Query psy2870
Match_columns 487
No_of_seqs 403 out of 2982
Neff 6.9
Searched_HMMs 46136
Date Fri Aug 16 19:00:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2870.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2870hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0044|consensus 100.0 1.3E-27 2.9E-32 224.3 18.8 174 172-424 2-175 (193)
2 KOG0034|consensus 99.8 9.2E-19 2E-23 164.5 18.0 169 171-424 1-175 (187)
3 COG5126 FRQ1 Ca2+-binding prot 99.8 2.6E-18 5.6E-23 156.6 16.4 146 187-424 8-156 (160)
4 KOG0038|consensus 99.7 9.5E-17 2.1E-21 141.4 15.0 176 171-424 1-177 (189)
5 KOG0027|consensus 99.7 3.4E-16 7.4E-21 142.9 15.3 144 298-460 6-149 (151)
6 COG5126 FRQ1 Ca2+-binding prot 99.7 7E-16 1.5E-20 140.7 15.7 139 298-460 18-156 (160)
7 PTZ00183 centrin; Provisional 99.7 1.3E-15 2.9E-20 138.3 16.4 140 298-460 15-154 (158)
8 PTZ00184 calmodulin; Provision 99.7 4E-15 8.7E-20 133.3 16.6 138 299-459 10-147 (149)
9 KOG0027|consensus 99.6 1.3E-14 2.8E-19 132.5 15.8 121 277-423 23-148 (151)
10 PTZ00183 centrin; Provisional 99.6 1.5E-13 3.2E-18 124.9 17.3 122 277-424 32-154 (158)
11 KOG0028|consensus 99.6 7.1E-14 1.5E-18 125.4 14.5 140 298-460 31-170 (172)
12 PTZ00184 calmodulin; Provision 99.6 1.7E-13 3.7E-18 122.8 17.0 121 277-423 26-147 (149)
13 KOG0037|consensus 99.5 2.7E-13 5.9E-18 127.7 17.8 163 251-459 55-219 (221)
14 KOG0044|consensus 99.4 5.8E-12 1.2E-16 118.8 16.9 160 277-464 7-179 (193)
15 KOG0028|consensus 99.3 1.2E-10 2.6E-15 104.8 15.2 123 276-424 47-170 (172)
16 KOG0036|consensus 99.3 7.1E-11 1.5E-15 120.2 15.0 136 298-462 12-148 (463)
17 KOG0037|consensus 99.3 1.4E-10 3.1E-15 109.5 15.3 136 299-464 56-192 (221)
18 KOG0034|consensus 99.3 9E-11 2E-15 110.6 14.0 137 299-462 32-177 (187)
19 KOG4223|consensus 99.2 4.4E-10 9.6E-15 111.7 13.5 161 275-460 90-269 (325)
20 KOG0030|consensus 99.1 1.6E-09 3.4E-14 95.5 13.7 141 297-459 8-150 (152)
21 KOG0031|consensus 99.1 3.3E-09 7.2E-14 95.0 15.4 139 297-463 29-167 (171)
22 PLN02964 phosphatidylserine de 99.0 2E-09 4.3E-14 118.1 12.6 122 176-364 118-243 (644)
23 KOG4223|consensus 99.0 5E-09 1.1E-13 104.3 13.7 186 279-480 58-245 (325)
24 KOG0036|consensus 98.9 2E-08 4.3E-13 102.7 15.1 149 277-460 29-183 (463)
25 PF13499 EF-hand_7: EF-hand do 98.9 5.7E-09 1.2E-13 81.3 7.6 66 337-422 1-66 (66)
26 KOG0031|consensus 98.9 8.5E-08 1.8E-12 86.1 15.7 117 277-423 47-164 (171)
27 PLN02964 phosphatidylserine de 98.9 1.4E-08 3E-13 111.6 12.7 129 305-460 112-243 (644)
28 KOG2643|consensus 98.9 1.5E-08 3.2E-13 104.2 11.0 192 265-461 202-454 (489)
29 KOG0030|consensus 98.8 4.2E-08 9.2E-13 86.6 10.4 110 333-466 8-122 (152)
30 PF13499 EF-hand_7: EF-hand do 98.8 1.8E-08 3.9E-13 78.5 7.0 60 399-458 3-66 (66)
31 KOG0377|consensus 98.7 3.1E-07 6.8E-12 94.4 14.8 150 299-462 463-617 (631)
32 KOG0751|consensus 98.7 6.3E-07 1.4E-11 93.3 16.6 141 298-465 72-212 (694)
33 KOG2562|consensus 98.6 2E-07 4.3E-12 96.7 11.5 209 205-470 145-389 (493)
34 cd05022 S-100A13 S-100A13: S-1 98.6 1.6E-07 3.4E-12 78.3 7.7 65 400-464 12-79 (89)
35 KOG2643|consensus 98.6 2.7E-07 5.8E-12 95.1 10.1 138 309-462 208-348 (489)
36 KOG4347|consensus 98.5 4.9E-07 1.1E-11 97.2 9.8 126 182-358 487-612 (671)
37 cd05027 S-100B S-100B: S-100B 98.5 9.1E-07 2E-11 73.6 8.7 65 399-463 11-82 (88)
38 cd05022 S-100A13 S-100A13: S-1 98.4 7.8E-07 1.7E-11 74.1 7.5 66 300-365 8-76 (89)
39 cd00052 EH Eps15 homology doma 98.4 1.2E-06 2.6E-11 67.8 7.9 63 400-464 3-65 (67)
40 PF13833 EF-hand_8: EF-hand do 98.4 7.9E-07 1.7E-11 66.5 6.5 52 409-460 1-53 (54)
41 cd05026 S-100Z S-100Z: S-100Z 98.4 1.3E-06 2.9E-11 73.3 8.4 64 400-463 14-84 (93)
42 KOG4251|consensus 98.4 2.5E-06 5.5E-11 81.9 10.2 171 272-457 111-342 (362)
43 smart00027 EH Eps15 homology d 98.3 3E-06 6.6E-11 71.3 9.3 66 399-466 13-78 (96)
44 cd05029 S-100A6 S-100A6: S-100 98.3 2.6E-06 5.7E-11 70.8 8.7 63 401-463 15-82 (88)
45 cd05031 S-100A10_like S-100A10 98.3 2.5E-06 5.5E-11 71.6 8.7 65 401-465 13-84 (94)
46 cd00051 EFh EF-hand, calcium b 98.3 2.5E-06 5.5E-11 63.5 7.6 59 400-458 4-62 (63)
47 cd00051 EFh EF-hand, calcium b 98.3 2.6E-06 5.5E-11 63.5 7.5 61 302-362 2-62 (63)
48 cd05025 S-100A1 S-100A1: S-100 98.3 3.7E-06 7.9E-11 70.2 9.0 67 398-464 11-84 (92)
49 cd05027 S-100B S-100B: S-100B 98.3 3.2E-06 7E-11 70.3 8.2 66 300-365 8-80 (88)
50 cd00052 EH Eps15 homology doma 98.3 3.2E-06 7E-11 65.4 7.6 61 303-365 2-62 (67)
51 cd00213 S-100 S-100: S-100 dom 98.2 4.7E-06 1E-10 68.8 8.3 66 398-463 10-82 (88)
52 cd00252 SPARC_EC SPARC_EC; ext 98.2 2.7E-06 5.7E-11 74.4 7.0 62 333-422 45-106 (116)
53 KOG4251|consensus 98.2 3.8E-06 8.2E-11 80.7 8.2 197 262-462 56-311 (362)
54 smart00027 EH Eps15 homology d 98.2 6.5E-06 1.4E-10 69.3 8.8 70 298-369 8-77 (96)
55 cd05023 S-100A11 S-100A11: S-1 98.2 5.7E-06 1.2E-10 68.9 8.0 63 401-463 14-83 (89)
56 cd05025 S-100A1 S-100A1: S-100 98.2 6.4E-06 1.4E-10 68.8 8.1 67 299-365 8-81 (92)
57 cd05026 S-100Z S-100Z: S-100Z 98.2 6.4E-06 1.4E-10 69.1 8.1 66 300-365 10-82 (93)
58 PF13833 EF-hand_8: EF-hand do 98.2 4E-06 8.7E-11 62.7 6.1 50 314-363 2-52 (54)
59 cd05031 S-100A10_like S-100A10 98.2 6.7E-06 1.4E-10 69.0 8.0 67 299-365 7-80 (94)
60 KOG0038|consensus 98.2 7.9E-06 1.7E-10 72.8 8.6 106 340-468 75-185 (189)
61 cd00252 SPARC_EC SPARC_EC; ext 98.1 9.6E-06 2.1E-10 70.9 8.1 56 400-459 52-107 (116)
62 cd00213 S-100 S-100: S-100 dom 98.0 1.8E-05 3.9E-10 65.3 7.7 67 299-365 7-80 (88)
63 KOG2562|consensus 98.0 4.3E-05 9.2E-10 79.7 11.9 125 276-420 292-420 (493)
64 cd05029 S-100A6 S-100A6: S-100 98.0 2.4E-05 5.2E-10 65.1 7.6 65 301-365 11-80 (88)
65 PF00036 EF-hand_1: EF hand; 97.9 1.1E-05 2.5E-10 52.8 3.7 27 434-460 2-28 (29)
66 cd05023 S-100A11 S-100A11: S-1 97.9 5.9E-05 1.3E-09 62.8 8.3 66 300-365 9-81 (89)
67 cd05030 calgranulins Calgranul 97.9 7E-05 1.5E-09 62.2 8.3 63 401-463 13-82 (88)
68 KOG0377|consensus 97.7 0.00041 8.8E-09 72.0 12.9 67 299-365 546-616 (631)
69 PF00036 EF-hand_1: EF hand; 97.7 4.4E-05 9.6E-10 50.0 3.8 25 303-327 3-27 (29)
70 KOG0041|consensus 97.7 0.00014 3E-09 68.4 7.8 66 398-463 101-166 (244)
71 cd05030 calgranulins Calgranul 97.7 0.00017 3.7E-09 59.9 7.7 70 337-425 9-80 (88)
72 KOG4666|consensus 97.6 5.1E-05 1.1E-09 75.8 4.3 117 277-424 242-359 (412)
73 PF14658 EF-hand_9: EF-hand do 97.6 0.00019 4.1E-09 56.1 6.5 61 304-364 2-64 (66)
74 KOG0041|consensus 97.6 0.00028 6.1E-09 66.3 8.1 69 297-365 96-164 (244)
75 KOG0751|consensus 97.5 0.0019 4.1E-08 68.0 13.3 172 192-425 29-208 (694)
76 PF14658 EF-hand_9: EF-hand do 97.4 0.0005 1.1E-08 53.8 6.7 60 401-460 3-64 (66)
77 KOG4666|consensus 97.4 0.00017 3.8E-09 72.1 4.8 127 311-465 238-364 (412)
78 PF13405 EF-hand_6: EF-hand do 97.4 0.00021 4.5E-09 47.3 3.6 29 434-462 2-31 (31)
79 PRK12309 transaldolase/EF-hand 97.4 0.00082 1.8E-08 70.6 9.6 56 395-463 333-388 (391)
80 PRK12309 transaldolase/EF-hand 97.4 0.00044 9.5E-09 72.7 7.4 57 298-367 332-388 (391)
81 cd05024 S-100A10 S-100A10: A s 97.3 0.0014 2.9E-08 54.8 7.8 69 337-425 9-77 (91)
82 cd05024 S-100A10 S-100A10: A s 97.2 0.003 6.4E-08 52.8 9.3 62 401-463 13-79 (91)
83 PF13202 EF-hand_5: EF hand; P 97.1 0.00063 1.4E-08 42.9 3.2 23 435-457 2-24 (25)
84 KOG4065|consensus 97.0 0.0026 5.6E-08 54.8 7.4 76 334-421 65-142 (144)
85 KOG0040|consensus 97.0 0.0019 4E-08 75.3 8.5 101 337-455 2254-2356(2399)
86 PF13405 EF-hand_6: EF-hand do 97.0 0.00084 1.8E-08 44.4 3.2 27 337-363 1-27 (31)
87 KOG0040|consensus 96.9 0.005 1.1E-07 71.9 10.9 99 301-422 2254-2359(2399)
88 PF13202 EF-hand_5: EF hand; P 96.9 0.00099 2.2E-08 42.0 3.0 22 339-360 2-23 (25)
89 PF12763 EF-hand_4: Cytoskelet 96.9 0.0055 1.2E-07 52.6 8.3 69 297-368 7-75 (104)
90 PF14788 EF-hand_10: EF hand; 96.8 0.0039 8.4E-08 46.2 5.9 48 317-364 2-49 (51)
91 PF14788 EF-hand_10: EF hand; 96.8 0.0041 8.9E-08 46.1 5.9 50 412-461 1-50 (51)
92 PF12763 EF-hand_4: Cytoskelet 96.7 0.0087 1.9E-07 51.3 8.1 62 401-465 15-76 (104)
93 PF10591 SPARC_Ca_bdg: Secrete 96.5 0.0053 1.2E-07 53.4 5.5 59 396-456 54-112 (113)
94 PF10591 SPARC_Ca_bdg: Secrete 96.4 0.0013 2.9E-08 57.2 1.4 65 331-421 49-113 (113)
95 KOG0033|consensus 96.3 0.002 4.3E-08 63.1 1.9 56 89-144 220-275 (355)
96 KOG1029|consensus 95.9 0.091 2E-06 58.3 12.5 64 336-425 195-258 (1118)
97 KOG0169|consensus 95.9 0.077 1.7E-06 59.1 12.0 136 297-460 133-274 (746)
98 smart00054 EFh EF-hand, calciu 95.1 0.025 5.4E-07 34.7 3.0 26 434-459 2-27 (29)
99 KOG1029|consensus 95.0 0.5 1.1E-05 52.8 14.3 67 396-464 195-261 (1118)
100 KOG0615|consensus 94.4 0.01 2.2E-07 62.0 -0.4 61 84-144 385-445 (475)
101 smart00054 EFh EF-hand, calciu 94.3 0.067 1.5E-06 32.6 3.6 25 303-327 3-27 (29)
102 KOG3866|consensus 93.6 0.39 8.4E-06 48.4 9.0 112 339-464 247-358 (442)
103 KOG4065|consensus 93.0 0.3 6.6E-06 42.3 6.3 57 401-457 72-142 (144)
104 KOG0169|consensus 92.8 1.1 2.3E-05 50.4 11.8 127 308-462 100-234 (746)
105 KOG0032|consensus 92.5 0.052 1.1E-06 57.2 1.3 51 92-142 249-299 (382)
106 KOG0599|consensus 92.5 0.027 5.8E-07 56.2 -0.9 51 90-140 237-287 (411)
107 KOG0046|consensus 92.3 0.36 7.7E-06 51.9 7.0 67 337-425 20-86 (627)
108 PF05042 Caleosin: Caleosin re 92.0 1.3 2.8E-05 41.3 9.6 104 301-422 8-164 (174)
109 PF09279 EF-hand_like: Phospho 91.9 0.41 9E-06 38.7 5.6 61 400-461 4-70 (83)
110 KOG0046|consensus 91.6 0.63 1.4E-05 50.0 7.9 63 401-464 24-89 (627)
111 KOG0998|consensus 91.4 0.19 4.1E-06 58.2 4.2 60 400-461 287-346 (847)
112 KOG4578|consensus 90.7 0.12 2.6E-06 52.3 1.5 67 335-424 332-398 (421)
113 PF05042 Caleosin: Caleosin re 89.6 2.4 5.2E-05 39.6 8.9 61 398-459 98-165 (174)
114 KOG3555|consensus 88.4 0.63 1.4E-05 47.6 4.6 107 279-424 201-310 (434)
115 PF09279 EF-hand_like: Phospho 88.4 1.3 2.8E-05 35.8 5.7 62 302-364 2-69 (83)
116 KOG4347|consensus 87.6 0.72 1.6E-05 50.8 4.8 59 395-454 554-612 (671)
117 KOG0604|consensus 87.0 0.18 4E-06 51.0 -0.1 72 69-144 259-330 (400)
118 KOG3555|consensus 86.7 0.64 1.4E-05 47.5 3.5 58 401-462 255-312 (434)
119 KOG4578|consensus 85.7 0.62 1.3E-05 47.3 2.8 66 299-364 332-398 (421)
120 PF14513 DAG_kinase_N: Diacylg 85.2 1.2 2.7E-05 40.1 4.3 80 174-313 3-82 (138)
121 KOG1955|consensus 81.0 3.1 6.8E-05 44.5 5.9 69 394-464 229-297 (737)
122 KOG4286|consensus 79.3 14 0.0003 41.8 10.3 111 300-424 470-580 (966)
123 PLN02952 phosphoinositide phos 79.1 14 0.00029 41.4 10.3 52 313-365 13-66 (599)
124 PF09069 EF-hand_3: EF-hand; 78.1 14 0.0003 30.9 7.7 71 335-424 2-75 (90)
125 KOG1955|consensus 77.4 4.5 9.8E-05 43.4 5.7 66 299-366 230-295 (737)
126 PLN02952 phosphoinositide phos 73.2 24 0.00053 39.4 10.3 87 276-363 14-109 (599)
127 KOG1707|consensus 72.2 9.5 0.00021 42.0 6.7 32 433-464 316-347 (625)
128 KOG0039|consensus 69.2 10 0.00022 43.0 6.4 88 314-424 2-89 (646)
129 KOG0610|consensus 68.8 2.3 4.9E-05 45.0 1.1 55 84-140 338-396 (459)
130 PF05517 p25-alpha: p25-alpha 64.0 30 0.00064 31.7 7.4 66 402-467 8-76 (154)
131 PF09068 EF-hand_2: EF hand; 63.6 86 0.0019 27.8 10.0 104 316-425 14-126 (127)
132 PF09069 EF-hand_3: EF-hand; 63.5 33 0.00071 28.7 6.8 62 398-462 5-77 (90)
133 KOG0607|consensus 61.8 2.9 6.4E-05 42.9 0.4 49 92-140 317-365 (463)
134 KOG3866|consensus 59.6 15 0.00032 37.4 4.8 59 401-459 249-323 (442)
135 KOG1265|consensus 58.7 1.3E+02 0.0027 35.3 12.2 103 256-363 181-298 (1189)
136 KOG0042|consensus 58.0 19 0.0004 39.7 5.5 65 398-462 595-659 (680)
137 KOG1707|consensus 57.1 39 0.00086 37.4 7.8 154 299-459 194-376 (625)
138 KOG0035|consensus 56.9 48 0.001 38.6 8.8 102 335-456 746-848 (890)
139 PF09068 EF-hand_2: EF hand; 54.8 63 0.0014 28.6 7.6 27 183-209 25-51 (127)
140 KOG2243|consensus 53.1 21 0.00046 42.9 5.2 59 401-460 4062-4120(5019)
141 KOG2243|consensus 51.6 21 0.00045 43.0 4.8 58 341-423 4062-4119(5019)
142 KOG0035|consensus 50.4 61 0.0013 37.7 8.3 68 299-366 746-818 (890)
143 PF12174 RST: RCD1-SRO-TAF4 (R 47.6 29 0.00062 27.6 3.8 48 315-365 7-54 (70)
144 KOG1265|consensus 46.2 1.4E+02 0.003 35.0 10.0 63 398-460 223-299 (1189)
145 PF05517 p25-alpha: p25-alpha 44.0 86 0.0019 28.6 7.0 60 345-425 11-70 (154)
146 PF12174 RST: RCD1-SRO-TAF4 (R 39.2 42 0.00091 26.7 3.5 51 411-464 7-58 (70)
147 PF14513 DAG_kinase_N: Diacylg 36.5 1E+02 0.0022 27.8 6.0 37 350-409 46-82 (138)
148 KOG0998|consensus 35.3 15 0.00033 42.8 0.7 65 300-366 283-347 (847)
149 PF08414 NADPH_Ox: Respiratory 34.6 65 0.0014 27.4 4.1 26 197-222 28-53 (100)
150 PRK09430 djlA Dna-J like membr 34.4 4.8E+02 0.01 26.0 13.6 88 275-370 68-162 (267)
151 PLN03225 Serine/threonine-prot 34.2 24 0.00052 39.2 2.0 40 105-144 419-458 (566)
152 PF11116 DUF2624: Protein of u 34.0 1.8E+02 0.0038 24.1 6.5 55 412-466 14-68 (85)
153 cd07313 terB_like_2 tellurium 33.7 1.8E+02 0.0039 24.0 6.9 50 314-363 13-64 (104)
154 cd07848 STKc_CDKL5 Catalytic d 33.0 15 0.00033 35.8 0.2 34 106-139 254-287 (287)
155 PF00404 Dockerin_1: Dockerin 31.7 60 0.0013 19.6 2.5 15 442-456 1-15 (21)
