 1.7 25 427-452 20-48 (120)
152 2lri_C Autoimmune regulator; Z 22.2 64 0.0022 22.6 2.8 21 427-447 13-33 (66)
153 3w0f_A Endonuclease 8-like 3; 21.9 19 0.00065 33.7 -0.0 34 428-462 253-287 (287)
154 4g26_A Pentatricopeptide repea 21.2 1.4E+02 0.0048 30.3 6.4 138 13-172 36-200 (501)
155 3c5k_A HD6, histone deacetylas 21.2 74 0.0025 24.9 3.3 34 427-462 25-58 (109)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.2e-32 Score=243.10 Aligned_cols=156 Identities=29% Similarity=0.371 Sum_probs=147.9
Q ss_pred CCchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHc
Q psy2859 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALS 84 (534)
Q Consensus 5 ~~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~ 84 (534)
.-|+.|+.||..|+.+.|+.||.. |+++|.+|..|+||||+|+..++.+++++|++.|++++. .|..|+||||+|+..
T Consensus 3 dlg~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~-~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 3 ELGKRLIEAAENGNKDRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh-hccCCCCHHHHHHHc
Confidence 346789999999999999887765 999999999999999999999999999999999999999 899999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCch
Q psy2859 85 GKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIH 164 (534)
Q Consensus 85 g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 164 (534)
|+.++|++||++|+++|.+|..|+||||+|+..|+.+++++|++.|++++. .|..|.||||+|+..|+.+
T Consensus 81 g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~----------~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 81 GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT----------SDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc----------cCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999843 4778999999999999999
Q ss_pred HHHHHHhh
Q psy2859 165 PVRVALNL 172 (534)
Q Consensus 165 ~v~~Ll~~ 172 (534)
++++|+++
T Consensus 151 iv~~Ll~~ 158 (169)
T 4gpm_A 151 VVKLLEKQ 158 (169)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHC
Confidence 99999987
No 2
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=5.1e-28 Score=229.21 Aligned_cols=180 Identities=22% Similarity=0.244 Sum_probs=160.4
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-----CCCCCCCCchHHHH
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADV-----NSGRHEHGYSALHF 80 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~v-----n~~~~~~G~TpLh~ 80 (534)
+.++||.||..|+.+.++.||...|+++|.+|..|+||||+|+..|+.++|++|+++|+++ +. .+..|.||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTS-ELYEGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCS-TTTTTCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccc-cCCCCcCHHHH
Confidence 4578889999999999999988889999999999999999999999999999999999987 55 67899999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCC-------------CCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCC
Q psy2859 81 AALSGKDDVCACLLSAGAKSYATNS-------------VGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLD 147 (534)
Q Consensus 81 A~~~g~~~iv~~Ll~~ga~~~~~~~-------------~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~ 147 (534)
|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++.|++++. .|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----------~d 151 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA----------QD 151 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC----------CC
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----------CC
Confidence 9999999999999999999988765 799999999999999999999999999843 47
Q ss_pred CCCCchHHHHHHhcCchHH----HHHHhh------------------CCcccccccchHHHHHHHHHhhhh
Q psy2859 148 PILAEPLHTFIMQVNIHPV----RVALNL------------------LPSLISHLPSVRKVVSLLSEKQMK 196 (534)
Q Consensus 148 ~~g~t~L~~A~~~~~~~~v----~~Ll~~------------------~p~~~~~~~~~~~~~~~l~~~~~~ 196 (534)
..|.||||+|+..++.+++ ++|+++ +|++++...+..++++.|.+++..
T Consensus 152 ~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 152 SLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp TTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 7899999999999999988 888764 456667777778888888776543
No 3
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.1e-27 Score=214.99 Aligned_cols=156 Identities=19% Similarity=0.169 Sum_probs=147.3
Q ss_pred CCchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHc
Q psy2859 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALS 84 (534)
Q Consensus 5 ~~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~ 84 (534)
.+.++++.||..|+.+.+..+|.. |.++|..|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHc
Confidence 356789999999999999888877 899999999999999999999999999999999999999 899999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCch
Q psy2859 85 GKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIH 164 (534)
Q Consensus 85 g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 164 (534)
|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|++++. .+..|.|||++|+..|+.+
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------~~~~g~t~l~~A~~~~~~~ 149 (167)
T 3v31_A 80 GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI----------ETDSGYNSMDLAVALGYRS 149 (167)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----------cCCCCCCHHHHHHHcCcHH
Confidence 999999999999999999999999999999999999999999999999743 4778999999999999999
Q ss_pred HHHHHHhh
Q psy2859 165 PVRVALNL 172 (534)
Q Consensus 165 ~v~~Ll~~ 172 (534)
++++|+++
T Consensus 150 ~~~~L~~~ 157 (167)
T 3v31_A 150 VQQVIESH 157 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999987
No 4
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.2e-27 Score=215.31 Aligned_cols=155 Identities=28% Similarity=0.360 Sum_probs=144.6
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
..++++.||..|+.+.|+.||.. |+++|.+|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-VDHAGMTPLRLAALFG 91 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred ccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcC
Confidence 35678888999998888777665 999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++..|..|.||||+|+..++.+++++|++.|++++. .+..|.|||++|+..|+.++
T Consensus 92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------~~~~g~t~l~~A~~~~~~~~ 161 (169)
T 2y1l_E 92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA----------QDKFGKTAFDISIDNGNEDL 161 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----------cCCCCCCHHHHHHHhCCHHH
Confidence 99999999999999999999999999999999999999999999999743 46789999999999999999
Q ss_pred HHHHHhh
Q psy2859 166 VRVALNL 172 (534)
Q Consensus 166 v~~Ll~~ 172 (534)
+++|+++
T Consensus 162 ~~~L~~~ 168 (169)
T 2y1l_E 162 AEILQKL 168 (169)
T ss_dssp HHHHHTC
T ss_pred HHHHHHc
Confidence 9999864
No 5
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=6.2e-28 Score=217.67 Aligned_cols=156 Identities=21% Similarity=0.172 Sum_probs=146.0
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.||..|+.+.++.+|...+..++..|..|+||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHHHHHHHCC
Confidence 457899999999999999999885555899999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|++++. .+..|.||||+|+..|+.++
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~t~l~~A~~~~~~~~ 150 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT----------EADSGYTPMDLAVALGYRKV 150 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc----------cCCCCCCHHHHHHHhCcHHH
Confidence 99999999999999999999999999999999999999999999999743 46789999999999999999
Q ss_pred HHHHHhh
Q psy2859 166 VRVALNL 172 (534)
Q Consensus 166 v~~Ll~~ 172 (534)
+++|+++
T Consensus 151 ~~~L~~~ 157 (172)
T 3v30_A 151 QQVIENH 157 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999987
No 6
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=8.6e-28 Score=222.27 Aligned_cols=178 Identities=19% Similarity=0.207 Sum_probs=162.0
Q ss_pred CCCchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHH
Q psy2859 4 PMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAAL 83 (534)
Q Consensus 4 ~~~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~ 83 (534)
+.+.++|+.||..|+.+.+..+|...+.++|..|..|+||||+|+..|+.++|++|+++|++++. .+..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL-QNSISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHH
Confidence 45678999999999999999999998889999999999999999999999999999999999999 89999999999999
Q ss_pred cCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcC-CceeeccCCCCCCCCCCCCCCchHHHHHHhc
Q psy2859 84 SGKDDVCACLL-SAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSE-VDYYIVPRGLETTPKLDPILAEPLHTFIMQV 161 (534)
Q Consensus 84 ~g~~~iv~~Ll-~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 161 (534)
.|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|++.| ++++ ..+..|.||||+|+..+
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID----------FQNDFGYTALIEAVGLR 151 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT----------CCCTTSCCHHHHHHHSS
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC----------CCCCCCCCHHHHHHHhc
Confidence 99999999999 567899999999999999999999999999999998 7764 34778999999999999
Q ss_pred C-----chHHHHHHhh------------CCcccccccchHHHHHHHHH
Q psy2859 162 N-----IHPVRVALNL------------LPSLISHLPSVRKVVSLLSE 192 (534)
Q Consensus 162 ~-----~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~ 192 (534)
+ .+++++|++. +|++++...+..++++.|.+
T Consensus 152 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 199 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred cchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHh
Confidence 8 8999999986 56777777777778877753
No 7
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=9.5e-28 Score=212.74 Aligned_cols=154 Identities=23% Similarity=0.278 Sum_probs=145.3
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
.+++++.||..|+.+.++.+|...+.+++..|..|+||||+ +..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV-QDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcC
Confidence 46889999999999999999998778999999999999999 999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. ++++ ..+..|.||||+|+..|+.++
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~----------~~~~~g~t~l~~A~~~~~~~~ 148 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH----------RRDARGLTPLELALQRGAQDL 148 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT----------CCCTTSCCHHHHHHHSCCHHH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC----------CcCCCCCCHHHHHHHcCcHHH
Confidence 99999999999999999999999999999999999999999998 7763 347789999999999999999
Q ss_pred HHHHHhh
Q psy2859 166 VRVALNL 172 (534)
Q Consensus 166 v~~Ll~~ 172 (534)
+++|+++
T Consensus 149 v~~Ll~~ 155 (156)
T 1bd8_A 149 VDILQGH 155 (156)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9999874
No 8
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=5e-27 Score=226.84 Aligned_cols=176 Identities=20% Similarity=0.144 Sum_probs=159.2
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.||..|+.+.++.||.. |+++|..|..|.||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSG 80 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcC
Confidence 45778888888888887777665 999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.++
T Consensus 81 ~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~ 149 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDH----------KISHLGTPLYLACENQQRAC 149 (261)
T ss_dssp CHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------CBTTTBCHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc----------CCCCCCCHHHHHHHhCCHHH
Confidence 999999999999999854 5699999999999999999999999998743 46789999999999999999
Q ss_pred HHHHHhh-----------CCcccccccchHHHHHHHHHhh
Q psy2859 166 VRVALNL-----------LPSLISHLPSVRKVVSLLSEKQ 194 (534)
Q Consensus 166 v~~Ll~~-----------~p~~~~~~~~~~~~~~~l~~~~ 194 (534)
+++|++. +|++.+...+...+++.|.+.+
T Consensus 150 v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g 189 (261)
T 2xai_A 150 VKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFG 189 (261)
T ss_dssp HHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcC
Confidence 9999976 6788888889999999997654
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=235.78 Aligned_cols=165 Identities=20% Similarity=0.228 Sum_probs=135.1
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK 86 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~ 86 (534)
.++++.|+..++...+..+|.+.|+++|..|..|+||||+|+..|+.++|++|++.|++++. .+..|.||||+|+..++
T Consensus 53 ~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~ 131 (269)
T 4b93_B 53 CHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGH 131 (269)
T ss_dssp ----------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTC
T ss_pred CCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccCh
Confidence 35677888888888888888888999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHH
Q psy2859 87 DDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPV 166 (534)
Q Consensus 87 ~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 166 (534)
.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.++|
T Consensus 132 ~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~----------~~~~g~t~Lh~A~~~g~~~~v 201 (269)
T 4b93_B 132 FQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINA----------SNNKGNTALHEAVIEKHVFVV 201 (269)
T ss_dssp HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTC----------BCTTSCBHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCc----------cccCCCcHHHHHHHcCCHHHH
Confidence 9999999999999999999999999999999999999999999999854 477899999999999999999
Q ss_pred HHHHhh------------CCcccccccc
Q psy2859 167 RVALNL------------LPSLISHLPS 182 (534)
Q Consensus 167 ~~Ll~~------------~p~~~~~~~~ 182 (534)
++|+++ +|++++...+
T Consensus 202 ~~Ll~~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 202 ELLLLHGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHHHHTTCCSCCCCTTSCCSGGGSCTTC
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHhCC
Confidence 999987 6777776544
No 10
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=9.4e-28 Score=214.09 Aligned_cols=156 Identities=21% Similarity=0.211 Sum_probs=144.5
Q ss_pred CCchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHc
Q psy2859 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALS 84 (534)
Q Consensus 5 ~~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~ 84 (534)
..+++|+.|+..|+.+.++.||. .|+++|..|..|+||||+|+. |+.+++++|+++|++++. .+..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQ-NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL-KDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTT-SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHh-CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHc
Confidence 35688999999999998888875 599999999999999999999 999999999999999999 899999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCch
Q psy2859 85 GKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIH 164 (534)
Q Consensus 85 g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 164 (534)
|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|++.. ...+..|.||||+|+..|+.+
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNV---------GHRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT---------TCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCC---------CCcCCCCCcHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999998731 334778999999999999999
Q ss_pred HHHHHHhh
Q psy2859 165 PVRVALNL 172 (534)
Q Consensus 165 ~v~~Ll~~ 172 (534)
++++|+++
T Consensus 152 ~~~~Ll~~ 159 (162)
T 1ihb_A 152 VVSLMQAN 159 (162)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999976
No 11
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=2.3e-27 Score=209.67 Aligned_cols=150 Identities=21% Similarity=0.236 Sum_probs=140.7
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK 86 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~ 86 (534)
+++|+.|+..|+.+.++.|+.. |++++ .|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCh
Confidence 5789999999999999888877 88887 488999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHH
Q psy2859 87 DDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPV 166 (534)
Q Consensus 87 ~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 166 (534)
.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|++++. .+..|.||||+|+..|+.+++
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT----------QSKFCKTAFDISIDNGNEDLA 149 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc----------cCCCCCCHHHHHHHcCCHHHH
Confidence 9999999999999999999999999999999999999999999999743 477899999999999999999
Q ss_pred HHH
Q psy2859 167 RVA 169 (534)
Q Consensus 167 ~~L 169 (534)
++|
T Consensus 150 ~~L 152 (153)
T 1awc_B 150 EIL 152 (153)
T ss_dssp HHH
T ss_pred HHh
Confidence 886
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=2.4e-27 Score=223.02 Aligned_cols=178 Identities=22% Similarity=0.258 Sum_probs=158.7
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCchHHHHHHHcC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGA-DVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga-~vn~~~~~~G~TpLh~A~~~g 85 (534)
.++|+.|+..|+.+.++.|| +.|++++..|..|+||||+|+..|+.+++++|+++|+ +++. .+..|.||||+|+..|
T Consensus 26 ~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~ 103 (223)
T 2f8y_A 26 ETALHLAARYSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-RMHDGTTPLILAARLA 103 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTC-CCTTCCCHHHHHHHHT
T ss_pred CchHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCCcHHHHHHHhC
Confidence 45566666777766666555 5599999999999999999999999999999999987 8888 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++. .+..|.||||+|+..|+.++
T Consensus 104 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~ 173 (223)
T 2f8y_A 104 VEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM----------QNNREETPLFLAAREGSYET 173 (223)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTCCCHHHHHHHHTCHHH
T ss_pred cHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC----------cCCCCcCHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999743 46789999999999999999
Q ss_pred HHHHHhh------------CCcccccccchHHHHHHHHHhhhh
Q psy2859 166 VRVALNL------------LPSLISHLPSVRKVVSLLSEKQMK 196 (534)
Q Consensus 166 v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~~~~ 196 (534)
+++|+++ +|++++...+..+++++|.+.+..
T Consensus 174 v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 174 AKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 9999986 577778888888999999775543
No 13
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.9e-27 Score=218.61 Aligned_cols=155 Identities=17% Similarity=0.142 Sum_probs=143.5
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.|+..|+.+.+..|+.. |++++..|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGKTPLMWSIIFG 112 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcC
Confidence 44677778888888777777765 999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|++++. .+..|.|||++|+..|+.++
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 113 YSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA----------RDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC----------BCTTSCBHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----------cCCCCCCHHHHHHHhCcHHH
Confidence 99999999999999999999999999999999999999999999999743 47789999999999999999
Q ss_pred HHHHHhh
Q psy2859 166 VRVALNL 172 (534)
Q Consensus 166 v~~Ll~~ 172 (534)
+++|+++
T Consensus 183 v~~Ll~~ 189 (192)
T 2rfm_A 183 IKIFTEV 189 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999875
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=3.2e-27 Score=223.47 Aligned_cols=181 Identities=23% Similarity=0.251 Sum_probs=153.2
Q ss_pred CCCCchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHH
Q psy2859 3 IPMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAA 82 (534)
Q Consensus 3 ~~~~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~ 82 (534)
-....++++.||..|+.+.++.+|...+..++..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~ 81 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLHIAA 81 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCC-cCCCCCCHHHHHH
Confidence 345677888888899999888888887767788888899999999999999999999999988888 7888899999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcC
Q psy2859 83 LSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVN 162 (534)
Q Consensus 83 ~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 162 (534)
..|+.+++++|+++|++++.++..|.||||+|+..+..+++++|++.|++++. .+..|.||||+|+..|+
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~ 151 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA----------KDHYDATAMHRAAAKGN 151 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHHTC
T ss_pred HcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----------cCCCCCcHHHHHHHcCC
Confidence 99999999999999988888888899999999988888899999888888643 36678888888888888
Q ss_pred chHHHHHHhh------------CCcccccccchHHHHHHHHHhh
Q psy2859 163 IHPVRVALNL------------LPSLISHLPSVRKVVSLLSEKQ 194 (534)
Q Consensus 163 ~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~~ 194 (534)
.+++++|+++ +|++.+...+..++++.|.+.+
T Consensus 152 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 195 (231)
T 3aji_A 152 LKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQG 195 (231)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCC
Confidence 8888888865 6788888888888888887653
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=3.2e-27 Score=223.45 Aligned_cols=176 Identities=23% Similarity=0.238 Sum_probs=155.0
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.|+..|+.+.++.|+ +.|++++..|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 117 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLL-QLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA-VNQNGCTPLHYAASKN 117 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHH-HhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcC
Confidence 346666777777777666555 55999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++. .+..|.||||+|+..++.++
T Consensus 118 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~ 187 (231)
T 3aji_A 118 RHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI----------QDTEGNTPLHLACDEERVEE 187 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC----------CCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc----------cCCCCCCHHHHHHHCCCHHH
Confidence 99999999999999999999999999999999999999999999999754 46789999999999999999
Q ss_pred HHHHHhh------------CCcccccccchHHHHHHHHHh
Q psy2859 166 VRVALNL------------LPSLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 166 v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~ 193 (534)
+++|++. +|++++...+...++++|.+.
T Consensus 188 v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~ 227 (231)
T 3aji_A 188 AKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGE 227 (231)
T ss_dssp HHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccc
Confidence 9999988 456666666666666666543
No 16
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=9.9e-28 Score=214.80 Aligned_cols=157 Identities=21% Similarity=0.193 Sum_probs=147.0
Q ss_pred CCCchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHH
Q psy2859 4 PMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAAL 83 (534)
Q Consensus 4 ~~~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~ 83 (534)
+.+.++++.|+..|+.+.++.+|...+.+++..+..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+.
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA-KDKGGLVPLHNACS 84 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHH
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc-cCCCCCCHHHHHHH
Confidence 44568899999999999999999988899999999999999999999999999999999999999 89999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCc
Q psy2859 84 SGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNI 163 (534)
Q Consensus 84 ~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 163 (534)
.|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|++.|++++ ..+..|.||||+|.. ++.
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~----------~~~~~g~t~l~~a~~-~~~ 153 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT----------KKNRDGNTPLDLVKD-GDT 153 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTSCCTGGGSCT-TCH
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc----------ccCCCCCChhHhHhc-CCh
Confidence 999999999999999999999999999999999999999999999999974 347789999999877 999
Q ss_pred hHHHHHHhh
Q psy2859 164 HPVRVALNL 172 (534)
Q Consensus 164 ~~v~~Ll~~ 172 (534)
+++++|++.
T Consensus 154 ~i~~~L~~~ 162 (165)
T 3twr_A 154 DIQDLLRGD 162 (165)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhhc
Confidence 999999875
No 17
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=1.3e-27 Score=233.04 Aligned_cols=180 Identities=21% Similarity=0.172 Sum_probs=156.6
Q ss_pred CCCc-hhHHHHHHhCCHHHHHHHHHhCCCC---CccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHH
Q psy2859 4 PMEG-NEIFDFISKNDIDNVQKLLSEHKLR---VDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALH 79 (534)
Q Consensus 4 ~~~~-~~l~~aa~~g~~~~v~~lL~~~g~~---~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh 79 (534)
+.+| ++||.||..|+.+.|..||.. |++ +|.+|..|+||||+|+..|+.++|++|+++|++++. .+..|.||||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~ 83 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGF-SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV-AERGGHTALH 83 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHH-HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTSCCHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHH
Confidence 4455 566666666776666655554 777 888999999999999999999999999999999999 8999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCC-----------------------------------------------CCCCCCCCCCHHH
Q psy2859 80 FAALSGKDDVCACLLSAGAK-----------------------------------------------SYATNSVGRTASQ 112 (534)
Q Consensus 80 ~A~~~g~~~iv~~Ll~~ga~-----------------------------------------------~~~~~~~G~TpL~ 112 (534)
+|+..|+.+++++|+++|++ ++..+..|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 99999999999999998865 6778889999999
Q ss_pred HHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh------------CCcccccc
Q psy2859 113 MAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL------------LPSLISHL 180 (534)
Q Consensus 113 ~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~ 180 (534)
+|+..|+.+++++|++.|++++.. .+..|.||||+|+..|+.++|++|++. +|++++..
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~~~~~---------~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGADLNKP---------EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCC---------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCC---------CCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHH
Confidence 999999999999999999998543 123499999999999999999999976 78889999
Q ss_pred cchHHHHHHHHHhh
Q psy2859 181 PSVRKVVSLLSEKQ 194 (534)
Q Consensus 181 ~~~~~~~~~l~~~~ 194 (534)
.+...++++|.+.+
T Consensus 235 ~~~~~~v~~Ll~~g 248 (282)
T 1oy3_D 235 RPNPILARLLRAHG 248 (282)
T ss_dssp SSCHHHHHHHHHTT
T ss_pred cCCcHHHHHHHHcC
Confidence 99999999996544
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=1.9e-27 Score=228.63 Aligned_cols=177 Identities=21% Similarity=0.246 Sum_probs=154.8
Q ss_pred CCCc-hhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCchHHHHH
Q psy2859 4 PMEG-NEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGA-DVNSGRHEHGYSALHFA 81 (534)
Q Consensus 4 ~~~~-~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga-~vn~~~~~~G~TpLh~A 81 (534)
+..| ++|+.|+..|+.+.|+.| .+.|++++..|..|+||||+|+..|+.+++++|+++|+ +++. .+..|.||||+|
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A 131 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRL-LEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-RMHDGTTPLILA 131 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHH-HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC-CCTTCCCHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHH-HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-cCCCCCcHHHHH
Confidence 3444 556666666666655554 45699999999999999999999999999999999987 8888 899999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhc
Q psy2859 82 ALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQV 161 (534)
Q Consensus 82 ~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 161 (534)
+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.|++++. .+..|.||||+|+..|
T Consensus 132 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~tpL~~A~~~~ 201 (253)
T 1yyh_A 132 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM----------QNNREETPLFLAAREG 201 (253)
T ss_dssp HHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHHT
T ss_pred HHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----------cCCCCCCHHHHHHHCC
Confidence 999999999999999999999999999999999999999999999999999743 4778999999999999
Q ss_pred CchHHHHHHhh------------CCcccccccchHHHHHHHHH
Q psy2859 162 NIHPVRVALNL------------LPSLISHLPSVRKVVSLLSE 192 (534)
Q Consensus 162 ~~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~ 192 (534)
+.+++++|+++ +|++++...+..+++++|..
T Consensus 202 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 202 SYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred CHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999987 56777888888888888854
No 19
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.8e-27 Score=216.20 Aligned_cols=157 Identities=20% Similarity=0.234 Sum_probs=147.9
Q ss_pred CCchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHc
Q psy2859 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALS 84 (534)
Q Consensus 5 ~~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~ 84 (534)
...++++.|+..|+.+.|+.+|...+.++|..|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV-MNRGDDTPLHLAASH 82 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHc
Confidence 3457899999999999999999998999999999999999999999999999999999999999 899999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCch
Q psy2859 85 GKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIH 164 (534)
Q Consensus 85 g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 164 (534)
|+.++|++|+++|++++.+|..|.||||+|+..++.+++++|++.|++++. .+..|.|||++|+..++.+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~tpl~~A~~~~~~~ 152 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI----------CNKYGEMPVDKAKAPLREL 152 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB----------CCTTSCCGGGGSCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch----------hccCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999854 4778999999999999999
Q ss_pred HHHHHHhh
Q psy2859 165 PVRVALNL 172 (534)
Q Consensus 165 ~v~~Ll~~ 172 (534)
++++|+++
T Consensus 153 ~~~~L~~~ 160 (179)
T 3f6q_A 153 LRERAEKM 160 (179)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999987
No 20
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=1.7e-26 Score=227.43 Aligned_cols=187 Identities=21% Similarity=0.272 Sum_probs=150.6
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
++++++.|+..|+.+.|..||.. |+++|..|..|.||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ-PDNEGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH-CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHT
T ss_pred CccHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcC
Confidence 35677888888998888888776 999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhh-cCCceeecc----------------CCCCCCCCCCC
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAK-SEVDYYIVP----------------RGLETTPKLDP 148 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~-~~~~~~~~~----------------~~~~~~~~~~~ 148 (534)
+.++|++|+++|++++..+..|.||||+|+..+..++++.++. .+++++... .+.......+.
