Query psy2861
Match_columns 1140
No_of_seqs 440 out of 894
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 18:46:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2861.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2861hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3isr_A Transglutaminase-like e 99.8 1.1E-18 3.7E-23 192.4 11.0 110 393-565 127-236 (293)
2 3kd4_A Putative protease; stru 99.6 2.6E-15 9E-20 176.2 11.9 123 389-564 225-347 (506)
3 2f4m_A Peptide N-glycanase; gl 99.1 2.3E-11 7.9E-16 134.0 4.2 61 488-564 130-192 (295)
4 2q3z_A Transglutaminase 2; tra 98.6 4.1E-08 1.4E-12 118.5 7.1 69 496-564 272-363 (687)
5 1x3z_A Peptide: N-glycanase; h 98.6 1.7E-08 5.7E-13 112.7 3.4 60 489-564 172-233 (335)
6 1vjj_A Protein-glutamine gluta 98.6 6E-08 2E-12 116.9 7.6 67 498-564 269-358 (692)
7 1g0d_A Protein-glutamine gamma 98.4 5.8E-07 2E-11 108.3 11.7 66 498-563 269-359 (695)
8 1ex0_A Coagulation factor XIII 98.2 1.6E-06 5.5E-11 105.2 8.2 64 499-562 312-399 (731)
9 3isr_A Transglutaminase-like e 96.9 0.00011 3.6E-09 81.4 -1.4 61 1003-1069 172-235 (293)
10 4fgq_A Periplasmic protein; DU 96.2 0.0046 1.6E-07 64.8 5.5 107 392-561 29-140 (193)
11 2qsf_A RAD4, DNA repair protei 95.8 0.014 4.9E-07 69.4 8.0 72 491-563 153-236 (533)
12 3kd4_A Putative protease; stru 95.7 0.0012 4.2E-08 77.8 -1.2 66 1000-1067 275-345 (506)
13 2f4m_A Peptide N-glycanase; gl 95.3 0.0018 6.2E-08 71.8 -1.7 54 1001-1067 132-190 (295)
14 1e2t_A NAT, N-hydroxyarylamine 94.9 0.1 3.5E-06 57.3 10.6 67 494-565 65-131 (284)
15 2bsz_A Arylamine N-acetyltrans 94.6 0.12 4.2E-06 56.6 10.4 67 495-565 67-133 (278)
16 2ija_A Arylamine N-acetyltrans 93.5 0.12 3.9E-06 57.2 7.3 67 495-565 67-133 (295)
17 3lnb_A N-acetyltransferase fam 93.5 0.18 6.2E-06 56.3 9.0 67 495-565 93-159 (309)
18 1w4t_A Arylamine N-acetyltrans 93.3 0.21 7E-06 55.5 9.0 68 495-565 87-154 (299)
19 1w5r_A Arylamine N-acetyltrans 92.4 0.26 8.9E-06 54.0 8.1 70 494-566 66-137 (278)
20 2vfb_A Arylamine N-acetyltrans 92.4 0.26 9E-06 54.0 8.2 69 494-565 63-133 (280)
21 3d9w_A Putative acetyltransfer 91.9 0.3 1E-05 53.9 8.0 65 495-565 76-142 (293)
22 1vjj_A Protein-glutamine gluta 86.5 0.085 2.9E-06 64.4 -1.7 70 1008-1080 268-368 (692)
23 1g0d_A Protein-glutamine gamma 83.2 0.14 4.8E-06 62.4 -1.8 74 1009-1085 269-377 (695)
24 2q3z_A Transglutaminase 2; tra 82.7 0.11 3.8E-06 63.4 -2.9 32 1006-1039 271-302 (687)
25 1ex0_A Coagulation factor XIII 78.8 0.3 1E-05 60.0 -1.2 33 1006-1040 304-340 (731)
26 1x3z_A Peptide: N-glycanase; h 75.9 0.47 1.6E-05 53.5 -0.6 53 1002-1066 174-230 (335)
27 2bgo_A Endo-B1,4-mannanase 5C; 35.1 30 0.001 34.7 4.0 36 843-878 24-59 (140)
28 4g9s_B Inhibitor of G-type lys 34.6 54 0.0018 30.8 5.6 19 859-877 75-93 (111)
29 2xwx_A GBPA, glcnac-binding pr 27.3 91 0.0031 35.9 6.9 69 808-880 305-377 (391)
30 2lll_A Lamin-B2; immunoglobuli 26.8 1E+02 0.0036 30.6 6.4 48 831-880 36-88 (139)
31 3jt0_A Lamin-B1; structural ge 24.1 1.6E+02 0.0056 29.4 7.2 47 830-879 39-90 (144)
32 1wlh_A Gelation factor; ABP-12 23.0 7.2E+02 0.025 26.6 13.4 36 850-889 163-198 (311)
33 1ifr_A Lamin A/C; immunoglobul 22.1 1.3E+02 0.0044 29.2 5.9 48 831-880 21-73 (121)
No 1
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=99.76 E-value=1.1e-18 Score=192.40 Aligned_cols=110 Identities=12% Similarity=0.171 Sum_probs=92.3
Q ss_pred hHHHHHHHHhcCCCCChHHHHHHHHHhhccCCCcceEecCCCCCCCccccccccccccchhhhhhhhhcccccccccccc
Q psy2861 393 TFTDLVRQLAGRHATSDIEKARTLFRWITVKNLNTMSFDDNMAGDTPMGLLRGIKHGTESYHVLFKRLCRGIIAGFYPLF 472 (1140)
Q Consensus 393 s~~~La~~L~~~~~~tD~EKvRAIy~WI~~kN~~nI~YD~~~~~~~p~~~l~~i~~~~~sy~~l~kr~~~~~~~G~~P~~ 472 (1140)
.+.++|++++.+ ..++++|++||++||.+ ||.|+.+.... .
