RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2859
(534 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 81.9 bits (201), Expect = 2e-17
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 41 MTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKS 100
+TPL A++ G+ I + LL GA N + + LH AA +G +V LL AK
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQRGASPNV-SNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59
Query: 101 YATNSVGRTASQMAA 115
A +T AA
Sbjct: 60 NAKAKDDQTPLHCAA 74
Score = 77.7 bits (190), Expect = 6e-16
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 15 SKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHG 74
+ V+ LL + ++ + TPL AA G+ ++ + LL + A VN+ + +
Sbjct: 9 FMGHLPIVKNLL-QRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA-KAKDD 66
Query: 75 YSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMA 114
+ LH AA G ++ LL A + G T +A
Sbjct: 67 QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIA 106
Score = 68.1 bits (165), Expect = 8e-13
Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 32/141 (22%)
Query: 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADV 66
G ++ + LL + +L ++ G+TPL A +G+ + +L+ HG V
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290
Query: 67 NSG--------------------------------RHEHGYSALHFAALSGKDDVCACLL 94
++ + + GYS LH AA G D+ LL
Sbjct: 291 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 350
Query: 95 SAGAKSYATNSVGRTASQMAA 115
GA +S G T +A
Sbjct: 351 KNGASPNEVSSDGTTPLAIAK 371
Score = 65.4 bits (158), Expect = 5e-12
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADV 66
G +K V +LL E + ++G+TPL A + N I +LLL G
Sbjct: 132 GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP 191
Query: 67 NSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAA 115
+S +GY+ LH AA + +V LL G + A + G T +AA
Sbjct: 192 HS-PAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA 239
Score = 64.2 bits (155), Expect = 1e-11
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 24 KLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAAL 83
K L +H+ V+ + G +PL AA +G+ I LLL +GA N G + L A
Sbjct: 314 KFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE-VSSDGTTPLAIAKR 372
Query: 84 SGKDDVCACL 93
G V L
Sbjct: 373 LGYISVTDVL 382
Score = 62.7 bits (151), Expect = 4e-11
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 28 EHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKD 87
E + + G TPL AA G ++ +LLL+ A N+ ++G + LH A
Sbjct: 120 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA-AGKNGLTPLHVAVHHNNL 178
Query: 88 DVCACLLSAGAKSYATNSVGRTA 110
D+ LL G ++ G T
Sbjct: 179 DIVKLLLPRGGSPHSPAWNGYTP 201
Score = 49.6 bits (117), Expect = 5e-07
Identities = 39/162 (24%), Positives = 58/162 (35%), Gaps = 11/162 (6%)
Query: 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGAD 65
G ++ ++ KLL +G TPL AA + ++ + LL +G
Sbjct: 164 NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS 223
Query: 66 VNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNY 125
N+ G + LH AA G ++ A LLS A N G T + A + +
Sbjct: 224 ANA-ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADV 282
Query: 126 IAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVR 167
+ K V R T PLH NI V+
Sbjct: 283 LIKHGVMVDATTRMGYT----------PLHVASHYGNIKLVK 314
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 72.3 bits (176), Expect = 1e-14
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDH-G 63
+D++ + LL +H V++ E G TPL A K + + Q LL+
Sbjct: 184 NALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH 243
Query: 64 ADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSV 106
++N G +AL A + L GA + + V
Sbjct: 244 IEIND-TDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285
Score = 61.1 bits (147), Expect = 6e-11
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 14 ISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGN----KQICQLLLDHGADVNSG 69
K ++ ++ LL E V+ D G L HA + + I LLLDHGADVN
Sbjct: 156 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV- 214
Query: 70 RHEHGYSALHFAALSGKDDVCACLLS-AGAKSYATNSVGRTASQMAA 115
R E G + L A + LL + T+S G+TA +A
Sbjct: 215 RGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV 261
Score = 59.6 bits (143), Expect = 2e-10
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 40 GMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAK 99
L A + + Q LL+ GA+VN E G++ LH A ++D+ LL GA
Sbjct: 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64
Query: 100 SYATNSVGRTASQMAAF 116
G T +AA
Sbjct: 65 PVLRKKNGATPFLLAAI 81
Score = 54.2 bits (129), Expect = 1e-08
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 29 HKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDH-GADVNSGRHEHGYSALHFAALSGK- 86