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (299)
T 1s70_B 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK 197 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcC
Confidence 9999999999999999999888888888888877777765543 344432210 01111123355
Q ss_pred CCCchHHHHHHhcCchHHHHHHhh------------CCcccccccchHHHHHHHHHhh
Q psy2859 149 ILAEPLHTFIMQVNIHPVRVALNL------------LPSLISHLPSVRKVVSLLSEKQ 194 (534)
Q Consensus 149 ~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~~ 194 (534)
.|.||||+|+..|+.++|++|++. +|++.+...+...+++.|.+.+
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 255 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC
Confidence 678888888888888888888864 6777888888888888886644
No 21
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=2e-26 Score=225.63 Aligned_cols=175 Identities=19% Similarity=0.134 Sum_probs=157.4
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK 86 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~ 86 (534)
.++|+.||..|+.+.|..||. .|+++|.+|..|+||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|+
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~~~ 137 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLIS-QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGS 137 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH-TTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCH
Confidence 466777777777777666665 5999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHH
Q psy2859 87 DDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPV 166 (534)
Q Consensus 87 ~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 166 (534)
.++|++|+++|++++..+ .|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++
T Consensus 138 ~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----------~d~~g~t~L~~A~~~~~~~~v 206 (285)
T 3d9h_A 138 WDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDH----------KISHLGTPLYLACENQQRACV 206 (285)
T ss_dssp HHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTC----------CBTTTBCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----------cCCCCCCHHHHHHHcCcHHHH
Confidence 999999999999998654 599999999999999999999999998743 467899999999999999999
Q ss_pred HHHHhh-----------CCcccccccchHHHHHHHHHhh
Q psy2859 167 RVALNL-----------LPSLISHLPSVRKVVSLLSEKQ 194 (534)
Q Consensus 167 ~~Ll~~-----------~p~~~~~~~~~~~~~~~l~~~~ 194 (534)
++|++. +|++.+...+..++++.|.+.+
T Consensus 207 ~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 245 (285)
T 3d9h_A 207 KKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFG 245 (285)
T ss_dssp HHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 999976 6788888889999999997654
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=2.2e-26 Score=218.93 Aligned_cols=178 Identities=20% Similarity=0.198 Sum_probs=161.5
Q ss_pred CchhHHHHHHhCCHHHHHHHHH---hCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHH
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLS---EHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAA 82 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~---~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~ 82 (534)
+.++||.|+..|+.+.+..|+. +.|.++|..|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~ 87 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMA-LDRHGQTAAHLAC 87 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHH
Confidence 4577778888888888888776 57999999999999999999999999999999999999999 8999999999999
Q ss_pred HcCCHHHHHHHHhcCC----CCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCC-CCCCchHHHH
Q psy2859 83 LSGKDDVCACLLSAGA----KSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLD-PILAEPLHTF 157 (534)
Q Consensus 83 ~~g~~~iv~~Ll~~ga----~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A 157 (534)
..|+.+++++|++.|+ +++..+..|.||||+|+..+..+++++|++.|++++.. + ..|.||||+|
T Consensus 88 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----------~~~~g~t~L~~A 157 (241)
T 1k1a_A 88 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAV----------DIKSGRSPLIHA 157 (241)
T ss_dssp HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC----------CTTTCCCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc----------cccCCCcHHHHH
Confidence 9999999999999987 88999999999999999999999999999999997533 4 5799999999
Q ss_pred HHhcCchHHHHHHhh------------CCcccccccchHHHHHHHHHhh
Q psy2859 158 IMQVNIHPVRVALNL------------LPSLISHLPSVRKVVSLLSEKQ 194 (534)
Q Consensus 158 ~~~~~~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~~ 194 (534)
+..|+.+++++|++. +|++.+...+..++++.|.+.+
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 206 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG 206 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 999999999999986 5788888888899999997643
No 23
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=1.2e-26 Score=233.27 Aligned_cols=130 Identities=27% Similarity=0.292 Sum_probs=121.3
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.||..|+.+.|..+|...++++|..|..|.||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA-KDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTT
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCcHHHHHHHCC
Confidence 357899999999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeec
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIV 136 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~ 136 (534)
+.++|++|+++|++++..|..|.||||+|+..++.+++++|++.|++++..
T Consensus 103 ~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 153 (351)
T 3utm_A 103 HYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLV 153 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 999999999999999999999999999999999999999999999887654
No 24
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=3.7e-26 Score=217.00 Aligned_cols=176 Identities=21% Similarity=0.209 Sum_probs=159.3
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.||..|+.+.+..|+. .|++++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQ-AGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP-KDAEGSTCLHLAAKKG 88 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCC-CCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHH-cCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcC
Confidence 4577777888888776665554 5999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCch
Q psy2859 86 KDDVCACLLSAG-AKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIH 164 (534)
Q Consensus 86 ~~~iv~~Ll~~g-a~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 164 (534)
+.+++++|++.| ++++..+..|.||||+|+..++.+++++|++.|++++. .+..|.||||+|+..|+.+
T Consensus 89 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~ 158 (237)
T 3b7b_A 89 HYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI----------RDNEENICLHWAAFSGCVD 158 (237)
T ss_dssp CHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHHCCHH
T ss_pred CHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc----------cCCCCCCHHHHHHHCCCHH
Confidence 999999999998 89999999999999999999999999999999998743 4678999999999999999
Q ss_pred HHHHHHhh------------CCcccccccchHHHHHHHHHh
Q psy2859 165 PVRVALNL------------LPSLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 165 ~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~ 193 (534)
++++|++. +|++.+...+..++++.|.+.
T Consensus 159 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 199 (237)
T 3b7b_A 159 IAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSR 199 (237)
T ss_dssp HHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHc
Confidence 99999976 678888888889999999654
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=2.5e-26 Score=218.56 Aligned_cols=175 Identities=19% Similarity=0.148 Sum_probs=153.2
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC----CCCCCCCCCCchHHHHHH
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGA----DVNSGRHEHGYSALHFAA 82 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga----~vn~~~~~~G~TpLh~A~ 82 (534)
.++|+.|+..|+.+.+. +|.+.|++++..|..|.||||+|+..|+.+++++|++.|+ +++. .+..|.||||+|+
T Consensus 47 ~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~~g~t~L~~A~ 124 (241)
T 1k1a_A 47 QTPLHLAVITTLPSVVR-LLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA-RNYDGLTALHVAV 124 (241)
T ss_dssp CCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTC-CCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHH-HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccc-cCcCCCcHHHHHH
Confidence 35566666666665554 5555699999999999999999999999999999999988 8888 8999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhc
Q psy2859 83 LSGKDDVCACLLSAGAKSYATN-SVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQV 161 (534)
Q Consensus 83 ~~g~~~iv~~Ll~~ga~~~~~~-~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 161 (534)
..|+.+++++|++.|++++..+ ..|.||||+|+..++.+++++|++.|++++. .+..|.||||+|+..|
T Consensus 125 ~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 125 NTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA----------QMYSGSSALHSASGRG 194 (241)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------BCTTSCBHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC----------cCCCCCCHHHHHHHcC
Confidence 9999999999999999999998 7899999999999999999999999999743 4778999999999999
Q ss_pred CchHHHHHHhh------------CCcccccccchHHHHHHHHHh
Q psy2859 162 NIHPVRVALNL------------LPSLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 162 ~~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~ 193 (534)
+.+++++|+++ +|++++...+..++++.|.++
T Consensus 195 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 195 LLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC----
T ss_pred CHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccC
Confidence 99999999976 688888888888888887543
No 26
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=1.5e-26 Score=207.98 Aligned_cols=129 Identities=31% Similarity=0.416 Sum_probs=111.4
Q ss_pred CCCch-hHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHH
Q psy2859 4 PMEGN-EIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAA 82 (534)
Q Consensus 4 ~~~~~-~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~ 82 (534)
+..|. +++.|+..++...+ .+|.+.|++++.+|..|+||||+|+..|+.++|++||++|+++|. +|..|+||||+|+
T Consensus 34 d~~g~t~l~~a~~~~~~~~~-~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~-~d~~G~TpLh~A~ 111 (169)
T 4gpm_A 34 DSDGRTPLHHAAENGHKEVV-KLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAA 111 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHH-HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHH-HHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCC-CCCCCCCHHHHHH
Confidence 44454 55555555555554 555566999999999999999999999999999999999999999 8999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCcee
Q psy2859 83 LSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYY 134 (534)
Q Consensus 83 ~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~ 134 (534)
..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 112 ~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 112 ENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 9999999999999999999999999999999999999999999999999985
No 27
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=8.3e-27 Score=224.18 Aligned_cols=165 Identities=21% Similarity=0.173 Sum_probs=138.2
Q ss_pred HHHHHHHHHhCCCCCcc-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcC
Q psy2859 19 IDNVQKLLSEHKLRVDL-YDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAG 97 (534)
Q Consensus 19 ~~~v~~lL~~~g~~~n~-~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~g 97 (534)
...+.++|.+.|++++. .|..|+||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|+.+++++|++.|
T Consensus 35 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 113 (253)
T 1yyh_A 35 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRNR 113 (253)
T ss_dssp -----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHST
T ss_pred ChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 44555555566999865 589999999999999999999999999999999 8999999999999999999999999998
Q ss_pred C-CCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh----
Q psy2859 98 A-KSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL---- 172 (534)
Q Consensus 98 a-~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---- 172 (534)
+ +++..+..|.||||+|+..+..+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.
T Consensus 114 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 183 (253)
T 1yyh_A 114 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA----------VDDLGKSALHWAAAVNNVDAAVVLLKNGANK 183 (253)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTC----------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 7 8999999999999999999999999999999999754 467899999999999999999999976
Q ss_pred --------CCcccccccchHHHHHHHHHhh
Q psy2859 173 --------LPSLISHLPSVRKVVSLLSEKQ 194 (534)
Q Consensus 173 --------~p~~~~~~~~~~~~~~~l~~~~ 194 (534)
+|++.+...+..++++.|.+.+
T Consensus 184 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 213 (253)
T 1yyh_A 184 DMQNNREETPLFLAAREGSYETAKVLLDHF 213 (253)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 6788888889999999997643
No 28
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=6.3e-27 Score=229.23 Aligned_cols=172 Identities=19% Similarity=0.199 Sum_probs=151.4
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK 86 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~ 86 (534)
.++|+.|+..|+.+.|..||. .|+++|..| |+||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|+
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~ 107 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLN-AGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQ-FDDKGNTALYYAVDSGN 107 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH-TTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHh-CCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCcHHHHHHHcCC
Confidence 456666666676666655555 599999874 99999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCC-CCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 87 DDVCACLLSAGAKSYATNSVG-RTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 87 ~~iv~~Ll~~ga~~~~~~~~G-~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
.++|++|+++|++++..+..| .||||+|+..|+.+++++|+..|++.. ....|.||||+|+..|+.++
T Consensus 108 ~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----------~~~~g~t~L~~A~~~g~~~~ 176 (285)
T 3kea_A 108 MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF-----------DLAILLSCIHITIKNGHVDM 176 (285)
T ss_dssp HHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC-----------CCSTHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc-----------cccCCccHHHHHHHcChHHH
Confidence 999999999999999999999 799999999999999999999987752 11279999999999999999
Q ss_pred HHHHHhh------------CC-cccccccchHHHHHHHHHh
Q psy2859 166 VRVALNL------------LP-SLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 166 v~~Ll~~------------~p-~~~~~~~~~~~~~~~l~~~ 193 (534)
+++|+++ +| ++++...+..++++.|.+.
T Consensus 177 v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ 217 (285)
T 3kea_A 177 MILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217 (285)
T ss_dssp HHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS
T ss_pred HHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHc
Confidence 9999976 54 8889999999999999654
No 29
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=6.4e-27 Score=225.24 Aligned_cols=180 Identities=17% Similarity=0.170 Sum_probs=156.2
Q ss_pred CchhHHHHHHhCCHHHH---HHHHHhCCCCCcc----CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCC------
Q psy2859 6 EGNEIFDFISKNDIDNV---QKLLSEHKLRVDL----YDEHGMTPLQHAAYK---GNKQICQLLLDHGADVNSG------ 69 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v---~~lL~~~g~~~n~----~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~ga~vn~~------ 69 (534)
+.++||.||..|+.+.| .++|.+.|+++|. .|..|+||||+|+.. |+.++|++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 45789999999999854 4455567999998 899999999999999 9999999999999988741
Q ss_pred ----CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-------------CCCHHHHHHHhcHHHHHHHHhh---c
Q psy2859 70 ----RHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSV-------------GRTASQMAAFVVVAVINNYIAK---S 129 (534)
Q Consensus 70 ----~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~-------------G~TpL~~A~~~~~~~i~~~L~~---~ 129 (534)
.|..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|++ .
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 2367999999999999999999999999999999886 9999999999999999999999 8
Q ss_pred CCceeeccCCCCCCCCCCCCCCchHHHHHH--hcCch-------HHHHHHhh-------------------CCccccccc
Q psy2859 130 EVDYYIVPRGLETTPKLDPILAEPLHTFIM--QVNIH-------PVRVALNL-------------------LPSLISHLP 181 (534)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~--~~~~~-------~v~~Ll~~-------------------~p~~~~~~~ 181 (534)
|++++. .|..|.||||+|+. .++.+ ++++|++. +|++++...
T Consensus 162 ga~~n~----------~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 231 (256)
T 2etb_A 162 PASLEA----------TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKE 231 (256)
T ss_dssp CCCTTC----------CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred CCCcCc----------cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHh
Confidence 999854 47789999999999 77887 99999864 567777777
Q ss_pred chHHHHHHHHHhhh
Q psy2859 182 SVRKVVSLLSEKQM 195 (534)
Q Consensus 182 ~~~~~~~~l~~~~~ 195 (534)
+..++++.|.+++.
T Consensus 232 g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 232 GKIEIFRHILQREF 245 (256)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhCCC
Confidence 77888888876543
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=4e-26 Score=215.30 Aligned_cols=176 Identities=17% Similarity=0.199 Sum_probs=153.5
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCchHHHHHHH
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGAD--VNSGRHEHGYSALHFAAL 83 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~--vn~~~~~~G~TpLh~A~~ 83 (534)
+.++|+.|+..|+.+.+..+|.......+..|..|.||||+|+..|+.+++++|+++|++ ++...+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 567899999999999999888884444455899999999999999999999999999954 444357899999999999
Q ss_pred cCCHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhc
Q psy2859 84 SGKDDVCACLLSAG--AKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQV 161 (534)
Q Consensus 84 ~g~~~iv~~Ll~~g--a~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 161 (534)
.|+.+++++|+++| ++++..+..|.||||+|+..+..+++++|++.|++++. .+..|.||||+|+..|
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~ 151 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI----------KDKFNQIPLHRAASVG 151 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC----------CCTTSCCHHHHHHHTT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccc----------cCCCCCCHHHHHHHcC
Confidence 99999999999998 88999999999999999999999999999999998743 4677999999999999
Q ss_pred CchHHHHHHhh-------------CCcccccccchHHHHHHHH
Q psy2859 162 NIHPVRVALNL-------------LPSLISHLPSVRKVVSLLS 191 (534)
Q Consensus 162 ~~~~v~~Ll~~-------------~p~~~~~~~~~~~~~~~l~ 191 (534)
+.+++++|++. +|++.+...+...+++.|.
T Consensus 152 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 152 SLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp CHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999976 5778888888888999997
No 31
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=2.9e-27 Score=224.79 Aligned_cols=181 Identities=19% Similarity=0.181 Sum_probs=155.7
Q ss_pred CCCc-hhHHHHHHhCCHHHHHHHHHh---CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHH
Q psy2859 4 PMEG-NEIFDFISKNDIDNVQKLLSE---HKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALH 79 (534)
Q Consensus 4 ~~~~-~~l~~aa~~g~~~~v~~lL~~---~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh 79 (534)
+.+| ++||.|+..|+.+.+..||.. .++++|..|..|+||||+|+..|+.++|++|+++|++++. .+..|.||||
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~ 83 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRGNTPLH 83 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTCCCHHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHH
Confidence 4444 667777777777776666644 2457999999999999999999999999999999999999 8999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCC------CCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCC-CCCc
Q psy2859 80 FAALSGKDDVCACLLSAGAK------SYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDP-ILAE 152 (534)
Q Consensus 80 ~A~~~g~~~iv~~Ll~~ga~------~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~-~g~t 152 (534)
+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|++.|++++.. +. .|.|
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------~~~~g~t 153 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ----------EPCNGRT 153 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCC----------CTTTCCC
T ss_pred HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC----------CCCCCCC
Confidence 99999999999999999876 4677889999999999999999999999999998543 44 7999
Q ss_pred hHHHHHHhcCchHHHHHHhh------------CCcccccccchHHHHHHHHHhhh
Q psy2859 153 PLHTFIMQVNIHPVRVALNL------------LPSLISHLPSVRKVVSLLSEKQM 195 (534)
Q Consensus 153 ~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~~~ 195 (534)
|||+|+..|+.++|++|+++ +|++++...+...+++.|.+.+.
T Consensus 154 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 154 ALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 99999999999999999976 78899999999999999976543
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=9.3e-26 Score=212.80 Aligned_cols=157 Identities=18% Similarity=0.169 Sum_probs=137.0
Q ss_pred CCCc-hhHHHHHHhCCHHHHHHHHHhCC--CCCcc-CCCCCCcHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCchH
Q psy2859 4 PMEG-NEIFDFISKNDIDNVQKLLSEHK--LRVDL-YDEHGMTPLQHAAYKGNKQICQLLLDHG--ADVNSGRHEHGYSA 77 (534)
Q Consensus 4 ~~~~-~~l~~aa~~g~~~~v~~lL~~~g--~~~n~-~d~~g~TpLh~Aa~~g~~~iv~~Ll~~g--a~vn~~~~~~G~Tp 77 (534)
+..| ++|+.|+..|+.+.+. +|.+.| .+++. .+..|+||||+|+..|+.+++++|+++| ++++. .+..|.||
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~-~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~g~t~ 110 (228)
T 2dzn_A 33 DQDGRIPLHWSVSFQAHEITS-FLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNK-ITNQGVTC 110 (228)
T ss_dssp CTTSCCHHHHHHHTTCHHHHH-HHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTC-CCTTCCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHH-HHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccc-CCcCCCCH
Confidence 4444 5555555666555554 555558 66666 7899999999999999999999999999 88888 89999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcC-CceeeccCCCCCCCCCCCCCCchHHH
Q psy2859 78 LHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSE-VDYYIVPRGLETTPKLDPILAEPLHT 156 (534)
Q Consensus 78 Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~ 156 (534)
||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++.| ++++. .|..|.||||+
T Consensus 111 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------~d~~g~t~L~~ 180 (228)
T 2dzn_A 111 LHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW----------QDKQGWTPLFH 180 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC----------CCTTSCCHHHH
T ss_pred HHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC----------cCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999 87743 47789999999
Q ss_pred HHHhcCchHHHHHH-hh
Q psy2859 157 FIMQVNIHPVRVAL-NL 172 (534)
Q Consensus 157 A~~~~~~~~v~~Ll-~~ 172 (534)
|+..|+.+++++|+ +.
T Consensus 181 A~~~~~~~~v~~Ll~~~ 197 (228)
T 2dzn_A 181 ALAEGHGDAAVLLVEKY 197 (228)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHhc
Confidence 99999999999999 54
No 33
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=6.1e-26 Score=219.20 Aligned_cols=153 Identities=21% Similarity=0.178 Sum_probs=139.0
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.|+..|+.+.+..|| +.|+++|..|..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|
T Consensus 36 g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~~ 112 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRG 112 (261)
T ss_dssp CCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcC
Confidence 346677777777776665555 45999999999999999999999999999999999999986 567999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++..|..|.||||+|+..++.+++++|++.|++++ .+..|.||||+|+..++.++
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----------~~~~g~t~Lh~A~~~~~~~~ 181 (261)
T 2xai_A 113 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-----------QGKGQDSPLHAVARTASEEL 181 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT-----------CCBTTBCHHHHHHHHTCHHH
T ss_pred cHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC-----------CCCCCCChHHHHHHcCCHHH
Confidence 9999999999999999999999999999999999999999999999974 25679999999999999999
Q ss_pred HHHHHhh
Q psy2859 166 VRVALNL 172 (534)
Q Consensus 166 v~~Ll~~ 172 (534)
+++|+++
T Consensus 182 v~~Ll~~ 188 (261)
T 2xai_A 182 ACLLMDF 188 (261)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9999987
No 34
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=1.4e-25 Score=213.03 Aligned_cols=172 Identities=23% Similarity=0.256 Sum_probs=150.8
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCchHHHHHHHcC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHG-ADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~g-a~vn~~~~~~G~TpLh~A~~~g 85 (534)
.++++.|+..|+.+.+. +|.+.|++++..+..|.||||+|+..|+.+++++|++.| ++++. .+..|.||||+|+..|
T Consensus 45 ~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~ 122 (237)
T 3b7b_A 45 RTPLMEAAENNHLEAVK-YLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNC-QDDGGWTPMIWATEYK 122 (237)
T ss_dssp CCHHHHHHHTTCHHHHH-HHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHhCCHHHHH-HHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCccc-CCCCCCCHHHHHHHcC
Confidence 45666666666666555 555669999999999999999999999999999999998 89998 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++.++..|.||||+|+..+..+++++|++.|++++. .+..|.||||+|+..++.++
T Consensus 123 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~ 192 (237)
T 3b7b_A 123 HVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA----------VNIHGDSPLHIAARENRYDC 192 (237)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTC----------CCTTCCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC----------cCCCCCCHHHHHHHhCCHhH
Confidence 99999999999999999999999999999999999999999999999743 46789999999999999999
Q ss_pred HHHHHhh------------CCcccccccchHHHHHHH
Q psy2859 166 VRVALNL------------LPSLISHLPSVRKVVSLL 190 (534)
Q Consensus 166 v~~Ll~~------------~p~~~~~~~~~~~~~~~l 190 (534)
+++|+++ +|++++...+....+..|
T Consensus 193 v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l 229 (237)
T 3b7b_A 193 VVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQM 229 (237)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHH
T ss_pred HHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999977 566777776666544444
No 35
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=5e-26 Score=215.43 Aligned_cols=161 Identities=18% Similarity=0.176 Sum_probs=137.9
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCC-----ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC--------
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRV-----DLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHE-------- 72 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~-----n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~-------- 72 (534)
+.++|+.|+..|+.+.+..||.. |+++ +..|..|+||||+|+..|+.+++++|+++|++++. .+.
T Consensus 37 g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~~~~~~~ 114 (232)
T 2rfa_A 37 GETALHIAALYDNLEAAMVLMEA-APELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSA-RATGSVFHYRP 114 (232)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc-CchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCc-ccCCcceeecc
Confidence 34566667777777666666554 8776 66788999999999999999999999999999998 544
Q ss_pred -----CCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHH----HHHhhcCCceeeccCCCCCC
Q psy2859 73 -----HGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVIN----NYIAKSEVDYYIVPRGLETT 143 (534)
Q Consensus 73 -----~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~----~~L~~~~~~~~~~~~~~~~~ 143 (534)
.|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..++.+++ ++|+..|++..... ..
T Consensus 115 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~----~~ 190 (232)
T 2rfa_A 115 HNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKS----LE 190 (232)
T ss_dssp TCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCC----GG
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhh----hh
Confidence 799999999999999999999999999999999999999999999888877 99999999863211 00
Q ss_pred CCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 144 PKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 144 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
...+..|.||||+|+..|+.+++++|+++
T Consensus 191 ~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 191 LVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 23577899999999999999999999988
No 36
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=6.6e-26 Score=209.55 Aligned_cols=154 Identities=20% Similarity=0.165 Sum_probs=138.5
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLL-DHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll-~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
.++|+.|+..|+.+.++.|| +.|++++..|..|.||||+|+..|+.+++++|+ ..+++++. .+..|.||||+|+..|
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~ 117 (201)
T 3hra_A 40 NTPLNIAVHNNDIEIAKALI-DRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNK-HNRYGGNALIPAAEKG 117 (201)
T ss_dssp CCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC-CCTTSCCSHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCccccc-ccCCCCcHHHHHHHcC
Confidence 46677777777766665555 559999999999999999999999999999999 66789998 8999999999999999
Q ss_pred CHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHhcH-----HHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHH
Q psy2859 86 KDDVCACLLSAG-AKSYATNSVGRTASQMAAFVVV-----AVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIM 159 (534)
Q Consensus 86 ~~~iv~~Ll~~g-a~~~~~~~~G~TpL~~A~~~~~-----~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 159 (534)
+.+++++|+++| ++++.+|..|.||||+|+..+. .+++++|++.|++++. .+..|.||||+|+.
