BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2870
(487 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 93/150 (62%), Gaps = 13/150 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
K ECP+G + +DTFK IYA+FFP G +S YAHY+FN D +TG + FEDFV LSIL
Sbjct: 25 KNECPSGVVNEDTFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILL 83
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ EKLRW F LYDIN DG I+K+++ +IV ++Y++MG Y Y Q V+ F
Sbjct: 84 RGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFF 143
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
Q +D NK G + ++F++
Sbjct: 144 Q------------KMDKNKDGIVTLDEFLE 161
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%)
Query: 397 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456
YAHY+FN D +TG + FEDFV LSIL RG+ EKLRW F LYDIN DG I+K+++ +
Sbjct: 54 YAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 457 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
IV ++Y++MG Y Y Q V+ FQ
Sbjct: 114 IVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQ 144
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 93/150 (62%), Gaps = 13/150 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
K ECP+G + +DTFK IYA+FFP G +S YAHY+FN D +TG + FEDFV LSIL
Sbjct: 25 KNECPSGVVNEDTFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILL 83
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ EKLRW F LYDIN DG I+K+++ +IV ++Y++MG Y Y Q V+ F
Sbjct: 84 RGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFF 143
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
Q +D NK G + ++F++
Sbjct: 144 Q------------KMDKNKDGIVTLDEFLE 161
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%)
Query: 397 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456
YAHY+FN D +TG + FEDFV LSIL RG+ EKLRW F LYDIN DG I+K+++ +
Sbjct: 54 YAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 457 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
IV ++Y++MG Y Y Q V+ FQ
Sbjct: 114 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 144
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 93/151 (61%), Gaps = 13/151 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
K ECP+G + ++TFK IYA+FFP G +S YAHY+FN D +TG + FEDFV LSIL
Sbjct: 61 KNECPSGVVNEETFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILL 119
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ EKLRW F LYDIN DG I+K+++ +IV ++Y++MG Y Y Q V+ F
Sbjct: 120 RGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFF 179
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKG 421
Q +D NK G + ++F++
Sbjct: 180 Q------------KMDKNKDGIVTLDEFLES 198
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%)
Query: 397 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456
YAHY+FN D +TG + FEDFV LSIL RG+ EKLRW F LYDIN DG I+K+++ +
Sbjct: 90 YAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMD 149
Query: 457 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
IV ++Y++MG Y Y Q V+ FQ
Sbjct: 150 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 180
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 92/150 (61%), Gaps = 13/150 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
K E P+G + ++TFK IYA+FFP G +S YAHY+FN D +TG + FEDFV LSIL
Sbjct: 28 KNEXPSGVVNEETFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILL 86
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ EKLRW F LYDIN DG I+K+++ +IV ++Y++MG Y Y Q V+ F
Sbjct: 87 RGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFF 146
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
Q +D NK G + ++F++
Sbjct: 147 Q------------KMDKNKDGIVTLDEFLE 164
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%)
Query: 397 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456
YAHY+FN D +TG + FEDFV LSIL RG+ EKLRW F LYDIN DG I+K+++ +
Sbjct: 57 YAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMD 116
Query: 457 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
IV ++Y++MG Y Y Q V+ FQ
Sbjct: 117 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 147
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 94/150 (62%), Gaps = 13/150 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
K ECP+G + ++TFK IY++FFP G S+ YAH++FN D + G ++FEDF+KGLSIL
Sbjct: 74 KNECPSGVVNEETFKEIYSQFFPQGDST-TYAHFLFNAFDTDHNGAVSFEDFIKGLSILL 132
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ +EKL W F LYDIN DG I+K+++ +I+ ++Y++MG Y Q VE F
Sbjct: 133 RGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFF 192
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
Q +D NK G + ++F++
Sbjct: 193 Q------------KMDKNKDGVVTIDEFIE 210
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 63/97 (64%)
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
Q + YAH++FN D + G ++FEDF+KGLSIL RG+ +EKL W F LYDIN DG I+
Sbjct: 97 QGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYIT 156
Query: 451 KDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
K+++ +I+ ++Y++MG Y Q VE FQ
Sbjct: 157 KEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQ 193
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 13/150 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
K ECPTG + +DTFK IY++FFP G ++ YAH++FN D + G ++FEDFV GLSIL
Sbjct: 101 KNECPTGLVDEDTFKLIYSQFFPQGDATT-YAHFLFNAFDADGNGAIHFEDFVVGLSILL 159
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ EKL+W F LYDIN DG I+K+++ I+ S+Y++MG + Y + VE F
Sbjct: 160 RGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFF 219
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
Q +D N+ G + ++F++
Sbjct: 220 Q------------KMDRNQDGVVTIDEFLE 237
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%)
Query: 397 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456
YAH++FN D + G ++FEDFV GLSIL RG+ EKL+W F LYDIN DG I+K+++
Sbjct: 130 YAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLA 189
Query: 457 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
I+ S+Y++MG + Y + VE FQ
Sbjct: 190 IMKSIYDMMGRHTYPILREDAPLEHVERFFQ 220
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 13/149 (8%)
Query: 273 ECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG 332
+CP+G + + FK IY FFP G +S ++A +VF T D N G ++F +F+ LS+ RG
Sbjct: 37 DCPSGHLSMEEFKKIYGNFFPYGDAS-KFAEHVFRTFDANGDGTIDFREFIIALSVTSRG 95
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
E+KL+W F +YD++G+G ISK ++ IV ++Y+++ + D +R E
Sbjct: 96 KLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTE----- 150
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKG 421
+F +D N+ G L+ E+F++G
Sbjct: 151 -------KIFRQMDTNRDGKLSLEEFIRG 172
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 57/92 (61%)
Query: 396 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLY 455
++A +VF T D N G ++F +F+ LS+ RG E+KL+W F +YD++G+G ISK ++
Sbjct: 63 KFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEML 122
Query: 456 NIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
IV ++Y+++ + D +R E +F+
Sbjct: 123 EIVQAIYKMVSSVMKMPEDESTPEKRTEKIFR 154
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 178 RYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGSTYLF-- 235
+ RP+ ++ L +T F+E EI++ Y+ F +CP+G + + FK IY FFP G F
Sbjct: 7 KLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAE 66
Query: 236 HVGCTIKAECPTGTIR----------------QDTFKGIYAKFFPCGSTYL-KAECPTGT 278
HV T A GTI + K ++ + G+ Y+ KAE
Sbjct: 67 HVFRTFDANG-DGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEML--E 123
Query: 279 IRQDTFKGIYA--KFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKG 325
I Q +K + + K ++ + +F +D N+ G L+ E+F++G
Sbjct: 124 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRG 172
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 13/149 (8%)
Query: 273 ECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG 332
+CP+G + + F+ IY +FFP G S +A YVFN D +K G+++F++F+ LS+ RG
Sbjct: 37 DCPSGHLNKSEFQKIYKQFFPFGDPS-AFAEYVFNVFDADKNGYIDFKEFICALSVTSRG 95
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+KL W F LYD++ +G+IS D++ IV ++Y+++G+ D +RV
Sbjct: 96 ELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRV------ 149
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKG 421
+ +FN +D NK G L E+F +G
Sbjct: 150 ------NKIFNMMDKNKDGQLTLEEFCEG 172
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 57/90 (63%)
Query: 397 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456
+A YVFN D +K G+++F++F+ LS+ RG +KL W F LYD++ +G+IS D++
Sbjct: 64 FAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLR 123
Query: 457 IVSSVYELMGTYAYRAFDSGMVAQRVEYLF 486
IV ++Y+++G+ D +RV +F
Sbjct: 124 IVDAIYKMVGSMVKLPEDEDTPEKRVNKIF 153
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 184 IEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG-----STYLFHVG 238
++ L R+T+F + E+++ Y+ F +CP+G + + F+ IY +FFP G + Y+F+V
Sbjct: 13 LQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVF 72
Query: 239 CTIKAE--------CPTGTIRQDTF--KGIYA-KFFPCGSTYLKAECPTGTIRQDTFK-- 285
K C + K I+A + + + L + I +K
Sbjct: 73 DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMV 132
Query: 286 GIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKG 325
G K + + + +FN +D NK G L E+F +G
Sbjct: 133 GSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEG 172
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 87/149 (58%), Gaps = 13/149 (8%)
Query: 273 ECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG 332
+CP+G + F+ IY +FFP G + ++A +VFN D NK G + F +F++ LS+ RG
Sbjct: 37 DCPSGQLDAAGFQKIYKQFFPFGDPT-KFATFVFNVFDENKDGRIEFSEFIQALSVTSRG 95
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+ +EKLRW F LYD++ DG I+++++ +IV ++Y+++G + +RV+ +F +
Sbjct: 96 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAM 155
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKG 421
+D N G L ++F +G
Sbjct: 156 ------------MDKNADGKLTLQEFQEG 172
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 60/91 (65%)
Query: 396 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLY 455
++A +VFN D NK G + F +F++ LS+ RG+ +EKLRW F LYD++ DG I+++++
Sbjct: 63 KFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEML 122
Query: 456 NIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 486
+IV ++Y+++G + +RV+ +F
Sbjct: 123 DIVDAIYQMVGNTVELPEEENTPEKRVDRIF 153
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 178 RYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG-----ST 232
+ +P+ +E L R T F+E E+++ Y+ F +CP+G + F+ IY +FFP G +T
Sbjct: 7 KLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFAT 66
Query: 233 YLFHV 237
++F+V
Sbjct: 67 FVFNV 71
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 88/149 (59%), Gaps = 13/149 (8%)
Query: 273 ECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG 332
+CP+G + ++ F IY +FFP G S +A+++F D + GF++FE+F+ LS RG
Sbjct: 37 DCPSGQLAREDFVKIYKQFFPFG-SPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRG 95
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+ EEKL W F LYD+N DG I+ D++ IV+SVY++MG+ D RV+ +F++
Sbjct: 96 TLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKL 155
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKG 421
+D N+ G++ ++F +G
Sbjct: 156 ------------MDKNEDGYITLDEFREG 172
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%)
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
S + +A+++F D + GF++FE+F+ LS RG+ EEKL W F LYD+N DG I+ D
