BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2869
(352 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P40301|PSA2_DROME Proteasome subunit alpha type-2 OS=Drosophila melanogaster
GN=Pros25 PE=1 SV=1
Length = 234
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/220 (79%), Positives = 197/220 (89%), Gaps = 1/220 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED-CIHKVEPITDYIGM 59
PSGKLVQ+EYALAAV GAPSVGI ASNG+V+ATE K K+ L+E +H+VE I ++IGM
Sbjct: 15 PSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGM 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPDYRLLVK+ARKIAQ Y L Y+E IP QLVQRVA +MQEYTQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LICGWDN RPYLYQ DPSGAYFAWKATAMG+N VNGKTFLEKRYSEDLELDDAVHTAILT
Sbjct: 135 LICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILT 194
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNIP 219
LKEGFEG+MTA+NIEIGI D+NGF+RLD A+++D+L++IP
Sbjct: 195 LKEGFEGKMTADNIEIGICDQNGFQRLDPASIKDYLASIP 234
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 68/75 (90%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E IP QLVQRVA +MQEYTQSGGVRPFGVSLLICGWDN RPYLYQ DPSGAYFAWKATA
Sbjct: 103 EPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATA 162
Query: 320 MGRNYVNGKTFLEKR 334
MG+N VNGKTFLEKR
Sbjct: 163 MGKNAVNGKTFLEKR 177
>sp|P17220|PSA2_RAT Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1
SV=3
Length = 234
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/219 (79%), Positives = 197/219 (89%), Gaps = 1/219 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV GAPSVGIKA+NG+VLATEKKQK+IL+ E +HKVEPIT +IG+
Sbjct: 15 PSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGL 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPDYR+LV +ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LICGW+ RPYL+Q DPSGAYFAWKATAMG+NYVNGKTFLEKRY+EDLEL+DA+HTAILT
Sbjct: 135 LICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNI 218
LKE FEGQMT +NIE+GI +E GFRRL VRD+L+ I
Sbjct: 195 LKESFEGQMTEDNIEVGICNEAGFRRLTPTEVRDYLAAI 233
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 71/78 (91%)
Query: 257 VATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWK 316
V E IPT QLVQRVA++MQEYTQSGGVRPFGVSLLICGW+ RPYL+Q DPSGAYFAWK
Sbjct: 100 VYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWK 159
Query: 317 ATAMGRNYVNGKTFLEKR 334
ATAMG+NYVNGKTFLEKR
Sbjct: 160 ATAMGKNYVNGKTFLEKR 177
>sp|P49722|PSA2_MOUSE Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=3
Length = 234
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/219 (79%), Positives = 197/219 (89%), Gaps = 1/219 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV GAPSVGIKA+NG+VLATEKKQK+IL+ E +HKVEPIT +IG+
Sbjct: 15 PSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGL 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPDYR+LV +ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LICGW+ RPYL+Q DPSGAYFAWKATAMG+NYVNGKTFLEKRY+EDLEL+DA+HTAILT
Sbjct: 135 LICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNI 218
LKE FEGQMT +NIE+GI +E GFRRL VRD+L+ I
Sbjct: 195 LKESFEGQMTEDNIEVGICNEAGFRRLTPTEVRDYLAAI 233
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 71/78 (91%)
Query: 257 VATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWK 316
V E IPT QLVQRVA++MQEYTQSGGVRPFGVSLLICGW+ RPYL+Q DPSGAYFAWK
Sbjct: 100 VYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWK 159
Query: 317 ATAMGRNYVNGKTFLEKR 334
ATAMG+NYVNGKTFLEKR
Sbjct: 160 ATAMGKNYVNGKTFLEKR 177
>sp|P25787|PSA2_HUMAN Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2
Length = 234
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/219 (78%), Positives = 197/219 (89%), Gaps = 1/219 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV GAPSVGIKA+NG+VLATEKKQK+IL+ E +HKVEPIT +IG+
Sbjct: 15 PSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGL 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPDYR+LV +ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LICGW+ RPYL+Q DPSGAYFAWKATAMG+NYVNGKTFLEKRY+EDLEL+DA+HTAILT
Sbjct: 135 LICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNI 218
LKE FEGQMT +NIE+GI +E GFRRL V+D+L+ I
Sbjct: 195 LKESFEGQMTEDNIEVGICNEAGFRRLTPTEVKDYLAAI 233
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 71/78 (91%)
Query: 257 VATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWK 316
V E IPT QLVQRVA++MQEYTQSGGVRPFGVSLLICGW+ RPYL+Q DPSGAYFAWK
Sbjct: 100 VYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWK 159
Query: 317 ATAMGRNYVNGKTFLEKR 334
ATAMG+NYVNGKTFLEKR
Sbjct: 160 ATAMGKNYVNGKTFLEKR 177
>sp|Q3T0Y5|PSA2_BOVIN Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3
Length = 234
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/219 (78%), Positives = 197/219 (89%), Gaps = 1/219 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV GAPSVGIKA+NG+VLATEKKQK+IL+ E +HKVEPIT +IG+
Sbjct: 15 PSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGL 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPDYR+LV +ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LICGW+ RPYL+Q DPSGAYFAWKATAMG+NYVNGKTFLEKRY+EDLEL+DA+HTAILT
Sbjct: 135 LICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNI 218
LKE FEGQMT +NIE+GI +E GFRRL V+D+L+ I
Sbjct: 195 LKESFEGQMTEDNIEVGICNEAGFRRLTPTEVKDYLAAI 233
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 71/78 (91%)
Query: 257 VATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWK 316
V E IPT QLVQRVA++MQEYTQSGGVRPFGVSLLICGW+ RPYL+Q DPSGAYFAWK
Sbjct: 100 VYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWK 159
Query: 317 ATAMGRNYVNGKTFLEKR 334
ATAMG+NYVNGKTFLEKR
Sbjct: 160 ATAMGKNYVNGKTFLEKR 177
>sp|O73672|PSA2_CARAU Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2
SV=3
Length = 234
Score = 354 bits (909), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 176/219 (80%), Positives = 199/219 (90%), Gaps = 1/219 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV AGAPSVGIKASNG+VLATEKKQK+IL+ E +HK+EPIT +IGM
Sbjct: 15 PSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGM 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPDYR+LV++ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LI GWD RPYL+Q DPSGAYFAWKATAMG++YVNGKTFLEKRY+EDLEL+DA+HTAILT
Sbjct: 135 LIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLELEDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNI 218
LKE FEGQMT ENIE+GI +E GFRRL A V+D+L+ I
Sbjct: 195 LKESFEGQMTEENIEVGICNEAGFRRLSPAEVKDYLAAI 233
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/78 (83%), Positives = 70/78 (89%)
Query: 257 VATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWK 316
V E IPT QLVQRVA++MQEYTQSGGVRPFGVSLLI GWD RPYL+Q DPSGAYFAWK
Sbjct: 100 VYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWK 159