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~t~l~~A~~ 187 (201)
T 3hra_A 118 HIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI----------KDNSGRTAMDYANQ 187 (201)
T ss_dssp CHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc----------cCCCCCCHHHHHHH
Confidence 999999999999 9999999999999999998865 8999999999999843 47789999999999
Q ss_pred hcCchHHHHHHhh
Q psy2859 160 QVNIHPVRVALNL 172 (534)
Q Consensus 160 ~~~~~~v~~Ll~~ 172 (534)
.|+.+++++|+++
T Consensus 188 ~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 188 KGYTEISKILAQY 200 (201)
T ss_dssp HTCHHHHHHHHTC
T ss_pred cCCHhHHHHHHhc
Confidence 9999999999875
No 37
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=1.4e-25 Score=219.60 Aligned_cols=171 Identities=20% Similarity=0.182 Sum_probs=147.6
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK 86 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~ 86 (534)
.++|+.|+..|+.+.+. +|.+.|+++|.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+
T Consensus 93 ~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 93 VSPLHEACLGGHLSCVK-ILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRGH 169 (285)
T ss_dssp CCHHHHHHHTTCHHHHH-HHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHHTC
T ss_pred CCHHHHHHHCCcHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCC
Confidence 35566666666665555 55556999999999999999999999999999999999999986 4569999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHH
Q psy2859 87 DDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPV 166 (534)
Q Consensus 87 ~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 166 (534)
.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|++++ .+..|.||||+|+..++.+++
T Consensus 170 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----------~~~~g~t~L~~A~~~~~~~~v 238 (285)
T 3d9h_A 170 VECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-----------QGKGQDSPLHAVVRTASEELA 238 (285)
T ss_dssp HHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-----------CCBTTBCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-----------CCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999999999999999999999999999999999864 266799999999999999999
Q ss_pred HHHHhh------------CCcccccccchHHHHHHHHHh
Q psy2859 167 RVALNL------------LPSLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 167 ~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~ 193 (534)
++|+++ +|++++.. ...+++.|.+.
T Consensus 239 ~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~~~~~Ll~~ 275 (285)
T 3d9h_A 239 CLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFLER 275 (285)
T ss_dssp HHHHHTTCCTTCCCTTSCCGGGGSCT--TSHHHHHHHHH
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHhcC--ccHHHHHHHHh
Confidence 999987 56666652 34566666553
No 38
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=1.5e-26 Score=222.59 Aligned_cols=164 Identities=21% Similarity=0.130 Sum_probs=135.1
Q ss_pred CCCc-hhHHHHHHh---CCHHHHHHHHHhCCCCCccC-----------CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy2859 4 PMEG-NEIFDFISK---NDIDNVQKLLSEHKLRVDLY-----------DEHGMTPLQHAAYKGNKQICQLLLDHGADVNS 68 (534)
Q Consensus 4 ~~~~-~~l~~aa~~---g~~~~v~~lL~~~g~~~n~~-----------d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~ 68 (534)
+..| ++||.|+.. |+.+.|..|| +.|++++.. |..|+||||+|+..|+.++|++|+++|++++.
T Consensus 40 d~~g~t~L~~A~~~~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 40 GSTGKTCLMKAVLNLQDGVNACIMPLL-QIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp TTTTBCHHHHHHHTCBTTBCTTHHHHH-HHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCHHHHHHHccccchHHHHHHHH-hcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 4455 455555555 6666555555 447776633 47899999999999999999999999999998
Q ss_pred CCCCC-------------CchHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCCHHHHHHH--hcHHH-------HH
Q psy2859 69 GRHEH-------------GYSALHFAALSGKDDVCACLLS---AGAKSYATNSVGRTASQMAAF--VVVAV-------IN 123 (534)
Q Consensus 69 ~~~~~-------------G~TpLh~A~~~g~~~iv~~Ll~---~ga~~~~~~~~G~TpL~~A~~--~~~~~-------i~ 123 (534)
.+.. |.||||+|+..|+.++|++|++ +|++++.+|..|+||||+|+. .+..+ ++
T Consensus 119 -~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv 197 (256)
T 2etb_A 119 -RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMY 197 (256)
T ss_dssp -CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred -ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHH
Confidence 6665 9999999999999999999999 999999999999999999998 67777 99
Q ss_pred HHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 124 NYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 124 ~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
++|++.|++++... ......|..|.||||+|+..|+.+++++|+++
T Consensus 198 ~~Ll~~ga~~~~~~---~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 243 (256)
T 2etb_A 198 DGLLQMGARLCPTV---QLEEISNHQGLTPLKLAAKEGKIEIFRHILQR 243 (256)
T ss_dssp HHHHHHHHHHSTTC---CGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHcCCCccccc---ccccccCCCCCCHHHHHHHhCCHHHHHHHHhC
Confidence 99999999983110 00023477899999999999999999999987
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=2.6e-25 Score=209.07 Aligned_cols=156 Identities=23% Similarity=0.181 Sum_probs=142.9
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++++.|+..|+.+.+..|+...+.+++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 58 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 58 GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVN 136 (223)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC-cCCCCCcHHHHHHHcC
Confidence 346677777777777777777664559999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|++++. .+..|.|||++|+..++.++
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~t~l~~A~~~~~~~i 206 (223)
T 2f8y_A 137 NVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI----------TDHMDRLPRDIAQERMHHDI 206 (223)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC----------CCTTCCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc----------ccccCCCHHHHHHHhcchHH
Confidence 99999999999999999999999999999999999999999999998743 47789999999999999999
Q ss_pred HHHHHhh
Q psy2859 166 VRVALNL 172 (534)
Q Consensus 166 v~~Ll~~ 172 (534)
+++|+++
T Consensus 207 ~~~L~~~ 213 (223)
T 2f8y_A 207 VRLLDEY 213 (223)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9999988
No 40
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=6.7e-26 Score=220.78 Aligned_cols=157 Identities=18% Similarity=0.144 Sum_probs=139.9
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--------------------
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGAD-------------------- 65 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~-------------------- 65 (534)
+.++||.|+..|+.+.|+.|| ++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 45 GQTALHLAAILGEASTVEKLY-AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp SCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred CCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 346677777777776665555 55999999999999999999999999999999998865
Q ss_pred ---------------------------CCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-CCCHHHHHHHh
Q psy2859 66 ---------------------------VNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSV-GRTASQMAAFV 117 (534)
Q Consensus 66 ---------------------------vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~-G~TpL~~A~~~ 117 (534)
++. .+..|.||||+|+..|+.++|++|+++|++++..+.. |+||||+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 202 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEA-ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA 202 (282)
T ss_dssp --------------------CCCGGGGTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCC-cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHc
Confidence 666 7889999999999999999999999999999999864 99999999999
Q ss_pred cHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhhCC
Q psy2859 118 VVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNLLP 174 (534)
Q Consensus 118 ~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~p 174 (534)
++.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++..
T Consensus 203 ~~~~~v~~Ll~~gad~~~----------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 249 (282)
T 1oy3_D 203 QAASVLELLLKAGADPTA----------RMYGGRTPLGSALLRPNPILARLLRAHGA 249 (282)
T ss_dssp TCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHTSSCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCcc----------cccCCCCHHHHHHHcCCcHHHHHHHHcCC
Confidence 999999999999999854 47789999999999999999999999833
No 41
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=2e-26 Score=210.51 Aligned_cols=152 Identities=14% Similarity=0.116 Sum_probs=136.9
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCC-CCCCcHHHHHHHcCCH----HHHHHHHHCCCCCCCCCCCCCchHHHHH
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYD-EHGMTPLQHAAYKGNK----QICQLLLDHGADVNSGRHEHGYSALHFA 81 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d-~~g~TpLh~Aa~~g~~----~iv~~Ll~~ga~vn~~~~~~G~TpLh~A 81 (534)
.++++.||..|+.+.+..++.. + ++..+ ..|+||||+|+..|+. +++++||++|+|+|. .+..|+||||+|
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~-~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpLh~a 82 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEK-G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS-RTKEGTTLFFPL 82 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHH-S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-CCTTCCCTHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhc-C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-CCCCCCcHHHHH
Confidence 4679999999999999988876 3 45555 7799999999999985 599999999999999 899999999999
Q ss_pred HHcCC------HHHHHHHHhcCCCCCCCCCCCC-CHHHHHHH-----hcHHHHHHHHhh-cCCceeeccCCCCCCCCCCC
Q psy2859 82 ALSGK------DDVCACLLSAGAKSYATNSVGR-TASQMAAF-----VVVAVINNYIAK-SEVDYYIVPRGLETTPKLDP 148 (534)
Q Consensus 82 ~~~g~------~~iv~~Ll~~ga~~~~~~~~G~-TpL~~A~~-----~~~~~i~~~L~~-~~~~~~~~~~~~~~~~~~~~ 148 (534)
+..|+ .++|++||++|+++|.+|..|. ||||+|+. .+..+++++|+. .|++++. .|.
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~----------~d~ 152 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI----------KDK 152 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC----------CCT
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc----------cCC
Confidence 99987 6789999999999999999999 99999998 456779999999 9999854 478
Q ss_pred CCCchHHHHHHhcCchHHHHHHhh
Q psy2859 149 ILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 149 ~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
.|.||||+|+..|+.++|++|+++
T Consensus 153 ~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 153 WGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp TSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHH
Confidence 899999999999999999999865
No 42
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=2.6e-26 Score=222.79 Aligned_cols=152 Identities=20% Similarity=0.249 Sum_probs=133.3
Q ss_pred CCCc-hhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHH
Q psy2859 4 PMEG-NEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAA 82 (534)
Q Consensus 4 ~~~~-~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~ 82 (534)
+.+| ++||.||..|+.+.| ++|++.|++++..+..|.||||+|+..++.+++++|++.|+++|. .|..|+||||+|+
T Consensus 83 d~~G~TpLh~A~~~g~~~~v-~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~-~d~~g~TpL~~A~ 160 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLI-PLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK-KDLSGNTPLIYAC 160 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHH-HHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHH-HHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCC-CCCCCCCHHHHHH
Confidence 3444 556666666666555 555566999999999999999999999999999999999999999 8999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcC
Q psy2859 83 LSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVN 162 (534)
Q Consensus 83 ~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 162 (534)
..|+.++|++||++|+++|.++..|+||||+|+..|+.+++++|++.|++++. .|..|.||||+|+.++
T Consensus 161 ~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~----------~d~~G~TpL~~A~~~~- 229 (269)
T 4b93_B 161 SGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV----------LNKRQRTAVDCAEQNS- 229 (269)
T ss_dssp HTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC----------CCTTSCCSGGGSCTTC-
T ss_pred HCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC----------cCCCCCCHHHHHHhCC-
Confidence 99999999999999999999999999999999999999999999999999854 4788999999998765
Q ss_pred chHHHHH
Q psy2859 163 IHPVRVA 169 (534)
Q Consensus 163 ~~~v~~L 169 (534)
+++++|
T Consensus 230 -~i~~lL 235 (269)
T 4b93_B 230 -KIMELL 235 (269)
T ss_dssp -HHHHHT
T ss_pred -cHHHHH
Confidence 455543
No 43
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=3.2e-26 Score=232.19 Aligned_cols=197 Identities=17% Similarity=0.148 Sum_probs=158.3
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK 86 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~ 86 (534)
.++||.||..|+.+.|..||.. |+++|..|..|+||||+|+..|+.++|++|+++|++++. ..|.||||+|+..|+
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~g~t~L~~A~~~g~ 96 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIET-GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL---WHGQKPIHLAVMANK 96 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC---BTTBCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc---cCCCCHHHHHHHcCC
Confidence 4667777777877777776654 999999999999999999999999999999999997653 478899999999999
Q ss_pred HHHHHHHHhc----CCCCCC-----------------CCCCCCCHHHHHHHhc--HHHHHHHHhhcCCceeeccCCCCCC
Q psy2859 87 DDVCACLLSA----GAKSYA-----------------TNSVGRTASQMAAFVV--VAVINNYIAKSEVDYYIVPRGLETT 143 (534)
Q Consensus 87 ~~iv~~Ll~~----ga~~~~-----------------~~~~G~TpL~~A~~~~--~~~i~~~L~~~~~~~~~~~~~~~~~ 143 (534)
.++|++|++. |++++. .+..|.||||+|+..| +.+++++|++.|++++.
T Consensus 97 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-------- 168 (364)
T 3ljn_A 97 TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA-------- 168 (364)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC--------
T ss_pred HHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc--------
Confidence 9999999988 777776 7788899999999988 88999999999888743
Q ss_pred CCCCCCCCchHHHHHHhcCchHHHHHHhh-----------------CCcccccccchHHHHHHHHHhhhhcCCCccc---
Q psy2859 144 PKLDPILAEPLHTFIMQVNIHPVRVALNL-----------------LPSLISHLPSVRKVVSLLSEKQMKAGPETNE--- 203 (534)
Q Consensus 144 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------------~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--- 203 (534)
.+..|.||||+|+..|+.++|++|++. +|++.+...+...++++|++.+ .+++.
T Consensus 169 --~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g----ad~~~~d~ 242 (364)
T 3ljn_A 169 --KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG----IDVNMEDN 242 (364)
T ss_dssp --CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT----CCTTCCCT
T ss_pred --cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC----CCCCCCCC
Confidence 366788899999999999999988852 7888888888888888886543 33322
Q ss_pred -------ccccCCCcchHHHHHHHh
Q psy2859 204 -------IIQGDKPCDLVELFVRKI 221 (534)
Q Consensus 204 -------~l~~~~~~~~~~~~l~k~ 221 (534)
+....+..++..+.+...
T Consensus 243 ~g~tpL~~A~~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 243 EHTVPLYLSVRAAMVLLTKELLQKT 267 (364)
T ss_dssp TSCCHHHHHHHTCCHHHHHHHHHHS
T ss_pred CCCCHHHHHHHhChHHHHHHHHHcC
Confidence 233345556666666653
No 44
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=3.6e-25 Score=209.99 Aligned_cols=177 Identities=20% Similarity=0.227 Sum_probs=147.0
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++++.|+..|+.+.++.|+.. |++++..+..|.||||+|+..|+.+++++|+++|++++...+..|.||||+|+..|
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEA-GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred cchHHHHHHHcCChHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 45678888888888888776665 99999999999999999999999999999999999998756667999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcC-ch
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVN-IH 164 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~ 164 (534)
+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++.. +..|.||||+|+..++ .+
T Consensus 88 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~----------~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 88 HLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM----------DQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------CTTSCCHHHHHHHHCCSST
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcccc----------CCCCCcHHHHHHHhCChHH
Confidence 999999999999999999999999999999999999999999999987543 5556677777775554 56
Q ss_pred HHHHHHhh-------------CCcccccccchHHHHHHHHHh
Q psy2859 165 PVRVALNL-------------LPSLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 165 ~v~~Ll~~-------------~p~~~~~~~~~~~~~~~l~~~ 193 (534)
++++|++. +|++.+...+..++++.|.+.
T Consensus 158 ~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 199 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA 199 (240)
T ss_dssp THHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 66666643 355556666666666666554
No 45
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=8.6e-26 Score=220.08 Aligned_cols=155 Identities=19% Similarity=0.178 Sum_probs=137.4
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCC-CCccCCCCCCcHHHHHH-----HcCCHHHHHHHHHCCCCCCCCCCCCCchHHH
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKL-RVDLYDEHGMTPLQHAA-----YKGNKQICQLLLDHGADVNSGRHEHGYSALH 79 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~-~~n~~d~~g~TpLh~Aa-----~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh 79 (534)
+.++|+.|+..|+.+.|..||.. |+ ++|..|..|+||||+|+ ..++.+++++|++.|++++. .+..|.||||
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh 188 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDS-GVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAK-ASQAGQTALM 188 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHT-SCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCC-CTTTCCCHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHC-CCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccc-cCCCCCCHHH
Confidence 34666666667776666655555 76 99999999999999999 66889999999999998888 8889999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhh-cCCceeeccCCCCCCCCCCCCCCchHHHHH
Q psy2859 80 FAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAK-SEVDYYIVPRGLETTPKLDPILAEPLHTFI 158 (534)
Q Consensus 80 ~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~-~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 158 (534)
+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.+++++|+. .|++++. .|..|.||||+|+
T Consensus 189 ~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~----------~d~~g~TpL~~A~ 258 (276)
T 4hbd_A 189 LAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL----------TDRDGSTALMVAL 258 (276)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC----------CCTTSCCHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC----------cCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 8999743 4778999999999
Q ss_pred HhcCchHHHHHHhh
Q psy2859 159 MQVNIHPVRVALNL 172 (534)
Q Consensus 159 ~~~~~~~v~~Ll~~ 172 (534)
..|+.+++++|+++
T Consensus 259 ~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 259 DAGQSEIASMLYSR 272 (276)
T ss_dssp HHTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHhc
Confidence 99999999999986
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=5.3e-26 Score=215.99 Aligned_cols=156 Identities=19% Similarity=0.153 Sum_probs=138.4
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC------CCCCCCCCchHHHH
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADV------NSGRHEHGYSALHF 80 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~v------n~~~~~~G~TpLh~ 80 (534)
.++|+.|+..|+.+ +.++|.+.|++++.+|..|+||||+|+..|+.+++++|+++|+++ +. .+..|.||||+
T Consensus 46 ~t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~~~~g~t~L~~ 123 (236)
T 1ikn_D 46 QTPLHLAVITNQPE-IAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA-TNYNGHTCLHL 123 (236)
T ss_dssp CCHHHHHHHTTCHH-HHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGC-CCTTCCCHHHH
T ss_pred CCHHHHHHHcCCHH-HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhc-cCCCCCCHHHH
Confidence 35556666666655 455556679999999999999999999999999999999999863 44 67889999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHH
Q psy2859 81 AALSGKDDVCACLLSAGAKSYATNS-VGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIM 159 (534)
Q Consensus 81 A~~~g~~~iv~~Ll~~ga~~~~~~~-~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 159 (534)
|+..|+.++|++|+++|++++.++. .|.||||+|+..++.+++++|++.|++++. .+..|.||||+|+.
T Consensus 124 A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~tpl~~A~~ 193 (236)
T 1ikn_D 124 ASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR----------VTYQGYSPYQLTWG 193 (236)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC----------CCTTCCCGGGGCTT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc----------ccCCCCCHHHHHHc
Confidence 9999999999999999999999998 999999999999999999999999999854 47789999999999
Q ss_pred hcCchHHHHHHhhCC
Q psy2859 160 QVNIHPVRVALNLLP 174 (534)
Q Consensus 160 ~~~~~~v~~Ll~~~p 174 (534)
.++.+++++|+++..
T Consensus 194 ~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 194 RPSTRIQQQLGQLTL 208 (236)
T ss_dssp SSCHHHHHHHHTTSC
T ss_pred cCchHHHHHHHHcch
Confidence 999999999999843
No 47
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=1.4e-25 Score=218.36 Aligned_cols=185 Identities=24% Similarity=0.290 Sum_probs=156.2
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLY-DEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~-d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
.++|+.|+..|+.+.|+.||.. |+++|.. +..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL-RKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHT
T ss_pred chHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcC
Confidence 4567777788888777766655 9999988 78899999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++............+..|.||||+|+..|+.++
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 163 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 163 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999865422111111126679999999999999999
Q ss_pred HHHHHhh-------------CCcccccccch----HHHHHHHHHh
Q psy2859 166 VRVALNL-------------LPSLISHLPSV----RKVVSLLSEK 193 (534)
Q Consensus 166 v~~Ll~~-------------~p~~~~~~~~~----~~~~~~l~~~ 193 (534)
+++|++. +|++.+...+. ..+++.|.+.
T Consensus 164 v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~ 208 (285)
T 1wdy_A 164 LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208 (285)
T ss_dssp HHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc
Confidence 9999975 44555555555 6777777653
No 48
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=6.7e-26 Score=196.12 Aligned_cols=131 Identities=18% Similarity=0.134 Sum_probs=124.1
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-CC
Q psy2859 30 KLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSV-GR 108 (534)
Q Consensus 30 g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~-G~ 108 (534)
++++|..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+. |+.+++++|+++|++++.+|.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNA-LNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC-cCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 678999999999999999999999999999999999999 89999999999999 9999999999999999999999 99
Q ss_pred CHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 109 TASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 109 TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
||||+|+..++.+++++|++.|++++. .+..|.||||+|+..++.+++++|+++
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~----------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDV----------CDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCC----------CSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCc----------cCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 999999999999999999999999744 477899999999999999999999875
No 49
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=5.3e-26 Score=219.23 Aligned_cols=163 Identities=18% Similarity=0.139 Sum_probs=134.5
Q ss_pred CCchh-HHHHH---HhCCHHHHHHHHHhCC-----------CCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q psy2859 5 MEGNE-IFDFI---SKNDIDNVQKLLSEHK-----------LRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSG 69 (534)
Q Consensus 5 ~~~~~-l~~aa---~~g~~~~v~~lL~~~g-----------~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~ 69 (534)
..|.+ ||.|+ ..|+.+.+..||.. | .+++..|..|+||||+|+..|+.++|++||++|++++.
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~- 121 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDI-AEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA- 121 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHH-HHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC-
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHh-cccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc-
Confidence 34544 44455 34666666655554 5 33455566899999999999999999999999999998
Q ss_pred CC--------------CCCchHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCCHHHHHHHhcH---------HHHH
Q psy2859 70 RH--------------EHGYSALHFAALSGKDDVCACLLS---AGAKSYATNSVGRTASQMAAFVVV---------AVIN 123 (534)
Q Consensus 70 ~~--------------~~G~TpLh~A~~~g~~~iv~~Ll~---~ga~~~~~~~~G~TpL~~A~~~~~---------~~i~ 123 (534)
.+ ..|.||||+|+..|+.++|++|++ .|++++.+|..|+||||+|+..+. .+++
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 66 689999999999999999999999 999999999999999999997655 6899
Q ss_pred HHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 124 NYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 124 ~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
++|++.|++++.... .....+..|.||||+|+..|+.++|++|+++
T Consensus 202 ~~Ll~~ga~~~~~~~---~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 247 (260)
T 3jxi_A 202 DLLLIKCAKLFPDTN---LEALLNNDGLSPLMMAAKTGKIGIFQHIIRR 247 (260)
T ss_dssp HHHHHHHHHHCTTCC---GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhCcccccccc---hhhcccCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 999999999843111 0023577899999999999999999999987
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=5.2e-26 Score=221.11 Aligned_cols=181 Identities=22% Similarity=0.286 Sum_probs=157.5
Q ss_pred CchhHHHHHHhCCHHHHHHHHH---hCCCCCc----cCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCC-------CC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLS---EHKLRVD----LYDEHGMTPLQHAAYK---GNKQICQLLLDHGADV-------NS 68 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~---~~g~~~n----~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~ga~v-------n~ 68 (534)
+.++|+.||..|+.+.|+.||. +.+.+++ ..|..|+||||+|+.. |+.++|++||++|+++ |.
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 4577888889999998888876 4688876 4588999999999987 9999999999998753 22
Q ss_pred C---CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--------------CCCCHHHHHHHhcHHHHHHHHhh---
Q psy2859 69 G---RHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNS--------------VGRTASQMAAFVVVAVINNYIAK--- 128 (534)
Q Consensus 69 ~---~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~--------------~G~TpL~~A~~~~~~~i~~~L~~--- 128 (534)
. .|..|.||||+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++
T Consensus 93 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (273)
T 2pnn_A 93 SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW 172 (273)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 1 456899999999999999999999999999999987 79999999999999999999999
Q ss_pred cCCceeeccCCCCCCCCCCCCCCchHHHHHHhcC---------chHHHHHHhh-------------------CCcccccc
Q psy2859 129 SEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVN---------IHPVRVALNL-------------------LPSLISHL 180 (534)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~~v~~Ll~~-------------------~p~~~~~~ 180 (534)
.|++++. .|..|.||||+|+..|+ .+++++|++. +|++++..
T Consensus 173 ~gad~~~----------~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~ 242 (273)
T 2pnn_A 173 QPADISA----------RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAAS 242 (273)
T ss_dssp CCCCTTC----------CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CCCCcee----------eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHH
Confidence 8999853 47789999999999998 7899999863 67888888
Q ss_pred cchHHHHHHHHHhhhh
Q psy2859 181 PSVRKVVSLLSEKQMK 196 (534)
Q Consensus 181 ~~~~~~~~~l~~~~~~ 196 (534)
.+..+++++|++.+.+
T Consensus 243 ~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 243 SGKIGVLAYILQREIH 258 (273)
T ss_dssp TTCHHHHHHHHHHHTC
T ss_pred hChHHHHHHHHHCCCC
Confidence 9999999999887764
No 51
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=3.6e-25 Score=230.09 Aligned_cols=176 Identities=20% Similarity=0.188 Sum_probs=158.9
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.||..|+.+.|+.||.. |+++|..|..|.||||+|+..|+.++|++|+++|+++|. .+..|.||||+|+..|
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQR-GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA-KAKDDQTPLHCAARIG 91 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSC-CCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHCC
Confidence 44677778888888877777765 999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+..+++.+ ..+..|.||||+|+..|+.++
T Consensus 92 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~----------~~~~~g~t~L~~A~~~g~~~~ 161 (437)
T 1n11_A 92 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA----------CMTKKGFTPLHVAAKYGKVRV 161 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC----------CCCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc----------CCCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999999999999999999999999998863 346679999999999999999
Q ss_pred HHHHHhh------------CCcccccccchHHHHHHHHHh
Q psy2859 166 VRVALNL------------LPSLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 166 v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~ 193 (534)
+++|++. +|++.+...+...+++.|.+.
