Query psy2868
Match_columns 289
No_of_seqs 80 out of 82
Neff 2.7
Searched_HMMs 13730
Date Fri Aug 16 18:57:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2868.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2868hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wt8a1 g.3.7.2 (A:1-31) Bmkx 32.3 4.8 0.00035 24.8 0.2 8 282-289 8-15 (31)
2 d1qkia2 d.81.1.5 (A:200-434,A: 7.1 59 0.0043 27.6 0.8 11 102-112 58-68 (297)
3 d1h9aa2 d.81.1.5 (A:182-412,A: 6.5 66 0.0048 27.0 0.8 11 102-112 53-63 (290)
4 d3dbya2 a.29.13.1 (A:126-260) 5.4 1.4E+02 0.01 22.3 2.1 23 92-114 2-24 (135)
5 d1mb6a_ g.3.6.2 (A:) Huwentoxi 4.7 1E+02 0.0074 19.1 0.6 15 248-262 21-35 (35)
6 d1x4la1 g.39.1.3 (A:8-36) Four 4.3 89 0.0065 18.8 0.1 9 255-263 14-22 (29)
7 d1x68a1 g.39.1.3 (A:8-36) Four 3.7 1.2E+02 0.0089 18.2 0.4 9 255-263 14-22 (29)
8 d1yq9h1 e.18.1.1 (H:7-536) Nic 3.2 3.2E+02 0.024 23.0 2.8 28 255-283 447-474 (530)
9 d1xb2b3 d.43.1.1 (B:223-331) E 3.0 2.4E+02 0.017 20.1 1.5 12 252-263 96-107 (109)
10 d2adra1 g.37.1.1 (A:102-130) A 2.9 1.4E+02 0.01 16.9 0.0 14 28-41 13-26 (29)
No 1
>d1wt8a1 g.3.7.2 (A:1-31) Bmkx {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]}
Probab=32.29 E-value=4.8 Score=24.78 Aligned_cols=8 Identities=75% Similarity=1.311 Sum_probs=6.6
Q ss_pred ccccccCC
Q psy2868 282 NTDRDCKM 289 (289)
Q Consensus 282 ~~~~~~~~ 289 (289)
.|||||-|
T Consensus 8 ktdrdcvm 15 (31)
T d1wt8a1 8 KTDRDCVM 15 (31)
T ss_dssp SSGGGGGG
T ss_pred ccCcceEE
Confidence 58999976
No 2
>d1qkia2 d.81.1.5 (A:200-434,A:450-511) Glucose 6-phosphate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.07 E-value=59 Score=27.59 Aligned_cols=11 Identities=36% Similarity=0.724 Sum_probs=5.8
Q ss_pred HHHhhhhHHHH
Q psy2868 102 LHMLQNHLFTL 112 (289)
Q Consensus 102 ~~~~~~~~~~~ 112 (289)
-.|+||||+.|
T Consensus 58 RDmvQNHllQl 68 (297)
T d1qkia2 58 RDVMQNHLLQM 68 (297)
T ss_dssp HHTTTTHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34555555544
No 3
>d1h9aa2 d.81.1.5 (A:182-412,A:427-485) Glucose 6-phosphate dehydrogenase {Leuconostoc mesenteroides [TaxId: 1245]}
Probab=6.45 E-value=66 Score=27.00 Aligned_cols=11 Identities=45% Similarity=0.821 Sum_probs=5.8
Q ss_pred HHHhhhhHHHH
Q psy2868 102 LHMLQNHLFTL 112 (289)
Q Consensus 102 ~~~~~~~~~~~ 112 (289)
-.|+||||+.|
T Consensus 53 RDmvQNHLlQl 63 (290)
T d1h9aa2 53 LDMIQNHTMQI 63 (290)
T ss_dssp HHTTTTHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34556655543
No 4
>d3dbya2 a.29.13.1 (A:126-260) Uncharacterized protein BCE_G9241_0798 {Bacillus cereus [TaxId: 1396]}
Probab=5.41 E-value=1.4e+02 Score=22.35 Aligned_cols=23 Identities=26% Similarity=0.224 Sum_probs=19.0
Q ss_pred HHHhhhhHHHHHHhhhhHHHHhh
Q psy2868 92 IHMLQNHLFTLHMLQNHLFTLHM 114 (289)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~ 114 (289)
+|+|..|+|-+..+..|...+.-
T Consensus 2 ~~~l~~hlFWlrim~eHA~FI~~ 24 (135)
T d3dbya2 2 FHELHYHLVWLTDAAGHAGSISG 24 (135)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999876654
