BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2865
(395 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 164
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 164
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 168
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 168
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 175 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 235 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 292
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 293 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ LK
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 184
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 157 LLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 216
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 217 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHK--NK 274
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A +A+ LL +ML F+P KRI V AL HPYL
Sbjct: 275 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ LK
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTSDLK 166
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 157 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 216
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 217 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 274
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 275 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 166
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 160 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 219
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 220 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 277
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 278 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 169
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 161 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 220
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 221 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 278
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 279 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 170
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 152 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 211
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 212 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 269
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 270 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 161
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 153 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 212
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 213 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 270
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 271 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 162
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 164
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 163 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 222
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 223 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 280
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 281 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 172
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 164
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 175 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 235 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 292
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 293 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 184
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEP--DPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLAR+ +P D +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 175 LLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXX 232
GCI AE+L R +F + + QL I +LG+P+ E++ + K Q+
Sbjct: 235 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINMKARNYLQSLPSKTKV 293
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ +A+ LL +ML F+P KRI+V AL HPYL++
Sbjct: 294 AWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLINTTCDLK 184
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 153 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 212
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P E++ + A+ ++L K
Sbjct: 213 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHK--NK 270
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 271 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 162
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 157 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 216
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 217 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 274
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A +A+ LL +ML F+P KRI V AL HPYL
Sbjct: 275 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 166
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KI DFGLARV +PD + +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 164
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + + + V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
++ T KICDFGLARV +PD + + + V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 160 LLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSV 219
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
GCI AE+L R +F + + QL I +LG+P+ E++ + A+ ++L K
Sbjct: 220 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 277
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A +A+ LL +ML F+P KRI V AL HPYL++
Sbjct: 278 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 169
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
Q ++ + + K+ DFGLAR P ++ T EVVT +YRAP++LMG++ YS +VD+WS+
Sbjct: 148 QNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ-TRKXXXX 231
GCIFAE++ + LF + QL I +LGTP P E + + +Q T +
Sbjct: 207 GCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV---QELPLWKQRTFQVFEK 263
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
E + LL ML FDP KRIS A+ HPY +
Sbjct: 264 KPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + + H RILHRD+KP NLL+NS+ LK
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALK 159
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
Q ++ + + K+ DFGLAR P ++ T EVVT +YRAP++LMG++ YS +VD+WS+
Sbjct: 148 QNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ-TRKXXXX 231
GCIFAE++ + LF + QL I +LGTP P E + + +Q T +
Sbjct: 207 GCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV---QELPLWKQRTFQVFEK 263
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
E + LL ML FDP KRIS A+ HPY +
Sbjct: 264 KPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + + H RILHRD+KP NLL+NS+ LK
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALK 159
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 150 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 209 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 267
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 268 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 296
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 81 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 141 LLINTEGAIK 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 133 LLINTEGAIK 142
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 135 LLINTEGAIK 144
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 147 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 206 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 264
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 265 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 293
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 78 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 138 LLINTEGAIK 147
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 133 LLINTEGAIK 142
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 133 LLINTEGAIK 142
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 150 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 209 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 267
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 268 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 296
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 81 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 141 LLINTEGAIK 150
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 327 ERKLTSV-QQVKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + V +++ F+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 73 ENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 133 LLINTEGAIK 142
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 124 KICDFGLARVEEPDPNKA---MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFG+AR P + MT+ V T++YRAPE+++ Y+ A+D+WSVGCIF E+L
Sbjct: 199 KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 258
Query: 181 GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXX 240
RR LF ++ V QL LI +LGTP+P ++ A + Q+
Sbjct: 259 ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ-AVGAERVRAYIQSLPPRQPVPWETVYPG 317
Query: 241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXX 300
A +A+ LL +ML F+P+ RIS +AL HP+L ++H
Sbjct: 318 ADRQALSLLGRMLRFEPSARISAAAALRHPFL----AKYHDP------------------ 355
Query: 301 XXXXXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEM 340
D EP PFD ++R+ + +++KE +
Sbjct: 356 ------------DDEPDCAPPFDFAFDREALTRERIKEAI 383
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA+++HRD+KP NLLVN NC LK
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLVNENCELK 199
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 124 KICDFGLARVEEPDPNKA---MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFG+AR P + MT+ V T++YRAPE+++ Y+ A+D+WSVGCIF E+L
Sbjct: 198 KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257
Query: 181 GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXX 240
RR LF ++ V QL LI +LGTP+P ++ A + Q+
Sbjct: 258 ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ-AVGAERVRAYIQSLPPRQPVPWETVYPG 316
Query: 241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXX 300
A +A+ LL +ML F+P+ RIS +AL HP+L ++H
Sbjct: 317 ADRQALSLLGRMLRFEPSARISAAAALRHPFL----AKYHDP------------------ 354
Query: 301 XXXXXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEM 340
D EP PFD ++R+ + +++KE +
Sbjct: 355 ------------DDEPDCAPPFDFAFDREALTRERIKEAI 382
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA+++HRD+KP NLLVN NC LK
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLVNENCELK 198
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 339 EMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++ KF+ A L +PL + + L + HS R+LHRD+KP NLL+N+ +K
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIK 146
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 145 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 263 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 291
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 76 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 135
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 136 LLINTEGAIK 145
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 145 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 263 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 291
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 76 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 136 LLINTEGAIK 145
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 77 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 137 LLINTEGAIK 146
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 133 LLINTEGAIK 142
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 77 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 137 LLINTEGAIK 146
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 145 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 263 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 291
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 76 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 136 LLINTEGAIK 145
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 133 LLINTEGAIK 142
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 134
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 135 LLINTEGAIK 144
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSV-QQVKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + V +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 77 ENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 137 LLINTEGAIK 146
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 345 AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A L +PL + + L + HS R+LHRD+KP NLL+N+ +K
Sbjct: 97 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 146
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 339 EMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++ KF+ A L +PL + + L + HS R+LHRD+KP NLL+N+ +K
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIK 144
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 135 LLINTEGAIK 144
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ F+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 77 ENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 137 LLINTEGAIK 146
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ F+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 134 LLINTEGAIK 143
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 145 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 263 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 291
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 345 AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A L +PL + + L + HS R+LHRD+KP NLL+N+ +K
Sbjct: 96 ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 145
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 147 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 206 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 264
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 265 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 293
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 78 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 138 LLINTEGAIK 147
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I LGTP E + + + G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL QML++DP KRIS +AL HP+ +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
E KL V + + +++ KF+ A L +PL + + L + HS R+LHRD+KP N
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 385 LLVNSNCILK 394
LL+N+ +K
Sbjct: 135 LLINTEGAIK 144
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ A HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 124 KICDFGLARV--------EEPDPNKA-MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
K+CDFGLAR+ EP ++ MT+ V T++YRAPE+++ + YS A+DVWS GC
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
I AEL RR +F + QL LI ++GTP + + + ++
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ + LL +ML FDP KRI+ AL HPYL
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 314 FEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQ-LNTSRVPLCINPQSAAFKSLKYLHS 372
F P F++ E + + ++ ++H+ I+ Q L+ + I +++K LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQ-ELMQTDLHRVISTQMLSDDHIQYFI---YQTLRAVKVLHG 130
Query: 373 ARILHRDIKPGNLLVNSNCILK 394
+ ++HRD+KP NLL+NSNC LK
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLK 152
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 170 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 283
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN + LK
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXELK 170
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 170 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 283
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN + LK
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXELK 170
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN + LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDXELK 165
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 124 KICDFGLARV--------EEPDPNKA-MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
K+CDFGLAR+ EP ++ MT+ V T++YRAPE+++ + YS A+DVWS GC
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
I AEL RR +F + QL LI ++GTP + + + ++
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ + LL +ML FDP KRI+ AL HPYL
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 314 FEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQ-LNTSRVPLCINPQSAAFKSLKYLHS 372
F P F++ E + + ++ ++H+ I+ Q L+ + I +++K LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQ-ELMQTDLHRVISTQMLSDDHIQYFI---YQTLRAVKVLHG 130
Query: 373 ARILHRDIKPGNLLVNSNCILK 394
+ ++HRD+KP NLL+NSNC LK
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLK 152
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 167 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 280
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN + LK
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDSELK 167
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 176 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 232 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 289
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 290 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN + LK
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDXELK 176
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 177 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 290
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 177
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 167 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 280
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 167
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 177 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 290
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 177
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 171 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN + LK
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDSELK 171
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 176 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 232 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 289
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 290 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 176
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 177 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 290
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 177
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 167 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 280
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 167
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 170 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 283
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 170
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 171 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 164 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 220 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 277
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 278 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 134 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 164
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 170 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 283
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 170
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 175 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 231 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 288
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 289 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 145 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 175
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 172 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 285
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 161 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 274
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 167 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 280
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 167
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 162 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 218 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 275
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 276 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 162
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 188 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 244 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 301
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 302 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 188
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 171 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 185 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 298
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 162 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 218 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 275
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 276 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 162
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 184 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 297
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 298 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 184
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 163 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 219 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 276
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 277 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 133 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 163
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 161 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 274
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 185 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 298
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 171 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 184 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 297
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 298 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 184
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 161 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 274
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
Query: 113 QLVMYQATYSSKICDFGLARVEEP-DPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWS 171
+++ +A + K+CDFG A+ P +PN A + ++YYRAPE++ G +HY+ AVD+WS
Sbjct: 161 NVLVNEADGTLKLCDFGSAKKLSPSEPNVAY---ICSRYYRAPELIFGNQHYTTAVDIWS 217
Query: 172 VGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXX 231
VGCIFAE++ +F+ + QL I +LG P+ E +R L ++
Sbjct: 218 VGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWS 277
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
EA LL +L + P +R+ ALCHPY DE
Sbjct: 278 NVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 369 YLHSARILHRDIKPGNLLVN 388
+L S + HRDIKP N+LVN
Sbjct: 146 HLPSVNVCHRDIKPHNVLVN 165
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 172 KILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 285
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 172 KILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 285
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 172 KILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 285
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI D+GLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDYGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 124 KICDFGLARV--------EEPDPNKA-MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
K+CDFGLAR+ EP ++ M + V T++YRAPE+++ + YS A+DVWS GC
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
I AEL RR +F + QL LI ++GTP + + + ++
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ + LL +ML FDP KRI+ AL HPYL
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 314 FEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQ-LNTSRVPLCINPQSAAFKSLKYLHS 372
F P F++ E + + ++ ++H+ I+ Q L+ + I +++K LH
Sbjct: 75 FNIQRPDSFENFNEVYIIQ-ELMQTDLHRVISTQMLSDDHIQYFI---YQTLRAVKVLHG 130
Query: 373 ARILHRDIKPGNLLVNSNCILK 394
+ ++HRD+KP NLL+NSNC LK
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLK 152
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRI 184
ICDF LAR + D NK T V ++YRAPE++M + ++ VD+WS GC+ AE+ R+
Sbjct: 175 ICDFNLAREDTADANK--THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
Query: 185 LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATGE 244
LF+ + QL I +++GTP E++ + LR + A
Sbjct: 233 LFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV 292
Query: 245 AVHLLVQMLYFDPTKRISVNSALCHPYLD 273
A+ L+ +ML F+P +RIS AL HPY +
Sbjct: 293 ALDLIAKMLEFNPQRRISTEQALRHPYFE 321
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAF------KSLKYLHSARILHRDIKPGNLLVNS 389
V E M +A+ ++ R+ I+PQ + L LH A ++HRD+ PGN+L+
Sbjct: 112 VTELMRTDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
Query: 390 N 390
N
Sbjct: 170 N 170
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + M V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 185 KILDFGLAR----HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 298
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + M V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 188 KILDFGLAR----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 244 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 301
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 302 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 188
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRI 184
ICDF LAR + D NK T V ++YRAPE++M + ++ VD+WS GC+ AE+ R+
Sbjct: 175 ICDFNLAREDTADANK--THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
Query: 185 LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATGE 244
LF+ + QL I +++GTP E++ + LR + A
Sbjct: 233 LFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV 292
Query: 245 AVHLLVQMLYFDPTKRISVNSALCHPYLD 273
A+ L+ +ML F+P +RIS AL HPY +
Sbjct: 293 ALDLIAKMLEFNPQRRISTEQALRHPYFE 321
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAF------KSLKYLHSARILHRDIKPGNLLVNS 389
V E M +A+ ++ R+ I+PQ + L LH A ++HRD+ PGN+L+
Sbjct: 112 VTELMRTDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
Query: 390 N 390
N
Sbjct: 170 N 170
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL R + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLCR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN + LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDSELK 165
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
Q ++ ++ K+ DFGLAR+ A+T VVT +YRAPE+L+ + Y+ VD+WSV
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSV 205
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXX 232
GCIFAE+ R+ LF+ S V QLG I D++G P E+ + RQ
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-----DVALPRQAFHSKSAQ 260
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
LL++ L F+P KRIS SAL HPY +
Sbjct: 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L +LHS R++HRD+KP N+LV S+ +K
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 160
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + M V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + M V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
Q ++ ++ K+ DFGLAR+ A+T VVT +YRAPE+L+ + Y+ VD+WSV
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSV 205
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXX 232
GCIFAE+ R+ LF+ S V QLG I D++G P E+ + RQ
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-----DVALPRQAFHSKSAQ 260
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
LL++ L F+P KRIS SAL HPY +
Sbjct: 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L +LHS R++HRD+KP N+LV S+ +K
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 160
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + M V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 161 KILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 274
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
Q ++ ++ K+ DFGLAR+ A+T VVT +YRAPE+L+ + Y+ VD+WSV
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSV 205
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXX 232
GCIFAE+ R+ LF+ S V QLG I D++G P E+ + RQ
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-----DVALPRQAFHSKSAQ 260
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
LL++ L F+P KRIS SAL HPY
Sbjct: 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L +LHS R++HRD+KP N+LV S+ +K
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 160
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI FGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILGFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ ++ + KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGC
Sbjct: 157 IVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 213
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
I E++ +ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLK 166
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ ++ + KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGC
Sbjct: 150 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 206
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
I E++ +ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 266
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 267 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDXTLK 159
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ ++ + KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGC
Sbjct: 157 IVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 213
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
I E++ +ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLK 166
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT++YRAPE+++ HY+ VD+WSVGCI AE+L +
Sbjct: 166 KILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF+ + + QL I + G P E ++ D AK ++ Q+ A+
Sbjct: 222 TLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI--QSLPQTPRKDFTQLFPRAS 279
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXX 302
+A LL +ML D KR++ AL HP+ + R
Sbjct: 280 PQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR-------------------------- 313
Query: 303 XXXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIA 345
+ E A QPFDD+ E + +V + K+ ++K I
Sbjct: 314 --------DPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIV 348
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K LKY+HSA ++HRD+KPGNL VN +C LK
Sbjct: 136 LKGLKYIHSAGVVHRDLKPGNLAVNEDCELK 166
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT++YRAPE+++ HY+ VD+WSVGCI AE+L +
Sbjct: 184 KILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF+ + + QL I + G P E ++ D AK ++ Q+ A+
Sbjct: 240 TLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI--QSLPQTPRKDFTQLFPRAS 297
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXX 302
+A LL +ML D KR++ AL HP+ + R
Sbjct: 298 PQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR-------------------------- 331
Query: 303 XXXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIA 345
+ E A QPFDD+ E + +V + K+ ++K I
Sbjct: 332 --------DPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIV 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K LKY+HSA ++HRD+KPGNL VN +C LK
Sbjct: 154 LKGLKYIHSAGVVHRDLKPGNLAVNEDCELK 184
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ ++ + KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGC
Sbjct: 157 IVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 213
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
I E++ +ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLK 166
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI D GLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDAGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+I DFGLAR ++ MT V T++YRAPEI++ HY+ VD+WSVGCI AELL +
Sbjct: 171 RILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-RHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL I +++GTP+PE + + + + A+ ++ Q+ A
Sbjct: 227 ALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI--QSLPPMPQKDLSSIFRGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A+ LL +ML D +R+S AL H Y +