T Consensus 162 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 201 (437)
T 1n11_A 162 AELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR 201 (437)
T ss_dssp HHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGG
T ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 9999976 567788888888999999654
No 52
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=7.8e-26 Score=230.22 Aligned_cols=185 Identities=17% Similarity=0.126 Sum_probs=161.8
Q ss_pred CchhHHHHHHhCCHHHHHHHH-------HhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHH
Q psy2859 6 EGNEIFDFISKNDIDNVQKLL-------SEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSAL 78 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL-------~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpL 78 (534)
+.++||.||..|+.+.+..|| .+.|+++|..|..|+||||+|+..|+.++|++|+++|++++. .+..|.|||
T Consensus 125 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~-~~~~g~t~L 203 (373)
T 2fo1_E 125 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI-YNKSERSAL 203 (373)
T ss_dssp CCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc-cCCCCCCHH
Confidence 446677777777776665554 478999999999999999999999999999999999999999 899999999
Q ss_pred HHHHHcCCHHHHHHHHhcC---CCCCCCCCCCCCHHHHHHHhc---HHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCc
Q psy2859 79 HFAALSGKDDVCACLLSAG---AKSYATNSVGRTASQMAAFVV---VAVINNYIAKSEVDYYIVPRGLETTPKLDPILAE 152 (534)
Q Consensus 79 h~A~~~g~~~iv~~Ll~~g---a~~~~~~~~G~TpL~~A~~~~---~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t 152 (534)
|+|+..|+.++|++|++.| ++++..|..|.||||+|+..+ ..+++++|++.|++++..... .....+..|.|
T Consensus 204 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~--~~~~~d~~g~t 281 (373)
T 2fo1_E 204 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA--RKDSEKYKGRT 281 (373)
T ss_dssp HHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG--GTSSSSCCCCC
T ss_pred HHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc--ccCcccccCCC
Confidence 9999999999999999998 899999999999999999997 999999999999998753211 11234668999
Q ss_pred hHHHHHHhcCchHHHHHHhh-------------CCcccccccchHHHHHHHHHh
Q psy2859 153 PLHTFIMQVNIHPVRVALNL-------------LPSLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 153 ~L~~A~~~~~~~~v~~Ll~~-------------~p~~~~~~~~~~~~~~~l~~~ 193 (534)
|||+|+..|+.++|++|++. +|++++...+..++++.|.+.
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 335 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ 335 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999999964 678889999999999999764
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=7.1e-26 Score=218.34 Aligned_cols=180 Identities=21% Similarity=0.251 Sum_probs=155.1
Q ss_pred CchhHHHHHHhCCHHHHHHHHH---hCCCCCccCC----CCCCcHHHHHH---HcCCHHHHHHHHHCCCC----------
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLS---EHKLRVDLYD----EHGMTPLQHAA---YKGNKQICQLLLDHGAD---------- 65 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~---~~g~~~n~~d----~~g~TpLh~Aa---~~g~~~iv~~Ll~~ga~---------- 65 (534)
+.++||.||..|+.+.+..+|. +.|++++..+ ..|+||||+|+ ..|+.++|++|++.|++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 5578999999999998666655 5699998765 77999999999 67999999999998855
Q ss_pred -CCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCC--------------CCCCCHHHHHHHhcHHHHHHHHhh--
Q psy2859 66 -VNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATN--------------SVGRTASQMAAFVVVAVINNYIAK-- 128 (534)
Q Consensus 66 -vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~--------------~~G~TpL~~A~~~~~~~i~~~L~~-- 128 (534)
++. .|..|.||||+|+..|+.++|++|+++|++++..+ ..|.||||+|+..|+.+++++|++
T Consensus 85 ~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 85 PFRD-VYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CBCC-SSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccc-cccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 333 45589999999999999999999999999999998 689999999999999999999999
Q ss_pred -cCCceeeccCCCCCCCCCCCCCCchHHHHHHhcC---------chHHHHHHhh-------------------CCccccc
Q psy2859 129 -SEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVN---------IHPVRVALNL-------------------LPSLISH 179 (534)
Q Consensus 129 -~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~~v~~Ll~~-------------------~p~~~~~ 179 (534)
.|++++. .|..|.||||+|+..++ .+++++|++. +|++++.
T Consensus 164 ~~ga~~~~----------~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~ 233 (260)
T 3jxi_A 164 HKQADLRR----------QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAA 233 (260)
T ss_dssp SCCCCTTC----------CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred ccCCCCcc----------cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHH
Confidence 8999843 47789999999999888 6899999855 5677788
Q ss_pred ccchHHHHHHHHHhhhh
Q psy2859 180 LPSVRKVVSLLSEKQMK 196 (534)
Q Consensus 180 ~~~~~~~~~~l~~~~~~ 196 (534)
..+..++++.|++++..
T Consensus 234 ~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 234 KTGKIGIFQHIIRREIA 250 (260)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHhCCC
Confidence 88888888888776643
No 54
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=7.9e-26 Score=219.82 Aligned_cols=164 Identities=22% Similarity=0.184 Sum_probs=135.0
Q ss_pred CCCchh-HHHHHHh---CCHHHHHHHHHhCCCC-------Cc----cCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy2859 4 PMEGNE-IFDFISK---NDIDNVQKLLSEHKLR-------VD----LYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNS 68 (534)
Q Consensus 4 ~~~~~~-l~~aa~~---g~~~~v~~lL~~~g~~-------~n----~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~ 68 (534)
+..|.+ ||.|+.. |+.+.|..||.. |++ +| ..|..|+||||+|+..|+.++|++||++|++++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~-ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDV-ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHH-HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHh-hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 445544 5555543 666666555554 644 22 2567899999999999999999999999999998
Q ss_pred CCCC--------------CCchHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCCHHHHHHHhcH---------HHH
Q psy2859 69 GRHE--------------HGYSALHFAALSGKDDVCACLLS---AGAKSYATNSVGRTASQMAAFVVV---------AVI 122 (534)
Q Consensus 69 ~~~~--------------~G~TpLh~A~~~g~~~iv~~Ll~---~ga~~~~~~~~G~TpL~~A~~~~~---------~~i 122 (534)
.+. .|.||||+|+..|+.++|++|++ .|++++.+|..|+||||+|+..++ .++
T Consensus 130 -~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~ 208 (273)
T 2pnn_A 130 -AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSM 208 (273)
T ss_dssp -CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred -cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHH
Confidence 665 79999999999999999999999 999999999999999999999866 789
Q ss_pred HHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 123 NNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 123 ~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
+++|+..|++++..... ....|..|.||||+|+..|+.++|++|+++
T Consensus 209 v~~Ll~~ga~~n~~~~~---~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 255 (273)
T 2pnn_A 209 YNEILILGAKLHPTLKL---EEITNRKGLTPLALAASSGKIGVLAYILQR 255 (273)
T ss_dssp HHHHHHHHHHHCTTCCG---GGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhhhhccccccc---ccccCCCCCCHHHHHHHhChHHHHHHHHHC
Confidence 99999999998531100 023577899999999999999999999987
No 55
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=6.5e-25 Score=213.71 Aligned_cols=173 Identities=23% Similarity=0.217 Sum_probs=123.8
Q ss_pred hhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCH
Q psy2859 8 NEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKD 87 (534)
Q Consensus 8 ~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~ 87 (534)
++|+.|+..|+.+.+.. |.+.|++++..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.
T Consensus 41 t~L~~A~~~g~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~ 118 (285)
T 1wdy_A 41 TPLHNAVQMSREDIVEL-LLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAVYGKV 118 (285)
T ss_dssp CHHHHHHHTTCHHHHHH-HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTCCBHHHHHHHTTCH
T ss_pred cHHHHHHHcCCHHHHHH-HHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCcccCCHHHHHHHhCCH
Confidence 45555555665555544 4455888888888899999999999999999999999988888 788888888888888888
Q ss_pred HHHHHHHhcCCCCCCC----------CCCCCCHHHHHHHhcHHHHHHHHhhc-CCceeeccCCCCCCCCCCCCCCchHHH
Q psy2859 88 DVCACLLSAGAKSYAT----------NSVGRTASQMAAFVVVAVINNYIAKS-EVDYYIVPRGLETTPKLDPILAEPLHT 156 (534)
Q Consensus 88 ~iv~~Ll~~ga~~~~~----------~~~G~TpL~~A~~~~~~~i~~~L~~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~ 156 (534)
+++++|+++|++++.. +..|.||||+|+..++.+++++|++. |++++.. +..|.||||.
T Consensus 119 ~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----------~~~g~t~l~~ 188 (285)
T 1wdy_A 119 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC----------DNMGRNALIH 188 (285)
T ss_dssp HHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCC----------CTTSCCHHHH
T ss_pred HHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCcc----------CCCCCCHHHH
Confidence 8888888888888776 67788888888888888888888876 7776443 3344555555
Q ss_pred HHHhcC----chHHHHHHhh------------CCcccccccchHHHHHHHHH
Q psy2859 157 FIMQVN----IHPVRVALNL------------LPSLISHLPSVRKVVSLLSE 192 (534)
Q Consensus 157 A~~~~~----~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~ 192 (534)
|+..++ .+++++|++. +|++.+...+...+++.|.+
T Consensus 189 a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp HHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 555544 4444444433 34444444444444444443
No 56
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=1.2e-25 Score=220.01 Aligned_cols=179 Identities=14% Similarity=0.133 Sum_probs=153.0
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-chHHHHHHHc
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHG-YSALHFAALS 84 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G-~TpLh~A~~~ 84 (534)
+.++|+.|+..|+.+.+. +|.++|+++|.+|..|+||||+|+..|+.++|++|+++|++++. .+..| .||||+|+..
T Consensus 62 g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVK-ILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF-YGKTGWKTSFYHAVML 139 (285)
T ss_dssp TCCHHHHHTTSSSCHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG-CSSSGGGSHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHH-HHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCc-cCCCCCCCHHHHHHHc
Confidence 345666666666666555 55556999999999999999999999999999999999999998 88888 7999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCch-HHHHHHhcCc
Q psy2859 85 GKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEP-LHTFIMQVNI 163 (534)
Q Consensus 85 g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~-L~~A~~~~~~ 163 (534)
|+.+++++|+++|+++... ..|.||||+|+..|+.+++++|++.|++++. .+..|.|| ||+|+..++.
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~----------~~~~g~t~~L~~A~~~~~~ 208 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNT----------NNSLLFIPDIKLAIDNKDI 208 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCT----------TCCCBCCTTHHHHHHHTCH
T ss_pred CCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCc----------ccCCCCChHHHHHHHcCCH
Confidence 9999999999999887333 2899999999999999999999999999843 47789997 9999999999
Q ss_pred hHHHHHHhh-----CCcccccccchHHHHHHHHHhhhhc
Q psy2859 164 HPVRVALNL-----LPSLISHLPSVRKVVSLLSEKQMKA 197 (534)
Q Consensus 164 ~~v~~Ll~~-----~p~~~~~~~~~~~~~~~l~~~~~~~ 197 (534)
+++++|+++ .....+...+..+++++|.+.+...
T Consensus 209 ~~v~~Ll~~gad~~~~~~~a~~~~~~~iv~~Ll~~g~~~ 247 (285)
T 3kea_A 209 EMLQALFKYDINIYSANLENVLLDDAEIAKMIIEKHVEY 247 (285)
T ss_dssp HHHHHHTTSCBCSTTTTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCChhhhhcCCHHHHHHHHHcCCCC
Confidence 999999998 2234566777888999998877644
No 57
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=1.1e-24 Score=218.97 Aligned_cols=176 Identities=24% Similarity=0.267 Sum_probs=154.5
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK 86 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~ 86 (534)
.++||.||..|+.+.|+.|| +.|+++|..|..|+||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|+
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLL-QHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNA-MDLWQFTPLHEAASKNR 136 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCC
Confidence 45666666666666555555 55999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCC------------------------------------------------------CCCCCHHH
Q psy2859 87 DDVCACLLSAGAKSYATN------------------------------------------------------SVGRTASQ 112 (534)
Q Consensus 87 ~~iv~~Ll~~ga~~~~~~------------------------------------------------------~~G~TpL~ 112 (534)
.+++++|+++|++++..+ ..|.||||
T Consensus 137 ~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~ 216 (351)
T 3utm_A 137 VEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALH 216 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHH
T ss_pred HHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHH
Confidence 999999999999987654 45678999
Q ss_pred HHHHh---cHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh------------CCccc
Q psy2859 113 MAAFV---VVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL------------LPSLI 177 (534)
Q Consensus 113 ~A~~~---~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~ 177 (534)
+|+.. +..+++++|+..|++++. .+..|.||||+|+..|+.+++++|++. +|++.
T Consensus 217 ~A~~~~~~~~~~~~~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~ 286 (351)
T 3utm_A 217 CAVASLHPKRKQVAELLLRKGANVNE----------KNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHR 286 (351)
T ss_dssp HHHHCCSTTHHHHHHHHHHTTCCTTC----------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHHhCccHHHHHHHHHHcCCCcCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 99988 778999999999999743 467899999999999999999999975 78999
Q ss_pred ccccchHHHHHHHHHhh
Q psy2859 178 SHLPSVRKVVSLLSEKQ 194 (534)
Q Consensus 178 ~~~~~~~~~~~~l~~~~ 194 (534)
+...+...++++|.+.+
T Consensus 287 A~~~~~~~~v~~Ll~~g 303 (351)
T 3utm_A 287 AALAGHLQTCRLLLSYG 303 (351)
T ss_dssp HHHHTCHHHHHHHHHTT
T ss_pred HHHcCcHHHHHHHHHcC
Confidence 99999999999997654
No 58
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=2.1e-25 Score=227.03 Aligned_cols=176 Identities=18% Similarity=0.180 Sum_probs=154.2
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCchHHHHHH
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHG---ADVNSGRHEHGYSALHFAA 82 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~g---a~vn~~~~~~G~TpLh~A~ 82 (534)
+.++|+.|+..|+.+.|. +|+++|++++..|..|.||||+|+..|+.+++++|+++| ++++. .+..|.||||+|+
T Consensus 166 g~TpL~~A~~~g~~~iv~-~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 166 ENTPLMLAVLARRRRLVA-YLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE-LDRNGMTALMIVA 243 (373)
T ss_dssp SCCHHHHHHHHTCHHHHH-HHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC-CCTTSCCHHHHHH
T ss_pred CCCHHHHHHHcChHHHHH-HHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh-cCCCCCCHHHHHH
Confidence 345666666677666555 555569999999999999999999999999999999998 89998 8999999999999
Q ss_pred HcC---CHHHHHHHHhcCCCCCC--------CCCCCCCHHHHHHHhcHHHHHHHHhhcC-CceeeccCCCCCCCCCCCCC
Q psy2859 83 LSG---KDDVCACLLSAGAKSYA--------TNSVGRTASQMAAFVVVAVINNYIAKSE-VDYYIVPRGLETTPKLDPIL 150 (534)
Q Consensus 83 ~~g---~~~iv~~Ll~~ga~~~~--------~~~~G~TpL~~A~~~~~~~i~~~L~~~~-~~~~~~~~~~~~~~~~~~~g 150 (534)
..| +.+++++|+++|++++. .|..|.||||+|+..|+.+++++|+..+ ++++ ..|..|
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n----------~~d~~g 313 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD----------KQDEDG 313 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT----------CCCTTC
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc----------CcCCCC
Confidence 998 89999999999999886 5779999999999999999999999876 8874 347789
Q ss_pred CchHHHHHHhcCchHHHHHHhh------------CCcccccccchHHHHHHHHHh
Q psy2859 151 AEPLHTFIMQVNIHPVRVALNL------------LPSLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 151 ~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~ 193 (534)
.||||+|+..|+.++|++|+++ +|++++...+..+++++|.+.
T Consensus 314 ~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~ 368 (373)
T 2fo1_E 314 KTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 368 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 9999999999999999999987 577888888888999988653
No 59
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=4.2e-25 Score=223.97 Aligned_cols=126 Identities=13% Similarity=0.100 Sum_probs=64.5
Q ss_pred CCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCC-----CCCCCCCCC
Q psy2859 36 YDEHGMTPLQHAAYKG--NKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAK-----SYATNSVGR 108 (534)
Q Consensus 36 ~d~~g~TpLh~Aa~~g--~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~-----~~~~~~~G~ 108 (534)
.|..|.||||+|+..| +.++|++|+++|++++. .+..|.||||+|+..|+.++|++|+++|++ ++..|..|.
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA-KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 4444555555555555 55555555555555554 455555555555555555555555555544 555555555
Q ss_pred CHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 109 TASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 109 TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
||||+|+..|+.+++++|++.|++++. .|..|.||||+|+..|+.++|++|++.
T Consensus 213 t~L~~A~~~g~~~~v~~Ll~~gad~~~----------~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 213 SHLHWAILINWEDVAMRFVEMGIDVNM----------EDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTTCCTTC----------CCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCC----------CCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence 555555555555555555555555422 234455555555555555555555543
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.92 E-value=3.4e-25 Score=203.46 Aligned_cols=151 Identities=16% Similarity=0.159 Sum_probs=138.5
Q ss_pred CCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHH
Q psy2859 32 RVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTAS 111 (534)
Q Consensus 32 ~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL 111 (534)
.+|.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++..|..|.|||
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLED-KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPL 105 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccccc-ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 4577899999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred HHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh------------CCccccc
Q psy2859 112 QMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL------------LPSLISH 179 (534)
Q Consensus 112 ~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~ 179 (534)
|+|+..++.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++. +|++++.
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLEHGANVND----------RNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASAR 175 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSC----------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCC----------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 999999999999999999999853 477899999999999999999999986 5666777
Q ss_pred ccchHHHHHHHHHh
Q psy2859 180 LPSVRKVVSLLSEK 193 (534)
Q Consensus 180 ~~~~~~~~~~l~~~ 193 (534)
..+..++++.|.+.
T Consensus 176 ~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 176 IFGRQEVIKIFTEV 189 (192)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HhCcHHHHHHHHhc
Confidence 77777888877653
No 61
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=1.5e-26 Score=218.87 Aligned_cols=160 Identities=25% Similarity=0.265 Sum_probs=141.0
Q ss_pred hhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCH
Q psy2859 8 NEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKD 87 (534)
Q Consensus 8 ~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~ 87 (534)
++|+.|+..|+.+.|+.||.. |+++|.+|..|+||||+|+..|+.++|++|+++|+++|. .|..|+||||+|+..|+.
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~-~d~~g~tpLh~A~~~g~~ 100 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNS-PDSHGWTPLHCAASCNDT 100 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCH
Confidence 557778888888888877765 999999999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHHHhcCCCCCCCC-CCCCCHHHHH--HHhcHHHHHHHHhhcCCceeeccCCCC-------------------C---
Q psy2859 88 DVCACLLSAGAKSYATN-SVGRTASQMA--AFVVVAVINNYIAKSEVDYYIVPRGLE-------------------T--- 142 (534)
Q Consensus 88 ~iv~~Ll~~ga~~~~~~-~~G~TpL~~A--~~~~~~~i~~~L~~~~~~~~~~~~~~~-------------------~--- 142 (534)
++|++|+++|++++..+ ..|+||||+| +..++.+++++|++.|++++..+.+.. .
T Consensus 101 ~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~ 180 (229)
T 2vge_A 101 VICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVT 180 (229)
T ss_dssp HHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEE
T ss_pred HHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCcccccccc
Confidence 99999999999999986 6999999999 899999999999999988766543210 0
Q ss_pred CCCCCCCCCchHHHHHHhcCchHHHHH
Q psy2859 143 TPKLDPILAEPLHTFIMQVNIHPVRVA 169 (534)
Q Consensus 143 ~~~~~~~g~t~L~~A~~~~~~~~v~~L 169 (534)
....|..|.||||+|+..|+.++|+.+
T Consensus 181 ~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 181 VLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp EEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred ccccCCCcccHHHHHHHcCCcceeehh
Confidence 122466799999999999999998764
No 62
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=1.9e-24 Score=224.55 Aligned_cols=182 Identities=23% Similarity=0.238 Sum_probs=96.1
Q ss_pred hHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHH
Q psy2859 9 EIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDD 88 (534)
Q Consensus 9 ~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~ 88 (534)
+++.|+..|+.+.+. +|.++|+++|..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+
T Consensus 149 ~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~ 226 (437)
T 1n11_A 149 PLHVAAKYGKVRVAE-LLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS-PAWNGYTPLHIAAKQNQVE 226 (437)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCC-CCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHH-HHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHHcCCHH
Confidence 334444444433333 33333555555555555555555555555555555555555555 4555555555555555555
Q ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCC-----------------------CCCC
Q psy2859 89 VCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLE-----------------------TTPK 145 (534)
Q Consensus 89 iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~-----------------------~~~~ 145 (534)
++++|++.|++++..+..|.||||+|+..|+.+++++|+..+++++..+.... ..+.
T Consensus 227 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 306 (437)
T 1n11_A 227 VARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA 306 (437)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC
Confidence 55555555555555555555555555555555555555555554432211000 0022
Q ss_pred CCCCCCchHHHHHHhcCchHHHHHHhh------------CCcccccccchHHHHHHHHH
Q psy2859 146 LDPILAEPLHTFIMQVNIHPVRVALNL------------LPSLISHLPSVRKVVSLLSE 192 (534)
Q Consensus 146 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~ 192 (534)
.+..|.||||+|+..|+.++|++|++. +|++.+...+..+++++|.+
T Consensus 307 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 365 (437)
T 1n11_A 307 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK 365 (437)
T ss_dssp CCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHH
Confidence 345566666666666666666666654 45566666666666666644
No 63
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.8e-25 Score=212.93 Aligned_cols=155 Identities=15% Similarity=0.182 Sum_probs=115.1
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
.|.++++.|...+...+.+.|+++|++++. +..|.||||+|+..|+.++|++||+.|+++|. .|..|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL-PNDEGITALHNAVCAG 81 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC-CCTTSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcC
Confidence 344444444444544455555566999986 47899999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCC-chHHHH--HHhcC
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILA-EPLHTF--IMQVN 162 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~-t~L~~A--~~~~~ 162 (534)
+.++|++|+++|+++|.+|..|+||||+|+..++.+++++|+++|++++.. +..|. ||||+| +..|+
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~----------~~~~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAM----------TYSDMQTAADKCEEMEEGY 151 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------CSSSCCCHHHHCCSSSTTC
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccee----------cCCCCcchHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999998543 44554 999999 78899
Q ss_pred chHHHHHHhh
Q psy2859 163 IHPVRVALNL 172 (534)
Q Consensus 163 ~~~v~~Ll~~ 172 (534)
.+++++|++.
T Consensus 152 ~~~~~~Ll~~ 161 (239)
T 1ycs_B 152 TQCSQFLYGV 161 (239)
T ss_dssp CCHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999987
No 64
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=2.1e-24 Score=216.34 Aligned_cols=175 Identities=20% Similarity=0.189 Sum_probs=136.6
Q ss_pred hhHHHHHHhCCHHHHHHHHHhCCCCCccC----------CCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCch
Q psy2859 8 NEIFDFISKNDIDNVQKLLSEHKLRVDLY----------DEHGMTPLQHAAYKGNKQICQLLLD-HGADVNSGRHEHGYS 76 (534)
Q Consensus 8 ~~l~~aa~~g~~~~v~~lL~~~g~~~n~~----------d~~g~TpLh~Aa~~g~~~iv~~Ll~-~ga~vn~~~~~~G~T 76 (534)
++++.|+..|+.+.+. +|.++|++++.. +..|.||||+|+..|+.++|++||+ .|+++|. .+..|.|
T Consensus 127 t~l~~A~~~~~~~~~~-~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~-~d~~g~t 204 (337)
T 4g8k_A 127 TAFMEAAVYGKVKALK-FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA-CDNMGRN 204 (337)
T ss_dssp BHHHHHHHTTCHHHHH-HHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTC-CCTTSCC
T ss_pred CHHHHHHHcCcHHHHH-HHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCc-cCCCCCc
Confidence 4455555555555544 444558887653 3458899999999999999999885 5899988 7888999
Q ss_pred HHHHHHHcCC----HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhc-CCceeeccCCCCCCCCCCCCCC
Q psy2859 77 ALHFAALSGK----DDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKS-EVDYYIVPRGLETTPKLDPILA 151 (534)
Q Consensus 77 pLh~A~~~g~----~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~-~~~~~~~~~~~~~~~~~~~~g~ 151 (534)
|||.++..+. ..++++|+++|+++|.+|..|+||||+|+..+..+++++|+.. +++++. .|..|.