K + + G T L AA KG+ ++ ++LLD GADVN+ + + +H S
Sbjct: 137 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196
Query: 87 --DDVCACLLSAGAKSYATNSVGRTASQMA 114
+ + LL GA G+T +A
Sbjct: 197 DVEAITHLLLDHGADVNVRGERGKTPLILA 226
Score = 52.7 bits (125), Expect = 4e-08
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 5 MEGNE-IFDFISKNDIDNVQKLLSEHKLRVDLYD-EHGMTPLQHAAYKGNKQICQLLLDH 62
+E N + + D+D VQ+LL E V+ + E G TPL +A + I +LLL H
Sbjct: 3 VEDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61
Query: 63 GADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVI 122
GAD + AA++G + LS GA + G TA AA
Sbjct: 62 GADPVLRKKNGATPF-LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120
Query: 123 NNYIAKSEVDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALN 171
++ K + + + E +L A L + ++ +++ L+
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 169
>d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing
protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 47
Score = 63.1 bits (153), Expect = 1e-13
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 323 ADDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKEC 366
D + C CG + A++ C+ C T RYC CQ W H C
Sbjct: 5 EDSSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHIC 47
Score = 63.1 bits (153), Expect = 1e-13
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 423 ADDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKEC 466
D + C CG + A++ C+ C T RYC CQ W H C
Sbjct: 5 EDSSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHIC 47
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 67.8 bits (164), Expect = 4e-13
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 16 KNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGY 75
+ + + ++ L+ + + + G T L AA KG ++ +LL+ DVN + G+
Sbjct: 175 RIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI-KDYDGW 233
Query: 76 SALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEV 131
+ LH AA GK++ C L+ A N VG+TA +A ++ + K +
Sbjct: 234 TPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNL 289
Score = 59.0 bits (141), Expect = 4e-10
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 10 IFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSG 69
+ +K + ++ L + + V++ D G TPL AA+ G ++ C++L+++ D+ +
Sbjct: 203 LHVAAAKGYTEVLKLL-IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA- 260
Query: 70 RHEHGYSALHFAALSGKDDVCACLLSAGAK 99
++ G +A A +D+ L K
Sbjct: 261 VNKVGQTAFDVAD----EDILGYLEELQKK 286
Score = 51.3 bits (121), Expect = 1e-07
Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 8 NEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVN 67
NE ++ D ++ K +V A G+ + LL+ GAD+N
Sbjct: 11 NEQLKRWIGSETDLEPPVVKRKKTKVKF---DDGAVFLAACSSGDTEEVLRLLERGADIN 67
Query: 68 SGRHEHGYSALHFAALSGKDDVCAC 92
+ G +ALH A + D+
Sbjct: 68 Y-ANVDGLTALHQACIDDNVDMVKF 91
Score = 38.5 bits (88), Expect = 0.001
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 15 SKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHG 74
S D + V +LL E ++ + G+T L A N + + L+++G + G
Sbjct: 49 SSGDTEEVLRLL-ERGADINYANVDGLTALHQACIDDNVDMVKFLVENG-ANINQPDNEG 106
Query: 75 YSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAA 115
+ LH AA G D+ L+S GA A NS G T +A
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAE 147
Score = 34.7 bits (78), Expect = 0.023
Identities = 12/46 (26%), Positives = 14/46 (30%)
Query: 71 HEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAF 116
+ A SG + LL GA N G TA A
Sbjct: 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACI 82
Score = 29.7 bits (65), Expect = 0.80
Identities = 16/71 (22%), Positives = 26/71 (36%)
Query: 46 HAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNS 105
+ + + L+ G + + G +ALH AA G +V L+ A +
Sbjct: 171 KEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230
Query: 106 VGRTASQMAAF 116
G T AA
Sbjct: 231 DGWTPLHAAAH 241
>d2dana1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing
protein 10, ZMYND10 {Human (Homo sapiens) [TaxId: 9606]}
Length = 47
Score = 61.6 bits (149), Expect = 4e-13
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 320 RGFADDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKEC 366
A + C C E A+K+C++C+ YC RECQ HW H K C
Sbjct: 2 EAVAPERPRCAYCSAE-ASKRCSRCQNEWYCCRECQVKHWEKHGKTC 47
Score = 61.6 bits (149), Expect = 4e-13
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 420 RGFADDTTPCVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKEC 466
A + C C E A+K+C++C+ YC RECQ HW H K C
Sbjct: 2 EAVAPERPRCAYCSAE-ASKRCSRCQNEWYCCRECQVKHWEKHGKTC 47
>d2jw6a1 g.85.1.1 (A:503-540) Zinc finger MYND domain-containing
protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 60.7 bits (147), Expect = 5e-13