T Consensus 127 ~i~~~A~~~~~~-~~~~~~~~~ai~~~v~~----~~~Y~~~~~~~------------~---------------------- 167 (293)
T 3isr_A 127 KLQKLAYKEFGK-IENVYSKVLAITDWIYN----NVEYISGSTNS------------Q---------------------- 167 (293)
T ss_dssp GSHHHHHHHHTT-CCSHHHHHHHHHHHHHH----HSEECTTSCCT------------T----------------------
T ss_pred HHHHHHHHHhcc-CCCHHHHHHHHHHHHHh----hcEEeccCCCC------------C----------------------
Confidence 588999999987 88999999999999996 69999754221 0
Q ss_pred ccccccccccCCCCCCCCCCCCCCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEEC
Q psy2861 473 TVKNLNTMSFDNMTGDTPMGLPRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVA 552 (1140)
Q Consensus 473 ~~~~~~~~~f~~~~~~~p~~vL~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LD 552 (1140)
.++.++|..|+|+|++||+||++|||++||||++|+||+.+.+ ....|||++|+++
T Consensus 168 ---------------~~a~~~l~~~~G~C~d~A~l~val~Ra~GIPAR~VsGy~~~~~---------~~~~HAW~Evyl~ 223 (293)
T 3isr_A 168 ---------------TSAFDTITERAGVCRDFAHLGIALCRALSIPARYFTGYAFKLN---------PPDFHACFEAYIG 223 (293)
T ss_dssp ---------------CCHHHHHHHCEECHHHHHHHHHHHHHHTTCCEEEEEEEETTCS---------SCCEEEEEEEEET
T ss_pred ---------------CCHHHhhcCCcEehHHHHHHHHHHHHHCCCCEEEEEEECCCCC---------CCCeEEEEEEEEC
Confidence 1233456778999999999999999999999999999996542 2458999999999
Q ss_pred CeEEEEeeccCCC
Q psy2861 553 GAWRFVQCNWGAR 565 (1140)
Q Consensus 553 G~WylVDaTWgag 565 (1140)
|+|+.+|+||+.+
T Consensus 224 ggWv~~DpT~~~~ 236 (293)
T 3isr_A 224 GNWIIFDATRLVP 236 (293)
T ss_dssp TEEEEECTTCCSC
T ss_pred CcEEEEECCCCCC
Confidence 9999999999874
No 2
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=99.59 E-value=2.6e-15 Score=176.17 Aligned_cols=123 Identities=11% Similarity=0.073 Sum_probs=97.4
Q ss_pred ccchhHHHHHHHHhcCCCCChHHHHHHHHHhhccCCCcceEecCCCCCCCccccccccccccchhhhhhhhhcccccccc
Q psy2861 389 EDQHTFTDLVRQLAGRHATSDIEKARTLFRWITVKNLNTMSFDDNMAGDTPMGLLRGIKHGTESYHVLFKRLCRGIIAGF 468 (1140)
Q Consensus 389 ~~~~s~~~La~~L~~~~~~tD~EKvRAIy~WI~~kN~~nI~YD~~~~~~~p~~~l~~i~~~~~sy~~l~kr~~~~~~~G~ 468 (1140)
.....+.++|++|+.+ ..+++||++|||+||.+ ||+|+....+ ++|+
T Consensus 225 ~~~~~i~~~a~~l~~~-~~~~~ek~~~iy~~V~~----~i~y~~~~~~----------------------------~~g~ 271 (506)
T 3kd4_A 225 SQGYESKTFAQFLTDK-SGNEQEKVNIIRDHILN----NLSTCPIPMA----------------------------MTGY 271 (506)
T ss_dssp SCCHHHHHHHHHHHSS-CSSHHHHHHHHHHHHHH----HCEECCCCGG----------------------------GGTT
T ss_pred CCCHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHh----ccEecceecc----------------------------cCCC
Confidence 4457899999999998 99999999999999996 6999842110 1122
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEE
Q psy2861 469 YPLFTVKNLNTMSFDNMTGDTPMGLPRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNA 548 (1140)
Q Consensus 469 ~P~~~~~~~~~~~f~~~~~~~p~~vL~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNa 548 (1140)
.| .++.++|++|.|+|.++|+|+++|||++||||++|.++.+..|..+ ..+ ++ .||+|.+
T Consensus 272 ~~-----------------~~a~~vl~~~~G~C~d~a~Ll~AllRa~GIpA~~v~~~t~~~~~~~-~~l-p~-~nh~i~~ 331 (506)
T 3kd4_A 272 TV-----------------RDIDTVLRSAYGTPLEIAQLLNVMLNAAGIPSEVLAVYPGHLDTDA-CGL-AA-IQTLAVK 331 (506)
T ss_dssp CC-----------------CCHHHHHHHTEECHHHHHHHHHHHHHHTTCCEEEEEEEETTSCGGG-CCS-TT-CCEEEEE
T ss_pred CC-----------------CCHHHHHHhCCcchHHHHHHHHHHHHHCCCCcEEEEEEcCCCCCcc-CCC-CC-CCEEEEE
Confidence 22 2355678889999999999999999999999999999997665321 111 22 3999999
Q ss_pred EEECCeEEEEeeccCC
Q psy2861 549 VYVAGAWRFVQCNWGA 564 (1140)
Q Consensus 549 V~LDG~WylVDaTWga 564 (1140)
|++||+||++|+|-.+
T Consensus 332 v~~~g~~y~lDat~~~ 347 (506)
T 3kd4_A 332 ATVDGKDQYLSASPLT 347 (506)
T ss_dssp EEETTEEEEESSSCHH
T ss_pred EEECCEEEEEecCCcc
Confidence 9999999999998655
No 3
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=99.11 E-value=2.3e-11 Score=134.01 Aligned_cols=61 Identities=18% Similarity=0.333 Sum_probs=56.3
Q ss_pred CCCCCCCCCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEECC--eEEEEeeccCC
Q psy2861 488 DTPMGLPRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAG--AWRFVQCNWGA 564 (1140)
Q Consensus 488 ~~p~~vL~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LDG--~WylVDaTWga 564 (1140)
.+|..+|.+|+|+|.+||+||.+|||++||||++|+|| ..|||++||++| +|+.+|+|.+.
T Consensus 130 ~~~~~~l~~r~G~C~d~A~lf~al~Ra~GIpAR~V~Gy----------------~~HaW~Evy~~g~~gWv~~Dpt~~~ 192 (295)
T 2f4m_A 130 NNPEKLLETRCGRCGEWANCFTLCCRALGFEARYVWDY----------------TDHVWTEVYSPSQQRWLHCDACEDV 192 (295)
T ss_dssp CCHHHHHHHCEESHHHHHHHHHHHHHHTTCCEEEEEET----------------TTEEEEEEEETTTTEEEEEETTTTE
T ss_pred CCHHHHHHcCCEeeHHHHHHHHHHHHHCCCCEEEEcCC----------------CCEEEEEEEECCCCeEEEEeCCcCc
Confidence 35677899999999999999999999999999999998 169999999998 99999999875
No 4
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=98.58 E-value=4.1e-08 Score=118.52 Aligned_cols=69 Identities=10% Similarity=0.114 Sum_probs=51.7
Q ss_pred CcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCC----------C-CCCccCCCC----CCCceEEEEEEC--------
Q psy2861 496 GIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAG----------Y-QPGVKFEDN----RFRNSWNAVYVA-------- 552 (1140)
Q Consensus 496 ~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g----------~-~pg~~~~~~----~~nHAWNaV~LD-------- 552 (1140)
.|.|+|.+||+++..|||++||||++|+||..+.+ + ..|...... ...|||++||++
T Consensus 272 ~k~G~C~dfA~~~~~llRalGIPAR~VsGy~~~~~~~~~l~~d~~~~~~g~~~~~~~d~~~~~HAW~Ev~~~rpDLp~g~ 351 (687)
T 2q3z_A 272 VKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGY 351 (687)
T ss_dssp EEEECHHHHHHHHHHHHHHHTCCEEEEEEEEEECC--CCHHHHHHHC---------CCCCBSEEEEEEEEECCTTSSTTC
T ss_pred cceeehHHHHHHHHHHHHhCCCCcEEEeecccccccccccccccccCCCCceeeecCCcccceeEEEEEEcccCCCCCCC
Confidence 45799999999999999999999999999984411 0 012111111 248999999999
Q ss_pred CeEEEEeeccCC
Q psy2861 553 GAWRFVQCNWGA 564 (1140)
Q Consensus 553 G~WylVDaTWga 564 (1140)
+.|.-+|+|-+.
T Consensus 352 ~GW~~~DpT~~~ 363 (687)
T 2q3z_A 352 EGWQALDPTPQE 363 (687)
T ss_dssp CEEEEECCSSCC
T ss_pred CCEEEECCCCCc
Confidence 599999999875
No 5
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=98.58 E-value=1.7e-08 Score=112.73 Aligned_cols=60 Identities=18% Similarity=0.236 Sum_probs=53.9
Q ss_pred CCCCCCCCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEECC--eEEEEeeccCC
Q psy2861 489 TPMGLPRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAG--AWRFVQCNWGA 564 (1140)
Q Consensus 489 ~p~~vL~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LDG--~WylVDaTWga 564 (1140)
+|..+|.+|+|.|.+||+||..|||++||||++|.|+ ..|+|++|++++ +|..||+|-+.