T Consensus 205 ~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~----------~d~~G~ 274 (337)
T 4g8k_A 205 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND----------TDSDGK 274 (337)
T ss_dssp HHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTC----------BCTTSC
T ss_pred HHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccC----------cCCCCC
Confidence 9888876554 3578888899999998888999999999998888888888764 677643 467899
Q ss_pred chHHHHHHhcCchHHHHHHhh-------CCcccccccchHHHHHHHHHhh
Q psy2859 152 EPLHTFIMQVNIHPVRVALNL-------LPSLISHLPSVRKVVSLLSEKQ 194 (534)
Q Consensus 152 t~L~~A~~~~~~~~v~~Ll~~-------~p~~~~~~~~~~~~~~~l~~~~ 194 (534)
||||+|+..|+.++|++|+++ +|++.+...+..+++++|++.+
T Consensus 275 TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~iv~~Ll~~G 324 (337)
T 4g8k_A 275 TALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVKVLLSHG 324 (337)
T ss_dssp BHHHHHHHTTCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHHHHHHHHCc
Confidence 999999999999999999987 5777788888888888886543
No 65
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=2.4e-24 Score=215.99 Aligned_cols=164 Identities=25% Similarity=0.305 Sum_probs=146.2
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDE-HGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~-~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
.++|+.||..|+.+.|+.||.. |+++|.++. .|+||||+|+..|+.++|++||++|++++. .+..+.+|++.++..+
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~-Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL-RKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHT
T ss_pred ChHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhh-hccCCCchhHHHHhcc
Confidence 4567788888888888777765 999999875 599999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
...++..++..+++++..|..|.||||+|+..+..+++++|+..|++++............+..|.||||+|+..|+.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~ 183 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 183 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHH
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHH
Confidence 99999999999999999999999999999999999999999999999887655554445567789999999999999999
Q ss_pred HHHHHhh
Q psy2859 166 VRVALNL 172 (534)
Q Consensus 166 v~~Ll~~ 172 (534)
|++||+.
T Consensus 184 v~~LL~~ 190 (337)
T 4g8k_A 184 LKILLDE 190 (337)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999964
No 66
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=2.5e-25 Score=222.32 Aligned_cols=162 Identities=19% Similarity=0.127 Sum_probs=132.9
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCCcc-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC--
Q psy2859 10 IFDFISKNDIDNVQKLLSEHKLRVDL-YDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK-- 86 (534)
Q Consensus 10 l~~aa~~g~~~~v~~lL~~~g~~~n~-~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~-- 86 (534)
+++++..+....+.++|.+.|+++|. +|..|+||||+|+..|+.++|++||++|+++|. .+..|+||||+|+..|+
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~-~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLY-GDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTB-CCTTCCCHHHHHHHSSHHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHhcccc
Confidence 34667777788899999999999999 899999999999999999999999999999998 89999999999999998
Q ss_pred -HHHHHHHHhcC-CCCCCCCCCCCCHHHHHHH----hcHHHHHHHHhhc--------------------CCceeeccCCC
Q psy2859 87 -DDVCACLLSAG-AKSYATNSVGRTASQMAAF----VVVAVINNYIAKS--------------------EVDYYIVPRGL 140 (534)
Q Consensus 87 -~~iv~~Ll~~g-a~~~~~~~~G~TpL~~A~~----~~~~~i~~~L~~~--------------------~~~~~~~~~~~ 140 (534)
.++++.|++.+ ++++.+|..|+||||+|+. .++.+++++|++. |++++..+...
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g 258 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER 258 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccC
Confidence 78888888886 7899999999999999999 7899999999887 45544432211
Q ss_pred C---------------CCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 141 E---------------TTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 141 ~---------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
. ..+..|..|.||||+|+..|+.++|++|+++
T Consensus 259 ~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ 305 (327)
T 1sw6_A 259 KDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDY 305 (327)
T ss_dssp -CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 1 1345677899999999999999999999877
No 67
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=2.8e-25 Score=216.44 Aligned_cols=173 Identities=17% Similarity=0.198 Sum_probs=153.7
Q ss_pred hHHHHHHhCCHHHHHHHHHhCCCC--CccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCchHHHHHH---
Q psy2859 9 EIFDFISKNDIDNVQKLLSEHKLR--VDLYDEHGMTPLQHAAYKGNKQICQLLLDHGA-DVNSGRHEHGYSALHFAA--- 82 (534)
Q Consensus 9 ~l~~aa~~g~~~~v~~lL~~~g~~--~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga-~vn~~~~~~G~TpLh~A~--- 82 (534)
+++.++..++...+..++.. +.+ +|..|..|+||||+|+..|+.++|++|++.|+ +++. .+..|+||||+|+
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~-~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSAR-LLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDK-QNRAGYSPIMLTALAT 156 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHH-HHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTC-CCTTSCCHHHHGGGCC
T ss_pred CCCHHHHHHHHHHHHHHHHH-HHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCC-CCCCCCCHHHHHHHHH
Confidence 44566777777777777654 444 88999999999999999999999999999998 9998 8999999999999
Q ss_pred --HcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHh
Q psy2859 83 --LSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQ 160 (534)
Q Consensus 83 --~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 160 (534)
..++.+++++|++.|++++..+..|+||||+|+..|+.+++++|++.|++++. .|..|.||||+|+..
T Consensus 157 ~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~----------~d~~G~TpLh~A~~~ 226 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV----------QDDDGSTALMCACEH 226 (276)
T ss_dssp CCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC----------CCCCCCCHHHHHHHC
Confidence 67899999999999999999999999999999999999999999999999854 477899999999999
Q ss_pred cCchHHHHHHh-h------------CCcccccccchHHHHHHHHHh
Q psy2859 161 VNIHPVRVALN-L------------LPSLISHLPSVRKVVSLLSEK 193 (534)
Q Consensus 161 ~~~~~v~~Ll~-~------------~p~~~~~~~~~~~~~~~l~~~ 193 (534)
|+.++|++|++ . +|++++...+..++++.|.++
T Consensus 227 g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 227 GHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp TCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999999998 3 677888888888888888654
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=2.4e-24 Score=193.12 Aligned_cols=147 Identities=18% Similarity=0.165 Sum_probs=135.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhc
Q psy2859 39 HGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVV 118 (534)
Q Consensus 39 ~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~ 118 (534)
.|.||||+|+..|+.+++++|++.|++++. .+..|+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINH-TDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCC-CCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 589999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh------------CCcccccccchHHH
Q psy2859 119 VAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL------------LPSLISHLPSVRKV 186 (534)
Q Consensus 119 ~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~~~~~~~ 186 (534)
+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++. +|++++...+...+
T Consensus 81 ~~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 150 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNE----------YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV 150 (167)
T ss_dssp CHHHHHHHHHHTCCTTC----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHCCCCCCc----------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 99999999999999743 477899999999999999999999986 56777778888888
Q ss_pred HHHHHHhhhh
Q psy2859 187 VSLLSEKQMK 196 (534)
Q Consensus 187 ~~~l~~~~~~ 196 (534)
++.|.+...+
T Consensus 151 ~~~L~~~~~~ 160 (167)
T 3v31_A 151 QQVIESHLLK 160 (167)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888765544
No 69
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=1.1e-24 Score=193.07 Aligned_cols=140 Identities=19% Similarity=0.214 Sum_probs=115.9
Q ss_pred CCCchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCch-HHHHHH
Q psy2859 4 PMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYS-ALHFAA 82 (534)
Q Consensus 4 ~~~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~T-pLh~A~ 82 (534)
..+.++|+.|+..|+.+.|+.||.. |+++|..|..|+||||+|+ .|+.+++++|+++|++++. .+..|.| |||+|+
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~-~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC-ADPATLTRPVHDAA 86 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-CCTTTCCCHHHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHH
Confidence 3456788888888888888777755 9999999999999999985 9999999999999999999 8999999 999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHH
Q psy2859 83 LSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHT 156 (534)
Q Consensus 83 ~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 156 (534)
..|+.++|++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++.. +..|.||.+.
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~----------~~~g~t~~~~ 150 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS----------NHARIDAAEG 150 (156)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------------
T ss_pred HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc----------CcCcCccccc
Confidence 999999999999999999999999999999999999999999999999998654 5567777653
No 70
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=4.2e-24 Score=184.74 Aligned_cols=123 Identities=25% Similarity=0.296 Sum_probs=86.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHh
Q psy2859 38 EHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFV 117 (534)
Q Consensus 38 ~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~ 117 (534)
..|.||||+|+..|+.+++++|+++|++++. .|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNA-KDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 4466777777777777777777777777776 666777777777777777777777777777777777777777777777
Q ss_pred cHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHh
Q psy2859 118 VVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALN 171 (534)
Q Consensus 118 ~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 171 (534)
++.+++++|++.|++++. .|..|.||||+|+..++.+++++|++
T Consensus 91 ~~~~~v~~Ll~~g~~~~~----------~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNA----------QDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp TCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCcC----------cCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 777777777777766532 35567777777777777777777665
No 71
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2e-24 Score=186.78 Aligned_cols=124 Identities=24% Similarity=0.292 Sum_probs=114.1
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CchHHHHHHHc
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEH-GYSALHFAALS 84 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~-G~TpLh~A~~~ 84 (534)
+.++|+.|+..|+.+.++.||.. |+++|.+|..|+||||+|+. |+.+++++|+++|++++. .+.. |.||||+|+..
T Consensus 12 g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~ 88 (136)
T 1d9s_A 12 SDAGLATAAARGQVETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC-ADPATLTRPVHDAARE 88 (136)
T ss_dssp CSCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC-CBTTTTBCHHHHHHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC-cCCCCCCCHHHHHHHc
Confidence 45667777777777776666655 99999999999999999999 999999999999999999 8888 99999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCc
Q psy2859 85 GKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVD 132 (534)
Q Consensus 85 g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~ 132 (534)
|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|+|
T Consensus 89 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 89 GFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999875
No 72
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.2e-23 Score=181.97 Aligned_cols=123 Identities=29% Similarity=0.435 Sum_probs=114.7
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
..++++.||..|+.+.++.||.. |+++|..|..|+||||+|+..|+.+++++|+++|+++|. .|..|.||||+|+..|
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA-VDAIGFTPLHLAAFIG 91 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHhCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcC
Confidence 35678888888888888777765 999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcC
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSE 130 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~ 130 (534)
+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.|
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999865
No 73
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=1.2e-24 Score=188.32 Aligned_cols=131 Identities=19% Similarity=0.133 Sum_probs=114.9
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCC
Q psy2859 30 KLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRT 109 (534)
Q Consensus 30 g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~T 109 (534)
|+|+ .+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 5677 6789999999999999999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 110 ASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 110 pL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
|||+|+..++.+++++|++.|++++. .+..|.|||++|+..+..+++.+|.+.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNA----------VNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC----------CCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 99999999999999999999998743 477899999999988888877666543
No 74
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=9.3e-24 Score=189.77 Aligned_cols=145 Identities=27% Similarity=0.296 Sum_probs=130.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Q psy2859 37 DEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAF 116 (534)
Q Consensus 37 d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~ 116 (534)
...+.||||.|+..|+.++|++|+++|+++|. .+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNA-EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 45678999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh------------CCcccccccchH
Q psy2859 117 VVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL------------LPSLISHLPSVR 184 (534)
Q Consensus 117 ~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~~~~~ 184 (534)
.++.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++. +|++++...+..
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNA----------NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNE 159 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cCCHHHHHHHHHcCCCCCC----------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence 9999999999999999743 467899999999999999999999986 456666666777
Q ss_pred HHHHHHHH
Q psy2859 185 KVVSLLSE 192 (534)
Q Consensus 185 ~~~~~l~~ 192 (534)
++++.|.+
T Consensus 160 ~~~~~L~~ 167 (169)
T 2y1l_E 160 DLAEILQK 167 (169)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 77777643
No 75
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.90 E-value=1.1e-23 Score=207.08 Aligned_cols=172 Identities=19% Similarity=0.198 Sum_probs=131.9
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK 86 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~ 86 (534)
.++|+.|+..|+.+.|. +|.++|+++|..|..|+||||+|+..|+.++|++|+++|++++. .+..|.||||+|+..|+
T Consensus 74 ~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~ 151 (299)
T 1s70_B 74 LTALHQACIDDNVDMVK-FLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA-VNSEGDTPLDIAEEEAM 151 (299)
T ss_dssp CBHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCSHHH
T ss_pred CCHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHhcch
Confidence 35666666666666555 55556999999999999999999999999999999999999998 78888888888888888
Q ss_pred HHHHHHHHhc-CCCCC--------------------------CCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCC
Q psy2859 87 DDVCACLLSA-GAKSY--------------------------ATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRG 139 (534)
Q Consensus 87 ~~iv~~Ll~~-ga~~~--------------------------~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~ 139 (534)
.++++.|+.. |++++ ..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 152 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~---- 227 (299)
T 1s70_B 152 EELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI---- 227 (299)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC----
T ss_pred HHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC----
Confidence 8887766653 44432 2456788888888888888888888888887643
Q ss_pred CCCCCCCCCCCCchHHHHHHhcCchHHHHH------Hhh------CCcccccccchHHHHHHH
Q psy2859 140 LETTPKLDPILAEPLHTFIMQVNIHPVRVA------LNL------LPSLISHLPSVRKVVSLL 190 (534)
Q Consensus 140 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L------l~~------~p~~~~~~~~~~~~~~~l 190 (534)
.|..|.||||+|+..|+.+++++| +.. +|++++.......+.+++
T Consensus 228 ------~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~~l~ 284 (299)
T 1s70_B 228 ------KDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQ 284 (299)
T ss_dssp ------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHHHH
T ss_pred ------cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 366788888888888888888877 221 777777665544444444
No 76
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.90 E-value=4.3e-23 Score=195.58 Aligned_cols=178 Identities=20% Similarity=0.191 Sum_probs=153.3
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYD-EHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d-~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
.++++.|+..|+.+.+..|+ +.|.+++..+ ..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~ 120 (240)
T 3eu9_A 43 VTLLHWAAINNRIDLVKYYI-SKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSL-IDGEGCSCIHLAAQFG 120 (240)
T ss_dssp CCHHHHHHHTTCHHHHHHHH-HTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHhCCHHHHHHHH-HcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcC
Confidence 35566666666666555554 5588887654 5599999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcH-HHHHHHHhhcCCceeeccCCCCCCCCCCC-CCCchHHHHHHhcCc
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVV-AVINNYIAKSEVDYYIVPRGLETTPKLDP-ILAEPLHTFIMQVNI 163 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~-~~i~~~L~~~~~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~ 163 (534)
+.+++++|+++|++++..+..|.||||+|+..+. ..++++|+..+++++.. +. .|.||||+|+..|+.
T Consensus 121 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~----------~~~~g~t~L~~A~~~~~~ 190 (240)
T 3eu9_A 121 HTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLG----------DKYHKNTALHWAVLAGNT 190 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCC----------CTTTCCCHHHHHHHHTCH
T ss_pred HHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchh----------hccCCCcHHHHHHHcCCH
Confidence 9999999999999999999999999999997755 78999999999998543 33 689999999999999
Q ss_pred hHHHHHHhh------------CCcccccccchHHHHHHHHHhhhh
Q psy2859 164 HPVRVALNL------------LPSLISHLPSVRKVVSLLSEKQMK 196 (534)
Q Consensus 164 ~~v~~Ll~~------------~p~~~~~~~~~~~~~~~l~~~~~~ 196 (534)
+++++|+++ +|++++...+...+++.|.+....
T Consensus 191 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 191 TVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp HHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 999999986 688999999999999999775543
No 77
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=3.7e-23 Score=175.55 Aligned_cols=121 Identities=33% Similarity=0.431 Sum_probs=65.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcH
Q psy2859 40 GMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVV 119 (534)
Q Consensus 40 g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~ 119 (534)
|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 45555555555555555555555555555 45555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHh
Q psy2859 120 AVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALN 171 (534)
Q Consensus 120 ~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 171 (534)
.+++++|++.|++++ ..+..|.|||++|+..++.+++++|++
T Consensus 81 ~~~~~~Ll~~g~~~~----------~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 81 LEVVKLLLEAGADVN----------AKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp HHHHHHHHHTTCCTT----------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCc----------ccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 555555555555542 123445555555555555555555554
No 78
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=207.27 Aligned_cols=140 Identities=20% Similarity=0.239 Sum_probs=123.9
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCcc------CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCch
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDL------YDEHGMTPLQHAAYK---GNKQICQLLLDHGADVNSGRHEHGYS 76 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~------~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~ga~vn~~~~~~G~T 76 (534)
+.++|+.|+..|+...|..+|. .|+++|. .+..|+||||+|+.. |+.++|++||++|+++|. .|..|+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~-~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~-~d~~G~T 228 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFA-NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNT 228 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHH-TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC-CCTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHh-cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC-CCCCCCC
Confidence 4567999999999999998885 5999998 689999999999997 899999999999999999 8999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHH
Q psy2859 77 ALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHT 156 (534)
Q Consensus 77 pLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 156 (534)
|||+|+..|+.++|++||++|++++.+|..|.||||+|+..++.+++++|++.|++ .|.||||+
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~----------------~g~tpLh~ 292 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG----------------TFAFPLHV 292 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH----------------TTSSCCC-
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC----------------CCCChhHH
Confidence 99999999999999999999999999999999999999999999999999998876 37899999
Q ss_pred HHHhcCc
Q psy2859 157 FIMQVNI 163 (534)
Q Consensus 157 A~~~~~~ 163 (534)
|+..|+.
T Consensus 293 A~~~g~~ 299 (301)
T 2b0o_E 293 DYSWVIS 299 (301)
T ss_dssp -------
T ss_pred HHhcCCc
Confidence 9998764
No 79
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.90 E-value=1.3e-23 Score=187.03 Aligned_cols=143 Identities=22% Similarity=0.210 Sum_probs=130.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhc
Q psy2859 39 HGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVV 118 (534)
Q Consensus 39 ~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~ 118 (534)
...||||.|+..|+.+++++|+++|++++. .+..|+||||+|+. |+.+++++|+++|++++.++..|.||||+|+..+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNA-QNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTC-CCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccc-cCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 456999999999999999999999999999 89999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh-------------CCcccccccchHH
Q psy2859 119 VAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL-------------LPSLISHLPSVRK 185 (534)
Q Consensus 119 ~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------------~p~~~~~~~~~~~ 185 (534)
+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++. +|++++...+..+
T Consensus 82 ~~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNI----------EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp CHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHHHcCCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 99999999999998743 467899999999999999999999976 5666777777777
Q ss_pred HHHHHHHh
Q psy2859 186 VVSLLSEK 193 (534)
Q Consensus 186 ~~~~l~~~ 193 (534)
+++.|.+.
T Consensus 152 ~~~~Ll~~ 159 (162)
T 1ihb_A 152 VVSLMQAN 159 (162)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 88887553
No 80
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=8.7e-23 Score=173.23 Aligned_cols=125 Identities=30% Similarity=0.403 Sum_probs=117.8
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.|+..|+.+.+..|+.. |++++..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcC
Confidence 45778888888988888777765 999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCc
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVD 132 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~ 132 (534)
+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|+|
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999975
No 81
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.89 E-value=3.3e-23 Score=186.59 Aligned_cols=128 Identities=20% Similarity=0.215 Sum_probs=116.9
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.|+..|+.+.+..|| +.|+++|..|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 113 (172)
T 3v30_A 36 GFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINI-YDWNGGTPLLYAVRGN 113 (172)
T ss_dssp SCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcC
Confidence 346666777777776666655 55999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceee
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYI 135 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~ 135 (534)
+.++|++|+++|++++.+|..|.||||+|+..++.+++++|+++++++..
T Consensus 114 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 114 HVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999998754
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=1.1e-23 Score=186.75 Aligned_cols=127 Identities=18% Similarity=0.087 Sum_probs=117.4
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCC-HHH
Q psy2859 34 DLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRT-ASQ 112 (534)
Q Consensus 34 n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~T-pL~ 112 (534)
+..+..|.||||+|+..|+.++|++|+++|+++|. .+..|+||||+|+ .|+.++|++|+++|++++.+|..|.| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNA-PNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 45578899999999999999999999999999999 8999999999995 99999999999999999999999999 999
Q ss_pred HHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 113 MAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 113 ~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
+|+..++.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~----------~d~~g~tpl~~A~~~~~~~~v~~Ll~~ 133 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDV----------RDAWGRLPVDLAEELGHRDVARYLRAA 133 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSC----------CCTTCCCHHHHHHHHTCHHHHHHHSSC
T ss_pred HHHHCCCHHHHHHHHHcCCCCcc----------cCCCCCCHHHHHHHhCHHHHHHHHHHc
Confidence 99999999999999999999854 467899999999999999999999987
No 83
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.89 E-value=9.3e-23 Score=184.98 Aligned_cols=145 Identities=21% Similarity=0.204 Sum_probs=131.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Q psy2859 38 EHGMTPLQHAAYKGNKQICQLLLDH-GADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAF 116 (534)
Q Consensus 38 ~~g~TpLh~Aa~~g~~~iv~~Ll~~-ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~ 116 (534)
..+.+|||.|+..|+.++|++|++. +.+++. .+..|.||||+|+..|+.++|++|++.|++++..+..|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQ-GDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccc-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 4678999999999999999999998 678888 89999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh------------CCcccccccchH
Q psy2859 117 VVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL------------LPSLISHLPSVR 184 (534)
Q Consensus 117 ~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~~~~~ 184 (534)
.++.+++++|++.|++++. .+..|.||||+|+..++.+++++|+++ +|++++...+..
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~----------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINA----------VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRE 151 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCc----------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHH
Confidence 9999999999999999743 477899999999999999999999976 688888888888
Q ss_pred HHHHHHHHh
Q psy2859 185 KVVSLLSEK 193 (534)
Q Consensus 185 ~~~~~l~~~ 193 (534)
.+++.|.+.
T Consensus 152 ~~~~~L~~~ 160 (179)
T 3f6q_A 152 LLRERAEKM 160 (179)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 899998653
No 84
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.89 E-value=3.7e-23 Score=182.58 Aligned_cols=139 Identities=26% Similarity=0.195 Sum_probs=123.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcH
Q psy2859 40 GMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVV 119 (534)
Q Consensus 40 g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~ 119 (534)
+.||||.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 4589999999999999999999999887 48899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh------------CCcccccccchHHHH
Q psy2859 120 AVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL------------LPSLISHLPSVRKVV 187 (534)
Q Consensus 120 ~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~~~~~~~~ 187 (534)
.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++ +|++++...+..+++
T Consensus 80 ~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 80 ANIVEVLLKHGADVNA----------KDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA 149 (153)
T ss_dssp HHHHHHHHTTTCCTTC----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCCC----------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 9999999999999743 467899999999999999999999987 445555555555555
Q ss_pred HHH
Q psy2859 188 SLL 190 (534)
Q Consensus 188 ~~l 190 (534)
++|
T Consensus 150 ~~L 152 (153)
T 1awc_B 150 EIL 152 (153)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 85
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=7e-23 Score=186.61 Aligned_cols=136 Identities=26% Similarity=0.273 Sum_probs=121.2
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCchHHHHHHHcC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRH-EHGYSALHFAALSG 85 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~-~~G~TpLh~A~~~g 85 (534)
.++|+.|+..|+.+.+..||. |+++|.+|..|+||||+|+..|+.+++++|+++|+++|. .+ ..|+||||+|+..|
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH-RDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCSSSSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHHHHhcC
Confidence 466777778888887777776 999999999999999999999999999999999999998 55 89999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.+++++|+++|++++.+|..|.||||+|+..+.. ..+.++|++|+..|+.++
T Consensus 122 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~---------------------------~~~~~~l~~a~~~~~~~i 174 (183)
T 3deo_A 122 RPEVVEALVELGADIEVEDERGLTALELAREILKT---------------------------TPKGNPMQFGRRIGLEKV 174 (183)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT---------------------------CCCCSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC---------------------------cccccHHHHHHHcCHHHH
Confidence 99999999999999999999999999999875322 235789999999999999
Q ss_pred HHHHHhh
Q psy2859 166 VRVALNL 172 (534)
Q Consensus 166 v~~Ll~~ 172 (534)
+++|.++
T Consensus 175 ~~~L~~~ 181 (183)
T 3deo_A 175 INVLEGQ 181 (183)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 9998764
No 86
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=6.8e-23 Score=195.74 Aligned_cols=136 Identities=26% Similarity=0.272 Sum_probs=120.9
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCchHHHHHHHcC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRH-EHGYSALHFAALSG 85 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~-~~G~TpLh~A~~~g 85 (534)
.++||.|+..|+.+.|..||. |+++|.+|..|+||||+|+..|+.++|++|+++|+++|. .+ ..|+||||+|+..|
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH-RDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC-CCSSSCCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHHHHHcC
Confidence 456677777777777766666 999999999999999999999999999999999999998 55 88999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHP 165 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (534)
+.++|++|+++|++++.+|..|.||||+|+..+. ...+.|||++|+..|+.++
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~---------------------------~~~~~~~l~~a~~~g~~~i 175 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELAREILK---------------------------TTPKGNPMQFGRRIGLEKV 175 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT---------------------------TCCCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh---------------------------ccCCCCHHHHHHHcChHHH
Confidence 9999999999999999999999999999985311 1347899999999999999
Q ss_pred HHHHHhh
Q psy2859 166 VRVALNL 172 (534)
Q Consensus 166 v~~Ll~~ 172 (534)
+++|++.