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 329 CVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKEC 366
CV CG E A +C C YC CQR W H+ C
Sbjct: 2 CVNCGRE-AMSECTGCHKVNYCSTFCQRKDWKDHQHIC 38
Score = 60.7 bits (147), Expect = 5e-13
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 429 CVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKEC 466
CV CG E A +C C YC CQR W H+ C
Sbjct: 2 CVNCGRE-AMSECTGCHKVNYCSTFCQRKDWKDHQHIC 38
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 66.8 bits (162), Expect = 1e-12
Identities = 20/119 (16%), Positives = 32/119 (26%), Gaps = 17/119 (14%)
Query: 14 ISKNDIDNVQKLLSEHKLRVDLYDEH-----------GMTPLQHAAYKGNK---QICQLL 59
+++ V++LL + + + AA G LL
Sbjct: 53 PGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLL 112
Query: 60 LDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATN--SVGRTASQMAAF 116
L V Y A AA +G V L + A ++AA
Sbjct: 113 LTSDEIVKV-IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAE 170
Score = 61.1 bits (147), Expect = 1e-10
Identities = 14/83 (16%), Positives = 21/83 (25%), Gaps = 1/83 (1%)
Query: 18 DIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSG-RHEHGYS 76
+ LL V + + AA G+ + L + Y
Sbjct: 104 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYH 163
Query: 77 ALHFAALSGKDDVCACLLSAGAK 99
A AA +G V L
Sbjct: 164 AFRLAAENGHLHVLNRLCELAPT 186
Score = 48.3 bits (114), Expect = 1e-06
Identities = 12/67 (17%), Positives = 16/67 (23%), Gaps = 4/67 (5%)
Query: 33 VDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEH----GYSALHFAALSGKDD 88
L + + L + + LL L A G
Sbjct: 272 ECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQG 331
Query: 89 VCACLLS 95
CA LLS
Sbjct: 332 ACALLLS 338
Score = 42.6 bits (99), Expect = 7e-05
Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Query: 16 KNDIDNVQKLLSEH-KLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSG--RHE 72
+ + +L + + + AA G+ + L + + + E
Sbjct: 136 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAE 195
Query: 73 HGYSALHFAALSGKDDVCACLLSAG 97
+ Y+ A G +V LL
Sbjct: 196 NYYAFRWAAVGRGHHNVINFLLDCP 220
Score = 40.3 bits (93), Expect = 5e-04
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 15 SKNDIDNVQKLLSEHKLRVDLYDEH----GMTPLQHAAYKGNKQICQLLLDHG 63
+ +D+++ LLS ++ L+ A GN+ C LLL
Sbjct: 288 DEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP 340
Score = 37.9 bits (87), Expect = 0.002
Identities = 16/115 (13%), Positives = 30/115 (26%), Gaps = 15/115 (13%)
Query: 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLY---DEHGMTPLQHAAYKGNKQICQLLLD 61
E F ++N +V L E E+ A +G+ + LLD
Sbjct: 159 AENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD 218
Query: 62 HGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAF 116
+ A G+ V + + A +++
Sbjct: 219 CPVMLA--------YAEIHEFEYGEKYVNPFIARHVNR----LKEMHDAFKLSNP 261
Score = 36.4 bits (83), Expect = 0.007
Identities = 13/138 (9%), Positives = 22/138 (15%), Gaps = 34/138 (24%)
Query: 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGA 64
NV L + + + H G K + + H
Sbjct: 195 ENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPFIARHVN 247
Query: 65 DVNSGRH----------------------EHGYSALHFAALSGKDDVCACLLSAGAKSY- 101
+ + L D LLS
Sbjct: 248 RLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKAL 307
Query: 102 ----ATNSVGRTASQMAA 115
++A
Sbjct: 308 APTATIPGDANELLRLAL 325
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 63.6 bits (153), Expect = 7e-12
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Query: 10 IFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSG 69
+ +++ V+ L+ E D DE G TP+ AA +G ++ L+ GA V +
Sbjct: 191 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA- 249
Query: 70 RHEHGYSALHFAALSGKDDVCACLL 94
++A A + ++
Sbjct: 250 VDATDHTARQLAQANNHHNIVDIFD 274
Score = 58.2 bits (139), Expect = 5e-10
Identities = 26/111 (23%), Positives = 43/111 (38%)
Query: 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGA 64
+K ++ K+ + R D G T L +AA N I + L+
Sbjct: 152 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG 211
Query: 65 DVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAA 115
+ E G + + AA G+ +V L+ GA A ++ TA Q+A
Sbjct: 212 SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQ 262
Score = 52.4 bits (124), Expect = 4e-08
Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
Query: 42 TPLQ-HAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLL------ 94
+P++ H G+ I + + ++ RH + LH+ A + + L+
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRH--NRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 95 --SAGAKSYATNSVGRTASQM 113
+AGA A + T +
Sbjct: 60 CIAAGADVNAMDCDENTPLML 80
Score = 44.0 bits (102), Expect = 2e-05
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 10/75 (13%)