Sbjct: 60 SPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFD 119
Query: 453 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
++ IV+SVY++MG+ D RV+ +F+
Sbjct: 120 EMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFK 154
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 176 SPRYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGS 231
+ + + L ++T F EI++ ++ F +CP+G + ++ F IY +FFP GS
Sbjct: 5 TSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGS 60
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 268 TYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLS 327
++LK +CPTG I Q F+ IYAKFFP T YA +VF + D N G L+F+++V L
Sbjct: 41 SFLK-DCPTGRITQQQFQSIYAKFFP-DTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALH 98
Query: 328 ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAF--DSGMVAQR 385
G +KL W F LYD++G+G ISK+++ IV ++++ + + D +R
Sbjct: 99 XTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLLPDDENTPEKR 158
Query: 386 VEYLFQ 391
E +++
Sbjct: 159 AEKIWK 164
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 397 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456
YA +VF + D N G L+F+++V L G +KL W F LYD++G+G ISK+++
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 131
Query: 457 IVSSVYELMGTYAYRAF--DSGMVAQRVEYLFQ 487
IV ++++ + + D +R E +++
Sbjct: 132 IVXAIFKXITPEDVKLLPDDENTPEKRAEKIWK 164
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 184 IEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFP 228
+E L TKFSE E+ Y++F +CPTG I Q F+ IYAKFFP
Sbjct: 21 LEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFP 65
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 268 TYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLS 327
++LK ECP+G I + F+ IY+KFFP YA +VF + D N G L+F+++V L
Sbjct: 33 SFLK-ECPSGRITRQEFQTIYSKFFPEADPK-AYAQHVFRSFDANSDGTLDFKEYVIALH 90
Query: 328 ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 370
+ G +KL W F LYD++G+G ISK+++ IV+++++++
Sbjct: 91 MTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMIS 133
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 49/76 (64%)
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ + YA +VF + D N G L+F+++V L + G +KL W F LYD++G+G IS
Sbjct: 58 EADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTIS 117
Query: 451 KDDLYNIVSSVYELMG 466
K+++ IV+++++++
Sbjct: 118 KNEVLEIVTAIFKMIS 133
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 184 IEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG--STYLFHV 237
+E L TKF+E E+ Y++F ECP+G I + F+ IY+KFFP Y HV
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Query: 268 TYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLS 327
++LK ECP+G I + F+ IY+KFFP YA +VF + D N G L+F+++V L
Sbjct: 34 SFLK-ECPSGRITRQEFQTIYSKFFPEADPK-AYAQHVFRSFDANSDGTLDFKEYVIALH 91
Query: 328 ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 369
+ G +KL W F LYD++G+G ISK+++ IV+++++++
Sbjct: 92 MTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 133
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 49/75 (65%)
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ + YA +VF + D N G L+F+++V L + G +KL W F LYD++G+G IS
Sbjct: 59 EADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTIS 118
Query: 451 KDDLYNIVSSVYELM 465
K+++ IV+++++++
Sbjct: 119 KNEVLEIVTAIFKMI 133
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 184 IEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG--STYLFHV 237
+E L TKF+E E+ Y++F ECP+G I + F+ IY+KFFP Y HV
Sbjct: 14 LEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 69
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Query: 268 TYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLS 327
++LK ECP+G I + F+ IY+KFFP YA +VF + D N G L+F+++V L
Sbjct: 33 SFLK-ECPSGRITRQEFQTIYSKFFPEADPK-AYAQHVFRSFDANSDGTLDFKEYVIALH 90
Query: 328 ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 369
+ G +KL W F LYD++G+G ISK+++ IV+++++++
Sbjct: 91 MTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 132
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 49/75 (65%)
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ + YA +VF + D N G L+F+++V L + G +KL W F LYD++G+G IS
Sbjct: 58 EADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTIS 117
Query: 451 KDDLYNIVSSVYELM 465
K+++ IV+++++++
Sbjct: 118 KNEVLEIVTAIFKMI 132
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 184 IEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG--STYLFHV 237
+E L TKF+E E+ Y++F ECP+G I + F+ IY+KFFP Y HV
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Query: 268 TYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLS 327
++LK ECP+G I + F+ IY+KFFP YA +VF + D N G L+F+++V L
Sbjct: 33 SFLK-ECPSGRITRQEFQTIYSKFFPEADPK-AYAQHVFRSFDANSDGTLDFKEYVIALH 90
Query: 328 ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 369
+ G +KL W F LYD++G+G ISK+++ IV+++++++
Sbjct: 91 MTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 132
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 49/75 (65%)
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ + YA +VF + D N G L+F+++V L + G +KL W F LYD++G+G IS
Sbjct: 58 EADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTIS 117
Query: 451 KDDLYNIVSSVYELM 465
K+++ IV+++++++
Sbjct: 118 KNEVLEIVTAIFKMI 132
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 184 IEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG--STYLFHV 237
+E L TKF+E E+ Y++F ECP+G I + F+ IY+KFFP Y HV
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 268 TYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLS 327
++LK ECP+G I + F+ IY+KFFP YA +VF + D N G L+F+ +V L
Sbjct: 33 SFLK-ECPSGRITRQEFQTIYSKFFPEADPK-AYAQHVFRSFDANSDGTLDFKQYVIALH 90
Query: 328 ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 370
+ G +KL W F LYD++G+G ISK+++ IV+++++++
Sbjct: 91 MTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMIS 133
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%)
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ + YA +VF + D N G L+F+ +V L + G +KL W F LYD++G+G IS
Sbjct: 58 EADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTIS 117
Query: 451 KDDLYNIVSSVYELMG 466
K+++ IV+++++++
Sbjct: 118 KNEVLEIVTAIFKMIS 133
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 184 IEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG--STYLFHV 237
+E L TKF+E E+ Y++F ECP+G I + F+ IY+KFFP Y HV
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Query: 268 TYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLS 327
++LK ECP+G I + F+ IY+KFFP YA +VF + D N G L+F+ +V L
Sbjct: 33 SFLK-ECPSGRITRQEFQTIYSKFFPEADPK-AYAQHVFRSFDANSDGTLDFKQYVIALH 90
Query: 328 ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 369
+ G +KL W F LYD++G+G ISK+++ IV+++++++
Sbjct: 91 MTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMI 132
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%)
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ + YA +VF + D N G L+F+ +V L + G +KL W F LYD++G+G IS
Sbjct: 58 EADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTIS 117
Query: 451 KDDLYNIVSSVYELM 465
K+++ IV+++++++
Sbjct: 118 KNEVLEIVTAIFKMI 132
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 184 IEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG--STYLFHV 237
+E L TKF+E E+ Y++F ECP+G I + F+ IY+KFFP Y HV
Sbjct: 13 LEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV 68
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 20/160 (12%)
Query: 265 CGSTYLK--AECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDF 322
C Y K ECP+G + FK + S+ +Y +F T D NK G+++F ++
Sbjct: 16 CHQWYKKFMTECPSGQLTLYEFKQFFG-LKNLSPSANKYVEQMFETFDFNKDGYIDFMEY 74
Query: 323 VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMV 382
V LS++ +G ++KLRW F LYD++G+G I + +L NI+ ++ RA +
Sbjct: 75 VAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAI---------RAINRCNE 125
Query: 383 AQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
A ++ + + + VF+ +D N G L+ E+F++G+
Sbjct: 126 A--------MTAEEFTNMVFDKIDINGDGELSLEEFMEGV 157
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%)
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
S +Y +F T D NK G+++F ++V LS++ +G ++KLRW F LYD++G+G I +
Sbjct: 49 SANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRG 108
Query: 453 DLYNIVSSV 461
+L NI+ ++
Sbjct: 109 ELLNIIKAI 117
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 273 ECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG 332
ECP+GT+ FK + P + +Y +F D N ++F ++V L+++ RG
Sbjct: 34 ECPSGTLFMHEFKRFFK--VPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRG 91
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+ E KL+W F +YD + +G I + +L +IV S+Y+L +A + A++ L +
Sbjct: 92 TLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKL-----KKACSVEVEAEQQGKL--L 144
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKG 421
+ + +F +D N G L+ +FV+G
Sbjct: 145 TPEEVVDRIFLLVDENGDGQLSLNEFVEG 173
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 396 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLY 455
+Y +F D N ++F ++V L+++ RG+ E KL+W F +YD + +G I + +L
Sbjct: 59 QYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELL 118
Query: 456 NIVSSVYEL 464
+IV S+Y+L
Sbjct: 119 DIVESIYKL 127
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 273 ECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG 332
E P+G FK + + ++ V+NT D NK GF++F +F+ ++++ +
Sbjct: 31 EYPSGLQTLHEFKTLLG-LQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQE 89
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
E+KL+W F LYD +G+G I K++L ++ +V L G +
Sbjct: 90 KMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQT------------------L 131
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
S + + + VF+ +D N G L E+F+ G++
Sbjct: 132 SPEEFINLVFHKIDINNDGELTLEEFINGMA 162
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 396 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLY 455
++ V+NT D NK GF++F +F+ ++++ + E+KL+W F LYD +G+G I K++L
Sbjct: 57 KHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELL 116
Query: 456 NIVSSVYELMG 466
++ +V L G
Sbjct: 117 DMFMAVQALNG 127
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 332 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 391
G+ EKL+W F LYDIN DG I+K+++ I+ S+Y++MG + Y A+ VE F+
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFE 64
Query: 392 VSTQRYAHYVFNTLDHNKTGFLNFEDFVKG 421
+D N+ G + E+F++
Sbjct: 65 ------------KMDRNQDGVVTIEEFLEA 82
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 428 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
G+ EKL+W F LYDIN DG I+K+++ I+ S+Y++MG + Y A+ VE F+
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFE 64
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 362
V + D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS +L+ ++
Sbjct: 44 VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 102
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 458
V + D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS +L+ ++
Sbjct: 44 VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 102
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 352 VISKDDLYNI--VSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQR----YAHYVFNTL 405
++++D ++++ + ++YEL + D G++ + L T + +A VF+