T Consensus 176 v~~L~~~ 182 (244)
T 3ui2_A 176 INVLEGQ 182 (244)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999876
No 87
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=2.2e-23 Score=197.18 Aligned_cols=138 Identities=17% Similarity=0.107 Sum_probs=121.0
Q ss_pred HHHhCCCCCccC---CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy2859 25 LLSEHKLRVDLY---DEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSY 101 (534)
Q Consensus 25 lL~~~g~~~n~~---d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~ 101 (534)
.|++.|++++.. +..|.||||+|+..|+.++|++|++.|+++|. .|..|.||||+|+..|+.++|++|++.|++++
T Consensus 3 ~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n 81 (229)
T 2vge_A 3 SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQ-PNEEGITALHNAICGANYSIVDFLITAGANVN 81 (229)
T ss_dssp -------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 344458887655 45677889999999999999999999999999 89999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHH--HHhcCchHHHHHHhh
Q psy2859 102 ATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTF--IMQVNIHPVRVALNL 172 (534)
Q Consensus 102 ~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~ 172 (534)
.+|..|+||||+|+..|+.+++++|++.|++++.. .+..|.||||+| +..|+.+++++|++.
T Consensus 82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~---------~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ 145 (229)
T 2vge_A 82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFAT---------TLSDGATAFEKCDPYREGYADCATYLADV 145 (229)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC---------CSSTTCCTGGGCCTTSTTHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc---------cCCCCCCHHHHHHHHhcChHHHHHHHHHc
Confidence 99999999999999999999999999999998543 135799999999 999999999999987
No 88
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=7.9e-23 Score=182.74 Aligned_cols=145 Identities=19% Similarity=0.135 Sum_probs=128.9
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy2859 36 YDEHGMTPLQHAAYKGNKQICQLLLDH-GADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMA 114 (534)
Q Consensus 36 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~-ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A 114 (534)
.|..|.||||.|+..|+.++++.|++. +.+++. .+..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRD-IEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCC-TTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccc-cccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 367789999999999999999999984 567776 788999999999999999999999999999999999999999999
Q ss_pred HHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh------------CCcccccccc
Q psy2859 115 AFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL------------LPSLISHLPS 182 (534)
Q Consensus 115 ~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~p~~~~~~~~ 182 (534)
+..++.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++ +|++++.. +
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~ 151 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNV----------ADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-G 151 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC----------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-T
T ss_pred HHcCcHHHHHHHHhCCCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-C
Confidence 999999999999999999743 467899999999999999999999987 56777555 6
Q ss_pred hHHHHHHHHH
Q psy2859 183 VRKVVSLLSE 192 (534)
Q Consensus 183 ~~~~~~~l~~ 192 (534)
..+++++|.+
T Consensus 152 ~~~i~~~L~~ 161 (165)
T 3twr_A 152 DTDIQDLLRG 161 (165)
T ss_dssp CHHHHHHHHT
T ss_pred ChHHHHHHhh
Confidence 6688888854
No 89
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=1.2e-22 Score=172.18 Aligned_cols=116 Identities=28% Similarity=0.325 Sum_probs=104.3
Q ss_pred CCchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHc
Q psy2859 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALS 84 (534)
Q Consensus 5 ~~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~ 84 (534)
.+.++++.|+..|+.+.++.||. .|+++|.+|..|+||||+|+..|+.+++++|+++|+++|. .|..|+||||+|+..
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVA-KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAVYE 83 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHH-TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHH-cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHc
Confidence 34577888888888888877666 4999999999999999999999999999999999999999 899999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHH
Q psy2859 85 GKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVI 122 (534)
Q Consensus 85 g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i 122 (534)
|+.++|++|+++|++++.+|..|.||||+|...+..++
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 99999999999999999999999999999965544443
No 90
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.88 E-value=1.4e-23 Score=209.56 Aligned_cols=146 Identities=19% Similarity=0.092 Sum_probs=123.4
Q ss_pred CCCc-hhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCC---HHHHHHHHHCC-CCCCCCCCCCCchHH
Q psy2859 4 PMEG-NEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGN---KQICQLLLDHG-ADVNSGRHEHGYSAL 78 (534)
Q Consensus 4 ~~~~-~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~---~~iv~~Ll~~g-a~vn~~~~~~G~TpL 78 (534)
+..| ++||.||..|+.+.| ++|+++|+++|.+|..|+||||+|+..|+ .++++.|++.+ ++++. .+..|+|||
T Consensus 128 d~~g~TpLh~Aa~~g~~~~v-~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~-~d~~g~tpL 205 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIANLELV-KHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL-EDSMNRTIL 205 (327)
T ss_dssp STTCCCHHHHHHHTTCHHHH-HHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE-ECTTCCCHH
T ss_pred CCCCCcHHHHHHHcCCHHHH-HHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC-CCCCCCCHH
Confidence 3444 555566666665555 55555699999999999999999999999 78889999886 78998 899999999
Q ss_pred HHHHH----cCCHHHHHHHHhcCC---------------------------------------------CCCCCCCCCCC
Q psy2859 79 HFAAL----SGKDDVCACLLSAGA---------------------------------------------KSYATNSVGRT 109 (534)
Q Consensus 79 h~A~~----~g~~~iv~~Ll~~ga---------------------------------------------~~~~~~~~G~T 109 (534)
|+|+. .|+.+++++|++.++ ++|.+|..|+|
T Consensus 206 h~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~T 285 (327)
T 1sw6_A 206 HHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDT 285 (327)
T ss_dssp HHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCC
T ss_pred HHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCC
Confidence 99999 899999999998743 57888999999
Q ss_pred HHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhc
Q psy2859 110 ASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQV 161 (534)
Q Consensus 110 pL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 161 (534)
|||+|+..|+.+++++|+++|++++. .|..|.||||+|+..|
T Consensus 286 pLh~A~~~g~~~~v~~Ll~~Gad~~~----------~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 286 CLNIAARLGNISIVDALLDYGADPFI----------ANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHHHCCHHHHHHHHHTTCCTTC----------CCTTSCCGGGGTCC--
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcc----------cCCCCCCHHHHHHhcC
Confidence 99999999999999999999999854 4788999999998754
No 91
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.88 E-value=1.3e-23 Score=200.04 Aligned_cols=153 Identities=20% Similarity=0.272 Sum_probs=132.4
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGK 86 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~ 86 (534)
.++|+.|+..|+.+.|..|| +.|+++|.+|..|+||||+|+..|+.++|++|+++|+++|. .|..|+||||+|+..|+
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~~~ 115 (239)
T 1ycs_B 38 LALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNN 115 (239)
T ss_dssp HHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTC
T ss_pred hHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCC
Confidence 46677788888887776666 45999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCC-CHHHHH--HHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcC
Q psy2859 87 DDVCACLLSAGAKSYATNSVGR-TASQMA--AFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVN 162 (534)
Q Consensus 87 ~~iv~~Ll~~ga~~~~~~~~G~-TpL~~A--~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 162 (534)
.++|++|+++|++++..+..|. ||||+| +..|+.+++++|+..|++++..+.+. .....+..+.+++++++..|.
T Consensus 116 ~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~-~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 116 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGV-IYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGE-EEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccce-EEEEeccCCCCCCcccccCCC
Confidence 9999999999999999998877 999999 67799999999999999987653332 123446778888888777665
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=7.2e-23 Score=173.66 Aligned_cols=113 Identities=20% Similarity=0.135 Sum_probs=104.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Q psy2859 37 DEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAF 116 (534)
Q Consensus 37 d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~ 116 (534)
+..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTS-CCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 56789999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHh
Q psy2859 117 VVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQ 160 (534)
Q Consensus 117 ~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 160 (534)
.++.+++++|++.|++++ ..+..|.||||+|...
T Consensus 83 ~~~~~~v~~Ll~~ga~~~----------~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKT----------VKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HTCHHHHHHHHHTTCCTT----------CCCTTSCCHHHHCCCH
T ss_pred cCCHHHHHHHHHcCCCCC----------CcCCCCCCHHHHhCCH
Confidence 999999999999999974 3477899999999543
No 93
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=1.4e-22 Score=179.17 Aligned_cols=141 Identities=19% Similarity=0.187 Sum_probs=127.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhc
Q psy2859 40 GMTPLQHAAYKGNKQICQLLLDH-GADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVV 118 (534)
Q Consensus 40 g~TpLh~Aa~~g~~~iv~~Ll~~-ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~ 118 (534)
|.||||+|+..|+.+++++|++. +.+++. .+..|.||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDA-LNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTC-CCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccc-cCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 56899999999999999999998 458998 89999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh-----------CCcccccccchHHHH
Q psy2859 119 VAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL-----------LPSLISHLPSVRKVV 187 (534)
Q Consensus 119 ~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------~p~~~~~~~~~~~~~ 187 (534)
+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++. +|++.+...+..+++
T Consensus 80 ~~~~v~~Ll~~g~~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNV----------PDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLV 149 (156)
T ss_dssp CHHHHHHHHHTTCCSCC----------CCTTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred cHHHHHHHHHcCCCCCC----------cCCCCCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 99999999999999754 367899999999999999999999965 567777777777777
Q ss_pred HHHHH
Q psy2859 188 SLLSE 192 (534)
Q Consensus 188 ~~l~~ 192 (534)
+.|.+
T Consensus 150 ~~Ll~ 154 (156)
T 1bd8_A 150 DILQG 154 (156)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77753
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=1.6e-22 Score=174.98 Aligned_cols=124 Identities=30% Similarity=0.296 Sum_probs=109.8
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++||.|+..|+.+.+..||. .|++++.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 10 g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 87 (137)
T 3c5r_A 10 GETLLHIASIKGDIPSVEYLLQ-NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT-TGYQNDSPLHDAAKNG 87 (137)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCGGGCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-cCCCCCCHHHHHHHcC
Confidence 4467777778888777766665 5999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCC
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEV 131 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~ 131 (534)
+.+++++|+++|++++.+|..|.||||+|+..+..+++.+|.+.+.
T Consensus 88 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 88 HVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999888876543
No 95
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=3.4e-22 Score=187.86 Aligned_cols=129 Identities=23% Similarity=0.322 Sum_probs=110.2
Q ss_pred chhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCchHHHHHHHcC
Q psy2859 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDH-GADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 7 ~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~-ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
.++|+.||..|+.+.|..||. .|+++|.+|..|+||||+|+..|+.++|++|++. |+++|. .|..|+||||+|+..|
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLD-NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ-QNKLGDTALHAAAWKG 151 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC-CCTTSCCHHHHHHHHT
T ss_pred ccccccccccCcHHHHHHHHh-CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc-cCCCCCCHHHHHHHcC
Confidence 468888888888888877776 5999999999999999999999999999999999 999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeecc
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVP 137 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~ 137 (534)
+.++|++|+++|++++.+|..|.||||+|+..+..++++.|+..++.....+
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred CHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 9999999999999999999999999999999999999999999999876653
No 96
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.87 E-value=9.8e-23 Score=186.00 Aligned_cols=128 Identities=14% Similarity=0.194 Sum_probs=112.1
Q ss_pred chhHHHHHHhCCHH---HHHHHHHhCCCCCccCCCCCCcHHHHHHHcCC------HHHHHHHHHCCCCCCCCCCCCCc-h
Q psy2859 7 GNEIFDFISKNDID---NVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGN------KQICQLLLDHGADVNSGRHEHGY-S 76 (534)
Q Consensus 7 ~~~l~~aa~~g~~~---~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~------~~iv~~Ll~~ga~vn~~~~~~G~-T 76 (534)
.++||.|+..|+.+ .+.++|++.|+++|.+|..|+||||+|+..|+ .++|++||++|+++|. +|..|. |
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~-~d~~g~tt 117 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA-LYKPYKIV 117 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS-CBGGGTBC
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc-cCCCcCch
Confidence 45666666666654 47788888899999999999999999999987 6899999999999999 899999 9
Q ss_pred HHHHHHHcC-----CHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceee
Q psy2859 77 ALHFAALSG-----KDDVCACLLS-AGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYI 135 (534)
Q Consensus 77 pLh~A~~~g-----~~~iv~~Ll~-~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~ 135 (534)
|||+|+..+ +.+++++|++ +|++++.+|..|.||||+|+..++.+++++|.....+++.
T Consensus 118 pLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~ 182 (186)
T 3t8k_A 118 VFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNL 182 (186)
T ss_dssp TTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhc
Confidence 999999954 4579999999 9999999999999999999999999999999987655543
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=1.4e-22 Score=190.59 Aligned_cols=126 Identities=21% Similarity=0.172 Sum_probs=114.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHH
Q psy2859 36 YDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSA-GAKSYATNSVGRTASQMA 114 (534)
Q Consensus 36 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~-ga~~~~~~~~G~TpL~~A 114 (534)
.+..|.||||+|+..|+.++|++|++.|+++|. .+..|+||||+|+..|+.++|++|++. |++++.+|..|+||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG-LDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 356789999999999999999999999999998 899999999999999999999999999 999999999999999999
Q ss_pred HHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 115 AFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 115 ~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
+..|+.+++++|++.|++++. .+..|.|||++|+..++.++++.|+..
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~~~----------~~~~g~t~l~~A~~~~~~~~l~~l~~~ 195 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGARTDL----------RNIEKKLAFDMATNAACASLLKKKQGT 195 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCSCC----------CCTTSCCHHHHCCSHHHHHHHC-----
T ss_pred HHcCCHHHHHHHHHcCCCCcc----------ccCCCCCHHHHhcchhHHHHHHHHhcc
Confidence 999999999999999999854 477899999999999999999998876
No 98
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.1e-21 Score=157.58 Aligned_cols=93 Identities=35% Similarity=0.487 Sum_probs=87.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhc
Q psy2859 39 HGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVV 118 (534)
Q Consensus 39 ~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~ 118 (534)
+|+||||+|+..|+.+++++|+++|+++|. .|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 489999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCc
Q psy2859 119 VAVINNYIAKSEVD 132 (534)
Q Consensus 119 ~~~i~~~L~~~~~~ 132 (534)
+.+++++|++.|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999998875
No 99
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=1.1e-21 Score=207.04 Aligned_cols=128 Identities=18% Similarity=0.254 Sum_probs=118.3
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccC------CCCCCcHHHHHHH---cCCHHHHHHHHHCCCCCCCCCCCCCch
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLY------DEHGMTPLQHAAY---KGNKQICQLLLDHGADVNSGRHEHGYS 76 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~------d~~g~TpLh~Aa~---~g~~~iv~~Ll~~ga~vn~~~~~~G~T 76 (534)
+...|+.|+..|+...|..||.. |+++|.. |..|+||||+|+. .|+.++|++||++|+++|. .|..|+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~-~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC-CCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc-cCCCCCc
Confidence 45679999999999999988877 9999987 8899999999976 8999999999999999999 8999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceee
Q psy2859 77 ALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYI 135 (534)
Q Consensus 77 pLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~ 135 (534)
|||+|+..|+.++|++||++|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999753
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=1.5e-22 Score=184.48 Aligned_cols=139 Identities=27% Similarity=0.221 Sum_probs=123.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHH
Q psy2859 37 DEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATN-SVGRTASQMAA 115 (534)
Q Consensus 37 d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~-~~G~TpL~~A~ 115 (534)
+..|.||||+|+..|+.+++++|++ |+++|. .|..|.||||+|+..|+.++|++|+++|++++.++ ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4578999999999999999999999 999999 89999999999999999999999999999999998 89999999999
Q ss_pred HhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhhCCcccccccchHHHHHHHHH
Q psy2859 116 FVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNLLPSLISHLPSVRKVVSLLSE 192 (534)
Q Consensus 116 ~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~p~~~~~~~~~~~~~~~l~~ 192 (534)
..++.+++++|++.|++++. .|..|.||||+|+..++.+.+. .++..+...+..++++.|.+
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~----------~d~~g~tpl~~A~~~~~~~~~~-----~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEV----------EDERGLTALELAREILKTTPKG-----NPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTC----------CCTTSCCHHHHHHHHHHTCCCC-----SHHHHHHHHHHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHcCCCCcC----------CCCCCCCHHHHHHHhccCcccc-----cHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999743 4778999999999877665543 34455666777888888754
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=3.3e-21 Score=187.61 Aligned_cols=124 Identities=16% Similarity=0.235 Sum_probs=115.7
Q ss_pred hhHHHHHHhCCHHHHHHHHHhCCCCCc------cCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCchHH
Q psy2859 8 NEIFDFISKNDIDNVQKLLSEHKLRVD------LYDEHGMTPLQHAAYK---GNKQICQLLLDHGADVNSGRHEHGYSAL 78 (534)
Q Consensus 8 ~~l~~aa~~g~~~~v~~lL~~~g~~~n------~~d~~g~TpLh~Aa~~---g~~~iv~~Ll~~ga~vn~~~~~~G~TpL 78 (534)
.+++.|+..|+...+..++.. |++++ ..|..|+||||+|+.. |+.++|++|+++|+++|. .|..|+|||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-~d~~g~TpL 209 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-QTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-CCTTCCCHH
T ss_pred hhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc-cCCCCCCHH
Confidence 578899999999998887766 88854 4488999999999999 899999999999999999 899999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCce
Q psy2859 79 HFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDY 133 (534)
Q Consensus 79 h~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~ 133 (534)
|+|+..|+.++|++||++|++++.+|..|.||||+|+..|+.+++++|++.|++.
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999999999999874
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=4.1e-21 Score=193.57 Aligned_cols=143 Identities=22% Similarity=0.271 Sum_probs=112.5
Q ss_pred hhHHHHHHh-CCHHHHHHHHHhCCCCCccCC--CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHc
Q psy2859 8 NEIFDFISK-NDIDNVQKLLSEHKLRVDLYD--EHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALS 84 (534)
Q Consensus 8 ~~l~~aa~~-g~~~~v~~lL~~~g~~~n~~d--~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~ 84 (534)
++|+.|+.. |+.+.+..||. .|+++|..+ ..|.||||+|+..|+.++|++||++|+++|. .|..|+||||+|+..
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~-~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALA-HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-ADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHH-TTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHH
T ss_pred cHHHHHHHccCCHHHHHHHHH-cCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHc
Confidence 466666767 77777776665 599999998 8999999999999999999999999999999 899999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHH
Q psy2859 85 GKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIM 159 (534)
Q Consensus 85 g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 159 (534)
|+.++|++||++|++++..|..|.||||+|+..++.+++++|+..+...... ...+..+.|+++++-.
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~-------~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEA-------AQGQAGDETYLDIFRD 346 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------------
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccc-------cccCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999887543211 2223456677765443
No 103
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.84 E-value=3e-21 Score=184.29 Aligned_cols=142 Identities=26% Similarity=0.218 Sum_probs=126.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHH
Q psy2859 37 DEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATN-SVGRTASQMAA 115 (534)
Q Consensus 37 d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~-~~G~TpL~~A~ 115 (534)
+..|.||||+|+..|+.++|++||+ |+++|. .|..|.||||+|+..|+.++|++|+++|++++..+ ..|+||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 3578999999999999999999999 999999 89999999999999999999999999999999998 78999999999
Q ss_pred HhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhhCCcccccccchHHHHHHHHHhhh
Q psy2859 116 FVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNLLPSLISHLPSVRKVVSLLSEKQM 195 (534)
Q Consensus 116 ~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~p~~~~~~~~~~~~~~~l~~~~~ 195 (534)
..|+.+++++|+.+|++++. .+..|.||||+|+..++... ..+|++.+...+...+++.|.+..+
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~----------~d~~g~t~l~~A~~~~~~~~-----~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEV----------EDERGLTALELAREILKTTP-----KGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTC----------CCTTCCCHHHHHHHHHTTCC-----CSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HcCCHHHHHHHHHCCCCCCC----------CCCCCCcHHHHHHHHHhccC-----CCCHHHHHHHcChHHHHHHHHHhcc
Confidence 99999999999999999853 47789999999997544322 1267778888899999999977644
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=3.7e-20 Score=182.20 Aligned_cols=133 Identities=13% Similarity=0.018 Sum_probs=117.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CCCCCchHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCCHHH
Q psy2859 41 MTPLQHAAYKGNKQICQLLLDHGADVNSG-----RHEHGYSALHFAALS---GKDDVCACLLSAGAKSYATNSVGRTASQ 112 (534)
Q Consensus 41 ~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~-----~~~~G~TpLh~A~~~---g~~~iv~~Ll~~ga~~~~~~~~G~TpL~ 112 (534)
.++||.|+..|+++.|+.|++.|++++.. .+..|.||||+|+.. |+.++|++||++|+++|.+|..|+||||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh 231 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHH
Confidence 46799999999999999999999999873 488999999999997 8999999999999999999999999999
Q ss_pred HHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh------CCcccccccch
Q psy2859 113 MAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL------LPSLISHLPSV 183 (534)
Q Consensus 113 ~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------~p~~~~~~~~~ 183 (534)
+|+..|+.+++++|++.|++++. .|..|.||||+|+..++.+++++|++. +|++++...++
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad~~~----------~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRALVGT----------VNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCCSC----------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHHTTSSCCC-------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCChhHHHHhcCC
Confidence 99999999999999999999854 477899999999999999999999977 67777665543
No 105
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.82 E-value=3.8e-22 Score=201.86 Aligned_cols=144 Identities=12% Similarity=-0.032 Sum_probs=101.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC---CCCCCCCCCHHHHH
Q psy2859 41 MTPLQHAAYKGNKQICQLLLDHGADV---NSGRHEHGYSALHFAALSGKDDVCACLLSAGAKS---YATNSVGRTASQMA 114 (534)
Q Consensus 41 ~TpLh~Aa~~g~~~iv~~Ll~~ga~v---n~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~---~~~~~~G~TpL~~A 114 (534)
.||||+|+..|+.++|++|+++|+.. +. .+..|.||||+|+..|+.++|++|+++|+++ +..+.+ .||||+|
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~-~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKV-IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC---CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHH-hccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 48888888888888888888887732 12 3456778888888888888888888888652 322223 7888888
Q ss_pred HHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHH-HhcCchHHHHHHhh-----CCcccccccchHHHHH
Q psy2859 115 AFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFI-MQVNIHPVRVALNL-----LPSLISHLPSVRKVVS 188 (534)
Q Consensus 115 ~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~-~~~~~~~v~~Ll~~-----~p~~~~~~~~~~~~~~ 188 (534)
+..|+.+++++|++.|++++.. ..+..|.||||+|+ ..|+.++|++|++. +|++.+...+..++++
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~--------~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~ 242 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATA--------MIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNP 242 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHH--------HHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHH
T ss_pred HHCCCHHHHHHHHHcCCccchh--------ccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCccchHHHHHHHCCCHHHHH
Confidence 8888888888888888775430 02445778888888 88888888888765 6777777777777777
Q ss_pred HHHHhh
Q psy2859 189 LLSEKQ 194 (534)
Q Consensus 189 ~l~~~~ 194 (534)
+|.+.+
T Consensus 243 lL~~~g 248 (376)
T 2aja_A 243 FIARHV 248 (376)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 776654
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=3.5e-20 Score=186.76 Aligned_cols=124 Identities=23% Similarity=0.154 Sum_probs=116.7
Q ss_pred CCCCcHHHHHHHc-CCHHHHHHHHHCCCCCCCCCC--CCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy2859 38 EHGMTPLQHAAYK-GNKQICQLLLDHGADVNSGRH--EHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMA 114 (534)
Q Consensus 38 ~~g~TpLh~Aa~~-g~~~iv~~Ll~~ga~vn~~~~--~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A 114 (534)
..+.|+||.|+.. |+++++++||++|+++|. .+ ..|.||||+|+..|+.++|++||++|+++|..|..|+||||+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~-~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNW-VNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTC-CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCc-cccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 3456899999999 999999999999999998 66 8999999999999999999999999999999999999999999
Q ss_pred HHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 115 AFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 115 ~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
+..++.+++++|+++|++++. .|..|.||||+|+..++.+++++|+..
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~----------~d~~G~TpL~~A~~~g~~~iv~lLl~~ 323 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGA----------RDSEGRDPLTIAMETANADIVTLLRLA 323 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHCcCCCCC----------cCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 999999999999999999844 477899999999999999999999876
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.3e-20 Score=157.64 Aligned_cols=101 Identities=31% Similarity=0.398 Sum_probs=95.7
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy2859 35 LYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMA 114 (534)
Q Consensus 35 ~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~~A 114 (534)
.+|..|+||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-RSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 4588999999999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHhcHHHHHHHHhhcCCceeec
Q psy2859 115 AFVVVAVINNYIAKSEVDYYIV 136 (534)
Q Consensus 115 ~~~~~~~i~~~L~~~~~~~~~~ 136 (534)
+..+..+++++|++.|++++..