T Consensus 172 ~~~~ll~tr~G~C~e~A~lF~~llRalGi~aR~V~~~----------------~~H~W~EV~~~~~~rWv~vDp~~~~ 233 (335)
T 1x3z_A 172 DPIKLLETRKGRCGEWCNLFTLILKSFGLDVRYVWNR----------------EDHVWCEYFSNFLNRWVHVDSCEQS 233 (335)
T ss_dssp CHHHHHHHCEECHHHHHHHHHHHHHTTTCCEEEEEET----------------TTEEEEEEEETTTTEEEEEETTTTE
T ss_pred CHHHHHHhCCcChHHHHHHHHHHHHHCCCCeEEEecC----------------CCcEEEEEEECCCCCEEEECCCCCc
Confidence 5777899999999999999999999999999999873 269999999985 89999999653
No 6
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=98.56 E-value=6e-08 Score=116.94 Aligned_cols=67 Identities=12% Similarity=0.220 Sum_probs=51.5
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCC-----------CCCccCCCCC----CCceEEEEEEC--------Ce
Q psy2861 498 KHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGY-----------QPGVKFEDNR----FRNSWNAVYVA--------GA 554 (1140)
Q Consensus 498 kGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~-----------~pg~~~~~~~----~nHAWNaV~LD--------G~ 554 (1140)
.|+|.+||+++..|||++||||++|+||..+.+. ..|....... ..||||+||++ |.
T Consensus 269 ~G~C~~fA~~~~~~lR~lGIPaR~Vtgy~s~~d~~~nL~~d~~~~~~g~~~~~~~dsIW~~HaW~E~w~~rpDLp~~~~g 348 (692)
T 1vjj_A 269 YGQCWVFAGTLNTALRSLGIPSRVITNFNSAHDTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGG 348 (692)
T ss_dssp EECHHHHHHHHHHHHHHHTCCEEEEEEEEEEECSSSSSEEEEEECTTSCBCCCCSCEEEEEEEEEEEEECCTTTCGGGCE
T ss_pred ceeeHHHHHHHHHHHHhCCCCeeEEcccccccCCCCCcccceeeccCCcccccccccccceeEEEEEeccccCCCCCCCC
Confidence 5999999999999999999999999999533211 0122211122 38999999998 79
Q ss_pred EEEEeeccCC
Q psy2861 555 WRFVQCNWGA 564 (1140)
Q Consensus 555 WylVDaTWga 564 (1140)
|+.+|+|-..
T Consensus 349 W~~~DpT~~~ 358 (692)
T 1vjj_A 349 WQVLDATPQE 358 (692)
T ss_dssp EEEECCSCSS
T ss_pred EEEECCCCCC
Confidence 9999999753
No 7
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=98.44 E-value=5.8e-07 Score=108.31 Aligned_cols=66 Identities=6% Similarity=0.129 Sum_probs=51.2
Q ss_pred ccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCC-----------CCCccCCC--CC----CCceEEEEEEC--------
Q psy2861 498 KHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGY-----------QPGVKFED--NR----FRNSWNAVYVA-------- 552 (1140)
Q Consensus 498 kGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~-----------~pg~~~~~--~~----~nHAWNaV~LD-------- 552 (1140)
.|+|..||+++..|||++||||++|+||..+.+- .-|..... .. ..|+||++|++
T Consensus 269 ~G~C~~fA~v~~t~lR~lGIPaR~Vtgy~sa~d~~~nL~id~~~~~~g~~~~~~~~~dsiw~~HaW~E~w~~rpDLp~~~ 348 (695)
T 1g0d_A 269 YGQCWVFAAVACTVLRCLGIPTRPITNFASAHDVDGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLPEGN 348 (695)
T ss_dssp EECHHHHHHHHHHHHHHHTCCEEEEEEEEETTTTTTCSEEEEEECTTSCBSCTTCCBCSSEEEEEEEEEEECCTTSCTTC
T ss_pred ceeeHHHHHHHHHHHHhCCCCeeEEccccccCCCCCccceeeeecccCceecccccCCcceeeEEEEEeecccCCCCCCC
Confidence 4999999999999999999999999999754321 01111110 11 48999999998
Q ss_pred CeEEEEeeccC
Q psy2861 553 GAWRFVQCNWG 563 (1140)
Q Consensus 553 G~WylVDaTWg 563 (1140)
|.|..+|+|-.
T Consensus 349 ~gWq~~DpTpq 359 (695)
T 1g0d_A 349 DGWQVLDPTPQ 359 (695)
T ss_dssp CEEEEEECSCC
T ss_pred CCeEEEcCCCc
Confidence 79999999974
No 8
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=98.20 E-value=1.6e-06 Score=105.18 Aligned_cols=64 Identities=14% Similarity=0.325 Sum_probs=50.0
Q ss_pred cccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCC-----------CCccCCC-CC----CCceEEEEEEC--------Ce
Q psy2861 499 HGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQ-----------PGVKFED-NR----FRNSWNAVYVA--------GA 554 (1140)
Q Consensus 499 GVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~-----------pg~~~~~-~~----~nHAWNaV~LD--------G~ 554 (1140)
|.|..||.++..|||++||||++|+||..+.+.. .|..... .. ..|+||++|++ |.
T Consensus 312 G~C~~fA~v~~~~lR~lGIPaRvVtgy~sa~d~~~~l~v~~~~~~~g~~~~~~~~dsIW~~H~W~E~w~~rpDLp~g~~G 391 (731)
T 1ex0_A 312 GQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGG 391 (731)
T ss_dssp ECHHHHHHHHHHHHHHHTCCEEEEEEEEECCSCTTBCEEEEEECTTSCBCTTTCCCCCEEEEEEEEEEECCTTSCTTCCE
T ss_pred eeehhHHHHHHHHHHhCCCCeeEEcccccCCCCCCcceeeEEecccCccccccccCccceeeEEEEEeccccCCCCCCCC
Confidence 9999999999999999999999999998644210 1111111 11 47999999997 68
Q ss_pred EEEEeecc
Q psy2861 555 WRFVQCNW 562 (1140)
Q Consensus 555 WylVDaTW 562 (1140)
|.-+|+|=
T Consensus 392 Wq~~DpTp 399 (731)
T 1ex0_A 392 WQAVDSTP 399 (731)
T ss_dssp EEEEEEEE
T ss_pred eEEEcCCC
Confidence 99999994
No 9
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=96.88 E-value=0.00011 Score=81.40 Aligned_cols=61 Identities=8% Similarity=0.019 Sum_probs=48.1
Q ss_pred cccccccccccCCCCccccccCCCCCCcceeeecccCCcccccccccCc-ee--EEEeeEEEEeeeeeec
Q psy2861 1003 PSIEDKCNQCSQSPHDTPHLFNCPGRPTTLTVIDLWQNPIATAEFLELP-TA--LLVLIQYFLIFPYFRY 1069 (1140)
Q Consensus 1003 ~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~-~a--~~v~~~~~~~~~~F~~ 1069 (1140)
.+|+.|+|+|++||++|-.++..+|||| -++-||..... -.+. +| +.++|.|+.|||++-.