Sbjct: 4 LLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLF 63
Query: 406 DHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
D G L FE+F + LS+ + ++K+ + F LYD+ G I + ++ +V +
Sbjct: 64 DTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVA 119
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 272 AECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR 331
A G I ++ F+ F +A VF+ D G L FE+F + LS+
Sbjct: 29 AVIDDGLINKEEFQ---LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHP 85
Query: 332 GSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+ ++K+ + F LYD+ G I + ++ +V +
Sbjct: 86 NAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVA 119
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 362
V + D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS +L+ ++
Sbjct: 43 VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 101
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 458
V + D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS +L+ ++
Sbjct: 43 VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 101
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 362 VSSVYELMGTYAYRAFDSGMVAQRVEY---LFQVSTQR--YAHYVFNTLDHNKTGFLNFE 416
V ++YEL + D G++ + E+ LF+ +R +A +F+ D + G + F
Sbjct: 36 VEALYELFKKLSSSIIDDGLI-HKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFG 94
Query: 417 DFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSSV 461
+FV+ L + + EK+++ F LYD+ G I +++L +V ++
Sbjct: 95 EFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL 140
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 301 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLY 359
+A +F+ D + G + F +FV+ L + + EK+++ F LYD+ G I +++L
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 360 NIVSSV 365
+V ++
Sbjct: 135 EMVVAL 140
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 362 VSSVYELMGTYAYRAFDSGMVAQRVEY---LFQVSTQR--YAHYVFNTLDHNKTGFLNFE 416
V ++YEL + D G++ + E+ LF+ +R +A +F+ D + G + F
Sbjct: 36 VEALYELFKKLSSSIIDDGLI-HKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFG 94
Query: 417 DFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSSV 461
+FV+ L + + EK+++ F LYD+ G I +++L +V ++
Sbjct: 95 EFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL 140
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 301 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLY 359
+A +F+ D + G + F +FV+ L + + EK+++ F LYD+ G I +++L
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 360 NIVSSV 365
+V ++
Sbjct: 135 EMVVAL 140
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 352 VISKDDLYNI--VSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQR----YAHYVFNTL 405
++++D ++++ + ++YEL + D G++ + L T + +A VF+
Sbjct: 35 LLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLF 94
Query: 406 DHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
D G L FE+F + LS+ + ++K+ + F LYD+ G I + ++ +V +
Sbjct: 95 DTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVA 150
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 272 AECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR 331
A G I ++ F+ F +A VF+ D G L FE+F + LS+
Sbjct: 60 AVIDDGLINKEEFQ---LALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHP 116
Query: 332 GSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+ ++K+ + F LYD+ G I + ++ +V +
Sbjct: 117 NAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVA 150
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 302 AHYVFNTLDHNKTGFLNFEDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
V + D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS +L+
Sbjct: 55 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 114
Query: 361 IV 362
++
Sbjct: 115 VL 116
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 398 AHYVFNTLDHNKTGFLNFEDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456
V + D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS +L+
Sbjct: 55 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 114
Query: 457 IV 458
++
Sbjct: 115 VL 116
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 302 AHYVFNTLDHNKTGFLNFEDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
V + D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS +L+
Sbjct: 54 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 113
Query: 361 IV 362
++
Sbjct: 114 VL 115
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 398 AHYVFNTLDHNKTGFLNFEDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456
V + D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS +L+
Sbjct: 54 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 113
Query: 457 IV 458
++
Sbjct: 114 VL 115
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 375 RAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKL 434
R+ D+ Q + L V Q A V D N +G L+ E+F++ L + E +
Sbjct: 52 RSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVI 111
Query: 435 RWIFCLYDINGDGVISKDDLYNIVS 459
F D +GDGV++ DDL + S
Sbjct: 112 AAAFAKLDRSGDGVVTVDDLRGVYS 136
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 302 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
A V D N +G L+ E+F++ L + E + F D +GDGV++ DDL +
Sbjct: 75 AEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGV 134
Query: 362 VS 363
S
Sbjct: 135 YS 136
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 364 SVYE 367
++ E
Sbjct: 112 NLGE 115
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 352
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 353 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 412
Query: 461 VYE 463
+ E
Sbjct: 413 LGE 415
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 364 SVYE 367
++ E
Sbjct: 412 NLGE 415
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 352
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 353 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 412
Query: 461 VYE 463
+ E
Sbjct: 413 LGE 415
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 364 SVYE 367
++ E
Sbjct: 412 NLGE 415
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 318 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 353
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 354 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 413
Query: 461 VYE 463
+ E
Sbjct: 414 LGE 416
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 353 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 412
Query: 364 SVYE 367
++ E
Sbjct: 413 NLGE 416
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 352
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 353 INEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 412
Query: 461 VYE 463
+ E
Sbjct: 413 LGE 415
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 364 SVYE 367
++ E
Sbjct: 412 NLGE 415
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 308 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 343
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 344 INEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 403
Query: 461 VYE 463
+ E
Sbjct: 404 LGE 406
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 343 MINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 402
Query: 364 SVYE 367
++ E
Sbjct: 403 NLGE 406
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 280 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 315
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 316 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 375
Query: 461 VYELM 465
+ E +
Sbjct: 376 LGEKL 380
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 315 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 374
Query: 364 SVYELM 369
++ E +
Sbjct: 375 NLGEKL 380
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 351
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 352 INEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 411
Query: 461 VYE 463
+ E
Sbjct: 412 LGE 414
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 351 MINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 410
Query: 364 SVYE 367
++ E
Sbjct: 411 NLGE 414
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 283 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 318
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 319 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 378
Query: 461 VYE 463
+ E
Sbjct: 379 LGE 381
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 318 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 377
Query: 364 SVYE 367
++ E
Sbjct: 378 NLGE 381
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 283 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 318
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 319 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 378
Query: 461 VYE 463
+ E
Sbjct: 379 LGE 381
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 318 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 377
Query: 364 SVYE 367
++ E
Sbjct: 378 NLGE 381
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 31/126 (24%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 352
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE----EEKLRWIFCLYDINGDGVISKDDLYNI 457
N +D + G ++F +F L+++ R + EE++R F ++D +G+G IS +L ++
Sbjct: 353 INEVDADGNGTIDFPEF---LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV 409
Query: 458 VSSVYE 463
++++ E
Sbjct: 410 MTNLGE 415
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE----EEKLRWIFCLYDINGDGVISKDDLYN 360
+ N +D + G ++F +F L+++ R + EE++R F ++D +G+G IS +L +
Sbjct: 352 MINEVDADGNGTIDFPEF---LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 361 IVSSVYE 367
+++++ E
Sbjct: 409 VMTNLGE 415
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 31/126 (24%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 351
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE----EEKLRWIFCLYDINGDGVISKDDLYNI 457
N +D + G ++F +F L+++ R + EE++R F ++D +G+G IS +L ++
Sbjct: 352 INEVDADGDGTIDFPEF---LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV 408
Query: 458 VSSVYE 463
++++ E
Sbjct: 409 MTNLGE 414
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE----EEKLRWIFCLYDINGDGVISKDDLYN 360
+ N +D + G ++F +F L+++ R + EE++R F ++D +G+G IS +L +
Sbjct: 351 MINEVDADGDGTIDFPEF---LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH 407
Query: 361 IVSSVYE 367
+++++ E
Sbjct: 408 VMTNLGE 414
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 31/126 (24%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 352
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRG----SEEEKLRWIFCLYDINGDGVISKDDLYNI 457
N +D + G ++F +F L+++ R EE++R F ++D +G+G IS +L ++
Sbjct: 353 INEVDADGDGTIDFPEF---LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV 409
Query: 458 VSSVYE 463
++++ E
Sbjct: 410 MTNLGE 415
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRG----SEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ N +D + G ++F +F L+++ R EE++R F ++D +G+G IS +L +
Sbjct: 352 MINEVDADGDGTIDFPEF---LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 361 IVSSVYE 367
+++++ E
Sbjct: 409 VMTNLGE 415
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 24/122 (19%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 47
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 461
N +D + G ++F +F+ ++ + ++ E++R F ++D +G+G IS +L ++++++