Sbjct: 285 PLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP N+ VN + L+
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELR 171
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+I DFGLAR ++ MT V T++YRAPEI++ HY+ VD+WSVGCI AELL +
Sbjct: 163 RILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-RHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL I +++GTP+PE + + + + A+ ++ Q+ A
Sbjct: 219 ALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI--QSLPPMPQKDLSSIFRGAN 276
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A+ LL +ML D +R+S AL H Y +
Sbjct: 277 PLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP N+ VN +C L+
Sbjct: 133 LRGLKYIHSAGIIHRDLKPSNVAVNEDCELR 163
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+I DFGLAR ++ MT V T++YRAPEI++ HY+ VD+WSVGCI AELL +
Sbjct: 171 RILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-RHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL I +++GTP+PE + + + + A+ ++ Q+ A
Sbjct: 227 ALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI--QSLPPMPQKDLSSIFRGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
A+ LL +ML D +R+S AL H Y +
Sbjct: 285 PLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP N+ VN + L+
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELR 171
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DF LAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDFYLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ ++ + KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGC
Sbjct: 157 IVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 213
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
I E++ +ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLK 166
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI D GLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDGGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 58/213 (27%)
Query: 122 SSKICDFGLARV---------------EEPDPN-----------KAMTQEVVTQYYRAPE 155
S K+CDFGLAR E D N + +T VVT++YRAPE
Sbjct: 194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPE 253
Query: 156 ILMGARHYSAAVDVWSVGCIFAELL-------------------------------GRRI 184
+++ +Y+ A+DVWS+GCIFAELL G
Sbjct: 254 LILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDF 313
Query: 185 LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATGE 244
F + QL +I ++LGTP+ E++ A + + ++ +
Sbjct: 314 KFHTRGNRDQLNVIFNILGTPSEEDIE-ALEKEDAKRYIRIFPKREGTDLAERFPASSAD 372
Query: 245 AVHLLVQMLYFDPTKRISVNSALCHPYLDEGRL 277
A+HLL +ML F+P KRI++N L HP+ E R+
Sbjct: 373 AIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KY+HSA ILHRD+KP N LVN +C +K
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVK 196
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI D GLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 165 KILDRGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF + QL LI L+GTP E ++ + + A+ ++ Q+ A
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
AV LL +ML D KRI+ AL H Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 166 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 167 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 223
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 224 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 283
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 284 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 165 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 221
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 222 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 281
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 282 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 165
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 167 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 223
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 224 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 283
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 284 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 166 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 160 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 217 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 276
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 277 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 159 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 215
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 216 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 275
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 276 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 159
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 160 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 217 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 276
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 277 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 54/206 (26%)
Query: 122 SSKICDFGLARV----------------EEPDPN-----KAMTQEVVTQYYRAPEILMGA 160
S K+CDFGLAR EEP P+ K +T VVT++YRAPE+++
Sbjct: 167 SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ 226
Query: 161 RHYSAAVDVWSVGCIFAELL-----------GRRILF-----------------QAQSPV 192
+Y+ ++D+WS GCIFAELL R LF +S
Sbjct: 227 ENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNR 286
Query: 193 QQLGLITDLLGTPTPEEMRHAC--DGAKCHMLRQTRKXXXXXXXXXXXXXATGEAVHLLV 250
QL +I +++GTPT +++++ + K L RK + + ++LL
Sbjct: 287 DQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRK---PINLKQKYPSISDDGINLLE 343
Query: 251 QMLYFDPTKRISVNSALCHPYLDEGR 276
ML F+P KRI+++ AL HPYL + R
Sbjct: 344 SMLKFNPNKRITIDQALDHPYLKDVR 369
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
++H + I+HRD+KP N L+N +C +K
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVK 169
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 204 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHK 260
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 261 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 320
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 321 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 204 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 260
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 261 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 320
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML DP KRISV+ AL HPY++
Sbjct: 321 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT V T++YRAPEI++ HY+ VD+WSVGCI AELL R
Sbjct: 194 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF + QL I L GTP P + + + A
Sbjct: 250 TLFPGTDHINQLQQIMRLTGTP-PASVISRMPSHEARNYINSLPQMPKRNFADVFIGANP 308
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
AV LL +ML D KRI+ + AL HPY +
Sbjct: 309 LAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 164 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 194
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR N MT VVT+YYRAPE+++G Y VD+WSVGCI EL+
Sbjct: 164 KILDFGLART--ASTNFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGS 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-------RHACDGAKCH---MLRQTRKXXXXXX 233
++FQ + Q + + LGTP+ E M R+ + + +
Sbjct: 221 VIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPS 280
Query: 234 XXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
T +A LL +ML DP KRISV+ AL HPY+
Sbjct: 281 ESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 164
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
+P+ +V AT KI DFGLAR + MT VVT+YYRAPE+++G Y VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
+WSVGCI E++ +LF + Q + + LGTP+PE M+ + ++ + +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
+P+ +V AT KI DFGLAR + MT VVT+YYRAPE+++G Y VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
+WSVGCI E++ +LF + Q + + LGTP+PE M+ + ++ + +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
+P+ +V AT KI DFGLAR + MT VVT+YYRAPE+++G Y VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
+WSVGCI E++ +LF + Q + + LGTP+PE M+ + ++ + +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT EVVT+YYRAPE+++G Y VD+WSVGCI E++
Sbjct: 166 KILDFGLART--AGTSFMMTPEVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+LF + Q + + LGTP PE M+ + ++ + +
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 283 DSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + M VVT++YRAPE+++ Y+ VD+WSVGCI AE++ +
Sbjct: 168 KILDFGLAR----QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-RHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
LF+ + QL I + GTP E + R D AK +M + A+
Sbjct: 224 TLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM--KGLPELEKKDFASILTNAS 281
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLD 273
AV+LL +ML D +R++ AL HPY +
Sbjct: 282 PLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 346 EQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
E+L R+ + K L+Y+H+A I+HRD+KPGNL VN +C LK
Sbjct: 123 EKLGEDRIQFLV---YQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK 168
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR N MT VVT+YYRAPE+++G Y+A VD+WSVGCI EL+
Sbjct: 166 KILDFGLART--ACTNFMMTPYVVTRYYRAPEVILGM-GYAANVDIWSVGCIMGELVKGC 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHM----------LRQTRKXXXXXX 233
++FQ + Q + + LGTP+ E M + ++ +
Sbjct: 223 VIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPS 282
Query: 234 XXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
T +A LL +ML DP KRISV+ AL HPY+
Sbjct: 283 ESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 124 KICDFGLARVE-EPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG A++ +PN + ++YYRAPE++ GA +Y+ +D+WS GC+ AEL+
Sbjct: 182 KLIDFGSAKILIAGEPN---VSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
+ LF +S + QL I +LGTP+ E+++ H Q R
Sbjct: 239 QPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRP---HPFSKVFRPRTP 295
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+A+ L+ ++L + P+ R++ ALCHP+ DE R
Sbjct: 296 PDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
+SL Y+HS I HRDIKP NLL++
Sbjct: 151 LRSLAYIHSIGICHRDIKPQNLLLD 175
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + M EVVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 166 KILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEMVCHK 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR P + T EVVT +YRAP++LMG++ YS +D+WSVGCIFAE++
Sbjct: 140 KIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S QL I +LGTP + + + K + +
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES-- 256
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL +ML DP +RI+ AL H Y E
Sbjct: 257 -GIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ Y H R+LHRD+KP NLL+N LK
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELK 140
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++
Sbjct: 166 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+LF + Q + + LGTP+PE M+ + ++ + +
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR P + T EVVT +YRAP++LMG++ YS +D+WSVGCIFAE++
Sbjct: 140 KIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S QL I +LGTP + + + K + +
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES-- 256
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL +ML DP +RI+ AL H Y E
Sbjct: 257 -GIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ Y H R+LHRD+KP NLL+N LK
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELK 140
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++
Sbjct: 166 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+LF + Q + + LGTP+PE M+ + ++ + +
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR P + T E+VT +YRAP++LMG++ YS +D+WSVGCIFAE++
Sbjct: 140 KIADFGLARAFGI-PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S QL I +LGTP + + + K + +
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES-- 256
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ LL +ML DP +RI+ AL H Y E
Sbjct: 257 -GIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ Y H R+LHRD+KP NLL+N LK
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELK 140
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 160 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEMVCHK 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 217 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 276
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 277 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 171 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEMVCHK 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP PE M+ + ++ + +
Sbjct: 228 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 287
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 288 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 171
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR P + T E++T +YR PEIL+G+RHYS +VD+WS+ CI+AE+L +
Sbjct: 177 KIGDFGLARAFGI-PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF S + QL I ++LG P ++ A + K
Sbjct: 236 PLFPGDSEIDQLFKIFEVLGLP--DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDD 293
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
E + LL ML DP KRIS +AL HPY
Sbjct: 294 EGLDLLTAMLEMDPVKRISAKNALEHPYF 322
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
+ + HS R LHRD+KP NLL++
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLS 166
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++
Sbjct: 167 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 223
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+LF + Q + + LGTP PE M+ + ++ + +
Sbjct: 224 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 283
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 284 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
+P+ +V AT KI DFGLAR + MT VVT+YYRAPE+++G Y VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
+WSVG I E++ +LF + Q + + LGTP+PE M+ + ++ + +
Sbjct: 208 IWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + MT VVT+YYRAPE+++G Y VD+WSVGCI E++
Sbjct: 166 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+LF + Q + + LGTP PE M+ + ++ + +
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
+P+ +V AT KI DFGLAR + MT VVT+YYRAPE+++G Y VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
+WSVG I E++ +LF + Q + + LGTP+PE M+ + ++ + +
Sbjct: 208 IWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+ LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + M EVVT+YYRAPE+++G Y VD+WSVGCI E++ +
Sbjct: 166 KILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVCHK 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
ILF + + Q + + LGTP P M+ + ++ + +
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ + + K+ DFGLAR+ A+T VVT +YRAPE+L+ + Y+ VD+WSVGC
Sbjct: 151 ILVTSGGTVKLADFGLARIYSY--QMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGC 207
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
IFAE+ R+ LF S QLG I DL+G P ++ + R
Sbjct: 208 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-----DVSLPRGAFPPRGPRPV 262
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL--DEG 275
LL++ML F+P KRIS AL H YL DEG
Sbjct: 263 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 305
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L +LH+ I+HRD+KP N+LV S +K
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVK 160
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA+ PN+A +VVT++YRAPE+L GAR Y VD+W+VGCI AELL R
Sbjct: 152 KLADFGLAK-SFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
S + QL I + LGTPT E+ C T K A
Sbjct: 211 PFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY----VTFKSFPGIPLHHIFSAAGD 266
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ + L+ + F+P RI+ AL Y
Sbjct: 267 DLLDLIQGLFLFNPCARITATQALKMKYF 295
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L+YLH ILHRD+KP NLL++ N +LK
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLK 152
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 7/171 (4%)
Query: 112 RQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWS 171
+ L++ + K+CDFG A+ + P++ + +++YRAPE+++GA Y+ ++D+WS
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAK--KLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWS 227
Query: 172 VGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXX 231
+GC+F EL+ + LF ++ + QL I ++GTPT E+M H
Sbjct: 228 IGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIR----MNPHYTEVRFPTLKA 283
Query: 232 XXXXXXXXXATGE-AVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHS 281
T A+ LL Q+L ++P RI+ A+ HP+ D R + S
Sbjct: 284 KDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYES 334
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 26/105 (24%)
Query: 311 TVDFEPSAPQPFDD----------------------TWERKLTSVQQ-VKEEMHKFIAEQ 347
T D EP PQP DD + + L + + V + +HK +
Sbjct: 72 TGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSF 131
Query: 348 LNTSR-VPLCINPQSA--AFKSLKYLHSARILHRDIKPGNLLVNS 389
+ + R +P+ + F+++ ++HS I HRDIKP NLLVNS
Sbjct: 132 IRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR P + EVVT +YRAP++LMG+R YS ++D+WS GCI AE++ +
Sbjct: 148 KLGDFGLARAFGI-PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR--KXXXXXXXXXXXXXA 241
LF + +QL LI D++GTP K + Q R +
Sbjct: 207 PLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL 266
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
G + L +L +P R+S AL HP+ E
Sbjct: 267 DGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 360 QSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
Q + L + H +ILHRD+KP NLL+N LK
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLK 148
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGLAR + M VVT+YYRAPE+++G Y VD+WSVGCI E++
Sbjct: 168 KILDFGLART--AGTSFMMVPFVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 224
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+LF + Q + + LGTP PE M+ + ++ + +
Sbjct: 225 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 284
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
++ H LL +ML D +KRISV+ AL HPY++
Sbjct: 285 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 168
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ + + K+ DFGLAR+ A+ VVT +YRAPE+L+ + Y+ VD+WSVGC
Sbjct: 143 ILVTSGGTVKLADFGLARIYSY--QMALAPVVVTLWYRAPEVLLQST-YATPVDMWSVGC 199
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
IFAE+ R+ LF S QLG I DL+G P ++ + R
Sbjct: 200 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-----DVSLPRGAFPPRGPRPV 254
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL--DEG 275
LL++ML F+P KRIS AL H YL DEG
Sbjct: 255 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 297
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L +LH+ I+HRD+KP N+LV S +K
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVK 152
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ + + K+ DFGLAR+ A+ VVT +YRAPE+L+ + Y+ VD+WSVGC
Sbjct: 143 ILVTSGGTVKLADFGLARIYSY--QMALDPVVVTLWYRAPEVLLQST-YATPVDMWSVGC 199
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
IFAE+ R+ LF S QLG I DL+G P ++ + R
Sbjct: 200 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-----DVSLPRGAFPPRGPRPV 254
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL--DEG 275
LL++ML F+P KRIS AL H YL DEG
Sbjct: 255 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 297
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L +LH+ I+HRD+KP N+LV S +K
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVK 152
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ + + K+ DFGLAR+ A+ VVT +YRAPE+L+ + Y+ VD+WSVGC
Sbjct: 143 ILVTSGGTVKLADFGLARIYSY--QMALFPVVVTLWYRAPEVLLQST-YATPVDMWSVGC 199
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
IFAE+ R+ LF S QLG I DL+G P ++ + R
Sbjct: 200 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-----DVSLPRGAFPPRGPRPV 254
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL--DEG 275
LL++ML F+P KRIS AL H YL DEG
Sbjct: 255 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 297
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L +LH+ I+HRD+KP N+LV S +K
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVK 152
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLAR + P K EVVT +YR P+IL+G+ YS +D+W VGCIF E+ R
Sbjct: 140 KLADFGLARAKSI-PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LF + +QL I +LGTPT E + + + G
Sbjct: 199 PLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDG 258
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
LL ++L F+ RIS A+ HP+
Sbjct: 259 --ADLLTKLLQFEGRNRISAEDAMKHPFF 285
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L Y H ++LHRD+KP NLL+N LK
Sbjct: 110 LRGLAYCHRQKVLHRDLKPQNLLINERGELK 140
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 170 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 226
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 227 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 283
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 284 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 329
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 151 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 182
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 241
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 242 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 298
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 299 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 166 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 197
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 159 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 215
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 216 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 272
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 273 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 318
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 140 FRSLAYIHSFGICHRDIKPQNLLLDPD 166
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 219
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 220 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 276
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 277 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 322
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 144 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 175
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 219
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 220 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 276
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 277 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 322
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 144 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 175
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 152 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 208
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 209 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 265
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 266 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 311
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 133 FRSLAYIHSFGICHRDIKPQNLLLDPD 159
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 179 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 235
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 236 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 292
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 293 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 338
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 160 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 191
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 241
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 242 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 298
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 299 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 166 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 197
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 187 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 243
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 244 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 303
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 304 TKVFRPRTPP---EAIALCSRLLEYTPTARLTPLEACAHSFFDELR 346
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 168 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 199
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 189 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 245
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 246 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 305
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 306 TKVFRPRTPP---EAIALCSRLLEYTPTARLTPLEACAHSFFDELR 348
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 170 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 201
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + ++YYRAPE++ GA Y++++DVW
Sbjct: 155 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 211
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 212 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 268
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 269 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 136 FRSLAYIHSFGICHRDIKPQNLLLDPD 162
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 164 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 220
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 221 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 277
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 278 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 323
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 145 FRSLAYIHSFGICHRDIKPQNLLLDPD 171
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 230 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 286
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 287 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 346
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 347 TKVFRPRTPP---EAIALCSRLLEYTPTARLTPLEACAHSFFDELR 389
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 211 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 242
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
F+SL Y+HS I HRDIKP NLL++ +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ L++ T K+CDFG A+ + +PN + + ++YYRAPE++ GA Y++++DVW
Sbjct: 156 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 212
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
S GC+ AELL + +F S V QL I +LGTPT E++R Q +
Sbjct: 213 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 269
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
EA+ L ++L + PT R++ A H + DE R
Sbjct: 270 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 315
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN-CILK 394
F+SL Y+HS I HRDIKP NLL++ + +LK
Sbjct: 137 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK 168
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 92/209 (44%), Gaps = 57/209 (27%)
Query: 122 SSKICDFGLARVEEPDPN------------------------KAMTQEVVTQYYRAPEIL 157
S KICDFGLAR D + K +T VVT++YRAPE++
Sbjct: 169 SVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI 228
Query: 158 MGARHYSAAVDVWSVGCIFAELL-----------GRRILF-----------------QAQ 189
+ +Y+ ++D+WS GCIFAELL R LF +
Sbjct: 229 LLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEK 288
Query: 190 SPVQQLGLITDLLGTPTPEEMR--HACDGAKCHMLRQTRKXXXXXXXXXXXXXATGEAVH 247
S QL +I +++GTP E+++ + K L TR + E +
Sbjct: 289 SNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRD---GIDLSKKYSSISKEGID 345
Query: 248 LLVQMLYFDPTKRISVNSALCHPYLDEGR 276
LL ML F+ KRI+++ AL HPYL + R
Sbjct: 346 LLESMLRFNAQKRITIDKALSHPYLKDVR 374
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 368 KYLHSARILHRDIKPGNLLVNSNCILK 394
K++H + I+HRD+KP N L+N +C +K
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVK 171
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-GR 182
K+ DFGLAR P + + EVVT +YR P++L GA+ YS ++D+WS GCIFAEL
Sbjct: 141 KLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAA 199
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEE---MRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
R LF QL I LLGTPT E+ M D M T
Sbjct: 200 RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT----TSLVNVVPKL 255
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
ATG LL +L +P +RIS AL HPY +
Sbjct: 256 NATGR--DLLQNLLKCNPVQRISAEEALQHPYFSD 288
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K L + HS +LHRD+KP NLL+N N LK
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELK 141
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 109 QPTRQLVMYQATYSS--KICDFGLARV-EEP-DPNKAMTQEVVTQYYRAPEILMGARHYS 164
+P LVM + KI D G AR+ P P + VVT +YRAPE+L+GARHY+
Sbjct: 155 KPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYT 214
Query: 165 AAVDVWSVGCIFAELLGRRILF-------QAQSPVQ--QLGLITDLLGTPTP---EEMRH 212
A+D+W++GCIFAELL +F + +P QL I +++G P E+++
Sbjct: 215 KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKK 274
Query: 213 ACDGAKCHMLRQTRKXXXX-----XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSAL 267
+ + +++ R+ +A HLL ++L DP KRI+ A+
Sbjct: 275 MPEHST--LMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332
Query: 268 CHPYLDEGRLRFHSCMCKC 286
PY E L C
Sbjct: 333 QDPYFLEDPLPTSDVFAGC 351
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 366 SLKYLHSARILHRDIKPGNLLV 387
+ YLH+ +LHRD+KP N+LV
Sbjct: 140 GIHYLHANWVLHRDLKPANILV 161
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-GR 182
K+ +FGLAR P + + EVVT +YR P++L GA+ YS ++D+WS GCIFAEL
Sbjct: 141 KLANFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEE---MRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
R LF QL I LLGTPT E+ M D M T
Sbjct: 200 RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT----TSLVNVVPKL 255
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
ATG LL +L +P +RIS AL HPY +
Sbjct: 256 NATGR--DLLQNLLKCNPVQRISAEEALQHPYFSD 288
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K L + HS +LHRD+KP NLL+N N LK
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELK 141
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+CDFG AR+ P+ EV T++YR+PE+L+G Y VDVW++GC+FAELL
Sbjct: 142 KLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR--KXXXXXXXXXXXXXA 241
L+ +S V QL LI LG P RH + +
Sbjct: 201 PLWPGKSDVDQLYLIRKTLGDLIP---RHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNI 257
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ A+ LL L+ DPT+R++ L HPY + R
Sbjct: 258 SYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR 292
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++ + H +HRD+KP N+L+ + ++K
Sbjct: 111 TLQAVNFCHKHNCIHRDVKPENILITKHSVIK 142
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 124 KICDFGLARV----EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR + PN+ + VVT +YR PE+L+G R Y +D+W GCI AE+
Sbjct: 165 KLADFGLARAFSLAKNSQPNRYXNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
R + Q + QL LI+ L G+ TPE + + L +
Sbjct: 224 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY 283
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A+ L+ ++L DP +RI + AL H +
Sbjct: 284 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
L Y+H +ILHRD+K N+L+ + +LK
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLK 165
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLAR+ +P + +++ +VT++YR+P +L+ +Y+ A+D+W+ GCIFAE+L
Sbjct: 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
+ LF ++Q+ LI + + E+ + ++ +
Sbjct: 221 GKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYI--RNDMTEPHKPLTQLLPGI 278
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EAV L Q+L F P R++ AL HPY+
Sbjct: 279 SREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 316 PSAPQPFDDTWE-RKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAF-----KSLKY 369
PS Q DD +L SV V+E M +A L PL + + F + LKY
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG--PL-LEEHARLFMYQLLRGLKY 135
Query: 370 LHSARILHRDIKPGNLLVNS-NCILK 394
+HSA +LHRD+KP NL +N+ + +LK
Sbjct: 136 IHSANVLHRDLKPANLFINTEDLVLK 161
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 115 VMYQATYSSKICDFGLAR---------------VEE-----PDPNKAMTQEVVTQYYRAP 154
++ A K+ DFGL+R + E D +T V T++YRAP
Sbjct: 140 ILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP 199
Query: 155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEM---- 210
EIL+G+ Y+ +D+WS+GCI E+L + +F S + QL I ++ P+ E++
Sbjct: 200 EILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQ 259