T Consensus 172 ~~l~~~~G~C~d~A~l~val~Ra~GIPA--R~VsGy~~~~~----~~~~HAW~Evyl~ggWv~~DpT~~~ 235 (293)
T 3isr_A 172 DTITERAGVCRDFAHLGIALCRALSIPA--RYFTGYAFKLN----PPDFHACFEAYIGGNWIIFDATRLV 235 (293)
T ss_dssp HHHHHCEECHHHHHHHHHHHHHHTTCCE--EEEEEEETTCS----SCCEEEEEEEEETTEEEEECTTCCS
T ss_pred HhhcCCcEehHHHHHHHHHHHHHCCCCE--EEEEEECCCCC----CCCeEEEEEEEECCcEEEEECCCCC
Confidence 4678899999999999999999999999 89999943322 0223 44 4557899999998754
No 10
>4fgq_A Periplasmic protein; DUF920, protease, calcium binding, hydrolase; 1.65A {Legionella pneumophila subsp} PDB: 4fgo_A 4fgp_A
Probab=96.16 E-value=0.0046 Score=64.78 Aligned_cols=107 Identities=7% Similarity=0.109 Sum_probs=76.1
Q ss_pred hhHHHHHHHHhcCCCCChHHHHHHHHHhhccCCCcceEecCCCCCCCccccccccccccchhhhhhhhhccccccccccc
Q psy2861 392 HTFTDLVRQLAGRHATSDIEKARTLFRWITVKNLNTMSFDDNMAGDTPMGLLRGIKHGTESYHVLFKRLCRGIIAGFYPL 471 (1140)
Q Consensus 392 ~s~~~La~~L~~~~~~tD~EKvRAIy~WI~~kN~~nI~YD~~~~~~~p~~~l~~i~~~~~sy~~l~kr~~~~~~~G~~P~ 471 (1140)
..+.+++..+ + ..++.+|+..|-.+|- .|.|-.+... +|.+.|
T Consensus 29 ~~w~~l~~~~--~-~~~~~~~L~~VN~~vN-----~i~~~~D~~~-----------~G~~Dy------------------ 71 (193)
T 4fgq_A 29 TAWGNLIDSL--K-KKPVKIQLEKVNSFFN-----QFNYETDPIT-----------GASDDY------------------ 71 (193)
T ss_dssp HHHHHHHHHH--T-TSCHHHHHHHHHHHHH-----TSEECCCTTT-----------SSCCSS------------------
T ss_pred HHHHHHHHHh--h-CccHHHHHHHHHHHHH-----hcccccchhh-----------cCCCCc------------------
Confidence 4577777776 2 4679999999999996 3888765421 111111
Q ss_pred cccccccccccCCCCCCCCCCCCCCcccccHHHHHHHHHHHHHcCCcE---EEEEEEeCCCCCCCCccCCCCCCCceEEE
Q psy2861 472 FTVKNLNTMSFDNMTGDTPMGLPRGIKHGTESYHVLFKLLCSYAGLHC---VVIKGYSKSAGYQPGVKFEDNRFRNSWNA 548 (1140)
Q Consensus 472 ~~~~~~~~~~f~~~~~~~p~~vL~~rkGVC~gYA~Lf~~McraaGIpc---~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNa 548 (1140)
=..|.+.|..+.|+|+|||-+=..++.++|+|. +++..-.... ...|||.+
T Consensus 72 ---------------WatP~E~l~~g~GDCEDyaI~K~~~L~~~G~p~~~Lri~vVr~~~~-----------~~~HaVL~ 125 (193)
T 4fgq_A 72 ---------------WKSPVEFIVDGGGDCEDFAIIKYFTLVAVGVPSDQLRITYAASLTL-----------NQAHMVLS 125 (193)
T ss_dssp ---------------CCCHHHHHHHTEECHHHHHHHHHHHHHHHTCCGGGEEEEEEEETTT-----------TEEEEEEE
T ss_pred ---------------CCCcHhHhCCCCcCcHHHHHHHHHHHHHcCCCHHHeEEEEEEecCC-----------CCCCEEEE
Confidence 123556677778999999999999999999997 3333332221 23799999
Q ss_pred EEEC--CeEEEEeec
Q psy2861 549 VYVA--GAWRFVQCN 561 (1140)
Q Consensus 549 V~LD--G~WylVDaT 561 (1140)
|+.+ +.|+++|--
T Consensus 126 v~~~~~~~~lVLDNl 140 (193)
T 4fgq_A 126 FYPTPESEPLILDSL 140 (193)
T ss_dssp ECSSTTSCCEEECSS
T ss_pred EEECCCCCceEeeCC
Confidence 9996 789999973
No 11
>2qsf_A RAD4, DNA repair protein RAD4; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_A* 2qsh_A*
Probab=95.76 E-value=0.014 Score=69.36 Aligned_cols=72 Identities=8% Similarity=0.020 Sum_probs=51.9
Q ss_pred CCCCCCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCcc----------CCCCCCCceEEEEEE--CCeEEEE
Q psy2861 491 MGLPRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVK----------FEDNRFRNSWNAVYV--AGAWRFV 558 (1140)
Q Consensus 491 ~~vL~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~----------~~~~~~nHAWNaV~L--DG~WylV 558 (1140)
..++++++|-|...|.||.+|||++|++|++|..-- -.++..... .......|-|.+|+. .++|+.|
T Consensus 153 ~~~~~~~~Gs~d~~AqlF~aLlRalG~~aRlV~SLq-P~~f~~~k~~~~~~k~~~~~~~~~~P~~W~EV~s~~~~rWi~V 231 (533)
T 2qsf_A 153 LRAVSKGHGDPDISVQGFVAMLRACNVNARLIMSCQ-PPDFTNMKIDTSLNGNNAYKDMVKYPIFWCEVWDKFSKKWITV 231 (533)
T ss_dssp HHHHHHTEECHHHHHHHHHHHHHHTTCCEEEEEEEC-CCCTTCCBSCCCCC---CHHHHTTSCSEEEEEEETTTTEEEEE
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHCCCceEEEeccc-cccccccccccCcccCCccccccCCCeEEEEEEEcCCCeEEEE
Confidence 346788899999999999999999999999997531 111100000 001234699999997 4899999
Q ss_pred eeccC
Q psy2861 559 QCNWG 563 (1140)
Q Consensus 559 DaTWg 563 (1140)
|++-+
T Consensus 232 Dp~~~ 236 (533)
T 2qsf_A 232 DPVNL 236 (533)
T ss_dssp ESSSS
T ss_pred ecccc
Confidence 99865
No 12
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=95.73 E-value=0.0012 Score=77.75 Aligned_cols=66 Identities=11% Similarity=-0.061 Sum_probs=50.1
Q ss_pred hhccccccccccccCCCCccccccCCCCCCcceeeeccc-CCcccccccccCc----eeEEEeeEEEEeeeee
Q psy2861 1000 RINPSIEDKCNQCSQSPHDTPHLFNCPGRPTTLTVIDLW-QNPIATAEFLELP----TALLVLIQYFLIFPYF 1067 (1140)
Q Consensus 1000 ~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~~~i~~~-~~~~~~~~~~~~~----~a~~v~~~~~~~~~~F 1067 (1140)
.+.++|++|.|+|...|+||-+|+..+||||.+.++..- +|... ..|+-+ |.+.+||+||++||+-
T Consensus 275 ~a~~vl~~~~G~C~d~a~Ll~AllRa~GIpA~~v~~~t~~~~~~~--~~lp~~nh~i~~v~~~g~~y~lDat~ 345 (506)
T 3kd4_A 275 DIDTVLRSAYGTPLEIAQLLNVMLNAAGIPSEVLAVYPGHLDTDA--CGLAAIQTLAVKATVDGKDQYLSASP 345 (506)
T ss_dssp CHHHHHHHTEECHHHHHHHHHHHHHHTTCCEEEEEEEETTSCGGG--CCSTTCCEEEEEEEETTEEEEESSSC
T ss_pred CHHHHHHhCCcchHHHHHHHHHHHHHCCCCcEEEEEEcCCCCCcc--CCCCCCCEEEEEEEECCEEEEEecCC
Confidence 578999999999999999999999999999944444322 33221 222222 8888999999999943
No 13
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=95.29 E-value=0.0018 Score=71.76 Aligned_cols=54 Identities=9% Similarity=0.031 Sum_probs=45.4
Q ss_pred hccccccccccccCCCCccccccCCCCCCcceeeecccCCcccccccccCc-eeEEE--ee--EEEEeeeee
Q psy2861 1001 INPSIEDKCNQCSQSPHDTPHLFNCPGRPTTLTVIDLWQNPIATAEFLELP-TALLV--LI--QYFLIFPYF 1067 (1140)
Q Consensus 1001 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~-~a~~v--~~--~~~~~~~~F 1067 (1140)
+..+|++|+|+|++||++|-.++..+|||| -++-|| ++ .|+-| +| .|..|||+.