Query: 14 ISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDH--------GAD 65
+ + ++ + + + H T L A + + + L+ H GAD
Sbjct: 8 TEAAGSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD 66
Query: 66 VNSGRHEHGYSALHF 80
VN+ + L
Sbjct: 67 VNA-MDCDENTPLML 80
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 63.9 bits (154), Expect = 9e-12
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 25 LLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAA 82
L ++ D +G T L AA GN I LLD+GAD ++ G + F A
Sbjct: 244 LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFI-ANKSGLRPVDFGA 300
Score = 60.1 bits (144), Expect = 2e-10
Identities = 19/112 (16%), Positives = 35/112 (31%), Gaps = 3/112 (2%)
Query: 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADV 66
G +K +D + + + + R + + K LD +
Sbjct: 189 GMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII 248
Query: 67 NSG---RHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAA 115
+ + +G + L+ AA G + LL GA + N G A
Sbjct: 249 ANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 52.4 bits (124), Expect = 5e-08
Identities = 14/102 (13%), Positives = 37/102 (36%), Gaps = 1/102 (0%)
Query: 14 ISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGN-KQICQLLLDHGADVNSGRHE 72
+ +I + L+ + QH ++ +++ + ++N E
Sbjct: 46 LLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDE 105
Query: 73 HGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMA 114
HG + LH+ ++ L+ G+ +++G + A
Sbjct: 106 HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA 147
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 61.6 bits (148), Expect = 3e-11
Identities = 27/141 (19%), Positives = 42/141 (29%), Gaps = 2/141 (1%)
Query: 37 DEHGMTPLQHAAYKGNKQICQLLLDHGADVNS--GRHEHGYSALHFAALSGKDDVCACLL 94
E G T L A ++ LL A +++ G +ALH AA+ G+ L
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 95 SAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSEVDYYIVPRGLETTPKLDPILAEPL 154
+AGA G TA +A V + + + T D
Sbjct: 66 AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125
Query: 155 HTFIMQVNIHPVRVALNLLPS 175
+ +P
Sbjct: 126 APAAVDSQPNPENEEEPRDED 146
Score = 61.3 bits (147), Expect = 3e-11
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 36 YDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLS 95
G TPL A + +LLL GAD + R G + L A L + L +
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTA-RMYGGRTPLGSALLRPNPILARLLRA 246
Query: 96 AGAK 99
GA
Sbjct: 247 HGAP 250
Score = 52.0 bits (123), Expect = 4e-08
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 8 NEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVN 67
+ + ++ LL + G TPL A + N + +LL HGA
Sbjct: 194 TPLHLAVEAQAASVLELLL-KAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252
Score = 43.2 bits (100), Expect = 4e-05
Identities = 29/102 (28%), Positives = 44/102 (43%)
Query: 15 SKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHG 74
N + + + +L+++ + G TPL A + ++ +LL D GAD+N G
Sbjct: 133 QPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCG 192
Query: 75 YSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAF 116
+ LH A + V LL AGA A GRT A
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234
Score = 42.4 bits (98), Expect = 6e-05
Identities = 18/88 (20%), Positives = 25/88 (28%), Gaps = 3/88 (3%)
Query: 14 ISKNDIDNVQKLLSE--HKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRH 71
+ + LL +DL ++ G T L AA G + L GA V
Sbjct: 17 VIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER 76
Query: 72 EHGYSALHFAALSGKDDVCACLLSAGAK 99
+ H A LL
Sbjct: 77 GGHTAL-HLACRVRAHTCACVLLQPRPS 103
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 60.4 bits (145), Expect = 6e-11
Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 34/134 (25%)
Query: 10 IFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKG------------------ 51
+ + ++ +++ + K D+ T L A G
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 52 ---------------NKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSA 96
+I + LL GA VN+ +++G + LH+AA + ++ LL
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNA-VNQNGCTPLHYAASKNRHEIAVMLLEG 125
Query: 97 GAKSYATNSVGRTA 110
GA A + TA
Sbjct: 126 GANPDAKDHYEATA 139
Score = 57.3 bits (137), Expect = 5e-10
Identities = 30/148 (20%), Positives = 53/148 (35%), Gaps = 34/148 (22%)
Query: 1 MSIPMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLL 60
G + D + K L +V+ +++G TPL +AA K +I +LL
Sbjct: 64 NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 123
Query: 61 DHGADVNSGRHEHGYSALHFAALS---------------------------------GKD 87
+ GA+ ++ + + +A+H AA +
Sbjct: 124 EGGANPDA-KDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERV 182
Query: 88 DVCACLLSAGAKSYATNSVGRTASQMAA 115