Query: 211 ----RHACDGAKCHM-LRQTRKXXXXXXXXXXXXXA------TGEAVHLLVQMLYFDPTK 259
+ + K + +RQ+ K EA+ LL ++L F+P K
Sbjct: 260 SPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319
Query: 260 RISVNSALCHPYL 272
RIS N AL HP++
Sbjct: 320 RISANDALKHPFV 332
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K +KYLHS +LHRD+KP N+L+N+ C +K
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILLNAECHVK 149
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 124 KICDFGLARV----EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR + PN+ + VVT +YR PE+L+G R Y +D+W GCI AE+
Sbjct: 164 KLADFGLARAFSLAKNSQPNRYXNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
R + Q + QL LI+ L G+ TPE + + L +
Sbjct: 223 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY 282
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A+ L+ ++L DP +RI + AL H +
Sbjct: 283 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
L Y+H +ILHRD+K N+L+ + +LK
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLK 164
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 124 KICDFGLARV----EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR + PN+ + VVT +YR PE+L+G R Y +D+W GCI AE+
Sbjct: 165 KLADFGLARAFSLAKNSQPNRYXNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
R + Q + QL LI+ L G+ TPE + + L +
Sbjct: 224 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY 283
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A+ L+ ++L DP +RI + AL H +
Sbjct: 284 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
L Y+H +ILHRD+K N+L+ + +LK
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLK 165
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 124 KICDFGLARV----EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR + PN+ + VVT +YR PE+L+G R Y +D+W GCI AE+
Sbjct: 165 KLADFGLARAFSLAKNSQPNRYXNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
R + Q + QL LI+ L G+ TPE + + L +
Sbjct: 224 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY 283
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A+ L+ ++L DP +RI + AL H +
Sbjct: 284 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
L Y+H +ILHRD+K N+L+ + +LK
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLK 165
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+CDFG AR P + EV T++YRAPE+L+G Y AVDVW++GC+ E+
Sbjct: 164 KLCDFGFARTLAA-PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTP 207
LF S + QL I LG P
Sbjct: 223 PLFPGDSDIDQLYHIMMCLGNLIP 246
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + HS I+HRDIKP N+LV+ + ++K
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVK 164
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 167 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 224
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 225 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 284
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 285 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 136 LKALDYCHSQGIMHRDVKPHNVMID 160
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 168 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 225
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 226 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 285
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 286 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 324
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 137 LKALDYCHSQGIMHRDVKPHNVMID 161
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 167 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 224
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 225 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 284
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 285 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 136 LKALDYCHSQGIMHRDVKPHNVMID 160
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P K V ++Y++ PE+L+ + Y ++D+WS+GC+FA ++ R+
Sbjct: 187 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 244
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
F QL I +LGT + R D + + R +RK
Sbjct: 245 EPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 304
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
+ EA+ L ++L +D +R++ A+ HPY + R
Sbjct: 305 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 343
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 156 LKALDYCHSQGIMHRDVKPHNVMID 180
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ RR
Sbjct: 178 RLIDWGLA--EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRR 235
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH----------MLRQTRKXXXXX 232
F Q QL I +LGT EE+ K H + + +RK
Sbjct: 236 EPFFHGQDNYDQLVRIAKVLGT---EELYGYL--KKYHIDLDPHFNDILGQHSRKRWENF 290
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ LL ++L +D +R++ A+ HPY
Sbjct: 291 IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 147 LKALDYCHSKGIMHRDVKPHNVMID 171
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ RR
Sbjct: 173 RLIDWGLA--EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRR 230
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH----------MLRQTRKXXXXX 232
F Q QL I +LGT EE+ K H + + +RK
Sbjct: 231 EPFFHGQDNYDQLVRIAKVLGT---EELYGYL--KKYHIDLDPHFNDILGQHSRKRWENF 285
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ LL ++L +D +R++ A+ HPY
Sbjct: 286 IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 142 LKALDYCHSKGIMHRDVKPHNVMID 166
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 171 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 229 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 286 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMID 164
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 171 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 229 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 286 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMID 164
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 170 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 228 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 284
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 285 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 139 LKALDYCHSMGIMHRDVKPHNVMID 163
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 177 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 234
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 235 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 291
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 292 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 146 LKALDYCHSMGIMHRDVKPHNVMID 170
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N+L++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVLID 165
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ D+GLA E P + V ++Y++ PE+L+ + Y ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
F QL I +LGT E++ D + R +RK
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA+ L ++L +D R++ A+ HPY
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
K+L Y HS I+HRD+KP N++++
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMID 165
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
+P L+ Q K+ DFG + E ++ + + +++YRAPE+++GAR Y +D
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYE----HQRVYTXIQSRFYRAPEVILGAR-YGMPID 281
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPT 206
+WS+GCI AELL L + QL + +LLG P+
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
+P L+ Q K+ DFG + E ++ + + +++YRAPE+++GAR Y +D
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYE----HQRVYTXIQSRFYRAPEVILGAR-YGMPID 281
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPT 206
+WS+GCI AELL L + QL + +LLG P+
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
+P L+ Q K+ DFG + E ++ + + +++YRAPE+++GAR Y +D
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYE----HQRVYXXIQSRFYRAPEVILGAR-YGMPID 281
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTP 205
+WS+GCI AELL L + QL + +LLG P
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMP 318
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 41/174 (23%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFG A + ++ + V T++YRAPE+++ A +S DVWS+GCI E
Sbjct: 177 KVVDFGSATYD----DEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXX--XXXXA 241
+F + L ++ +LG P P+ HM+++TRK +
Sbjct: 232 TVFPTHDSKEHLAMMERILG-PLPK-----------HMIQKTRKRKYFHHDRLDWDEHSS 279
Query: 242 TGEAV----------------------HLLVQMLYFDPTKRISVNSALCHPYLD 273
G V L+ +ML +DP KRI++ AL HP+ D
Sbjct: 280 AGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 365 KSLKYLHSARILHRDIKPGNLL 386
KS+ +LHS ++ H D+KP N+L
Sbjct: 129 KSVNFLHSNKLTHTDLKPENIL 150
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 32/151 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ V E K M + + T YY APE+L + Y DVWS+G I LL
Sbjct: 179 KIVDFGLSAVFEN--QKKMKERLGTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGY 234
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
F Q+ + L + T E ++ +GAK
Sbjct: 235 PPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK------------------------- 269
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
L+ QML FD +RIS AL HP++ E
Sbjct: 270 ---DLIKQMLQFDSQRRISAQQALEHPWIKE 297
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 369 YLHSARILHRDIKPGNLLVNS 389
YLH I+HRD+KP NLL+ S
Sbjct: 151 YLHKHNIVHRDLKPENLLLES 171
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 41/188 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + + Q + +++YR+PE+L+G Y A+D+WS+GCI E+
Sbjct: 182 KIVDFG----SSCQLGQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGE 236
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPE--------------------EMRHACDGAKCHMLR 223
LF + V Q+ I ++LG P ++ DG + +
Sbjct: 237 PLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 296
Query: 224 QTRKXXXXXXXXXXXXXA--TGEAVH----------LLVQMLYFDPTKRISVNSALCHPY 271
TRK GE+ H L+++ML +DP RI AL H +
Sbjct: 297 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 356
Query: 272 L----DEG 275
DEG
Sbjct: 357 FKKTADEG 364
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 37/181 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + + Q + +++YR+PE+L+G Y A+D+WS+GCI E+
Sbjct: 201 KIVDFG----SSCQLGQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGE 255
Query: 184 ILFQAQSPVQQLGLITDLLGTP-----------------TPE---EMRHACDGAKCHMLR 223
LF + V Q+ I ++LG P P+ ++ DG + +
Sbjct: 256 PLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Query: 224 QTRKXXXXXXXXXXXXXA--TGEAVH----------LLVQMLYFDPTKRISVNSALCHPY 271
TRK GE+ H L+++ML +DP RI AL H +
Sbjct: 316 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 375
Query: 272 L 272
Sbjct: 376 F 376
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + + Q + +++YR+PE+L+G Y A+D+WS+GCI E+
Sbjct: 201 KIVDFG----SSCQLGQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGE 255
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPE--------------------EMRHACDGAKCHMLR 223
LF + V Q+ I ++LG P ++ DG + +
Sbjct: 256 PLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Query: 224 QTRKXXXXXXXXXXXXXA--TGEAVH----------LLVQMLYFDPTKRISVNSALCHPY 271
TRK GE+ H L+++ML +DP RI AL H +
Sbjct: 316 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 375
Query: 272 L 272
Sbjct: 376 F 376
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 41/174 (23%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFG A + ++ + V ++YRAPE+++ A +S DVWS+GCI E
Sbjct: 177 KVVDFGSATYD----DEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXX--XXXXA 241
+F + L ++ +LG P P+ HM+++TRK +
Sbjct: 232 TVFPTHDSKEHLAMMERILG-PLPK-----------HMIQKTRKRKYFHHDRLDWDEHSS 279
Query: 242 TGEAV----------------------HLLVQMLYFDPTKRISVNSALCHPYLD 273
G V L+ +ML +DP KRI++ AL HP+ D
Sbjct: 280 AGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 365 KSLKYLHSARILHRDIKPGNLL 386
KS+ +LHS ++ H D+KP N+L
Sbjct: 129 KSVNFLHSNKLTHTDLKPENIL 150
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S ++ DFG A + ++ T V T++YR PE+++ ++ DVWS+GCI E
Sbjct: 180 SIRVADFGSATFD----HEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYR 234
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRH---------------------------AC 214
LFQ + L ++ +LG P P M H C
Sbjct: 235 GFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 293
Query: 215 DGAKCHMLRQTRKXXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
K +ML+ + + + L+ +ML FDP +RI++ AL HP+
Sbjct: 294 KPLKSYMLQDSLEHV--------------QLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 41/175 (23%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S ++ DFG A + ++ T V T++YR PE+++ ++ DVWS+GCI E
Sbjct: 189 SIRVADFGSATFD----HEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYR 243
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
LFQ + L ++ +LG P P HM+ +TRK
Sbjct: 244 GFTLFQTHENREHLVMMEKILG-PIP-----------SHMIHRTRKQKYFYKGGLVWDEN 291
Query: 242 TGEAVH------------------------LLVQMLYFDPTKRISVNSALCHPYL 272
+ + + L+ +ML FDP +RI++ AL HP+
Sbjct: 292 SSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S ++ DFG A + ++ T V T++YR PE+++ ++ DVWS+GCI E
Sbjct: 212 SIRVADFGSATFD----HEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYR 266
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRH---------------------------AC 214
LFQ + L ++ +LG P P M H C
Sbjct: 267 GFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 325
Query: 215 DGAKCHMLRQTRKXXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
K +ML+ + + + L+ +ML FDP +RI++ AL HP+
Sbjct: 326 KPLKSYMLQDSLEHV--------------QLFDLMRRMLEFDPAQRITLAEALLHPFF 369
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 366 SLKYLHSARILHRDIKPGNLL-VNS 389
+L++LH ++ H D+KP N+L VNS
Sbjct: 167 ALRFLHENQLTHTDLKPENILFVNS 191
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 43/179 (24%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ DFG A + ++ + V T++YRAPE+++ +S DVWS+GCI E
Sbjct: 196 RVVDFGSATFD----HEHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGF 250
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
LFQ + L ++ +LG P P M+R+TRK T
Sbjct: 251 TLFQTHDNREHLAMMERILG-PIP-----------SRMIRKTRKQKYFYRGRLDWDENTS 298
Query: 244 ------------------------EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
+ L+ ML ++P KR+++ AL HP+ RLR
Sbjct: 299 AGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF--ARLR 355
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 365 KSLKYLHSARILHRDIKPGNLL-VNSNCILKW 395
+++K+LH ++ H D+KP N+L VNS+ L +
Sbjct: 148 QAVKFLHDNKLTHTDLKPENILFVNSDYELTY 179
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG AR++ PD N+ + T +Y APE L+ Y + D+WS+G I +L +
Sbjct: 149 KIIDFGFARLKPPD-NQPLKTPCFTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQ 206
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+ FQ+ L T E M+ G +
Sbjct: 207 VPFQSHD--------RSLTCTSAVEIMKKIKKG-------------DFSFEGEAWKNVSQ 245
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEG 275
EA L+ +L DP KR+ ++ + +L +G
Sbjct: 246 EAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 366 SLKYLHSARILHRDIKPGNLLV---NSNCILK 394
++ ++H ++HRD+KP NLL N N +K
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIK 149
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFG A + D + ++ + T+ YRAPE+++ + + D+WS GC+ AEL
Sbjct: 202 KLIDFGCATFKS-DYHGSI---INTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGS 256
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM 210
+LF+ ++ L ++ ++ P P+ M
Sbjct: 257 LLFRTHEHMEHLAMMESII-QPIPKNM 282
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + V+ + K+ DFGL+RV E DP+ A T + + APE + R
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI-AFR 229
Query: 162 HYSAAVDVWSVGCIFAELL 180
+S+A DVWS G + E+L
Sbjct: 230 TFSSASDVWSFGVVMWEVL 248
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + M + + T YY APE+L + Y DVWS G I LL
Sbjct: 164 KIVDFGLS--AHFEVGGKMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGY 219
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
F Q+ + L + + P + D
Sbjct: 220 PPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD---------------------------- 251
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
EA L+ ML ++P+KRIS AL HP++
Sbjct: 252 EAKQLVKLMLTYEPSKRISAEEALNHPWI 280
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 369 YLHSARILHRDIKPGNLLVNSN 390
YLH I+HRD+KP NLL+ S
Sbjct: 136 YLHKHNIVHRDLKPENLLLESK 157
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + V+ + K+ DFGL+RV E DP+ A T + + APE + R
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI-AFR 229
Query: 162 HYSAAVDVWSVGCIFAELL 180
+S+A DVWS G + E+L
Sbjct: 230 TFSSASDVWSFGVVMWEVL 248
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + M + + T YY APE+L + Y DVWS G I LL
Sbjct: 147 KIVDFGLSA--HFEVGGKMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGY 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
F Q+ + L + + P + D
Sbjct: 203 PPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD---------------------------- 234
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
EA L+ ML ++P+KRIS AL HP++
Sbjct: 235 EAKQLVKLMLTYEPSKRISAEEALNHPWI 263
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 369 YLHSARILHRDIKPGNLLVNS 389
YLH I+HRD+KP NLL+ S
Sbjct: 119 YLHKHNIVHRDLKPENLLLES 139
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + N M + T YY APE+L G Y DVWS G I LL
Sbjct: 164 KIIDFGLSTCFQQ--NTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGT 219
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
F ++ L + E ++A D L Q R +
Sbjct: 220 PPFYGKNEYDILKRV---------ETGKYAFD------LPQWR-------------TISD 251
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+A L+ +ML F P+ RI+ L HP++
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNS 389
F + Y+H I+HRD+KP N+L+ S
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLES 156
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + N M + T YY APE+L G Y DVWS G I LL
Sbjct: 164 KIIDFGLSTCFQQ--NTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGT 219
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
F ++ L + E ++A D L Q R +
Sbjct: 220 PPFYGKNEYDILKRV---------ETGKYAFD------LPQWR-------------TISD 251
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+A L+ +ML F P+ RI+ L HP++
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNS 389
F + Y+H I+HRD+KP N+L+ S
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLES 156
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 57/149 (38%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + N M + T YY APE+L G Y DVWS G I
Sbjct: 164 KIIDFGLSTCFQQ--NTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILY------ 213
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
IL P G + ++ G L Q R +
Sbjct: 214 ILLSGTPP---------FYGKNEYDILKRVETGKYAFDLPQWR-------------TISD 251
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+A L+ +ML F P+ RI+ L HP++
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
F + Y+H I+HRD+KP N+L+ S +C +K
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGLARV E DP A T + + +PE + R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCK 187
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 39/159 (24%)
Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRI 184
I DFGL+++E+ N M+ T Y APE+L + YS AVD WS+G I LL
Sbjct: 150 ITDFGLSKMEQ---NGIMSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVITYILLCGYP 205
Query: 185 LFQAQSPVQQLGLITD---LLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
F ++ + I + +P +++ + CH+L +
Sbjct: 206 PFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEK----------------- 248
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFH 280
DP +R + AL HP++D G H
Sbjct: 249 --------------DPNERYTCEKALSHPWID-GNTALH 272
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLL 386
++KYLH I+HRD+KP NLL
Sbjct: 118 AVKYLHENGIVHRDLKPENLL 138
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCK 187
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQE--VVTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + APE + R
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AFR 202
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 203 KFTSASDVWSYGIVMWEVV 221
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 136 GMKYLSDMGYVHRDLAARNILINSNLVCK 164
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL RV E DP A T + + +PE + R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCK 187
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCK 187
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCK 187
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 196
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 197 KFTSASDVWSYGIVLWEVM 215
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCK 158
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQE--VVTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 223
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 224 KFTSASDVWSYGIVLWEVM 242
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVCK 185
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCK 187
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 32/169 (18%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHY 163
GY R + +++ + K+ DFGL + + + + + Y APE++ G +
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 164 SAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR 223
+ DVWS+G + L+ + F + + I MR D K
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI-----------MRGKYDVPKW---- 232
Query: 224 QTRKXXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ ++ LL QML DP KRIS+ + L HP++
Sbjct: 233 -----------------LSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
++ Y+HS HRD+KP NLL + LK
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFDEYHKLK 148
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 196
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 197 KFTSASDVWSYGIVLWEVM 215
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCK 158
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 213
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 214 KFTSASDVWSYGIVLWEVM 232
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 147 GMKYLSDMGYVHRDLAARNILINSNLVCK 175
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCK 187
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V + K+ DFGLAR+ D + A T V T YY +PE M Y+ D+WS+GC
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHDTSFAKTF-VGTPYYMSPE-QMNRMSYNEKSDIWSLGC 204
Query: 175 IFAEL 179
+ EL
Sbjct: 205 LLYEL 209
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 38/156 (24%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFG A+ A+ T YY APE+L G Y + D+WS+G I LL
Sbjct: 152 KLTDFGFAK---ETTQNALQTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGF 207
Query: 184 ILF-----QAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXX 238
F QA SP + + G P PE
Sbjct: 208 PPFYSNTGQAISPGMKRRIRLGQYGFPNPE-----------------------------W 238
Query: 239 XXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ +A L+ +L DPT+R+++ + HP++++
Sbjct: 239 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 274
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS 389
++++LHS I HRD+KP NLL S
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTS 144
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+I DFGL+ E +K M ++ T YY APE+L G Y DVWS G I
Sbjct: 175 RIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILY------ 224
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
IL P G + ++ G L Q +K +
Sbjct: 225 ILLSGCPPFN---------GANEYDILKKVEKGKYTFELPQWKK-------------VSE 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A L+ +ML + P+ RIS AL H ++
Sbjct: 263 SAKDLIRKMLTYVPSMRISARDALDHEWI 291
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNC 391
+ Y+H +I+HRD+KP NLL+ S
Sbjct: 144 GITYMHKNKIVHRDLKPENLLLESKS 169
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 38/156 (24%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFG A+ A+ T YY APE+L G Y + D+WS+G I LL
Sbjct: 171 KLTDFGFAK---ETTQNALQTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGF 226
Query: 184 ILF-----QAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXX 238
F QA SP + + G P PE
Sbjct: 227 PPFYSNTGQAISPGMKRRIRLGQYGFPNPE-----------------------------W 257
Query: 239 XXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
+ +A L+ +L DPT+R+++ + HP++++
Sbjct: 258 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS 389
++++LHS I HRD+KP NLL S
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTS 163
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+I DFGL+ E +K M ++ T YY APE+L G Y DVWS G I
Sbjct: 169 RIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILY------ 218
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
IL P G + ++ G L Q +K +
Sbjct: 219 ILLSGCPPFN---------GANEYDILKKVEKGKYTFELPQWKK-------------VSE 256
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A L+ +ML + P+ RIS AL H ++
Sbjct: 257 SAKDLIRKMLTYVPSMRISARDALDHEWI 285
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNC 391
+ Y+H +I+HRD+KP NLL+ S
Sbjct: 138 GITYMHKNKIVHRDLKPENLLLESKS 163
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V + K+ DFGLAR+ D + A + V T YY +PE M Y+ D+WS+GC
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHDEDFA-KEFVGTPYYMSPE-QMNRMSYNEKSDIWSLGC 204
Query: 175 IFAEL 179
+ EL
Sbjct: 205 LLYEL 209
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 112 RQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDV 169
L+ Y SKI DFGL+++E DP ++ T Y APE+L + YS AVD
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDC 201
Query: 170 WSVGCIFAELL 180
WS+G I LL
Sbjct: 202 WSIGVIAYILL 212
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS 389
++KYLH I+HRD+KP NLL S
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYS 151
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+I DFGL+ E +K M ++ T YY APE+L G Y DVWS G I
Sbjct: 192 RIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILY------ 241
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
IL P G + ++ G L Q +K +
Sbjct: 242 ILLSGCPPFN---------GANEYDILKKVEKGKYTFELPQWKK-------------VSE 279
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A L+ +ML + P+ RIS AL H ++
Sbjct: 280 SAKDLIRKMLTYVPSMRISARDALDHEWI 308
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNC 391
+ Y+H +I+HRD+KP NLL+ S
Sbjct: 161 GITYMHKNKIVHRDLKPENLLLESKS 186
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+I DFGL+ E +K M ++ T YY APE+L G Y DVWS G I
Sbjct: 193 RIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILY------ 242
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
IL P G + ++ G L Q +K +
Sbjct: 243 ILLSGCPPFN---------GANEYDILKKVEKGKYTFELPQWKK-------------VSE 280
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
A L+ +ML + P+ RIS AL H ++
Sbjct: 281 SAKDLIRKMLTYVPSMRISARDALDHEWI 309
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNC 391
+ Y+H +I+HRD+KP NLL+ S
Sbjct: 162 GITYMHKNKIVHRDLKPENLLLESKS 187
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 112 RQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDV 169
L+ Y SKI DFGL+++E DP ++ T Y APE+L + YS AVD
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDC 201
Query: 170 WSVGCIFAELL 180
WS+G I LL
Sbjct: 202 WSIGVIAYILL 212
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS 389
++KYLH I+HRD+KP NLL S
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYS 151
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 112 RQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDV 169
L+ Y SKI DFGL+++E DP ++ T Y APE+L + YS AVD
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDC 201
Query: 170 WSVGCIFAELL 180
WS+G I LL
Sbjct: 202 WSIGVIAYILL 212
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNS 389
++KYLH I+HRD+KP NLL S
Sbjct: 125 VLDAVKYLHDLGIVHRDLKPENLLYYS 151
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
G+ R + ++ + K+ DFGL+RV E DP A T + + +PE + R
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVCK 187
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 112 RQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDV 169
L+ Y SKI DFGL+++E DP ++ T Y APE+L + YS AVD
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDC 201
Query: 170 WSVGCIFAELL 180
WS+G I LL
Sbjct: 202 WSIGVIAYILL 212
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS 389
++KYLH I+HRD+KP NLL S
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYS 151
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 27/151 (17%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S +ICDFG A+ + MT T + APE+L + Y AA D+WS+G + +L
Sbjct: 158 SIRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLE-RQGYDAACDIWSLGVLLYTMLT 215
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
F A P TPEE+ K +
Sbjct: 216 GYTPF-ANGP------------DDTPEEILARIGSGKFSL------------SGGYWNSV 250
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ A L+ +ML+ DP +R++ L HP++
Sbjct: 251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 365 KSLKYLHSARILHRDIKPGNLL 386
K+++YLH+ ++HRD+KP N+L
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNIL 148
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
+M AT + K+ DFG+AR D ++TQ + T Y +PE G A DV+S
Sbjct: 147 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 204
Query: 172 VGCIFAELLGRRILFQAQSPV 192
+GC+ E+L F SPV
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPV 225
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A ++L + H I+HRD+KP N+++++ +K
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
+M AT + K+ DFG+AR D ++TQ + T Y +PE G A DV+S
Sbjct: 147 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 204
Query: 172 VGCIFAELLGRRILFQAQSPV 192
+GC+ E+L F SPV
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPV 225
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A ++L + H I+HRD+KP N+++++ +K
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
+M AT + K+ DFG+AR D ++TQ + T Y +PE G A DV+S
Sbjct: 147 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 204
Query: 172 VGCIFAELLGRRILFQAQSPV 192
+GC+ E+L F SPV
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPV 225
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A ++L + H I+HRD+KP N+++++ +K
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 124 KICDFGLARVEE-------------PDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
KI DFGLA+ P + +T + T Y A E+L G HY+ +D++
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY 215
Query: 171 SVGCIFAELL 180
S+G IF E++
Sbjct: 216 SLGIIFFEMI 225
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
++L Y+HS I+HRD+KP N+ ++
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFID 150
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 124 KICDFGLARVEE-------------PDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
KI DFGLA+ P + +T + T Y A E+L G HY+ +D++
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY 215
Query: 171 SVGCIFAELL 180
S+G IF E++
Sbjct: 216 SLGIIFFEMI 225
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
++L Y+HS I+HRD+KP N+ ++
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFID 150
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 VPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
V IN + +K+ H RI+HRDIKP N+L++SN LK
Sbjct: 110 VDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLK 151
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARH 162
Y R + ++ + K+ DFGL+RV E DP T + + APE + R
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI-SYRK 226
Query: 163 YSAAVDVWSVGCIFAELL--GRRILFQAQSPVQQLGLITDLLGTPTP 207
+++A DVWS G + E++ G R ++ S + + I D PTP
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWEL-SNHEVMKAINDGFRLPTP 272
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 340 MHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ KF+ E+ V + +KYL + +HRD+ N+LVNSN + K
Sbjct: 133 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCK 187
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
GY R + ++ + K+ DFGL+RV E DP T + + APE + R
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ-YR 223
Query: 162 HYSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 224 KFTSASDVWSYGIVMWEVM 242
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
++YL +HRD+ N+LVNSN + K
Sbjct: 157 GMRYLADMGYVHRDLAARNILVNSNLVCK 185
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
+M AT + K+ DFG+AR D ++TQ + T Y +PE G A DV+S
Sbjct: 164 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 221
Query: 172 VGCIFAELLGRRILFQAQSPV 192
+GC+ E+L F SPV
Sbjct: 222 LGCVLYEVLTGEPPFTGDSPV 242
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A ++L + H I+HRD+KP N+++++ +K