T Consensus 132 ~~~~l~~r~G~C~d~A~lf~al~Ra~GIpA--R~V~Gy-----------~~HaW~Evy~~g~~gWv~~Dpt~ 190 (295)
T 2f4m_A 132 PEKLLETRCGRCGEWANCFTLCCRALGFEA--RYVWDY-----------TDHVWTEVYSPSQQRWLHCDACE 190 (295)
T ss_dssp HHHHHHHCEESHHHHHHHHHHHHHHTTCCE--EEEEET-----------TTEEEEEEEETTTTEEEEEETTT
T ss_pred HHHHHHcCCEeeHHHHHHHHHHHHHCCCCE--EEEcCC-----------CCEEEEEEEECCCCeEEEEeCCc
Confidence 347899999999999999999999999999 888898 23 44444 55 899999964
No 14
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5
Probab=94.88 E-value=0.1 Score=57.33 Aligned_cols=67 Identities=10% Similarity=-0.053 Sum_probs=56.0
Q ss_pred CCCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEECCeEEEEeeccCCC
Q psy2861 494 PRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 565 (1140)
Q Consensus 494 L~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LDG~WylVDaTWgag 565 (1140)
.+.|-|-|.....||..+++++|..+..+.|-....+.. . .+...|+-+.|.+||+.|++|+-+|+.
T Consensus 65 ~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~~rV~~~~~~-~----~~~~~H~~l~V~idg~~ylvDVGFG~~ 131 (284)
T 1e2t_A 65 YARRGGYCFELNGLFERALRDIGFNVRSLLGRVILSHPA-S----LPPRTHRLLLVDVEDEQWIADVGFGGQ 131 (284)
T ss_dssp TTCCCBCHHHHHHHHHHHHHHTTCCEEEEEEEECTTCCS-S----CCCSCEEEEEEEETTEEEEECSCSCTT
T ss_pred cCCCcEEhHHHHHHHHHHHHHCCCeEEEEEEEEecCCCC-C----CCCCccEEEEEEECCceEEEecCCCcc
Confidence 367789999999999999999999999999988543211 1 124589999999999999999999985
No 15
>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5
Probab=94.63 E-value=0.12 Score=56.64 Aligned_cols=67 Identities=10% Similarity=-0.057 Sum_probs=55.2
Q ss_pred CCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEECCeEEEEeeccCCC
Q psy2861 495 RGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 565 (1140)
Q Consensus 495 ~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LDG~WylVDaTWgag 565 (1140)
+.|-|-|.....||..+++++|..+..+.|-..... ++. . .+...|+-+.|.+||+.|++|+-+|+.
T Consensus 67 ~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~arV~~~~--~~~-~-~~~~~H~~l~V~idg~~ylvDVGFG~~ 133 (278)
T 2bsz_A 67 GGRGGYCFEHNLLFMHALKALGFEVGGLAARVLWGQ--SED-A-ITARSHMLLRVELDGRTYIADVGFGGL 133 (278)
T ss_dssp SCCCBCHHHHHHHHHHHHHHHTCEEEEEEEEECSSC--CSS-S-SCCCCEEEEEEEETTEEEEECSCCSSS
T ss_pred CCCCeehHHHHHHHHHHHHHCCCeEEEEEEEEeeCC--CCC-C-CCCCccEEEEEEECCceEEEeCCCCcc
Confidence 667799999999999999999999999999884221 111 1 134589999999999999999999985
No 16
>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1, structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A*
Probab=93.46 E-value=0.12 Score=57.16 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=54.8
Q ss_pred CCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEECCeEEEEeeccCCC
Q psy2861 495 RGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 565 (1140)
Q Consensus 495 ~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LDG~WylVDaTWgag 565 (1140)
+.|-|-|.....||..+++++|..+..+.|-..... ++. + .+...|+-+.|.+||+.|++|+-+|+.
T Consensus 67 ~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~~rV~~~~--~~~-~-~~~~~H~~l~V~idg~~ylvDVGFG~~ 133 (295)
T 2ija_A 67 RNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYSTP--AKK-Y-STGMIHLLLQVTIDGRNYIVDAGSGRS 133 (295)
T ss_dssp TCCCBCHHHHHHHHHHHHHHHTCEEEEEEEEEEETT--TTE-E-CSSCCEEEEEEEETTEEEEECSCCCGG
T ss_pred CCCcEEhHHHHHHHHHHHHHcCCcEEEEEEEEeeCC--CCC-C-CCCCCcEEEEEEECCceEEEeCCCCCc
Confidence 667799999999999999999999999998875331 111 0 123589999999999999999999974
No 17
>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis}
Probab=93.46 E-value=0.18 Score=56.27 Aligned_cols=67 Identities=6% Similarity=-0.054 Sum_probs=55.4
Q ss_pred CCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEECCeEEEEeeccCCC
Q psy2861 495 RGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 565 (1140)
Q Consensus 495 ~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LDG~WylVDaTWgag 565 (1140)
+.|-|-|.....||..+++++|..+..+.|.....+.. .. .+...|.-+.|.+||+.|++|+-+|+.
T Consensus 93 ~~RGGyC~ElN~lf~~~L~~lGf~v~~~~arV~~~~~~---~~-~~~~~H~~l~V~~~g~~ylvDVGFG~~ 159 (309)
T 3lnb_A 93 QKRGGLCYELNSLLYYFLMDCGFQVYKVAGTVYDLYDN---KW-KPDDGHVIIILHHNKKDYVIDAGFASH 159 (309)
T ss_dssp TCCCBCHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTT---EE-CSTTCEEEEEEEETTEEEEECSCSTTC
T ss_pred cCCCcchHHHHHHHHHHHHHcCCeEEEEeEEEecCCCC---CC-CCCCccEEEEEEECCeEEEEecCCCCc
Confidence 66779999999999999999999999999988543211 01 123479999999999999999999974
No 18
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Probab=93.30 E-value=0.21 Score=55.46 Aligned_cols=68 Identities=12% Similarity=-0.017 Sum_probs=55.1
Q ss_pred CCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEECCeEEEEeeccCCC
Q psy2861 495 RGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 565 (1140)
Q Consensus 495 ~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LDG~WylVDaTWgag 565 (1140)
+.|-|-|.....||..+++++|..+..+.|-...... +. ...+...|+-+.|.+||+.|++|+-+|+.