156 KOG0042|consensus 31.4 85 0.0018 34.8 5.4 65 301-365 594-658 (680)
157 cd07869 STKc_PFTAIRE1 Catalyti 29.2 23 0.00049 35.1 0.7 41 109-151 261-301 (303)
158 PF08414 NADPH_Ox: Respiratory 29.0 2E+02 0.0042 24.6 6.1 58 401-463 35-95 (100)
159 PF08726 EFhand_Ca_insen: Ca2+ 28.5 49 0.0011 26.2 2.3 30 430-460 4-33 (69)
160 PF11569 Homez: Homeodomain le 28.3 71 0.0015 24.3 3.0 27 178-204 22-48 (56)
161 cd07871 STKc_PCTAIRE3 Catalyti 27.6 25 0.00055 34.5 0.7 33 107-139 256-288 (288)
162 cd07868 STKc_CDK8 Catalytic do 26.9 30 0.00065 34.4 1.1 32 108-139 286-317 (317)
163 PF02761 Cbl_N2: CBL proto-onc 26.7 1.8E+02 0.004 24.0 5.4 49 315-363 21-69 (85)
164 KOG4004|consensus 26.2 31 0.00067 33.1 0.9 51 272-326 198-248 (259)
165 KOG0603|consensus 26.2 23 0.00051 39.3 0.2 49 85-139 518-566 (612)
166 KOG4004|consensus 25.8 29 0.00063 33.2 0.7 55 402-458 193-248 (259)
167 KOG4286|consensus 25.0 7.1E+02 0.015 28.9 11.1 118 335-464 419-544 (966)
168 PF11116 DUF2624: Protein of u 24.1 4.2E+02 0.009 22.0 7.6 50 316-365 14-63 (85)
169 PLN02228 Phosphoinositide phos 24.0 2.3E+02 0.005 31.6 7.3 59 401-461 29-93 (567)
170 PF02761 Cbl_N2: CBL proto-onc 23.7 2.8E+02 0.0061 23.0 5.9 50 411-460 21-70 (85)
171 PHA03390 pk1 serine/threonine- 23.5 45 0.00097 32.4 1.6 35 106-140 231-266 (267)
172 PF05920 Homeobox_KN: Homeobox 21.2 1.4E+02 0.003 20.9 3.3 26 179-204 11-36 (40)
173 PLN03224 probable serine/threo 21.0 37 0.0008 37.3 0.5 45 94-140 457-504 (507)
174 cd07863 STKc_CDK4 Catalytic do 20.7 45 0.00098 32.3 1.0 33 107-139 256-288 (288)
175 cd07835 STKc_CDK1_like Catalyt 20.7 38 0.00082 32.8 0.4 34 106-139 250-283 (283)
176 PTZ00284 protein kinase; Provi 20.6 32 0.00068 36.8 -0.2 33 109-141 411-443 (467)
177 cd08216 PK_STRAD Pseudokinase 20.1 77 0.0017 31.2 2.6 33 108-140 267-299 (314)
178 PLN02228 Phosphoinositide phos 20.1 3.4E+02 0.0073 30.4 7.6 66 297-364 21-92 (567)
No 1
>KOG0044|consensus
Probab=99.95 E-value=1.3e-27 Score=224.28 Aligned_cols=174 Identities=41% Similarity=0.819 Sum_probs=161.6
Q ss_pred ccCCCCCCChHHHHHHHHhCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHhhhcCCCCcccccccccccCCCCCCccc
Q psy2870 172 ENIDSPRYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAECPTGTIR 251 (487)
Q Consensus 172 ~~~~~~~l~~~~l~~l~~~t~fs~~ei~~L~~~F~~l~~~G~i~~~~F~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~i~ 251 (487)
+.+...+++++.+++|.+.|+|+++||+++|+.|+..||+|.++.++|+.+|+.++|.|
T Consensus 2 ~~~~~~~~~~~~~e~l~~~t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~g--------------------- 60 (193)
T KOG0044|consen 2 GKKSNSKLQPESLEQLVQQTKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDG--------------------- 60 (193)
T ss_pred CccccccCCcHHHHHHHHhcCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCC---------------------
Confidence 33435689999999999999999999999999999999999999999999999999987
Q ss_pred chhhhhhhhhccCCCCcccccCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcC
Q psy2870 252 QDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR 331 (487)
Q Consensus 252 ~d~~~~~~~~~~~~~~~~l~~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~ 331 (487)
++..+++.+|+.+|.|+||.|+|.||+.+|+.+.+
T Consensus 61 ---------------------------------------------d~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~r 95 (193)
T KOG0044|consen 61 ---------------------------------------------DASKYAELVFRTFDKNKDGTIDFLEFICALSLTSR 95 (193)
T ss_pred ---------------------------------------------CHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcC
Confidence 67889999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCC
Q psy2870 332 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTG 411 (487)
Q Consensus 332 ~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG 411 (487)
+..+++++|+|++||.||+|+|+++|+..++..++.+++....+ ......++.+.. +|+.+|.|+||
T Consensus 96 Gt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~-~~~~~~~~~v~~------------if~k~D~n~Dg 162 (193)
T KOG0044|consen 96 GTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALP-EDEETPEERVDK------------IFSKMDKNKDG 162 (193)
T ss_pred CcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCC-cccccHHHHHHH------------HHHHcCCCCCC
Confidence 99999999999999999999999999999999999999886555 556678888888 99999999999
Q ss_pred cccHHHHHHHHHH
Q psy2870 412 FLNFEDFVKGLSI 424 (487)
Q Consensus 412 ~Is~eEF~~~l~~ 424 (487)
.||++||..++..
T Consensus 163 ~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 163 KLTLEEFIEGCKA 175 (193)
T ss_pred cccHHHHHHHhhh
Confidence 9999999999764
No 2
>KOG0034|consensus
Probab=99.81 E-value=9.2e-19 Score=164.48 Aligned_cols=169 Identities=28% Similarity=0.469 Sum_probs=140.0
Q ss_pred cccCCCCCCChHHHHHHHHhCC----CCHHHHHHHHHHHhhcCCCCCccHHHHHHHHhhhcCCCCcccccccccccCCCC
Q psy2870 171 EENIDSPRYRPQSIEALCRATK----FSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAECP 246 (487)
Q Consensus 171 ~~~~~~~~l~~~~l~~l~~~t~----fs~~ei~~L~~~F~~l~~~G~i~~~~F~~~~~~~~p~~~~~~~~~g~~~~~~~~ 246 (487)
||+..+..++.+.++.++..++ ||..||..||.+|++++..+
T Consensus 1 Mg~~~s~~~~~~~~~~~~~~~~~~~~fs~~EI~~L~~rF~kl~~~~---------------------------------- 46 (187)
T KOG0034|consen 1 MGNLSSTLLSDEDLEELQMYTGDPTQFSANEIERLYERFKKLDRNN---------------------------------- 46 (187)
T ss_pred CCcccccccchhhhHHHHhccCCCcccCHHHHHHHHHHHHHhcccc----------------------------------
Confidence 6777777777889999999999 99999999999999986541
Q ss_pred CCcccchhhhhhhhhccCCCCcccccCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCc-ccHHHHHHH
Q psy2870 247 TGTIRQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGF-LNFEDFVKG 325 (487)
Q Consensus 247 ~~~i~~d~~~~~~~~~~~~~~~~l~~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~-IdfeEF~~~ 325 (487)
.+|.|+.++|..+... ..+....++++.+|.+++|. |+|++|+.+
T Consensus 47 ----------------------------~~g~lt~eef~~i~~~------~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ 92 (187)
T KOG0034|consen 47 ----------------------------GDGYLTKEEFLSIPEL------ALNPLADRIIDRFDTDGNGDPVDFEEFVRL 92 (187)
T ss_pred ----------------------------ccCccCHHHHHHHHHH------hcCcHHHHHHHHHhccCCCCccCHHHHHHH
Confidence 1266667777766633 35678899999999999999 999999999
Q ss_pred HHHhcCCChH-HHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHh
Q psy2870 326 LSILCRGSEE-EKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNT 404 (487)
Q Consensus 326 L~~l~~~~~e-ekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~ 404 (487)
++.+...... ++++.+|++||.+++|+|+++|+..++..+. +..... ..+.....++. +|..
T Consensus 93 ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~---~~~~~~--~~e~~~~i~d~------------t~~e 155 (187)
T KOG0034|consen 93 LSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMV---GENDDM--SDEQLEDIVDK------------TFEE 155 (187)
T ss_pred HhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH---ccCCcc--hHHHHHHHHHH------------HHHH
Confidence 9999866544 5999999999999999999999999998863 321111 35677777777 9999
Q ss_pred hCCCCCCcccHHHHHHHHHH
Q psy2870 405 LDHNKTGFLNFEDFVKGLSI 424 (487)
Q Consensus 405 ~D~D~DG~Is~eEF~~~l~~ 424 (487)
+|.|+||.|+++||+.++.+
T Consensus 156 ~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 156 ADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred hCCCCCCcCcHHHHHHHHHc
Confidence 99999999999999999875
No 3
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.79 E-value=2.6e-18 Score=156.64 Aligned_cols=146 Identities=25% Similarity=0.386 Sum_probs=123.7
Q ss_pred HHHhCCCCHHHHHHHHHHHhhcCC--CCCccHHHHHHHHhhhcCCCCcccccccccccCCCCCCcccchhhhhhhhhccC
Q psy2870 187 LCRATKFSEAEIKKIYRNFKAECP--TGTIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAECPTGTIRQDTFKGIYAKFFP 264 (487)
Q Consensus 187 l~~~t~fs~~ei~~L~~~F~~l~~--~G~i~~~~F~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~i~~d~~~~~~~~~~~ 264 (487)
+...+.|++.||++|+++|..+|+ +|.|++.+|..+++
T Consensus 8 ~~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr---------------------------------------- 47 (160)
T COG5126 8 LLTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILR---------------------------------------- 47 (160)
T ss_pred hhhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHH----------------------------------------
Confidence 777889999999999999999987 45555555555544
Q ss_pred CCCcccccCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-CCChHHHHHHHHH
Q psy2870 265 CGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFC 343 (487)
Q Consensus 265 ~~~~~l~~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~-~~~~eekl~~iF~ 343 (487)
.++.. .+..++.++|..+|. ++|.|+|.+|+.+|.... ....+++++++|+
T Consensus 48 -------------------------~lg~~--~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~ 99 (160)
T COG5126 48 -------------------------SLGFN--PSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFK 99 (160)
T ss_pred -------------------------HcCCC--CcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 33322 678899999999999 999999999999999877 5678999999999
Q ss_pred hcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q psy2870 344 LYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423 (487)
Q Consensus 344 ~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~ 423 (487)
.||.|++|+|+..|++.++..+ ......+.++. +++.+|.|++|.|++++|++++.
T Consensus 100 ~fD~d~dG~Is~~eL~~vl~~l------------ge~~~deev~~------------ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 100 LFDKDHDGYISIGELRRVLKSL------------GERLSDEEVEK------------LLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred HhCCCCCceecHHHHHHHHHhh------------cccCCHHHHHH------------HHHhcCCCCCceEeHHHHHHHHh
Confidence 9999999999999999999864 44455667777 99999999999999999999875
Q ss_pred H
Q psy2870 424 I 424 (487)
Q Consensus 424 ~ 424 (487)
.
T Consensus 156 ~ 156 (160)
T COG5126 156 D 156 (160)
T ss_pred c
Confidence 3
No 4
>KOG0038|consensus
Probab=99.73 E-value=9.5e-17 Score=141.37 Aligned_cols=176 Identities=19% Similarity=0.331 Sum_probs=143.2
Q ss_pred cccCCCCCCChHHHHHHHHhCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHhhhcCCCCcccccccccccCCCCCCcc
Q psy2870 171 EENIDSPRYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAECPTGTI 250 (487)
Q Consensus 171 ~~~~~~~~l~~~~l~~l~~~t~fs~~ei~~L~~~F~~l~~~G~i~~~~F~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~i 250 (487)
|||+.. .++.++|.++|.+|.|++++|-+||.||+.+.|... |.
T Consensus 1 MGNK~~-vFT~eqLd~YQDCTFFtrKdIlrl~~Rf~~L~P~lV--------------P~--------------------- 44 (189)
T KOG0038|consen 1 MGNKQT-VFTEEQLDEYQDCTFFTRKDILRLHKRFYELAPHLV--------------PT--------------------- 44 (189)
T ss_pred CCCccc-eeeHHHHhhhcccccccHHHHHHHHHHHHHhCcccc--------------cc---------------------
Confidence 788776 899999999999999999999999999999988642 11
Q ss_pred cchhhhhhhhhccCCCCcccccCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhc
Q psy2870 251 RQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330 (487)
Q Consensus 251 ~~d~~~~~~~~~~~~~~~~l~~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~ 330 (487)
.+..+.+|.-.+..+...+.-.. ..+.+-+++...|..||.|.++|++|+.+++.++
T Consensus 45 -----------------~~~~~~~~~v~vp~e~i~kMPEL------kenpfk~ri~e~FSeDG~GnlsfddFlDmfSV~s 101 (189)
T KOG0038|consen 45 -----------------DMTGNRPPIVKVPFELIEKMPEL------KENPFKRRICEVFSEDGRGNLSFDDFLDMFSVFS 101 (189)
T ss_pred -----------------cccCCCCCceeecHHHHhhChhh------hcChHHHHHHHHhccCCCCcccHHHHHHHHHHHH
Confidence 11223445555665554432221 3456778899999999999999999999999887
Q ss_pred C-CChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCC
Q psy2870 331 R-GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNK 409 (487)
Q Consensus 331 ~-~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~ 409 (487)
. .+.+-++..+|++||-|+|++|...++...+..+. ..+++.+.+...+++ +....|.|+
T Consensus 102 E~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lT-------r~eLs~eEv~~i~ek------------vieEAD~Dg 162 (189)
T KOG0038|consen 102 EMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLT-------RDELSDEEVELICEK------------VIEEADLDG 162 (189)
T ss_pred hhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHh-------hccCCHHHHHHHHHH------------HHHHhcCCC
Confidence 4 46678899999999999999999999999988762 245778888888888 999999999
Q ss_pred CCcccHHHHHHHHHH
Q psy2870 410 TGFLNFEDFVKGLSI 424 (487)
Q Consensus 410 DG~Is~eEF~~~l~~ 424 (487)
||+|++.||..++.+
T Consensus 163 Dgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 163 DGKLSFAEFEHVILR 177 (189)
T ss_pred CCcccHHHHHHHHHh
Confidence 999999999998765
No 5
>KOG0027|consensus
Probab=99.70 E-value=3.4e-16 Score=142.92 Aligned_cols=144 Identities=21% Similarity=0.359 Sum_probs=126.1
Q ss_pred cHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccC
Q psy2870 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAF 377 (487)
Q Consensus 298 ~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~ 377 (487)
....+..+|..||++++|.|+..|+..+++.++...++.++..++..+|.|++|.|+++||..++........