Sbjct: 142 ACQALNFSHQNGIIHRDVKPANIMISATNAVK 173
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 41/156 (26%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+ICDFG A+ + MT T + APE+L + Y D+WS+G + +L
Sbjct: 165 RICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLK-RQGYDEGCDIWSLGILLYTMLAGY 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-------RHACDGAKCHMLRQTRKXXXXXXXXX 236
F A P + TPEE+ + G + + +T K
Sbjct: 223 TPF-ANGP------------SDTPEEILTRIGSGKFTLSGGNWNTVSETAK--------- 260
Query: 237 XXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
L+ +ML+ DP +R++ L HP++
Sbjct: 261 ----------DLVSKMLHVDPHQRLTAKQVLQHPWV 286
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 365 KSLKYLHSARILHRDIKPGNLL 386
K+++YLHS ++HRD+KP N+L
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNIL 153
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T+ T YY APE+L G Y + D+WS+G I LL
Sbjct: 158 KLTDFGFAK--ETTSHNSLTEPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 211
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 158
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 41/158 (25%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+ICDFG A+ + MT T + APE+L + Y D+WS+G + +L
Sbjct: 165 RICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLK-RQGYDEGCDIWSLGILLYTMLAGY 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-------RHACDGAKCHMLRQTRKXXXXXXXXX 236
F A P + TPEE+ + G + + +T K
Sbjct: 223 TPF-ANGP------------SDTPEEILTRIGSGKFTLSGGNWNTVSETAK--------- 260
Query: 237 XXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
L+ +ML+ DP +R++ L HP++ +
Sbjct: 261 ----------DLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 365 KSLKYLHSARILHRDIKPGNLL 386
K+++YLHS ++HRD+KP N+L
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNIL 153
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + T T Y APE+L H S VDVWS+GCI LL
Sbjct: 157 KIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 211
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 368 KYLHSARILHRDIKPGNLLVNSNCILK 394
+YLH R++HRD+K GNL +N + +K
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLEVK 157
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + T T Y APE+L H S VDVWS+GCI LL
Sbjct: 161 KIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 215
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 368 KYLHSARILHRDIKPGNLLVNSNCILK 394
+YLH R++HRD+K GNL +N + +K
Sbjct: 135 QYLHRNRVIHRDLKLGNLFLNEDLEVK 161
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V + K+ DFGLAR+ D + A V T YY +PE M Y+ D+WS+GC
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHDTSFAKAF-VGTPYYMSPE-QMNRMSYNEKSDIWSLGC 204
Query: 175 IFAEL 179
+ EL
Sbjct: 205 LLYEL 209
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + T T Y APE+L H S VDVWS+GCI LL
Sbjct: 157 KIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 211
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 368 KYLHSARILHRDIKPGNLLVNSNCILK 394
+YLH R++HRD+K GNL +N + +K
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLEVK 157
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARH 162
Y R + ++ + K+ DFG++RV E DP A T + + APE + R
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AYRK 189
Query: 163 YSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 190 FTSASDVWSYGIVMWEVM 207
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+LVNSN + K
Sbjct: 122 GMKYLSDMSYVHRDLAARNILVNSNLVCK 150
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARH 162
Y R + ++ + K+ DFG++RV E DP A T + + APE + R
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AYRK 195
Query: 163 YSAAVDVWSVGCIFAELL 180
+++A DVWS G + E++
Sbjct: 196 FTSASDVWSYGIVMWEVM 213
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+LVNSN + K
Sbjct: 128 GMKYLSDMSYVHRDLAARNILVNSNLVCK 156
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQ--YYRAPEILMGARH 162
Y R + V+ ++ + KI DFGL + E D ++ ++ APE LM ++
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF 206
Query: 163 YSAAVDVWSVGCIFAELL 180
Y A+ DVWS G ELL
Sbjct: 207 YIAS-DVWSFGVTLHELL 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 30/149 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA +E +A T Y +PE+L Y VD+W+ G I LL
Sbjct: 146 KLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLR-KEAYGKPVDIWACGVILYILL--- 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+G P + H L Q K T
Sbjct: 201 ------------------VGYPPFWDEDQ-------HKLYQQIKAGAYDFPSPEWDTVTP 235
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
EA +L+ QML +P KRI+ + AL HP++
Sbjct: 236 EAKNLINQMLTINPAKRITAHEALKHPWV 264
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNC 391
+++ + H ++HRD+KP NLL+ S C
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLASKC 140
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQ--YYRAPEILMGARH 162
Y R + V+ ++ + KI DFGL + E D ++ ++ APE LM ++
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF 194
Query: 163 YSAAVDVWSVGCIFAELL 180
Y A+ DVWS G ELL
Sbjct: 195 YIAS-DVWSFGVTLHELL 211
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 210 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 263
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 210
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 204 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 257
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 204
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARHYSAAVDVWSV 172
++ + K+ DFGL+RV E DP A T + + +PE + R +++A DVWS
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSY 236
Query: 173 GCIFAELL 180
G + E++
Sbjct: 237 GIVLWEVM 244
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+L+NSN + K
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINSNLVCK 187
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 158 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 211
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 158
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 160 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 213
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 160
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARHYSAAVDVWSV 172
++ + K+ DFG++RV E DP A T + + APE + R +++A DVWS
Sbjct: 162 ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSY 220
Query: 173 GCIFAELL 180
G + E++
Sbjct: 221 GIVMWEVM 228
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+LVNSN + K
Sbjct: 143 GMKYLSDMSAVHRDLAARNILVNSNLVCK 171
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 166 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 219
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 166
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 165 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 218
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 165
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 159 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 212
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 159
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 160 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 213
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 160
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 164 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 217
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 164
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
+M AT + K+ DFG+AR D ++TQ + T Y +PE G A DV+S
Sbjct: 147 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 204
Query: 172 VGCIFAELLGRRILFQAQSP 191
+GC+ E+L F SP
Sbjct: 205 LGCVLYEVLTGEPPFTGDSP 224
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A ++L + H I+HRD+KP N+++++ +K
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D+WS+G I LL
Sbjct: 174 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 227
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 174
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 30/149 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA +E +A T Y +PE+L Y VD+W+ G I LL
Sbjct: 173 KLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDIWACGVILYILL--- 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+G P + H L Q K T
Sbjct: 228 ------------------VGYPPFWDEDQ-------HKLYQQIKAGAYDFPSPEWDTVTP 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
EA +L+ QML +P KRI+ + AL HP++
Sbjct: 263 EAKNLINQMLTINPAKRITADQALKHPWV 291
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNC 391
+S+ ++H I+HRD+KP NLL+ S C
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKC 167
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 17/148 (11%)
Query: 143 TQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS------PVQQLG 196
T + T+ YR+PE+L+GA + D+WS C+ EL+ LF+ +
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 197 LITDLLGTPTPEEMRHACDGAKCH----MLRQTRKXX------XXXXXXXXXXXATGEAV 246
I +LLG +R+ +LR K E
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311
Query: 247 HLLVQMLYFDPTKRISVNSALCHPYLDE 274
L ML DP KR + HP+L +
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 17/148 (11%)
Query: 143 TQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS------PVQQLG 196
T + T+ YR+PE+L+GA + D+WS C+ EL+ LF+ +
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 197 LITDLLGTPTPEEMRHACDGAKCH----MLRQTRKXX------XXXXXXXXXXXATGEAV 246
I +LLG +R+ +LR K E
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311
Query: 247 HLLVQMLYFDPTKRISVNSALCHPYLDE 274
L ML DP KR + HP+L +
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSV 172
++ AT + K+ DFG+AR N V T Y +PE G A DV+S+
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG-DSVDARSDVYSL 205
Query: 173 GCIFAELLGRRILFQAQSPV 192
GC+ E+L F SPV
Sbjct: 206 GCVLYEVLTGEPPFTGDSPV 225
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A ++L + H I+HRD+KP N+L+++ +K
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANILISATNAVK 156
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S K+ DFG P+ +K T V T Y+ APE++ + Y VD+WS+G + E++
Sbjct: 154 SVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIE 211
Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
+ ++P++ L LI GTP PE++
Sbjct: 212 GEPPYLNENPLRALYLIAT-NGTPELQNPEKL 242
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++L++LHS +++HRDIK N+L+ + +K
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGSVK 156
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 31/151 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFG+A ++ + V T ++ APE++ Y VDVW G I LL
Sbjct: 173 KLGDFGVA-IQLGESGLVAGGRVGTPHFMAPEVVK-REPYGKPVDVWGCGVILFILLSGC 230
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+ F G+I P + H + AK
Sbjct: 231 LPFYGTKERLFEGIIKGKYKM-NPRQWSHISESAK------------------------- 264
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
L+ +ML DP +RI+V AL HP+L E
Sbjct: 265 ---DLVRRMLMLDPAERITVYEALNHPWLKE 292
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNS 389
++L+Y H I+HRD+KP N+L+ S
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLAS 165
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVG 173
++ +++KI DFGLAR E M +V T Y APE L G + D++S G
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--EITPKSDIYSFG 221
Query: 174 CIFAELL 180
+ E++
Sbjct: 222 VVLLEII 228
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 29/179 (16%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL- 180
S C L+R ++ P T +RAPE+L + + A+D+WS G IF LL
Sbjct: 189 SQNKCSICLSRRQQVAPRAG------TPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 181 GRRILFQAQSPVQQLGLITDLLGTPT-------------------PEEMRHACD---GAK 218
GR ++A + L I + G+ +++R C+ G
Sbjct: 243 GRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMD 302
Query: 219 CHMLRQTRKXXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRL 277
+ T EA LL ++L +P RI+ AL HP+ + L
Sbjct: 303 SSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMSL 361
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
FK+LK +H I+HRD+KP N L N
Sbjct: 127 FKALKRIHQFGIVHRDVKPSNFLYN 151
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + D N T + Y APE++ G + VDVWS G I +L RR
Sbjct: 143 KIADFGLSNIMT-DGNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
Query: 184 ILFQAQS 190
+ F +S
Sbjct: 201 LPFDDES 207
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H +I+HRD+KP NLL++ + +K
Sbjct: 115 AVEYCHRHKIVHRDLKPENLLLDEHLNVK 143
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 33/150 (22%)
Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG A++ + P + V T Y+ APE++ Y+ VD+WS+G + E++
Sbjct: 181 KLSDFGFCAQISKDVPKRKXL--VGTPYWMAPEVI-SRSLYATEVDIWSLGIMVIEMVDG 237
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
+ + SPVQ + + D +P P+ L+ + K
Sbjct: 238 EPPYFSDSPVQAMKRLRD---SPPPK-------------LKNSHKVSPVLR--------- 272
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
L +ML DP +R + L HP+L
Sbjct: 273 ----DFLERMLVRDPQERATAQELLDHPFL 298
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 362 AAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A ++L YLH+ ++HRDIK ++L+ + +K
Sbjct: 149 AVLQALAYLHAQGVIHRDIKSDSILLTLDGRVK 181
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S K+ DFG P+ +K T V T Y+ APE++ + Y VD+WS+G + E++
Sbjct: 155 SVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIE 212
Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
+ ++P++ L LI GTP PE++
Sbjct: 213 GEPPYLNENPLRALYLIAT-NGTPELQNPEKL 243
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++L++LHS +++HR+IK N+L+ + +K
Sbjct: 127 LQALEFLHSNQVIHRNIKSDNILLGMDGSVK 157
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 124 KICDFGLARVEE-------------PDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
KI DFGLA+ P + +T + T Y A E+L G HY+ +D +
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXY 215
Query: 171 SVGCIFAELL 180
S+G IF E +
Sbjct: 216 SLGIIFFEXI 225
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
++L Y+HS I+HR++KP N+ ++
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFID 150
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + D N T + Y APE++ G + VDVWS G I +L RR
Sbjct: 153 KIADFGLSNIM-TDGNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
Query: 184 ILFQAQS 190
+ F +S
Sbjct: 211 LPFDDES 217
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H +I+HRD+KP NLL++ + +K
Sbjct: 125 AVEYCHRHKIVHRDLKPENLLLDEHLNVK 153
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + D N T + Y APE++ G + VDVWS G I +L RR
Sbjct: 147 KIADFGLSNIMT-DGNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
Query: 184 ILFQAQS 190
+ F +S
Sbjct: 205 LPFDDES 211
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H +I+HRD+KP NLL++ + +K
Sbjct: 119 AVEYCHRHKIVHRDLKPENLLLDEHLNVK 147
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + D N T + Y APE++ G + VDVWS G I +L RR
Sbjct: 152 KIADFGLSNIM-TDGNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
Query: 184 ILFQAQS 190
+ F +S
Sbjct: 210 LPFDDES 216
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H +I+HRD+KP NLL++ + +K
Sbjct: 124 AVEYCHRHKIVHRDLKPENLLLDEHLNVK 152
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 31/158 (19%)
Query: 139 NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS------PV 192
+K T+++ T+ YR+ E+L+GA YS D+WS C+ EL LF+ S
Sbjct: 239 HKHFTEDIQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDE 297
Query: 193 QQLGLITDLLGTPTPE-----------------EMRHACDGAKCHMLRQTRKXXXXXXXX 235
+ I +LLG+ P E+RH L+
Sbjct: 298 DHIAHIIELLGS-IPRHFALSGKYSREFFNRRGELRHITK------LKPWSLFDVLVEKY 350
Query: 236 XXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD 273
+ L+ ML P KR S L HP+L+
Sbjct: 351 GWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 388
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 363 AFKSLKYLHSA-RILHRDIKPGNLLV 387
+ L YLHS +I+H DIKP N+L+
Sbjct: 149 VLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVG 173
++ +++KI DFGLAR E M +V T Y APE L G + D++S G
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--EITPKSDIYSFG 221
Query: 174 CIFAELL 180
+ E++
Sbjct: 222 VVLLEII 228
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVG 173
++ +++KI DFGLAR E M +V T Y APE L G + D++S G
Sbjct: 158 ILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--EITPKSDIYSFG 215
Query: 174 CIFAELL 180
+ E++
Sbjct: 216 VVLLEII 222
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI D G A +K T+++ T+ YR+ E+L+G+ Y+ D+WS C+ EL
Sbjct: 236 KIADLGNACW----VHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGD 290
Query: 184 ILFQAQSPVQ------QLGLITDLLG 203
LF+ S + + LI +LLG
Sbjct: 291 YLFEPHSGEEYTRDEDHIALIIELLG 316
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 363 AFKSLKYLHSA-RILHRDIKPGNLLVNSN 390
+ L YLH+ RI+H DIKP N+L++ N
Sbjct: 155 VLQGLDYLHTKCRIIHTDIKPENILLSVN 183
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + ++V+ T Y APE+L H S VDVWS+GCI LL
Sbjct: 181 KIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 235
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 368 KYLHSARILHRDIKPGNLLVNSNCILK 394
+YLH R++HRD+K GNL +N + +K
Sbjct: 155 QYLHRNRVIHRDLKLGNLFLNEDLEVK 181
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + ++V+ T Y APE+L H S VDVWS+GCI LL
Sbjct: 179 KIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 233
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 368 KYLHSARILHRDIKPGNLLVNSNCILK 394
+YLH R++HRD+K GNL +N + +K
Sbjct: 153 QYLHRNRVIHRDLKLGNLFLNEDLEVK 179
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + ++V+ T Y APE+L H S VDVWS+GCI LL
Sbjct: 155 KIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 209
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 368 KYLHSARILHRDIKPGNLLVNSNCILK 394
+YLH R++HRD+K GNL +N + +K
Sbjct: 129 QYLHRNRVIHRDLKLGNLFLNEDLEVK 155
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI D G A +K T+++ T+ YR+ E+L+G+ Y+ D+WS C+ EL
Sbjct: 220 KIADLGNACW----VHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGD 274
Query: 184 ILFQAQSPVQ------QLGLITDLLG 203
LF+ S + + LI +LLG
Sbjct: 275 YLFEPHSGEEYTRDEDHIALIIELLG 300
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 363 AFKSLKYLHSA-RILHRDIKPGNLLVNSN 390
+ L YLH+ RI+H DIKP N+L++ N
Sbjct: 139 VLQGLDYLHTKCRIIHTDIKPENILLSVN 167
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + T T Y APE+L H S VD+WS+GCI LL
Sbjct: 182 KIGDFGLATKIEFDGERKKTL-CGTPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLL 236
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YLH+ R++HRD+K GNL +N + +K
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVK 182
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S K+ DFG P+ +K ++ V T Y+ APE++ + Y VD+WS+G + E++
Sbjct: 154 SVKLTDFGFCAQITPEQSKR-SEMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIE 211
Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
+ ++P++ L LI GTP PE++
Sbjct: 212 GEPPYLNENPLRALYLIAT-NGTPELQNPEKL 242
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++L++LHS +++HRDIK N+L+ + +K
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGSVK 156
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG A+ E + ++T T YY APE+L G Y + D WS+G I LL
Sbjct: 204 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDXWSLGVIXYILL 257
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ SN LK
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLGSNGELK 152
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L
Sbjct: 152 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGM 207
Query: 184 ILFQAQS 190
F+A +
Sbjct: 208 PPFEAHT 214
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ SN LK
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLGSNGELK 152
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
L+YLHS I+H+DIKPGNLL+ + LK
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLTTGGTLK 149
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 16/72 (22%)
Query: 125 ICDFGLARV--------------EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
+ DFGLAR+ ++PD K T V Y+ APE++ G R Y VDV+
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV-VGNPYWMAPEMING-RSYDEKVDVF 206
Query: 171 SVGCIFAELLGR 182
S G + E++GR
Sbjct: 207 SFGIVLCEIIGR 218
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+ YLHS I+HRD+ N LV N
Sbjct: 120 GMAYLHSMNIIHRDLNSHNCLVREN 144
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 61/160 (38%), Gaps = 31/160 (19%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA +E +A T Y +PE+L Y VD+W+ G I LL
Sbjct: 164 KLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILL--- 218
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+G P + H L Q K T
Sbjct: 219 ------------------VGYPPFWDEDQ-------HRLYQQIKAGAYDFPSPEWDTVTP 253
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCM 283
EA L+ +ML +P+KRI+ AL HP++ R SCM
Sbjct: 254 EAKDLINKMLTINPSKRITAAEALKHPWISH-RSTVASCM 292
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
+I DFGL+ E +K ++ T YY APE+L G Y DVWS G I LL
Sbjct: 169 RIIDFGLSTHFEA--SKKXKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILL 221
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNC 391
+ Y H +I+HRD+KP NLL+ S
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKS 163
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 61/160 (38%), Gaps = 31/160 (19%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA +E +A T Y +PE+L Y VD+W+ G I LL
Sbjct: 153 KLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILL--- 207
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+G P + H L Q K T
Sbjct: 208 ------------------VGYPPFWDEDQ-------HRLYQQIKAGAYDFPSPEWDTVTP 242
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCM 283
EA L+ +ML +P+KRI+ AL HP++ R SCM
Sbjct: 243 EAKDLINKMLTINPSKRITAAEALKHPWISH-RSTVASCM 281
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 59/151 (39%), Gaps = 27/151 (17%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S +ICDFG A+ + N + T + APE+L + Y AA D+WS+G + L
Sbjct: 158 SIRICDFGFAKQLRAE-NGLLXTPCYTANFVAPEVLE-RQGYDAACDIWSLGVLLYTXLT 215
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
F A P TPEE+ K +
Sbjct: 216 GYTPF-ANGP------------DDTPEEILARIGSGKFSL------------SGGYWNSV 250
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ A L+ + L+ DP +R++ L HP++
Sbjct: 251 SDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 365 KSLKYLHSARILHRDIKPGNLL 386
K+++YLH+ ++HRD+KP N+L
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNIL 148
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S K+ DFG P+ +K + V T Y+ APE++ + Y VD+WS+G + E++
Sbjct: 154 SVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIE 211
Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
+ ++P++ L LI GTP PE++
Sbjct: 212 GEPPYLNENPLRALYLIAT-NGTPELQNPEKL 242
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++L++LHS +++HRDIK N+L+ + +K
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGMDGSVK 156
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S K+ DFG P+ +K + V T Y+ APE++ + Y VD+WS+G + E++
Sbjct: 155 SVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIE 212
Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
+ ++P++ L LI GTP PE++
Sbjct: 213 GEPPYLNENPLRALYLIAT-NGTPELQNPEKL 243
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++L++LHS +++HRDIK N+L+ + +K
Sbjct: 127 LQALEFLHSNQVIHRDIKSDNILLGMDGSVK 157
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 60/153 (39%), Gaps = 37/153 (24%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
KI DFG+ + E A T E T Y APEIL+G + Y+ +VD WS G + E+L
Sbjct: 159 KIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEML-- 213
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
QSP EE+ H+ R K
Sbjct: 214 ----IGQSPFH----------GQDEEELFHSIRMDNPFYPRWLEK--------------- 244
Query: 243 GEAVHLLVQMLYFDPTKRISVNSAL-CHPYLDE 274
EA LLV++ +P KR+ V + HP E
Sbjct: 245 -EAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + S + D+W++GCI +L+
Sbjct: 172 QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-EKSASKSSDLWALGCIIYQLVAG 230
Query: 183 RILFQA 188
F+A
Sbjct: 231 LPPFRA 236
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNED 168
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 112 RQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDV 169
L+ Y SKI DFGL+++E M+ T Y APE+L + YS AVD
Sbjct: 149 ENLLYYSQDEESKIMISDFGLSKME--GKGDVMSTACGTPGYVAPEVL-AQKPYSKAVDC 205
Query: 170 WSVGCIFAELL 180
WS+G I LL
Sbjct: 206 WSIGVIAYILL 216
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 369 YLHSARILHRDIKPGNLLVNS 389
YLH I+HRD+KP NLL S
Sbjct: 135 YLHRMGIVHRDLKPENLLYYS 155
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 57/151 (37%), Gaps = 31/151 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ FG+A ++ + V T ++ APE++ Y VDVW G I LL
Sbjct: 175 KLGGFGVA-IQLGESGLVAGGRVGTPHFMAPEVVK-REPYGKPVDVWGCGVILFILLSGC 232
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+ F G+I P + H + AK
Sbjct: 233 LPFYGTKERLFEGIIKGKYKM-NPRQWSHISESAK------------------------- 266
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
L+ +ML DP +RI+V AL HP+L E
Sbjct: 267 ---DLVRRMLMLDPAERITVYEALNHPWLKE 294
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
++L+Y H I+HRD+KP +L+ S
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASK 168
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 30/149 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA +E +A T Y +PE+L Y VD+W+ G I LL
Sbjct: 146 KLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDMWACGVILYILL--- 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+G P + H L Q K T
Sbjct: 201 ------------------VGYPPFWDEDQ-------HRLYQQIKAGAYDFPSPEWDTVTP 235
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
EA L+ +ML +P KRI+ + AL HP++
Sbjct: 236 EAKDLINKMLTINPAKRITASEALKHPWI 264
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNS 389
+S+ + H I+HRD+KP NLL+ S
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLAS 138
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + T Y APE+L H S VD+WS+GCI LL
Sbjct: 166 KIGDFGLATKIEFDGERK-KDLCGTPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLL 220
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YLH+ R++HRD+K GNL +N + +K
Sbjct: 135 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVK 166
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 244
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 30/149 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA +E +A T Y +PE+L Y VD+W+ G I LL
Sbjct: 146 KLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDMWACGVILYILL--- 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+G P + H L Q K T
Sbjct: 201 ------------------VGYPPFWDEDQ-------HRLYQQIKAGAYDFPSPEWDTVTP 235
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
EA L+ +ML +P KRI+ + AL HP++
Sbjct: 236 EAKDLINKMLTINPAKRITASEALKHPWI 264
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNS 389
+S+ + H I+HRD+KP NLL+ S
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLAS 138
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 57/151 (37%), Gaps = 31/151 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ FG+A ++ + V T ++ APE++ Y VDVW G I LL
Sbjct: 173 KLGGFGVA-IQLGESGLVAGGRVGTPHFMAPEVVK-REPYGKPVDVWGCGVILFILLSGC 230
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
+ F G+I P + H + AK
Sbjct: 231 LPFYGTKERLFEGIIKGKYKM-NPRQWSHISESAK------------------------- 264
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
L+ +ML DP +RI+V AL HP+L E
Sbjct: 265 ---DLVRRMLMLDPAERITVYEALNHPWLKE 292
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
++L+Y H I+HRD+KP +L+ S
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASK 166
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 179 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 235
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + T Y APE+L H S VD+WS+GCI LL
Sbjct: 182 KIGDFGLATKIEFDGERK-KDLCGTPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLL 236
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YLH+ R++HRD+K GNL +N + +K
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVK 182
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVG 173
++ +++KI DFGLAR E +V T Y APE L G + D++S G
Sbjct: 155 ILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG--EITPKSDIYSFG 212
Query: 174 CIFAELL 180
+ E++
Sbjct: 213 VVLLEII 219
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 244
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 179 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 235
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
Query: 354 PLCINPQSAAF------KSLKYLHSARILHRDIKPGNLLVNS 389
PL N Q+ F + LKYLH +I+HRDIK N+L+N+
Sbjct: 116 PLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 157
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 120 TYSS--KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL-MGARHYSAAVDVWSVGCIF 176
TYS KI DFG ++ N T Y APEI+ G R Y A D+WS+GC
Sbjct: 157 TYSGVLKISDFGTSK-RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTI 215
Query: 177 AEL 179
E+
Sbjct: 216 IEM 218
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 188 KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 244
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 33/150 (22%)
Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG A+V + P + V T Y+ APE L+ Y VD+WS+G + E++
Sbjct: 287 KLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDG 343
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
+ + P++ + +I D L P +++ H + + K
Sbjct: 344 EPPYFNEPPLKAMKMIRDNL----PPRLKN------LHKVSPSLKG-------------- 379
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
L ++L DP +R + L HP+L
Sbjct: 380 -----FLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
Query: 354 PLCINPQSAAF------KSLKYLHSARILHRDIKPGNLLVNS 389
PL N Q+ F + LKYLH +I+HRDIK N+L+N+
Sbjct: 102 PLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 143
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 120 TYSS--KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL-MGARHYSAAVDVWSVGCIF 176
TYS KI DFG ++ N T Y APEI+ G R Y A D+WS+GC
Sbjct: 143 TYSGVLKISDFGTSK-RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTI 201
Query: 177 AEL 179
E+
Sbjct: 202 IEM 204
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K ++YLH +I+HRDIKP NLLV + +K
Sbjct: 147 IKGIEYLHYQKIIHRDIKPSNLLVGEDGHIK 177
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA E D + T Y APE+L H S VD+WS+GCI LL
Sbjct: 182 KIGDFGLATKIEFDGERKKXL-CGTPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLL 236
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YLH+ R++HRD+K GNL +N + +K
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVK 182
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + KI DFG + E + + + Y APE+ G ++ VDVWS+G
Sbjct: 144 LLLDADMNIKIADFGFSN--EFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 202 ILYTLVSGSLPFDGQN 217
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H I+HRD+K NLL++++ +K
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIK 153
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 65/169 (38%), Gaps = 34/169 (20%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHY 163
G R T ++ + KI DFGLA + P++ T Y +PEI + H
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLA-TQLKMPHEKHYTLCGTPNYISPEIATRSAH- 189
Query: 164 SAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR 223
DVWS+GC+F LL R F + L + L P +
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV-LADYEMPSFL------------- 235
Query: 224 QTRKXXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA L+ Q+L +P R+S++S L HP++
Sbjct: 236 ------------------SIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLHS ILHRD+ NLL+ N +K
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIK 152
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ A ++KI DFGL+ + + + + Y APE++ G + VD+WS G
Sbjct: 147 VLLDAHMNAKIADFGLSNMMSD--GEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGV 204
Query: 175 IFAELL 180
I LL
Sbjct: 205 ILYALL 210
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 188 KICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 244
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
L++ KICDFG A D MT + + APE+ G+ +YS DV+S
Sbjct: 136 NLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEGS-NYSEKCDVFSW 190
Query: 173 GCIFAELLGRRILF 186
G I E++ RR F
Sbjct: 191 GIILWEVITRRKPF 204
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
L++ KICDFG A D MT + + APE+ G+ +YS DV+S
Sbjct: 135 NLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEGS-NYSEKCDVFSW 189
Query: 173 GCIFAELLGRRILF 186
G I E++ RR F
Sbjct: 190 GIILWEVITRRKPF 203
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 362 AAFKSLKYLHSARILHRDIKPGNLLVNS 389
+ K L+YLH R +HRDIK GN+L+N+
Sbjct: 133 STLKGLEYLHFMRKIHRDIKAGNILLNT 160