Sbjct: 48 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNL 107
Query: 462 YE 463
E
Sbjct: 108 GE 109
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 31/126 (24%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 351
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE----EEKLRWIFCLYDINGDGVISKDDLYNI 457
N +D + G ++F +F L+++ R + EE++R F ++D +G+G IS +L ++
Sbjct: 352 INEVDADGDGTIDFPEF---LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHV 408
Query: 458 VSSVYE 463
++++ E
Sbjct: 409 MTNLGE 414
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE----EEKLRWIFCLYDINGDGVISKDDLYN 360
+ N +D + G ++F +F L+++ R + EE++R F ++D +G+G IS +L +
Sbjct: 351 MINEVDADGDGTIDFPEF---LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH 407
Query: 361 IVSSVYE 367
+++++ E
Sbjct: 408 VMTNLGE 414
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 25/122 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 461
N +D + G ++F +F+ ++ + SEEE +R F ++D +G+G IS +L ++++++
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDSEEE-IREAFRVFDKDGNGFISAAELRHVMTNL 110
Query: 462 YE 463
E
Sbjct: 111 GE 112
Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+ N +D + G ++F +F+ ++ + SEEE +R F ++D +G+G IS +L +++++
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDSEEE-IREAFRVFDKDGNGFISAAELRHVMTN 109
Query: 365 VYE 367
+ E
Sbjct: 110 LGE 112
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EEKL+ F ++D +G+G IS +L +++++
Sbjct: 52 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 33.1 bits (74), Expect = 0.38, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EEKL+ F ++D +G+G IS +L ++++
Sbjct: 51 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMT 110
Query: 364 SVYE 367
++ E
Sbjct: 111 NLGE 114
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 30/138 (21%)
Query: 327 SILCRGSEEEKLRWIFCLYDINGDGVISKDDL---YNIVSSVYELMGTYAYRAFDSGMVA 383
S L E ++L IF D NGDG + K +L YN++ + +G
Sbjct: 346 SKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELK---------- 395
Query: 384 QRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE----EEKLRWIFC 439
+ + + +D +K G++ + +F+ +C + EE+LR F
Sbjct: 396 ---------NVEEEVDNILKEVDFDKNGYIEYSEFIS----VCMDKQILFSEERLRRAFN 442
Query: 440 LYDINGDGVISKDDLYNI 457
L+D + G I+K++L N+
Sbjct: 443 LFDTDKSGKITKEELANL 460
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 34/126 (26%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE----EEKLRWIFCLYDINGDGVISKDDLYN 360
+ +D +K G++ + +F+ +C + EE+LR F L+D + G I+K++L N
Sbjct: 404 ILKEVDFDKNGYIEYSEFIS----VCMDKQILFSEERLRRAFNLFDTDKSGKITKEELAN 459
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+ L +S + + V D NK ++F++FV
Sbjct: 460 LFG-------------------------LTSISEKTWND-VLGEADQNKDNMIDFDEFVS 493
Query: 421 GLSILC 426
+ +C
Sbjct: 494 MMHKIC 499
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 461 VYELM 465
+ E +
Sbjct: 113 LGEXL 117
Score = 32.0 bits (71), Expect = 0.80, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 364 SVYELM 369
++ E +
Sbjct: 112 NLGEXL 117
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 461 VYELM 465
+ E +
Sbjct: 112 LGEXL 116
Score = 32.0 bits (71), Expect = 0.80, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 364 SVYELM 369
++ E +
Sbjct: 111 NLGEXL 116
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 32.0 bits (71), Expect = 0.84, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 110
Query: 364 SVYE 367
++ E
Sbjct: 111 NLGE 114
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
Score = 32.0 bits (71), Expect = 0.86, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 364 SVYE 367
++ E
Sbjct: 112 NLGE 115
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
Score = 32.0 bits (71), Expect = 0.84, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 364 SVYE 367
++ E
Sbjct: 112 NLGE 115
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
Score = 32.0 bits (71), Expect = 0.85, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 364 SVYE 367
++ E
Sbjct: 112 NLGE 115
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
Score = 32.0 bits (71), Expect = 0.90, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 364 SVYE 367
++ E
Sbjct: 112 NLGE 115
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 20 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 55
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 56 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 115
Query: 461 VYE 463
+ E
Sbjct: 116 LGE 118
Score = 32.0 bits (71), Expect = 0.90, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 55 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 114
Query: 364 SVYE 367
++ E
Sbjct: 115 NLGE 118
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
Score = 32.0 bits (71), Expect = 0.90, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 364 SVYE 367
++ E
Sbjct: 112 NLGE 115
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
Score = 31.6 bits (70), Expect = 0.90, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111
Query: 364 SVYE 367
++ E
Sbjct: 112 NLGE 115
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 37.4 bits (85), Expect = 0.021, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 18 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 53
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 54 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 113
Query: 461 VYE 463
+ E
Sbjct: 114 LGE 116
Score = 31.6 bits (70), Expect = 0.94, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 53 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 112
Query: 364 SVYE 367
++ E
Sbjct: 113 NLGE 116
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 48
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 49 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 108
Query: 461 VYE 463
+ E
Sbjct: 109 LGE 111
Score = 31.6 bits (70), Expect = 0.93, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 48 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 107
Query: 364 SVYE 367
++ E
Sbjct: 108 NLGE 111
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 49
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 50 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 109
Query: 461 VYE 463
+ E
Sbjct: 110 LGE 112
Score = 31.6 bits (70), Expect = 0.94, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 49 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 108
Query: 364 SVYE 367
++ E
Sbjct: 109 NLGE 112
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 31.6 bits (70), Expect = 0.94, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 364 SVYE 367
++ E
Sbjct: 111 NLGE 114
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 31.6 bits (70), Expect = 0.94, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 364 SVYE 367
++ E
Sbjct: 111 NLGE 114
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 22 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 57
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 58 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 117
Query: 461 VYE 463
+ E
Sbjct: 118 LGE 120
Score = 31.6 bits (70), Expect = 0.94, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 57 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 116
Query: 364 SVYE 367
++ E
Sbjct: 117 NLGE 120
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 31.6 bits (70), Expect = 0.94, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 364 SVYE 367
++ E
Sbjct: 111 NLGE 114
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 37.0 bits (84), Expect = 0.023, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
Score = 31.6 bits (70), Expect = 0.93, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
Query: 364 SVYE 367
++ E
Sbjct: 112 NLGE 115
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.023, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 31.6 bits (70), Expect = 0.93, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 51 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 110
Query: 364 SVYE 367
++ E
Sbjct: 111 NLGE 114
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 21/135 (15%)
Query: 327 SILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRV 386
S L E ++L IF D NGDG + + +L + ELM M Q
Sbjct: 349 SKLTSQDETKELTAIFHKMDKNGDGQLDRAEL---IEGYKELMR----------MKGQDA 395
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL----SILCRGSEEEKLRWIFCLYD 442
L + + V + +D +K G++ + +FV ++L R E+L F ++D
Sbjct: 396 SMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERAFRMFD 451
Query: 443 INGDGVISKDDLYNI 457
+ G IS +L I
Sbjct: 452 SDNSGKISSTELATI 466
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 21/135 (15%)
Query: 327 SILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRV 386
S L E ++L IF D NGDG + + +L + ELM M Q
Sbjct: 350 SKLTSQDETKELTAIFHKMDKNGDGQLDRAEL---IEGYKELMR----------MKGQDA 396
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL----SILCRGSEEEKLRWIFCLYD 442
L + + V + +D +K G++ + +FV ++L R E+L F ++D
Sbjct: 397 SMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERAFRMFD 452
Query: 443 INGDGVISKDDLYNI 457
+ G IS +L I
Sbjct: 453 SDNSGKISSTELATI 467
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 48
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE+L+ F ++D +G+G IS +L +++++
Sbjct: 49 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTN 108
Query: 461 VYE 463
+ E
Sbjct: 109 LGE 111
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE+L+ F ++D +G+G IS +L ++++
Sbjct: 48 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT 107
Query: 364 SVYE 367
++ E
Sbjct: 108 NLGE 111
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 47
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 48 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 107
Query: 461 VYE 463
+ E
Sbjct: 108 LGE 110
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 47 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 106
Query: 364 SVYE 367
++ E
Sbjct: 107 NLGE 110
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 49
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 50 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 109
Query: 461 VYE 463
+ E
Sbjct: 110 LGE 112
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 49 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 108
Query: 364 SVYE 367
++ E
Sbjct: 109 NLGE 112
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 15 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 50
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 51 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 110
Query: 461 VYE 463
+ E
Sbjct: 111 LGE 113
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 50 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 109
Query: 364 SVYE 367
++ E
Sbjct: 110 NLGE 113
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 49
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 50 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 109
Query: 461 VYE 463
+ E
Sbjct: 110 LGE 112
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 49 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 108
Query: 364 SVYE 367
++ E
Sbjct: 109 NLGE 112