T Consensus 6 ~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~------- 78 (151)
T KOG0027|consen 6 QILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKT------- 78 (151)
T ss_pred HHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccc-------
Confidence 4567889999999999999999999999999999999999999999999999999999999999987521100
Q ss_pred ChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHH
Q psy2870 378 DSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457 (487)
Q Consensus 378 ~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~ 457 (487)
......+.+.. +|+.+|.|++|.|+..|+..+|..++...+.+++..+++.+|.|+||.|+++||..+
T Consensus 79 ~~~~~~~el~e------------aF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~ 146 (151)
T KOG0027|consen 79 DEEASSEELKE------------AFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKM 146 (151)
T ss_pred cccccHHHHHH------------HHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHH
Confidence 00012334444 999999999999999999999999999999999999999999999999999999998
Q ss_pred HHH
Q psy2870 458 VSS 460 (487)
Q Consensus 458 l~~ 460 (487)
+..
T Consensus 147 m~~ 149 (151)
T KOG0027|consen 147 MSG 149 (151)
T ss_pred Hhc
Confidence 864
No 6
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.69 E-value=7e-16 Score=140.74 Aligned_cols=139 Identities=17% Similarity=0.340 Sum_probs=124.7
Q ss_pred cHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccC
Q psy2870 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAF 377 (487)
Q Consensus 298 ~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~ 377 (487)
..+.++..|..+|.|++|.|+..++..+++.++...++..+..+|..+|. |.|.|++.+|..+|....
T Consensus 18 qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~----------- 85 (160)
T COG5126 18 QIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKL----------- 85 (160)
T ss_pred HHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHh-----------
Confidence 34678889999999999999999999999999999999999999999999 999999999999997641
Q ss_pred ChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHH
Q psy2870 378 DSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457 (487)
Q Consensus 378 ~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~ 457 (487)
......+.+.. +|+.+|.|+||+|+..|++..++.++...+++++..+++.+|.|+||.|++++|.+.
T Consensus 86 ~~~~~~Eel~~------------aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~ 153 (160)
T COG5126 86 KRGDKEEELRE------------AFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKL 153 (160)
T ss_pred ccCCcHHHHHH------------HHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHH
Confidence 11223444555 999999999999999999999999999999999999999999999999999999987
Q ss_pred HHH
Q psy2870 458 VSS 460 (487)
Q Consensus 458 l~~ 460 (487)
+..
T Consensus 154 ~~~ 156 (160)
T COG5126 154 IKD 156 (160)
T ss_pred Hhc
Confidence 764
No 7
>PTZ00183 centrin; Provisional
Probab=99.68 E-value=1.3e-15 Score=138.33 Aligned_cols=140 Identities=20% Similarity=0.350 Sum_probs=121.3
Q ss_pred cHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccC
Q psy2870 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAF 377 (487)
Q Consensus 298 ~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~ 377 (487)
....+..+|..+|.+++|.|++.||..++..++.......+..+|..+|.+++|.|++.||..++.... .
T Consensus 15 ~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~---~------- 84 (158)
T PTZ00183 15 QKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKL---G------- 84 (158)
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHh---c-------
Confidence 345678899999999999999999999999887667788899999999999999999999998876531 0
Q ss_pred ChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHH
Q psy2870 378 DSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457 (487)
Q Consensus 378 ~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~ 457 (487)
....+..++. +|+.+|.+++|.|+.+||..++..++..++..++..+|..+|.|++|.|+++||..+
T Consensus 85 -~~~~~~~l~~------------~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~ 151 (158)
T PTZ00183 85 -ERDPREEILK------------AFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRI 151 (158)
T ss_pred -CCCcHHHHHH------------HHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 1112334455 999999999999999999999998888899999999999999999999999999998
Q ss_pred HHH
Q psy2870 458 VSS 460 (487)
Q Consensus 458 l~~ 460 (487)
+..
T Consensus 152 ~~~ 154 (158)
T PTZ00183 152 MKK 154 (158)
T ss_pred Hhc
Confidence 875
No 8
>PTZ00184 calmodulin; Provisional
Probab=99.66 E-value=4e-15 Score=133.34 Aligned_cols=138 Identities=15% Similarity=0.297 Sum_probs=119.1
Q ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCC
Q psy2870 299 YRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFD 378 (487)
Q Consensus 299 ~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~ 378 (487)
...+...|..+|.+++|.|+++||..++..+......+.+..+|+.+|.+++|.|+++||..++.... .
T Consensus 10 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~-----------~ 78 (149)
T PTZ00184 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKM-----------K 78 (149)
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhc-----------c
Confidence 34567899999999999999999999998887777788999999999999999999999998886531 1
Q ss_pred hhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHH
Q psy2870 379 SGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 458 (487)
Q Consensus 379 ~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l 458 (487)
.......+.. +|+.+|.+++|.|+.+||..++..++...+.+.+..+|..+|.+++|.|+++||..++
T Consensus 79 ~~~~~~~~~~------------~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 79 DTDSEEEIKE------------AFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146 (149)
T ss_pred CCcHHHHHHH------------HHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHH
Confidence 1112233444 9999999999999999999999988778889999999999999999999999999887
Q ss_pred H
Q psy2870 459 S 459 (487)
Q Consensus 459 ~ 459 (487)
.
T Consensus 147 ~ 147 (149)
T PTZ00184 147 M 147 (149)
T ss_pred h
Confidence 5
No 9
>KOG0027|consensus
Probab=99.62 E-value=1.3e-14 Score=132.46 Aligned_cols=121 Identities=24% Similarity=0.447 Sum_probs=103.6
Q ss_pred CccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCC-----hHHHHHHHHHhcccCCCc
Q psy2870 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGS-----EEEKLRWIFCLYDINGDG 351 (487)
Q Consensus 277 G~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~-----~eekl~~iF~~~D~DgdG 351 (487)
|.|+..+|..++..++.. .....+..+++.+|.+++|.|++.||+.++....... ..+.++.+|+.||.|++|
T Consensus 23 G~i~~~el~~~lr~lg~~--~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G 100 (151)
T KOG0027|consen 23 GKISVEELGAVLRSLGQN--PTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDG 100 (151)
T ss_pred CcccHHHHHHHHHHcCCC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCC
Confidence 888888888888888876 6788999999999999999999999999998776432 345999999999999999
Q ss_pred cccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q psy2870 352 VISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423 (487)
Q Consensus 352 ~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~ 423 (487)
+||..||+.+|..+ |. ....+.+.. +++.+|.|+||.|+|+||+.+|.
T Consensus 101 ~Is~~el~~~l~~l----g~--------~~~~~e~~~------------mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 101 FISASELKKVLTSL----GE--------KLTDEECKE------------MIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred cCcHHHHHHHHHHh----CC--------cCCHHHHHH------------HHHhcCCCCCCeEeHHHHHHHHh
Confidence 99999999999886 22 122455555 99999999999999999999875
No 10
>PTZ00183 centrin; Provisional
Probab=99.56 E-value=1.5e-13 Score=124.87 Aligned_cols=122 Identities=19% Similarity=0.293 Sum_probs=98.2
Q ss_pred CccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-CCChHHHHHHHHHhcccCCCccccH
Q psy2870 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISK 355 (487)
Q Consensus 277 G~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~-~~~~eekl~~iF~~~D~DgdG~Is~ 355 (487)
|.|+..+|..++..++.. .....+..+|..+|.+++|.|++.||+.++.... .....+.++.+|+.+|.+++|.|+.
T Consensus 32 G~i~~~e~~~~l~~~g~~--~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~ 109 (158)
T PTZ00183 32 GTIDPKELKVAMRSLGFE--PKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISL 109 (158)
T ss_pred CcccHHHHHHHHHHhCCC--CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcH
Confidence 677777777777766532 3567899999999999999999999999887643 4456678999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q psy2870 356 DDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424 (487)
Q Consensus 356 eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~ 424 (487)
+||..++..+ |. .+ ....+.. +|..+|.+++|.|+++||+.++..
T Consensus 110 ~e~~~~l~~~----~~----~l----~~~~~~~------------~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 110 KNLKRVAKEL----GE----TI----TDEELQE------------MIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHHHh----CC----CC----CHHHHHH------------HHHHhCCCCCCcCcHHHHHHHHhc
Confidence 9999998764 21 12 2344455 999999999999999999998764
No 11
>KOG0028|consensus
Probab=99.56 E-value=7.1e-14 Score=125.44 Aligned_cols=140 Identities=18% Similarity=0.302 Sum_probs=125.9
Q ss_pred cHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccC
Q psy2870 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAF 377 (487)
Q Consensus 298 ~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~ 377 (487)
....++..|..||.+++|+|+++|+..++..++.....+++..+..-+|.+|.|.|++++|...+...+ +
T Consensus 31 q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~---~------- 100 (172)
T KOG0028|consen 31 QKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKL---G------- 100 (172)
T ss_pred HHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHH---h-------
Confidence 346788899999999999999999999999999988999999999999999999999999999987642 1
Q ss_pred ChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHH
Q psy2870 378 DSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457 (487)
Q Consensus 378 ~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~ 457 (487)
..-..+.+.. +|+.+|.|++|.|++.+|+..+..++..++++++.++...+|.|+||-|+.+||..+
T Consensus 101 -e~dt~eEi~~------------afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~i 167 (172)
T KOG0028|consen 101 -ERDTKEEIKK------------AFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRI 167 (172)
T ss_pred -ccCcHHHHHH------------HHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHH
Confidence 1114455566 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q psy2870 458 VSS 460 (487)
Q Consensus 458 l~~ 460 (487)
++.
T Consensus 168 mk~ 170 (172)
T KOG0028|consen 168 MKK 170 (172)
T ss_pred Hhc
Confidence 875
No 12
>PTZ00184 calmodulin; Provisional
Probab=99.56 E-value=1.7e-13 Score=122.76 Aligned_cols=121 Identities=21% Similarity=0.416 Sum_probs=97.1
Q ss_pred CccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-CCChHHHHHHHHHhcccCCCccccH
Q psy2870 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISK 355 (487)
Q Consensus 277 G~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~-~~~~eekl~~iF~~~D~DgdG~Is~ 355 (487)
|.|+.++|..++..++.. .....+..+|..+|.+++|.|++++|+.++.... .......++.+|+.+|.+++|.|+.
T Consensus 26 G~i~~~e~~~~l~~~~~~--~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~ 103 (149)
T PTZ00184 26 GTITTKELGTVMRSLGQN--PTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISA 103 (149)
T ss_pred CcCCHHHHHHHHHHhCCC--CCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeH
Confidence 677777777777666543 3467889999999999999999999999987653 3456678999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q psy2870 356 DDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423 (487)
Q Consensus 356 eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~ 423 (487)
+||..++..+ +. .+ ....+.. +|..+|.+++|.|+++||+.++.
T Consensus 104 ~e~~~~l~~~----~~----~~----~~~~~~~------------~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 104 AELRHVMTNL----GE----KL----TDEEVDE------------MIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHHH----CC----CC----CHHHHHH------------HHHhcCCCCCCcCcHHHHHHHHh
Confidence 9999998764 21 12 2334444 89999999999999999998864
No 13
>KOG0037|consensus
Probab=99.55 E-value=2.7e-13 Score=127.74 Aligned_cols=163 Identities=19% Similarity=0.317 Sum_probs=134.1
Q ss_pred cchhhhhhhhhccCCCCcccccCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhc
Q psy2870 251 RQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330 (487)
Q Consensus 251 ~~d~~~~~~~~~~~~~~~~l~~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~ 330 (487)
+..++.+++... +...+|.|+.+|+++.+..... .....+.++.|..+||.+.+|+|++.||..++..+.
T Consensus 55 ~~~~~~~~f~~v---------D~d~sg~i~~~eLq~aLsn~~~-~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~ 124 (221)
T KOG0037|consen 55 TFPQLAGWFQSV---------DRDRSGRILAKELQQALSNGTW-SPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN 124 (221)
T ss_pred ccHHHHHHHHhh---------CccccccccHHHHHHHhhcCCC-CCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH
Confidence 445666666553 4556799999999999985433 235789999999999999999999999999998775
Q ss_pred CCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCC
Q psy2870 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKT 410 (487)
Q Consensus 331 ~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~D 410 (487)
.++.+|+.||.|++|.|+..||..++..+ |.. +++ +..+. +++++|.-++
T Consensus 125 ------~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~----Gy~----Lsp----q~~~~------------lv~kyd~~~~ 174 (221)
T KOG0037|consen 125 ------QWRNVFRTYDRDRSGTIDSSELRQALTQL----GYR----LSP----QFYNL------------LVRKYDRFGG 174 (221)
T ss_pred ------HHHHHHHhcccCCCCcccHHHHHHHHHHc----CcC----CCH----HHHHH------------HHHHhccccC
Confidence 89999999999999999999999999875 443 222 33344 8899998889
Q ss_pred CcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcc--cHHHHHHHHH
Q psy2870 411 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI--SKDDLYNIVS 459 (487)
Q Consensus 411 G~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~I--s~eEF~~~l~ 459 (487)
|.|.|++|++++..+ ..+.++|+..|.+.+|.| ++++|..+..
T Consensus 175 g~i~FD~FI~ccv~L------~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t~ 219 (221)
T KOG0037|consen 175 GRIDFDDFIQCCVVL------QRLTEAFRRRDTAQQGSITISYDDFLQMTM 219 (221)
T ss_pred CceeHHHHHHHHHHH------HHHHHHHHHhccccceeEEEeHHHHHHHhh
Confidence 999999999999887 778899999999999976 7788877643
No 14
>KOG0044|consensus
Probab=99.43 E-value=5.8e-12 Score=118.83 Aligned_cols=160 Identities=17% Similarity=0.315 Sum_probs=126.7
Q ss_pred CccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCC-CCcccHHHHHHHHHHhcC-CChHHHHHHHHHhcccCCCcccc
Q psy2870 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNK-TGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGDGVIS 354 (487)
Q Consensus 277 G~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~-dG~IdfeEF~~~L~~l~~-~~~eekl~~iF~~~D~DgdG~Is 354 (487)
..++.+.+.++..... .+...++..++.|-.+. +|.++-++|..++..+-. +....-...+|+.+|.|++|.|+
T Consensus 7 ~~~~~~~~e~l~~~t~----f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~ 82 (193)
T KOG0044|consen 7 SKLQPESLEQLVQQTK----FSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTID 82 (193)
T ss_pred ccCCcHHHHHHHHhcC----CCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcC
Confidence 3444555555543322 45677778888776665 899999999999988875 67788889999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhcc-------
Q psy2870 355 KDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR------- 427 (487)
Q Consensus 355 ~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~------- 427 (487)
+.||..++..+ ....+.+.++- +|+.+|.|++|.|+++|+..++..+..
T Consensus 83 F~Efi~als~~------------~rGt~eekl~w------------~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~ 138 (193)
T KOG0044|consen 83 FLEFICALSLT------------SRGTLEEKLKW------------AFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKAL 138 (193)
T ss_pred HHHHHHHHHHH------------cCCcHHHHhhh------------hheeecCCCCceEcHHHHHHHHHHHHHHcccccC
Confidence 99998888764 33445666666 899999999999999999998877532
Q ss_pred ----CChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhh
Q psy2870 428 ----GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 464 (487)
Q Consensus 428 ----~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~ 464 (487)
...++.+..+|+.+|.|+||.||++||......-...
T Consensus 139 ~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~i 179 (193)
T KOG0044|consen 139 PEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPSI 179 (193)
T ss_pred CcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHHH
Confidence 2245678999999999999999999999988765443
No 15
>KOG0028|consensus
Probab=99.28 E-value=1.2e-10 Score=104.79 Aligned_cols=123 Identities=19% Similarity=0.317 Sum_probs=103.9
Q ss_pred CCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHH-hcCCChHHHHHHHHHhcccCCCcccc
Q psy2870 276 TGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSI-LCRGSEEEKLRWIFCLYDINGDGVIS 354 (487)
Q Consensus 276 sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~-l~~~~~eekl~~iF~~~D~DgdG~Is 354 (487)
+|.|+.+||+..+..++.. .....+..+..-+|+++.|.|+|++|+..+.. ++...+.++++.+|+.+|.|++|.|+
T Consensus 47 ~g~iD~~EL~vAmralGFE--~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis 124 (172)
T KOG0028|consen 47 AGKIDVEELKVAMRALGFE--PKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKIS 124 (172)
T ss_pred CCcccHHHHHHHHHHcCCC--cchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcC
Confidence 3888899998888888875 56778889999999999999999999998654 44556899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q psy2870 355 KDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424 (487)
Q Consensus 355 ~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~ 424 (487)
..+|+.++..+ .+....+.+.. ++..+|.|+||.|+-+||...|+.
T Consensus 125 ~~~lkrvakeL------------genltD~El~e------------MIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 125 QRNLKRVAKEL------------GENLTDEELME------------MIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHHHHh------------CccccHHHHHH------------HHHHhcccccccccHHHHHHHHhc
Confidence 99999999875 22333444455 899999999999999999998764
No 16
>KOG0036|consensus
Probab=99.27 E-value=7.1e-11 Score=120.21 Aligned_cols=136 Identities=18% Similarity=0.260 Sum_probs=122.5
Q ss_pred cHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCC-ChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhccccccc
Q psy2870 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG-SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRA 376 (487)
Q Consensus 298 ~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~-~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~ 376 (487)
.+..++.+|+.+|.+++|.|+..+...++..+... ...+..+.+|...|.|.||.++++||...+...
T Consensus 12 r~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~----------- 80 (463)
T KOG0036|consen 12 RDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK----------- 80 (463)
T ss_pred HHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh-----------
Confidence 45678899999999999999999999999988876 667788899999999999999999999998652
Q ss_pred CChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHH
Q psy2870 377 FDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456 (487)
Q Consensus 377 ~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~ 456 (487)
+..+.. +|..+|.+.||.|+..|..+.++.++..++.+++..+|+.+|+++++.|+++||+.