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 84 RRKPFKLSEISATRPDSTIDGYQARQPTRQL--------VMYQATYSSKICDFGLARVEE 135
R K EI AT ST+ G + R++ ++ +K+ DFG+A +
Sbjct: 118 RNKTLTEDEI-ATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAG-QL 175
Query: 136 PDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
D + T ++ APE++ Y+ D+WS+G E+
Sbjct: 176 TDXMAKRNXVIGTPFWMAPEVIQEI-GYNCVADIWSLGITAIEM 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ A ++KI DFGL+ + + + + Y APE++ G + VD+WS G
Sbjct: 142 VLLDAHMNAKIADFGLSNMMSD--GEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 175 IFAELL 180
I LL
Sbjct: 200 ILYALL 205
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+I D GLA V P+ + + V T Y APE++ R Y+ + D W++GC+ E++
Sbjct: 326 RISDLGLA-VHVPE-GQTIKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIA-- 380
Query: 184 ILFQAQSPVQQ 194
QSP QQ
Sbjct: 381 ----GQSPFQQ 387
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
L+ LH RI++RD+KP N+L++ +
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDH 322
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
+I D GLA V P+ + + V T Y APE++ R Y+ + D W++GC+ E++
Sbjct: 326 RISDLGLA-VHVPE-GQTIKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIA-- 380
Query: 184 ILFQAQSPVQQ 194
QSP QQ
Sbjct: 381 ----GQSPFQQ 387
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
L+ LH RI++RD+KP N+L++ +
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDH 322
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 184 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 240
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 179 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 179 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 235
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 188 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 244
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 190 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 246
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL-LGR 182
K+CDFG V + V T+ Y +PE L G HYS D+WS+G E+ +GR
Sbjct: 164 KLCDFG---VSGQLIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGR 219
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPE 208
+ + L+ ++ P P+
Sbjct: 220 YPIGSGSGSMAIFELLDYIVNEPPPK 245
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
A K L YL +I+HRD+KP N+LVNS +K
Sbjct: 131 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 164
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 33/150 (22%)
Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG A+V + P + V T Y+ APE L+ Y VD+WS+G + E++
Sbjct: 210 KLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDG 266
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
+ + P++ + +I D L P +++ H + + K
Sbjct: 267 EPPYFNEPPLKAMKMIRDNL----PPRLKN------LHKVSPSLKG-------------- 302
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
L ++L DP +R + L HP+L
Sbjct: 303 -----FLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 231 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 287
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 327 ERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLL 386
E+ L+ V++ EE + + + T +C + Q A K +++L S + +HRD+ N+L
Sbjct: 168 EKSLSDVEE--EEAPEDLYKDFLTLEHLICYSFQVA--KGMEFLASRKCIHRDLAARNIL 223
Query: 387 VNSNCILK 394
++ ++K
Sbjct: 224 LSEKNVVK 231
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFGLA P K M +V T YY +P++L G Y D WS G + LL
Sbjct: 166 KLIDFGLA--ARFKPGKMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLL 218
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 281
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 233 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 289
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 327 ERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLL 386
E+ L+ V++ EE + + + T +C + Q A K +++L S + +HRD+ N+L
Sbjct: 170 EKSLSDVEE--EEAPEDLYKDFLTLEHLICYSFQVA--KGMEFLASRKCIHRDLAARNIL 225
Query: 387 VNSNCILK 394
++ ++K
Sbjct: 226 LSEKNVVK 233
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ A ++KI DFGL+ + + + + Y APE++ G + VD+WS G
Sbjct: 142 VLLDAHMNAKIADFGLSNMMSD--GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 175 IFAELL 180
I LL
Sbjct: 200 ILYALL 205
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 238 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 294
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 327 ERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLL 386
E+ L+ V++ EE + + + T +C + Q A K +++L S + +HRD+ N+L
Sbjct: 175 EKSLSDVEE--EEAPEDLYKDFLTLEHLICYSFQVA--KGMEFLASRKCIHRDLAARNIL 230
Query: 387 VNSNCILK 394
++ ++K
Sbjct: 231 LSEKNVVK 238
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 240 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 296
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 327 ERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLL 386
E+ L+ V++ EE + + + T +C + Q A K +++L S + +HRD+ N+L
Sbjct: 177 EKSLSDVEE--EEAPEDLYKDFLTLEHLICYSFQVA--KGMEFLASRKCIHRDLAARNIL 232
Query: 387 VNSNCILK 394
++ ++K
Sbjct: 233 LSEKNVVK 240
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELK 153
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 153 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 208
Query: 184 ILFQAQS 190
F+A +
Sbjct: 209 PPFEANT 215
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGL++ E D K T Y APE++ R ++ + D WS G + E+L
Sbjct: 166 KLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGT 223
Query: 184 ILFQAQSPVQQLGLITDL-LGTP 205
+ FQ + + + +I LG P
Sbjct: 224 LPFQGKDRKETMTMILKAKLGMP 246
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L +LHS I++RD+KP N+L++ +K
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIK 166
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
++ DFG+ARV A + T YY +PEI + Y+ D+W++GC+ EL +
Sbjct: 165 QLGDFGIARVLNSTVELARAC-IGTPYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLK 222
Query: 184 ILFQAQS 190
F+A S
Sbjct: 223 HAFEAGS 229
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+LK++H +ILHRDIK N+ + +
Sbjct: 137 ALKHVHDRKILHRDIKSQNIFLTKD 161
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELK 174
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 174 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 229
Query: 184 ILFQAQS 190
F+A +
Sbjct: 230 PPFEANT 236
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELK 153
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + + Y PE++ G R + VD+WS+G + E L +
Sbjct: 153 KIADFGWS-VHAPSSRRXXLXGTLD--YLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 208
Query: 184 ILFQAQS 190
F+A +
Sbjct: 209 PPFEANT 215
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFGLA P K M +V T YY +P++L G Y D WS G + LL
Sbjct: 149 KLIDFGLA--ARFKPGKMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLL 201
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELK 174
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T Y PE++ G R + VD+WS+G + E L +
Sbjct: 174 KIADFGWS-VHAPSSRR--DDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 229
Query: 184 ILFQAQS 190
F+A +
Sbjct: 230 PPFEANT 236
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLLGSAGELK 165
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 165 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 220
Query: 184 ILFQAQS 190
F+A +
Sbjct: 221 PPFEANT 227
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELK 151
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P +A T Y PE++ G R + VD+WS+G + E L +
Sbjct: 151 KIADFGWS-VHAPSSRRAAL--CGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 184 ILFQAQS 190
F+A +
Sbjct: 207 PPFEANT 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELK 149
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + P+ T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 149 KIADFGWSC---HAPSSRRTTLSGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 204
Query: 184 ILFQAQS 190
F+A +
Sbjct: 205 PPFEANT 211
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGL++ E D K T Y APE++ R ++ + D WS G + E+L
Sbjct: 166 KLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGT 223
Query: 184 ILFQAQSPVQQLGLITDL-LGTP 205
+ FQ + + + +I LG P
Sbjct: 224 LPFQGKDRKETMTMILKAKLGMP 246
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L +LHS I++RD+KP N+L++ +K
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIK 166
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELK 153
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 153 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 208
Query: 184 ILFQAQS 190
F+A +
Sbjct: 209 PPFEANT 215
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELK 151
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 151 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 184 ILFQAQS 190
F+A +
Sbjct: 207 PPFEANT 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELK 151
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 151 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 184 ILFQAQS 190
F+A +
Sbjct: 207 PPFEANT 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 124 KICDFGLAR--VEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAEL- 179
K+CDFG++ ++E M E V T+ Y +PE L G HYS D+WS+G E+
Sbjct: 148 KLCDFGVSGQLIDE------MANEFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMA 200
Query: 180 LGR 182
+GR
Sbjct: 201 VGR 203
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
A K L YL +I+HRD+KP N+LVNS +K
Sbjct: 115 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 148
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELK 153
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE + G R + VD+WS+G + E L +
Sbjct: 153 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEXIEG-RXHDEKVDLWSLGVLCYEFLVGK 208
Query: 184 ILFQAQS 190
F+A +
Sbjct: 209 PPFEANT 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + KI DFG + E + + Y APE+ G ++ VDVWS+G
Sbjct: 144 LLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 202 ILYTLVSGSLPFDGQN 217
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H I+HRD+K NLL++++ +K
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIK 153
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGL++ E D K T Y APE++ R ++ + D WS G + E+L
Sbjct: 167 KLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGT 224
Query: 184 ILFQAQSPVQQLGLITDL-LGTP 205
+ FQ + + + +I LG P
Sbjct: 225 LPFQGKDRKETMTMILKAKLGMP 247
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L +LHS I++RD+KP N+L++ +K
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLDEEGHIK 167
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELK 148
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T+ T Y PE++ G R + VD+WS+G + E L +
Sbjct: 148 KIADFGWS-VHAPSSRR--TELCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 184 ILFQAQS 190
F+A +
Sbjct: 204 PPFEANT 210
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 88 FKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVV 147
F L+EIS G R + +M K+ DFGL + D T
Sbjct: 125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF-CG 183
Query: 148 TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
T Y APEILM + H + AVD WS+G + ++L
Sbjct: 184 TIEYMAPEILMRSGH-NRAVDWWSLGALMYDML 215
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+L +LH I++RD+KP N+++N
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLN 155
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELK 148
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P +A T Y PE++ G R + VD+WS+G + E L +
Sbjct: 148 KIADFGWS-VHAPSSRRAAL--CGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 184 ILFQAQS 190
F+A +
Sbjct: 204 PPFEANT 210
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + KI DFG + E + + Y APE+ G ++ VDVWS+G
Sbjct: 144 LLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 202 ILYTLVSGSLPFDGQN 217
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H I+HRD+K NLL++++ +K
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIK 153
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
K+ DFGLA RV K T + T Y APEI++ ++ Y+ AVD W++G + E+
Sbjct: 181 KVTDFGLAKRV------KGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAA 233
Query: 182 RRILFQAQSPVQ 193
F A P+Q
Sbjct: 234 GYPPFFADQPIQ 245
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NL+++ +K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIK 181
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL--MGARHYSAAVDVWSVGCIFAELLG 181
K+ DFG A + P V T Y+ APE++ M Y VDVWS+G EL
Sbjct: 194 KLGDFGSASIMAP-----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248
Query: 182 RR 183
R+
Sbjct: 249 RK 250
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 362 AAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A + L YLHS ++HRD+K GN+L++ ++K
Sbjct: 162 GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK 194
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELK 150
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI +FG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 150 KIANFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 205
Query: 184 ILFQAQS 190
F+A +
Sbjct: 206 PPFEANT 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELK 152
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 152 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 207
Query: 184 ILFQAQS 190
F+A +
Sbjct: 208 PPFEANT 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELK 148
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 148 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 184 ILFQAQS 190
F+A +
Sbjct: 204 PPFEANT 210
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + KI DFG + E + + Y APE+ G ++ VDVWS+G
Sbjct: 144 LLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 202 ILYTLVSGSLPFDGQN 217
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H I+HRD+K NLL++++ +K
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIK 153
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELK 150
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T Y PE++ G R + VD+WS+G + E L +
Sbjct: 150 KIADFGWS-VHAPSSRRXXL--CGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 205
Query: 184 ILFQAQS 190
F+A +
Sbjct: 206 PPFEANT 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELK 147
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 147 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 202
Query: 184 ILFQAQS 190
F+A +
Sbjct: 203 PPFEANT 209
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 172 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSAXKSSDLWALGCIIYQLVAG 230
Query: 183 RILFQA 188
F+A
Sbjct: 231 LPPFRA 236
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNED 168
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELK 148
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 148 KIADFGWS-VHAPSSRR--TXLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 184 ILFQAQS 190
F+A +
Sbjct: 204 PPFEANT 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG A+V + P + V T Y+ APE L+ Y VD+WS+G + E++
Sbjct: 165 KLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDG 221
Query: 183 RILFQAQSPVQQLGLITDLL 202
+ + P++ + +I D L
Sbjct: 222 EPPYFNEPPLKAMKMIRDNL 241
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGL++ E D K T Y APE++ H S + D WS G + E+L
Sbjct: 170 KLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGS 227
Query: 184 ILFQAQSPVQQLGLITDL-LGTP 205
+ FQ + + + LI LG P
Sbjct: 228 LPFQGKDRKETMTLILKAKLGMP 250
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
L +LHS I++RD+KP N+L++ +K
Sbjct: 142 GLDHLHSLGIIYRDLKPENILLDEEGHIK 170
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ + K+CDFG V + V T+ Y APE L G HYS D+WS+G
Sbjct: 146 ILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMAPERLQGT-HYSVQSDIWSMGL 201
Query: 175 IFAEL-LGR 182
EL +GR
Sbjct: 202 SLVELAVGR 210
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 332 SVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSA-RILHRDIKPGNLLVNSN 390
S+ QV +E + E L + A + L YL +I+HRD+KP N+LVNS
Sbjct: 100 SLDQVLKEAKRIPEEILGKVSI--------AVLRGLAYLREKHQIMHRDVKPSNILVNSR 151
Query: 391 CILK 394
+K
Sbjct: 152 GEIK 155
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELK 149
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T Y PE++ G R + VD+WS+G + E L +
Sbjct: 149 KIADFGWS-VHAPSSRRDTL--CGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 204
Query: 184 ILFQAQS 190
F+A +
Sbjct: 205 PPFEANT 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELK 148
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 148 KIADFGWS-VHAPSSRR--TDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 184 ILFQAQS 190
F+A +
Sbjct: 204 PPFEANT 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGELK 145
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 145 KIADFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 200
Query: 184 ILFQAQS 190
F+A +
Sbjct: 201 PPFEANT 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELK 149
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 149 KIADFGWS-VHAPSSRR--TDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 204
Query: 184 ILFQAQS 190
F+A +
Sbjct: 205 PPFEANT 211
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 59/153 (38%), Gaps = 37/153 (24%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
KI DFG+ + E A T T Y APEIL+G + Y+ +VD WS G + E+L
Sbjct: 158 KIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEML-- 212
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
QSP EE+ H+ R K
Sbjct: 213 ----IGQSPFH----------GQDEEELFHSIRMDNPFYPRWLEK--------------- 243
Query: 243 GEAVHLLVQMLYFDPTKRISVNSAL-CHPYLDE 274
EA LLV++ +P KR+ V + HP E
Sbjct: 244 -EAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELK 153
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 153 KIADFGWS-VHAPSSRR--TDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 208
Query: 184 ILFQAQS 190
F+A +
Sbjct: 209 PPFEANT 215
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELK 151
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T Y PE++ G R + VD+WS+G + E L +
Sbjct: 151 KIADFGWS-VHAPSSRR--DDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 184 ILFQAQS 190
F+A +
Sbjct: 207 PPFEANT 213
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELK 151
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T Y PE++ G R + VD+WS+G + E L +
Sbjct: 151 KIADFGWS-VHAPSSRRXXL--CGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 184 ILFQAQS 190
F+A +
Sbjct: 207 PPFEANT 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + KI DFG + E + + Y APE+ G ++ VDVWS+G
Sbjct: 142 LLLDADMNIKIADFGFSN--EFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 200 ILYTLVSGSLPFDGQN 215
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H RI+HRD+K NLL++++ +K
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDADMNIK 151
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG A+V + P + V T Y+ APE L+ Y VD+WS+G + E++
Sbjct: 167 KLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDG 223
Query: 183 RILFQAQSPVQQLGLITDLL 202
+ + P++ + +I D L
Sbjct: 224 EPPYFNEPPLKAMKMIRDNL 243
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELK 151
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI +FG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 151 KIANFGWS-VHAPSSRR--TTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 206
Query: 184 ILFQAQS 190
F+A +
Sbjct: 207 PPFEANT 213
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELK 148
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T Y PE++ G R + VD+WS+G + E L +
Sbjct: 148 KIADFGWS-VHAPSSRRXXL--CGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 184 ILFQAQS 190
F+A +
Sbjct: 204 PPFEANT 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + KI DFG + E + + Y APE+ G ++ VDVWS+G
Sbjct: 137 LLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 194
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 195 ILYTLVSGSLPFDGQN 210
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H I+HRD+K NLL++++ +K
Sbjct: 118 AVQYCHQKFIVHRDLKAENLLLDADMNIK 146
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS R++HRDIKP NLL+ S LK
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELK 148
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P + T T Y PE++ G R + VD+WS+G + E L +
Sbjct: 148 KIADFGWS-VHAPSSRR--TDLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 184 ILFQAQS 190
F+A +
Sbjct: 204 PPFEANT 210
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG A+V + P + V T Y+ APE++ Y VD+WS+G + E++
Sbjct: 181 KLSDFGFCAQVSKEVPKRKXL--VGTPYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMIDG 237
Query: 183 RILFQAQSPVQQLGLITDLL 202
+ + P+Q + I D L
Sbjct: 238 EPPYFNEPPLQAMRRIRDSL 257
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 362 AAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++L YLH+ ++HRDIK ++L+ S+ +K
Sbjct: 149 SVLRALSYLHNQGVIHRDIKSDSILLTSDGRIK 181
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL--MGARHYSAAVDVWSVGCIFAELLG 181
K+ DFG A + P V T Y+ APE++ M Y VDVWS+G EL
Sbjct: 155 KLGDFGSASIMAP-----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209
Query: 182 RR 183
R+
Sbjct: 210 RK 211
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 362 AAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
A + L YLHS ++HRD+K GN+L++ ++K
Sbjct: 123 GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK 155
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 88 FKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVV 147
F L+EIS G R + +M K+ DFGL + E + +T
Sbjct: 125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFC 182
Query: 148 -TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
T Y APEILM + H + AVD WS+G + ++L
Sbjct: 183 GTIEYMAPEILMRSGH-NRAVDWWSLGALMYDML 215
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+L +LH I++RD+KP N+++N
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLN 155
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG A+V + P + V T Y+ APE L+ Y VD+WS+G + E++
Sbjct: 156 KLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDG 212
Query: 183 RILFQAQSPVQQLGLITDLL 202
+ + P++ + +I D L
Sbjct: 213 EPPYFNEPPLKAMKMIRDNL 232
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM--GARHYSAAVDVWSVGCIFAELLG 181
KI DFG +++ M T Y APE+L+ G Y+ AVD WS+G I
Sbjct: 282 KITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI------ 333
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
L L G P E R L+
Sbjct: 334 ---------------LFICLSGYPPFSEHRTQVS------LKDQITSGKYNFIPEVWAEV 372
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
+ +A+ L+ ++L DP R + AL HP+L + ++
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 409
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS---NCILK 394
+++YLH I+HRD+KP N+L++S +C++K
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 282
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG A+V + P + V T Y+ APE L+ Y VD+WS+G + E++
Sbjct: 160 KLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDG 216
Query: 183 RILFQAQSPVQQLGLITDLL 202
+ + P++ + +I D L
Sbjct: 217 EPPYFNEPPLKAMKMIRDNL 236
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 334 QQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN 390
+ + +H F R L N F +L YLH+ I HRDIKP N L ++N
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN 204
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNK---AMTQEVVTQYYRAPEILMGARH-YS 164
+P L ++ K+ DFGL++ N MT + T Y+ APE+L Y
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG 254
Query: 165 AAVDVWSVGCIFAELL 180
D WS G + LL
Sbjct: 255 PKCDAWSAGVLLHLLL 270
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + KI DFG + E + Y APE+ G ++ VDVWS+G
Sbjct: 144 LLLDADXNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 202 ILYTLVSGSLPFDGQN 217
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H I+HRD+K NLL++++ +K
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADXNIK 153
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHY 163
Y+ +P L+ Q ++ DFG A RV+ A T E Y APEI++ ++ Y
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRVKGRTWXLAGTPE-----YLAPEIIL-SKGY 215
Query: 164 SAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
+ AVD W++G + E+ F A P+Q
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 173 QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 231
Query: 183 RILFQA 188
F+A
Sbjct: 232 LPPFRA 237
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNED 169
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM--GARHYSAAVDVWSVGCIFAELLG 181
KI DFG +++ M T Y APE+L+ G Y+ AVD WS+G I
Sbjct: 296 KITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI------ 347
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
L L G P E R L+
Sbjct: 348 ---------------LFICLSGYPPFSEHRTQVS------LKDQITSGKYNFIPEVWAEV 386
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
+ +A+ L+ ++L DP R + AL HP+L + ++
Sbjct: 387 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 423
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS---NCILK 394
+++YLH I+HRD+KP N+L++S +C++K
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 296
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 150 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 208
Query: 183 RILFQA 188
F+A
Sbjct: 209 LPPFRA 214
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 122 ALEYLHGKGIIHRDLKPENILLNED 146
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGL+++ E ++ + + V T Y APEIL G Y VD+WSVG I LL
Sbjct: 191 KIADFGLSKIVE---HQVLMKTVCGTPGYCAPEILRGC-AYGPEVDMWSVGIITYILL 244
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 364 FKSLKYLHSARILHRDIKPGNLL 386
+++ YLH I+HRD+KP NLL
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLL 180
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL---MGARHYSAAVDVWS 171
V+ A K+CDFG++ D K + + + Y APE + + + YS D+WS
Sbjct: 141 VLINALGQVKMCDFGISGYLVDDVAKDI--DAGCKPYMAPERINPELNQKGYSVKSDIWS 198
Query: 172 VGCIFAELLGRRILFQA-QSPVQQLGLITDLLGTPTPE 208
+G EL R + + +P QQL + + P+P+
Sbjct: 199 LGITMIELAILRFPYDSWGTPFQQLKQVVE---EPSPQ 233
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Query: 365 KSLKYLHSA-RILHRDIKPGNLLVNS 389
K+L++LHS ++HRD+KP N+L+N+
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINA 145
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 31/169 (18%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
+P L + + KI DFGLAR P + + T + APE++ S D
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLAR--RYKPREKLKVNFGTPEFLAPEVV-NYDFVSFPTD 270
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
+WSVG I LL F + + L I EE + +
Sbjct: 271 MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISE------------- 317
Query: 229 XXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRL 277
EA + ++L + + RIS + AL HP+L + +L
Sbjct: 318 ---------------EAKEFISKLLIKEKSWRISASEALKHPWLSDHKL 351
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 173 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 231
Query: 183 RILFQA 188
F+A
Sbjct: 232 LPPFRA 237
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNED 169
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 170 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 228
Query: 183 RILFQA 188
F+A
Sbjct: 229 LPPFRA 234
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNED 166
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 172 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 230
Query: 183 RILFQA 188
F+A
Sbjct: 231 LPPFRA 236
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNED 168
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ + KI DFG + E + + Y APE+ G ++ VDVWS+G
Sbjct: 145 LLLDGDMNIKIADFGFSN--EFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 203 ILYTLVSGSLPFDGQN 218
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H I+HRD+K NLL++ + +K
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLDGDMNIK 154
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 172 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 230
Query: 183 RILFQA 188
F+A
Sbjct: 231 LPPFRA 236
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNED 168
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 169 QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVA 226
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNED 165
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + KI DFG + E + Y APE+ G ++ VDVWS+G
Sbjct: 145 LLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 203 ILYTLVSGSLPFDGQN 218
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H RI+HRD+K NLL++++ +K
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIK 154
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 172 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 230
Query: 183 RILFQA 188
F+A
Sbjct: 231 LPPFRA 236
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNED 168
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 175 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 233
Query: 183 RILFQA 188
F+A
Sbjct: 234 LPPFRA 239
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 147 ALEYLHGKGIIHRDLKPENILLNED 171
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 172 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 230
Query: 183 RILFQA 188
F+A
Sbjct: 231 LPPFRA 236
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNED 168
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 170 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 228
Query: 183 RILFQA 188
F+A
Sbjct: 229 LPPFRA 234
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNED 166
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 147 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVA 204
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 119 ALEYLHGKGIIHRDLKPENILLNED 143
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + KI DFG + E + Y APE+ G ++ VDVWS+G
Sbjct: 144 LLLDADMNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 175 IFAELLGRRILFQAQS 190
I L+ + F Q+
Sbjct: 202 ILYTLVSGSLPFDGQN 217
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H I+HRD+K NLL++++ +K
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIK 153
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 149 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 207
Query: 183 RILFQA 188
F+A
Sbjct: 208 LPPFRA 213
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 121 ALEYLHGKGIIHRDLKPENILLNED 145
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 170 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 228
Query: 183 RILFQA 188
F+A
Sbjct: 229 LPPFRA 234
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNED 166
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 170 QITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 228
Query: 183 RILFQA 188
F+A
Sbjct: 229 LPPFRA 234
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNED 166
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 177 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAG 235
Query: 183 RILFQA 188
F+A
Sbjct: 236 LPPFRA 241
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 149 ALEYLHGKGIIHRDLKPENILLNED 173
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 148 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVA 205
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 120 ALEYLHGKGIIHRDLKPENILLNED 144
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q K+ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--KVADFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NLL++ +K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIK 181
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 123 SKICDFGLARVEEPDP--NKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAE 178
+ +CDFG A +PD +T + + T+ + APE+++G R A VDVWS C+
Sbjct: 225 AALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLH 283
Query: 179 LL 180
+L
Sbjct: 284 ML 285
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
A + L+YLHS RILH D+K N+L++S+
Sbjct: 194 ALEGLEYLHSRRILHGDVKADNVLLSSD 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM--GARHYSAAVDVWSVGCIFAELLG 181
KI DFG +++ M T Y APE+L+ G Y+ AVD WS+G I
Sbjct: 157 KITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI------ 208
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
L L G P E R L+
Sbjct: 209 ---------------LFICLSGYPPFSEHRTQVS------LKDQITSGKYNFIPEVWAEV 247
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
+ +A+ L+ ++L DP R + AL HP+L + ++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 284
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS---NCILK 394
+++YLH I+HRD+KP N+L++S +C++K
