BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2861
(1140 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NBH2|KY_HUMAN Kyphoscoliosis peptidase OS=Homo sapiens GN=KY PE=1 SV=2
Length = 561
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 148/388 (38%), Gaps = 64/388 (16%)
Query: 490 PMGLPRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAV 549
P + R K + Y LF+ +C AG+ C+ + GYSK GYQ G F F ++WNAV
Sbjct: 214 PTDILRTQKTNCDGYAGLFERMCRLAGVQCMTVPGYSKGFGYQTGQSF-SGEFDHAWNAV 272
Query: 550 YVAGAWRFVQCNWGARHLVNAKEVPKVGAKGKSDSLRHLDSAKQVLKVGAKGKSDSLRYE 609
Y+ G W V WG+ G D++ + +
Sbjct: 273 YLEGRWHLVDSTWGS---------------GLVDTI-----------------TSKFTFL 300
Query: 610 YDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKA 669
Y++ YFLT P FI + FP WQLLK SLR FE + +S F+ G+ T
Sbjct: 301 YNEFYFLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENNMYHKSEFYNKGMLSAHPETSM 360
Query: 670 VMYTDQTGAATVRIAMPVNMQSSLIFHYNLKLYDGDGDMLDGVSLKRFVMQSVVGNIVSF 729
+ + T+ P + +F N K G + S+ N +
Sbjct: 361 IRTVNGKATVTIESCAP----TLFMFMLNGKQEHG--------------LLSLRKNGMKL 402
Query: 730 RVHAPAAAEFLLDVFANSVTPREYLTGEPMKFKSVCKFKIVCTELYTVM-VPLPDCASGE 788
V+ P L +FA G + SV ++ + C Y M V LP
Sbjct: 403 EVYPPTMGTHKLQIFAK---------GNSDIYSSVLEYTLKCN--YVDMGVQLPAELHQP 451
Query: 789 WGPTKATRLFGLIPITHPEALIFAGK-EMEIQFRMSKPLTDFMSTLHKNGADEKKLNKCV 847
GP+ + G++ +HP+ +I I F + + + S +G ++ +
Sbjct: 452 VGPSWFSEQMGIMKPSHPDPIIHTSDGRCSISFSVEEGINVLASLHGDDGPITEETQRRY 511
Query: 848 THRILDQDIVSFIINFPEEGQYGFDVYT 875
++ + + P G++ +Y
Sbjct: 512 IFQLHREKQTELKVQLPHAGKFALKIYV 539
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 1067 FRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGL 1121
F + Y++ YFLT P FI + FP WQLLK SLR FE + +S F+ G+
Sbjct: 297 FTFLYNEFYFLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENNMYHKSEFYNKGM 351
>sp|Q8C8H8|KY_MOUSE Kyphoscoliosis peptidase OS=Mus musculus GN=Ky PE=1 SV=1
Length = 661
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 146/389 (37%), Gaps = 62/389 (15%)
Query: 490 PMGLPRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAV 549
P + R K + Y LF+ +C AG+ CV + GYSK GYQ G F F ++WNAV
Sbjct: 214 PTDILRTQKTNCDGYAGLFERMCRVAGVQCVTVPGYSKGFGYQTGQSF-SGEFDHAWNAV 272
Query: 550 YVAGAWRFVQCNWGARHLVNAKEVPKVGAKGKSDSLRHLDSAKQVLKVGAKGKSDSLRYE 609
Y+ G W V WG+ G D+ + +
Sbjct: 273 YLEGRWHLVDSTWGS---------------GLVDT-----------------TTSKFTFL 300
Query: 610 YDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKA 669
Y++ YFLT P FI + FP WQLLK SLR FE + +S F+ G+ T
Sbjct: 301 YNEFYFLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENSMYHKSEFYNKGMLSAHPETSM 360
Query: 670 VMYTDQTGAATVRIAMPVNMQSSLIFHYNLKLYDGDGDMLDGVSLKRFVMQSVVGNIVSF 729
+ + T+ P + +F N K G + S+ N +
Sbjct: 361 IRTVNGKATITIESRAP----TLFMFMLNGKQEHG--------------LLSLRKNGMKL 402
Query: 730 RVHAPAAAEFLLDVFANSVTPREYLTGEPMKFKSVCKFKIVCTELYTVMVPLPDCASGEW 789
V+ P L +FA G + SV ++ + C + V LP
Sbjct: 403 EVYPPTMGTHKLQIFAK---------GNSEIYSSVLEYTLKCNYV-DFSVQLPSELHQPV 452
Query: 790 GPTKATRLFGLIPITHPEALIFAGK-EMEIQFRMSKPLTDFMSTLHKNGADEKKLNKCVT 848
GP+ + G+ +H + +I I F + + ++ S +G ++ +
Sbjct: 453 GPSWFSEQMGITKPSHSDPIIHTSDGRCAISFSVEEGVSVLASLHGDDGPITEETQRRYI 512
Query: 849 HRILDQDIVSFIINFPEEGQYGFDVYTRE 877
++ + P G++ ++ ++
Sbjct: 513 FQLNRGKRTELKVQLPHAGKFALKIFVKK 541
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 1067 FRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGL 1121
F + Y++ YFLT P FI + FP WQLLK SLR FE + +S F+ G+
Sbjct: 297 FTFLYNEFYFLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENSMYHKSEFYNKGM 351
>sp|O14302|CYK3_SCHPO cytokinesis protein 3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cyk3 PE=1 SV=1
Length = 886
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 63/170 (37%), Gaps = 37/170 (21%)
Query: 506 VLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKF-EDNRFRNSWNAVYVAGAWRFVQCNWGA 564
+L K + L C VI+GY KS + + D ++WN V R + ++
Sbjct: 541 LLVKEMLQALDLWCEVIEGYLKSPD---DIYYTRDININHAWNVVTFDNEVRLIDASFA- 596
Query: 565 RHLVNAKEVPKVGAKGKSDSLRHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIY 624
S H +Q LK + +D YFL P E I+
Sbjct: 597 -------------------SPTH---PQQALKSSSS----------NDFYFLMKPNECIF 624
Query: 625 EFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTD 674
P P+ Q + +S+ LP+V S++F GL NT + D
Sbjct: 625 THVPENPDQQFIMPDLSMPIVMALPWVSSVYFTLGLKLRKFNTSILHLND 674
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1072 DDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAV 1131
+D YFL P E I+ P P+ Q + +S+ LP+V S++F GL NT +
Sbjct: 611 NDFYFLMKPNECIFTHVPENPDQQFIMPDLSMPIVMALPWVSSVYFTLGLKLRKFNTSIL 670
Query: 1132 MYTD 1135
D
Sbjct: 671 HLND 674
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 446,079,751
Number of Sequences: 539616
Number of extensions: 20109553
Number of successful extensions: 114416
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 105645
Number of HSP's gapped (non-prelim): 6086
length of query: 1140
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1011
effective length of database: 121,958,995
effective search space: 123300543945
effective search space used: 123300543945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)