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE+L+ F ++D +G+G IS +L +++++
Sbjct: 52 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE+L+ F ++D +G+G IS +L ++++
Sbjct: 51 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT 110
Query: 364 SVYE 367
++ E
Sbjct: 111 NLGE 114
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 36.6 bits (83), Expect = 0.029, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L +++++
Sbjct: 52 INEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 51 MINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 110
Query: 364 SVYE 367
++ E
Sbjct: 111 NLGE 114
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 36.6 bits (83), Expect = 0.029, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 28/120 (23%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ +D + +G ++FE+F V+ + +G EE+L +F ++D N DG I ++L
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAE 117
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
I +RA + + +E L + D N G ++F++F+K
Sbjct: 118 I------------FRASGEHVTDEEIESLMKDG------------DKNNDGRIDFDEFLK 153
Score = 36.2 bits (82), Expect = 0.041, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDIN 444
L Q T+ + +D + +G ++FE+F V+ + +G EE+L +F ++D N
Sbjct: 46 LGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRN 105
Query: 445 GDGVISKDDLYNI 457
DG I ++L I
Sbjct: 106 ADGYIDAEELAEI 118
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 36.6 bits (83), Expect = 0.032, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 31/126 (24%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FALFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRG----SEEEKLRWIFCLYDINGDGVISKDDLYNI 457
N +D + G ++F +F LS++ R EE+L F ++D +G+G+IS +L ++
Sbjct: 52 INEVDADGNGTIDFPEF---LSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHV 108
Query: 458 VSSVYE 463
++++ E
Sbjct: 109 MTNLGE 114
Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRG----SEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ N +D + G ++F +F LS++ R EE+L F ++D +G+G+IS +L +
Sbjct: 51 MINEVDADGNGTIDFPEF---LSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH 107
Query: 361 IVSSVYE 367
+++++ E
Sbjct: 108 VMTNLGE 114
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 36.6 bits (83), Expect = 0.032, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 31/126 (24%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FALFDKDGDGTITTKELGTVMRS------------------------LGQNPTEAELQDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRG----SEEEKLRWIFCLYDINGDGVISKDDLYNI 457
N +D + G ++F +F LS++ R EE+L F ++D +G+G+IS +L ++
Sbjct: 52 INEVDADGNGTIDFPEF---LSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHV 108
Query: 458 VSSVYE 463
++++ E
Sbjct: 109 MTNLGE 114
Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRG----SEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ N +D + G ++F +F LS++ R EE+L F ++D +G+G+IS +L +
Sbjct: 51 MINEVDADGNGTIDFPEF---LSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH 107
Query: 361 IVSSVYE 367
+++++ E
Sbjct: 108 VMTNLGE 114
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 21/135 (15%)
Query: 327 SILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRV 386
S L E ++L IF D NGDG + + +L + ELM M Q
Sbjct: 326 SKLTSQDETKELTAIFHKMDKNGDGQLDRAEL---IEGYKELMR----------MKGQDA 372
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL----SILCRGSEEEKLRWIFCLYD 442
L + + V + +D +K G++ + +FV ++L R E+L F ++D
Sbjct: 373 SMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERAFRMFD 428
Query: 443 INGDGVISKDDLYNI 457
+ G IS +L I
Sbjct: 429 SDNSGKISSTELATI 443
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 35.8 bits (81), Expect = 0.050, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 28/120 (23%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ +D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE 120
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
I+ RA ++ + +E L + S D N G ++F++F+K
Sbjct: 121 IL------------RATGEHVIEEDIEDLMKDS------------DKNNDGRIDFDEFLK 156
Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 28/126 (22%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F ++D +G G IS +L +V ++G Q T+ +
Sbjct: 26 FDMFDADGGGDISTKEL----GTVMRMLG--------------------QNPTKEELDAI 61
Query: 402 FNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
+D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L I
Sbjct: 62 IEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI 121
Query: 458 VSSVYE 463
+ + E
Sbjct: 122 LRATGE 127
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 35.8 bits (81), Expect = 0.050, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLS--ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 362
+ N +D + + F +F+ +S + C SE+E L F ++D NGDG+IS +L +++
Sbjct: 52 LMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLE-AFKVFDKNGDGLISAAELKHVL 110
Query: 363 SSVYE 367
+S+ E
Sbjct: 111 TSIGE 115
Score = 35.8 bits (81), Expect = 0.050, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLS--ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 458
+ N +D + + F +F+ +S + C SE+E L F ++D NGDG+IS +L +++
Sbjct: 52 LMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLE-AFKVFDKNGDGLISAAELKHVL 110
Query: 459 SSVYE 463
+S+ E
Sbjct: 111 TSIGE 115
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.8 bits (81), Expect = 0.061, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 29/129 (22%)
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
R E E+LR F +D + DG I+ DL N + ++ G + +E L
Sbjct: 6 RPEEIEELREAFREFDKDKDGYINCRDLGNCMRTM--------------GYMPTEME-LI 50
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEE---EKLRWIFCLYDING 445
++S Q ++ N G ++F+DFV+ G +L ++ ++LR F +D NG
Sbjct: 51 ELSQQ---------INMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNG 101
Query: 446 DGVISKDDL 454
DG IS +L
Sbjct: 102 DGEISTSEL 110
Score = 32.0 bits (71), Expect = 0.88, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 30/121 (24%)
Query: 309 LDHNKTGFLNFEDFVK--GLSILCRGSEE---EKLRWIFCLYDINGDGVISKDDLYNIVS 363
++ N G ++F+DFV+ G +L ++ ++LR F +D NGDG IS +L
Sbjct: 56 INMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELRE--- 112
Query: 364 SVYELMGTYAYRAFDSGMVAQR-VEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
A RA V R +E + + +D N G ++FE+FV+ +
Sbjct: 113 ---------AMRALLGHQVGHRDIEEIIR------------DVDLNGDGRVDFEEFVRMM 151
Query: 423 S 423
S
Sbjct: 152 S 152
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.4 bits (80), Expect = 0.070, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 29/129 (22%)
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
R E E+LR F +D + DG I+ DL N + ++ G + +E L
Sbjct: 6 RPEEIEELREAFREFDKDKDGYINCRDLGNCMRTM--------------GYMPTEME-LI 50
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEE---EKLRWIFCLYDING 445
++S Q ++ N G ++F+DFV+ G +L ++ ++LR F +D NG
Sbjct: 51 ELSQQ---------INMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNG 101
Query: 446 DGVISKDDL 454
DG IS +L
Sbjct: 102 DGEISTSEL 110
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 309 LDHNKTGFLNFEDFVK--GLSILCRGSEE---EKLRWIFCLYDINGDGVISKDDLYNIVS 363
++ N G ++F+DFV+ G +L ++ ++LR F +D NGDG IS +L
Sbjct: 56 INMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELR---E 112
Query: 364 SVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
++ +L+G QV R + +D N G ++FE+FV+ +S
Sbjct: 113 AMRKLLG-------------------HQVG-HRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 339 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYA 398
+ F L+D + +G IS +L ++ S+ G+ E
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSL--------------GLSPSEAEV---------- 49
Query: 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNI 457
+ + N +D + + F +F+ +S + ++ E++L F ++D NGDG+IS +L ++
Sbjct: 50 NDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHV 109
Query: 458 VSSVYE 463
++S+ E
Sbjct: 110 LTSIGE 115
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + + F +F+ +S + ++ E++L F ++D NGDG+IS +L ++++
Sbjct: 52 LMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLT 111
Query: 364 SVYE 367
S+ E
Sbjct: 112 SIGE 115
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 35.4 bits (80), Expect = 0.076, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 28/120 (23%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ +D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAE 117
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
I +RA + + +E L + D N G ++F++F+K
Sbjct: 118 I------------FRASGEHVTDEEIESLMKDG------------DKNNDGRIDFDEFLK 153
Score = 35.0 bits (79), Expect = 0.098, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDIN 444
L Q T+ + +D + +G ++FE+F V+ + +G EE+L F ++D N
Sbjct: 46 LGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRN 105
Query: 445 GDGVISKDDLYNI 457
DG I ++L I
Sbjct: 106 ADGYIDAEELAEI 118
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 35.0 bits (79), Expect = 0.10, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 28/120 (23%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ +D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGE 120
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
I+ RA + + +E L + S D N G ++F++F+K
Sbjct: 121 IL------------RATGEHVTEEDIEDLMKDS------------DKNNDGRIDFDEFLK 156
Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 28/126 (22%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F ++D +G G IS +L +V ++G Q T+ +
Sbjct: 26 FDMFDADGGGDISTKEL----GTVMRMLG--------------------QNPTKEELDAI 61
Query: 402 FNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
+D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L I
Sbjct: 62 IEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEI 121
Query: 458 VSSVYE 463
+ + E
Sbjct: 122 LRATGE 127
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 28/120 (23%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ +D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE 120
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
I+ RA + + +E L + S D N G ++F++F+K
Sbjct: 121 IL------------RATGEHVTEEDIEDLMKDS------------DKNNDGRIDFDEFLK 156
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 28/126 (22%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F ++D +G G IS +L +V ++G Q T+ +
Sbjct: 26 FDMFDADGGGDISTKEL----GTVMRMLG--------------------QNPTKEELDAI 61
Query: 402 FNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
+D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L I
Sbjct: 62 IEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI 121
Query: 458 VSSVYE 463
+ + E
Sbjct: 122 LRATGE 127
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 28/120 (23%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ +D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGE 117
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
I+ RA + + +E L + S D N G ++F++F+K
Sbjct: 118 IL------------RATGEHVTEEDIEDLMKDS------------DKNNDGRIDFDEFLK 153
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 28/126 (22%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F ++D +G G IS +L +V ++G Q T+ +
Sbjct: 23 FDMFDADGGGDISTKEL----GTVMRMLG--------------------QNPTKEELDAI 58
Query: 402 FNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
+D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L I