T Consensus 81 ------E~~l~~------------~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd 142 (463)
T KOG0036|consen 81 ------ELELYR------------IFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRD 142 (463)
T ss_pred ------HHHHHH------------HHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHh
Confidence 233444 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh
Q psy2870 457 IVSSVY 462 (487)
Q Consensus 457 ~l~~lg 462 (487)
++.-..
T Consensus 143 ~~ll~p 148 (463)
T KOG0036|consen 143 HLLLYP 148 (463)
T ss_pred hhhcCC
Confidence 887655
No 17
>KOG0037|consensus
Probab=99.26 E-value=1.4e-10 Score=109.54 Aligned_cols=136 Identities=18% Similarity=0.268 Sum_probs=121.5
Q ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-CCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccC
Q psy2870 299 YRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAF 377 (487)
Q Consensus 299 ~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~-~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~ 377 (487)
...+-..|...|+|+.|.|+-+|+..+|.... ..-..+.++.+..+||.+++|.|.++||..++..+.
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~----------- 124 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN----------- 124 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH-----------
Confidence 45677899999999999999999999998443 456788999999999999999999999999988751
Q ss_pred ChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHH
Q psy2870 378 DSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457 (487)
Q Consensus 378 ~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~ 457 (487)
-|+.+|+.+|.|+.|.|+..|+.+++..++-.++++-+..+++.+|.-++|.|.+++|+++
T Consensus 125 -------------------~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~c 185 (221)
T KOG0037|consen 125 -------------------QWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQC 185 (221)
T ss_pred -------------------HHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHH
Confidence 1444999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHhhhh
Q psy2870 458 VSSVYEL 464 (487)
Q Consensus 458 l~~lg~~ 464 (487)
+..+...
T Consensus 186 cv~L~~l 192 (221)
T KOG0037|consen 186 CVVLQRL 192 (221)
T ss_pred HHHHHHH
Confidence 8876553
No 18
>KOG0034|consensus
Probab=99.26 E-value=9e-11 Score=110.56 Aligned_cols=137 Identities=20% Similarity=0.354 Sum_probs=108.1
Q ss_pred HHHHHHHHHHhCCC-CCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCcc-ccHHHHHHHHHHHHHHhccccccc
Q psy2870 299 YRYAHYVFNTLDHN-KTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGV-ISKDDLYNIVSSVYELMGTYAYRA 376 (487)
Q Consensus 299 ~~~l~~lF~~~D~d-~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~-Is~eEf~~~l~~l~~~~g~~~~~~ 376 (487)
...+...|..+|.+ ++|.|+.+||..+... ... .-...+++.+|.+++|. |++++|...+....
T Consensus 32 I~~L~~rF~kl~~~~~~g~lt~eef~~i~~~-~~N---p~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~---------- 97 (187)
T KOG0034|consen 32 IERLYERFKKLDRNNGDGYLTKEEFLSIPEL-ALN---PLADRIIDRFDTDGNGDPVDFEEFVRLLSVFS---------- 97 (187)
T ss_pred HHHHHHHHHHhccccccCccCHHHHHHHHHH-hcC---cHHHHHHHHHhccCCCCccCHHHHHHHHhhhc----------
Confidence 34567788999999 9999999999988832 222 24567888899999998 99999999997651
Q ss_pred CChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhcc-CCh--H----HHHHHHHHHhccCCCCcc
Q psy2870 377 FDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSE--E----EKLRWIFCLYDINGDGVI 449 (487)
Q Consensus 377 ~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~-~~~--~----eei~~iF~~~D~DgDG~I 449 (487)
.....+..++- +|+.+|.+++|.|+.+|+.+++..+.. ..+ . ..+..+|..+|.|+||+|
T Consensus 98 -~~~~~~~Kl~f------------aF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~I 164 (187)
T KOG0034|consen 98 -PKASKREKLRF------------AFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKI 164 (187)
T ss_pred -CCccHHHHHHH------------HHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcC
Confidence 11122345555 999999999999999999999998755 233 2 336778999999999999
Q ss_pred cHHHHHHHHHHhh
Q psy2870 450 SKDDLYNIVSSVY 462 (487)
Q Consensus 450 s~eEF~~~l~~lg 462 (487)
+++||..++....
T Consensus 165 sfeEf~~~v~~~P 177 (187)
T KOG0034|consen 165 SFEEFCKVVEKQP 177 (187)
T ss_pred cHHHHHHHHHcCc
Confidence 9999999988753
No 19
>KOG4223|consensus
Probab=99.15 E-value=4.4e-10 Score=111.72 Aligned_cols=161 Identities=18% Similarity=0.240 Sum_probs=117.2
Q ss_pred CCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcC--------C------ChHHHHHH
Q psy2870 275 PTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR--------G------SEEEKLRW 340 (487)
Q Consensus 275 ~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~--------~------~~eekl~~ 340 (487)
.+|.|+..|++.++...... .....+.+-|..+|.|.+|.|+|+|+......... . ..-.+-+.
T Consensus 90 ~Dgfv~~~El~~wi~~s~k~--~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~~~km~~rDe~ 167 (325)
T KOG4223|consen 90 SDGFVTESELKAWIMQSQKK--YVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNEEYKKMIARDEE 167 (325)
T ss_pred CCCceeHHHHHHHHHHHHHH--HHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchhcHHHHHHHHHHHH
Confidence 35888888888887765422 23456667888999999999999999988764310 0 11123456
Q ss_pred HHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy2870 341 IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420 (487)
Q Consensus 341 iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~ 420 (487)
-|+..|.|+||.+|.+||..++.-- -.+.+..=.|.. .+..+|+|+||+|+++||+.
T Consensus 168 rFk~AD~d~dg~lt~EEF~aFLHPE-----------e~p~M~~iVi~E------------tl~d~Dkn~DG~I~~eEfig 224 (325)
T KOG4223|consen 168 RFKAADQDGDGSLTLEEFTAFLHPE-----------EHPHMKDIVIAE------------TLEDIDKNGDGKISLEEFIG 224 (325)
T ss_pred HHhhcccCCCCcccHHHHHhccChh-----------hcchHHHHHHHH------------HHhhcccCCCCceeHHHHHh
Confidence 7999999999999999999887531 122233333344 88899999999999999999
Q ss_pred HHHHhccCCh-----HHHHHHHHHHhccCCCCcccHHHHHHHHHH
Q psy2870 421 GLSILCRGSE-----EEKLRWIFCLYDINGDGVISKDDLYNIVSS 460 (487)
Q Consensus 421 ~l~~l~~~~~-----~eei~~iF~~~D~DgDG~Is~eEF~~~l~~ 460 (487)
-|........ ..+-..++...|+|+||+++.+|++.++.-
T Consensus 225 d~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P 269 (325)
T KOG4223|consen 225 DLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILP 269 (325)
T ss_pred HHhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCC
Confidence 8876433111 123457888899999999999999987763
No 20
>KOG0030|consensus
Probab=99.11 E-value=1.6e-09 Score=95.50 Aligned_cols=141 Identities=13% Similarity=0.123 Sum_probs=119.8
Q ss_pred CcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccC--CCccccHHHHHHHHHHHHHHhccccc
Q psy2870 297 SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDIN--GDGVISKDDLYNIVSSVYELMGTYAY 374 (487)
Q Consensus 297 ~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~D--gdG~Is~eEf~~~l~~l~~~~g~~~~ 374 (487)
+....++.+|..||..+||.|++.+.-.+|+.++..+++..+......++.+ +-..|++++|.-++..+-. +.
T Consensus 8 d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vak----nk- 82 (152)
T KOG0030|consen 8 DQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAK----NK- 82 (152)
T ss_pred chHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHh----cc-
Confidence 4567889999999999999999999999999999999999999999999887 5678999999999987632 11
Q ss_pred ccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHH
Q psy2870 375 RAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454 (487)
Q Consensus 375 ~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF 454 (487)
.....++.++ -++.||++++|.|...|+++.+..++..++++++..+..-. .|.+|.|.|+.|
T Consensus 83 ---~q~t~edfve-------------gLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~f 145 (152)
T KOG0030|consen 83 ---DQGTYEDFVE-------------GLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAF 145 (152)
T ss_pred ---ccCcHHHHHH-------------HHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHH
Confidence 1112223222 78999999999999999999999999999999999998876 578899999999
Q ss_pred HHHHH
Q psy2870 455 YNIVS 459 (487)
Q Consensus 455 ~~~l~ 459 (487)
.+.+.
T Consensus 146 Vk~i~ 150 (152)
T KOG0030|consen 146 VKHIM 150 (152)
T ss_pred HHHHh
Confidence 87664
No 21
>KOG0031|consensus
Probab=99.10 E-value=3.3e-09 Score=94.98 Aligned_cols=139 Identities=19% Similarity=0.251 Sum_probs=120.8
Q ss_pred CcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhccccccc
Q psy2870 297 SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRA 376 (487)
Q Consensus 297 ~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~ 376 (487)
...+.+++.|..+|.|+||.|+.+++...+..+++..+++.+..++. ...|-|++--|..++...+. |
T Consensus 29 ~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~----Ea~gPINft~FLTmfGekL~--g------ 96 (171)
T KOG0031|consen 29 SQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMK----EAPGPINFTVFLTMFGEKLN--G------ 96 (171)
T ss_pred HHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHH----hCCCCeeHHHHHHHHHHHhc--C------
Confidence 35678889999999999999999999999999999999999999997 57899999988888765421 1
Q ss_pred CChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHH
Q psy2870 377 FDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456 (487)
Q Consensus 377 ~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~ 456 (487)
-..++.+.. +|+.||.++.|.|..+.++.+|...+...+++++..+|+.+-.|..|.|++.+|..
T Consensus 97 ---tdpe~~I~~------------AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~ 161 (171)
T KOG0031|consen 97 ---TDPEEVILN------------AFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTY 161 (171)
T ss_pred ---CCHHHHHHH------------HHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHH
Confidence 112445555 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh
Q psy2870 457 IVSSVYE 463 (487)
Q Consensus 457 ~l~~lg~ 463 (487)
++. .|+
T Consensus 162 ~it-hG~ 167 (171)
T KOG0031|consen 162 IIT-HGE 167 (171)
T ss_pred HHH-ccc
Confidence 988 343
No 22
>PLN02964 phosphatidylserine decarboxylase
Probab=99.01 E-value=2e-09 Score=118.12 Aligned_cols=122 Identities=19% Similarity=0.337 Sum_probs=100.4
Q ss_pred CCCCChHHHHHHHHh--CCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHhhhcCCCCcccccccccccCCCCCCcccch
Q psy2870 176 SPRYRPQSIEALCRA--TKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAECPTGTIRQD 253 (487)
Q Consensus 176 ~~~l~~~~l~~l~~~--t~fs~~ei~~L~~~F~~l~~~G~i~~~~F~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~i~~d 253 (487)
+.+++++.+..+++. +.|+.+|+..+++.|..++++|.
T Consensus 118 ~~~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgd---------------------------------------- 157 (644)
T PLN02964 118 TNRLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSS---------------------------------------- 157 (644)
T ss_pred cCCCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCC----------------------------------------
Confidence 457899999999999 99999999999999999987752
Q ss_pred hhhhhhhhccCCCCcccccCCCCCccCHHHHHHHHHhhCC-CCC-CcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcC
Q psy2870 254 TFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFP-CGT-SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR 331 (487)
Q Consensus 254 ~~~~~~~~~~~~~~~~l~~~~~sG~Is~eEF~~il~~l~~-~~~-~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~ 331 (487)
|.+ +..++..++. ... ....+++++|+.+|.|++|.|+++||+.++..+..
T Consensus 158 -----------------------G~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~ 210 (644)
T PLN02964 158 -----------------------NKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN 210 (644)
T ss_pred -----------------------CcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc
Confidence 222 3334444431 101 12235899999999999999999999999998877
Q ss_pred CChHHHHHHHHHhcccCCCccccHHHHHHHHHH
Q psy2870 332 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364 (487)
Q Consensus 332 ~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~ 364 (487)
...+++++.+|+.+|.|++|+|+.+||..++..
T Consensus 211 ~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 211 LVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 788899999999999999999999999999877
No 23
>KOG4223|consensus
Probab=99.00 E-value=5e-09 Score=104.30 Aligned_cols=186 Identities=16% Similarity=0.145 Sum_probs=126.7
Q ss_pred cCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHH
Q psy2870 279 IRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358 (487)
Q Consensus 279 Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf 358 (487)
+.-.++..-+.++.+. .+...+..++..+|.+++|.|+-.|+..-+..............-+..+|.|.||.|+++|.
T Consensus 58 ~~d~e~~~~fd~l~~e--e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey 135 (325)
T KOG4223|consen 58 LGDDEFADEFDQLTPE--ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEY 135 (325)
T ss_pred ccchhhhhhhhhhCcc--hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHh
Confidence 3435666666666654 57788999999999999999999999888877666666777888899999999999999999
Q ss_pred HHHHHHHHHHhcccccccCC-hhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhc-cCChHHHHHH
Q psy2870 359 YNIVSSVYELMGTYAYRAFD-SGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRW 436 (487)
Q Consensus 359 ~~~l~~l~~~~g~~~~~~~~-~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~-~~~~~eei~~ 436 (487)
...+..... ......... ...-+..+.+ ..+.|+..|.|+||.++.+||..++..-- ..+..-.|.+
T Consensus 136 ~~~~~~~~~--~~~~~~d~e~~~~~~km~~r---------De~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~E 204 (325)
T KOG4223|consen 136 LPQTYGRVD--LPDEFPDEEDNEEYKKMIAR---------DEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAE 204 (325)
T ss_pred hhhhhhccc--CccccccchhcHHHHHHHHH---------HHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHH
Confidence 877654211 000000000 0111111111 34489999999999999999999975421 1233445777
Q ss_pred HHHHhccCCCCcccHHHHHHHHHHhhhhhccccccchhhhhhhh
Q psy2870 437 IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQ 480 (487)
Q Consensus 437 iF~~~D~DgDG~Is~eEF~~~l~~lg~~l~~~~~~~~~~~~~~~ 480 (487)
...-+|+||||+|+++||+.=+- ..-+....+++.....++
T Consensus 205 tl~d~Dkn~DG~I~~eEfigd~~---~~~~~~~epeWv~~Ere~ 245 (325)
T KOG4223|consen 205 TLEDIDKNGDGKISLEEFIGDLY---SHEGNEEEPEWVLTEREQ 245 (325)
T ss_pred HHhhcccCCCCceeHHHHHhHHh---hccCCCCCcccccccHHH
Confidence 88999999999999999864433 333333344444444443
No 24
>KOG0036|consensus
Probab=98.93 E-value=2e-08 Score=102.66 Aligned_cols=149 Identities=22% Similarity=0.418 Sum_probs=112.4
Q ss_pred CccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHH
Q psy2870 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 356 (487)
Q Consensus 277 G~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~e 356 (487)
|.++..++.+.+..+... ......+..+|..+|.|.+|.+||.||...+. ..+.++..+|+..|.++||.|+..
T Consensus 29 g~~d~~~l~k~~~~l~~~-~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E~~l~~~F~~iD~~hdG~i~~~ 102 (463)
T KOG0036|consen 29 GQVDLDQLEKGLEKLDHP-KPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----NKELELYRIFQSIDLEHDGKIDPN 102 (463)
T ss_pred CceeHHHHHHHHHhcCCC-CCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----HhHHHHHHHHhhhccccCCccCHH
Confidence 556666666666555543 34667889999999999999999999999987 467788999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHH
Q psy2870 357 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRW 436 (487)
Q Consensus 357 Ef~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~ 436 (487)
|+...+..+ |. .++ .+.+.+ +|+.+|+++++.|+++|+...+... +...+..
T Consensus 103 Ei~~~l~~~----gi----~l~----de~~~k------------~~e~~d~~g~~~I~~~e~rd~~ll~----p~s~i~d 154 (463)
T KOG0036|consen 103 EIWRYLKDL----GI----QLS----DEKAAK------------FFEHMDKDGKATIDLEEWRDHLLLY----PESDLED 154 (463)
T ss_pred HHHHHHHHh----CC----ccC----HHHHHH------------HHHHhccCCCeeeccHHHHhhhhcC----ChhHHHH
Confidence 999999876 22 122 344444 9999999999999999999987643 2444554
Q ss_pred H------HHHhccCCCCcccHHHHHHHHHH
Q psy2870 437 I------FCLYDINGDGVISKDDLYNIVSS 460 (487)
Q Consensus 437 i------F~~~D~DgDG~Is~eEF~~~l~~ 460 (487)
+ +..+|...+..|. ++|....+.
T Consensus 155 i~~~W~h~~~idigE~~~iP-dg~s~~e~~ 183 (463)
T KOG0036|consen 155 IYDFWRHVLLIDIGEDAVLP-DGDSKLEND 183 (463)
T ss_pred HHHhhhhheEEEccccccCC-cchHHHHhc
Confidence 4 2345777777776 555544443
No 25
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.89 E-value=5.7e-09 Score=81.33 Aligned_cols=66 Identities=24% Similarity=0.538 Sum_probs=54.3
Q ss_pred HHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHH
Q psy2870 337 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFE 416 (487)
Q Consensus 337 kl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~e 416 (487)
+++.+|+.+|.|++|+|+.+||..++..+ +. ......+.+.+.. +|+.+|.|+||.|+++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~----~~----~~~~~~~~~~~~~------------~~~~~D~d~dG~i~~~ 60 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHL----GR----DMSDEESDEMIDQ------------IFREFDTDGDGRISFD 60 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT----TS----HSTHHHHHHHHHH------------HHHHHTTTSSSSEEHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHh----cc----cccHHHHHHHHHH------------HHHHhCCCCcCCCcHH
Confidence 47899999999999999999999999875 21 1224455566666 9999999999999999
Q ss_pred HHHHHH
Q psy2870 417 DFVKGL 422 (487)
Q Consensus 417 EF~~~l 422 (487)
||+.+|
T Consensus 61 Ef~~~~ 66 (66)
T PF13499_consen 61 EFLNFM 66 (66)
T ss_dssp HHHHHH
T ss_pred HHhccC
Confidence 999875
No 26
>KOG0031|consensus
Probab=98.89 E-value=8.5e-08 Score=86.06 Aligned_cols=117 Identities=19% Similarity=0.319 Sum_probs=89.6
Q ss_pred CccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-CCChHHHHHHHHHhcccCCCccccH
Q psy2870 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISK 355 (487)
Q Consensus 277 G~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~-~~~~eekl~~iF~~~D~DgdG~Is~ 355 (487)
|.|+.+.++..|..++.. .++.++..+++. ..|.|+|.-|+.++.... ...+++.+..+|+.||.+++|.|..