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 157
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q K+ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--KVADFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NLL++ +K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIK 181
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 154 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVA 211
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 126 ALEYLHGKGIIHRDLKPENILLNED 150
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM--GARHYSAAVDVWSVGCIFAELLG 181
KI DFG +++ M T Y APE+L+ G Y+ AVD WS+G I
Sbjct: 156 KITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI------ 207
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
L L G P E R L+
Sbjct: 208 ---------------LFICLSGYPPFSEHRTQVS------LKDQITSGKYNFIPEVWAEV 246
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
+ +A+ L+ ++L DP R + AL HP+L + ++
Sbjct: 247 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 283
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS---NCILK 394
+++YLH I+HRD+KP N+L++S +C++K
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 156
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q K+ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--KVADFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NLL++ +K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIK 181
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
+I DFG A+V P+ +A V T Y +PE+L + + D+W++GCI +L+
Sbjct: 169 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVA 226
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L+YLH I+HRD+KP N+L+N +
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNED 165
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
KI DFGLAR+ E + A + APE + R ++ DVWS G + EL+ +
Sbjct: 145 KIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTK 202
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM--GARHYSAAVDVWSVGCIFAELLG 181
KI DFG +++ M T Y APE+L+ G Y+ AVD WS+G I
Sbjct: 163 KITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI------ 214
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
L L G P E R L+
Sbjct: 215 ---------------LFICLSGYPPFSEHRTQVS------LKDQITSGKYNFIPEVWAEV 253
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
+ +A+ L+ ++L DP R + AL HP+L + ++
Sbjct: 254 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 290
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS---NCILK 394
+++YLH I+HRD+KP N+L++S +C++K
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 163
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L+++HS R++HRDIKP N+ + + ++K
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATGVVK 176
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V AT K+ D GL R A + V T YY +PE + Y+ D+WS+GC
Sbjct: 167 VFITATGVVKLGDLGLGRFFSSKTTAAHSL-VGTPYYMSPE-RIHENGYNFKSDIWSLGC 224
Query: 175 IFAEL 179
+ E+
Sbjct: 225 LLYEM 229
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 149 KITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 206
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 207 LPFYNQDHEKLFELI 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM--GARHYSAAVDVWSVGCIFAELLG 181
KI DFG +++ M T Y APE+L+ G Y+ AVD WS+G I
Sbjct: 157 KITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI------ 208
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
L L G P E R L+
Sbjct: 209 ---------------LFICLSGYPPFSEHRTQVS------LKDQITSGKYNFIPEVWAEV 247
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
+ +A+ L+ ++L DP R + AL HP+L + ++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 284
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS---NCILK 394
+++YLH I+HRD+KP N+L++S +C++K
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 157
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM--GARHYSAAVDVWSVGCIFAELLG 181
KI DFG +++ M T Y APE+L+ G Y+ AVD WS+G I
Sbjct: 157 KITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI------ 208
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
L L G P E R L+
Sbjct: 209 ---------------LFICLSGYPPFSEHRTQVS------LKDQITSGKYNFIPEVWAEV 247
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
+ +A+ L+ ++L DP R + AL HP+L + ++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 284
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS---NCILK 394
+++YLH I+HRD+KP N+L++S +C++K
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIK 157
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 151 KITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 208
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 209 LPFYNQDHEKLFELI 223
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q K+ DFG A RV K T + T Y APEI++ ++
Sbjct: 165 YRDLKPENLLIDQQGYI--KVADFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 215
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NLL++ +K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIK 182
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQY-YRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
KI DFGLAR + ++ Y + APE++ A +S DVWS G + ELL
Sbjct: 156 KITDFGLAR----EWHRTTKMSAAGAYAWMAPEVIR-ASMFSKGSDVWSYGVLLWELLTG 210
Query: 183 RILFQAQSPVQ-QLGLITDLLGTPTP 207
+ F+ + G+ + L P P
Sbjct: 211 EVPFRGIDGLAVAYGVAMNKLALPIP 236
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 150 KITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 207
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 208 LPFYNQDHEKLFELI 222
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS---NCILK 394
++++YLHS I HRD+KP NLL S N ILK
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 160
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 123 SKICDFGLARVEEPDP--NKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAE 178
+ +CDFG A +PD +T + + T+ + APE+++G R A VDVWS C+
Sbjct: 206 AALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLH 264
Query: 179 LL 180
+L
Sbjct: 265 ML 266
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
A + L+YLHS RILH D+K N+L++S+
Sbjct: 175 ALEGLEYLHSRRILHGDVKADNVLLSSD 202
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 108 RQPTRQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAA 166
R T + V+ KI DFGLAR + D K T + + APE L R Y+
Sbjct: 168 RDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQ 226
Query: 167 VDVWSVGCIFAELL 180
DVWS G + E+
Sbjct: 227 SDVWSFGVLMWEIF 240
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 155 RGMEYLASQKCIHRDLTARNVLVTENNVMK 184
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 292 KITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 349
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 350 LPFYNQDHEKLFELI 364
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 289 KITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 346
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 347 LPFYNQDHEKLFELI 361
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL+ + D N T + Y APE++ G + VDVWS G + +L R
Sbjct: 148 KIADFGLSNIM-TDGNFLKTS-CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
Query: 184 ILFQAQ 189
+ F +
Sbjct: 206 LPFDDE 211
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++Y H +I+HRD+KP NLL++ N +K
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVK 148
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
K+ DFG A RV K T + T Y APEI++ ++ Y+ AVD W++G + E+
Sbjct: 182 KVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAA 234
Query: 182 RRILFQAQSPVQ 193
F A P+Q
Sbjct: 235 GYPPFFADQPIQ 246
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NL+++ +K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIK 182
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
K+ DFG A RV K T + T Y APEI++ ++ Y+ AVD W++G + E+
Sbjct: 182 KVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAA 234
Query: 182 RRILFQAQSPVQ 193
F A P+Q
Sbjct: 235 GYPPFFADQPIQ 246
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NL+++ +K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIK 182
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
K+ DFG A RV K T + T Y APEI++ ++ Y+ AVD W++G + E+
Sbjct: 182 KVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAA 234
Query: 182 RRILFQAQSPVQ 193
F A P+Q
Sbjct: 235 GYPPFFADQPIQ 246
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NL+++ +K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIK 182
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
K+ DFG A RV K T + T Y APEI++ ++ Y+ AVD W++G + E+
Sbjct: 181 KVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAA 233
Query: 182 RRILFQAQSPVQ 193
F A P+Q
Sbjct: 234 GYPPFFADQPIQ 245
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NL+++ +K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIK 181
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
K+ DFG A RV K T + T Y APEI++ ++ Y+ AVD W++G + E+
Sbjct: 181 KVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAA 233
Query: 182 RRILFQAQSPVQ 193
F A P+Q
Sbjct: 234 GYPPFFADQPIQ 245
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NL+++ +K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIK 181
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 145 KITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 202
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 203 LPFYNQDHERLFELI 217
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L+YLHS +++RDIK NL+++ + +K
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
K+ DFG A RV K T + T Y APEI++ ++ Y+ AVD W++G + E+
Sbjct: 182 KVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAA 234
Query: 182 RRILFQAQSPVQ 193
F A P+Q
Sbjct: 235 GYPPFFADQPIQ 246
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NL+++ +K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIK 182
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 207
Query: 175 IFAELL 180
+ E++
Sbjct: 208 LLTEIV 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 199
Query: 175 IFAELL 180
+ E++
Sbjct: 200 LLTEIV 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 198
Query: 175 IFAELL 180
+ E++
Sbjct: 199 LLTEIV 204
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 200
Query: 175 IFAELL 180
+ E++
Sbjct: 201 LLTEIV 206
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 150 KITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 207
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 208 LPFYNQDHERLFELI 222
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L+YLHS +++RDIK NL+++ + +K
Sbjct: 122 ALEYLHSRDVVYRDIKLENLMLDKDGHIK 150
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 145 KITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 202
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 203 LPFYNQDHERLFELI 217
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L+YLHS +++RDIK NL+++ + +K
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 204
Query: 175 IFAELL 180
+ E++
Sbjct: 205 LLTEIV 210
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 145 KITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 202
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 203 LPFYNQDHERLFELI 217
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L+YLHS +++RDIK NL+++ + +K
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 148 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 206
Query: 175 IFAELL 180
+ E++
Sbjct: 207 LLTEIV 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y HS +++HRDIKP NLL+ S LK
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGELK 148
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFG + V P +A T Y PE++ G R + VD+WS+G + E L +
Sbjct: 148 KIADFGWS-VHAPSSRRAAL--CGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGK 203
Query: 184 ILFQAQS 190
F+A +
Sbjct: 204 PPFEANT 210
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 145 KITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 202
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 203 LPFYNQDHERLFELI 217
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L+YLHS +++RDIK NL+++ + +K
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 145 KITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 202
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 203 LPFYNQDHERLFELI 217
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L+YLHS +++RDIK NL+++ + +K
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 198
Query: 175 IFAELL 180
+ E++
Sbjct: 199 LLTEIV 204
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 123 SKICDFGLARVEEPDP--NKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAE 178
+ +CDFG A +PD +T + + T+ + APE++MG + A VD+WS C+
Sbjct: 190 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLH 248
Query: 179 LL 180
+L
Sbjct: 249 ML 250
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
A + L+YLH+ RILH D+K N+L++S+
Sbjct: 159 ALEGLEYLHTRRILHGDVKADNVLLSSD 186
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
KI DFGL + E M T Y APE+L Y AVD W +G + E++ R
Sbjct: 148 KITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 205
Query: 184 ILFQAQSPVQQLGLI 198
+ F Q + LI
Sbjct: 206 LPFYNQDHERLFELI 220
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L+YLHS +++RDIK NL+++ + +K
Sbjct: 120 ALEYLHSRDVVYRDIKLENLMLDKDGHIK 148
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 123 SKICDFGLARVEEPDP--NKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAE 178
+ +CDFG A +PD +T + + T+ + APE++MG + A VD+WS C+
Sbjct: 204 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLH 262
Query: 179 LL 180
+L
Sbjct: 263 ML 264
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
A + L+YLH+ RILH D+K N+L++S+
Sbjct: 173 ALEGLEYLHTRRILHGDVKADNVLLSSD 200
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
++ DFGLA RV K T + T Y APEI++ ++ Y+ AVD W++G + E+
Sbjct: 181 QVTDFGLAKRV------KGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAA 233
Query: 182 RRILFQAQSPVQ 193
F A P+Q
Sbjct: 234 GYPPFFADQPIQ 245
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NL+++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMID 175
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 115 VMYQATYSSKICDFGLAR--VEEPDPNKAMTQEVVTQYYRAPEIL---MGARHYSAAVDV 169
V+ A K+CDFG++ V+ + A T + + Y APE + + + YS D+
Sbjct: 185 VLINALGQVKMCDFGISGYLVD----SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDI 240
Query: 170 WSVGCIFAELLGRRILFQA-QSPVQQLGLITDLLGTPTPE 208
WS+G EL R + + +P QQL + + P+P+
Sbjct: 241 WSLGITMIELAILRFPYDSWGTPFQQLKQVVE---EPSPQ 277
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Query: 365 KSLKYLHSA-RILHRDIKPGNLLVNS 389
K+L++LHS ++HRD+KP N+L+N+
Sbjct: 164 KALEHLHSKLSVIHRDVKPSNVLINA 189
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 123 SKICDFGLARVEEPDP--NKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAE 178
+ +CDFG A +PD +T + + T+ + APE++MG + A VD+WS C+
Sbjct: 206 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLH 264
Query: 179 LL 180
+L
Sbjct: 265 ML 266
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
A + L+YLH+ RILH D+K N+L++S+
Sbjct: 175 ALEGLEYLHTRRILHGDVKADNVLLSSD 202
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+ +CI A + L YLH+ I+HRD+K N+L++ N + K
Sbjct: 141 RLEICI----GAARGLHYLHTRAIIHRDVKSINILLDENFVPK 179
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHY 163
Y+ +P L+ Q ++ DFG A RV+ T E Y APEI++ ++ Y
Sbjct: 185 YRDLKPENLLIDQQGYI--QVTDFGFAKRVKGATWTLCGTPE-----YLAPEIIL-SKGY 236
Query: 164 SAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
+ AVD W++G + E+ F A P+Q
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLID 196
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+ +CI A + L YLH+ I+HRD+K N+L++ N + K
Sbjct: 141 RLEICI----GAARGLHYLHTRAIIHRDVKSINILLDENFVPK 179
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 204
Query: 175 IFAELL 180
+ E++
Sbjct: 205 LLTEIV 210
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 183 RILFQAQSPVQQ 194
+ + S Q
Sbjct: 204 ELPWDQPSDSXQ 215
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE-ILMGARHYSAAVDVWSVG 173
++ A+ KI DFGLARV E + A + APE I G+ ++ DVWS G
Sbjct: 315 ILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFG 372
Query: 174 CIFAELL 180
+ E++
Sbjct: 373 ILLMEIV 379
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 145 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 203
Query: 175 IFAELL 180
+ E++
Sbjct: 204 LLTEIV 209
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE-ILMGARHYSAAVDVWSVG 173
++ A+ KI DFGLARV E + A + APE I G+ ++ DVWS G
Sbjct: 142 ILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVWSFG 199
Query: 174 CIFAELL 180
+ E++
Sbjct: 200 ILLMEIV 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 194
Query: 175 IFAELL 180
+ E++
Sbjct: 195 LLTEIV 200
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 123 SKICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
+KICDFGLAR + D N + + + APE + Y+ DVWS G EL
Sbjct: 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELF 241
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 123 SKICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
+KICDFGLAR + D N + + + APE + Y+ DVWS G EL
Sbjct: 202 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELF 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 198
Query: 175 IFAELL 180
+ E++
Sbjct: 199 LLTEIV 204
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
++L +LHS RI+HRD+K GN+L+
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMT 151
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL---MGARHYSAAVDVWS 171
V+ A K CDFG++ D K + + + Y APE + + + YS D+WS
Sbjct: 168 VLINALGQVKXCDFGISGYLVDDVAKDI--DAGCKPYXAPERINPELNQKGYSVKSDIWS 225
Query: 172 VGCIFAELLGRRILFQA-QSPVQQLGLITDLLGTPTPE 208
+G EL R + + +P QQL + + P+P+
Sbjct: 226 LGITXIELAILRFPYDSWGTPFQQLKQVVE---EPSPQ 260
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 22/26 (84%), Gaps = 1/26 (3%)
Query: 365 KSLKYLHSA-RILHRDIKPGNLLVNS 389
K+L++LHS ++HRD+KP N+L+N+
Sbjct: 147 KALEHLHSKLSVIHRDVKPSNVLINA 172
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 208
Query: 175 IFAELL 180
+ E++
Sbjct: 209 LLTEIV 214
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVN 388
++L +LHS RI+HRD+K GN+L+
Sbjct: 119 LEALNFLHSKRIIHRDLKAGNVLMT 143
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
A K L YL +I+HRD+KP N+LVNS +K
Sbjct: 174 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 207
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL-LGR 182
K+CDFG V + V T+ Y +PE L G HYS D+WS+G E+ +GR
Sbjct: 207 KLCDFG---VSGQLIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 123 SKICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
+KICDFGLAR + D N + + + APE + Y+ DVWS G EL
Sbjct: 207 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELF 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E + A + APE + ++ DVWS G
Sbjct: 135 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 193
Query: 175 IFAELL 180
+ E++
Sbjct: 194 LLTEIV 199
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ + K+CDFG V + V T+ Y +PE L G HYS D+WS+G
Sbjct: 163 ILVNSRGEIKLCDFG---VSGQLIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGL 218
Query: 175 IFAEL-LGR 182
E+ +GR
Sbjct: 219 SLVEMAVGR 227
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
A K L YL +I+HRD+KP N+LVNS +K
Sbjct: 139 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 172
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L+YLHS I++RD+KP N+L++ N +K
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNGHIK 146
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFG A+ PD + T Y APE++ + Y+ ++D WS G + E+L
Sbjct: 146 KITDFGFAKYV-PDVTYXLCG---TPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLA 198
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 374
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 278 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 374
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 278 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 374
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 278 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 320
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 123 SKICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
+KICDFGLAR + D N + + + APE + Y+ DVWS G EL
Sbjct: 207 TKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELF 264
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 403 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 457
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 361 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 403
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 123 SKICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
+KICDFGLAR + D N + + + APE + Y+ DVWS G EL
Sbjct: 200 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELF 257
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLXGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NLL++ ++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR +P+ + + + APE + + YS DVWS G + E+
Sbjct: 239 KICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFD-KIYSTKSDVWSYGVLLWEIF 295
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 31/151 (20%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
S KI DFGLA PD +T T + APEI+ D+W++G + LL
Sbjct: 189 SVKIIDFGLATKLNPDEIVKVT--TATAEFAAPEIV-DREPVGFYTDMWAIGVLGYVLLS 245
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
F + ++ L Q K
Sbjct: 246 GLSPFAGEDDLETL----------------------------QNVKRCDWEFDEDAFSSV 277
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ EA + +L +P KR++V+ AL HP+L
Sbjct: 278 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 322 FDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIK 381
F+D +E L E+ IA + IN A + LK++H I+H DIK
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK 176
Query: 382 PGNLL 386
P N++
Sbjct: 177 PENIM 181
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLK 145
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL-LGR 182
K+CDFG V + V T+ Y +PE L G HYS D+WS+G E+ +GR
Sbjct: 145 KLCDFG---VSGQLIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGR 200
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
A K L YL +I+HRD+KP N+LVNS +K
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 154 KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 208
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 103 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 154
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL-LGR 182
K+CDFG V + V T+ Y +PE L G HYS D+WS+G E+ +GR
Sbjct: 145 KLCDFG---VSGQLIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGR 200
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
A K L YL +I+HRD+KP N+LVNS +K
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL-LGR 182
K+CDFG V + V T+ Y +PE L G HYS D+WS+G E+ +GR
Sbjct: 145 KLCDFG---VSGQLIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGR 200
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
A K L YL +I+HRD+KP N+LVNS +K
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL-LGR 182
K+CDFG V + V T+ Y +PE L G HYS D+WS+G E+ +GR
Sbjct: 145 KLCDFG---VSGQLIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGR 200
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
A K L YL +I+HRD+KP N+LVNS +K
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL-LGR 182
K+CDFG V + V T+ Y +PE L G HYS D+WS+G E+ +GR
Sbjct: 145 KLCDFG---VSGQLIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGR 200
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
A K L YL +I+HRD+KP N+LVNS +K
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 144 KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 198
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 102 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 144
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 143 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 201
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLK 143
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHY 163
Y+ +P L+ Q ++ DFG A RV+ T E Y APEI++ ++ Y
Sbjct: 150 YRDLKPENLLIDQQGYI--QVTDFGFAKRVKGRTWTLCGTPE-----YLAPEIIL-SKGY 201
Query: 164 SAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
+ AVD W++G + E+ F A P+Q
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 231
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLID 161
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 157 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 207
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLID 168
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 183 RILFQAQS 190
+ + S
Sbjct: 204 ELPWDQPS 211
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 183 RILFQAQS 190
+ + S
Sbjct: 205 ELPWDQPS 212
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLK 145
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLK 145
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLK 145
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 157 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 207
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLID 168
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEV-VTQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 185 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 235
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLID 196
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 124 KICDFGLARVEEPDPNKAMT-----------QEVVTQYYRAPEILMGARHYSAAVDVWSV 172
K+ DFGL + D + +V T+ Y +PE + G +YS VD++S+
Sbjct: 204 KVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHG-NNYSHKVDIFSL 262
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTP 207
G I EL L+ + ++++ +ITD+ P
Sbjct: 263 GLILFEL-----LYSFSTQMERVRIITDVRNLKFP 292
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++++LHS ++HRD+KP N+ + ++K
Sbjct: 175 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVK 204
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHY 163
Y+ +P L+ Q ++ DFG A RV+ T E Y APEI++ ++ Y
Sbjct: 165 YRDLKPENLLIDQQGYI--QVTDFGFAKRVKGRTWTLCGTPE-----YLAPEIIL-SKGY 216
Query: 164 SAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
+ AVD W++G + E+ F A P+Q
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLID 176
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ AT K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 142 VLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 200
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 201 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN-SNCI 392
+L YL S R +HRDI N+LV+ ++C+
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSATDCV 150
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 165 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 215
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLID 176
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL---MGARH--YSAAVDVWSVGCIFAE 178
K+ DFG + + DP + + + T Y APEI+ M H Y VD+WS G I
Sbjct: 164 KLTDFGFSC--QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 179 LLG 181
LL
Sbjct: 222 LLA 224
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 370 LHSARILHRDIKPGNLLVNSNCILK 394
LH I+HRD+KP N+L++ + +K
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIK 164
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLK 145
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLK 145
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLK 144
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLK 145
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 165 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 215
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLID 176
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL---MGARH--YSAAVDVWSVGCIFAE 178
K+ DFG + + DP + + + T Y APEI+ M H Y VD+WS G I
Sbjct: 151 KLTDFGFSC--QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 179 LLG 181
LL
Sbjct: 209 LLA 211
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 370 LHSARILHRDIKPGNLLVNSNCILK 394
LH I+HRD+KP N+L++ + +K
Sbjct: 127 LHKLNIVHRDLKPENILLDDDMNIK 151
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 165 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 215
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLID 176
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 165 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 215
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLID 176
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEV-VTQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 185 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 235
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLID 196
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 151 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 205
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 109 RLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 151
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 208
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 103 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 154
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
KI DFGLA V + + + ++ T Y APE+L ++ VDVWS G + +L
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
YLH I HRDIKP NLL++ LK
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLK 145
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 165 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 215
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLID 176
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 208
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 103 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 154
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ AT K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 522 VLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 580
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 581 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN-SNCI 392
+L YL S R +HRDI N+LV+ ++C+
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSATDCV 530
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 165 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 215
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLID 176
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 208
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 103 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 154
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 208
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 103 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 154
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 159 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 209
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLID 170
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 145 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 199
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 94 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 145
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 208
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 103 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 154
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L++ Q Y ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKP-ENLIIDQQGYI-QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIII-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NL+++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLIID 175
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 208
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD+ N+LV N + K
Sbjct: 103 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCK 154
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 208
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 103 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 154
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHY 163
Y+ +P L+ Q ++ DFG A+ K T + T Y APEI++ ++ Y
Sbjct: 151 YRDLKPENLLIDEQGYI--QVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL-SKGY 202
Query: 164 SAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
+ AVD W++G + E+ F A P+Q
Sbjct: 203 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 232
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ +YLHS +++RD+KP NLL++ ++
Sbjct: 140 TFEYLHSLDLIYRDLKPENLLIDEQGYIQ 168
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 143 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 197
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 92 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 143