+ L+S GA Y N +T Q+A
Sbjct: 183 EEAKLLVSQGASIYIENKEEKTPLQVAK 210
Score = 55.4 bits (132), Expect = 2e-09
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGAD 65
+ + +L +K ++ D G TPL A + + +LL+ GA
Sbjct: 135 YEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGAS 194
Query: 66 VNSGRHEHGYSALHFAALSGKDDVCACLL 94
+ ++ + L A G + ++
Sbjct: 195 IYI-ENKEEKTPLQVAK-GGLGLILKRMV 221
Score = 38.0 bits (87), Expect = 0.001
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 6 EGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLD 61
EGN + KLL + + ++ TPL A G I + +++
Sbjct: 168 EGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPL-QVAKGGLGLILKRMVE 222
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 58.3 bits (139), Expect = 3e-10
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 1 MSIPMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLL 60
G +N+ ++ +LL +H V+ G + L A+ +G + + L+
Sbjct: 138 AVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLV 197
Query: 61 DHGADVNSGRHEHGYSALHFAALSGKDDV 89
GAD + ++ H + L A D+
Sbjct: 198 RSGADSSL-KNCHNDTPLMVARSRRVIDI 225
Score = 47.9 bits (112), Expect = 8e-07
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 38 EHGMTPLQHAAYKGNKQICQLLLD----HGADVNSGRHEHGYSALHFAALSGKDDVCAC 92
E G TPL A +GN L++ G +++ + + LH A ++ V
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDI-YNNLRQTPLHLAVITTLPSVVRL 58
Score = 46.8 bits (109), Expect = 2e-06
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 8 NEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVN 67
+ ++ + VQ LL + + G +PL HA + + QLLL HG
Sbjct: 112 TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG-ANV 170
Query: 68 SGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAA 115
+ + G SALH A+ G + L+ +GA S N T +A
Sbjct: 171 NAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 218
Score = 35.6 bits (80), Expect = 0.009
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 72 EHGYSALHFAALSGKDDVCACLLS----AGAKSYATNSVGRTASQMA 114
E G + LH A + G L++ G + N++ +T +A
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA 47
Score = 32.9 bits (73), Expect = 0.064
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Query: 14 ISKNDIDNVQKLLS---EHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGR 70
+ + ++ V +L++ + +D+Y+ TPL H A LL
Sbjct: 11 VVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPL-HLAVITTLPSVVRLLVTAGASPMAL 69
Query: 71 HEHGYSALHFAALSGKDDVCACLLSAGAKSY 101
HG +A H A LL + A
Sbjct: 70 DRHGQTAAHLACEHRSPTCLRALLDSAAPGT 100
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 50.0 bits (118), Expect = 6e-08
Identities = 15/137 (10%), Positives = 38/137 (27%), Gaps = 40/137 (29%)
Query: 8 NEIFDFISKNDIDNVQKLLSE-----HKLRVDLYDEHGMTPLQHAAY---KGNKQICQLL 59
+ + + + DI + + ++ K+ + E T L A + + I L
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 60 LDHGADVNSGRH--------------------------------EHGYSALHFAALSGKD 87
+ + +++ E G + L A +
Sbjct: 68 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127
Query: 88 DVCACLLSAGAKSYATN 104
L A + + ++
Sbjct: 128 HCEELLTQALSGRFNSH 144
Score = 42.3 bits (98), Expect = 3e-05
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 34 DLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEH 73
++ +E G TPL A ++ +LL + + H H
Sbjct: 108 EIANESGETPLDIAKRLKHEHCEELLTQALSGRFN-SHVH 146
Score = 35.0 bits (79), Expect = 0.007
Identities = 12/66 (18%), Positives = 19/66 (28%), Gaps = 8/66 (12%)
Query: 41 MTPLQHAAYKGNKQICQLLLDHGADVN-----SGRHEHGYSALHFAALSGKD---DVCAC 92
+ L A + G D+ + HE +ALH A S +
Sbjct: 7 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDF 66
Query: 93 LLSAGA 98
L+
Sbjct: 67 LVQNSG 72
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 49.8 bits (117), Expect = 1e-07
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 53 KQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACL 93
Q+ LL GA++N+ + G ++LH AA + D L
Sbjct: 2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
Score = 49.4 bits (116), Expect = 2e-07
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 34 DLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACL 93
D D+ TPL AA +G+ + + LLD+ A+ A+ D+ L
Sbjct: 150 DAQDDKDETPLFLAAREGSYEASKALLDNFANREI-TDHMDRLPRDVASERLHHDIVRLL 208
Score = 45.2 bits (105), Expect = 5e-06
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 1/115 (0%)
Query: 1 MSIPMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLL 60
+ +G ++ I+ + + L ++ D G T L AA N + +LL
Sbjct: 84 NARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILL 143
Query: 61 DHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAA 115
H A+ ++ + + + L AA G + LL A T+ + R +A+
Sbjct: 144 MHHANRDA-QDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVAS 197