Query: 317 ATAMGRNYVNGKTFLEKR 334
ATAMG++YVNGKTFLEKR
Sbjct: 160 ATAMGKSYVNGKTFLEKR 177
>sp|P24495|PSA2_XENLA Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2
SV=2
Length = 234
Score = 352 bits (902), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 175/219 (79%), Positives = 198/219 (90%), Gaps = 1/219 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV AGAPSVGIKA+NG+VLATEKKQK+IL+ E HKVEPIT +IGM
Sbjct: 15 PSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGM 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPDYR+LV++ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LI GWD RPYL+Q DPSGAYFAWKATAMG+NYVNGKTFLEKRY+EDLEL+DA+HTAILT
Sbjct: 135 LIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNI 218
LKE FEGQMT +NIE+GI +E GF+RL A V+D+L+ I
Sbjct: 195 LKESFEGQMTEDNIEVGICNEAGFKRLTPAEVKDYLAAI 233
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 70/78 (89%)
Query: 257 VATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWK 316
V E IPT QLVQRVA++MQEYTQSGGVRPFGVSLLI GWD RPYL+Q DPSGAYFAWK
Sbjct: 100 VYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDPSGAYFAWK 159
Query: 317 ATAMGRNYVNGKTFLEKR 334
ATAMG+NYVNGKTFLEKR
Sbjct: 160 ATAMGKNYVNGKTFLEKR 177
>sp|Q10KF0|PSA2_ORYSJ Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica
GN=PAB1 PE=2 SV=1
Length = 235
Score = 291 bits (746), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 139/220 (63%), Positives = 177/220 (80%), Gaps = 2/220 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIE+AL AV +G S+GIKA+NG+V+ATEKK +IL E + K++ +T IG+
Sbjct: 15 PSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGV 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPD+R+LV+K+RK AQQY +Y+E IP QLV+ AA+MQE+TQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LI G+D+ P LYQ DPSG+YF+WKA+AMG+N N KTFLEKRY+ED+ELDDA+HTAILT
Sbjct: 135 LIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIGIA-DENGFRRLDVATVRDHLSNI 218
LKEG+EGQ++A NIEIGI + F+ L A ++D L +
Sbjct: 195 LKEGYEGQISANNIEIGIIRSDREFKVLSPAEIKDFLEEV 234
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 62/75 (82%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E IP QLV+ AA+MQE+TQSGGVRPFGVSLLI G+D+ P LYQ DPSG+YF+WKA+A
Sbjct: 103 ETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASA 162
Query: 320 MGRNYVNGKTFLEKR 334
MG+N N KTFLEKR
Sbjct: 163 MGKNVSNAKTFLEKR 177
>sp|A2YVR7|PSA2_ORYSI Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica
GN=PAB1 PE=2 SV=2
Length = 235
Score = 291 bits (746), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 139/220 (63%), Positives = 177/220 (80%), Gaps = 2/220 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIE+AL AV +G S+GIKA+NG+V+ATEKK +IL E + K++ +T IG+
Sbjct: 15 PSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGV 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPD+R+LV+K+RK AQQY +Y+E IP QLV+ AA+MQE+TQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LI G+D+ P LYQ DPSG+YF+WKA+AMG+N N KTFLEKRY+ED+ELDDA+HTAILT
Sbjct: 135 LIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIGIA-DENGFRRLDVATVRDHLSNI 218
LKEG+EGQ++A NIEIGI + F+ L A ++D L +
Sbjct: 195 LKEGYEGQISANNIEIGIIRSDREFKVLSPAEIKDFLEEV 234
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 62/75 (82%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E IP QLV+ AA+MQE+TQSGGVRPFGVSLLI G+D+ P LYQ DPSG+YF+WKA+A
Sbjct: 103 ETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASA 162
Query: 320 MGRNYVNGKTFLEKR 334
MG+N N KTFLEKR
Sbjct: 163 MGKNVSNAKTFLEKR 177
>sp|O23708|PSA2A_ARATH Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1
PE=1 SV=1
Length = 235
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 180/220 (81%), Gaps = 2/220 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFEDC-IHKVEPITDYIGM 59
PSGKLVQIE+AL AV +G S+GIKASNG+V+ATEKK +IL ++ + K++ +T IG+
Sbjct: 15 PSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGV 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPD+R+LV+K+RK A+QY +Y+E IP QLV+ A +MQE+TQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G+D+K P LYQ DPSG+YF+WKA+AMG+N N KTFLEKRY+ED+ELDDA+HTAILT
Sbjct: 135 LVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIG-IADENGFRRLDVATVRDHLSNI 218
LKEGFEG+++++NIEIG I + FR L A + D+L+ +
Sbjct: 195 LKEGFEGEISSKNIEIGKIGADKVFRVLTPAEIDDYLAEV 234
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 62/75 (82%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E IP QLV+ A +MQE+TQSGGVRPFGVSLL+ G+D+K P LYQ DPSG+YF+WKA+A
Sbjct: 103 EPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASA 162
Query: 320 MGRNYVNGKTFLEKR 334
MG+N N KTFLEKR
Sbjct: 163 MGKNVSNAKTFLEKR 177
>sp|Q8L4A7|PSA2B_ARATH Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 235
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 179/220 (81%), Gaps = 2/220 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFEDC-IHKVEPITDYIGM 59
PSGKLVQIE+AL AV +G S+GIKASNG+V+ATEKK +IL ++ + K++ +T IG
Sbjct: 15 PSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGT 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
VYSGMGPD+R+LV+K+RK A+QY +Y+E IP QLV+ A +MQE+TQSGGVRPFGVSL
Sbjct: 75 VYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSL 134
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G+D+K P LYQ DPSG+YF+WKA+AMG+N N KTFLEKRY+ED+ELDDA+HTAILT
Sbjct: 135 LVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILT 194
Query: 180 LKEGFEGQMTAENIEIG-IADENGFRRLDVATVRDHLSNI 218
LKEGFEG+++++NIEIG I + FR L A + D+L+ +
Sbjct: 195 LKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEIDDYLAEV 234
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 62/75 (82%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E IP QLV+ A +MQE+TQSGGVRPFGVSLL+ G+D+K P LYQ DPSG+YF+WKA+A
Sbjct: 103 EPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASA 162
Query: 320 MGRNYVNGKTFLEKR 334
MG+N N KTFLEKR
Sbjct: 163 MGKNVSNAKTFLEKR 177
>sp|Q27488|PSA2_CAEEL Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2
PE=1 SV=1
Length = 231
Score = 282 bits (722), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 170/220 (77%), Gaps = 4/220 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFEDCIHKVEPITDYIGMV 60
PSGKL+QIEYAL AV+ G PSVG++A +G+VLATE ++L +D KVE I+ +IG V
Sbjct: 14 PSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENV-GSVLTDDQ-PKVEQISKHIGCV 71
Query: 61 YSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLL 120
YSGMGPD+R+LVKKARKIA +Y+++Y E +PT QLV +AA+MQEYTQSGGVRPFG SLL
Sbjct: 72 YSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLL 131
Query: 121 ICGWDNK--RPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAIL 178
I GWD RP L+QCDPSGAYFAWKATA+G+N VN KTFLEKR+SE LELDD +HTA+L
Sbjct: 132 IAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTALL 191