T Consensus 87 ~~RGGyC~ElN~Lf~~~L~~LGF~V~~l~arV~~~~~--~~-~~~~~~~H~~l~V~idg~~ylvDVGFG~~ 154 (299)
T 1w4t_A 87 GSRGGYCFELNSLFARLLLALGYELELLVARVRWGLP--DD-APLTQQSHLMLRLYLAEGEFLVDVGFGSA 154 (299)
T ss_dssp TTCCBCHHHHHHHHHHHHHHTTCEEEEEEEEECTTCC--TT-SCCCCEEEEEEEEEETTEEEEECSCSGGG
T ss_pred cCCCcchHhHHHHHHHHHHHcCCeEEEEEEEEEeCCC--Cc-CCCCCCccEEEEEEECCceEEEeCCCCCc
Confidence 6677999999999999999999999999998853221 11 00024589999999999999999999975
No 19
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=92.38 E-value=0.26 Score=53.99 Aligned_cols=70 Identities=14% Similarity=0.038 Sum_probs=55.6
Q ss_pred CCCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEECCeE--EEEeeccCCCc
Q psy2861 494 PRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAW--RFVQCNWGARH 566 (1140)
Q Consensus 494 L~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LDG~W--ylVDaTWgag~ 566 (1140)
.+.|-|-|.....||..+++++|..+..+.|-..... .++.. .....|+-+.|.+||+. |++|+-+|+..
T Consensus 66 ~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~arV~~~~-~~~~~--~~~~~H~~l~V~idg~~~~ylvDVGFG~~~ 137 (278)
T 1w5r_A 66 DRRRGGYQYEHNGLLGYVLEELGFEVERLSGRVVWMR-ADDAP--LPAQTHNVLSVAVPGADGRYLVDVGFGGQT 137 (278)
T ss_dssp TTCCCBCHHHHHHHHHHHHHHHTCEEEEEEEEECTTC-CTTCC--CCCEEEEEEEEECSSCSCCEEECSCSCTTC
T ss_pred cCCCceehHHHHHHHHHHHHHcCCeEEEEEEEEeeCC-CCCCC--CCCCccEEEEEEECCeEEEEEEecCCCccC
Confidence 3677899999999999999999999999999884221 11110 02358999999999999 99999999853
No 20
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=92.35 E-value=0.26 Score=54.00 Aligned_cols=69 Identities=14% Similarity=0.071 Sum_probs=55.3
Q ss_pred CCCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEEEECCeE--EEEeeccCCC
Q psy2861 494 PRGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAW--RFVQCNWGAR 565 (1140)
Q Consensus 494 L~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV~LDG~W--ylVDaTWgag 565 (1140)
.+.|-|-|.....||..+++++|..+..+.|-..... .++.. .....|+-+.|.+||+. |++|+-+|+.
T Consensus 63 ~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~arV~~~~-~~~~~--~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 133 (280)
T 2vfb_A 63 DRRRGGYCYEHNGLIGYVLAELGYRVRRLAGRVVWLA-PPDAP--TPAQTHTVLAVTFPGCQGPYLVDVGFGGM 133 (280)
T ss_dssp TTCCCBCHHHHHHHHHHHHHHHTCEEEEEEEEECTTC-CTTSC--CCCSCEEEEEEECTTCSSCEEECSCSGGG
T ss_pred cCCCceEhHHHHHHHHHHHHHCCCeEEEEEEEEEeCC-CCCCC--CCCCCcEEEEEEECCeEEEEEEecCCCcc
Confidence 3677899999999999999999999999999884221 11110 02458999999999999 9999999975
No 21
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Probab=91.91 E-value=0.3 Score=53.94 Aligned_cols=65 Identities=9% Similarity=-0.079 Sum_probs=54.9
Q ss_pred CCcccccHHHHHHHHHHHHHcCCcEEEEEEEeCCCCCCCCccCCCCCCCceEEEE-EEC-CeEEEEeeccCCC
Q psy2861 495 RGIKHGTESYHVLFKLLCSYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAV-YVA-GAWRFVQCNWGAR 565 (1140)
Q Consensus 495 ~~rkGVC~gYA~Lf~~McraaGIpc~vV~Gy~Kg~g~~pg~~~~~~~~nHAWNaV-~LD-G~WylVDaTWgag 565 (1140)
+.|-|-|.....||..+++++|..+..+.|....... + .....|+-+.| .+| |+.|++|+-+|.+
T Consensus 76 ~~RGGyC~ElN~Lf~~~L~~LGF~V~~~~arV~~~~~-~-----~~~~~H~~l~V~~l~dg~~ylvDVGFG~~ 142 (293)
T 3d9w_A 76 SRRGGYCYENAGLFAAALERLGFGVTGHTGRVTMGAG-G-----LRPATHALLRVTTADDDRVWMCDVGFGRG 142 (293)
T ss_dssp SSCCBCHHHHHHHHHHHHHHTTCEEEEEEEEECTTCC-S-----CCCEEEEEEEEECSSCSCEEEECCSSSSC
T ss_pred cCCCcChHHHHHHHHHHHHHcCCeEEEEEEEEecCCC-C-----CCCCccEEEEEEEcCCCCeEEEecCCCcC
Confidence 5677999999999999999999999999999864321 1 12358999999 999 9999999999944
No 22
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=86.47 E-value=0.085 Score=64.38 Aligned_cols=70 Identities=13% Similarity=0.105 Sum_probs=47.9
Q ss_pred ccccccCCCCccccccCCCCCCcceeeecccCCccc------cccccc----------Cc-----eeEEE--e-------
Q psy2861 1008 KCNQCSQSPHDTPHLFNCPGRPTTLTVIDLWQNPIA------TAEFLE----------LP-----TALLV--L------- 1057 (1140)
Q Consensus 1008 ~~~~c~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~------~~~~~~----------~~-----~a~~v--~------- 1057 (1140)
|.|||.+||+++-+++.++|||| -+|.||++.-. ..+|++ |+ +|+-+ +
T Consensus 268 ~~G~C~~fA~~~~~~lR~lGIPa--R~Vtgy~s~~d~~~nL~~d~~~~~~g~~~~~~~dsIW~~HaW~E~w~~rpDLp~~ 345 (692)
T 1vjj_A 268 RYGQCWVFAGTLNTALRSLGIPS--RVITNFNSAHDTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPS 345 (692)
T ss_dssp EEECHHHHHHHHHHHHHHHTCCE--EEEEEEEEEECSSSSSEEEEEECTTSCBCCCCSCEEEEEEEEEEEEECCTTTCGG
T ss_pred cceeeHHHHHHHHHHHHhCCCCe--eEEcccccccCCCCCcccceeeccCCcccccccccccceeEEEEEeccccCCCCC
Confidence 35999999999999999999999 99999943322 112332 22 55544 3
Q ss_pred -eEEEEeeeeeecccCceeeccCh
Q psy2861 1058 -IQYFLIFPYFRYEYDDHYFLTDP 1080 (1140)
Q Consensus 1058 -~~~~~~~~~F~~~~nd~YFlt~P 1080 (1140)
+.|..+||+-. +..+.-|-.-|
T Consensus 346 ~~gW~~~DpT~~-~~s~g~~~CGP 368 (692)
T 1vjj_A 346 YGGWQVLDATPQ-ERSQGVFQCGP 368 (692)
T ss_dssp GCEEEEECCSCS-SCBTTBSCCCC
T ss_pred CCCEEEECCCCC-CccccccccCC
Confidence 78999999753 33444444444
No 23
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=83.18 E-value=0.14 Score=62.41 Aligned_cols=74 Identities=19% Similarity=0.166 Sum_probs=50.3
Q ss_pred cccccCCCCccccccCCCCCCcceeeecccCCcc------ccccccc------------Cc-----eeEEE--e------
Q psy2861 1009 CNQCSQSPHDTPHLFNCPGRPTTLTVIDLWQNPI------ATAEFLE------------LP-----TALLV--L------ 1057 (1140)
Q Consensus 1009 ~~~c~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~------~~~~~~~------------~~-----~a~~v--~------ 1057 (1140)
-|||.+||+++-+++.++|||| -||.||++.- ...+|++ |+ ||+-+ .