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 147 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 201
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 105 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 147
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARHYSAAVDVWSVGCIFAE 178
KI DFG++R EE D A + + V + APE L R YS+ DVWS G + E
Sbjct: 253 KISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEALNYGR-YSSESDVWSFGILLWE 307
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGLAR+ E + A + APE + R ++ DVWS G + EL
Sbjct: 151 KVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 205
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 109 RLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 151
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
++ DFG A RV K T + T Y APEI++ ++ Y+ AVD W++G + E+
Sbjct: 181 QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAA 233
Query: 182 RRILFQAQSPVQ 193
F A P+Q
Sbjct: 234 GYPPFFADQPIQ 245
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NL+++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMID 175
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ D+G+ + E P + T Y APEIL G Y +VD W++G
Sbjct: 141 VLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWWALGV 198
Query: 175 IFAELLGRRILF 186
+ E++ R F
Sbjct: 199 LMFEMMAGRSPF 210
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YLH I++RD+K N+L++S +K
Sbjct: 122 ALNYLHERGIIYRDLKLDNVLLDSEGHIK 150
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ D+G+ + E P + T Y APEIL G Y +VD W++G
Sbjct: 137 VLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWWALGV 194
Query: 175 IFAELLGRR 183
+ E++ R
Sbjct: 195 LMFEMMAGR 203
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YLH I++RD+K N+L++S +K
Sbjct: 118 ALNYLHERGIIYRDLKLDNVLLDSEGHIK 146
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-----KAMTQEVVTQYYRAPEILMG 159
Y R + ++ + K+ DFGL+R E D + A+ ++ + + APE +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR-WTAPEAIQ- 213
Query: 160 ARHYSAAVDVWSVGCIFAELL 180
R +++A DVWS G + E++
Sbjct: 214 YRKFTSASDVWSYGIVMWEVM 234
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HRD+ N+LVNSN + K
Sbjct: 147 GMKYLADMNYVHRDLAARNILVNSNLVCK 175
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 124 KICDFGLARVEEPDPNKAM-----------TQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
K+ DFGL + D + T +V T+ Y +PE + G YS VD++S+
Sbjct: 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSL 216
Query: 173 GCIFAELL 180
G I ELL
Sbjct: 217 GLILFELL 224
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++++LHS ++HRD+KP N+ + ++K
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVK 158
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ D+G+ + E P + T Y APEIL G Y +VD W++G
Sbjct: 152 VLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWWALGV 209
Query: 175 IFAELLGRRILF 186
+ E++ R F
Sbjct: 210 LMFEMMAGRSPF 221
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YLH I++RD+K N+L++S +K
Sbjct: 133 ALNYLHERGIIYRDLKLDNVLLDSEGHIK 161
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ T S KI DFGLAR+ E A + APE + ++ DVWS G
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGI 198
Query: 175 IFAELL 180
+ E++
Sbjct: 199 LLTEIV 204
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ D+G+ + E P + T Y APEIL G Y +VD W++G + E++ R
Sbjct: 193 KLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGR 250
Query: 184 ILF 186
F
Sbjct: 251 SPF 253
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YLH I++RD+K N+L++S +K
Sbjct: 165 ALNYLHERGIIYRDLKLDNVLLDSEGHIK 193
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KICDFGLAR D N + + + APE L Y+ DVWS G + E+
Sbjct: 212 KICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIF 268
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL R+ E + A + APE + R ++ DVWS G + EL
Sbjct: 321 KVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTEL 375
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+K EM K++ R+P ++ + + Y+ +HRD++ N+LV N + K
Sbjct: 270 LKGEMGKYL-------RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 321
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-----KAMTQEVVTQYYRAPEILMG 159
Y R + ++ + K+ DFGL+R E D + A+ ++ + + APE +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR-WTAPEAIQ- 187
Query: 160 ARHYSAAVDVWSVGCIFAELL 180
R +++A DVWS G + E++
Sbjct: 188 YRKFTSASDVWSYGIVMWEVM 208
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+KYL +HR + N+LVNSN + K
Sbjct: 121 GMKYLADMNYVHRALAARNILVNSNLVCK 149
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV-VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLAR DP+ + + + APE + R Y+ DVWS G + E+
Sbjct: 184 KIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIF 240
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARHYSAAVDVWSVGCIFAE 178
KI DFG++R EE D A + + V + APE L R YS+ DVWS G + E
Sbjct: 253 KISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEALNYGR-YSSESDVWSFGILLWE 307
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL---MGARH--YSAAVDVWSVGCIFAE 178
K+ DFG + + DP + + T Y APEI+ M H Y VD+WS G I
Sbjct: 164 KLTDFGFSC--QLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 179 LLG 181
LL
Sbjct: 222 LLA 224
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 370 LHSARILHRDIKPGNLLVNSNCILK 394
LH I+HRD+KP N+L++ + +K
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIK 164
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YLH +I+HRD+K GN+L + +K
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIK 175
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE----VVTQYYRAPEILM----GARHYSAA 166
+++ K+ DFG++ N Q + T Y+ APE++M R Y
Sbjct: 166 ILFTLDGDIKLADFGVSA-----KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 167 VDVWSVGCIFAEL 179
DVWS+G E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YLH +I+HRD+K GN+L + +K
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIK 175
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE----VVTQYYRAPEILM----GARHYSAA 166
+++ K+ DFG++ N Q + T Y+ APE++M R Y
Sbjct: 166 ILFTLDGDIKLADFGVSA-----KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 167 VDVWSVGCIFAEL 179
DVWS+G E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YLH +I+HRD+K GN+L + +K
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIK 175
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE----VVTQYYRAPEILM----GARHYSAA 166
+++ K+ DFG++ N Q + T Y+ APE++M R Y
Sbjct: 166 ILFTLDGDIKLADFGVSA-----KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 167 VDVWSVGCIFAEL 179
DVWS+G E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 366 SLKYLHSARILHRDIKPGNLLV 387
+L+YLH RI+HRD+KP N+++
Sbjct: 134 ALRYLHENRIIHRDLKPENIVL 155
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 366 SLKYLHSARILHRDIKPGNLLV 387
+L+YLH RI+HRD+KP N+++
Sbjct: 133 ALRYLHENRIIHRDLKPENIVL 154
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA-RHYSAAVDVWSVGCIFAELL 180
+ DFGL++ D + T Y AP+I+ G + AVD WS+G + ELL
Sbjct: 200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 256
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L++LH I++RDIK N+L++SN
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSN 195
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQ--YYRAPEILMGARHYSAAVDVWSV 172
++ ++ KI DFGLA++ D + + +E ++ APE L +S DVWS
Sbjct: 142 ILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL-SDNIFSRQSDVWSF 200
Query: 173 GCIFAELL 180
G + EL
Sbjct: 201 GVVLYELF 208
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K ++YL S R +HRD+ N+LV S +K
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVK 151
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 124 KICDFGLAR--VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC-IFAELL 180
KICDFG ++ V P V T Y APE+L+ + DVWS G ++ L+
Sbjct: 156 KICDFGYSKSSVLHSQPKST----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 211
Query: 181 G 181
G
Sbjct: 212 G 212
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 31/151 (20%)
Query: 125 ICDFGLARVEEPDP---NKAMTQEVVTQYYRAPEILMGA--RHYSAAVDVWSVGCIFAEL 179
I DFGL + + + T +RAPE+L + R + ++D++S+GC+F +
Sbjct: 187 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
L + ++ +I + + D KC R
Sbjct: 247 LSKGKHPFGDKYSRESNIIRGIF----------SLDEMKCLHDRSL-------------- 282
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHP 270
EA L+ QM+ DP KR + L HP
Sbjct: 283 --IAEATDLISQMIDHDPLKRPTAMKVLRHP 311
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC 391
P+ + Q A+ + +LHS +I+HRD+KP N+LV+++
Sbjct: 135 PISLLRQIAS--GVAHLHSLKIIHRDLKPQNILVSTSS 170
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K L YLHS R +HRDIK N+L++ +K
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGDVK 156
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 124 KICDFGLAR--VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC-IFAELL 180
KICDFG ++ V P V T Y APE+L+ + DVWS G ++ L+
Sbjct: 157 KICDFGYSKSSVLHSQPKST----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 181 G 181
G
Sbjct: 213 G 213
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I D GLA + P+ + V T Y APE+L Y ++ D +S+GC+ +LL
Sbjct: 332 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-- 385
Query: 183 RILFQAQSPVQQ 194
+ SP +Q
Sbjct: 386 ----RGHSPFRQ 393
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 31/151 (20%)
Query: 125 ICDFGLARVEEPDP---NKAMTQEVVTQYYRAPEILMGA--RHYSAAVDVWSVGCIFAEL 179
I DFGL + + + T +RAPE+L + R + ++D++S+GC+F +
Sbjct: 187 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
L + ++ +I + + D KC R
Sbjct: 247 LSKGKHPFGDKYSRESNIIRGIF----------SLDEMKCLHDRSL-------------- 282
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHP 270
EA L+ QM+ DP KR + L HP
Sbjct: 283 --IAEATDLISQMIDHDPLKRPTAMKVLRHP 311
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC 391
P+ + Q A+ + +LHS +I+HRD+KP N+LV+++
Sbjct: 135 PISLLRQIAS--GVAHLHSLKIIHRDLKPQNILVSTSS 170
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 120 TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
T KI DFGL + D + T+ T Y +PE + ++ Y VD++++G I AEL
Sbjct: 172 TKQVKIGDFGLVTSLKNDGKR--TRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAEL 228
Query: 180 L 180
L
Sbjct: 229 L 229
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 365 KSLKYLHSARILHRDIKPGNLLV 387
K + Y+HS +++HRD+KP N+ +
Sbjct: 147 KGVDYIHSKKLIHRDLKPSNIFL 169
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I D GLA + P+ + V T Y APE+L Y ++ D +S+GC+ +LL
Sbjct: 331 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-- 384
Query: 183 RILFQAQSPVQQ 194
+ SP +Q
Sbjct: 385 ----RGHSPFRQ 392
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 38/154 (24%)
Query: 124 KICDFGLAR--VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC-IFAELL 180
KICDFG ++ V P V T Y APE+L+ + DVWS G ++ L+
Sbjct: 158 KICDFGYSKSSVLHSQPKST----VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLV 213
Query: 181 GRRILFQAQSPVQQLGLITDLLGT--PTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXX 238
G + P I +L P+++R
Sbjct: 214 GAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR--------------------------- 246
Query: 239 XXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ E HL+ ++ DP RIS+ H +
Sbjct: 247 --ISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 32/165 (19%)
Query: 109 QPTRQLVMYQATYSS-KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAV 167
+P L+ +A ++ K+ DFGLA E + ++A T Y +PE+L YS V
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAI--EVNDSEAWHGFAGTPGYLSPEVLK-KDPYSKPV 188
Query: 168 DVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK 227
D+W+ G I L L+G P + H L K
Sbjct: 189 DIWACGVILYIL---------------------LVGYPPFWDEDQ-------HRLYAQIK 220
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
T EA L+ ML +P KRI+ + AL P++
Sbjct: 221 AGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNS 389
+S+ Y HS I+HR++KP NLL+ S
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLAS 140
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I D GLA + P+ + V T Y APE+L Y ++ D +S+GC+ +LL
Sbjct: 332 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-- 385
Query: 183 RILFQAQSPVQQ 194
+ SP +Q
Sbjct: 386 ----RGHSPFRQ 393
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 124 KICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
+I D GLA + P+ + V T Y APE+L Y ++ D +S+GC+ +LL
Sbjct: 332 RISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-- 385
Query: 183 RILFQAQSPVQQ 194
+ SP +Q
Sbjct: 386 ----RGHSPFRQ 393
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 32/165 (19%)
Query: 109 QPTRQLVMYQATYSS-KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAV 167
+P L+ +A ++ K+ DFGLA E + ++A T Y +PE+L YS V
Sbjct: 131 KPENLLLASKAKGAAVKLADFGLAI--EVNDSEAWHGFAGTPGYLSPEVLK-KDPYSKPV 187
Query: 168 DVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK 227
D+W+ G I L L+G P + H L K
Sbjct: 188 DIWACGVILYIL---------------------LVGYPPFWDEDQ-------HRLYAQIK 219
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
T EA L+ ML +P KRI+ + AL P++
Sbjct: 220 AGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNS 389
+S+ Y HS I+HR++KP NLL+ S
Sbjct: 114 LESIAYCHSNGIVHRNLKPENLLLAS 139
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 122 SSKICDFG----LARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFA 177
S +I DFG LA + NK V T + APE++ R Y D+WS G
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 213
Query: 178 EL 179
EL
Sbjct: 214 EL 215
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
+ L+YLH +HRD+K GN+L+ +
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGED 152
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YLH +I+HRD+K GN+L + +K
Sbjct: 118 LDALNYLHDNKIIHRDLKAGNILFTLDGDIK 148
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM----GARHYSAAVDVW 170
+++ K+ DFG++ + + T Y+ APE++M R Y DVW
Sbjct: 139 ILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 198
Query: 171 SVGCIFAEL 179
S+G E+
Sbjct: 199 SLGITLIEM 207
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 122 SSKICDFG----LARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFA 177
S +I DFG LA + NK V T + APE++ R Y D+WS G
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218
Query: 178 EL 179
EL
Sbjct: 219 EL 220
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSN 390
+ L+YLH +HRD+K GN+L+ +
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGED 157
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 32/165 (19%)
Query: 109 QPTRQLVMYQATYSS-KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAV 167
+P L+ +A ++ K+ DFGLA E + ++A T Y +PE+L YS V
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAI--EVNDSEAWHGFAGTPGYLSPEVLK-KDPYSKPV 188
Query: 168 DVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK 227
D+W+ G I L L+G P + H L K
Sbjct: 189 DIWACGVILYIL---------------------LVGYPPFWDEDQ-------HRLYAQIK 220
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
T EA L+ ML +P KRI+ + AL P++
Sbjct: 221 AGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNS 389
+S+ Y HS I+HR++KP NLL+ S
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLAS 140
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+++ +LH+ I+HRD+KP N+L++ N ++
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDDNMQIR 240
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 56/155 (36%), Gaps = 35/155 (22%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL---MGARH--YSAAVDVWSVGCIFAE 178
++ DFG + EP + + + T Y APEIL M H Y VD+W+ G I
Sbjct: 240 RLSDFGFSCHLEP--GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFT 297
Query: 179 LLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXX 238
LL F + + L +I + + E K
Sbjct: 298 LLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVK-------------------- 337
Query: 239 XXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD 273
L+ ++L DP R++ AL HP+ +
Sbjct: 338 --------DLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM----GARHYSAAVDVW 170
V+ ++ DFG D + V T Y +PEIL G Y D W
Sbjct: 206 VLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 265
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITD 200
S+G E+L F A+S V+ G I +
Sbjct: 266 SLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM----GARHYSAAVDVWSVGCIFAEL 179
++ DFG D + V T Y +PEIL G Y D WS+G E+
Sbjct: 231 RLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 290
Query: 180 LGRRILFQAQSPVQQLGLITD 200
L F A+S V+ G I +
Sbjct: 291 LYGETPFYAESLVETYGKIMN 311
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 120 TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
T KI DFGL + D + ++ T Y +PE + ++ Y VD++++G I AEL
Sbjct: 158 TKQVKIGDFGLVTSLKNDGKRXRSKG--TLRYMSPE-QISSQDYGKEVDLYALGLILAEL 214
Query: 180 L 180
L
Sbjct: 215 L 215
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 365 KSLKYLHSARILHRDIKPGNLLV 387
K + Y+HS ++++RD+KP N+ +
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFL 155
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 32/165 (19%)
Query: 109 QPTRQLVMYQATYSS-KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAV 167
+P L+ +A ++ K+ DFGLA E + ++A T Y +PE+L YS V
Sbjct: 155 KPENLLLASKAKGAAVKLADFGLAI--EVNDSEAWHGFAGTPGYLSPEVLK-KDPYSKPV 211
Query: 168 DVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK 227
D+W+ G I L L+G P + H L K
Sbjct: 212 DIWACGVILYIL---------------------LVGYPPFWDEDQ-------HRLYAQIK 243
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
T EA L+ ML +P KRI+ + AL P++
Sbjct: 244 AGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNS 389
+S+ Y HS I+HR++KP NLL+ S
Sbjct: 138 LESIAYCHSNGIVHRNLKPENLLLAS 163
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y APEI++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + ++ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG+ R D + T + +PE+ +R YS+ DVWS G + E+
Sbjct: 143 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVF 198
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YL A ++HRD+ N LV N ++K
Sbjct: 114 EGMAYLEEASVIHRDLAARNCLVGENQVIK 143
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Query: 369 YLHSARILHRDIKPGNLLV-NSNCIL 393
YLH I+HRDIKP N+L+ N N +L
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLL 186
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL--LG 181
K+ DFGL+R D + + PE+LM ++ +S+ D+W+ G + E+ LG
Sbjct: 160 KVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLG 218
Query: 182 R 182
+
Sbjct: 219 K 219
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++E H+F +QL +C ++++YL S + LHRD+ N LVN ++K
Sbjct: 110 LREMRHRFQTQQLLEMCKDVC--------EAMEYLESKQFLHRDLAARNCLVNDQGVVK 160
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHY 163
Y+ +P L+ Q ++ DFG A RV+ T E + APEI++ ++ Y
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRVKGRTWXLCGTPEAL-----APEIIL-SKGY 215
Query: 164 SAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
+ AVD W++G + E+ F A P+Q
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG+ R D + T + +PE+ +R YS+ DVWS G + E+
Sbjct: 163 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVF 218
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YL A ++HRD+ N LV N ++K
Sbjct: 134 EGMAYLEEACVIHRDLAARNCLVGENQVIK 163
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG+ R D + T + +PE+ +R YS+ DVWS G + E+
Sbjct: 144 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVF 199
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YL A ++HRD+ N LV N ++K
Sbjct: 115 EGMAYLEEACVIHRDLAARNCLVGENQVIK 144
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 200
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 201 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YL S R +HRDI N+LV+SN +K
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVK 151
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE-ILMGARHYSAAVDVWSVG 173
++ A+ KI DFGLARV P K + APE I G+ ++ DVWS G
Sbjct: 309 ILVSASLVCKIADFGLARVGAKFPIK----------WTAPEAINFGS--FTIKSDVWSFG 356
Query: 174 CIFAELL 180
+ E++
Sbjct: 357 ILLMEIV 363
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG+ R D + T + +PE+ +R YS+ DVWS G + E+
Sbjct: 146 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVF 201
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YL A ++HRD+ N LV N ++K
Sbjct: 117 EGMAYLEEACVIHRDLAARNCLVGENQVIK 146
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG+ R D + T + +PE+ +R YS+ DVWS G + E+
Sbjct: 143 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVF 198
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YL A ++HRD+ N LV N ++K
Sbjct: 114 EGMAYLEEACVIHRDLAARNCLVGENQVIK 143
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
K+ DFG+ R D + T + +PE+ +R YS+ DVWS G + E+
Sbjct: 141 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR-YSSKSDVWSFGVLMWEVF 196
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YL A ++HRD+ N LV N ++K
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQVIK 141
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + + +S+ DVWS
Sbjct: 500 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSF 558
Query: 173 GCIFAE 178
G + E
Sbjct: 559 GVLMWE 564
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM----GARHYSAAVDVWSVGCIFAEL 179
++ DFG D + V T Y +PEIL G Y D WS+G E+
Sbjct: 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM 274
Query: 180 LGRRILFQAQSPVQQLGLITD 200
L F A+S V+ G I +
Sbjct: 275 LYGETPFYAESLVETYGKIMN 295
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
++ +H +HRDIKP N+L++ N
Sbjct: 187 AIDSVHQLHYVHRDIKPDNILMDMN 211
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQ--YYRAPEILMGARHYSAAVDVWSV 172
++ ++ KI DFGLA++ D + + +E ++ APE L +S DVWS
Sbjct: 145 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL-SDNIFSRQSDVWSF 203
Query: 173 GCIFAELL 180
G + EL
Sbjct: 204 GVVLYELF 211
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K ++YL S R +HRD+ N+LV S +K
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVK 154
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + + +S+ DVWS
Sbjct: 501 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSF 559
Query: 173 GCIFAE 178
G + E
Sbjct: 560 GVLMWE 565
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQ--YYRAPEILMGARHYSAAVDVWSV 172
++ ++ KI DFGLA++ D + + +E ++ APE L +S DVWS
Sbjct: 146 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL-SDNIFSRQSDVWSF 204
Query: 173 GCIFAELL 180
G + EL
Sbjct: 205 GVVLYELF 212
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K ++YL S R +HRD+ N+LV S +K
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVK 155
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K L YLHS + +HRDIK N+L++ + +K
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 159
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFG+A + D V T ++ APE++ + Y + D+WS+G EL
Sbjct: 159 KLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIEL 212
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K L YLHS + +HRDIK N+L++ + +K
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 144
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFG+A + D V T ++ APE++ + Y + D+WS+G EL
Sbjct: 144 KLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIEL 197
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
+L YL + RI+HRD+KP N+L++ +
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILLDEH 151
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARH--YSAAVDVWSVGCIFAELL-G 181
I DF +A + + +T T+ Y APE+ + YS AVD WS+G ELL G
Sbjct: 156 ITDFNIAAMLPRE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
Query: 182 RR 183
RR
Sbjct: 214 RR 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K L YLHS + +HRDIK N+L++ +K
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVK 160
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFG+A + D V T ++ APE++ + Y + D+WS+G EL
Sbjct: 160 KLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIEL 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K L YLHS + +HRDIK N+L++ + +K
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 144
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFG+A + D V T ++ APE++ + Y + D+WS+G EL
Sbjct: 144 KLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIEL 197
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K L YLHS + +HRDIK N+L++ + +K
Sbjct: 134 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 164
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFG+A + D V T ++ APE++ + Y + D+WS+G EL
Sbjct: 164 KLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIEL 217
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQ--YYRAPEILMGARHYSAAVDVWSV 172
++ ++ KI DFGLA++ D + + +E ++ APE L +S DVWS
Sbjct: 158 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL-SDNIFSRQSDVWSF 216
Query: 173 GCIFAELL 180
G + EL
Sbjct: 217 GVVLYELF 224
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
K ++YL S R +HRD+ N+LV S +K
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVK 167
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + +S+ DVWS
Sbjct: 142 VLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSF 200
Query: 173 GCIFAE 178
G + E
Sbjct: 201 GVLMWE 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + +S+ DVWS
Sbjct: 136 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSF 194
Query: 173 GCIFAE 178
G + E
Sbjct: 195 GVLMWE 200
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + +S+ DVWS
Sbjct: 142 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSF 200
Query: 173 GCIFAE 178
G + E
Sbjct: 201 GVLMWE 206
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + +S+ DVWS
Sbjct: 156 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSF 214
Query: 173 GCIFAE 178
G + E
Sbjct: 215 GVLMWE 220
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + +S+ DVWS
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSF 196
Query: 173 GCIFAE 178
G + E
Sbjct: 197 GVLMWE 202
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + +S+ DVWS
Sbjct: 148 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSF 206
Query: 173 GCIFAE 178
G + E
Sbjct: 207 GVLMWE 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL--LG 181
K+ DFGL+R D + + PE+LM ++ +S+ D+W+ G + E+ LG
Sbjct: 144 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLG 202
Query: 182 R 182
+
Sbjct: 203 K 203
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++E H+F +QL +C ++++YL S + LHRD+ N LVN ++K
Sbjct: 94 LREMRHRFQTQQLLEMCKDVC--------EAMEYLESKQFLHRDLAARNCLVNDQGVVK 144
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
Query: 124 KICDFGLARVEEPDPN-------KAMTQEVVTQ----YYRAPEILMGARHY--SAAVDVW 170
K+CDFG A P+ +A+ +E +T+ YR PEI+ ++ D+W
Sbjct: 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIW 237
Query: 171 SVGCIFAELLGRRILFQ 187
++GCI L R+ F+
Sbjct: 238 ALGCILYLLCFRQHPFE 254
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + +S+ DVWS
Sbjct: 158 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSF 216
Query: 173 GCIFAE 178
G + E
Sbjct: 217 GVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ + +KI DFGL++ D N KA T + APE + +S+ DVWS
Sbjct: 158 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI-NYYKFSSKSDVWSF 216
Query: 173 GCIFAE 178
G + E
Sbjct: 217 GVLMWE 222
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSV 172
VM + KI DFG+ + D +T + T Y APEI+ + Y +VD W+
Sbjct: 473 VMLDSEGHIKIADFGMCKENIWD---GVTTKXFCGTPDYIAPEII-AYQPYGKSVDWWAF 528
Query: 173 GCIFAELLGRRILFQAQS 190
G + E+L + F+ +
Sbjct: 529 GVLLYEMLAGQAPFEGED 546
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL--LG 181
K+ DFGL+R D + + PE+LM ++ +S+ D+W+ G + E+ LG
Sbjct: 145 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLG 203
Query: 182 R 182
+
Sbjct: 204 K 204
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++E H+F +QL +C ++++YL S + LHRD+ N LVN ++K
Sbjct: 95 LREMRHRFQTQQLLEMCKDVC--------EAMEYLESKQFLHRDLAARNCLVNDQGVVK 145
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 20/24 (83%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS 389
+L YLHS I++RD+KP N+L++S
Sbjct: 151 ALGYLHSLNIVYRDLKPENILLDS 174
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
+ DFGL + E + N + T Y APE+L + Y VD W +G + E+L
Sbjct: 180 LTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEML 233
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL--LG 181
K+ DFGL+R D + + PE+LM ++ +S+ D+W+ G + E+ LG
Sbjct: 160 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLG 218
Query: 182 R 182
+
Sbjct: 219 K 219
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++E H+F +QL +C ++++YL S + LHRD+ N LVN ++K
Sbjct: 110 LREMRHRFQTQQLLEMCKDVC--------EAMEYLESKQFLHRDLAARNCLVNDQGVVK 160
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL--LG 181
K+ DFGL+R D + + PE+LM ++ +S+ D+W+ G + E+ LG
Sbjct: 140 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLG 198
Query: 182 R 182
+
Sbjct: 199 K 199
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++E H+F +QL +C ++++YL S + LHRD+ N LVN ++K
Sbjct: 90 LREMRHRFQTQQLLEMCKDVC--------EAMEYLESKQFLHRDLAARNCLVNDQGVVK 140
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ Y +KI DFGL+R +E K M + V + A E L Y+ DVWS G
Sbjct: 170 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--WMAIESL-NYSVYTTNSDVWSYGV 226
Query: 175 IFAELL 180
+ E++
Sbjct: 227 LLWEIV 232
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 35/155 (22%)
Query: 125 ICDFGLARVEEPDPNK---AMTQEVVTQYYRAPEILMGA------RHYSAAVDVWSVGCI 175
I DFGL + + + + T +RAPE+L + R + ++D++S+GC+
Sbjct: 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 176 FAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXX 235
F +L + ++ +I + + D KC R
Sbjct: 229 FYYILSKGKHPFGDKYSRESNIIRGIF----------SLDEMKCLHDRSL---------- 268
Query: 236 XXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHP 270
EA L+ QM+ DP KR + L HP
Sbjct: 269 ------IAEATDLISQMIDHDPLKRPTAMKVLRHP 297
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC 391
P+ + Q A+ + +LHS +I+HRD+KP N+LV+++
Sbjct: 117 PISLLRQIAS--GVAHLHSLKIIHRDLKPQNILVSTSS 152
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCI 392
+ L+Y+HS ++H DIKP N+ ++ I
Sbjct: 122 RGLRYIHSMSLVHMDIKPSNIFISRTSI 149
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ Y +KI DFGL+R +E K M + V + A E L Y+ DVWS G
Sbjct: 173 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--WMAIESL-NYSVYTTNSDVWSYGV 229
Query: 175 IFAELL 180
+ E++
Sbjct: 230 LLWEIV 235
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL--LG 181
K+ DFGL+R D + + PE+LM ++ +S+ D+W+ G + E+ LG
Sbjct: 151 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLG 209
Query: 182 R 182
+
Sbjct: 210 K 210
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++E H+F +QL +C ++++YL S + LHRD+ N LVN ++K
Sbjct: 101 LREMRHRFQTQQLLEMCKDVC--------EAMEYLESKQFLHRDLAARNCLVNDQGVVK 151
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC 391
P+ + Q A+ + +LHS +I+HRD+KP N+LV+++
Sbjct: 117 PISLLRQIAS--GVAHLHSLKIIHRDLKPQNILVSTSS 152
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 35/155 (22%)
Query: 125 ICDFGLARVEEPDP---NKAMTQEVVTQYYRAPEILMGA------RHYSAAVDVWSVGCI 175
I DFGL + + + T +RAPE+L + R + ++D++S+GC+
Sbjct: 169 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 176 FAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXX 235
F +L + ++ +I + + D KC R
Sbjct: 229 FYYILSKGKHPFGDKYSRESNIIRGIF----------SLDEMKCLHDRSL---------- 268
Query: 236 XXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHP 270
EA L+ QM+ DP KR + L HP
Sbjct: 269 ------IAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLA-RVEEPDPNKAMTQEVV-TQYYRAPEILMGARH 162
Y+ +P L+ Q ++ DFG A RV K T + T Y AP I++ ++
Sbjct: 164 YRDLKPENLLIDQQGYI--QVTDFGFAKRV------KGRTWXLCGTPEYLAPAIIL-SKG 214
Query: 163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQ 193
Y+ AVD W++G + E+ F A P+Q
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVN 388
+ +YLHS +++RD+KP NLL++
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLID 175
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ Y +KI DFGL+R +E K M + V + A E L Y+ DVWS G
Sbjct: 163 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--WMAIESL-NYSVYTTNSDVWSYGV 219
Query: 175 IFAELL 180
+ E++
Sbjct: 220 LLWEIV 225
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPE-ILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLARV E + A + APE I G ++ DVWS G + E++
Sbjct: 150 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC--FTIKSDVWSFGILLYEIV 205
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCI 392
+ L+Y+HS ++H DIKP N+ ++ I
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFISRTSI 151
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCI 392
+ L+Y+HS ++H DIKP N+ ++ I
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFISRTSI 151
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCI 392