T Consensus 47 G~IdkeDL~d~~aSlGk~--~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtdpe~~I~~AF~~FD~~~~G~I~~ 120 (171)
T KOG0031|consen 47 GFIDKEDLRDMLASLGKI--ASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTDPEEVILNAFKTFDDEGSGKIDE 120 (171)
T ss_pred CcccHHHHHHHHHHcCCC--CCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCCHHHHHHHHHHhcCccCCCccCH
Confidence 445555555555555543 567778777764 689999999999886544 4577889999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q psy2870 356 DDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423 (487)
Q Consensus 356 eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~ 423 (487)
+.|+.+|... |. ....+.|+. +|+.+=.|..|.++|.+|+.++.
T Consensus 121 d~lre~Ltt~----gD--------r~~~eEV~~------------m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 121 DYLRELLTTM----GD--------RFTDEEVDE------------MYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHHHh----cc--------cCCHHHHHH------------HHHhCCcccCCceeHHHHHHHHH
Confidence 9999998763 22 234455666 99999888999999999999886
No 27
>PLN02964 phosphatidylserine decarboxylase
Probab=98.88 E-value=1.4e-08 Score=111.64 Aligned_cols=129 Identities=19% Similarity=0.213 Sum_probs=92.5
Q ss_pred HHHHhCCCCCCcccHHHHHHHHHH--hc-CCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhh
Q psy2870 305 VFNTLDHNKTGFLNFEDFVKGLSI--LC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGM 381 (487)
Q Consensus 305 lF~~~D~d~dG~IdfeEF~~~L~~--l~-~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~ 381 (487)
-|+.+|++ .+++++....... .. .....++++.+|..+|.|++|.| +..++..+ |.. ..+. .
T Consensus 112 ~~~~~~~~---~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrsl----G~~---~pte-~ 176 (644)
T PLN02964 112 RISVFETN---RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSC----SIE---DPVE-T 176 (644)
T ss_pred EEEEEecC---CCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHh----CCC---CCCH-H
Confidence 45566654 3555555443322 00 11234678889999999999997 55555543 310 0111 1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHH
Q psy2870 382 VAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460 (487)
Q Consensus 382 ~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~ 460 (487)
....++. +|+.+|.|++|.|+++||+.+|..++...+++++..+|+.+|.|++|+|+.+||..++..
T Consensus 177 e~~fi~~------------mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 177 ERSFARR------------ILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHHHH------------HHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 1112344 999999999999999999999998877788889999999999999999999999999998
No 28
>KOG2643|consensus
Probab=98.85 E-value=1.5e-08 Score=104.18 Aligned_cols=192 Identities=14% Similarity=0.195 Sum_probs=129.2
Q ss_pred CCCcccccCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCC-----------
Q psy2870 265 CGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGS----------- 333 (487)
Q Consensus 265 ~~~~~l~~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~----------- 333 (487)
+..--+.+...+|.|+..+..-++..+- .++.-.+..|++||.|+||.|+.+||......+....
T Consensus 202 ~~~siF~~lg~~GLIsfSdYiFLlTlLS----~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~t 277 (489)
T KOG2643|consen 202 DGDSIFYKLGESGLISFSDYIFLLTLLS----IPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFT 277 (489)
T ss_pred CCCeeEEEcCCCCeeeHHHHHHHHHHHc----cCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCcc
Confidence 3344455667789999999998888775 3455677899999999999999999988876553211
Q ss_pred ----hHHHH--HHHHHhcccCCCccccHHHHHHHHHHHHHHhcc--------cccccCChhhHHHHHHHHhh---hhhHH
Q psy2870 334 ----EEEKL--RWIFCLYDINGDGVISKDDLYNIVSSVYELMGT--------YAYRAFDSGMVAQRVEYLFQ---VSTQR 396 (487)
Q Consensus 334 ----~eekl--~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~--------~~~~~~~~~~~~~~v~~l~~---~~~~~ 396 (487)
....+ -..-..|..+++|.++.+||.++++.+...+-. .....+++....+.+-.... .....
T Consensus 278 t~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~ 357 (489)
T KOG2643|consen 278 TGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQENLQEEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHK 357 (489)
T ss_pred ccceehhhhhhhHHHHhhccCCCccccHHHHHHHHHHHHHHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHH
Confidence 00011 123445789999999999999999887533210 00122444333333332221 22345
Q ss_pred HHHHHHHhhCCCCCCcccHHHHHHHHHHhc---------------------------------cCChHHHHHHHHHHhcc
Q psy2870 397 YAHYVFNTLDHNKTGFLNFEDFVKGLSILC---------------------------------RGSEEEKLRWIFCLYDI 443 (487)
Q Consensus 397 ~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~---------------------------------~~~~~eei~~iF~~~D~ 443 (487)
+++++-+.++.+ +-.|+++||..+..-+. ..+++..+.-+|+.||.
T Consensus 358 ~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~ 436 (489)
T KOG2643|consen 358 YLKRVKEKFKDD-GKGISLQEFKAFFRFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDE 436 (489)
T ss_pred HHHHHHHhccCC-CCCcCHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEcc
Confidence 788888888877 45699999988764321 12233345557999999
Q ss_pred CCCCcccHHHHHHHHHHh
Q psy2870 444 NGDGVISKDDLYNIVSSV 461 (487)
Q Consensus 444 DgDG~Is~eEF~~~l~~l 461 (487)
|+||.++.+||..+|+.-
T Consensus 437 N~Dg~LS~~EFl~Vmk~R 454 (489)
T KOG2643|consen 437 NNDGTLSHKEFLAVMKRR 454 (489)
T ss_pred CCCCcccHHHHHHHHHHH
Confidence 999999999999998864
No 29
>KOG0030|consensus
Probab=98.79 E-value=4.2e-08 Score=86.57 Aligned_cols=110 Identities=21% Similarity=0.365 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCC--CC
Q psy2870 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHN--KT 410 (487)
Q Consensus 333 ~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D--~D 410 (487)
....+++.+|.+||..+||+|+......+++.+ |..+ +. ..+.+ .....+.+ +-
T Consensus 8 d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRal----G~nP----T~----aeV~k------------~l~~~~~~~~~~ 63 (152)
T KOG0030|consen 8 DQMEEFKEAFLLFDRTGDGKISGSQVGDVLRAL----GQNP----TN----AEVLK------------VLGQPKRREMNV 63 (152)
T ss_pred chHHHHHHHHHHHhccCcccccHHHHHHHHHHh----cCCC----cH----HHHHH------------HHcCcccchhhh
Confidence 344789999999999999999999999888875 5432 22 33333 55555555 34
Q ss_pred CcccHHHHHHHHHHhcc---CChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhhhc
Q psy2870 411 GFLNFEDFVKGLSILCR---GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466 (487)
Q Consensus 411 G~Is~eEF~~~l~~l~~---~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~l~ 466 (487)
..|+|++|+-++..+.. ..+-++.-+-++.||++++|.|...|+++++..+|++++
T Consensus 64 ~rl~FE~fLpm~q~vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~ 122 (152)
T KOG0030|consen 64 KRLDFEEFLPMYQQVAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLT 122 (152)
T ss_pred hhhhHHHHHHHHHHHHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhcc
Confidence 68999999999988764 456677888899999999999999999999999999974
No 30
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.78 E-value=1.8e-08 Score=78.48 Aligned_cols=60 Identities=30% Similarity=0.557 Sum_probs=52.0
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHHHHhccCC----hHHHHHHHHHHhccCCCCcccHHHHHHHH
Q psy2870 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGS----EEEKLRWIFCLYDINGDGVISKDDLYNIV 458 (487)
Q Consensus 399 ~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~----~~eei~~iF~~~D~DgDG~Is~eEF~~~l 458 (487)
+.+|+.+|.|++|.|+.+||..++..++... ..+.+..+|+.+|.|+||.|+++||..++
T Consensus 3 ~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 3 KEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 3499999999999999999999999887543 34456777999999999999999999875
No 31
>KOG0377|consensus
Probab=98.70 E-value=3.1e-07 Score=94.40 Aligned_cols=150 Identities=17% Similarity=0.240 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcC-CChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccC
Q psy2870 299 YRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAF 377 (487)
Q Consensus 299 ~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~-~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~ 377 (487)
...+..-|+.+|.+++|.|+...|..++..+.. +.+...+. =++...+.||.+.+.+....+..-. +
T Consensus 463 ~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~--~kla~~s~d~~v~Y~~~~~~l~~e~----------~ 530 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLR--PKLANGSDDGKVEYKSTLDNLDTEV----------I 530 (631)
T ss_pred hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhh--hhccCCCcCcceehHhHHHHhhhhh----------H
Confidence 456677899999999999999999888876542 33333222 2344556677888877766654310 1
Q ss_pred ChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhcc----CChHHHHHHHHHHhccCCCCcccHHH
Q psy2870 378 DSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR----GSEEEKLRWIFCLYDINGDGVISKDD 453 (487)
Q Consensus 378 ~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~----~~~~eei~~iF~~~D~DgDG~Is~eE 453 (487)
..+.-...++.+.. ...-+..+|+.+|.|+.|.|+.+||..+++.+.. .++..++.++-+.+|.|+||.|+++|
T Consensus 531 ~~ea~~slvetLYr--~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNE 608 (631)
T KOG0377|consen 531 LEEAGSSLVETLYR--NKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNE 608 (631)
T ss_pred HHHHHhHHHHHHHh--chhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHH
Confidence 11111111111110 2233555999999999999999999999987654 67888999999999999999999999
Q ss_pred HHHHHHHhh
Q psy2870 454 LYNIVSSVY 462 (487)
Q Consensus 454 F~~~l~~lg 462 (487)
|.++++-.-
T Consensus 609 fLeAFrlvd 617 (631)
T KOG0377|consen 609 FLEAFRLVD 617 (631)
T ss_pred HHHHHhhhc
Confidence 999987543
No 32
>KOG0751|consensus
Probab=98.68 E-value=6.3e-07 Score=93.30 Aligned_cols=141 Identities=22% Similarity=0.337 Sum_probs=101.5
Q ss_pred cHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccC
Q psy2870 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAF 377 (487)
Q Consensus 298 ~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~ 377 (487)
....++-+-..-|.-+||.|+|+||..+-..++ .++.....+|+.||..++|.++.+++..++... ...++..-.+
T Consensus 72 n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC--~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t--~l~~~~~f~~ 147 (694)
T KOG0751|consen 72 NDKIVRLLASIADQTKDGLISFQEFRAFESVLC--APDALFEVAFQLFDRLGNGEVSFEDVADIFGQT--NLHHHIPFNW 147 (694)
T ss_pred ChHHHHHHHhhhhhcccccccHHHHHHHHhhcc--CchHHHHHHHHHhcccCCCceehHHHHHHHhcc--ccccCCCccC
Confidence 344444455566888999999999987776666 557788899999999999999999999998764 1122222223
Q ss_pred ChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHH
Q psy2870 378 DSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457 (487)
Q Consensus 378 ~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~ 457 (487)
+.+.++. .| ..+.-..++|.||.+++..+ -.+...+.|+..|..++|.|+.=+|..+
T Consensus 148 d~efI~~----------------~F---g~~~~r~~ny~~f~Q~lh~~----~~E~~~qafr~~d~~~ng~is~Ldfq~i 204 (694)
T KOG0751|consen 148 DSEFIKL----------------HF---GDIRKRHLNYAEFTQFLHEF----QLEHAEQAFREKDKAKNGFISVLDFQDI 204 (694)
T ss_pred CcchHHH----------------Hh---hhHHHHhccHHHHHHHHHHH----HHHHHHHHHHHhcccCCCeeeeechHhh
Confidence 3332322 22 22334568899999998875 3456788899999999999999999888
Q ss_pred HHHhhhhh
Q psy2870 458 VSSVYELM 465 (487)
Q Consensus 458 l~~lg~~l 465 (487)
+.....++
T Consensus 205 mvt~~~h~ 212 (694)
T KOG0751|consen 205 MVTIRIHL 212 (694)
T ss_pred hhhhhhhc
Confidence 88766554
No 33
>KOG2562|consensus
Probab=98.64 E-value=2e-07 Score=96.69 Aligned_cols=209 Identities=21% Similarity=0.358 Sum_probs=144.4
Q ss_pred Hhhc--CCCCCccHHHHHHHHhhhcCCCCcccccccccccCCCCCCcccchhhhhhhhhccCCCCcccccCCCCCccCHH
Q psy2870 205 FKAE--CPTGTIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAECPTGTIRQD 282 (487)
Q Consensus 205 F~~l--~~~G~i~~~~F~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~l~~~~~sG~Is~e 282 (487)
|.+. +..|.|+...|..++.. ...++.+-+-++++-+...+. +.|...
T Consensus 145 f~k~~~d~~g~it~~~Fi~~~~~---------------------~~~l~~t~~~~~v~~l~~~~~---------~yl~q~ 194 (493)
T KOG2562|consen 145 FRKIDGDDTGHITRDKFINYWMR---------------------GLMLTHTRLEQFVNLLIQAGC---------SYLRQD 194 (493)
T ss_pred hhhhccCcCCceeHHHHHHHHHh---------------------hhhHHHHHHHHHHHHHhccCc---------cceecc
Confidence 5554 45588888888877554 123455555556665544333 556666
Q ss_pred HHHHHHHhhCCCCC------C-------cHHHHHHHHHHhCCCCCCcccHHHHHHH--HHHhcCCCh------------H
Q psy2870 283 TFKGIYAKFFPCGT------S-------SYRYAHYVFNTLDHNKTGFLNFEDFVKG--LSILCRGSE------------E 335 (487)
Q Consensus 283 EF~~il~~l~~~~~------~-------~~~~l~~lF~~~D~d~dG~IdfeEF~~~--L~~l~~~~~------------e 335 (487)
.|+..+..+..... . ....+.++|-.++.-+.|.|+..+.+.. +..+..... -
T Consensus 195 df~~~Lqeli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~ 274 (493)
T KOG2562|consen 195 DFKPYLQELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSY 274 (493)
T ss_pred ccHHHHHHHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeH
Confidence 66666665543211 0 1345778999999999999999997654 222211111 1
Q ss_pred HHHHHH---HHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHH----hhCCC
Q psy2870 336 EKLRWI---FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFN----TLDHN 408 (487)
Q Consensus 336 ekl~~i---F~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~----~~D~D 408 (487)
+....+ |-.+|+|+||.|+.+++...-... .....+++ +|. ..-.-
T Consensus 275 e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~t---------------lt~~ivdR------------IFs~v~r~~~~~ 327 (493)
T KOG2562|consen 275 EHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHT---------------LTERIVDR------------IFSQVPRGFTVK 327 (493)
T ss_pred HHHHHHHHHHhhhccccccccCHHHHHHHhccc---------------hhhHHHHH------------HHhhccccceee
Confidence 222223 667899999999999998765432 23445555 887 33345
Q ss_pred CCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhhhccccc
Q psy2870 409 KTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAY 470 (487)
Q Consensus 409 ~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~l~~~~~ 470 (487)
.+|+++|++|+.++-.+....++.-++.+|+.+|.+++|.|+.+|+..+....-..|.+..-
T Consensus 328 ~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~ 389 (493)
T KOG2562|consen 328 VEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQ 389 (493)
T ss_pred ecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCC
Confidence 68999999999999888778888889999999999999999999999999888877765543
No 34
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.60 E-value=1.6e-07 Score=78.27 Aligned_cols=65 Identities=17% Similarity=0.195 Sum_probs=58.9
Q ss_pred HHHHhhCC-CCCCcccHHHHHHHHHH-hccCChH-HHHHHHHHHhccCCCCcccHHHHHHHHHHhhhh
Q psy2870 400 YVFNTLDH-NKTGFLNFEDFVKGLSI-LCRGSEE-EKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 464 (487)
Q Consensus 400 ~lF~~~D~-D~DG~Is~eEF~~~l~~-l~~~~~~-eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~ 464 (487)
.+|+.+|. +++|.|+..||+.+|.. ++..++. +++..+++.+|.|+||.|+++||..++..+...
T Consensus 12 ~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~~ 79 (89)
T cd05022 12 SNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAKA 79 (89)
T ss_pred HHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHH
Confidence 39999999 99999999999999998 7766666 889999999999999999999999999887543
No 35
>KOG2643|consensus
Probab=98.57 E-value=2.7e-07 Score=95.08 Aligned_cols=138 Identities=22% Similarity=0.397 Sum_probs=97.9
Q ss_pred hCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHH--hcccccccCChhh-HHHH
Q psy2870 309 LDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL--MGTYAYRAFDSGM-VAQR 385 (487)
Q Consensus 309 ~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~--~g~~~~~~~~~~~-~~~~ 385 (487)
++.+.+|.|+|.||+-++..+. .++....-+|++||.||||-|+.+||..+..-+... +|........... ..-.
T Consensus 208 ~~lg~~GLIsfSdYiFLlTlLS--~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~ 285 (489)
T KOG2643|consen 208 YKLGESGLISFSDYIFLLTLLS--IPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVE 285 (489)
T ss_pred EEcCCCCeeeHHHHHHHHHHHc--cCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhh
Confidence 4667899999999999998887 566678889999999999999999999887544211 1110001111110 0101
Q ss_pred HHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhh
Q psy2870 386 VEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 462 (487)
Q Consensus 386 v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg 462 (487)
+.. . -+...|.++++|+++++||.+++..+ ..+.++.-|..+|....|.|+..+|..++..+.