Sbjct: 59 IEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI 118
Query: 458 VSSVYE 463
+ + E
Sbjct: 119 LRATGE 124
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 34.7 bits (78), Expect = 0.13, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 28/120 (23%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ +D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L
Sbjct: 61 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGE 120
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
I+ RA + + +E L + S D N G ++F++F+K
Sbjct: 121 IL------------RATGEHVTEEDIEDLMKDS------------DKNNDGRIDFDEFLK 156
Score = 33.9 bits (76), Expect = 0.19, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 28/126 (22%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F ++D +G G IS +L +V ++G Q T+ +
Sbjct: 26 FDMFDADGGGDISTKEL----GTVMRMLG--------------------QNPTKEELDAI 61
Query: 402 FNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
+D + +G ++FE+F V+ + +G EE+L F ++D N DG I ++L I
Sbjct: 62 IEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEI 121
Query: 458 VSSVYE 463
+ + E
Sbjct: 122 LRATGE 127
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 33.9 bits (76), Expect = 0.21, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D + +G IS +L ++ S+ G+ E + +
Sbjct: 16 FALFDKDNNGSISSSELATVMRSL--------------GLSPSEAE----------VNDL 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + + F +F+ +S + ++ E++L F ++D NGDG+IS +L ++++S
Sbjct: 52 MNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS 111
Query: 461 VYE 463
+ E
Sbjct: 112 IGE 114
Score = 32.7 bits (73), Expect = 0.53, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + + F +F+ +S + ++ E++L F ++D NGDG+IS +L ++++
Sbjct: 51 LMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLT 110
Query: 364 SVYE 367
S+ E
Sbjct: 111 SIGE 114
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 59/123 (47%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRS------------------------LGQNPTEAELQDM 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ ++ + ++ EE+L+ F ++D + +G IS +L +++++
Sbjct: 53 INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDIN 444
L Q T + + +D + +G ++F++F V+ + +G EE+L +F ++D N
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKN 107
Query: 445 GDGVISKDDL 454
DG I D+L
Sbjct: 108 ADGYIDLDEL 117
Score = 33.5 bits (75), Expect = 0.26, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + +D + +G ++F++F V+ + +G EE+L +F ++D N DG I D+L
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDEL 117
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDIN 444
L Q T + + +D + +G ++F++F V+ + +G EE+L +F ++D N
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKN 107
Query: 445 GDGVISKDDL 454
DG I D+L
Sbjct: 108 ADGYIDLDEL 117
Score = 33.5 bits (75), Expect = 0.27, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + +D + +G ++F++F V+ + +G EE+L +F ++D N DG I D+L
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDEL 117
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 33.5 bits (75), Expect = 0.27, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 59/123 (47%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L ++ S L Q T+ +
Sbjct: 16 FSLFDKDGDGCITTRELGTVMRS------------------------LGQNPTEAELRDM 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
+ +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G +S +L ++++
Sbjct: 52 MSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTR 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 28.9 bits (63), Expect = 6.2, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ + +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G +S +L ++++
Sbjct: 51 MMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMT 110
Query: 364 SVYE 367
+ E
Sbjct: 111 RLGE 114
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 33.5 bits (75), Expect = 0.29, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D + +G IS +L ++ S+ G+ E + +
Sbjct: 16 FALFDKDNNGSISSSELATVMRSL--------------GLSPSEAE----------VNDL 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + + F +F+ +S + ++ E++L F ++D NGDG+IS +L ++++S
Sbjct: 52 MNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS 111
Query: 461 VYE 463
+ E
Sbjct: 112 IGE 114
Score = 32.3 bits (72), Expect = 0.65, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + + F +F+ +S + ++ E++L F ++D NGDG+IS +L ++++
Sbjct: 51 LMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLT 110
Query: 364 SVYE 367
S+ E
Sbjct: 111 SIGE 114
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 33.5 bits (75), Expect = 0.29, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDIN 444
L Q T + + +D + +G ++F++F V+ + +G EE+L +F ++D N
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKN 107
Query: 445 GDGVISKDDL 454
DG I D+L
Sbjct: 108 ADGYIDLDEL 117
Score = 33.1 bits (74), Expect = 0.33, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + +D + +G ++F++F V+ + +G EE+L +F ++D N DG I D+L
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDEL 117
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 10/133 (7%)
Query: 327 SILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRV 386
S L E ++L IF D N DG++ +D+L V +E M + DS + Q
Sbjct: 322 SKLTTLDETKQLTEIFRKLDTNNDGMLDRDEL---VRGYHEFM---RLKGVDSNSLIQNE 375
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGD 446
+ + + LD + +G + + +F+ E++ F ++D +G
Sbjct: 376 ----GSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGS 431
Query: 447 GVISKDDLYNIVS 459
G IS +L+ + S
Sbjct: 432 GKISTKELFKLFS 444
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 34/153 (22%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCR-------------GSE-EEKLRWIFCLYDINGD 350
+F LD N G L+ ++ V+G R GS E+++ + L D++G
Sbjct: 336 IFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGS 395
Query: 351 GVISKDDLYNIVSSVYELM------GTYAYRAFD---SGMVAQRVEYLFQVSTQRYAHY- 400
G I + I S++ + A++ FD SG ++ + LF++ +Q +
Sbjct: 396 GSIEYSEF--IASAIDRTILLSRERMERAFKMFDKDGSGKISTK--ELFKLFSQADSSIQ 451
Query: 401 ------VFNTLDHNKTGFLNFEDFVKGLSILCR 427
+ +D+NK G ++F +FV+ L R
Sbjct: 452 MEELESIIEQVDNNKDGEVDFNEFVEMLQNFVR 484
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 309 LDHNKTGFLNFEDFVK--GLSILCRGSEE---EKLRWIFCLYDINGDGVISKDDLYNIVS 363
++ N G ++F+DFV+ G +L ++ ++LR F +D NGDG IS +L
Sbjct: 70 INMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELR---E 126
Query: 364 SVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
++ +L+G QV R + +D N G ++FE+FV+ +S
Sbjct: 127 AMRKLLG-------------------HQVG-HRDIEEIIRDVDLNGDGRVDFEEFVRMMS 166
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 29/137 (21%)
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
R E E+LR F +D + DG I+ DL N + ++ G + +E L
Sbjct: 20 RPEEIEELREAFREFDKDKDGYINCRDLGNCMRTM--------------GYMPTEME-LI 64
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEE---EKLRWIFCLYDING 445
++S Q ++ N G ++F+DFV+ G +L ++ ++LR F +D NG
Sbjct: 65 ELSQQ---------INMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNG 115
Query: 446 DGVISKDDLYNIVSSVY 462
DG IS +L + +
Sbjct: 116 DGEISTSELREAMRKLL 132
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 32.7 bits (73), Expect = 0.44, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L + S L Q T+
Sbjct: 17 FSLFDKDGDGTITTKELGTVXRS------------------------LGQNPTEAELQDX 52
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ + + ++ EE++R F ++D +G+G IS +L ++ ++
Sbjct: 53 INEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN 112
Query: 461 VYE 463
+ E
Sbjct: 113 LGE 115
Score = 28.9 bits (63), Expect = 6.0, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
N +D + G ++F +F+ + + ++ EE++R F ++D +G+G IS +L ++ +++
Sbjct: 54 NEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL 113
Query: 366 YE 367
E
Sbjct: 114 GE 115
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 21/135 (15%)
Query: 327 SILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRV 386
S L E ++L IF D NGDG + + +L + G A D+ V V
Sbjct: 326 SKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDA-SXLDASAVEHEV 384
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL----SILCRGSEEEKLRWIFCLYD 442
+ V + +D +K G++ + +FV ++L R E+L F +D
Sbjct: 385 DQ------------VLDAVDFDKNGYIEYSEFVTVAXDRKTLLSR----ERLERAFRXFD 428
Query: 443 INGDGVISKDDLYNI 457
+ G IS +L I
Sbjct: 429 SDNSGKISSTELATI 443
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 32.7 bits (73), Expect = 0.49, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L + S L Q T+
Sbjct: 16 FSLFDKDGDGTITTKELGTVXRS------------------------LGQNPTEAELQDX 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G ++F +F+ + + ++ EE++R F ++D +G+G IS +L ++ ++
Sbjct: 52 INEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 28.9 bits (63), Expect = 6.4, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
N +D + G ++F +F+ + + ++ EE++R F ++D +G+G IS +L ++ +++
Sbjct: 53 NEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL 112
Query: 366 YE 367
E
Sbjct: 113 GE 114
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 32.3 bits (72), Expect = 0.58, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 27/117 (23%)
Query: 341 IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHY 400
+F D+NGDG +S +++ +AF S A + E L Q+
Sbjct: 5 LFKEIDVNGDGAVSYEEV----------------KAFVSKKRAIKNEQLLQL-------- 40
Query: 401 VFNTLDHNKTGFLNFEDFVKGL-SILCRGSEEEK--LRWIFCLYDINGDGVISKDDL 454
+F ++D + G ++ +F K SI + ++K L+ ++ L D++GDG ++K+++
Sbjct: 41 IFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV 97
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 23/145 (15%)
Query: 333 SEEEK--LRWIFCLYDINGDGVIS----------------KDDLYNIVSSV-YELMGTYA 373
+EE+K +R F L+D +G G I K+++ ++S + + GT
Sbjct: 23 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 374 YRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEK 433
+ F + M A+ + + ++ F D + +G + +D + L EE+
Sbjct: 83 FEEFLTMMTAK----MGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE 138
Query: 434 LRWIFCLYDINGDGVISKDDLYNIV 458
L+ + D N D I +D+ I+
Sbjct: 139 LQEMIAEADRNDDNEIDEDEFIRIM 163
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 29/130 (22%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
S+ ++ + F + D N DG I K+DL+++++S MG + GM+++
Sbjct: 4 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS----MGKNPTDEYLEGMMSE-------- 51
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISK 451
G +NF F+ G++ E+ +R F +D G I +
Sbjct: 52 ----------------APGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHE 95
Query: 452 DDLYNIVSSV 461
D L +++++
Sbjct: 96 DHLRELLTTM 105
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 327 SILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRV 386
S L E ++L IF D NGDG + + +L + Y + FD
Sbjct: 54 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELID----GYSKLSGEEVAVFD-------- 101
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL----SILCRGSEEEKLRWIFCLYD 442
L Q+ ++ A + D ++ G++++ +FV S+L + +KL F +D
Sbjct: 102 --LPQIESEVDA--ILGAADFDRNGYIDYSEFVTVAMDRKSLLSK----DKLESAFQKFD 153
Query: 443 INGDGVISKDDLYNI 457
+G+G IS D+L ++
Sbjct: 154 QDGNGKISVDELASV 168
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 38/132 (28%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGL----SILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ D ++ G++++ +FV S+L + +KL F +D +G+G IS D+L