Score = 42.1 bits (97), Expect = 6e-05
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 22 VQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLL 59
K L ++ ++ D P A+ + + I +LL
Sbjct: 171 ASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 34.0 bits (76), Expect = 0.027
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 22 VQKLLSEHKLRVDL-YDEHGMTPLQHAAYKGNKQICQLLLDH 62
+ LL ++ D+ G T L AA + LLD
Sbjct: 5 ISDLL-AQGAELNATMDKTGETSLHLAARFARADAAKRLLDA 45
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory
subunit 10, gankyrin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 229
Score = 50.2 bits (118), Expect = 1e-07
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 42 TPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAG 97
PL A + Q LL + + + G LH++ ++ + LLS
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57
Score = 48.3 bits (113), Expect = 6e-07
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 10 IFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGAD 65
+F +++ D L+ ++ DL D G A N+Q+ + L++ D
Sbjct: 176 LFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228
Score = 47.9 bits (112), Expect = 8e-07
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 37 DEHGMTPLQHAAYKGNKQICQLLLD-HGADVNSGRHEHGYSALHFAALSGKDDVCACLLS 95
D+ G TPL HA +G+ LL++ +GA+ + G A A + V L+
Sbjct: 169 DKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL-VDNKGAKAEDVAL---NEQVKKFFLN 224
Query: 96 AGA 98
Sbjct: 225 NVV 227
Score = 45.6 bits (106), Expect = 5e-06
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Query: 1 MSIPMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLL 60
I +G V + L E+ V + D+ PL AA G+ ++ +LL
Sbjct: 99 NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 158
Query: 61 DHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSA-GAKSYATNSVGRTASQMAA 115
G + + + G++ L A G D L+ GA+ ++ G A +A
Sbjct: 159 GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 214
Score = 43.3 bits (100), Expect = 3e-05
Identities = 14/62 (22%), Positives = 23/62 (37%)
Query: 14 ISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEH 73
+N+ VQ+LL + D+ G PL + +I LL +VN +
Sbjct: 8 CMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPD 67
Query: 74 GY 75
Sbjct: 68 DS 69
Score = 33.3 bits (74), Expect = 0.055
Identities = 8/40 (20%), Positives = 13/40 (32%), Gaps = 1/40 (2%)
Query: 77 ALHFAALSGKDDVCACLL-SAGAKSYATNSVGRTASQMAA 115
LH A + + LL S + + GR +
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSV 42
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 47.6 bits (111), Expect = 9e-07
Identities = 20/83 (24%), Positives = 27/83 (32%), Gaps = 1/83 (1%)
Query: 17 NDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYS 76
+ V+ L+S +G T L A N + LLL GADVN GYS
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR-VTYQGYS 180
Query: 77 ALHFAALSGKDDVCACLLSAGAK 99
+ L +
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLE 203
Score = 43.0 bits (99), Expect = 3e-05
Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 40 GMTPLQHAAYKGN----KQICQLLLDHGADVNSGRHEHGYSALHFA 81
G + L A ++ + + A +N ++ + LH A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNF-QNNLQQTPLHLA 46
Score = 40.6 bits (93), Expect = 2e-04
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 36 YDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACLLS 95
+ +G T L A+ G I +LL+ GADVN+ +G +ALH A D+ + LL
Sbjct: 107 TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK 166
Query: 96 AGAKSYATNSVGRTASQMAA 115
GA G + Q+
Sbjct: 167 CGADVNRVTYQGYSPYQLTW 186
Score = 33.3 bits (74), Expect = 0.048
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Query: 74 GYSALHFAALSGKDDVCA----CLLSAGAKSYATNSVGRTASQMA 114
G S LH A + + + + A N++ +T +A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46
Score = 26.4 bits (56), Expect = 7.7
Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 7/161 (4%)
Query: 14 ISKNDIDNVQ---KLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGR 70
I + + + ++ + TPL H A N+ L R
Sbjct: 10 IIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPL-HLAVITNQPEIAEALLGAGCDPELR 68
Query: 71 HEHGYSALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQMAAFVVVAVINNYIAKSE 130
G + LH A G L + + + + T + +A I+ Y+
Sbjct: 69 DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL---G 125
Query: 131 VDYYIVPRGLETTPKLDPILAEPLHTFIMQVNIHPVRVALN 171
+ +V G + + LH + N V + L
Sbjct: 126 IVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK 166
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 44.7 bits (104), Expect = 3e-06
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 36 YDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSA--LHFAALSGKDDVCACL 93