+ L+Y+HS ++H DIKP N+ ++ I
Sbjct: 126 RGLRYIHSMSLVHMDIKPSNIFISRTSI 153
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y H +++HRDIKP NLL+ LK
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELK 154
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y H +++HRDIKP NLL+ LK
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELK 154
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L Y H +++HRDIKP NLL+ LK
Sbjct: 127 ALHYCHERKVIHRDIKPENLLMGYKGELK 155
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 124 KICDFGLAR--VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC-IFAELL 180
KI DFG ++ V P A V T Y APE+L+ + DVWS G ++ L+
Sbjct: 157 KIADFGYSKASVLHSQPKSA----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 181 G 181
G
Sbjct: 213 G 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 200
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 201 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YL S R +HRDI N+LV+SN +K
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVK 151
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 197
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 198 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 231
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YL S R +HRDI N+LV+SN +K
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSNDCVK 148
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 200
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 201 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YL S R +HRDI N+LV+SN +K
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVK 151
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSV 172
VM + KI DFG+ + D +T + T Y APEI+ + Y +VD W+
Sbjct: 152 VMLDSEGHIKIADFGMCKENIWD---GVTTKXFCGTPDYIAPEII-AYQPYGKSVDWWAF 207
Query: 173 GCIFAELLGRRILFQAQS 190
G + E+L + F+ +
Sbjct: 208 GVLLYEMLAGQAPFEGED 225
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 147 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 205
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 206 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 239
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YL S R +HRDI N+LV+SN +K
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSNDCVK 156
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 145 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 203
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 204 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 237
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YL S R +HRDI N+LV+SN +K
Sbjct: 126 ALAYLESKRFVHRDIAARNVLVSSNDCVK 154
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YL S R +HRDI N+LV+SN +K
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVK 531
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 580
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 581 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YL S R +HRDI N+LV+SN +K
Sbjct: 125 ALAYLESKRFVHRDIAARNVLVSSNDCVK 153
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
V+ + K+ DFGL+R E ++ + + APE + R +++A DVW G
Sbjct: 144 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGV 202
Query: 175 IFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTP 207
E+L + FQ +G I + P P
Sbjct: 203 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 236
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVG 173
VM + KI DFG+ + D T+E T Y APEI+ + Y +VD W+ G
Sbjct: 151 VMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYIAPEII-AYQPYGKSVDWWAYG 207
Query: 174 CIFAELLGRRILFQAQS 190
+ E+L + F +
Sbjct: 208 VLLYEMLAGQPPFDGED 224
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L YL S R +HRDI N+LV+SN +K
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSNDCVK 179
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGL+R E ++ + + APE + R +++A DVW G E+L
Sbjct: 179 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHG 237
Query: 184 IL-FQAQSPVQQLGLITDLLGTPTP 207
+ FQ +G I + P P
Sbjct: 238 VKPFQGVKNNDVIGRIENGERLPMP 262
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVN 388
P+ + Q+ + L +LHS I+HRD+KP N+L++
Sbjct: 120 PITLLQQTTS--GLAHLHSLNIVHRDLKPHNILIS 152
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 124 KICDFGLARV--EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA+ E + + ++ APE L + Y A+ DVWS G ELL
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYAS-DVWSFGVTLYELL 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 116 MYQATYSSKICDFGLAR---VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
M ++ K+ DFGLAR +E D T + + A E L + ++ DVWS
Sbjct: 166 MLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSF 224
Query: 173 GCIFAELLGR 182
G + EL+ R
Sbjct: 225 GVLLWELMTR 234
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 156 KVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 210
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 118 QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA-------RHYSAAVDVW 170
Q+ Y K+ DFG AR E D + T+ Y P++ A + Y A VD+W
Sbjct: 152 QSVY--KLTDFGAARELEDD--EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLW 207
Query: 171 SVGCIF 176
S+G F
Sbjct: 208 SIGVTF 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 149 KVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 203
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ L +LH +++HRDIK N+L+ N +K
Sbjct: 139 LRGLSHLHQHKVIHRDIKGQNVLLTENAEVK 169
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 124 KICDFGLARV--EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA+ E + + ++ APE L + Y A+ DVWS G ELL
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYELL 231
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 116 MYQATYSSKICDFGLAR---VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
M ++ K+ DFGLAR +E D T + + A E L + ++ DVWS
Sbjct: 166 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSF 224
Query: 173 GCIFAELLGR 182
G + EL+ R
Sbjct: 225 GVLLWELMTR 234
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 149 KVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 203
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 124 KICDFGLARV--EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA+ E + + ++ APE L + Y A+ DVWS G ELL
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYAS-DVWSFGVTLYELL 208
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 60/165 (36%), Gaps = 50/165 (30%)
Query: 124 KICDFGLARVEEPDPNKAMTQ-EVVTQYYRAPEIL--MGARHYSAAV--------DVWSV 172
K+ DFG+A +PD + +V T Y PE + M + + DVWS+
Sbjct: 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 173 GCIFAEL-LGRRILFQAQSPVQQLGLITD----LLGTPTPEEMRHACDGAKCHMLRQTRK 227
GCI + G+ Q + + +L I D + PE + D KC + R
Sbjct: 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKR---- 279
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
DP +RIS+ L HPY+
Sbjct: 280 ----------------------------DPKQRISIPELLAHPYV 296
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
K+ DFG+ + E N T T Y APEIL Y AVD W++G + E+L
Sbjct: 164 KLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQ-EMLYGPAVDWWAMGVLLYEMLCG 220
Query: 183 RILFQAQS 190
F+A++
Sbjct: 221 HAPFEAEN 228
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 116 MYQATYSSKICDFGLAR---VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
M ++ K+ DFGLAR +E D T + + A E L + ++ DVWS
Sbjct: 170 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSF 228
Query: 173 GCIFAELLGR 182
G + EL+ R
Sbjct: 229 GVLLWELMTR 238
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 152 KVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 206
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 116 MYQATYSSKICDFGLAR---VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
M ++ K+ DFGLAR +E D T + + A E L + ++ DVWS
Sbjct: 163 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSF 221
Query: 173 GCIFAELLGR 182
G + EL+ R
Sbjct: 222 GVLLWELMTR 231
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 358 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 412
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
++E H+F +QL +C ++++YL S + LHRD+ N LVN ++K
Sbjct: 95 LREMRHRFQTQQLLEMCKDVC--------EAMEYLESKQFLHRDLAARNCLVNDQGVVK 145
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 116 MYQATYSSKICDFGLAR---VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
M ++ K+ DFGLAR +E D T + + A E L + ++ DVWS
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSF 223
Query: 173 GCIFAELLGR 182
G + EL+ R
Sbjct: 224 GVLLWELMTR 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 116 MYQATYSSKICDFGLAR---VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
M ++ K+ DFGLAR +E D T + + A E L + ++ DVWS
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSF 223
Query: 173 GCIFAELLGR 182
G + EL+ R
Sbjct: 224 GVLLWELMTR 233
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 118 QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA-------RHYSAAVDVW 170
Q+ Y K+ DFG AR E D + T+ Y P++ A + Y A VD+W
Sbjct: 152 QSVY--KLTDFGAARELEDD--EQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLW 207
Query: 171 SVGCIF 176
S+G F
Sbjct: 208 SIGVTF 213
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 60/165 (36%), Gaps = 50/165 (30%)
Query: 124 KICDFGLARVEEPDPNKAMTQ-EVVTQYYRAPEIL--MGARHYSAAV--------DVWSV 172
K+ DFG+A +PD + +V T Y PE + M + + DVWS+
Sbjct: 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206
Query: 173 GCIFAEL-LGRRILFQAQSPVQQLGLITD----LLGTPTPEEMRHACDGAKCHMLRQTRK 227
GCI + G+ Q + + +L I D + PE + D KC + R
Sbjct: 207 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKR---- 260
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
DP +RIS+ L HPY+
Sbjct: 261 ----------------------------DPKQRISIPELLAHPYV 277
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 355 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 409
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 397 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 451
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 60/165 (36%), Gaps = 50/165 (30%)
Query: 124 KICDFGLARVEEPDPNKAMTQ-EVVTQYYRAPEIL--MGARHYSAAV--------DVWSV 172
K+ DFG+A +PD + +V T Y PE + M + + DVWS+
Sbjct: 150 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 209
Query: 173 GCIFAEL-LGRRILFQAQSPVQQLGLITD----LLGTPTPEEMRHACDGAKCHMLRQTRK 227
GCI + G+ Q + + +L I D + PE + D KC + R
Sbjct: 210 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKR---- 263
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
DP +RIS+ L HPY+
Sbjct: 264 ----------------------------DPKQRISIPELLAHPYV 280
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 23/159 (14%)
Query: 124 KICDFGLARVEE--PDPNKAMTQEVVT----QYYRAPEILMG----ARHYSAAVDVWSVG 173
KICDFGL + D + T E++T Y APE++ A Y D+WS+G
Sbjct: 154 KICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG 213
Query: 174 CIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXX 233
I LL F + G+ + AC + +ML ++ +
Sbjct: 214 VILYILLSGYPPFVGRC------------GSDCGWDRGEACPACQ-NMLFESIQEGKYEF 260
Query: 234 XXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ A L+ ++L D +R+S L HP++
Sbjct: 261 PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 366 SLKYLHSARILHRDIKPGNLL 386
+L +LH+ I HRD+KP N+L
Sbjct: 123 ALDFLHNKGIAHRDLKPENIL 143
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 12/70 (17%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMT-----QEVVTQYYRAPEILMGARHYSAAVDV 169
++ Y+ K+CDFGL+R+ KA T T + APE+L + DV
Sbjct: 170 LLVDKKYTVKVCDFGLSRL------KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS-DV 222
Query: 170 WSVGCIFAEL 179
+S G I EL
Sbjct: 223 YSFGVILWEL 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 124 KICDFGLARV--EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA+ E + + ++ APE L + Y A+ DVWS G ELL
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 210
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 124 KICDFGLARV--EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLA+ E + + ++ APE L + Y A+ DVWS G ELL
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 210
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 153 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 207
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 60/165 (36%), Gaps = 50/165 (30%)
Query: 124 KICDFGLARVEEPDPNKAMTQ-EVVTQYYRAPEIL--MGARHYSAAV--------DVWSV 172
K+ DFG+A +PD + +V T Y PE + M + + DVWS+
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 173 GCIFAEL-LGRRILFQAQSPVQQLGLITD----LLGTPTPEEMRHACDGAKCHMLRQTRK 227
GCI + G+ Q + + +L I D + PE + D KC + R
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKR---- 307
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
DP +RIS+ L HPY+
Sbjct: 308 ----------------------------DPKQRISIPELLAHPYV 324
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 124 KICDFGLARVEEPDPNKAMTQ-EVVTQYYRAPEIL--MGARHYSAAV--------DVWSV 172
K+ DFG+A +PD + +V T Y PE + M + + DVWS+
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 173 GCIFAELLGRRILFQ 187
GCI + + FQ
Sbjct: 254 GCILYYMTYGKTPFQ 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 164 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 155 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 205
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L +HS ++HRD+KP N+L++ + LK
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLK 214
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM---GARHYSAAVDVWSVGCIFAELL 180
K+ DFG + V T Y +PE+L G +Y D WSVG E+L
Sbjct: 214 KLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
Query: 181 GRRILFQAQSPVQQLGLITD 200
F A S V I D
Sbjct: 274 VGDTPFYADSLVGTYSKIMD 293
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 116 MYQATYSSKICDFGLAR---VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
M ++ K+ DFGLAR +E D T + + A E L + ++ DVWS
Sbjct: 224 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSF 282
Query: 173 GCIFAELLGR 182
G + EL+ R
Sbjct: 283 GVLLWELMTR 292
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 210
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 60/165 (36%), Gaps = 50/165 (30%)
Query: 124 KICDFGLARVEEPDPNKAMTQ-EVVTQYYRAPEIL--MGARHYSAAV--------DVWSV 172
K+ DFG+A +PD + +V T Y PE + M + + DVWS+
Sbjct: 146 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 205
Query: 173 GCIFAEL-LGRRILFQAQSPVQQLGLITD----LLGTPTPEEMRHACDGAKCHMLRQTRK 227
GCI + G+ Q + + +L I D + PE + D KC + R
Sbjct: 206 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKR---- 259
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
DP +RIS+ L HPY+
Sbjct: 260 ----------------------------DPKQRISIPELLAHPYV 276
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 153 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 207
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 338 EEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVN 388
E++ F + + + V L + + ++Y+HS +HRD+KP N L+
Sbjct: 90 EDLFNFCSRKFSLKTVLLLADQMIS---RIEYIHSKNFIHRDVKPDNFLMG 137
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 338 EEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVN 388
E++ F + + + V L + + ++Y+HS +HRD+KP N L+
Sbjct: 92 EDLFNFCSRKFSLKTVLLLADQMIS---RIEYIHSKNFIHRDVKPDNFLMG 139
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 60/165 (36%), Gaps = 50/165 (30%)
Query: 124 KICDFGLARVEEPDPNKAMTQ-EVVTQYYRAPEIL--MGARHYSAAV--------DVWSV 172
K+ DFG+A +PD + +V T Y PE + M + + DVWS+
Sbjct: 166 KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 173 GCIFAEL-LGRRILFQAQSPVQQLGLITD----LLGTPTPEEMRHACDGAKCHMLRQTRK 227
GCI + G+ Q + + +L I D + PE + D KC + R
Sbjct: 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKR---- 279
Query: 228 XXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
DP +RIS+ L HPY+
Sbjct: 280 ----------------------------DPKQRISIPELLAHPYV 296
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 149 KVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 203
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 338 EEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVN 388
E++ F + + + V L + + ++Y+HS +HRD+KP N L+
Sbjct: 92 EDLFNFCSRKFSLKTVLLLADQMIS---RIEYIHSKNFIHRDVKPDNFLMG 139
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 170 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNTFSIKSDVWAFGVLLWEI 224
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 336 VKEEMHKFIAEQLNTSRVPL----CINPQSAAFKSLKYLHSAR-ILHRDIKPGNLLVNSN 390
+K + + F+ ++ T +P+ CI + S Y+H+ + I HRD+KP N+L++ N
Sbjct: 131 LKFDEYFFVLDKNYTCFIPIQVIKCI--IKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 338 EEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVN 388
E++ F + +L+ V + + ++++HS LHRDIKP N L+
Sbjct: 90 EDLFNFCSRKLSLKTVLMLAD---QMINRVEFVHSKSFLHRDIKPDNFLMG 137
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L +HS +HRD+KP N+L++ + LK
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLK 213
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM---GARHYSAAVDVWSVGCIFAELL 180
K+ DFG + V T Y +PE+L G +Y D WSVG E+L
Sbjct: 213 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
Query: 181 GRRILFQAQSPV 192
F A S V
Sbjct: 273 VGDTPFYADSLV 284
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
V+ ++ KI DFGLAR+ + D + A +V ++ IL R ++ DVWS
Sbjct: 150 VLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL--RRRFTHQSDVWSY 207
Query: 173 GCIFAELL 180
G EL+
Sbjct: 208 GVTVWELM 215
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNS 389
K + YL R++HRD+ N+LV S
Sbjct: 130 KGMSYLEDVRLVHRDLAARNVLVKS 154
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 153 KVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
K+ DFGL+R+ D A + APE L +S DVW+ G + E+
Sbjct: 152 KVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL-AYNKFSIKSDVWAFGVLLWEI 206
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 115 VMYQATYSS--KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARH--YSAAVDVW 170
++YQ SS KI +FG AR +P N + +YY APE+ +H S A D+W
Sbjct: 133 IIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF-TAPEYY-APEV---HQHDVVSTATDMW 187
Query: 171 SVGCIFAELLG 181
S+G + LL
Sbjct: 188 SLGTLVYVLLS 198
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 344 IAEQLNTSRVPL----CINPQSAAFKSLKYLHSARILHRDIKPGNLL 386
I E++NTS L ++ ++L++LHS I H DI+P N++
Sbjct: 88 IFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENII 134
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L +HS +HRD+KP N+L++ + LK
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKSGHLK 208
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM---GARHYSAAVDVWSVGCIFAELL 180
K+ DFG + V T Y +PE+L G +Y D WSVG E+L
Sbjct: 208 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
Query: 181 GRRILFQAQSPV 192
F A S V
Sbjct: 268 VGDTPFYADSLV 279
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 124 KICDFGLAR--VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC-IFAELL 180
KIC FG ++ V P V T Y APE+L+ + DVWS G ++ L+
Sbjct: 157 KICAFGYSKSSVLHSQPKST----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 181 G 181
G
Sbjct: 213 G 213
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
+L +HS +HRD+KP N+L++ + LK
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLK 213
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM---GARHYSAAVDVWSVGCIFAELL 180
K+ DFG + V T Y +PE+L G +Y D WSVG E+L
Sbjct: 213 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
Query: 181 GRRILFQAQSPV 192
F A S V
Sbjct: 273 VGDTPFYADSLV 284
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 124 KICDFGLAR--VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC-IFAELL 180
KIC FG ++ V P V T Y APE+L+ + DVWS G ++ L+
Sbjct: 157 KICAFGYSKSSVLHSQPKDT----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 181 G 181
G
Sbjct: 213 G 213
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVK 160
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNS 389
+L +LH+ I HRD+KP N+L S
Sbjct: 123 ALDFLHTKGIAHRDLKPENILCES 146
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPE-ILMGARHYSAAVDVWSVGCIFAELL 180
KI DFGLARV E + A + APE I G ++ +VWS G + E++
Sbjct: 149 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC--FTIKSNVWSFGILLYEIV 204
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVK 160
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 119 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVK 148
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 149
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 172
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 135 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 164
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 172
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 149
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 142 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 171
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ Y+ K+CDFGL+R++ T + APE+L + DV+S G
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKA-SXFLXSKXAAGTPEWMAPEVLRDEPSNEKS-DVYSFGV 227
Query: 175 IFAEL 179
I EL
Sbjct: 228 ILWEL 232
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 365 KSLKYLHSAR--ILHRDIKPGNLLVNSNCILK 394
K + YLH+ I+HRD+K NLLV+ +K
Sbjct: 148 KGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVK 179
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ + +K
Sbjct: 117 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 146
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ + YLH+ I+HRD+K N+ ++ +K
Sbjct: 143 QGMDYLHAKNIIHRDMKSNNIFLHEGLTVK 172
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYL-HSARILHRDIKPGNLLVNSNCILK 394
A K+L +L + +I+HRDIKP N+L++ + +K
Sbjct: 133 ATVKALNHLKENLKIIHRDIKPSNILLDRSGNIK 166
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL---MGARHYSAAVDVWSVGCIFAELL 180
K+CDFG++ + + A T++ + Y APE + + Y DVWS+G EL
Sbjct: 166 KLCDFGISG--QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA 223
Query: 181 GRRI 184
R
Sbjct: 224 TGRF 227
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 365 KSLKYLHSARILHRDIKPGNLL 386
+L Y HS ++H+D+KP N+L
Sbjct: 135 NALAYFHSQHVVHKDLKPENIL 156
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA E + T + APEI + D+WS+G I LL
Sbjct: 159 KLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 215
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH----MLRQTRK 227
F + + L IT + E H + AK ++++TRK
Sbjct: 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRK 263
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA E + T + APEI + D+WS+G I LL
Sbjct: 159 KLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 215
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH----MLRQTRK 227
F + + L IT + E H + AK ++++TRK
Sbjct: 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRK 263
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
++YL +HRD+ N+LVNSN + K
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVCK 156
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
K+ DFGLA E + T + APEI + D+WS+G I LL
Sbjct: 159 KLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGA 215
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH----MLRQTRK 227
F + + L IT + E H + AK ++++TRK
Sbjct: 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRK 263
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
++YL +HRD+ N+LVNSN + K
Sbjct: 130 GMRYLAEMSYVHRDLAARNILVNSNLVCK 158
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVT--QYYRAPEILMGARHYSAAVDVWSV 172
V+ ++ ++ DFG+A + PD + + E T ++ I G Y+ DVWS
Sbjct: 164 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK--YTHQSDVWSY 221
Query: 173 GCIFAELL 180
G EL+
Sbjct: 222 GVTVWELM 229
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 168 RGMEYLASQKCIHRDLAARNVLVTENNVMK 197
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 168 RGMEYLASQKCIHRDLAARNVLVTENNVMK 197
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 168 RGMEYLASQKCIHRDLAARNVLVTENNVMK 197
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ A + + DFG+A + + V T YY APE H + D++++ C
Sbjct: 165 ILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPE-RFSESHATYRADIYALTC 223
Query: 175 IFAELL 180
+ E L
Sbjct: 224 VLYECL 229
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 160 RGMEYLASQKCIHRDLAARNVLVTENNVMK 189
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVT--QYYRAPEILMGARHYSAAVDVWSV 172
V+ ++ ++ DFG+A + PD + + E T ++ I G Y+ DVWS
Sbjct: 146 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK--YTHQSDVWSY 203
Query: 173 GCIFAELL 180
G EL+
Sbjct: 204 GVTVWELM 211
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 168 RGMEYLASQKCIHRDLAARNVLVTENNVMK 197
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 168 RGMEYLASQKCIHRDLAARNVLVTENNVMK 197
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 168 RGMEYLASQKCIHRDLAARNVLVTENNVMK 197
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 168 RGMEYLASQKCIHRDLAARNVLVTENNVMK 197
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 168 RGMEYLASQKCIHRDLAARNVLVTENNVMK 197
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 214 RGMEYLASQKCIHRDLAARNVLVTENNVMK 243
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N ++K
Sbjct: 157 RGMEYLASQKCIHRDLAARNVLVTENNVMK 186
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 124 KICDFGLARVEEPDPNKAMTQ-EVVTQYYRAPEIL--MGARHYSAAV--------DVWSV 172
K+ DFG+A +PD + +V Y PE + M + + DVWS+
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 173 GCIFAELLGRRILFQ 187
GCI + + FQ
Sbjct: 254 GCILYYMTYGKTPFQ 268
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN 390
P I + L++LH I++RD+KP N+L++ +
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN 390
P I + L++LH I++RD+KP N+L++ +
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN 390
P I + L++LH I++RD+KP N+L++ +
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN 390
P I + L++LH I++RD+KP N+L++ +
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 367 LKYLHSARILHRDIKPGNLLVN 388
++Y+HS +++RD+KP N L+
Sbjct: 110 MEYVHSKNLIYRDVKPENFLIG 131
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 367 LKYLHSARILHRDIKPGNLLVN 388
++Y+HS +++RD+KP N L+
Sbjct: 139 MEYVHSKNLIYRDVKPENFLIG 160
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
++ ++ K+ DFG A E K T Y APE+LMG + +++WS+G
Sbjct: 161 IVIAEDFTIKLIDFGSAAYLER--GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGV 218
Query: 175 IFAELL 180
L+
Sbjct: 219 TLYTLV 224
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 367 LKYLHSARILHRDIKPGNLLVN 388
++Y+HS +++RD+KP N L+
Sbjct: 118 MEYVHSKNLIYRDVKPENFLIG 139
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 367 LKYLHSARILHRDIKPGNLLVN 388
++Y+HS +++RD+KP N L+
Sbjct: 118 MEYVHSKNLIYRDVKPENFLIG 139
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLV 387
+ YLHS RI H D+KP N+++
Sbjct: 127 GVHYLHSKRIAHFDLKPENIML 148
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNS 389
+ + YLH I+H D+KP N+L++S
Sbjct: 141 LEGVYYLHQNNIVHLDLKPQNILLSS 166
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLV 387
+ YLHS RI H D+KP N+++
Sbjct: 141 GVHYLHSKRIAHFDLKPENIML 162
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 366 SLKYLHSARILHRDIKPGNLLV 387
+ YLHS RI H D+KP N+++
Sbjct: 120 GVHYLHSKRIAHFDLKPENIML 141
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 366 SLKYLHSARILHRDIKPGNLL 386
+L +LH+ I HRD+KP N+L
Sbjct: 123 ALDFLHNKGIAHRDLKPENIL 143
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 23/159 (14%)
Query: 124 KICDFGLARVEE--PDPNKAMTQEVVT----QYYRAPEILMG----ARHYSAAVDVWSVG 173
KICDF L + D + T E++T Y APE++ A Y D+WS+G
Sbjct: 154 KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG 213
Query: 174 CIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXX 233
I LL F + G+ + AC + +ML ++ +
Sbjct: 214 VILYILLSGYPPFVGRC------------GSDCGWDRGEACPACQ-NMLFESIQEGKYEF 260
Query: 234 XXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
+ A L+ ++L D +R+S L HP++
Sbjct: 261 PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLN 146
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLN 149
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLN 146
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLN 146
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLN 150
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLN 151
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLN 150
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLN 166
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLN 165
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLN 151
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLN 166
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLN 166
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLN 165
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLN 173
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLN 185
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLN 151
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLN 193
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN 179
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLN 193
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN 179
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN 178
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN 178
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV N +++
Sbjct: 168 RGMEYLASQKCIHRDLAARNVLVTENNVMR 197
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN 178
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN 179
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN 178
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN 179
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 367 LKYLHSARILHRDIKPGNLLVN 388
++Y+H+ +++RD+KP N LV
Sbjct: 113 MEYVHTKSLIYRDVKPENFLVG 134
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLN 193
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
+++++ H+ +LHRDIK N+L++ N
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLN 198
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 362 AAFKSLKYLHSAR-ILHRDIKPGNLLVNSNCILK 394
A K+L YL ++HRD+KP N+L++ +K
Sbjct: 132 AIVKALYYLKEKHGVIHRDVKPSNILLDERGQIK 165
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 350 TSRVPLCINPQSAAFK----SLKYLHSARILHRDIKPGNLLVN 388
T + PL P F ++++ HS ++HRDIK N+L++
Sbjct: 131 TEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID 173
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 366 SLKYLHSARILHRDIKPGN 384
+L Y H +++HRDIKP N
Sbjct: 135 ALMYCHGKKVIHRDIKPEN 153
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 148 TQYYRAPEILMGARH--YSAAVDVWSVGCI-FAELLG 181
T YRAPE+ H DVWS+GC+ +A + G
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 367 LKYLHSARILHRDIKPGNLLVN 388
L+Y+H +H DIK NLL+N
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLN 186
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV + ++K
Sbjct: 161 RGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV + ++K
Sbjct: 153 RGMEYLASKKCIHRDLAARNVLVTEDNVMK 182
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV + ++K
Sbjct: 161 RGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV + ++K
Sbjct: 154 RGMEYLASKKCIHRDLAARNVLVTEDNVMK 183
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV + ++K
Sbjct: 150 RGMEYLASKKCIHRDLAARNVLVTEDNVMK 179
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV + ++K
Sbjct: 161 RGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV + ++K
Sbjct: 146 RGMEYLASKKCIHRDLAARNVLVTEDNVMK 175
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV + ++K
Sbjct: 202 RGMEYLASKKCIHRDLAARNVLVTEDNVMK 231
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
+ ++YL S + +HRD+ N+LV + ++K
Sbjct: 161 RGMEYLASKKCIHRDLAARNVLVTEDNVMK 190
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 367 LKYLHSARILHRDIKPGNLLVN 388
L+Y+H +H DIK NLL+N
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLN 186
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 367 LKYLHSARILHRDIKPGNLLVN 388
L+Y+H +H DIK NLL+N
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLN 186
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.134 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,098,787
Number of Sequences: 62578
Number of extensions: 271388
Number of successful extensions: 3067
Number of sequences better than 100.0: 920
Number of HSP's better than 100.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 1102
Number of HSP's gapped (non-prelim): 1918
length of query: 395
length of database: 14,973,337
effective HSP length: 101
effective length of query: 294
effective length of database: 8,652,959
effective search space: 2543969946
effective search space used: 2543969946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)