Sbjct: 112 ILGAADFDRNGYIDYSEFVTVAMDRKSLLSK----DKLESAFQKFDQDGNGKISVDEL-- 165
Query: 361 IVSSVYEL--MGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDF 418
+SV+ L + + ++ SG +D N G ++FE+F
Sbjct: 166 --ASVFGLDHLESKTWKEMISG------------------------IDSNNDGDVDFEEF 199
Query: 419 VKGLSILCRGSE 430
K + LC +E
Sbjct: 200 CKMIQKLCSNNE 211
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 32.3 bits (72), Expect = 0.65, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 373 AYRAFD---SGMVAQR-----VEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424
A+ FD +G +A R + L Q T+ + ++N G LNF +F ++
Sbjct: 15 AFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAK 74
Query: 425 LCRGSE-EEKLRWIFCLYDINGDGVISKDDL 454
R ++ EE++R F ++D +GDG IS +L
Sbjct: 75 QMRETDTEEEMREAFKIFDRDGDGFISPAEL 105
Score = 32.3 bits (72), Expect = 0.67, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 310 DHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDL 358
++N G LNF +F ++ R ++ EE++R F ++D +GDG IS +L
Sbjct: 56 ENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAEL 105
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 32.3 bits (72), Expect = 0.66, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 27/117 (23%)
Query: 341 IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHY 400
+F D+NGDG +S +++ +AF S A + E L Q+
Sbjct: 5 LFKEIDVNGDGAVSYEEV----------------KAFVSKKRAIKNEQLLQL-------- 40
Query: 401 VFNTLDHNKTGFLNFEDFVKGL-SILCRGSEEEK--LRWIFCLYDINGDGVISKDDL 454
+F ++D + G ++ +F K SI + ++K L+ ++ L D++GDG ++K+++
Sbjct: 41 IFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV 97
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 32.0 bits (71), Expect = 0.80, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ +L + S L T+
Sbjct: 16 FSLFDKDGDGTITTKELGTVXRS------------------------LGCNPTEAELQDX 51
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N +D + G +NF +F+ + + ++ EE++R F ++D +G+G IS +L ++ ++
Sbjct: 52 INEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN 111
Query: 461 VYE 463
+ E
Sbjct: 112 LGE 114
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
N +D + G +NF +F+ + + ++ EE++R F ++D +G+G IS +L ++ +++
Sbjct: 53 NEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL 112
Query: 366 YE 367
E
Sbjct: 113 GE 114
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 32.0 bits (71), Expect = 0.82, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDIN 444
L Q T + + +D + +G ++F++F V+ + +G EE+L +F + D N
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKN 107
Query: 445 GDGVISKDDL 454
DG I D+L
Sbjct: 108 ADGYIDLDEL 117
Score = 31.6 bits (70), Expect = 0.93, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + +D + +G ++F++F V+ + +G EE+L +F + D N DG I D+L
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDEL 117
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 55/123 (44%), Gaps = 25/123 (20%)
Query: 342 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYV 401
F L+D +GDG I+ L ++ S L Q T+ +
Sbjct: 317 FSLFDKDGDGGITTKQLGTVMRS------------------------LGQNPTEAELQDM 352
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
N + + G ++F F+ ++ + ++ EE++R F ++ +G+G IS L +++++
Sbjct: 353 INEVGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTN 412
Query: 461 VYE 463
+ E
Sbjct: 413 LGE 415
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 32.0 bits (71), Expect = 0.89, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDIN 444
L Q T + + +D + +G ++F++F V+ + +G EE+L +F ++D N
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKN 107
Query: 445 GDGVISKDDL 454
DG I ++L
Sbjct: 108 ADGYIDLEEL 117
Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + +D + +G ++F++F V+ + +G EE+L +F ++D N DG I ++L
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEEL 117
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 16/131 (12%)
Query: 327 SILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRV 386
S L E ++L IF D NGDG + + +L + Y + FD + V
Sbjct: 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELID----GYSKLSGEEVAVFDLPQIESEV 392
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGD 446
+ + D ++ G++++ +FV ++KL F +D +G+
Sbjct: 393 DA------------ILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGN 440
Query: 447 GVISKDDLYNI 457
G IS D+L ++
Sbjct: 441 GKISVDELASV 451
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 30/128 (23%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+ D ++ G++++ +FV ++KL F +D +G+G IS D+L +S
Sbjct: 395 ILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDEL----AS 450
Query: 365 VYEL--MGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
V+ L + + ++ SG +D N G ++FE+F K +
Sbjct: 451 VFGLDHLESKTWKEMISG------------------------IDSNNDGDVDFEEFCKMI 486
Query: 423 SILCRGSE 430
LC +E
Sbjct: 487 QKLCSNNE 494
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 305 VFNTLDHNKTGFLNFEDF---VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
VF+ LD +K+GF+ ++ +KG S R ++ + + D +GDG I D+ +
Sbjct: 47 VFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTL 106
Query: 362 VS 363
V+
Sbjct: 107 VA 108
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 401 VFNTLDHNKTGFLNFEDF---VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
VF+ LD +K+GF+ ++ +KG S R ++ + + D +GDG I D+ +
Sbjct: 47 VFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTL 106
Query: 458 VS 459
V+
Sbjct: 107 VA 108
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 317 LNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363
L+FEDF+ LS+ + + K + F ++D + DG ++++DL +V+
Sbjct: 78 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN 125
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 413 LNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 459
L+FEDF+ LS+ + + K + F ++D + DG ++++DL +V+
Sbjct: 78 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN 125
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 284 FKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRW--- 340
F + + F T + +HY F D + G LN ED + ++ L E+ +L
Sbjct: 83 FLDLLSVFSDTATPDIK-SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 141
Query: 341 ------IFCLYDINGDGVISKDDLYNIVS 363
I DI+ DG I+ + +++S
Sbjct: 142 KQLIDNILEESDIDRDGTINLSEFQHVIS 170
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 398 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRW---------IFCLYDINGDGV 448
+HY F D + G LN ED + ++ L E+ +L I DI+ DG
Sbjct: 100 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 159
Query: 449 ISKDDLYNIVS 459
I+ + +++S
Sbjct: 160 INLSEFQHVIS 170
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 6 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
Query: 364 SV 365
++
Sbjct: 66 NL 67
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 459
+ N +D + G ++F +F+ ++ + ++ EE++R F ++D +G+G IS +L ++++
Sbjct: 6 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
Query: 460 SV 461
++
Sbjct: 66 NL 67
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDIN 444
L Q T + + +D + +G ++F++F V+ + +G EE+L +F ++D N
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKN 107
Query: 445 GDGVISKDDL 454
DG I ++L
Sbjct: 108 ADGYIDLEEL 117
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + +D + +G ++F++F V+ + +G EE+L +F ++D N DG I ++L
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEEL 117
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 24/122 (19%)
Query: 341 IFCLYDINGDGVISKD---DLYNIVSSVYELMGTYAYRAFDSG---------MVAQRVEY 388
+ +YD N G I+ D DL++ + S+ E +R DS + A +
Sbjct: 68 LLHMYDKNHSGEITFDEFKDLHHFILSMRE-----GFRKRDSSGDGRLDSNEVRAALLSS 122
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGV 448
+QVS Q + + D + G L F+D+V+ +CR +R +F YD G
Sbjct: 123 GYQVSEQTF-QALMRKFDRQRRGSLGFDDYVELSIFVCR------VRNVFAFYDRERTGQ 175
Query: 449 IS 450
++
Sbjct: 176 VT 177
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Query: 287 IYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSI---LCRGSEEEKLRWIFC 343
I FFP G + ++ TL H F ED K + S KL + F
Sbjct: 66 IINAFFPEGEDQVNFRGFM-RTLAH----FRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR 120
Query: 344 LYDINGDGVISKDDLYNIVSSVY------ELMGTYAYRAF 377
LYD++ D IS+D+L ++ + E +G+ A R
Sbjct: 121 LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTI 160
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 317 LNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363
L+FEDF+ LS+ + + K + F ++D + DG ++++DL +V+
Sbjct: 109 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN 156
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 413 LNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 459
L+FEDF+ LS+ + + K + F ++D + DG ++++DL +V+
Sbjct: 109 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN 156
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 284 FKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRW--- 340
F + + F T + +HY F D + G LN ED + ++ L E+ +L
Sbjct: 114 FLDLLSVFSDTATPDIK-SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 172
Query: 341 ------IFCLYDINGDGVISKDDLYNIVS 363
I DI+ DG I+ + +++S
Sbjct: 173 KQLIDNILEESDIDRDGTINLSEFQHVIS 201
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 398 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRW---------IFCLYDINGDGV 448
+HY F D + G LN ED + ++ L E+ +L I DI+ DG
Sbjct: 131 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 190
Query: 449 ISKDDLYNIVS 459
I+ + +++S
Sbjct: 191 INLSEFQHVIS 201
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDIN 444
L Q T + + +D + +G ++F++F V+ + +G EE+L +F ++D N
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKN 107
Query: 445 GDGVISKDDL 454
DG I ++L
Sbjct: 108 ADGYIDLEEL 117
Score = 30.4 bits (67), Expect = 2.1, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 305 VFNTLDHNKTGFLNFEDF----VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + +D + +G ++F++F V+ + +G EE+L +F ++D N DG I ++L
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEEL 117
>pdb|1JR8|A Chain A, Crystal Structure Of Erv2p
pdb|1JR8|B Chain B, Crystal Structure Of Erv2p
pdb|1JRA|A Chain A, Crystal Structure Of Erv2p
pdb|1JRA|B Chain B, Crystal Structure Of Erv2p
pdb|1JRA|C Chain C, Crystal Structure Of Erv2p
pdb|1JRA|D Chain D, Crystal Structure Of Erv2p
Length = 117
Score = 30.0 bits (66), Expect = 2.8, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 283 TFKGIYAKFFPCGTSSYRYAHYV 305
TF G+YA+ +PCG SY + +
Sbjct: 40 TFIGLYAELYPCGECSYHFVKLI 62
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY------ELMGTYAYRAF 377
S KL + F LYD++ D IS+D+L ++ + E +G+ A R
Sbjct: 110 SRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTI 160
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 429 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY------ELMGTYAYRAF 473
S KL + F LYD++ D IS+D+L ++ + E +G+ A R
Sbjct: 110 SRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTI 160
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 42/171 (24%)
Query: 279 IRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKL 338
++Q G + F P S + + D +NF +F +
Sbjct: 29 LQQALSNGTWTPFNPVTVRS------IISMFDRENKAGVNFSEFTGVWKYITDWQN---- 78
Query: 339 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYA 398