T Consensus 286 ~ns-------a---L~~yFFG~rg~~kLs~deF~~F~e~L----q~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a 348 (489)
T KOG2643|consen 286 VNS-------A---LLTYFFGKRGNGKLSIDEFLKFQENL----QEEILELEFERFDKGDSGAISEVDFAELLLAYA 348 (489)
T ss_pred hhh-------h---HHHHhhccCCCccccHHHHHHHHHHH----HHHHHHHHHHHhCcccccccCHHHHHHHHHHHc
Confidence 111 0 13345678999999999999998876 445566679999998889999999999888765
No 36
>KOG4347|consensus
Probab=98.49 E-value=4.9e-07 Score=97.22 Aligned_cols=126 Identities=27% Similarity=0.493 Sum_probs=99.8
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHhhhcCCCCcccccccccccCCCCCCcccchhhhhhhhh
Q psy2870 182 QSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAECPTGTIRQDTFKGIYAK 261 (487)
Q Consensus 182 ~~l~~l~~~t~fs~~ei~~L~~~F~~l~~~G~i~~~~F~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~i~~d~~~~~~~~ 261 (487)
..++.+.+.+.||..|+..||+.|++.-..+. .+ .. +.++-...+.
T Consensus 487 t~lrs~~~~~~lt~~dL~~lYd~f~~e~~~~~---------------~~------------~~------~~~p~~~~~e- 532 (671)
T KOG4347|consen 487 TILRSVVQTTSLTNTDLENLYDLFKEEHLTNS---------------IG------------LG------RSDPDFEAFE- 532 (671)
T ss_pred HHHHhhcccCccCHHHHHHHHHHHHHHHhccC---------------cc------------cC------CCCCCchHHH-
Confidence 49999999999999999999999998532211 00 00 1111111111
Q ss_pred ccCCCCcccccCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHH
Q psy2870 262 FFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWI 341 (487)
Q Consensus 262 ~~~~~~~~l~~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~i 341 (487)
-.++...|..++..+.++. .+..++.++|+.+|.+++|.|+|.+++.+|..+..+...++++.+
T Consensus 533 ---------------qyi~~~~f~~~f~~l~pw~-~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~ 596 (671)
T KOG4347|consen 533 ---------------QYIDYAQFLEVFRELLPWA-VSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLL 596 (671)
T ss_pred ---------------HHHHHhhHHHHhhccCchh-HHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHH
Confidence 1266777888888887775 577899999999999999999999999999999999999999999
Q ss_pred HHhcccCCCccccHHHH
Q psy2870 342 FCLYDINGDGVISKDDL 358 (487)
Q Consensus 342 F~~~D~DgdG~Is~eEf 358 (487)
|++||.+++ ..+.+|.
T Consensus 597 y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 597 YKLHDPPAD-ELDREEV 612 (671)
T ss_pred HhhccCCcc-ccccccc
Confidence 999999999 9998887
No 37
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.45 E-value=9.1e-07 Score=73.58 Aligned_cols=65 Identities=18% Similarity=0.186 Sum_probs=58.1
Q ss_pred HHHHHhhC-CCCCC-cccHHHHHHHHHH-----hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhh
Q psy2870 399 HYVFNTLD-HNKTG-FLNFEDFVKGLSI-----LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 399 ~~lF~~~D-~D~DG-~Is~eEF~~~l~~-----l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~ 463 (487)
..+|+.+| .|++| .|+.+|+..+|+. ++...+++++..+++.+|.|++|.|+++||..++..+..
T Consensus 11 ~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~~ 82 (88)
T cd05027 11 IDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVTT 82 (88)
T ss_pred HHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 33999998 79999 5999999999998 677788889999999999999999999999988876543
No 38
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.42 E-value=7.8e-07 Score=74.13 Aligned_cols=66 Identities=17% Similarity=0.180 Sum_probs=59.2
Q ss_pred HHHHHHHHHhCC-CCCCcccHHHHHHHHHH-hcCCChH-HHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 300 RYAHYVFNTLDH-NKTGFLNFEDFVKGLSI-LCRGSEE-EKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 300 ~~l~~lF~~~D~-d~dG~IdfeEF~~~L~~-l~~~~~e-ekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
..+..+|+.||. +++|+|+..||..++.. +....+. +.++.+++.+|.|+||.|+++||..++..+
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 467789999999 99999999999999998 6654555 889999999999999999999999998876
No 39
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.41 E-value=1.2e-06 Score=67.85 Aligned_cols=63 Identities=21% Similarity=0.268 Sum_probs=56.5
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhh
Q psy2870 400 YVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 464 (487)
Q Consensus 400 ~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~ 464 (487)
.+|..+|.+++|.|+.+|+..++... +.+.+.+..+|..+|.+++|.|+++||..++..+.-+
T Consensus 3 ~~F~~~D~~~~G~i~~~el~~~l~~~--g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~~~ 65 (67)
T cd00052 3 QIFRSLDPDGDGLISGDEARPFLGKS--GLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIALA 65 (67)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHHHH
Confidence 38999999999999999999999875 3578889999999999999999999999998876554
No 40
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.40 E-value=7.9e-07 Score=66.51 Aligned_cols=52 Identities=33% Similarity=0.512 Sum_probs=48.2
Q ss_pred CCCcccHHHHHHHHHHhccC-ChHHHHHHHHHHhccCCCCcccHHHHHHHHHH
Q psy2870 409 KTGFLNFEDFVKGLSILCRG-SEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460 (487)
Q Consensus 409 ~DG~Is~eEF~~~l~~l~~~-~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~ 460 (487)
.+|.|+.++|..+|..++.. .+++++..+|..+|.|++|+|+++||..++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 37999999999999877778 99999999999999999999999999999875
No 41
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.40 E-value=1.3e-06 Score=73.28 Aligned_cols=64 Identities=13% Similarity=0.107 Sum_probs=55.1
Q ss_pred HHHHhhC-CCCCC-cccHHHHHHHHHHh-----ccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhh
Q psy2870 400 YVFNTLD-HNKTG-FLNFEDFVKGLSIL-----CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 400 ~lF~~~D-~D~DG-~Is~eEF~~~l~~l-----~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~ 463 (487)
++|..+| .|++| .|+..||..++... ....++.++..++..+|.|+||.|+++||..++..+..
T Consensus 14 ~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~~ 84 (93)
T cd05026 14 RIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALTV 84 (93)
T ss_pred HHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 3899999 78998 59999999999763 23346778999999999999999999999999988744
No 42
>KOG4251|consensus
Probab=98.36 E-value=2.5e-06 Score=81.95 Aligned_cols=171 Identities=13% Similarity=0.116 Sum_probs=111.2
Q ss_pred cCCCCCccCHHHHHHHHHhhCC-CCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCC------------------
Q psy2870 272 AECPTGTIRQDTFKGIYAKFFP-CGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG------------------ 332 (487)
Q Consensus 272 ~~~~sG~Is~eEF~~il~~l~~-~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~------------------ 332 (487)
+...+|.|+..|+++.+..-.. .-.......+.-|+..|+|+||.|+++||..-+......
T Consensus 111 DVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekevadairlneelkVD 190 (362)
T KOG4251|consen 111 DVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEELKVD 190 (362)
T ss_pred ccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHHHhhccCccccc
Confidence 3445688888888877655211 000112334457889999999999999997554332100
Q ss_pred ------------------------------------------ChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhc
Q psy2870 333 ------------------------------------------SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 370 (487)
Q Consensus 333 ------------------------------------------~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g 370 (487)
.....++.+.+.+|.|||..++..||....-... .
T Consensus 191 eEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTV---e 267 (362)
T KOG4251|consen 191 EETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTV---E 267 (362)
T ss_pred HHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcch---h
Confidence 0112234456667888888888888876543211 1
Q ss_pred ccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCccc
Q psy2870 371 TYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450 (487)
Q Consensus 371 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is 450 (487)
......++...++...+. .-..+|.|.||.++++|+...+..........++..++..-|.|++..++
T Consensus 268 nqqgqdiddnwvkdRkkE------------FeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~ma~~d~n~~~~Ls 335 (362)
T KOG4251|consen 268 NQQGQDIDDNWVKDRKKE------------FEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDIMALTDANNDEKLS 335 (362)
T ss_pred hhhccchHHHHHHHHHHH------------HHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHHHhhhccCCCcccC
Confidence 112223444444554444 56678999999999999998865544445556788888999999999999
Q ss_pred HHHHHHH
Q psy2870 451 KDDLYNI 457 (487)
Q Consensus 451 ~eEF~~~ 457 (487)
.+|+...
T Consensus 336 ~eell~r 342 (362)
T KOG4251|consen 336 LEELLER 342 (362)
T ss_pred HHHHHHH
Confidence 9998754
No 43
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.34 E-value=3e-06 Score=71.31 Aligned_cols=66 Identities=26% Similarity=0.352 Sum_probs=59.3
Q ss_pred HHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhhhc
Q psy2870 399 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466 (487)
Q Consensus 399 ~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~l~ 466 (487)
..+|..+|.|++|.|+.+|+..++... +.+.+++..+|..+|.+++|.|+++||..++..+.....
T Consensus 13 ~~~F~~~D~d~~G~Is~~el~~~l~~~--~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 78 (96)
T smart00027 13 EQIFRSLDKNQDGTVTGAQAKPILLKS--GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLN 78 (96)
T ss_pred HHHHHHhCCCCCCeEeHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHHc
Confidence 339999999999999999999999874 578889999999999999999999999999998876543
No 44
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.34 E-value=2.6e-06 Score=70.80 Aligned_cols=63 Identities=8% Similarity=0.123 Sum_probs=56.9
Q ss_pred HHHhhCC-CC-CCcccHHHHHHHHHH---hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhh
Q psy2870 401 VFNTLDH-NK-TGFLNFEDFVKGLSI---LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 401 lF~~~D~-D~-DG~Is~eEF~~~l~~---l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~ 463 (487)
+|..+|. |+ +|.|+.+||..++.. ++...+++++..+++.+|.|++|.|+++||..++..+..
T Consensus 15 ~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~~ 82 (88)
T cd05029 15 IFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALAL 82 (88)
T ss_pred HHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHH
Confidence 8999998 77 899999999999974 466789999999999999999999999999999987754
No 45
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.34 E-value=2.5e-06 Score=71.55 Aligned_cols=65 Identities=15% Similarity=0.178 Sum_probs=56.9
Q ss_pred HHHhhCC-CC-CCcccHHHHHHHHHH-----hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhhh
Q psy2870 401 VFNTLDH-NK-TGFLNFEDFVKGLSI-----LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 465 (487)
Q Consensus 401 lF~~~D~-D~-DG~Is~eEF~~~l~~-----l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~l 465 (487)
+|..+|. |+ +|.|+.+|+..++.. ++...+.+++..++..+|.|++|.|+++||..++..++-..
T Consensus 13 ~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~~~ 84 (94)
T cd05031 13 TFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSIAC 84 (94)
T ss_pred HHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHH
Confidence 9999997 97 699999999999986 34466888999999999999999999999999998766543
No 46
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.32 E-value=2.5e-06 Score=63.48 Aligned_cols=59 Identities=22% Similarity=0.406 Sum_probs=55.3
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHH
Q psy2870 400 YVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 458 (487)
Q Consensus 400 ~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l 458 (487)
.+|..+|.+++|.|+++||..++..++...+.+.+..+|..+|.+++|.|++++|..++
T Consensus 4 ~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 4 EAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 38999999999999999999999998888899999999999999999999999998765
No 47
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.31 E-value=2.6e-06 Score=63.46 Aligned_cols=61 Identities=21% Similarity=0.390 Sum_probs=56.5
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHH
Q psy2870 302 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 362 (487)
Q Consensus 302 l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l 362 (487)
+..+|..+|.+++|.|++.||..++..+......+.+..+|..+|.+++|.|++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 4678999999999999999999999999888889999999999999999999999998764
No 48
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.31 E-value=3.7e-06 Score=70.25 Aligned_cols=67 Identities=18% Similarity=0.216 Sum_probs=57.3
Q ss_pred HHHHHHhhC-CCCCC-cccHHHHHHHHHH-hcc----CChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhh
Q psy2870 398 AHYVFNTLD-HNKTG-FLNFEDFVKGLSI-LCR----GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 464 (487)
Q Consensus 398 ~~~lF~~~D-~D~DG-~Is~eEF~~~l~~-l~~----~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~ 464 (487)
++++|..+| .+++| .|+..|+..++.. ++. ..+.+++..+|..+|.|++|.|+++||..++..+...
T Consensus 11 l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~~~ 84 (92)
T cd05025 11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTVA 84 (92)
T ss_pred HHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHH
Confidence 334999997 99999 5999999999975 432 3577889999999999999999999999999887654
No 49
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.29 E-value=3.2e-06 Score=70.27 Aligned_cols=66 Identities=18% Similarity=0.166 Sum_probs=59.5
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHH-----hcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 300 RYAHYVFNTLD-HNKTG-FLNFEDFVKGLSI-----LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 300 ~~l~~lF~~~D-~d~dG-~IdfeEF~~~L~~-----l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
..+..+|..|| .+++| .|+..|+..+|.. +....+++.+..+++.+|.|++|.|+++||..++..+
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46788999998 79999 5999999999998 7767788889999999999999999999999888765
No 50
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.28 E-value=3.2e-06 Score=65.39 Aligned_cols=61 Identities=20% Similarity=0.266 Sum_probs=55.0
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 303 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 303 ~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
+.+|..+|.+++|.|+.+|+..++..++ .+.+.++.+|+.+|.+++|.|+++||..++..+
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4689999999999999999999998764 477889999999999999999999999988765
No 51
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.25 E-value=4.7e-06 Score=68.81 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=56.6
Q ss_pred HHHHHHhhCC--CCCCcccHHHHHHHHHH-hccC----ChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhh
Q psy2870 398 AHYVFNTLDH--NKTGFLNFEDFVKGLSI-LCRG----SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 398 ~~~lF~~~D~--D~DG~Is~eEF~~~l~~-l~~~----~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~ 463 (487)
++.+|..+|. +++|.|+.+||..++.. ++.. .+..++..++..+|.+++|.|+++||..++.....
T Consensus 10 l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~~ 82 (88)
T cd00213 10 IIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLAV 82 (88)
T ss_pred HHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHH
Confidence 3349999999 89999999999999976 3322 34788999999999999999999999999987754
No 52
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.24 E-value=2.7e-06 Score=74.42 Aligned_cols=62 Identities=21% Similarity=0.385 Sum_probs=51.0
Q ss_pred ChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCc
Q psy2870 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGF 412 (487)
Q Consensus 333 ~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~ 412 (487)
....++.|+|..+|.|+||.|+.+|+..+. + + ..+..+.. +|..+|.|+||.
T Consensus 45 ~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l----~----------~~e~~~~~------------f~~~~D~n~Dg~ 96 (116)
T cd00252 45 MCKDPVGWMFNQLDGNYDGKLSHHELAPIR--L----D----------PNEHCIKP------------FFESCDLDKDGS 96 (116)
T ss_pred HHHHHHHHHHHHHCCCCCCcCCHHHHHHHH--c----c----------chHHHHHH------------HHHHHCCCCCCC
Confidence 345689999999999999999999999765 1 1 11334455 999999999999
Q ss_pred ccHHHHHHHH
Q psy2870 413 LNFEDFVKGL 422 (487)
Q Consensus 413 Is~eEF~~~l 422 (487)
||++||..++
T Consensus 97 IS~~Ef~~cl 106 (116)
T cd00252 97 ISLDEWCYCF 106 (116)
T ss_pred CCHHHHHHHH
Confidence 9999999998
No 53
>KOG4251|consensus
Probab=98.23 E-value=3.8e-06 Score=80.75 Aligned_cols=197 Identities=16% Similarity=0.149 Sum_probs=116.9
Q ss_pred ccCCCCcccccCCCCCccCHHHHHHHH-Hh-hCCCCC-----CcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcC---
Q psy2870 262 FFPCGSTYLKAECPTGTIRQDTFKGIY-AK-FFPCGT-----SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR--- 331 (487)
Q Consensus 262 ~~~~~~~~l~~~~~sG~Is~eEF~~il-~~-l~~~~~-----~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~--- 331 (487)
|+|..........-+|.++.-=-+..+ +. ++.... .....+..+|...|.|.||.|+..|..+.+..-..
T Consensus 56 iLppDHlngvkLEmDGhLNrgFhQEvflgkdLggfDedaeprrsrrklmviFsKvDVNtDrkisAkEmqrwImektaEHf 135 (362)
T KOG4251|consen 56 ILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHF 135 (362)
T ss_pred cCCcccccccccccccccchhhhhhheeccCCCCcccccchhHHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHH
Confidence 345455555555556666543222221 11 111100 12456778999999999999999999877654331
Q ss_pred CChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhccc---------cc--ccCChhhHHHHHHHHh----------
Q psy2870 332 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTY---------AY--RAFDSGMVAQRVEYLF---------- 390 (487)
Q Consensus 332 ~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~---------~~--~~~~~~~~~~~v~~l~---------- 390 (487)
....+.-+..|+..|.||||.|+++||..-+.+.. |+. .. -.++. ..+..++.+.