T Consensus 269 ~G~C~~fA~v~~t~lR~lGIPa--R~Vtgy~sa~d~~~nL~id~~~~~~g~~~~~~~~~dsiw~~HaW~E~w~~rpDLp~ 346 (695)
T 1g0d_A 269 YGQCWVFAAVACTVLRCLGIPT--RPITNFASAHDVDGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLPE 346 (695)
T ss_dssp EECHHHHHHHHHHHHHHHTCCE--EEEEEEEETTTTTTCSEEEEEECTTSCBSCTTCCBCSSEEEEEEEEEEECCTTSCT
T ss_pred ceeeHHHHHHHHHHHHhCCCCe--eEEccccccCCCCCccceeeeecccCceecccccCCcceeeEEEEEeecccCCCCC
Confidence 4999999999999999999999 9999994432 2223332 22 55555 2
Q ss_pred --eEEEEeeeeeecccCceeeccCh--HhHHh
Q psy2861 1058 --IQYFLIFPYFRYEYDDHYFLTDP--REFIY 1085 (1140)
Q Consensus 1058 --~~~~~~~~~F~~~~nd~YFlt~P--~~fi~ 1085 (1140)
+.|-.+||+.. +..+.-|-.-| ...|.
T Consensus 347 ~~~gWq~~DpTpq-e~s~g~~~CGPa~v~aIk 377 (695)
T 1g0d_A 347 GNDGWQVLDPTPQ-ELSDGEFCCGPCPVAAIK 377 (695)
T ss_dssp TCCEEEEEECSCC-TTSTTTCCEEEEEHHHHH
T ss_pred CCCCeEEEcCCCc-cccccccccCCCChhhee
Confidence 68999999763 34444444444 44554
No 24
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=82.73 E-value=0.11 Score=63.38 Aligned_cols=32 Identities=25% Similarity=0.383 Sum_probs=29.9
Q ss_pred ccccccccCCCCccccccCCCCCCcceeeecccC
Q psy2861 1006 EDKCNQCSQSPHDTPHLFNCPGRPTTLTVIDLWQ 1039 (1140)
Q Consensus 1006 ~~~~~~c~~~~~~~~~~~~~~g~~~~~~~i~~~~ 1039 (1140)
..|.|+|++||+++-.++.++|||| -++-||.
T Consensus 271 ~~k~G~C~dfA~~~~~llRalGIPA--R~VsGy~ 302 (687)
T 2q3z_A 271 RVKYGQCWVFAAVACTVLRCLGIPT--RVVTNYN 302 (687)
T ss_dssp CEEEECHHHHHHHHHHHHHHHTCCE--EEEEEEE
T ss_pred ccceeehHHHHHHHHHHHHhCCCCc--EEEeecc
Confidence 4789999999999999999999999 9999994
No 25
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=78.76 E-value=0.3 Score=60.00 Aligned_cols=33 Identities=15% Similarity=0.314 Sum_probs=29.9
Q ss_pred cccc----ccccCCCCccccccCCCCCCcceeeecccCC
Q psy2861 1006 EDKC----NQCSQSPHDTPHLFNCPGRPTTLTVIDLWQN 1040 (1140)
Q Consensus 1006 ~~~~----~~c~~~~~~~~~~~~~~g~~~~~~~i~~~~~ 1040 (1140)
++|+ |||.+||.++-+++.++|||| -||.||++
T Consensus 304 ~~~~PV~~G~C~~fA~v~~~~lR~lGIPa--RvVtgy~s 340 (731)
T 1ex0_A 304 SSENPVRYGQCWVFAGVFNTFLRCLGIPA--RIVTNYFS 340 (731)
T ss_dssp HHTSCEEEECHHHHHHHHHHHHHHHTCCE--EEEEEEEE
T ss_pred hcCCccceeeehhHHHHHHHHHHhCCCCe--eEEccccc
Confidence 4556 999999999999999999999 99999944
No 26
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=75.94 E-value=0.47 Score=53.53 Aligned_cols=53 Identities=8% Similarity=-0.050 Sum_probs=41.9
Q ss_pred ccccccccccccCCCCccccccCCCCCCcceeeecccCCcccccccccCceeEEEe----eEEEEeeee
Q psy2861 1002 NPSIEDKCNQCSQSPHDTPHLFNCPGRPTTLTVIDLWQNPIATAEFLELPTALLVL----IQYFLIFPY 1066 (1140)
Q Consensus 1002 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~a~~v~----~~~~~~~~~ 1066 (1140)
-++|+||+|.|.++|++|-.++..+|+||. +|=|+ .+-.|+.|. +.|.-+||.
T Consensus 174 ~~ll~tr~G~C~e~A~lF~~llRalGi~aR--~V~~~----------~~H~W~EV~~~~~~rWv~vDp~ 230 (335)
T 1x3z_A 174 IKLLETRKGRCGEWCNLFTLILKSFGLDVR--YVWNR----------EDHVWCEYFSNFLNRWVHVDSC 230 (335)
T ss_dssp HHHHHHCEECHHHHHHHHHHHHHTTTCCEE--EEEET----------TTEEEEEEEETTTTEEEEEETT
T ss_pred HHHHHhCCcChHHHHHHHHHHHHHCCCCeE--EEecC----------CCcEEEEEEECCCCCEEEECCC
Confidence 368999999999999999999999999994 34232 223566663 689999994
No 27
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=35.06 E-value=30 Score=34.72 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=25.4
Q ss_pred cccceEEEEecCcEEEEEEECCCCceeeEEEEEecC
Q psy2861 843 LNKCVTHRILDQDIVSFIINFPEEGQYGFDVYTREI 878 (1140)
Q Consensus 843 L~r~V~~~v~d~~~Vtf~V~lPeaG~YgL~IYaKe~ 878 (1140)
|.+||----.+++.|+|.|..|++|.|.|.|.-..+
T Consensus 24 ~~GyVggFen~gdsVtf~VdVP~tG~YdLsI~Ya~~ 59 (140)
T 2bgo_A 24 LVGNVGELQGAGSAVIWNVDVPVTGEYRINLTWSSP 59 (140)
T ss_dssp ECSSCEECCSTTCEEEEEECCCSSEEEEEEEEECCC
T ss_pred EeEeEccccCCCCEEEEEEecCCCcEEEEEEEeccC
Confidence 355543222222389999999999999999988544
No 28
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=34.61 E-value=54 Score=30.85 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=16.1
Q ss_pred EEEECCCCceeeEEEEEec
Q psy2861 859 FIINFPEEGQYGFDVYTRE 877 (1140)
Q Consensus 859 f~V~lPeaG~YgL~IYaKe 877 (1140)
+.+.||+.|.|.+++|-..