Query: 179 TLKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNI 218
TL+E F+ M N+E+ + + GF RL V DHL +
Sbjct: 192 TLRESFDVGMNENNVEVAVCNSTGFHRLTKQQVHDHLGTL 231
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 71/93 (76%), Gaps = 6/93 (6%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNK--RPYLYQCDPSGAYFAWKA 317
E +PT QLV +AA+MQEYTQSGGVRPFG SLLI GWD RP L+QCDPSGAYFAWKA
Sbjct: 99 EEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKA 158
Query: 318 TAMGRNYVNGKTFLEKR--EKLRVPNFCGYHIA 348
TA+G+N VN KTFLEKR E L + + G H A
Sbjct: 159 TALGKNDVNAKTFLEKRFSEALELDD--GIHTA 189
>sp|Q54DM7|PSA2_DICDI Proteasome subunit alpha type-2 OS=Dictyostelium discoideum
GN=psmA2 PE=3 SV=1
Length = 232
Score = 271 bits (694), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 173/219 (78%), Gaps = 1/219 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFEDCIHKVEPITDYIGMV 60
PSGKLVQIE+AL A +G ++GIKA NG+VL TEKK +++ + K+ IT+ IG+V
Sbjct: 14 PSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHSLVDVTSVQKISMITENIGLV 73
Query: 61 YSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLL 120
Y+GMGPD R+L+KKARK +++Y Y+E IP QLV+ +A+IMQE+TQSGGVRPFGVSLL
Sbjct: 74 YAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLL 133
Query: 121 ICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILTL 180
+ G+D K P+LYQ DPSG+YFAWKATA+G+N V+ KTFLEKRYS+DLE++DA+ TA++T+
Sbjct: 134 VAGFDEKGPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEIEDAIQTALITI 193
Query: 181 KEGFEGQMTAENIEIGIADENG-FRRLDVATVRDHLSNI 218
KEGFE Q+T N+E+ I +N F+ L A ++D+L N+
Sbjct: 194 KEGFETQLTEFNMELAIIGKNQEFKILTPAQIKDYLLNL 232
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 65/75 (86%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E IP QLV+ +A+IMQE+TQSGGVRPFGVSLL+ G+D K P+LYQ DPSG+YFAWKATA
Sbjct: 101 EKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKGPHLYQVDPSGSYFAWKATA 160
Query: 320 MGRNYVNGKTFLEKR 334
+G+N V+ KTFLEKR
Sbjct: 161 IGKNMVSSKTFLEKR 175
>sp|O94579|PSA2_SCHPO Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pre8 PE=3 SV=1
Length = 245
Score = 265 bits (676), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 138/232 (59%), Positives = 170/232 (73%), Gaps = 14/232 (6%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTIL-FEDCIHKVEPITDYIGM 59
P+GKLVQIEYAL AV AG SVGIKA++G+VLATEKK + L + KV IT IGM
Sbjct: 14 PNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGM 73
Query: 60 VYSGMGPDYRLLVKKARKIAQQ-YKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVS 118
VYSGMGPD+R+LV K+RK+AQ YK +Y E PT+ LVQ +A++MQE TQSGGVRPFGVS
Sbjct: 74 VYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVS 133
Query: 119 LLICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAIL 178
LL+ G D K P LYQ DPSG YFAWKATA+G++ KTFLEKRY+++LELDDAVHTAIL
Sbjct: 134 LLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAIL 193
Query: 179 TLKEGFEGQMTAENIEIGIAD----ENG--------FRRLDVATVRDHLSNI 218
LKE FEG++T +NIEI + ++G F RL + +RD+L +
Sbjct: 194 ALKETFEGELTEDNIEIAVVSTKPTDSGIVGVPGGHFCRLSQSEIRDYLDQV 245
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 58/72 (80%)
Query: 263 PTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATAMGR 322
PT+ LVQ +A++MQE TQSGGVRPFGVSLL+ G D K P LYQ DPSG YFAWKATA+G+
Sbjct: 106 PTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGK 165
Query: 323 NYVNGKTFLEKR 334
+ KTFLEKR
Sbjct: 166 SSTAAKTFLEKR 177
>sp|Q8X077|PSA2_NEUCR Probable proteasome subunit alpha type-2 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=B14D6.510 PE=3 SV=1
Length = 249
Score = 260 bits (665), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 136/236 (57%), Positives = 164/236 (69%), Gaps = 18/236 (7%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
PSGKLVQIEYAL AV G ++GIKA+NGIVLATEKK + L + + K+ IT IGM
Sbjct: 14 PSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGM 73
Query: 60 VYSGMGPDYRLLVKKARKIAQQ-YKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVS 118
VYSGMGPDYR+LV +ARK++ YK +Y E PT+ LVQ VA +MQE TQSGGVRP+GVS
Sbjct: 74 VYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSGGVRPYGVS 133
Query: 119 LLICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAIL 178
LLI GWD P LYQ DPSG+YF WKATA+G+N KTFLEKRY+E LEL+DAVH A+L
Sbjct: 134 LLIAGWDEGGPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDAVHIALL 193
Query: 179 TLKEGFEGQMTAENIEIGI----------------ADENGFRRLDVATVRDHLSNI 218
TLKE EG+M + IEIGI A FR+L + D+L+N+
Sbjct: 194 TLKETIEGEMNGDTIEIGIVGPPADHLLGVEGVEGAKGPRFRKLSPQEIEDYLTNL 249
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 249 ENGFRRLDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDP 308
G++R + E PT+ LVQ VA +MQE TQSGGVRP+GVSLLI GWD P LYQ DP
Sbjct: 94 HTGYKR--IYNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWDEGGPMLYQVDP 151
Query: 309 SGAYFAWKATAMGRNYVNGKTFLEKR 334
SG+YF WKATA+G+N KTFLEKR
Sbjct: 152 SGSYFPWKATAIGKNATTAKTFLEKR 177
>sp|Q9U793|PSA2_TRYBB Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 231
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 161/219 (73%), Gaps = 1/219 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED-CIHKVEPITDYIGM 59
PSG+LVQIEYA A G ++G+KA++G+V+A EKK + L + +HKV + D++G
Sbjct: 13 PSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGC 72
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
YSG+GPD R+LV AR+ Q+Y+L Y E +P QLV++++ + QE+TQSGGVRPFG SL
Sbjct: 73 TYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSL 132
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G D++ +LYQ DPSG ++ WKAT++G+ + +TFLEKRY+ ++E++DAVHTA+LT
Sbjct: 133 LVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTALLT 192
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNI 218
LKEGF+G+MTAEN ++G E F L V ++D+L I
Sbjct: 193 LKEGFDGRMTAENTQVGRVVEGRFELLTVEQLKDYLDQI 231
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E +P QLV++++ + QE+TQSGGVRPFG SLL+ G D++ +LYQ DPSG ++ WKAT+
Sbjct: 101 EPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATS 160
Query: 320 MGRNYVNGKTFLEKR 334
+G+ + +TFLEKR
Sbjct: 161 IGKGSPDARTFLEKR 175
>sp|P23639|PSA2_YEAST Proteasome subunit alpha type-2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE8 PE=1 SV=1
Length = 250
Score = 234 bits (598), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 151/205 (73%), Gaps = 4/205 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTIL-FEDCIHKVEPITDYIGM 59
PSGKL QI+YAL AV+ G S+GIKA+NG+V+ATEKK + L + + KV +T IG
Sbjct: 14 PSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGA 73
Query: 60 VYSGMGPDYRLLVKKARKIAQ-QYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVS 118
VYSGMGPDYR+LV K+RK+A YK +Y E PT+ LV VA IMQE TQSGGVRPFGVS
Sbjct: 74 VYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVS 133