T Consensus 136 qeameeSkthFraVDpdgDGhvsWdEykvkFlask---ghsekevadairlneelkVDe-EtqevlenlkdRwyqaDspp 211 (362)
T KOG4251|consen 136 QEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASK---GHSEKEVADAIRLNEELKVDE-ETQEVLENLKDRWYQADSPP 211 (362)
T ss_pred HHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhc---CcchHHHHHHhhccCcccccH-HHHHHHHhhhhhhccccCch
Confidence 12234455689999999999999999986554321 110 00 00111 1111111110
Q ss_pred -------------------hhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhc-----cCCh----HHHHHHHHHHhc
Q psy2870 391 -------------------QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-----RGSE----EEKLRWIFCLYD 442 (487)
Q Consensus 391 -------------------~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~-----~~~~----~eei~~iF~~~D 442 (487)
.......+..+...+|+|+|..++..||+.+..... ..+. ....+++=..+|
T Consensus 212 adlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElID 291 (362)
T KOG4251|consen 212 ADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELID 291 (362)
T ss_pred hhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhh
Confidence 011124466688899999999999999998743211 1111 233455567789
Q ss_pred cCCCCcccHHHHHHHHHHhh
Q psy2870 443 INGDGVISKDDLYNIVSSVY 462 (487)
Q Consensus 443 ~DgDG~Is~eEF~~~l~~lg 462 (487)
.|.||.++++|+..++.-..
T Consensus 292 sNhDGivTaeELe~y~dP~n 311 (362)
T KOG4251|consen 292 SNHDGIVTAEELEDYVDPQN 311 (362)
T ss_pred cCCccceeHHHHHhhcCchh
Confidence 99999999999988765443
No 54
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.22 E-value=6.5e-06 Score=69.28 Aligned_cols=70 Identities=24% Similarity=0.300 Sum_probs=61.4
Q ss_pred cHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHh
Q psy2870 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 369 (487)
Q Consensus 298 ~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~ 369 (487)
....+..+|..+|.+++|.|+.+|+..++... +...+.+..+|..+|.+++|.|+++||..++..+..+.
T Consensus 8 ~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~--~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~ 77 (96)
T smart00027 8 DKAKYEQIFRSLDKNQDGTVTGAQAKPILLKS--GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKL 77 (96)
T ss_pred HHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999999885 46778899999999999999999999999998775433
No 55
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.21 E-value=5.7e-06 Score=68.93 Aligned_cols=63 Identities=16% Similarity=0.277 Sum_probs=55.0
Q ss_pred HHHh-hCCCCCC-cccHHHHHHHHHHhc-----cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhh
Q psy2870 401 VFNT-LDHNKTG-FLNFEDFVKGLSILC-----RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 401 lF~~-~D~D~DG-~Is~eEF~~~l~~l~-----~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~ 463 (487)
+|+. +|.+++| .|+.+||..++.... ....+.++..+++.+|.|+||.|+++||..++..+..
T Consensus 14 ~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~~ 83 (89)
T cd05023 14 VFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAV 83 (89)
T ss_pred HHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 8998 7888886 999999999998753 3456788999999999999999999999999987754
No 56
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.20 E-value=6.4e-06 Score=68.76 Aligned_cols=67 Identities=18% Similarity=0.231 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhC-CCCCC-cccHHHHHHHHHH-hc----CCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 299 YRYAHYVFNTLD-HNKTG-FLNFEDFVKGLSI-LC----RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 299 ~~~l~~lF~~~D-~d~dG-~IdfeEF~~~L~~-l~----~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
...+.++|..|| .+++| .|+..|+..+|.. ++ ...+.+.++.+|+.+|.|++|.|+++||..++..+
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 456889999997 99999 5999999999975 42 23577889999999999999999999999988775
No 57
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.19 E-value=6.4e-06 Score=69.13 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=56.5
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHHh-----cCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 300 RYAHYVFNTLD-HNKTG-FLNFEDFVKGLSIL-----CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 300 ~~l~~lF~~~D-~d~dG-~IdfeEF~~~L~~l-----~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
..+.++|..|| .|++| +|+..|+..++... ........+..+++.+|.|++|.|+++||..++..+
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 45678899999 78998 59999999999763 233467789999999999999999999999998876
No 58
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.19 E-value=4e-06 Score=62.65 Aligned_cols=50 Identities=32% Similarity=0.512 Sum_probs=34.7
Q ss_pred CCcccHHHHHHHHHHhcCC-ChHHHHHHHHHhcccCCCccccHHHHHHHHH
Q psy2870 314 TGFLNFEDFVKGLSILCRG-SEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363 (487)
Q Consensus 314 dG~IdfeEF~~~L~~l~~~-~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~ 363 (487)
+|.|+.++|..+|..++.. ..++++..+|..+|.|++|.|+++||..++.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 5677777777777665555 6666677777777777777777777776664
No 59
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.18 E-value=6.7e-06 Score=68.99 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhCC-CC-CCcccHHHHHHHHHH-----hcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 299 YRYAHYVFNTLDH-NK-TGFLNFEDFVKGLSI-----LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 299 ~~~l~~lF~~~D~-d~-dG~IdfeEF~~~L~~-----l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
...+..+|..||. |+ +|.|+..|+..++.. +....+++.+..+++.+|.+++|.|+++||..++...
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3557789999997 97 699999999999876 3445678899999999999999999999999988764
No 60
>KOG0038|consensus
Probab=98.18 E-value=7.9e-06 Score=72.84 Aligned_cols=106 Identities=24% Similarity=0.441 Sum_probs=80.7
Q ss_pred HHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHH
Q psy2870 340 WIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFV 419 (487)
Q Consensus 340 ~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~ 419 (487)
.+...|-.||.|.+++++|..++.-+..+ .+ ..-. +.++|+.+|-|+|+.|..+++.
T Consensus 75 ri~e~FSeDG~GnlsfddFlDmfSV~sE~---------AP--rdlK------------~~YAFkIYDfd~D~~i~~~DL~ 131 (189)
T KOG0038|consen 75 RICEVFSEDGRGNLSFDDFLDMFSVFSEM---------AP--RDLK------------AKYAFKIYDFDGDEFIGHDDLE 131 (189)
T ss_pred HHHHHhccCCCCcccHHHHHHHHHHHHhh---------Ch--HHhh------------hhheeEEeecCCCCcccHHHHH
Confidence 44555668999999999999988754211 11 1112 2339999999999999999999
Q ss_pred HHHHHhcc-CChHHHH----HHHHHHhccCCCCcccHHHHHHHHHHhhhhhccc
Q psy2870 420 KGLSILCR-GSEEEKL----RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTY 468 (487)
Q Consensus 420 ~~l~~l~~-~~~~eei----~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~l~~~ 468 (487)
..+..+.+ .++++++ ..+....|.||||+|++.||..++....+.+.++
T Consensus 132 ~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~raPDFlsTF 185 (189)
T KOG0038|consen 132 KTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILRAPDFLSTF 185 (189)
T ss_pred HHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhCcchHhhh
Confidence 99998765 4666654 4567788999999999999999998877765543
No 61
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.13 E-value=9.6e-06 Score=70.92 Aligned_cols=56 Identities=27% Similarity=0.357 Sum_probs=49.8
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q psy2870 400 YVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 459 (487)
Q Consensus 400 ~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~ 459 (487)
-+|..+|.|+||.|+.+|+..++ ....+..+..+|..+|.|+||.||++||..++.
T Consensus 52 w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 52 WMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 39999999999999999999875 234567789999999999999999999999984
No 62
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.04 E-value=1.8e-05 Score=65.31 Aligned_cols=67 Identities=16% Similarity=0.213 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhCC--CCCCcccHHHHHHHHHH-hcC----CChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 299 YRYAHYVFNTLDH--NKTGFLNFEDFVKGLSI-LCR----GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 299 ~~~l~~lF~~~D~--d~dG~IdfeEF~~~L~~-l~~----~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
...+..+|..+|. +++|.|+..||..++.. +.. ......+..++..+|.+++|.|++++|..++...
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 3557889999999 89999999999999975 332 2347889999999999999999999999988764
No 63
>KOG2562|consensus
Probab=98.03 E-value=4.3e-05 Score=79.74 Aligned_cols=125 Identities=15% Similarity=0.264 Sum_probs=93.4
Q ss_pred CCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHH----hCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCc
Q psy2870 276 TGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNT----LDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDG 351 (487)
Q Consensus 276 sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~----~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG 351 (487)
+|.|+.++++..-... .....++++|.. +-.-.+|.++|++|+-++-.+.......-++..|+.+|.+++|
T Consensus 292 d~lidk~~L~ry~d~t-----lt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G 366 (493)
T KOG2562|consen 292 DGLIDKEDLKRYGDHT-----LTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDG 366 (493)
T ss_pred ccccCHHHHHHHhccc-----hhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCC
Confidence 4666666666543332 356789999993 3345689999999999998888778888999999999999999
Q ss_pred cccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy2870 352 VISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420 (487)
Q Consensus 352 ~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~ 420 (487)
.|+..|+.-+.......+.......+ ..+..+.+ ++..+-....++|++++|+.
T Consensus 367 ~Lt~~el~~fyeeq~~rm~~~~~e~l---~fed~l~q------------i~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 367 ILTLNELRYFYEEQLQRMECMGQEAL---PFEDALCQ------------IRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCcc---cHHHHHHH------------HHHHhCccCCCceeHHHHhh
Confidence 99999999988876554443322222 23444444 77777777789999999987
No 64
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.99 E-value=2.4e-05 Score=65.05 Aligned_cols=65 Identities=8% Similarity=0.117 Sum_probs=56.8
Q ss_pred HHHHHHHHhCC-CC-CCcccHHHHHHHHHH---hcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 301 YAHYVFNTLDH-NK-TGFLNFEDFVKGLSI---LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 301 ~l~~lF~~~D~-d~-dG~IdfeEF~~~L~~---l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
.+-.+|..||. ++ +|+|+..||..++.. ++...+.+.+..+|+.+|.|++|.|+++||..++..+
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 45578999998 77 899999999999963 4566788999999999999999999999999888765
No 65
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.94 E-value=1.1e-05 Score=52.80 Aligned_cols=27 Identities=26% Similarity=0.512 Sum_probs=18.0
Q ss_pred HHHHHHHhccCCCCcccHHHHHHHHHH
Q psy2870 434 LRWIFCLYDINGDGVISKDDLYNIVSS 460 (487)
Q Consensus 434 i~~iF~~~D~DgDG~Is~eEF~~~l~~ 460 (487)
+..+|+.+|+|+||+|+++||..+++.
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 556666667777777777776666654
No 66
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.90 E-value=5.9e-05 Score=62.85 Aligned_cols=66 Identities=15% Similarity=0.249 Sum_probs=56.0
Q ss_pred HHHHHHHHH-hCCCCCC-cccHHHHHHHHHHhc-----CCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 300 RYAHYVFNT-LDHNKTG-FLNFEDFVKGLSILC-----RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 300 ~~l~~lF~~-~D~d~dG-~IdfeEF~~~L~~l~-----~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
..+..+|.. +|.+++| .|+..||..++.... .......+..+++.+|.|+||.|+++||..++..+
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 456788998 7788876 999999999998763 34556889999999999999999999999988775
No 67
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.87 E-value=7e-05 Score=62.16 Aligned_cols=63 Identities=22% Similarity=0.217 Sum_probs=53.6
Q ss_pred HHHhhCCC--CCCcccHHHHHHHHHH-hccCCh----HHHHHHHHHHhccCCCCcccHHHHHHHHHHhhh
Q psy2870 401 VFNTLDHN--KTGFLNFEDFVKGLSI-LCRGSE----EEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 401 lF~~~D~D--~DG~Is~eEF~~~l~~-l~~~~~----~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~ 463 (487)
+|..++.. .+|.|+.+||..++.. ++...+ +.++..+|..+|.|++|.|+++||..++..+..
T Consensus 13 ~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 13 VFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred HHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 89988865 4789999999999974 333444 889999999999999999999999999987754
No 68
>KOG0377|consensus
Probab=97.74 E-value=0.00041 Score=71.98 Aligned_cols=67 Identities=18% Similarity=0.356 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcC----CChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 299 YRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR----GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 299 ~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~----~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
...+..+|+.+|.|++|.|+.+||..++..+.. ......+..+-+.+|.|+||.|+..||..+++-+
T Consensus 546 ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 546 KSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred hhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 345678999999999999999999999987753 4677888899999999999999999999988754
No 69
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.72 E-value=4.4e-05 Score=50.00 Aligned_cols=25 Identities=24% Similarity=0.549 Sum_probs=12.1
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHH
Q psy2870 303 HYVFNTLDHNKTGFLNFEDFVKGLS 327 (487)
Q Consensus 303 ~~lF~~~D~d~dG~IdfeEF~~~L~ 327 (487)
+.+|+.+|+|+||.|+++||+.++.
T Consensus 3 ~~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 3 KEAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 3444455555555555555544443
No 70
>KOG0041|consensus
Probab=97.68 E-value=0.00014 Score=68.36 Aligned_cols=66 Identities=18% Similarity=0.264 Sum_probs=59.2
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhh
Q psy2870 398 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 398 ~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~ 463 (487)
+..+|+.+|.+.||+|++.|+..+|.+++..-+---++.+++..|-|.||+|++-||.-+++....
T Consensus 101 ~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaa 166 (244)
T KOG0041|consen 101 AESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAA 166 (244)
T ss_pred HHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhc
Confidence 444999999999999999999999999987777777899999999999999999999998887544
No 71
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.68 E-value=0.00017 Score=59.86 Aligned_cols=70 Identities=19% Similarity=0.393 Sum_probs=51.6
Q ss_pred HHHHHHHhcccC--CCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCccc
Q psy2870 337 KLRWIFCLYDIN--GDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLN 414 (487)
Q Consensus 337 kl~~iF~~~D~D--gdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is 414 (487)
.+-.+|+.|+.. ++|.|+.+||..++...+ +.. +........++. +|+.+|.|++|.|+
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~---g~~----~t~~~~~~~v~~------------i~~~~D~d~dG~I~ 69 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKEL---PNF----LKKEKNQKAIDK------------IFEDLDTNQDGQLS 69 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHh---hHh----hccCCCHHHHHH------------HHHHcCCCCCCcCc
Confidence 556789999876 479999999999997431 111 111112445555 99999999999999
Q ss_pred HHHHHHHHHHh
Q psy2870 415 FEDFVKGLSIL 425 (487)
Q Consensus 415 ~eEF~~~l~~l 425 (487)
|+||+.++..+
T Consensus 70 f~eF~~~~~~~ 80 (88)
T cd05030 70 FEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 72
>KOG4666|consensus
Probab=97.62 E-value=5.1e-05 Score=75.84 Aligned_cols=117 Identities=20% Similarity=0.250 Sum_probs=91.0
Q ss_pred CccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcC-CChHHHHHHHHHhcccCCCccccH
Q psy2870 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGDGVISK 355 (487)
Q Consensus 277 G~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~-~~~eekl~~iF~~~D~DgdG~Is~ 355 (487)
+.|...||..-+.. ...+.+..+|..||.+++|.+||.|.+..+..++. ..+.+.++.+|++|+.+.||.+..
T Consensus 242 ~~igi~efa~~l~v------pvsd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge 315 (412)
T KOG4666|consen 242 PDIGIVEFAVNLRV------PVSDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGE 315 (412)
T ss_pred CCcceeEeeeeeec------chhhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccch
Confidence 45555555543332 23477889999999999999999999999998875 567889999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q psy2870 356 DDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424 (487)
Q Consensus 356 eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~ 424 (487)
.+|.-+++... |-. .-.+-. +|...+...+|+|++.+|..++..
T Consensus 316 ~~ls~ilq~~l---gv~----------~l~v~~------------lf~~i~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 316 HILSLILQVVL---GVE----------VLRVPV------------LFPSIEQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred HHHHHHHHHhc---Ccc----------eeeccc------------cchhhhcccCcceeHHHHHHHHHh
Confidence 98888877641 210 011222 899999999999999999999865
No 73
>PF14658 EF-hand_9: EF-hand domain
Probab=97.62 E-value=0.00019 Score=56.12 Aligned_cols=61 Identities=25% Similarity=0.391 Sum_probs=57.6
Q ss_pred HHHHHhCCCCCCcccHHHHHHHHHHhcC-CChHHHHHHHHHhcccCCC-ccccHHHHHHHHHH
Q psy2870 304 YVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGD-GVISKDDLYNIVSS 364 (487)
Q Consensus 304 ~lF~~~D~d~dG~IdfeEF~~~L~~l~~-~~~eekl~~iF~~~D~Dgd-G~Is~eEf~~~l~~ 364 (487)
.+|.+||.++.|.|...+++.+|+.+.. ...+.+++.+.+.+|.+|. |.|+++.|..+|+.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 3699999999999999999999999998 8999999999999999998 99999999999875
No 74
>KOG0041|consensus
Probab=97.56 E-value=0.00028 Score=66.27 Aligned_cols=69 Identities=17% Similarity=0.261 Sum_probs=63.8
Q ss_pred CcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 297 SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 297 ~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
.....+..+|+.||.+.||+|++.|+..+|..++...+.--++.+.+.+|.|.||+|++.||.-+++..
T Consensus 96 kqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrka 164 (244)
T KOG0041|consen 96 KQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKA 164 (244)
T ss_pred HHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence 345678899999999999999999999999999988888899999999999999999999999988875
No 75
>KOG0751|consensus
Probab=97.45 E-value=0.0019 Score=67.99 Aligned_cols=172 Identities=15% Similarity=0.241 Sum_probs=115.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCC--CccHHHHHHHHhhhcCCCCcccccccccccCCCCCCcccchhhhhhhhhccCCCCcc
Q psy2870 192 KFSEAEIKKIYRNFKAECPTG--TIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAECPTGTIRQDTFKGIYAKFFPCGSTY 269 (487)
Q Consensus 192 ~fs~~ei~~L~~~F~~l~~~G--~i~~~~F~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~ 269 (487)
+-.++|+..++-+|.....+| .++.++|..-+.-++... +. -+++..+..+
T Consensus 29 ra~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~--------------~~-----n~~~v~Lla~-------- 81 (694)
T KOG0751|consen 29 RADPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNES--------------NF-----NDKIVRLLAS-------- 81 (694)
T ss_pred cCChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccc--------------cC-----ChHHHHHHHh--------
Confidence 457889999999998876554 799999988776655443 11 1233333333
Q ss_pred cccCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCC------ChHHHHHHHHH
Q psy2870 270 LKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG------SEEEKLRWIFC 343 (487)
Q Consensus 270 l~~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~------~~eekl~~iF~ 343 (487)
..+...+|.|+.+||+.+-..++ .++.....+|..||+.++|.++++++...+...... -..+-++..|
T Consensus 82 iaD~tKDglisf~eF~afe~~lC----~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~F- 156 (694)
T KOG0751|consen 82 IADQTKDGLISFQEFRAFESVLC----APDALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHF- 156 (694)
T ss_pred hhhhcccccccHHHHHHHHhhcc----CchHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHh-
Confidence 23455679999999998877776 456778889999999999999999999998765421 1223333322
Q ss_pred hcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHH
Q psy2870 344 LYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423 (487)
Q Consensus 344 ~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~ 423 (487)
..+.--.+++.||.+++..+. .+...+ .|+.-|..++|.|+--+|...|.