D G TPL AA N Q+C+ L++ GA V + + +A G L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 94 LSAGAK 99
K
Sbjct: 123 YGVQEK 128
Score = 35.8 bits (81), Expect = 0.003
Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 33/108 (30%)
Query: 41 MTPLQHAAYKGNKQICQLLLDHGADVNSGRHE---------------------------- 72
+ L ++ +G + Q ++ D + E
Sbjct: 2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61
Query: 73 ----HGYSALHFAALSGKDDVCACLLSAGAKSYA-TNSVGRTASQMAA 115
G++ LH AA VC L+ +GA +A T S +TA+
Sbjct: 62 AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCE 109
Score = 33.5 bits (75), Expect = 0.020
Identities = 11/69 (15%), Positives = 17/69 (24%), Gaps = 3/69 (4%)
Query: 1 MSIPMEGNEIFDFISKNDIDNVQKLLSEHKLRV---DLYDEHGMTPLQHAAYKGNKQICQ 57
+ +G + + V K L E V D +G Q Q
Sbjct: 61 NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 120
Query: 58 LLLDHGADV 66
L +
Sbjct: 121 FLYGVQEKM 129
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 42.1 bits (97), Expect = 3e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 33 VDLYDEHGMTPLQHAAYKGNKQICQLLLDH 62
+ D G+TPL+ A +G + + +L H
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 35.6 bits (80), Expect = 0.005
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 29 HKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDD 88
H V++ D G P+ H A + L +D++ R G + L A G D
Sbjct: 90 HGADVNVPDGTGALPI-HLAVQEGHTAVVSFLAAESDLHR-RDARGLTPLELALQRGAQD 147
Query: 89 VCACLLS 95
+ L
Sbjct: 148 LVDILQG 154
Score = 30.2 bits (66), Expect = 0.39
Identities = 10/51 (19%), Positives = 21/51 (41%)
Query: 7 GNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQ 57
G+ + ++ D+ V++LL + D + G T LQ + +
Sbjct: 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALE 53
Score = 30.2 bits (66), Expect = 0.39
Identities = 7/28 (25%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 42 TPLQHAAYKGNKQICQLLLD-HGADVNS 68
L AA +G+ Q + LL ++
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDA 31
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 42.2 bits (97), Expect = 3e-05
Identities = 7/35 (20%), Positives = 12/35 (34%)
Query: 29 HKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHG 63
V + G T A G ++ L+ +G
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 39.1 bits (89), Expect = 3e-04
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 42 TPLQHAAYKGNKQICQLLLDHGADVNS 68
L AA +G+ + LL + +VN+
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNA 29
Score = 37.2 bits (84), Expect = 0.002
Identities = 22/97 (22%), Positives = 44/97 (45%)
Query: 1 MSIPMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLL 60
G + ++ + + L E + V++ D G PL AA +G+ ++ + L+
Sbjct: 60 DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 119
Query: 61 DHGADVNSGRHEHGYSALHFAALSGKDDVCACLLSAG 97
H A R+ G +A A L G+++V + + + G
Sbjct: 120 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 32.9 bits (73), Expect = 0.039
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 76 SALHFAALSGKDDVCACLLSAGAKSYATNSVGRTASQM 113
+ L AA G + LL A N GRTA Q+
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQV 40
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 40.6 bits (93), Expect = 1e-04
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 42 TPLQHAAYKGNKQICQLLLDHGADVNSGRH 71
L AA G ++L+ +GA +
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWL 33
Score = 38.7 bits (88), Expect = 5e-04
Identities = 9/59 (15%), Positives = 24/59 (40%)
Query: 1 MSIPMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLL 59
+ M + ++++ V +LL ++ V + T + GN+ + ++L
Sbjct: 94 NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 37.9 bits (86), Expect = 0.001
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 36 YDEHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGYSALHFAALSGKDDVCACL 93
D MT L A ++++ +LL+ +GADV++ + + +A + +G +D+ L
Sbjct: 96 KDMLKMTALHWATEHNHQEVVELLIKYGADVHT-QSKFCKTAFDISIDNGNEDLAEIL 152
Score = 27.1 bits (58), Expect = 3.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 77 ALHFAALSGKDDVCACLLSAGAK 99
L AA +G+DD L++ GA
Sbjct: 5 KLLEAARAGQDDEVRILMANGAP 27
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 33.8 bits (75), Expect = 0.014
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 38 EHGMTPLQHAAYKGNKQICQLLLDHGADVNSGRHEHGY 75
E L AA +G + + LL+ GA+ N+
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRR 38
Score = 33.4 bits (74), Expect = 0.022
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 34 DLYDEHGMTPLQHAAYKGNKQICQLLLD 61
D+ D G P+ A G++ + + L
Sbjct: 96 DVRDAWGRLPVDLAEELGHRDVARYLRA 123
Score = 31.8 bits (70), Expect = 0.061
Identities = 8/27 (29%), Positives = 10/27 (37%)
Query: 70 RHEHGYSALHFAALSGKDDVCACLLSA 96
R G + A G DV L +A