Query: 119 LLICGWDNKRPY-LYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
LLI G D + LYQ DPSG+YF WKATA+G+ V KTFLEKR++++LEL+DA+H A+
Sbjct: 134 LLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDAIHIAL 193
Query: 178 LTLKEGFEGQMTAENIEIG-IADEN 201
LTLKE EG+ + IE+ I DEN
Sbjct: 194 LTLKESVEGEFNGDTIELAIIGDEN 218
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 263 PTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPY-LYQCDPSGAYFAWKATAMG 321
PT+ LV VA IMQE TQSGGVRPFGVSLLI G D + LYQ DPSG+YF WKATA+G
Sbjct: 106 PTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIG 165
Query: 322 RNYVNGKTFLEKR 334
+ V KTFLEKR
Sbjct: 166 KGSVAAKTFLEKR 178
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 132/219 (60%), Gaps = 5/219 (2%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K G+VLA EK+ + L E D K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R+LV +AR AQ Y+L Y E P +V+++ + Q +TQ GGVRPFG +L
Sbjct: 79 ASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G N RP LY+ DPSGAYFAWKA A+G E++Y +D+ L+DA+ A++
Sbjct: 139 LMAGI-NDRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMA 197
Query: 180 LKEGFEGQMTAENIEIGI--ADENGFRRLDVATVRDHLS 216
L + E +A+NIE+ + + FR+L + +LS
Sbjct: 198 LAKTMENP-SADNIEVAVITVKDKKFRKLTRDEIEKYLS 235
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E P +V+++ + Q +TQ GGVRPFG +LL+ G N RP LY+ DPSGAYFAWKA A
Sbjct: 107 EPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGI-NDRPELYETDPSGAYFAWKAVA 165
Query: 320 MGRNYVNGKTFLEKR 334
+G E++
Sbjct: 166 IGSGRNTAMAIFEEK 180
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ GGVRPFGV+L
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+I G D P LY +PSG Y ++A A+G+ Y FLEK Y EDL ++D + A+
Sbjct: 139 VIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKA 198
Query: 180 LKEGFEG--QMTAENIEIGIA 198
L + ++T +EIG A
Sbjct: 199 LSATLKPNEKLTPNTVEIGYA 219
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%)
Query: 233 FEGQMTAENIEIGIADENGFRRLDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLL 292
F G + + I A + + E + L + VA + Q YTQ GGVRPFGV+L+
Sbjct: 80 FAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALV 139
Query: 293 ICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKREK 336
I G D P LY +PSG Y ++A A+G+ Y FLEK K
Sbjct: 140 IAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ GGVRPFGV+L
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+I G D P LY +PSG Y ++A A+G+ Y FLEK Y EDL ++D + A+
Sbjct: 139 VIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKA 198
Query: 180 LKEGFEG--QMTAENIEIGIA 198
L + ++T +EIG A
Sbjct: 199 LSATLKPNEKLTPNTVEIGYA 219
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%)
Query: 233 FEGQMTAENIEIGIADENGFRRLDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLL 292
F G + + I A + + E + L + VA + Q YTQ GGVRPFGV+L+
Sbjct: 80 FAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALV 139
Query: 293 ICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKREK 336
I G D P LY +PSG Y ++A A+G+ Y FLEK K
Sbjct: 140 IAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ GGVRPFGV+L
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+I G D P LY +PSG Y ++A A+G+ Y FLEK Y EDL ++D + A+
Sbjct: 139 VIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKA 198
Query: 180 LKEGFEG--QMTAENIEIGIA 198
L + ++T +EIG A
Sbjct: 199 LSATLKPNEKLTPNTVEIGYA 219
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%)
Query: 233 FEGQMTAENIEIGIADENGFRRLDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLL 292
F G + + I A + + E + L + VA + Q YTQ GGVRPFGV+L+
Sbjct: 80 FAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALV 139
Query: 293 ICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKREK 336
I G D P LY +PSG Y ++A A+G+ Y FLEK K
Sbjct: 140 IAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ GGVRPFGV+L
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+I G D P LY +PSG Y ++A A+G+ Y FLEK Y EDL ++D + A+
Sbjct: 139 VIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKA 198
Query: 180 LKEGFEG--QMTAENIEIGIA 198
L + ++T +EIG A
Sbjct: 199 LSATLKPNEKLTPNTVEIGYA 219
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%)
Query: 233 FEGQMTAENIEIGIADENGFRRLDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLL 292
F G + + I A + + E + L + VA + Q YTQ GGVRPFGV+L+
Sbjct: 80 FAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALV 139
Query: 293 ICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKREK 336
I G D P LY +PSG Y ++A A+G+ Y FLEK K
Sbjct: 140 IAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ GGVRPFGV+L
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+I G D P LY +PSG Y ++A A+G+ Y FLEK Y EDL ++D + A+
Sbjct: 139 VIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKA 198
Query: 180 LKEGFEG--QMTAENIEIGIA 198
L + ++T +EIG A
Sbjct: 199 LSATLKPNEKLTPNTVEIGYA 219
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%)
Query: 233 FEGQMTAENIEIGIADENGFRRLDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLL 292
F G + + I A + + E + L + VA + Q YTQ GGVRPFGV+L+
Sbjct: 80 FAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALV 139
Query: 293 ICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKREK 336
I G D P LY +PSG Y ++A A+G+ Y FLEK K
Sbjct: 140 IAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ GGVRPFGV+L
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+I G D P LY +PSG Y ++A A+G+ Y FLEK Y EDL ++D + A+
Sbjct: 139 VIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKA 198
Query: 180 LKEGFEG--QMTAENIEIGIA 198
L + ++T +EIG A
Sbjct: 199 LSATLKPNEKLTPNTVEIGYA 219
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%)
Query: 233 FEGQMTAENIEIGIADENGFRRLDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLL 292
F G + + I A + + E + L + VA + Q YTQ GGVRPFGV+L+
Sbjct: 80 FAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALV 139
Query: 293 ICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKREK 336
I G D P LY +PSG Y ++A A+G+ Y FLEK K
Sbjct: 140 IAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 134/219 (61%), Gaps = 5/219 (2%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K + G+VLA EK+ + L E + K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R+LV +AR AQ ++L Y E P +V+++ + Q +TQ GGVRPFG +L
Sbjct: 79 ASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G N++P LY+ DPSGAYFAWKA A+G E++Y +D+ L++A+ AI
Sbjct: 139 LMAGV-NEKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFA 197
Query: 180 LKEGFEGQMTAENIEIGI--ADENGFRRLDVATVRDHLS 216
L + E + +AENIE+ I + FR+L + +L+
Sbjct: 198 LAKTME-KPSAENIEVAIITVKDKKFRKLSREEIEKYLN 235
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E P +V+++ + Q +TQ GGVRPFG +LL+ G N++P LY+ DPSGAYFAWKA A
Sbjct: 107 EPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGV-NEKPELYETDPSGAYFAWKAVA 165