T Consensus 75 ~~~~LP~sG~Y~I~V~~~r 93 (111)
T 4g9s_B 75 GQYSLPASGKYELRVLQTR 93 (111)
T ss_dssp SCEECSSSEEEEEEEECCH
T ss_pred EEEEecCCccEEEEEEecc
Confidence 5677999999999999653
No 29
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=27.30 E-value=91 Score=35.95 Aligned_cols=69 Identities=6% Similarity=0.103 Sum_probs=46.5
Q ss_pred cEEEcCcEEEEEEeec--CCcceeeeccccCCcchhhcccceEEEEecCc--EEEEEEECCCCceeeEEEEEecCCC
Q psy2861 808 ALIFAGKEMEIQFRMS--KPLTDFMSTLHKNGADEKKLNKCVTHRILDQD--IVSFIINFPEEGQYGFDVYTREISP 880 (1140)
Q Consensus 808 aII~t~G~~eI~F~ls--rpL~~f~a~L~kdg~~E~~L~r~V~~~v~d~~--~Vtf~V~lPeaG~YgL~IYaKe~~~ 880 (1140)
-++..+|.++|.|.++ .++ .+.++|..- ......+..+++.++. .+++.+.=.++|.|.|.|.+++.+.
T Consensus 305 eY~i~~g~~~l~f~~~~~~~~-~v~~~v~d~---~~~~~~~~~~~v~~~~~~~~tl~ls~~~aGhh~lvv~~~~~~G 377 (391)
T 2xwx_A 305 EYEIGEQPIQLDLTLEAQGEM-SAELTVYNH---HQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKDRDG 377 (391)
T ss_dssp EEECCSSCCEEEEEEEEESSE-EEEEEEECT---TSCEEEEEEEEECTTCEEEEEEECSCCCSEEEEEEEEEEETTC
T ss_pred eeEecCCcEEEEEEEEecCce-EEEEEEEcC---CCCccceeeEEEcCCCcceEEEEccCCCCccEEEEEEEECCCC
Confidence 3455677666666555 665 588888652 2233455566777763 3666666679999999999997743
No 30
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=26.78 E-value=1e+02 Score=30.62 Aligned_cols=48 Identities=17% Similarity=0.256 Sum_probs=34.7
Q ss_pred eccccCCcchhhcccceEEEEecCcEEEEEEECCC-----CceeeEEEEEecCCC
Q psy2861 831 STLHKNGADEKKLNKCVTHRILDQDIVSFIINFPE-----EGQYGFDVYTREISP 880 (1140)
Q Consensus 831 a~L~kdg~~E~~L~r~V~~~v~d~~~Vtf~V~lPe-----aG~YgL~IYaKe~~~ 880 (1140)
-.|+..+..+..|.++.+....+++ -.....||. ||+. ++||++....
T Consensus 36 V~L~N~s~~~~~L~GW~L~r~v~g~-~~~~y~Fp~~~~L~pg~~-VtIws~~~g~ 88 (139)
T 2lll_A 36 VQLKNNSDKDQSLGNWRIKRQVLEG-EEIAYKFTPKYILRAGQM-VTVWAAGAGV 88 (139)
T ss_dssp EEEEECSSSCEECSSCEEEEEETTS-CEEEEECCTTCEECTTCE-EEEEEGGGTC
T ss_pred EEEEECCCCccccCCCEEEEecCCC-ccEEEEECCCcEECCCCE-EEEEeCCCCC
Confidence 3465566667799999888877652 235667887 8886 6899987644
No 31
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=24.10 E-value=1.6e+02 Score=29.42 Aligned_cols=47 Identities=11% Similarity=0.248 Sum_probs=33.1
Q ss_pred eeccccCCcchhhcccceEEEEecCcEEEEEEECC-----CCceeeEEEEEecCC
Q psy2861 830 MSTLHKNGADEKKLNKCVTHRILDQDIVSFIINFP-----EEGQYGFDVYTREIS 879 (1140)
Q Consensus 830 ~a~L~kdg~~E~~L~r~V~~~v~d~~~Vtf~V~lP-----eaG~YgL~IYaKe~~ 879 (1140)
.-.|+..+..+..|.++.+.+..+++.+ ...|| +||+. ++||++..+
T Consensus 39 fV~L~N~s~~~~~LgGW~L~r~v~g~~~--~y~FP~~~~L~pg~~-VtVwa~g~g 90 (144)
T 3jt0_A 39 FIRLKNTSEQDQPMGGWEMIRKIGDTSV--SYKYTSRYVLKAGQT-VTIWAANAG 90 (144)
T ss_dssp EEEEEECSSSCEECTTCEEEEEETTEEE--EEECCTTCEECTTCE-EEEEETTSC
T ss_pred EEEEEECCCCceecCCcEEEEEeCCCce--EEEcCCCcEECCCCE-EEEEECCCC
Confidence 3456566667889999988887776344 36777 56665 789998664
No 32
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=23.01 E-value=7.2e+02 Score=26.63 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=27.2
Q ss_pred EEecCcEEEEEEECCCCceeeEEEEEecCCCCCCCCCCCC
Q psy2861 850 RILDQDIVSFIINFPEEGQYGFDVYTREISPDHRAGSPGS 889 (1140)
Q Consensus 850 ~v~d~~~Vtf~V~lPeaG~YgL~IYaKe~~~~~~~~~~~~ 889 (1140)
...++ ...+...++++|.|.+.|..+..+ ..+++|.
T Consensus 163 d~~dG-ty~v~y~p~~~G~y~i~V~~~g~~---I~gSPF~ 198 (311)
T 1wlh_A 163 DNNDG-TYGVVYDAPVEGNYNVNVTLRGNP---IKNMPID 198 (311)
T ss_dssp EETTT-EEEEEECCCSSEEEEEEEEETTEE---CTTCSCE
T ss_pred ECCCC-EEEEEEECCCCEEEEEEEEECCEE---CCCCCEE
Confidence 34455 899999999999999999887542 3556763
No 33
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=22.11 E-value=1.3e+02 Score=29.19 Aligned_cols=48 Identities=15% Similarity=0.313 Sum_probs=32.7
Q ss_pred eccccCCcchhhcccceEEEEecCcEEEEEEECCC-----CceeeEEEEEecCCC
Q psy2861 831 STLHKNGADEKKLNKCVTHRILDQDIVSFIINFPE-----EGQYGFDVYTREISP 880 (1140)
Q Consensus 831 a~L~kdg~~E~~L~r~V~~~v~d~~~Vtf~V~lPe-----aG~YgL~IYaKe~~~ 880 (1140)
-.|+..+..+..|.++.+.+..+++ -.....||. ||+. ++||++....
T Consensus 21 V~l~N~s~~~~~L~gW~l~r~v~~~-~~~~y~Fp~~~~L~pg~~-vtIws~~~g~ 73 (121)
T 1ifr_A 21 VRLRNKSNEDQSMGNWQIKRQNGDD-PLLTYRFPPKFTLKAGQV-VTIWAAGAGA 73 (121)
T ss_dssp EEEEECSSSCEECTTCEEEEEETTS-CCEEEECCSSCEECTTCE-EEEEETTSSC
T ss_pred EEEEeCCCCccccCCCEEEEEcCCC-ccEEEEeCCCcEECCCCE-EEEEeCCCCC
Confidence 3455555567789999887776542 235566776 8885 6899987643
Done!