Sbjct: 98 RDAWGRLPVDLAEELGHRDVARYLRAA 124
Score = 28.4 bits (61), Expect = 0.96
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 72 EHGYSALHFAALSGKDDVCACLLSAGA 98
E L AA G+ + LL AGA
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGA 27
>d1x4sa1 g.85.1.2 (A:8-53) Zinc finger HIT domain containing protein
2, ZNHIT2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 46
Score = 30.2 bits (68), Expect = 0.052
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 6/41 (14%)
Query: 329 CVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARS 369
C + A C +C YC C R H CA +
Sbjct: 10 CPAGEVQPARYTCPRCN-APYCSLRCYRTH-----GTCAEN 44
Score = 30.2 bits (68), Expect = 0.052
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 6/41 (14%)
Query: 429 CVTCGEENATKKCAKCKTTRYCDRECQRLHWFIHKKECARS 469
C + A C +C YC C R H CA +
Sbjct: 10 CPAGEVQPARYTCPRCN-APYCSLRCYRTH-----GTCAEN 44
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 148
Score = 30.8 bits (69), Expect = 0.16
Identities = 12/80 (15%), Positives = 27/80 (33%)
Query: 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGA 64
+EG +F + + D ++ + +R D D + + QL D
Sbjct: 37 LEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVV 96
Query: 65 DVNSGRHEHGYSALHFAALS 84
+ + +A A++
Sbjct: 97 ANDIEHTGNTSAASIPLAMA 116
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 118
Score = 27.2 bits (58), Expect = 2.2
Identities = 2/21 (9%), Positives = 5/21 (23%)
Query: 42 TPLQHAAYKGNKQICQLLLDH 62
A G+ + +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAK 24
>d1nf1a_ a.116.1.2 (A:) GAP related domain of neurofibromin {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 28.4 bits (63), Expect = 2.4
Identities = 13/132 (9%), Positives = 41/132 (31%), Gaps = 18/132 (13%)
Query: 183 VRKVVSLLSEKQMKAGPETNEIIQGDKPC-DLVELFVRKIHRPIHGEKYVAMFIRDCVRE 241
+ +++ + K+++ + +G+ ++ + +G Y+ + +R
Sbjct: 48 LYQLLWNMFSKEVELADSMQTLFRGNSLASKIMTFCFKV-----YGATYLQKLLDPLLRI 102
Query: 242 FPYREQGDKSCDLVELFVRKIHRPIHGEKYVAMF----------IRDCVREFPYRECMIF 291
D E+ ++ E+ I EFP + +
Sbjct: 103 --VITSSDWQHVSFEVDPTRLEPSESLEENQRNLLQMTEKFFHAIISSSSEFPPQLRSVC 160
Query: 292 KQMVSSLARSDP 303
+ +++ P
Sbjct: 161 HCLYQVVSQRFP 172
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS)
{Staphylococcus aureus [TaxId: 1280]}
Length = 194
Score = 27.7 bits (60), Expect = 3.0
Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 5/75 (6%)
Query: 1 MSIPMEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLL 60
+ P G + + + ++ + + + + GM K NK + LL
Sbjct: 125 HTAPGHGEDDYIVGQQYELPVISPIDDKGVFTEEGGQFEGMF-----YDKANKAVTDLLT 179
Query: 61 DHGADVNSGRHEHGY 75
+ GA + H Y
Sbjct: 180 EKGALLKLDFITHSY 194
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH)
{Thermus thermophilus [TaxId: 274]}
Length = 149
Score = 27.0 bits (59), Expect = 3.6
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Query: 5 MEGNEIFDFISKNDIDNVQKLLSEHKLRVDLYDEHGMTPLQHAAYKGNKQICQLLLDHGA 64
M G E+F F + + + + L + ++ L +
Sbjct: 36 MNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWER-V 94
Query: 65 DVNSGRHEHGYSALHFAALS 84
VN R+ + +A AL
Sbjct: 95 AVNVDRYGNTSTASIPLALK 114
>d1gkza1 a.29.5.1 (A:38-185) Branched-chain alpha-ketoacid
dehydrogenase kinase (BCK) {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 148
Score = 26.6 bits (59), Expect = 5.2
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Query: 165 PVRVA-----LNLLPSLISHLPSVRKVVSL 189
PVR+A LP +I P++ V L
Sbjct: 32 PVRIAHRIKGFRSLPFIIGCNPTILHVHEL 61
>d1y8oa1 a.29.5.1 (A:13-176) Pyruvate dehydrogenase kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 164
Score = 26.3 bits (58), Expect = 7.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 165 PVRVA-----LNLLPSLISHLPSVRKVVSL 189
PVR+A +NLLP + + PSV V S
Sbjct: 42 PVRLANTMREVNLLPDNLLNRPSVGLVQSW 71
>d1jm6a1 a.29.5.1 (A:1003-1169) Pyruvate dehydrogenase kinase {Rat
(Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Length = 167
Score = 25.9 bits (57), Expect = 9.2
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 165 PVRVA-----LNLLPSLISHLPSVRKVVSL 189
PVR+A +NLLP + PSV+ V S
Sbjct: 48 PVRLANIMKEINLLPDRVLSTPSVQLVQSW 77
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.405
Gapped
Lambda K H
0.267 0.0575 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,956,457
Number of extensions: 92276
Number of successful extensions: 425
Number of sequences better than 10.0: 1
Number of HSP's gapped: 375
Number of HSP's successfully gapped: 124
Length of query: 534
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 444
Effective length of database: 1,171,896
Effective search space: 520321824
Effective search space used: 520321824
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.3 bits)