Query: 320 MGRNYVNGKTFLEKREK 336
+G E++ K
Sbjct: 166 IGSGRNTAMAIFEEKYK 182
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 126/219 (57%), Gaps = 1/219 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G ++GIK G+VL +K+ + L E + I KV I +IG
Sbjct: 19 PDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
+G+ D R+LV++AR AQ Y+ Y E I LV+ + + Q YTQ GGVRPFG +L
Sbjct: 79 ATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LI G D K L++ DPSGA KATA+G E+ Y ED+ L +A+ A+
Sbjct: 139 LIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRA 198
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNI 218
L E + TA+N+EI + D+ GFR+L+ + + +
Sbjct: 199 LYEASREETTADNLEIAVVDKQGFRKLERKKIEEMFERV 237
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E I LV+ + + Q YTQ GGVRPFG +LLI G D K L++ DPSGA KATA
Sbjct: 107 EPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATA 166
Query: 320 MG 321
+G
Sbjct: 167 IG 168
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 5/209 (2%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K +G+VLA EK+ + L E + K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R+LV +AR AQ ++L Y E P +V+++ + Q +TQ GGVRPFG +L
Sbjct: 79 ASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G N +P LY+ DPSGAYFAWKA A+G E +Y +D+ LD+A+ AI
Sbjct: 139 LMAGV-NDKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFA 197
Query: 180 LKEGFEGQMTAENIEIGI--ADENGFRRL 206
L + E + +AENIE+ + + FR+L
Sbjct: 198 LAKTME-KPSAENIEVAVITVKDKKFRKL 225
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E P +V+++ + Q +TQ GGVRPFG +LL+ G N +P LY+ DPSGAYFAWKA A
Sbjct: 107 EPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGV-NDKPELYETDPSGAYFAWKAVA 165
Query: 320 MG 321
+G
Sbjct: 166 IG 167
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 128/211 (60%), Gaps = 8/211 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ GA ++GIK G++L +K+ + L E D I K+ I ++I
Sbjct: 17 PDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICA 76
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R+L+ +AR AQ +L Y E I ++L +++ Q+YTQ GGVRPFGVSL
Sbjct: 77 ATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSL 136
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATA--MGRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
LI G D + P LY+ DPSGA +KATA MGRN V F EK Y +DL DDA+ +
Sbjct: 137 LIAGVD-EVPKLYETDPSGALLEYKATAIGMGRNAVT--EFFEKEYRDDLSFDDAMVLGL 193
Query: 178 LTLKEGFEGQMTAENIEIGI--ADENGFRRL 206
+ + E ++ ENIE+G D+ F+ +
Sbjct: 194 VAMGLSIESELVPENIEVGYVKVDDRTFKEV 224
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E I ++L +++ Q+YTQ GGVRPFGVSLLI G D + P LY+ DPSGA +KATA
Sbjct: 105 EPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVD-EVPKLYETDPSGALLEYKATA 163
Query: 320 --MGRNYVNGKTFLEK 333
MGRN V F EK
Sbjct: 164 IGMGRNAVT--EFFEK 177
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 133/219 (60%), Gaps = 5/219 (2%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K G+VLA EK+ + L E K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ GGVRPFG +L
Sbjct: 79 APSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G N++P LY+ DPSGAYF WKA A+G E+ YS+D++++ A+ AIL
Sbjct: 139 LMAGV-NEKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDIDMEGAIKLAILA 197
Query: 180 LKEGFEGQMTAENIEIG--IADENGFRRLDVATVRDHLS 216
L + E + + E+IE+ DE +++LD V +L+
Sbjct: 198 LAKTLE-EPSPESIEVAYITLDEKRWKKLDKEEVAKYLN 235
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E +P LV+++ + Q +TQ GGVRPFG +LL+ G N++P LY+ DPSGAYF WKA A
Sbjct: 107 EPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGV-NEKPELYETDPSGAYFEWKAVA 165
Query: 320 MG 321
+G
Sbjct: 166 IG 167
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 132/221 (59%), Gaps = 5/221 (2%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K +G+VLA EK+ + L E K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ GGVRPFG +L
Sbjct: 79 APSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G N++P L++ DPSGAYF WKA A+G E+ Y +D+ DDA+ AIL
Sbjct: 139 LMAGV-NEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILA 197
Query: 180 LKEGFEGQMTAENIEIG--IADENGFRRLDVATVRDHLSNI 218
L + E + TAE IE+ DE +++L + +L+ I
Sbjct: 198 LAKTLE-EPTAEGIEVAYITMDEKRWKKLPREELEKYLNEI 237
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E +P LV+++ + Q +TQ GGVRPFG +LL+ G N++P L++ DPSGAYF WKA A
Sbjct: 107 EPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGV-NEKPELFETDPSGAYFEWKAVA 165
Query: 320 MG 321
+G
Sbjct: 166 IG 167
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 3/221 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G S+G+K+ GIVL +K+ + L E I K+ I ++IG
Sbjct: 18 PDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGA 77
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R +++KAR AQ ++ Y E I + L +++ + Q YTQ GGVRPFG +L
Sbjct: 78 ATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTAL 137
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+I G + + L++ DPSGA +KATA+G EK+YS+D+ L+ A+ A+
Sbjct: 138 IIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDMNLNQAIELALDA 197
Query: 180 LKEGFEGQMTAENIEIGI--ADENGFRRLDVATVRDHLSNI 218
+ E EG+ T E++EI + A + +RRL +RDH+ +
Sbjct: 198 VYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHVEEL 238
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E I + L +++ + Q YTQ GGVRPFG +L+I G + + L++ DPSGA +KATA
Sbjct: 106 EPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATA 165
Query: 320 MG 321
+G
Sbjct: 166 IG 167
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 124/201 (61%), Gaps = 3/201 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ + +V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ GGVRPFGV+L
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+I G D P L+ +PSG Y ++A A+G+ Y FLEK Y EDL +++ + A+
Sbjct: 139 VIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKA 198
Query: 180 LKEGFEG--QMTAENIEIGIA 198
L + ++T +EIG A
Sbjct: 199 LSATLKPNEKLTPNTVEIGYA 219
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 233 FEGQMTAENIEIGIADENGFRRLDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLL 292
F G + + I A + + E + L + VA + Q YTQ GGVRPFGV+L+
Sbjct: 80 FAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALV 139
Query: 293 ICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEK--REKLRV 339
I G D P L+ +PSG Y ++A A+G+ Y FLEK +E L V
Sbjct: 140 IAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNV 188
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 132/221 (59%), Gaps = 5/221 (2%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K +G+VLA EK+ + L E K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ GGVRPFG +L
Sbjct: 79 APSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G N++P L++ DPSGAYF WKA A+G E+ Y +D+ DDA+ AIL