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~ 104 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNAR 104 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHH
T ss_pred HHCCCHHHHHHHHHcCCCCCcC
Confidence 9999999999999999999765
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=3.5e-19 Score=173.22 Aligned_cols=122 Identities=16% Similarity=0.094 Sum_probs=113.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CCCCCchHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCCHHH
Q psy2859 41 MTPLQHAAYKGNKQICQLLLDHGADVNSG-----RHEHGYSALHFAALS---GKDDVCACLLSAGAKSYATNSVGRTASQ 112 (534)
Q Consensus 41 ~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~-----~~~~G~TpLh~A~~~---g~~~iv~~Ll~~ga~~~~~~~~G~TpL~ 112 (534)
.++|+.|+..|+++.++.|+..|++++.. .+..|.||||+|+.. |+.++|++|+++|+++|.+|..|+||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 46899999999999999999999996542 378899999999999 8999999999999999999999999999
Q ss_pred HHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 113 MAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 113 ~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
+|+..|+.+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~----------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEI----------ANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC----------CCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC----------ccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999999999854 477899999999999999999999987
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=2.2e-21 Score=196.29 Aligned_cols=145 Identities=15% Similarity=0.009 Sum_probs=122.3
Q ss_pred hhHHHHHHhCCHHHHHHHHHhCCCC---CccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCchHHHHH
Q psy2859 8 NEIFDFISKNDIDNVQKLLSEHKLR---VDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADV---NSGRHEHGYSALHFA 81 (534)
Q Consensus 8 ~~l~~aa~~g~~~~v~~lL~~~g~~---~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~v---n~~~~~~G~TpLh~A 81 (534)
++|+.||..|+.+.|+.||.. |+. .+..+..|.||||+||..|+.++|++|+++|+++ +. .+.+ .||||+|
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~-ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i-~~~~-~TpLh~A 170 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLL-LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI-QAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC---CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHH-SHHH-HHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc-CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccc-CCCC-CCHHHHH
Confidence 678888888888888777755 652 2234567889999999999999999999999863 32 2223 9999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCC--CCCCCCCHHHHHH-HhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHH
Q psy2859 82 ALSGKDDVCACLLSAGAKSYA--TNSVGRTASQMAA-FVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFI 158 (534)
Q Consensus 82 ~~~g~~~iv~~Ll~~ga~~~~--~~~~G~TpL~~A~-~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 158 (534)
+..|+.++|++|+++|++++. .|..|.||||+|+ ..|+.+++++|++.|++ |.|||+.|+
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-----------------~~taL~~Aa 233 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-----------------LAYAEIHEF 233 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-----------------HHHHHHCTT
T ss_pred HHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-----------------cchHHHHHH
Confidence 999999999999999999887 8889999999999 99999999999986632 789999999
Q ss_pred HhcCchHHHHHHhh
Q psy2859 159 MQVNIHPVRVALNL 172 (534)
Q Consensus 159 ~~~~~~~v~~Ll~~ 172 (534)
..|+.+++++|++.
T Consensus 234 ~~g~~evv~lL~~~ 247 (376)
T 2aja_A 234 EYGEKYVNPFIARH 247 (376)
T ss_dssp TTTTTTHHHHHHHH
T ss_pred HCCCHHHHHHHHhc
Confidence 99999999999986
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=2.1e-19 Score=189.58 Aligned_cols=122 Identities=13% Similarity=0.019 Sum_probs=114.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC------CCCCchHHHHHHH---cCCHHHHHHHHhcCCCCCCCCCCCCCH
Q psy2859 40 GMTPLQHAAYKGNKQICQLLLDHGADVNSGR------HEHGYSALHFAAL---SGKDDVCACLLSAGAKSYATNSVGRTA 110 (534)
Q Consensus 40 g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~------~~~G~TpLh~A~~---~g~~~iv~~Ll~~ga~~~~~~~~G~Tp 110 (534)
..+.||.|+..|++++|+.||+.|+++|. . +..|.||||+|+. .|+.++|++||++|+++|.+|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~-~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQ-PLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSS-CBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccC-CCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 34679999999999999999999999997 5 8899999999966 999999999999999999999999999
Q ss_pred HHHHHHhcHHHHHHHHhhcCCceeeccCCCCCCCCCCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 111 SQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 111 L~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
||+|+..|+.+++++|+++|++++. .|..|.||||+|+..|+.+++++|+++
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~----------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 262 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGT----------VNEAGETALDIARKKHHKECEELLEQA 262 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSC----------CCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 9999999999999999999999854 477899999999999999999999988
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=7e-19 Score=141.04 Aligned_cols=92 Identities=35% Similarity=0.501 Sum_probs=83.6
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++||.|+..|+.+.+..|+. .|+++|.+|..|+||||+|+..|+.+++++|+++|++++. .|..|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~-~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcC
Confidence 4567888888888877766555 5999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCC
Q psy2859 86 KDDVCACLLSAGAK 99 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~ 99 (534)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999985
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=9e-19 Score=145.21 Aligned_cols=93 Identities=27% Similarity=0.335 Sum_probs=85.8
Q ss_pred CccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHH
Q psy2859 33 VDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQ 112 (534)
Q Consensus 33 ~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~G~TpL~ 112 (534)
++..|.+|.||||+|+..|+.+++++|+++|+++|. .|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~-~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAA-KDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 344578899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcHHHHHHHH
Q psy2859 113 MAAFVVVAVINNYI 126 (534)
Q Consensus 113 ~A~~~~~~~i~~~L 126 (534)
+|+..++.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999887
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=2.7e-19 Score=149.48 Aligned_cols=104 Identities=29% Similarity=0.414 Sum_probs=91.4
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
+.++|+.|+..|+.+.+..|| +.|+++|..|..|.||||+|+..|+.+++++|+++|++++. .|..|.||||+|+..|
T Consensus 9 g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 9 GNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-RSKDGNTPEHLAKKNG 86 (115)
T ss_dssp SCCHHHHHHHHTCHHHHHHHT-TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-CCTTCCCTTHHHHTTT
T ss_pred CCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHCC
Confidence 346667777777776665555 55999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHH
Q psy2859 86 KDDVCACLLSAGAKSYATNSVGRTAS 111 (534)
Q Consensus 86 ~~~iv~~Ll~~ga~~~~~~~~G~TpL 111 (534)
+.+++++|+++|+++|.++..|.||-
T Consensus 87 ~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 87 HHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999873
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=5.3e-16 Score=128.37 Aligned_cols=86 Identities=29% Similarity=0.494 Sum_probs=77.7
Q ss_pred CchhHHHHHHhCCHHHHHHHHHhCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCchHHHHHHHcC
Q psy2859 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSG 85 (534)
Q Consensus 6 ~~~~l~~aa~~g~~~~v~~lL~~~g~~~n~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~vn~~~~~~G~TpLh~A~~~g 85 (534)
++++||.|+..|+.+.+..||. .|+++|.+|..|+||||+|+..|+.+++++|+++|++++. .|..|.||||+|+..|
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~-~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~ 101 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMA-NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA-QDKFGKTAFDISIDNG 101 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cccCCCcHHHHHHHcC
Confidence 3466777788888877766665 5999999999999999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHH
Q psy2859 86 KDDVCACL 93 (534)
Q Consensus 86 ~~~iv~~L 93 (534)
+.+++++|
T Consensus 102 ~~~~~~~L 109 (110)
T 2zgd_A 102 NEDLAEIL 109 (110)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 99999987
No 115
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=99.29 E-value=7.3e-12 Score=92.55 Aligned_cols=46 Identities=39% Similarity=0.934 Sum_probs=41.7
Q ss_pred CcccCCCCCCCCcccCCCCCCCccCChhhHHhhHHHhHHhccccCCC
Q psy2859 426 TTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGPS 472 (534)
Q Consensus 426 ~~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~~~~~~ 472 (534)
.+.|..|++. ++++|++|+.++||+++||..||+.||.+|..++..
T Consensus 15 ~~~C~~C~~~-~~~~Cs~Ck~v~YCs~eCQ~~~W~~HK~~C~~~~~~ 60 (70)
T 2d8q_A 15 RPRCAYCSAE-ASKRCSRCQNEWYCCRECQVKHWEKHGKTCVLAAQG 60 (70)
T ss_dssp CCBCSSSCCB-CCCBCTTTSCCBCSCHHHHHHTHHHHHHHCCCCCCC
T ss_pred CCcCCCCCCc-ccccCCCCCCEeeCCHHHhHHHHHHHHHHHHHHHHh
Confidence 4589999996 899999999999999999999999999999976543
No 116
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=99.28 E-value=1.4e-12 Score=95.32 Aligned_cols=60 Identities=28% Similarity=0.632 Sum_probs=41.9
Q ss_pred CCCCCcccccccccccCCCCCCCCCcccCCCCCCCCcccCCCCCCCccCChhhHHhhHHHhHHhccccCCC
Q psy2859 402 DPTPGFALSVLTSAINGHRGFADDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGPS 472 (534)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~~~~~~ 472 (534)
++.+|+.+..+.+ ....|..|++. ++++|++|+.++|||++||..||+.||.+|...+.+
T Consensus 3 ~~~~G~~il~~~~----------~~~~C~~C~~~-~~~~Cs~C~~~~YCs~~CQ~~~W~~Hk~~C~~~~~~ 62 (64)
T 2odd_A 3 LYFQGENLYFQGD----------SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQA 62 (64)
T ss_dssp ------------C----------CSSSCTTTSSC-CCEEETTTSCCEESSHHHHHHHHHHHTTTTTSSCSC
T ss_pred cCCCCCEEeeCCC----------CCCcCccccCC-CcccCCCCCChhhCCHHHHHHHHHHHhHHHhccccC
Confidence 3556666666554 23579999996 899999999999999999999999999999966543
No 117
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=99.19 E-value=1.5e-11 Score=88.42 Aligned_cols=45 Identities=33% Similarity=0.901 Sum_probs=40.9
Q ss_pred CCcccCCCCCCCCcccCCCCCCCccCChhhHHhhHHHhHHhccccC
Q psy2859 425 DTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARSG 470 (534)
Q Consensus 425 ~~~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~~~~ 470 (534)
....|..|++. ++++|++|+.++||+++||..||+.||.+|..++
T Consensus 14 ~~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~~W~~Hk~~C~~~~ 58 (60)
T 2dj8_A 14 SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICSGPS 58 (60)
T ss_dssp CSCCCSSSCSC-CCEECTTTSCCEESSHHHHHHTHHHHTTTSCCSS
T ss_pred CCcccccCCCC-CcccCCCCCCEeeeCHHHHHHHHHHHHHHHHhcc
Confidence 34679999996 8999999999999999999999999999998764
No 118
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=99.18 E-value=1.2e-11 Score=88.83 Aligned_cols=45 Identities=33% Similarity=0.883 Sum_probs=40.9
Q ss_pred CcccCCCCCCCCcccCCCCCCCccCChhhHHhhHHHhHHhccccCC
Q psy2859 426 TTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGP 471 (534)
Q Consensus 426 ~~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~~~~~ 471 (534)
...|..|++. ++++|++|+.++|||++||..||+.||.+|...+.
T Consensus 13 ~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~dW~~Hk~~C~~~~~ 57 (60)
T 2od1_A 13 SESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQ 57 (60)
T ss_dssp SSCCTTTSSC-CCEECTTTSCCEESSHHHHHHHHHHHTTTSSCSSC
T ss_pred CCccccCCCc-ccccCCCCCCeeecCHHHHHHHHHHHhHHHccccc
Confidence 4679999996 89999999999999999999999999999986543
No 119
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=99.06 E-value=4.5e-11 Score=83.52 Aligned_cols=41 Identities=39% Similarity=1.002 Sum_probs=38.0
Q ss_pred cccCCCCCCCCcccCCCCCCCccCChhhHHhhHHHhHHhccc
Q psy2859 427 TPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECAR 468 (534)
Q Consensus 427 ~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~~ 468 (534)
..|..|++. ++++|++|+.++|||++||..||+.||.+|..
T Consensus 10 ~~C~~C~~~-~~~~C~~C~~~~YCs~~CQ~~~W~~Hk~~C~~ 50 (52)
T 2jw6_A 10 QSCVNCGRE-AMSECTGCHKVNYCSTFCQRKDWKDHQHICGQ 50 (52)
T ss_dssp -CCSSSSSS-CSEECTTTCSSEESSHHHHHHHTTTGGGTTTC
T ss_pred CcCCCCCCC-CcCcCCCCCCEeecCHHHHHHHHHHHCHHHcc
Confidence 579999997 89999999999999999999999999999984
No 120
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=98.95 E-value=9.5e-10 Score=81.18 Aligned_cols=48 Identities=40% Similarity=0.923 Sum_probs=42.5
Q ss_pred CCCCCcCCCCCCCCCCCCCCCCCceeeCChhHHHHhhhhhhcccCCCCC
Q psy2859 323 ADDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGP 371 (534)
Q Consensus 323 ~~~~~~C~~c~~~~~~~~c~~c~~~~yc~~~cq~~~~~~h~~~c~~~~~ 371 (534)
.+..+.|..|++. .+++|++|+.++||+++||..||+.||.+|..+..
T Consensus 12 ~~~~~~C~~C~~~-~~~~Cs~Ck~v~YCs~eCQ~~~W~~HK~~C~~~~~ 59 (70)
T 2d8q_A 12 APERPRCAYCSAE-ASKRCSRCQNEWYCCRECQVKHWEKHGKTCVLAAQ 59 (70)
T ss_dssp CCCCCBCSSSCCB-CCCBCTTTSCCBCSCHHHHHHTHHHHHHHCCCCCC
T ss_pred cCCCCcCCCCCCc-ccccCCCCCCEeeCCHHHhHHHHHHHHHHHHHHHH
Confidence 3446789999996 89999999999999999999999999999986544
No 121
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=98.86 E-value=1.9e-09 Score=77.32 Aligned_cols=46 Identities=35% Similarity=0.902 Sum_probs=41.0
Q ss_pred CCCCcCCCCCCCCCCCCCCCCCceeeCChhHHHHhhhhhhcccCCCC
Q psy2859 324 DDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARSG 370 (534)
Q Consensus 324 ~~~~~C~~c~~~~~~~~c~~c~~~~yc~~~cq~~~~~~h~~~c~~~~ 370 (534)
+....|..|++. .+++|++|+.++||+++||..||..||.+|..+.
T Consensus 11 ~~~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~dW~~Hk~~C~~~~ 56 (60)
T 2od1_A 11 DSSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQTL 56 (60)
T ss_dssp CCSSCCTTTSSC-CCEECTTTSCCEESSHHHHHHHHHHHTTTSSCSS
T ss_pred CCCCccccCCCc-ccccCCCCCCeeecCHHHHHHHHHHHhHHHcccc
Confidence 345789999996 8899999999999999999999999999997543
No 122
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.84 E-value=2.4e-09 Score=76.78 Aligned_cols=45 Identities=36% Similarity=0.933 Sum_probs=40.7
Q ss_pred CCCCcCCCCCCCCCCCCCCCCCceeeCChhHHHHhhhhhhcccCCC
Q psy2859 324 DDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARS 369 (534)
Q Consensus 324 ~~~~~C~~c~~~~~~~~c~~c~~~~yc~~~cq~~~~~~h~~~c~~~ 369 (534)
+....|..|++. .+++|++|+.++||+++||..||+.||.+|..+
T Consensus 13 ~~~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~~W~~Hk~~C~~~ 57 (60)
T 2dj8_A 13 DSSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICSGP 57 (60)
T ss_dssp CCSCCCSSSCSC-CCEECTTTSCCEESSHHHHHHTHHHHTTTSCCS
T ss_pred CCCcccccCCCC-CcccCCCCCCEeeeCHHHHHHHHHHHHHHHHhc
Confidence 446789999995 799999999999999999999999999999754
No 123
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.81 E-value=4.1e-11 Score=124.93 Aligned_cols=74 Identities=26% Similarity=0.397 Sum_probs=61.0
Q ss_pred ccCCCCCCCcccccccccccCCCCCCCCCcccCCCCCC-CCcccCCCCCCCccCChhhHHhhHHHhHHhccccCCC
Q psy2859 398 LARSDPTPGFALSVLTSAINGHRGFADDTTPCVTCGEE-NATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGPS 472 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~~~~~~ 472 (534)
+|++++.+|+.+..+.+++.... ......+|..|++. ..+.+|++|++++|||++||..||..||.+|..+...
T Consensus 22 vAtr~i~~Ge~Il~e~P~~~v~~-~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~~ 96 (490)
T 3n71_A 22 KATKEFWAADVIFAERAYSAVVF-DSLINFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKKY 96 (490)
T ss_dssp EESSCBCTTCEEEEECCSEEEEC-GGGTTTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCCCCEEEecCCceEEec-ccccCCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhhhhHHHHHhHHHHhc
Confidence 78999999999999998764422 12335689999985 3578999999999999999999999999999866543
No 124
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=98.80 E-value=3.3e-09 Score=77.32 Aligned_cols=46 Identities=33% Similarity=0.867 Sum_probs=40.9
Q ss_pred CCCcCCCCCCCCCCCCCCCCCceeeCChhHHHHhhhhhhcccCCCCC
Q psy2859 325 DTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGP 371 (534)
Q Consensus 325 ~~~~C~~c~~~~~~~~c~~c~~~~yc~~~cq~~~~~~h~~~c~~~~~ 371 (534)
....|..|++. .++.|++|+.++||+++||..||+.||.+|..+..
T Consensus 16 ~~~~C~~C~~~-~~~~Cs~C~~~~YCs~~CQ~~~W~~Hk~~C~~~~~ 61 (64)
T 2odd_A 16 SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQ 61 (64)
T ss_dssp CSSSCTTTSSC-CCEEETTTSCCEESSHHHHHHHHHHHTTTTTSSCS
T ss_pred CCCcCccccCC-CcccCCCCCChhhCCHHHHHHHHHHHhHHHhcccc
Confidence 35689999996 89999999999999999999999999999985443
No 125
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.79 E-value=9.4e-10 Score=112.79 Aligned_cols=74 Identities=27% Similarity=0.419 Sum_probs=62.3
Q ss_pred ccCCCCCCCcccccccccccCCCCCCCCCcccCCCCCC-CCcccCCCCCCCccCChhhHHhhHHHhHHhccccCCC
Q psy2859 398 LARSDPTPGFALSVLTSAINGHRGFADDTTPCVTCGEE-NATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGPS 472 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~~~~~~ 472 (534)
+|++++.+|+.+..+.|++..+.. ......|..|++. ..+.+|++|++++|||++||+.||..||.+|..+...
T Consensus 22 ~A~r~i~~Ge~Il~e~P~a~~~~~-~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~l~~~ 96 (433)
T 3qww_A 22 RALRPFHVGDLLFSCPAYACVLTV-GERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVL 96 (433)
T ss_dssp EESSCBCTTCEEEEEECSEEEECG-GGTTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHHHHHHTTTHHHHHHS
T ss_pred EECCCCCCCCEEEecCCceEEecc-cccCCcCCcccccCCCCCCCCCCcceeecChhhhhhhhhHHHHHHHHHHHh
Confidence 788999999999999888766432 2335789999986 4679999999999999999999999999999876544
No 126
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.77 E-value=2.2e-09 Score=110.15 Aligned_cols=74 Identities=23% Similarity=0.442 Sum_probs=62.8
Q ss_pred ccCCCCCCCcccccccccccCCCCCCCCCcccCCCCCC-CCcccCCCCCCCccCChhhHHhhHHHhHHhccccCCC
Q psy2859 398 LARSDPTPGFALSVLTSAINGHRGFADDTTPCVTCGEE-NATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGPS 472 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~~~~~~ 472 (534)
+|++++.+|+.+..+.|++.++.. ......|..|++. ..+.+|++|++++|||++||+.||+.||.+|..+...
T Consensus 20 ~Atr~i~~Ge~Il~e~P~~~~~~~-~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~~ 94 (429)
T 3qwp_A 20 RAVTPLRPGELLFRSDPLAYTVCK-GSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPDHKRECKCLKSC 94 (429)
T ss_dssp EESSCBCTTCEEEEECCSEEEECG-GGBTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHTHHHHHHHHHHHHHT
T ss_pred EeCCCCCCCCEEEecCCceeeecc-ccCCCcCcCCCCcCCCCCcCCCCCCcccCChhhhhhhhhhhHHhhhhHHhc
Confidence 789999999999999998887543 2235689999985 4678999999999999999999999999999866543
No 127
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.70 E-value=1e-08 Score=71.41 Aligned_cols=41 Identities=39% Similarity=0.989 Sum_probs=37.3
Q ss_pred CCcCCCCCCCCCCCCCCCCCceeeCChhHHHHhhhhhhcccC
Q psy2859 326 TTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECA 367 (534)
Q Consensus 326 ~~~C~~c~~~~~~~~c~~c~~~~yc~~~cq~~~~~~h~~~c~ 367 (534)
...|..|++. .++.|++|+.+.||+++||..+|+.|+.+|.
T Consensus 9 ~~~C~~C~~~-~~~~C~~C~~~~YCs~~CQ~~~W~~Hk~~C~ 49 (52)
T 2jw6_A 9 EQSCVNCGRE-AMSECTGCHKVNYCSTFCQRKDWKDHQHICG 49 (52)
T ss_dssp --CCSSSSSS-CSEECTTTCSSEESSHHHHHHHTTTGGGTTT
T ss_pred CCcCCCCCCC-CcCcCCCCCCEeecCHHHHHHHHHHHCHHHc
Confidence 4679999996 8999999999999999999999999999997
No 128
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.55 E-value=3.1e-05 Score=79.14 Aligned_cols=46 Identities=37% Similarity=0.821 Sum_probs=40.7
Q ss_pred CCcCCCCCCC-CCCCCCCCCCceeeCChhHHHHhhhhhhcccCCCCC
Q psy2859 326 TTPCVTCGEE-NATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGP 371 (534)
Q Consensus 326 ~~~C~~c~~~-~~~~~c~~c~~~~yc~~~cq~~~~~~h~~~c~~~~~ 371 (534)
...|..|++. ..+..|++|+.++|||++||..+|+.||.+|..+..
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~l~~ 95 (433)
T 3qww_A 49 GHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVV 95 (433)
T ss_dssp TTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHHHHHHTTTHHHHHH
T ss_pred CCcCCcccccCCCCCCCCCCcceeecChhhhhhhhhHHHHHHHHHHH
Confidence 5689999986 368999999999999999999999999999985544
No 129
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.47 E-value=4e-05 Score=78.42 Aligned_cols=46 Identities=28% Similarity=0.751 Sum_probs=40.4
Q ss_pred CCcCCCCCCC-CCCCCCCCCCceeeCChhHHHHhhhhhhcccCCCCC
Q psy2859 326 TTPCVTCGEE-NATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGP 371 (534)
Q Consensus 326 ~~~C~~c~~~-~~~~~c~~c~~~~yc~~~cq~~~~~~h~~~c~~~~~ 371 (534)
...|..|++. ..+..|++|+.+.|||++||+.+|+.||.+|..+..
T Consensus 47 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~ 93 (429)
T 3qwp_A 47 GVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPDHKRECKCLKS 93 (429)
T ss_dssp TTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHTHHHHHHHHHHHHH
T ss_pred CCcCcCCCCcCCCCCcCCCCCCcccCChhhhhhhhhhhHHhhhhHHh
Confidence 5689999985 368899999999999999999999999999985443
No 130
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.33 E-value=7.9e-05 Score=77.44 Aligned_cols=46 Identities=39% Similarity=0.895 Sum_probs=40.1
Q ss_pred CCcCCCCCCC-CCCCCCCCCCceeeCChhHHHHhhhhhhcccCCCCC
Q psy2859 326 TTPCVTCGEE-NATKKCAKCKTTRYCDRECQRLHWFIHKKECARSGP 371 (534)
Q Consensus 326 ~~~C~~c~~~-~~~~~c~~c~~~~yc~~~cq~~~~~~h~~~c~~~~~ 371 (534)
...|..|++. ..+..|++|+.+.|||++||..+|+.||.+|..+..
T Consensus 49 ~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~ 95 (490)
T 3n71_A 49 NFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKK 95 (490)
T ss_dssp TTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhhhhHHHHHhHHHHh
Confidence 5689999885 368899999999999999999999999999975433
No 131
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.83 E-value=0.0016 Score=44.73 Aligned_cols=38 Identities=34% Similarity=0.890 Sum_probs=31.6
Q ss_pred CcccCCCCCCCCcccCCCCCCCccCChhhHHhhHHHhHHhcccc
Q psy2859 426 TTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARS 469 (534)
Q Consensus 426 ~~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~~~ 469 (534)
...|..|+. ....+|.+|... |||-.| |+.||..|...