No 5
>d1mb6a_ g.3.6.2 (A:) Huwentoxin-IV {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]}
Probab=4.70 E-value=1e+02 Score=19.13 Aligned_cols=15 Identities=47% Similarity=0.736 Sum_probs=12.5
Q ss_pred ceeeeeeeeeeeeee
Q psy2868 248 PLHISHVTRWVSYLI 262 (289)
Q Consensus 248 Pl~~s~~~r~v~~~~ 262 (289)
=|+-|.-+||-.|+|
T Consensus 21 ~lvcsrk~rwckyqi 35 (35)
T d1mb6a_ 21 KLVCSRKTRWCKYQI 35 (35)
T ss_dssp TEEEETTTTEEEECC
T ss_pred ceeEeccccceeecC
Confidence 478888999999975
No 6
>d1x4la1 g.39.1.3 (A:8-36) Four and a half LIM domains protein 2, FHL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.28 E-value=89 Score=18.82 Aligned_cols=9 Identities=22% Similarity=0.460 Sum_probs=6.7
Q ss_pred eeeeeeeec
Q psy2868 255 TRWVSYLIY 263 (289)
Q Consensus 255 ~r~v~~~~~ 263 (289)
++|||||+-
T Consensus 14 ~kyisFE~R 22 (29)
T d1x4la1 14 TKYISFEER 22 (29)
T ss_dssp CSCEECSSC
T ss_pred ceEEEeecc
Confidence 578888863
No 7
>d1x68a1 g.39.1.3 (A:8-36) Four and a half LIM domains protein 5, FHL-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.69 E-value=1.2e+02 Score=18.17 Aligned_cols=9 Identities=0% Similarity=0.294 Sum_probs=6.6
Q ss_pred eeeeeeeec
Q psy2868 255 TRWVSYLIY 263 (289)
Q Consensus 255 ~r~v~~~~~ 263 (289)
+||+|||+.
T Consensus 14 ~k~isFedR 22 (29)
T d1x68a1 14 AKFICFQDS 22 (29)
T ss_dssp CCEEEETTE
T ss_pred ceEEEeehh
Confidence 588888763
No 8
>d1yq9h1 e.18.1.1 (H:7-536) Nickel-iron hydrogenase, large subunit {Desulfovibrio gigas [TaxId: 879]}
Probab=3.16 E-value=3.2e+02 Score=23.03 Aligned_cols=28 Identities=32% Similarity=0.419 Sum_probs=21.0
Q ss_pred eeeeeeeeccceeeeeehhhhcccccccc
Q psy2868 255 TRWVSYLIYPLLTLKIHKTIQKSGEIENT 283 (289)
Q Consensus 255 ~r~v~~~~~pl~~~~~~~~~~~~~~~~~~ 283 (289)
-+=+.+-|.|-|+| +|-...+.|.|+|-
T Consensus 447 GeG~G~vEApRG~L-~H~~~~~~G~I~~~ 474 (530)
T d1yq9h1 447 SQGVGFVNAPRGML-SHWIVQRGGKIENF 474 (530)
T ss_dssp EEEEEEEEETTEEE-EEEEEEETTEEEEE
T ss_pred eEEEEEEECCCccE-EEEEEECCCEEEEE
Confidence 34567789999988 77666788888763
No 9
>d1xb2b3 d.43.1.1 (B:223-331) Elongation factor Ts (EF-Ts), dimerisation domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=3.02 E-value=2.4e+02 Score=20.12 Aligned_cols=12 Identities=17% Similarity=0.166 Sum_probs=9.3
Q ss_pred eeeeeeeeeeec
Q psy2868 252 SHVTRWVSYLIY 263 (289)
Q Consensus 252 s~~~r~v~~~~~ 263 (289)
..|.||+.|+.|
T Consensus 96 i~v~~F~Rf~vG 107 (109)
T d1xb2b3 96 VSVVDFVRFECG 107 (109)
T ss_dssp CEEEEEEEEETT
T ss_pred CEEEEEEEEEec
Confidence 468888888876
No 10
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=2.85 E-value=1.4e+02 Score=16.93 Aligned_cols=14 Identities=21% Similarity=0.394 Sum_probs=10.0
Q ss_pred chHHHhhhcccccc
Q psy2868 28 SHIHMLQNHLFTHS 41 (289)
Q Consensus 28 ~~~~~~~~~~~~~~ 41 (289)
+....|++|+.+|+
T Consensus 13 ~~~~~L~~H~r~HT 26 (29)
T d2adra1 13 ARQEHLKRHYRSHT 26 (29)
T ss_dssp SCHHHHHHHHHTTT
T ss_pred CCchHcccccCccc
Confidence 34556888888886
Done!