Sbjct: 139 LMAGV-NEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILA 197
Query: 180 LKEGFEGQMTAENIEIG--IADENGFRRLDVATVRDHLSNI 218
L + E + TAE IE+ DE +++L + +++ I
Sbjct: 198 LAKTLE-EPTAEGIEVAYITMDEKRWKKLPREELEKYINEI 237
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E +P LV+++ + Q +TQ GGVRPFG +LL+ G N++P L++ DPSGAYF WKA A
Sbjct: 107 EPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGV-NEKPELFETDPSGAYFEWKAVA 165
Query: 320 MG 321
+G
Sbjct: 166 IG 167
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 131/209 (62%), Gaps = 5/209 (2%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q++YA AV+ GA +VG+K +G+VLA EK+ + L E + K+ I D+I
Sbjct: 19 PDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ GGVRPFG +L
Sbjct: 79 ASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G N++P L++ DPSGAYF WKA A+G E++Y +++ L++A+ A+L
Sbjct: 139 LMAGV-NEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDEMTLEEAIKLAVLA 197
Query: 180 LKEGFEGQMTAENIEIGI--ADENGFRRL 206
L + E + + E+IE+ + E F+++
Sbjct: 198 LSKIME-EPSPESIEVAVISVKEKKFKKI 225
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E +P LV+++ + Q +TQ GGVRPFG +LL+ G N++P L++ DPSGAYF WKA A
Sbjct: 107 EPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGV-NEKPELFETDPSGAYFEWKAVA 165
Query: 320 MGRNYVNGKTFLEKR 334
+G E++
Sbjct: 166 IGSGRNTAMAIFEEK 180
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 129/218 (59%), Gaps = 5/218 (2%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K G+VLA EK+ + L E K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ GGVRPFG +L
Sbjct: 79 APSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
L+ G N +P LY+ DPSGAYF W+A A+G E YS+DL+++ A+ AIL
Sbjct: 139 LMAGV-NDKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILA 197
Query: 180 LKEGFEGQMTAENIEIG--IADENGFRRLDVATVRDHL 215
L + E + + E+IE+ + ++++D V +L
Sbjct: 198 LAKTLE-EPSPESIEVAYITMKDKRWKKMDKEEVAKYL 234
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E +P LV+++ + Q +TQ GGVRPFG +LL+ G N +P LY+ DPSGAYF W+A A
Sbjct: 107 EPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGV-NDKPELYETDPSGAYFEWRAVA 165
Query: 320 MG 321
+G
Sbjct: 166 IG 167
>sp|P25156|PSA_THEAC Proteasome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=psmA PE=1 SV=2
Length = 233
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 128/217 (58%), Gaps = 2/217 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G+ ++G+K +NG++L ++KK ++ L E + I K++ I DY+
Sbjct: 17 PDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAA 76
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
V SG+ D R+LV AR AQQ K+ Y + + LV+RVA MQ+YTQ GGVRP+GVSL
Sbjct: 77 VTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSL 136
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+ G D P L+ CDP+G +KATA+G +FLE+ Y E+L +AV I
Sbjct: 137 IFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKA 196
Query: 180 LKEGFEGQMTAENIEIG-IADENGFRRLDVATVRDHL 215
LK E + EI I N +R D V+ L
Sbjct: 197 LKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 262 IPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATAMG 321
+ + LV+RVA MQ+YTQ GGVRP+GVSL+ G D P L+ CDP+G +KATA+G
Sbjct: 107 VNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIG 166
Query: 322 RNYVNGKTFLEKREKLRVP 340
+FLE+ K +P
Sbjct: 167 SGKDAVVSFLEREYKENLP 185
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G+ ++G+K SNG++L ++KK ++ L E + + K++ I DY+
Sbjct: 17 PDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAA 76
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
V SG+ D R+L+ AR AQQ K+ Y + + LV+RVA MQ+YTQ GGVRP+GVSL
Sbjct: 77 VTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSL 136
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+ G D P L+ CDP+G +KATA+G +FLEK Y E L +AV I
Sbjct: 137 IFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKA 196
Query: 180 LKEGFE 185
LK E
Sbjct: 197 LKASLE 202
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 262 IPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATAMG 321
+ + LV+RVA MQ+YTQ GGVRP+GVSL+ G D P L+ CDP+G +KATA+G
Sbjct: 107 VNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIG 166
Query: 322 RNYVNGKTFLEKREK 336
+FLEK K
Sbjct: 167 SGKDAVVSFLEKEYK 181
>sp|P57697|PSA_HALSA Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=psmA PE=3 SV=1
Length = 253
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 124/222 (55%), Gaps = 7/222 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G S+G++ G+VL +K+ ++ L E + K+ I D++G
Sbjct: 19 PDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
+G D R LV AR+ +Q ++ Y E I + L + V +Q+YTQ GG RPFGV+L
Sbjct: 79 ASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LI G + P L++ DPSG WKA A+G N + + FLE Y L +DD + A+
Sbjct: 139 LIAGVEGGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRA 198
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNIPQS 221
L EG E ++ + + +GI D D T R+ ++ QS
Sbjct: 199 LNEGREDALSGDGVGVGIVD------ADTGTYRELAADESQS 234
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E I + L + V +Q+YTQ GG RPFGV+LLI G + P L++ DPSG WKA A
Sbjct: 107 EPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEPRLFETDPSGTSNEWKAVA 166
Query: 320 MGRNYVNGKTFLE 332
+G N + + FLE
Sbjct: 167 IGSNRGDIQEFLE 179
>sp|B0R2T2|PSA_HALS3 Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=psmA PE=3 SV=1
Length = 253
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 124/222 (55%), Gaps = 7/222 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G S+G++ G+VL +K+ ++ L E + K+ I D++G
Sbjct: 19 PDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
+G D R LV AR+ +Q ++ Y E I + L + V +Q+YTQ GG RPFGV+L
Sbjct: 79 ASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LI G + P L++ DPSG WKA A+G N + + FLE Y L +DD + A+
Sbjct: 139 LIAGVEGGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRA 198
Query: 180 LKEGFEGQMTAENIEIGIADENGFRRLDVATVRDHLSNIPQS 221
L EG E ++ + + +GI D D T R+ ++ QS
Sbjct: 199 LNEGREDALSGDGVGVGIVD------ADTGTYRELAADESQS 234
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E I + L + V +Q+YTQ GG RPFGV+LLI G + P L++ DPSG WKA A
Sbjct: 107 EPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEPRLFETDPSGTSNEWKAVA 166
Query: 320 MGRNYVNGKTFLE 332
+G N + + FLE
Sbjct: 167 IGSNRGDIQEFLE 179
>sp|P23638|PSA3_YEAST Proteasome subunit alpha type-3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE9 PE=1 SV=1
Length = 258
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 123/215 (57%), Gaps = 15/215 (6%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED--CIHKVEPITDYIG 58
P G+L Q+EYAL ++ ++GI AS+GIVLA E+K + L E K+ + D I
Sbjct: 15 PEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIA 74
Query: 59 MVYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVS 118