+F YD + G+I K++L +S + YR D ++
Sbjct: 79 --VFRTYDRDNSGMIDKNELKQALSG-------FGYRLSD-----------------QFH 112
Query: 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 449
+ D G + F+DF++G +L R ++ IF YD + DG I
Sbjct: 113 DILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD------IFRRYDTDQDGWI 157
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 42/171 (24%)
Query: 279 IRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKL 338
++Q G + F P S + + D +NF +F +
Sbjct: 48 LQQALSNGTWTPFNPVTVRS------IISMFDRENKAGVNFSEFTGVWKYITDWQN---- 97
Query: 339 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYA 398
+F YD + G+I K++L +S + YR D ++
Sbjct: 98 --VFRTYDRDNSGMIDKNELKQALSG-------FGYRLSD-----------------QFH 131
Query: 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 449
+ D G + F+DF++G +L R ++ IF YD + DG I
Sbjct: 132 DILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD------IFRRYDTDQDGWI 176
>pdb|1EG3|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex
With A Beta-Dystroglycan Peptide
pdb|1EG4|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex
With A Beta-Dystroglycan Peptide
Length = 261
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 303 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIF 342
+++ N D +TG + F G+ LC+ E+K R++F
Sbjct: 135 NWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLF 174
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIF 438
+++ N D +TG + F G+ LC+ E+K R++F
Sbjct: 135 NWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLF 174
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 305 VFNTLDHNKTGFLNFEDF---VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
VF+ LD +K+GF+ ++ +KG S R ++ + + D +GDG I ++ +
Sbjct: 10 VFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 69
Query: 362 VS 363
V+
Sbjct: 70 VA 71
Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 401 VFNTLDHNKTGFLNFEDF---VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
VF+ LD +K+GF+ ++ +KG S R ++ + + D +GDG I ++ +
Sbjct: 10 VFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 69
Query: 458 VS 459
V+
Sbjct: 70 VA 71
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 29.3 bits (64), Expect = 4.6, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 367
R +EE++ F ++D NGDGVI D+ I+ V E
Sbjct: 3 RQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGE 39
Score = 29.3 bits (64), Expect = 4.6, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 427 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463
R +EE++ F ++D NGDGVI D+ I+ V E
Sbjct: 3 RQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGE 39
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 42/171 (24%)
Query: 279 IRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKL 338
++Q G + F P S + + D +NF +F +
Sbjct: 47 LQQALSNGTWTPFNPVTVRS------IISMFDRENKAGVNFSEFTGVWKYITDWQN---- 96
Query: 339 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYA 398
+F YD + G+I K++L +S + YR D ++
Sbjct: 97 --VFRTYDRDNSGMIDKNELKQALSG-------FGYRLSD-----------------QFH 130
Query: 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 449
+ D G + F+DF++G +L R ++ IF YD + DG I
Sbjct: 131 DILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD------IFRRYDTDQDGWI 175
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 42/171 (24%)
Query: 279 IRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKL 338
++Q G + F P S + + D +NF +F +
Sbjct: 26 LQQALSNGTWTPFNPVTVRS------IISMFDRENKAGVNFSEFTGVWKYITDWQN---- 75
Query: 339 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYA 398
+F YD + G+I K++L +S + YR D ++
Sbjct: 76 --VFRTYDRDNSGMIDKNELKQALSG-------FGYRLSD-----------------QFH 109
Query: 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 449
+ D G + F+DF++G +L R ++ IF YD + DG I
Sbjct: 110 DILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD------IFRRYDTDQDGWI 154
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 29.3 bits (64), Expect = 4.8, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 334 EEEKLRWIFCLYDINGDGVI----------------SKDDLYNIVSSV-YELMGTYAYRA 376
+++++R F L+D +G G I K+++ +++ + + GT +
Sbjct: 6 QKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEE 65
Query: 377 FDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRW 436
F M A+ E ++ F D ++TG ++F++ + L +E+L+
Sbjct: 66 FLQMMTAKMGER----DSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 437 IFCLYDINGDGVISKDDLYNIV 458
+ D +GDG +++++ + I+
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIM 143
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 29.3 bits (64), Expect = 4.9, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 23/154 (14%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
F+ D N GFL++ + + L + ++ + YD G ++ DD Y +
Sbjct: 29 FSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIV---- 84
Query: 366 YELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 425
MG E + + F D + TG ++ ++ + L
Sbjct: 85 ---MG----------------EKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKEL 125
Query: 426 CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 459
+E+LR + +D++GDG I++++ I +
Sbjct: 126 GETLTDEELRAMIEEFDLDGDGEINENEFIAICT 159
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 21/143 (14%)
Query: 305 VFNTLDHNKTGFLNFEDFVKG-----------LSILCRGSEEEKLRWIFCLYDINGDGVI 353
+F LD+N G L+ ++ ++G +S L E ++ I D + +G I
Sbjct: 319 IFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYI 378
Query: 354 SKDDLYNIVSSVYELMG----TYAYRAFDSG----MVAQRVEYLFQVS--TQRYAHYVFN 403
+ + L+ A++ FDS + + + LF V+ H V
Sbjct: 379 EYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQ 438
Query: 404 TLDHNKTGFLNFEDFVKGLSILC 426
D N G ++FE+FV+ + +C
Sbjct: 439 ECDKNNDGEVDFEEFVEMMQKIC 461
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 29.3 bits (64), Expect = 5.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 305 VFNTLDHNKTGFLNFEDF---VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
VF+ LD +K+GF+ ++ +KG S R ++ + + D +GDG I ++ +
Sbjct: 46 VFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 105
Query: 362 VS 363
V+
Sbjct: 106 VA 107
Score = 29.3 bits (64), Expect = 5.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 401 VFNTLDHNKTGFLNFEDF---VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
VF+ LD +K+GF+ ++ +KG S R ++ + + D +GDG I ++ +
Sbjct: 46 VFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 105
Query: 458 VS 459
V+
Sbjct: 106 VA 107
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 42/171 (24%)
Query: 279 IRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKL 338
++Q G + F P S + + D +NF +F +
Sbjct: 25 LQQALSNGTWTPFNPVTVRS------IISMFDRENKAGVNFSEFTGVWKYITDWQN---- 74
Query: 339 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYA 398
+F YD + G+I K++L +S + YR D ++
Sbjct: 75 --VFRTYDRDNSGMIDKNELKQALSG-------FGYRLSD-----------------QFH 108
Query: 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 449
+ D G + F+DF++G +L R ++ IF YD + DG I
Sbjct: 109 DILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD------IFRRYDTDQDGWI 153
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 29.3 bits (64), Expect = 5.6, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 305 VFNTLDHNKTGFLNFEDF---VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
VF+ LD +K GF++ ++ +KG S R ++ + + D +GDG I ++ +
Sbjct: 46 VFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 105
Query: 362 VS 363
V+
Sbjct: 106 VA 107
Score = 29.3 bits (64), Expect = 5.6, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 401 VFNTLDHNKTGFLNFEDF---VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
VF+ LD +K GF++ ++ +KG S R ++ + + D +GDG I ++ +
Sbjct: 46 VFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 105
Query: 458 VS 459
V+
Sbjct: 106 VA 107
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 60/171 (35%), Gaps = 42/171 (24%)
Query: 279 IRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKL 338
++Q G + F P S + + D +NF +F +
Sbjct: 29 LQQALSNGTWTPFNPVTVRS------IISMFDRENKAGVNFSEFTGVWKYITDWQN---- 78
Query: 339 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYA 398
+F YD + G+I K++L +S YR D ++
Sbjct: 79 --VFRTYDRDNSGMIDKNELKQALSGA-------GYRLSD-----------------QFH 112
Query: 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 449
+ D G + F+DF++G +L R ++ IF YD + DG I
Sbjct: 113 DILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD------IFRRYDTDQDGWI 157
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 21/143 (14%)
Query: 305 VFNTLDHNKTGFLNFEDFVKG-----------LSILCRGSEEEKLRWIFCLYDINGDGVI 353
+F LD+N G L+ ++ ++G +S L E ++ I D + +G I
Sbjct: 45 IFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYI 104
Query: 354 SKDDLYNIVSSVYELMG----TYAYRAFDSG----MVAQRVEYLFQVS--TQRYAHYVFN 403
+ + L+ A++ FDS + + + LF V+ H V
Sbjct: 105 EYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQ 164
Query: 404 TLDHNKTGFLNFEDFVKGLSILC 426
D N G ++FE+FV+ + +C
Sbjct: 165 ECDKNNDGEVDFEEFVEMMQKIC 187
>pdb|3HPB|A Chain A, Crystal Structure Of Snx5-Px Domain In P212121 Space Group
Length = 161
Score = 28.9 bits (63), Expect = 7.1, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 135 EYPEF-IDREFRVKLWNMDELTEQEEYPEFIDHSELTEENIDSPRYRPQSI 184
+ PEF + R+ +W D LTE +Y I T+ + D PR + Q +
Sbjct: 40 QSPEFSVTRQHEDFVWLHDTLTETTDYAGLIIPPAPTKPDFDGPREKXQKL 90
>pdb|3HPC|X Chain X, Crystal Structure Of Snx5-Px Domain In P21 Space Group
Length = 161
Score = 28.9 bits (63), Expect = 7.6, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 135 EYPEF-IDREFRVKLWNMDELTEQEEYPEFIDHSELTEENIDSPRYRPQSI-EALCRATK 192
+ PEF + R+ +W D LTE +Y I T+ + D PR + Q + E TK
Sbjct: 40 QSPEFSVTRQHEDFVWLHDTLTETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTK 99
Query: 193 FSEAEIKK 200
A++K+
Sbjct: 100 EEFAKMKQ 107
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 28.5 bits (62), Expect = 8.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363
F+ D NKTG +++ + + L ++ ++ + YD G+G I DD +I++
Sbjct: 13 FDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMT 70
Score = 28.5 bits (62), Expect = 8.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 459
F+ D NKTG +++ + + L ++ ++ + YD G+G I DD +I++
Sbjct: 13 FDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMT 70
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 28.5 bits (62), Expect = 8.9, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 24/90 (26%)
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+G EE+L F ++D N DG I ++L I+ RA ++ + +E L
Sbjct: 5 KGKSEEELANCFRIFDKNADGFIDIEELGEIL------------RATGEHVIEEDIEDLM 52
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+ S D N G ++F++F+K
Sbjct: 53 KDS------------DKNNDGRIDFDEFLK 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,517,674
Number of Sequences: 62578
Number of extensions: 624825
Number of successful extensions: 2113
Number of sequences better than 100.0: 157
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 1577
Number of HSP's gapped (non-prelim): 482
length of query: 487
length of database: 14,973,337
effective HSP length: 103
effective length of query: 384
effective length of database: 8,527,803
effective search space: 3274676352
effective search space used: 3274676352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)