T Consensus 12 ~~~C~vC~~-~~kY~CPrC~~~-yCSl~C----~k~Hk~~C~~~ 49 (56)
T 2yqq_A 12 TVVCVICLE-KPKYRCPACRVP-YCSVVC----FRKHKEQCNPE 49 (56)
T ss_dssp CCCCTTTCS-CCSEECTTTCCE-ESSHHH----HHHHHHHCCCC
T ss_pred CCccCcCcC-CCeeeCCCCCCC-eeCHHH----HHHHHhhCcCC
Confidence 347999999 688999999965 999999 67788888754
No 132
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=93.97 E-value=0.03 Score=38.67 Aligned_cols=35 Identities=37% Similarity=0.966 Sum_probs=27.8
Q ss_pred cccCCCCC---CCCcccCCCCCCCccCChhhHHhhHHHhHHhcc
Q psy2859 427 TPCVTCGE---ENATKKCAKCKTTRYCDRECQRLHWFIHKKECA 467 (534)
Q Consensus 427 ~~C~~C~~---~~~~~~C~~C~~~~yc~~~cq~~~w~~h~~~C~ 467 (534)
..|..|+. ..+..+|.+|... |||-.|.+ .|+ +|.
T Consensus 12 ~~C~vC~~~~~~~akY~CPrC~~r-YCSl~C~k----~Hk-~Cs 49 (59)
T 1x4s_A 12 GPCGFCPAGEVQPARYTCPRCNAP-YCSLRCYR----THG-TCA 49 (59)
T ss_dssp EEECSSCTTCCEEECEECTTTCCE-ESSHHHHH----HHC-CGG
T ss_pred CcCcCCCCCcCCCccccCcCCCCC-ccChHHHH----HHh-HhC
Confidence 47999995 3467899999965 99999976 465 675
No 133
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.05 E-value=0.18 Score=34.59 Aligned_cols=38 Identities=37% Similarity=0.878 Sum_probs=28.9
Q ss_pred CCCCcCCCCCCCCCCCCCCCCCceeeCChhHHHHhhhhhhcccC
Q psy2859 324 DDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECA 367 (534)
Q Consensus 324 ~~~~~C~~c~~~~~~~~c~~c~~~~yc~~~cq~~~~~~h~~~c~ 367 (534)
....+|..|+. ....+|.+|. +.|||..|-+. |+..|.
T Consensus 10 ~~~~~C~vC~~-~~kY~CPrC~-~~yCSl~C~k~----Hk~~C~ 47 (56)
T 2yqq_A 10 CSTVVCVICLE-KPKYRCPACR-VPYCSVVCFRK----HKEQCN 47 (56)
T ss_dssp CCCCCCTTTCS-CCSEECTTTC-CEESSHHHHHH----HHHHCC
T ss_pred CCCCccCcCcC-CCeeeCCCCC-CCeeCHHHHHH----HHhhCc
Confidence 33457999999 6888999998 66999887655 444475
No 134
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=85.75 E-value=0.3 Score=33.66 Aligned_cols=32 Identities=34% Similarity=0.913 Sum_probs=25.3
Q ss_pred CCcCCCCCC---CCCCCCCCCCCceeeCChhHHHHh
Q psy2859 326 TTPCVTCGE---ENATKKCAKCKTTRYCDRECQRLH 358 (534)
Q Consensus 326 ~~~C~~c~~---~~~~~~c~~c~~~~yc~~~cq~~~ 358 (534)
...|..|+. ..+..+|.+|. +.|||..|.+.|
T Consensus 11 ~~~C~vC~~~~~~~akY~CPrC~-~rYCSl~C~k~H 45 (59)
T 1x4s_A 11 AGPCGFCPAGEVQPARYTCPRCN-APYCSLRCYRTH 45 (59)
T ss_dssp CEEECSSCTTCCEEECEECTTTC-CEESSHHHHHHH
T ss_pred CCcCcCCCCCcCCCccccCcCCC-CCccChHHHHHH
Confidence 357999986 33678999998 669999998854
No 135
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=77.70 E-value=1.9 Score=30.27 Aligned_cols=27 Identities=30% Similarity=0.876 Sum_probs=21.5
Q ss_pred CCcccCCCCCCCCc--ccCCCCCCCccCChh
Q psy2859 425 DTTPCVTCGEENAT--KKCAKCKTTRYCDRE 453 (534)
Q Consensus 425 ~~~~C~~C~~~~~~--~~C~~C~~~~yc~~~ 453 (534)
.+.+|..|++...+ ..| +|... ||++.
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg~~-FC~~H 42 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKC-KCGST-FCGSH 42 (64)
T ss_dssp CSCSCTTTCCCCTTSCEEC-TTSCE-ECSSS
T ss_pred cCCcChhhCCcccccCeEe-ecCCE-ecccC
Confidence 34689999997665 589 99988 89874
No 136
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=77.17 E-value=1.9 Score=31.15 Aligned_cols=26 Identities=31% Similarity=0.961 Sum_probs=21.2
Q ss_pred CcccCCCCCCCCc--ccCCCCCCCccCChh
Q psy2859 426 TTPCVTCGEENAT--KKCAKCKTTRYCDRE 453 (534)
Q Consensus 426 ~~~C~~C~~~~~~--~~C~~C~~~~yc~~~ 453 (534)
+.+|..|.+...+ ..| +|... ||++.
T Consensus 25 ~~RC~~C~kkvgL~~f~C-rCg~~-FCs~H 52 (74)
T 1wfp_A 25 ATRCLSCNKKVGVTGFKC-RCGST-FCGTH 52 (74)
T ss_dssp CCBCSSSCCBCTTTCEEC-TTSCE-ECTTT
T ss_pred CccchhhcCcccccceEe-ccCCE-ecccc
Confidence 4689999998665 689 89988 89874
No 137
>2yqp_A Probable ATP-dependent RNA helicase DDX59; structure genomics, ZF-HIT domain, DEAD box polypeptide 59 isoform 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.34 E-value=5.9 Score=26.78 Aligned_cols=41 Identities=27% Similarity=0.534 Sum_probs=31.9
Q ss_pred CCCCCCCCcccCCCCCCCCcccCCCCCCCccCChhhHHhhHHH
Q psy2859 419 HRGFADDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFI 461 (534)
Q Consensus 419 ~~~~~~~~~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~~w~~ 461 (534)
++++.+..++|..||+- +...|..=-.- .||-+|...+-..
T Consensus 12 Qr~p~pgePvCvvCGry-GeYICd~Td~D-VCSlECK~~~l~~ 52 (60)
T 2yqp_A 12 QRWAEPGEPICVVCGRY-GEYICDKTDED-VCSLECKAKHLLQ 52 (60)
T ss_dssp CCCCCTTSCCCSSSSSC-CSEECSSSCCE-ESSHHHHHHHHHH
T ss_pred hcCCCCCCceEEEecCc-cceeecCCCcc-hhhHHHHHHHHHH
Confidence 35666677899999997 77888776644 7999999887644
No 138
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.32 E-value=2.6 Score=29.86 Aligned_cols=26 Identities=19% Similarity=0.648 Sum_probs=21.6
Q ss_pred CcccCCCCCCCCcc-----cCCCCCCCccCChh
Q psy2859 426 TTPCVTCGEENATK-----KCAKCKTTRYCDRE 453 (534)
Q Consensus 426 ~~~C~~C~~~~~~~-----~C~~C~~~~yc~~~ 453 (534)
..+|..|++...+. .| +|... ||+..
T Consensus 15 ~~rC~~C~kk~gL~~~egf~C-rCg~~-FC~~H 45 (67)
T 1x4w_A 15 RRRCFQCQTKLELVQQELGSC-RCGYV-FCMLH 45 (67)
T ss_dssp TTBCSSSCCBCCHHHHHHHCC-SSSCC-CCTTT
T ss_pred CCcchhhCCeecccccCceEe-cCCCE-ehhcc
Confidence 45899999997764 89 99998 89874
No 139
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=70.33 E-value=3.4 Score=28.93 Aligned_cols=26 Identities=27% Similarity=0.796 Sum_probs=21.0
Q ss_pred CcccCCCCCCCCc--ccCCCCCCCccCChh
Q psy2859 426 TTPCVTCGEENAT--KKCAKCKTTRYCDRE 453 (534)
Q Consensus 426 ~~~C~~C~~~~~~--~~C~~C~~~~yc~~~ 453 (534)
+.+|..|++...+ ..| +|... ||++.
T Consensus 15 ~~rC~~C~kkvgl~~f~C-rCg~~-FC~~H 42 (64)
T 1wfh_A 15 PNRCTVCRKRVGLTGFMC-RCGTT-FCGSH 42 (64)
T ss_dssp CCCCTTTCCCCCTTCEEC-SSSCE-ECTTT
T ss_pred CCcChhhCCccCccCEEe-ecCCE-ecccc
Confidence 4689999997665 589 89988 89874
No 140
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=62.29 E-value=9.6 Score=28.36 Aligned_cols=26 Identities=23% Similarity=0.883 Sum_probs=20.7
Q ss_pred CcccCCCCCCCCc---ccCCCCCCCccCChh
Q psy2859 426 TTPCVTCGEENAT---KKCAKCKTTRYCDRE 453 (534)
Q Consensus 426 ~~~C~~C~~~~~~---~~C~~C~~~~yc~~~ 453 (534)
..+|..|++...+ ..| +|... ||++.
T Consensus 25 ~~rC~~C~kkvgl~~~f~C-rCg~~-FC~~H 53 (85)
T 1wff_A 25 MKHCFLCGKKTGLATSFEC-RCGNN-FCASH 53 (85)
T ss_dssp CCBCSSSCCBCSSSSCEEC-TTCCE-ECTTT
T ss_pred CccchhhCCeecccCCeEc-CCCCE-ecccC
Confidence 4689999998665 589 59988 89874
No 141
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=61.04 E-value=5.1 Score=28.49 Aligned_cols=31 Identities=23% Similarity=0.566 Sum_probs=20.8
Q ss_pred cccCCCCCCCCcccCCCCCCCccCChhhHHhhH
Q psy2859 427 TPCVTCGEENATKKCAKCKTTRYCDRECQRLHW 459 (534)
Q Consensus 427 ~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~~w 459 (534)
..|..|+++..-. ..=....|||+.|+..|-
T Consensus 10 ~~CP~Cgkp~~W~--~~~~~rPFCSeRCr~iDL 40 (68)
T 1lv3_A 10 VNCPTCGKTVVWG--EISPFRPFCSKRCQLIDL 40 (68)
T ss_dssp EECTTTCCEEECS--SSSSCCSSSSHHHHHHHH
T ss_pred CcCCCCCCccccc--ccCCCCcccCHHHHhhhH
Confidence 4699999974311 012245699999999984
No 142
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=46.40 E-value=11 Score=27.14 Aligned_cols=26 Identities=19% Similarity=0.682 Sum_probs=20.4
Q ss_pred CcccCCCCCCCCc--ccCCCCCCCccCChh
Q psy2859 426 TTPCVTCGEENAT--KKCAKCKTTRYCDRE 453 (534)
Q Consensus 426 ~~~C~~C~~~~~~--~~C~~C~~~~yc~~~ 453 (534)
..+|..|++...+ ..|. |... ||+..
T Consensus 25 ~nRC~~CrKkvgL~gf~Cr-Cg~~-FCs~H 52 (74)
T 1wfl_A 25 KNRCFMCRKKVGLTGFDCR-CGNL-FCGLH 52 (74)
T ss_dssp TTBCSSSCCBCGGGCEECT-TSCE-ECSSS
T ss_pred CCcChhhCCcccccCeecC-CCCE-echhc
Confidence 4589999997555 6798 9977 89864
No 143
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=42.38 E-value=13 Score=24.49 Aligned_cols=29 Identities=21% Similarity=0.604 Sum_probs=19.4
Q ss_pred cccCCCCCCCCcccCCCCCCCccCChhhHHh
Q psy2859 427 TPCVTCGEENATKKCAKCKTTRYCDRECQRL 457 (534)
Q Consensus 427 ~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~ 457 (534)
..|..||+...... +=+.-+|||..|.+.
T Consensus 19 ~~C~~CG~~i~~~~--~~r~krFCS~sCR~~ 47 (49)
T 2l8e_A 19 LKCEYCGKYAPAEQ--FRGSKRFCSMTCAKR 47 (49)
T ss_dssp EECTTTCCEEEGGG--CTTTSSSCSHHHHHH
T ss_pred CcChhccCcccccc--CCCCCccCCHHHHhh
Confidence 36999999733222 233457999999865
No 144
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=35.24 E-value=41 Score=23.11 Aligned_cols=22 Identities=18% Similarity=0.557 Sum_probs=18.1
Q ss_pred CcccCCCCCCCCcccCCCCCCC
Q psy2859 426 TTPCVTCGEENATKKCAKCKTT 447 (534)
Q Consensus 426 ~~~C~~C~~~~~~~~C~~C~~~ 447 (534)
...|..|+....+..|..|..+
T Consensus 9 ~~~C~vC~~~g~ll~Cd~C~~~ 30 (61)
T 1mm2_A 9 MEFCRVCKDGGELLCCDTCPSS 30 (61)
T ss_dssp CSSCTTTCCCSSCBCCSSSCCC
T ss_pred CCcCCCCCCCCCEEEcCCCCHH
Confidence 4579999988778899999865
No 145
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.43 E-value=36 Score=22.90 Aligned_cols=24 Identities=17% Similarity=0.516 Sum_probs=18.6
Q ss_pred CCCcccCCCCCCCCcccCCCCCCC
Q psy2859 424 DDTTPCVTCGEENATKKCAKCKTT 447 (534)
Q Consensus 424 ~~~~~C~~C~~~~~~~~C~~C~~~ 447 (534)
.....|..|++...+..|..|...
T Consensus 7 ~~~~~C~vC~~~g~ll~Cd~C~~~ 30 (56)
T 2yql_A 7 GHEDFCSVCRKSGQLLMCDTCSRV 30 (56)
T ss_dssp SSCCSCSSSCCSSCCEECSSSSCE
T ss_pred CCCCCCccCCCCCeEEEcCCCCcc
Confidence 334579999998777889988855
No 146
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=29.84 E-value=32 Score=25.80 Aligned_cols=27 Identities=19% Similarity=0.637 Sum_probs=20.7
Q ss_pred CCcccCCCCCCCCc----ccCCCCCCCccCCh
Q psy2859 425 DTTPCVTCGEENAT----KKCAKCKTTRYCDR 452 (534)
Q Consensus 425 ~~~~C~~C~~~~~~----~~C~~C~~~~yc~~ 452 (534)
....|..|++.+++ ..|..|+.+ +|+.
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~v-fC~~ 38 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRA-FCNG 38 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCE-EETT
T ss_pred cCCCCcCcCCcccCccccccCCCCCCE-EChh
Confidence 34579999998664 469999988 7865
No 147
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=29.56 E-value=51 Score=24.32 Aligned_cols=26 Identities=27% Similarity=0.707 Sum_probs=20.7
Q ss_pred CcccCCCCCCCCc----ccCCCCCCCccCCh
Q psy2859 426 TTPCVTCGEENAT----KKCAKCKTTRYCDR 452 (534)
Q Consensus 426 ~~~C~~C~~~~~~----~~C~~C~~~~yc~~ 452 (534)
...|..|++.+++ ..|..|+.+ +|+.
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v-~C~~ 50 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYV-LCGD 50 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCE-ECTG
T ss_pred CCCCcCcCCccccchhcccccCCCcE-EChH
Confidence 3579999998664 469999998 7976
No 148
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=29.56 E-value=34 Score=26.53 Aligned_cols=22 Identities=32% Similarity=0.770 Sum_probs=16.8
Q ss_pred cccCCCCCCC-----CcccCCCCCCCc
Q psy2859 427 TPCVTCGEEN-----ATKKCAKCKTTR 448 (534)
Q Consensus 427 ~~C~~C~~~~-----~~~~C~~C~~~~ 448 (534)
+.|..||..+ ...+|.+|++-+
T Consensus 68 ~~C~~CG~~F~~~~~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 68 AQCRKCGFVFKAEINIPSRCPKCKSEW 94 (105)
T ss_dssp CBBTTTCCBCCCCSSCCSSCSSSCCCC
T ss_pred cChhhCcCeecccCCCCCCCcCCCCCc
Confidence 4799999765 237899999764
No 149
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=24.55 E-value=39 Score=26.51 Aligned_cols=35 Identities=29% Similarity=0.517 Sum_probs=27.2
Q ss_pred CCcCCCCCCCCCCCCCCCCCceeeCCh---hHHHHhhhh
Q psy2859 326 TTPCVTCGEENATKKCAKCKTTRYCDR---ECQRLHWFI 361 (534)
Q Consensus 326 ~~~C~~c~~~~~~~~c~~c~~~~yc~~---~cq~~~~~~ 361 (534)
...|..|+....+..|..|..+. |++ .+-.+|+.+
T Consensus 24 ~~~C~~C~~~~~~W~CL~CG~vg-Cgr~~~~HA~~H~~~ 61 (109)
T 3c5k_A 24 TQPCGDCGTIQENWVCLSCYQVY-CGRYINGHMLQHHGN 61 (109)
T ss_dssp TCCCTTTCCCSSEEEETTTCCEE-ECTTTTCHHHHHHHH
T ss_pred CCcCccccCCCCeeeeeecCccc-cCCCcChHHHHHhcc
Confidence 45799999987888899999998 975 555555544
No 150
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.46 E-value=31 Score=22.76 Aligned_cols=23 Identities=30% Similarity=0.715 Sum_probs=16.4
Q ss_pred cccCCCCCC------CCcccCCCCCCCcc
Q psy2859 427 TPCVTCGEE------NATKKCAKCKTTRY 449 (534)
Q Consensus 427 ~~C~~C~~~------~~~~~C~~C~~~~y 449 (534)
..|..||.. .....|++|..+.|
T Consensus 20 k~CP~CG~~~fm~~~~~R~~C~kCG~t~~ 48 (50)
T 3j20_Y 20 KFCPRCGPGVFMADHGDRWACGKCGYTEW 48 (50)
T ss_dssp EECSSSCSSCEEEECSSEEECSSSCCEEE
T ss_pred ccCCCCCCceEEecCCCeEECCCCCCEEE
Confidence 469999874 12468999987755
No 151
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=22.31 E-value=36 Score=27.26 Aligned_cols=25 Identities=32% Similarity=0.949 Sum_probs=19.5
Q ss_pred cccCCCCCCCCc----ccCCCCCCCccCCh
Q psy2859 427 TPCVTCGEENAT----KKCAKCKTTRYCDR 452 (534)
Q Consensus 427 ~~C~~C~~~~~~----~~C~~C~~~~yc~~ 452 (534)
..|..|+..+++ ..|..|+.+ +|++
T Consensus 20 ~~C~~C~~~Fs~~~RkHHCR~CG~i-fC~~ 48 (120)
T 1y02_A 20 PSCKSCGAHFANTARKQTCLDCKKN-FCMT 48 (120)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCE-ECGG
T ss_pred CcccCcCCccccccccccCCCCCCe-eCHH
Confidence 479999987654 469999988 7865
No 152
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=22.15 E-value=64 Score=22.62 Aligned_cols=21 Identities=24% Similarity=0.852 Sum_probs=17.8
Q ss_pred cccCCCCCCCCcccCCCCCCC
Q psy2859 427 TPCVTCGEENATKKCAKCKTT 447 (534)
Q Consensus 427 ~~C~~C~~~~~~~~C~~C~~~ 447 (534)
..|..|++...+..|..|..+
T Consensus 13 ~~C~vC~~~~~ll~Cd~C~~~ 33 (66)
T 2lri_C 13 ARCGVCGDGTDVLRCTHCAAA 33 (66)
T ss_dssp CCCTTTSCCTTCEECSSSCCE
T ss_pred CCcCCCCCCCeEEECCCCCCc
Confidence 469999998778899999865
No 153
>3w0f_A Endonuclease 8-like 3; helix two turns helix, zinc finger, DNA binding, hydrolase; 2.00A {Mus musculus}
Probab=21.87 E-value=19 Score=33.72 Aligned_cols=34 Identities=24% Similarity=0.592 Sum_probs=18.5
Q ss_pred ccCCCCCCCCcccCC-CCCCCccCChhhHHhhHHHh
Q psy2859 428 PCVTCGEENATKKCA-KCKTTRYCDRECQRLHWFIH 462 (534)
Q Consensus 428 ~C~~C~~~~~~~~C~-~C~~~~yc~~~cq~~~w~~h 462 (534)
.|..||......+-. .=+..+|| ..||+.+..+|
T Consensus 253 pC~~CGt~I~~~~~g~~gRsTyfC-p~~~~~~~~~~ 287 (287)
T 3w0f_A 253 NCDQCHSKITVCRFGENSRMTYFC-PHCQKHHHHHH 287 (287)
T ss_dssp BCTTTCCBCEEECSSTTCCCEEEC-TTTSCC-----
T ss_pred CCCCCCCEEEEEEecCCCCCEEEC-CCcccccccCC
Confidence 599999763222222 12788899 45887665443
No 154
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=21.23 E-value=1.4e+02 Score=30.28 Aligned_cols=138 Identities=14% Similarity=0.068 Sum_probs=79.3
Q ss_pred HHHhCCHHHHHHHHHh---CCCCCccCCCCCCcHHHHHHHcCC--------------HHHHHHHHHCCCCCCCCCCCCCc
Q psy2859 13 FISKNDIDNVQKLLSE---HKLRVDLYDEHGMTPLQHAAYKGN--------------KQICQLLLDHGADVNSGRHEHGY 75 (534)
Q Consensus 13 aa~~g~~~~v~~lL~~---~g~~~n~~d~~g~TpLh~Aa~~g~--------------~~iv~~Ll~~ga~vn~~~~~~G~ 75 (534)
.+..|+.+....++.+ .|+.+|.. -++.|..|+..+. .++.+.+.+.|..+|. .-+
T Consensus 36 c~k~G~~~~A~~lf~~M~~~Gv~pd~~---tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~----~ty 108 (501)
T 4g26_A 36 CSKKGDVLEALRLYDEARRNGVQLSQY---HYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNE----ATF 108 (501)
T ss_dssp TTTSCCHHHHHHHHHHHHHHTCCCCHH---HHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCH----HHH
T ss_pred HHhCCCHHHHHHHHHHHHHcCCCCCHh---HHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCH----HHH
Confidence 3467888888777743 57766543 3456666654321 3466666778877765 334
Q ss_pred hHH-HHHHHcCCHHHHHHHH----hcCCCCCCCCCCCCCHHHHHH-HhcH----HHHHHHHhhcCCceeeccCCCCCCCC
Q psy2859 76 SAL-HFAALSGKDDVCACLL----SAGAKSYATNSVGRTASQMAA-FVVV----AVINNYIAKSEVDYYIVPRGLETTPK 145 (534)
Q Consensus 76 TpL-h~A~~~g~~~iv~~Ll----~~ga~~~~~~~~G~TpL~~A~-~~~~----~~i~~~L~~~~~~~~~~~~~~~~~~~ 145 (534)
+.| ...+..|+.+-+..|+ +.|..++... +++|..+. ..|. ..+.+.+...|...+..
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t---yn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~--------- 176 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS---YGPALFGFCRKGDADKAYEVDAHMVESEVVPEEP--------- 176 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH---HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHH---------
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce---ehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHH---------
Confidence 444 4557788877554444 4577666543 45555444 3333 33445555566554221
Q ss_pred CCCCCCchHHHHHHhcCchHHHHHHhh
Q psy2859 146 LDPILAEPLHTFIMQVNIHPVRVALNL 172 (534)
Q Consensus 146 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (534)
.-.+.+...+..|+.+-+..+++.
T Consensus 177 ---ty~~Li~~~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 177 ---ELAALLKVSMDTKNADKVYKTLQR 200 (501)
T ss_dssp ---HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ---HHHHHHHHHhhCCCHHHHHHHHHH
Confidence 122344566777888877777654
No 155
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=21.16 E-value=74 Score=24.87 Aligned_cols=34 Identities=29% Similarity=0.626 Sum_probs=25.4
Q ss_pred cccCCCCCCCCcccCCCCCCCccCChhhHHhhHHHh
Q psy2859 427 TPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIH 462 (534)
Q Consensus 427 ~~C~~C~~~~~~~~C~~C~~~~yc~~~cq~~~w~~h 462 (534)
..|..|+....+-.|..|..+. |++. +..|-..|
T Consensus 25 ~~C~~C~~~~~~W~CL~CG~vg-Cgr~-~~~HA~~H 58 (109)
T 3c5k_A 25 QPCGDCGTIQENWVCLSCYQVY-CGRY-INGHMLQH 58 (109)
T ss_dssp CCCTTTCCCSSEEEETTTCCEE-ECTT-TTCHHHHH
T ss_pred CcCccccCCCCeeeeeecCccc-cCCC-cChHHHHH
Confidence 4699999987888899999995 9865 33333344
Done!