+ +G+ D +L+ AR AQ Y Y E+IP + LV+R++ I Q YTQ GG+RPFGVS
Sbjct: 75 VAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVS 134
Query: 119 LLICGWDNKRPY-LYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
+ G+D++ Y LY +PSG Y WKA ++G N +T L+ Y +D+++DDA+ A+
Sbjct: 135 FIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELAL 194
Query: 178 LTLKEGFEGQMTAENIEIGIADENGFRRLDVATVR 212
TL + + + RL+ AT+R
Sbjct: 195 KTLSKTTDSSALT------------YDRLEFATIR 217
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 255 LDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPY-LYQCDPSGAYF 313
L E+IP + LV+R++ I Q YTQ GG+RPFGVS + G+D++ Y LY +PSG Y
Sbjct: 99 LKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYT 158
Query: 314 AWKATAMGRNYVNGKTFLE 332
WKA ++G N +T L+
Sbjct: 159 GWKAISVGANTSAAQTLLQ 177
>sp|A5UJS2|PSA_METS3 Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1
Length = 250
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G S+GIK S GIVLA +K+ + L E I K+ I ++IG
Sbjct: 18 PDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGA 77
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R LV++AR AQ K+ Y E I L +++ ++Q YTQ+GGVRPFG +L
Sbjct: 78 ATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSAL 137
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
+I G + L++ DPSGA +KATA+G E +Y +D+ L++A++ A+
Sbjct: 138 IIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDMNLNEAINLALTA 197
Query: 180 LKEGFEGQMTAENIEIGI 197
+ E E + TA N+EI +
Sbjct: 198 INEATEHETTANNVEIAV 215
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 259 TENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKAT 318
+E I L +++ ++Q YTQ+GGVRPFG +L+I G + L++ DPSGA +KAT
Sbjct: 105 SEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGICKLFETDPSGALIEYKAT 164
Query: 319 AMG 321
A+G
Sbjct: 165 AIG 167
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 133/223 (59%), Gaps = 7/223 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G +VGIKA++G+VL +K+ + L E + I K+ I D+IG
Sbjct: 16 PDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGA 75
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R LV +AR AQ ++ Y E I + + +++ Q YTQ GGVRP+G +L
Sbjct: 76 ATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTAL 135
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAM--GRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
LI G D+KRP L++ DPSGA +KATA+ GRN V E Y ED+ ++ A+ +
Sbjct: 136 LIAGVDDKRPRLFETDPSGALLEYKATAIGAGRNAV--VEVFEADYKEDMNIEAAILLGM 193
Query: 178 LTLKEGFEGQMTAENIEIGIAD--ENGFRRLDVATVRDHLSNI 218
L + EG+ A +E+G+ + FR+L+ V +++ I
Sbjct: 194 DALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQI 236
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E I + + +++ Q YTQ GGVRP+G +LLI G D+KRP L++ DPSGA +KATA
Sbjct: 104 ELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKRPRLFETDPSGALLEYKATA 163
Query: 320 M--GRNYV 325
+ GRN V
Sbjct: 164 IGAGRNAV 171
>sp|Q9SXU1|PSA7_CICAR Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2
SV=1
Length = 249
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 7/215 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED-CIHKVEPITDYIGM 59
P G L Q+EYAL AV G +VG++ ++ +VL EKK L + + K+ + D+I +
Sbjct: 13 PDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDTRSVRKIVNLDDHIAL 72
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
+G+ D R+L+ +AR Q ++L ++ + + + + +A + Q+YTQSGGVRPFG+S
Sbjct: 73 ACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLST 132
Query: 120 LICGWD--NKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
LI G+D P LYQ DPSG + AWKA A GRN + + FLEK + E + V AI
Sbjct: 133 LIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNFKE-TSGQETVKLAI 191
Query: 178 LTLKEGFEGQMTAENIEIGI-ADENGFRRLDVATV 211
L E E +NIE+ + ENG R+L+ A +
Sbjct: 192 RALLEVVES--GGKNIEVAVMTKENGLRQLEEAEI 224
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 262 IPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWD--NKRPYLYQCDPSGAYFAWKATA 319
+ + + + +A + Q+YTQSGGVRPFG+S LI G+D P LYQ DPSG + AWKA A
Sbjct: 103 VTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANA 162
Query: 320 MGRNYVNGKTFLEKREK 336
GRN + + FLEK K
Sbjct: 163 TGRNSNSIREFLEKNFK 179
>sp|Q18K08|PSA_HALWD Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM
16790) GN=psmA PE=3 SV=1
Length = 250
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 121/196 (61%), Gaps = 1/196 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G SVGI+ +GIVLA +K+ ++ L E + K+ D++G+
Sbjct: 19 PDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGI 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
+G D R L+ AR+ AQ +L Y E + + L + V +Q+YTQ GG RPFGV+L
Sbjct: 79 ASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVAL 138
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAILT 179
LI G ++ P LY+ DPSG + WKA ++G + + + LE+ Y+E+L LD+ V A+ T
Sbjct: 139 LIGGIEDGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRT 198
Query: 180 LKEGFEGQMTAENIEI 195
+ + ++TA +++
Sbjct: 199 IAISNDDELTAAGVDV 214
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E + + L + V +Q+YTQ GG RPFGV+LLI G ++ P LY+ DPSG + WKA +
Sbjct: 107 EPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIEDGSPRLYETDPSGTPYEWKAVS 166
Query: 320 MGRNYVNGKTFLEK 333
+G + + + LE+
Sbjct: 167 IGADRSDLQEHLEE 180
>sp|Q0J006|PSA7B_ORYSJ Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica
GN=PAD1 PE=2 SV=1
Length = 249
Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 129/219 (58%), Gaps = 7/219 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED-CIHKVEPITDYIGM 59
P G L Q+EYAL AV G +VG++ S+ +VL EKK L + + K+ + +I +
Sbjct: 13 PDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIAL 72
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
+G+ D R+L+ +AR Q ++L ++ + + + + +A + Q+YTQSGGVRPFG+S
Sbjct: 73 ACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLST 132
Query: 120 LICGWD--NKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
LI G+D +P LYQ DPSG + AWKA A GRN + + FLEK Y E + + AI
Sbjct: 133 LIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGKETIKLAI 191
Query: 178 LTLKEGFEGQMTAENIEIGI-ADENGFRRLDVATVRDHL 215
L E E +NIEI + ++G R+L+ A + +++
Sbjct: 192 RALLEVVES--GGKNIEIAVMTQKDGLRQLEEAEIDEYV 228
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 257 VATENIPTQQLVQR-VAAIMQEYTQSGGVRPFGVSLLICGWD--NKRPYLYQCDPSGAYF 313
+ E+ T + + R +A + Q+YTQSGGVRPFG+S LI G+D +P LYQ DPSG +
Sbjct: 97 LTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFS 156
Query: 314 AWKATAMGRNYVNGKTFLEKREK 336
AWKA A GRN + + FLEK K
Sbjct: 157 AWKANATGRNSNSMREFLEKNYK 179
>sp|A2Z3I9|PSA7B_ORYSI Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica
GN=PAD1 PE=2 SV=1
Length = 249
Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 129/219 (58%), Gaps = 7/219 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED-CIHKVEPITDYIGM 59
P G L Q+EYAL AV G +VG++ S+ +VL EKK L + + K+ + +I +
Sbjct: 13 PDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIAL 72
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
+G+ D R+L+ +AR Q ++L ++ + + + + +A + Q+YTQSGGVRPFG+S
Sbjct: 73 ACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLST 132
Query: 120 LICGWD--NKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
LI G+D +P LYQ DPSG + AWKA A GRN + + FLEK Y E + + AI
Sbjct: 133 LIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE-TSGKETIKLAI 191
Query: 178 LTLKEGFEGQMTAENIEIGI-ADENGFRRLDVATVRDHL 215
L E E +NIEI + ++G R+L+ A + +++
Sbjct: 192 RALLEVVES--GGKNIEIAVMTQKDGLRQLEEAEIDEYV 228
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 257 VATENIPTQQLVQR-VAAIMQEYTQSGGVRPFGVSLLICGWD--NKRPYLYQCDPSGAYF 313
+ E+ T + + R +A + Q+YTQSGGVRPFG+S LI G+D +P LYQ DPSG +
Sbjct: 97 LTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFS 156
Query: 314 AWKATAMGRNYVNGKTFLEKREK 336
AWKA A GRN + + FLEK K
Sbjct: 157 AWKANATGRNSNSMREFLEKNYK 179
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 132/223 (59%), Gaps = 7/223 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G +VGIKA++G+VL +K+ + L E + I K+ I D+IG
Sbjct: 18 PDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGA 77
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
SG+ D R LV +AR AQ ++ Y E I + + +++ Q YTQ GGVRP+G +L
Sbjct: 78 ATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTAL 137
Query: 120 LICGWDNKRPYLYQCDPSGAYFAWKATAM--GRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
LI G D+ +P L++ DPSGA +KATA+ GRN V E Y ED+ +D A+ +
Sbjct: 138 LIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAV--VEVFEADYREDMNIDAAILLGM 195
Query: 178 LTLKEGFEGQMTAENIEIGIA--DENGFRRLDVATVRDHLSNI 218
L + EG+ A +E+G+ ++ FR+L V +++ I
Sbjct: 196 DALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQI 238
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 260 ENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWDNKRPYLYQCDPSGAYFAWKATA 319
E I + + +++ Q YTQ GGVRP+G +LLI G D+ +P L++ DPSGA +KATA
Sbjct: 106 ELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATA 165
Query: 320 M--GRNYV 325
+ GRN V
Sbjct: 166 IGAGRNAV 173
>sp|Q09682|PSA3_SCHPO Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC13C5.01c PE=3
SV=1
Length = 248
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE--DCIHKVEPITDYIG 58
P G+L Q+EYAL A+ ++GI A +GIVLA EKK + L E + K+ I D +
Sbjct: 14 PEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNML 73
Query: 59 MVYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVS 118
+G+ D +L+ AR++ QQY + E +P +QLV+RV + Q YTQ GG+RPFGVS
Sbjct: 74 CAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVS 133
Query: 119 LLICGWDNKRPY-LYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
L GWD+ R Y L+Q +PSG Y +W+A ++G N + ++ + + Y +D+ LD+A A+
Sbjct: 134 FLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAV 193
Query: 178 LTLKEGFEGQ-MTAENIEIG 196
L + + +T E IE
Sbjct: 194 KFLSKTLDSNSLTHEKIEFA 213
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Query: 237 MTAE-NIEIGIADENGFRRLDVATENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICG 295
+TA+ NI I A G + L E +P +QLV+RV + Q YTQ GG+RPFGVS L G
Sbjct: 79 LTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAG 138
Query: 296 WDNKRPY-LYQCDPSGAYFAWKATAMGRNYVNGKTFLEKREK 336
WD+ R Y L+Q +PSG Y +W+A ++G N + ++ + + K
Sbjct: 139 WDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYK 180
>sp|O24616|PSA7B_ARATH Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2
PE=1 SV=2
Length = 250
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 128/216 (59%), Gaps = 8/216 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED-CIHKVEPITDYIGM 59
P G L Q+EYAL AV G +VG++ ++ +VLA EKK L + K+ + ++I +
Sbjct: 13 PDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIAL 72
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
+G+ D R+L+ KAR Q ++L ++ + + + + +A + Q+YTQSGGVRPFG+S
Sbjct: 73 ACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLST 132
Query: 120 LICGWD--NKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
LI G+D ++ P LYQ DPSG + AWKA A GRN + + FLEK Y E + + AI
Sbjct: 133 LIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES-SGQETIKLAI 191
Query: 178 LTLKEGFEGQMTAENIEIGIA--DENGFRRLDVATV 211
L E E +NIE+ + +E G R+L+ A +
Sbjct: 192 RALLEVVES--GGKNIEVAVMTREETGLRQLEEAEI 225
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 262 IPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWD--NKRPYLYQCDPSGAYFAWKATA 319
+ + + + +A + Q+YTQSGGVRPFG+S LI G+D ++ P LYQ DPSG + AWKA A
Sbjct: 103 VTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANA 162
Query: 320 MGRNYVNGKTFLEKREK 336
GRN + + FLEK K
Sbjct: 163 TGRNSNSIREFLEKNYK 179
>sp|Q6YT00|PSA7A_ORYSJ Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica
GN=Os08g0548900 PE=2 SV=1
Length = 249
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 130/219 (59%), Gaps = 7/219 (3%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED-CIHKVEPITDYIGM 59
P G L Q+EYAL AV G +VG++ ++ +VL EKK L + + K+ + +I +
Sbjct: 13 PDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIAL 72
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSGGVRPFGVSL 119
+G+ D R+L+ +AR Q ++L ++ + + + + +A + Q+YTQSGGVRPFG+S
Sbjct: 73 ACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLST 132
Query: 120 LICGWD--NKRPYLYQCDPSGAYFAWKATAMGRNYVNGKTFLEKRYSEDLELDDAVHTAI 177
LI G+D ++P LYQ DPSG + AWKA A GRN + + FLEK Y +D + + AI
Sbjct: 133 LIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KDTSGKETIKLAI 191
Query: 178 LTLKEGFEGQMTAENIEIGI-ADENGFRRLDVATVRDHL 215
L E E +NIEI + ++G R L+ A + +++
Sbjct: 192 RALLEVVESG--GKNIEIAVMTHKDGLRELEEAEIDEYV 228
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 262 IPTQQLVQRVAAIMQEYTQSGGVRPFGVSLLICGWD--NKRPYLYQCDPSGAYFAWKATA 319
+ + + + +A + Q+YTQSGGVRPFG+S LI G+D ++P LYQ DPSG + AWKA A
Sbjct: 103 VTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANA 162
Query: 320 MGRNYVNGKTFLEKREK 336
GRN + + FLEK K
Sbjct: 163 TGRNSNSMREFLEKNYK 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,205,731
Number of Sequences: 539616
Number of extensions: 5609469
Number of successful extensions: 16195
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 15177
Number of HSP's gapped (non-prelim): 664
length of query: 352
length of database: 191,569,459
effective HSP length: 118
effective length of query: 234
effective length of database: 127,894,771
effective search space: 29927376414
effective search space used: 29927376414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)