T Consensus 157 --g~~~~r~~ny~~f~Q~lh~~~----------------~E~~~q------------afr~~d~~~ng~is~Ldfq~imv 206 (694)
T KOG0751|consen 157 --GDIRKRHLNYAEFTQFLHEFQ----------------LEHAEQ------------AFREKDKAKNGFISVLDFQDIMV 206 (694)
T ss_pred --hhHHHHhccHHHHHHHHHHHH----------------HHHHHH------------HHHHhcccCCCeeeeechHhhhh
Confidence 233444577777777776642 122233 77777777777777777776665
Q ss_pred Hh
Q psy2870 424 IL 425 (487)
Q Consensus 424 ~l 425 (487)
..
T Consensus 207 t~ 208 (694)
T KOG0751|consen 207 TI 208 (694)
T ss_pred hh
Confidence 43
No 76
>PF14658 EF-hand_9: EF-hand domain
Probab=97.43 E-value=0.0005 Score=53.76 Aligned_cols=60 Identities=25% Similarity=0.408 Sum_probs=56.9
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhcc-CChHHHHHHHHHHhccCCC-CcccHHHHHHHHHH
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGD-GVISKDDLYNIVSS 460 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~~-~~~~eei~~iF~~~D~DgD-G~Is~eEF~~~l~~ 460 (487)
+|..+|.++.|.|...+++..|+.++. ...+.++..+...+|.++. |.|+++.|+.+|+.
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 899999999999999999999999888 8888999999999999998 99999999999975
No 77
>KOG4666|consensus
Probab=97.40 E-value=0.00017 Score=72.13 Aligned_cols=127 Identities=15% Similarity=0.194 Sum_probs=98.5
Q ss_pred CCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHh
Q psy2870 311 HNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390 (487)
Q Consensus 311 ~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~ 390 (487)
..+.+.|...||...++. ...+++..+|.+||.+++|.+++.|....+.-+ .........++.
T Consensus 238 ~~kg~~igi~efa~~l~v----pvsd~l~~~f~LFde~~tg~~D~re~v~~lavl-----------c~p~~t~~iiq~-- 300 (412)
T KOG4666|consen 238 EAKGPDIGIVEFAVNLRV----PVSDKLAPTFMLFDEGTTGNGDYRETVKTLAVL-----------CGPPVTPVIIQY-- 300 (412)
T ss_pred hccCCCcceeEeeeeeec----chhhhhhhhhheecCCCCCcccHHHHhhhheee-----------eCCCCcHHHHHH--
Confidence 446677777777665543 334788999999999999999999987766543 122334455666
Q ss_pred hhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhhh
Q psy2870 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 465 (487)
Q Consensus 391 ~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~l 465 (487)
.|+.|+.+.||.+.-++|..+++.. .+...-.+-.+|..++...+|+|++.+|+.++...++..
T Consensus 301 ----------afk~f~v~eDg~~ge~~ls~ilq~~-lgv~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~~a 364 (412)
T KOG4666|consen 301 ----------AFKRFSVAEDGISGEHILSLILQVV-LGVEVLRVPVLFPSIEQKDDPKIYASNFRKFAATEPNLA 364 (412)
T ss_pred ----------HHHhcccccccccchHHHHHHHHHh-cCcceeeccccchhhhcccCcceeHHHHHHHHHhCchhh
Confidence 9999999999999999998887763 445555677899999999999999999999998877654
No 78
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.39 E-value=0.00021 Score=47.30 Aligned_cols=29 Identities=38% Similarity=0.605 Sum_probs=20.7
Q ss_pred HHHHHHHhccCCCCcccHHHHHHHHH-Hhh
Q psy2870 434 LRWIFCLYDINGDGVISKDDLYNIVS-SVY 462 (487)
Q Consensus 434 i~~iF~~~D~DgDG~Is~eEF~~~l~-~lg 462 (487)
+..+|+.+|.|++|+|+.+||..+++ ++|
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 56677778888888888888877777 443
No 79
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.37 E-value=0.00082 Score=70.63 Aligned_cols=56 Identities=21% Similarity=0.395 Sum_probs=48.9
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhh
Q psy2870 395 QRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 395 ~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~ 463 (487)
..+++.+|+.+|.|+||.|+.+||.. +..+|..+|.|+||.|+++||..++.....
T Consensus 333 ~~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~~ 388 (391)
T PRK12309 333 THAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGAALR 388 (391)
T ss_pred hHHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 45566699999999999999999952 467899999999999999999999987654
No 80
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.35 E-value=0.00044 Score=72.65 Aligned_cols=57 Identities=21% Similarity=0.360 Sum_probs=50.4
Q ss_pred cHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHH
Q psy2870 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 367 (487)
Q Consensus 298 ~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~ 367 (487)
....+..+|+.+|.|+||.|+.+||.. +..+|+.+|.|+||.|+++||..++...++
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~~ 388 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGAALR 388 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 467888999999999999999999942 467899999999999999999999987643
No 81
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.26 E-value=0.0014 Score=54.79 Aligned_cols=69 Identities=19% Similarity=0.336 Sum_probs=49.3
Q ss_pred HHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHH
Q psy2870 337 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFE 416 (487)
Q Consensus 337 kl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~e 416 (487)
.+-.+|+.|-. +.|.+++.||..++..-+... .....+ ...++. +|+..|.|+||.|+|.
T Consensus 9 ~lI~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~---l~~~~d----~~~vd~------------im~~LD~n~Dg~vdF~ 68 (91)
T cd05024 9 KMMLTFHKFAG-EKNYLNRDDLQKLMEKEFSEF---LKNQND----PMAVDK------------IMKDLDDCRDGKVGFQ 68 (91)
T ss_pred HHHHHHHHHcC-CCCcCCHHHHHHHHHHHhHHH---HcCCCC----HHHHHH------------HHHHhCCCCCCcCcHH
Confidence 45568888874 356999999999997642111 001111 234444 9999999999999999
Q ss_pred HHHHHHHHh
Q psy2870 417 DFVKGLSIL 425 (487)
Q Consensus 417 EF~~~l~~l 425 (487)
||..++..+
T Consensus 69 EF~~Lv~~l 77 (91)
T cd05024 69 SFFSLIAGL 77 (91)
T ss_pred HHHHHHHHH
Confidence 999998765
No 82
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.21 E-value=0.003 Score=52.77 Aligned_cols=62 Identities=15% Similarity=0.242 Sum_probs=51.3
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhc-----cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhh
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILC-----RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~-----~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~ 463 (487)
+|..+.. +.+.++..||..+|..-. ....+..+..+++.+|.|+||.|++.||..++..+.-
T Consensus 13 ~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ 79 (91)
T cd05024 13 TFHKFAG-EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLI 79 (91)
T ss_pred HHHHHcC-CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 7888873 456999999999997632 2446778999999999999999999999998887644
No 83
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.08 E-value=0.00063 Score=42.92 Aligned_cols=23 Identities=30% Similarity=0.566 Sum_probs=13.9
Q ss_pred HHHHHHhccCCCCcccHHHHHHH
Q psy2870 435 RWIFCLYDINGDGVISKDDLYNI 457 (487)
Q Consensus 435 ~~iF~~~D~DgDG~Is~eEF~~~ 457 (487)
+.+|..+|.|+||.|+.+||.++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 44566666666666666666553
No 84
>KOG4065|consensus
Probab=97.03 E-value=0.0026 Score=54.82 Aligned_cols=76 Identities=14% Similarity=0.275 Sum_probs=60.2
Q ss_pred hHHHHHHHHHhcccCCCccccHHHHHHHHHHHHH--HhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCC
Q psy2870 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE--LMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTG 411 (487)
Q Consensus 334 ~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~--~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG 411 (487)
+++.--..|++.|.|++|.|+--|+..++..... .-|..+.|-.++..+...++. +++.-|.|+||
T Consensus 65 peqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~------------vL~DdDfN~DG 132 (144)
T KOG4065|consen 65 PEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDA------------VLDDDDFNGDG 132 (144)
T ss_pred HHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHH------------HhcccccCCCc
Confidence 3334446899999999999999999999987654 334545566677777888887 99999999999
Q ss_pred cccHHHHHHH
Q psy2870 412 FLNFEDFVKG 421 (487)
Q Consensus 412 ~Is~eEF~~~ 421 (487)
.|+|-||...
T Consensus 133 ~IDYgEflK~ 142 (144)
T KOG4065|consen 133 VIDYGEFLKR 142 (144)
T ss_pred eeeHHHHHhh
Confidence 9999999864
No 85
>KOG0040|consensus
Probab=97.03 E-value=0.0019 Score=75.26 Aligned_cols=101 Identities=18% Similarity=0.344 Sum_probs=76.8
Q ss_pred HHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHH
Q psy2870 337 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFE 416 (487)
Q Consensus 337 kl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~e 416 (487)
+...+|+.||.+.+|.+++.+|..+++.. |...+ -+........++. ++...|.+.+|+|+..
T Consensus 2254 EFs~~fkhFDkek~G~Ldhq~F~sCLrsl----gY~lp-mvEe~~~~p~fe~------------~ld~vDP~r~G~Vsl~ 2316 (2399)
T KOG0040|consen 2254 EFSMMFKHFDKEKNGRLDHQHFKSCLRSL----GYDLP-MVEEGEPEPEFEE------------ILDLVDPNRDGYVSLQ 2316 (2399)
T ss_pred HHHHHHHHhchhhccCCcHHHHHHHHHhc----CCCCc-ccccCCCChhHHH------------HHHhcCCCCcCcccHH
Confidence 34568999999999999999999999876 33221 1222222334555 9999999999999999
Q ss_pred HHHHHHHHhcc--CChHHHHHHHHHHhccCCCCcccHHHHH
Q psy2870 417 DFVKGLSILCR--GSEEEKLRWIFCLYDINGDGVISKDDLY 455 (487)
Q Consensus 417 EF~~~l~~l~~--~~~~eei~~iF~~~D~DgDG~Is~eEF~ 455 (487)
||+.+|..... ..+.++|+.+|+.+|. +..+|+.++..
T Consensus 2317 dY~afmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~ 2356 (2399)
T KOG0040|consen 2317 DYMAFMISKETENILSSEEIEDAFRALDA-GKPYVTKEELY 2356 (2399)
T ss_pred HHHHHHHhcccccccchHHHHHHHHHhhc-CCccccHHHHH
Confidence 99999876322 3455689999999999 77888888773
No 86
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.97 E-value=0.00084 Score=44.36 Aligned_cols=27 Identities=37% Similarity=0.683 Sum_probs=22.1
Q ss_pred HHHHHHHhcccCCCccccHHHHHHHHH
Q psy2870 337 KLRWIFCLYDINGDGVISKDDLYNIVS 363 (487)
Q Consensus 337 kl~~iF~~~D~DgdG~Is~eEf~~~l~ 363 (487)
+++.+|+.||.|++|+|+.+||..++.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 467888999999999999999888886
No 87
>KOG0040|consensus
Probab=96.94 E-value=0.005 Score=71.85 Aligned_cols=99 Identities=24% Similarity=0.344 Sum_probs=77.1
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhcCC-------ChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccc
Q psy2870 301 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG-------SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYA 373 (487)
Q Consensus 301 ~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~-------~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~ 373 (487)
...-+|+.||++.+|.+++++|..+|+.++.. .++.+++.+..++|++.+|+|+..++..+|-.- ..
T Consensus 2254 EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~------ET 2327 (2399)
T KOG0040|consen 2254 EFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK------ET 2327 (2399)
T ss_pred HHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc------cc
Confidence 44568999999999999999999999988753 345589999999999999999999998887542 00
Q ss_pred cccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHH
Q psy2870 374 YRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422 (487)
Q Consensus 374 ~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l 422 (487)
..-...+.++. +|+.+|. +..+|+.++..+.|
T Consensus 2328 ----eNI~s~~eIE~------------AfraL~a-~~~yvtke~~~~~l 2359 (2399)
T KOG0040|consen 2328 ----ENILSSEEIED------------AFRALDA-GKPYVTKEELYQNL 2359 (2399)
T ss_pred ----ccccchHHHHH------------HHHHhhc-CCccccHHHHHhcC
Confidence 00112235555 9999998 67789998876654
No 88
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.91 E-value=0.00099 Score=42.02 Aligned_cols=22 Identities=32% Similarity=0.549 Sum_probs=11.9
Q ss_pred HHHHHhcccCCCccccHHHHHH
Q psy2870 339 RWIFCLYDINGDGVISKDDLYN 360 (487)
Q Consensus 339 ~~iF~~~D~DgdG~Is~eEf~~ 360 (487)
+.+|+.+|.|+||.|+.+||..
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~ 23 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQR 23 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHH
Confidence 3455555555555555555554
No 89
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.87 E-value=0.0055 Score=52.57 Aligned_cols=69 Identities=17% Similarity=0.226 Sum_probs=57.7
Q ss_pred CcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHH
Q psy2870 297 SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 368 (487)
Q Consensus 297 ~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~ 368 (487)
........+|..+|. ++|.|+-++...++.. .+...+.+..++.+.|.|++|+++.+||.-+|+-+...
T Consensus 7 ~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~--S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~~ 75 (104)
T PF12763_consen 7 EEKQKYDQIFQSLDP-QDGKISGDQAREFFMK--SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLINRK 75 (104)
T ss_dssp CHHHHHHHHHHCTSS-STTEEEHHHHHHHHHH--TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHH--cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHHH
Confidence 455677889999885 6899999999887764 35888999999999999999999999999999877543
No 90
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.81 E-value=0.0039 Score=46.19 Aligned_cols=48 Identities=17% Similarity=0.290 Sum_probs=29.1
Q ss_pred ccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHH
Q psy2870 317 LNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364 (487)
Q Consensus 317 IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~ 364 (487)
++|.|...+|+.+.....+.-+..+|+.+|.+++|.+..+||..+++.
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 566666666666666666666666777777777777777776666554
No 91
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.81 E-value=0.0041 Score=46.07 Aligned_cols=50 Identities=16% Similarity=0.268 Sum_probs=39.7
Q ss_pred cccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHh
Q psy2870 412 FLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 461 (487)
Q Consensus 412 ~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~l 461 (487)
++++.|...+++.+...+.+..+..+|+..|.+++|.+..+||..+++.+
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 37889999999988888888899999999999999999999999888754
No 92
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.68 E-value=0.0087 Score=51.33 Aligned_cols=62 Identities=19% Similarity=0.298 Sum_probs=53.2
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhhh
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 465 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~l 465 (487)
+|...|. ++|.|+-++...++.. .+++.+.+..||...|.|+||+++.+||.-+|.-+...+
T Consensus 15 ~F~~l~~-~~g~isg~~a~~~f~~--S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~~~ 76 (104)
T PF12763_consen 15 IFQSLDP-QDGKISGDQAREFFMK--SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLINRKL 76 (104)
T ss_dssp HHHCTSS-STTEEEHHHHHHHHHH--TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHHHH
T ss_pred HHHhcCC-CCCeEeHHHHHHHHHH--cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHHHh
Confidence 9999985 6899999999998874 478889999999999999999999999998888765544
No 93
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.47 E-value=0.0053 Score=53.44 Aligned_cols=59 Identities=36% Similarity=0.419 Sum_probs=42.8
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHH
Q psy2870 396 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 456 (487)
Q Consensus 396 ~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~ 456 (487)
..+.-.|..+|.|+||.|+..|+..+...+ ...+..+..+|..-|.|+||.|+..|+..
T Consensus 54 ~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 54 RVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 344448999999999999999998775533 44555789999999999999999999875
No 94
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.41 E-value=0.0013 Score=57.18 Aligned_cols=65 Identities=22% Similarity=0.424 Sum_probs=43.0
Q ss_pred CCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCC
Q psy2870 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKT 410 (487)
Q Consensus 331 ~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~D 410 (487)
.......+.|.|..+|.|+||.|+..|+..+...+ ...+..+.. .|+..|.|+|
T Consensus 49 ~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--------------~~~e~C~~~------------F~~~CD~n~d 102 (113)
T PF10591_consen 49 YSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--------------MPPEHCARP------------FFRSCDVNKD 102 (113)
T ss_dssp GGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--------------STTGGGHHH------------HHHHH-TT-S
T ss_pred hhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--------------hhhHHHHHH------------HHHHcCCCCC
Confidence 34566788999999999999999999987665421 011223344 8899999999
Q ss_pred CcccHHHHHHH
Q psy2870 411 GFLNFEDFVKG 421 (487)
Q Consensus 411 G~Is~eEF~~~ 421 (487)
|.|++.|+..+
T Consensus 103 ~~Is~~EW~~C 113 (113)
T PF10591_consen 103 GKISLDEWCNC 113 (113)
T ss_dssp SSEEHHHHHHH
T ss_pred CCCCHHHHccC
Confidence 99999998753
No 95
>KOG0033|consensus
Probab=96.29 E-value=0.002 Score=63.10 Aligned_cols=56 Identities=16% Similarity=0.073 Sum_probs=52.6
Q ss_pred CCCcccccccccCCCCCCCCcchHHHHHHHHHHhhcCCCCCCCCCccccccchhhh
Q psy2870 89 PLGQASTNSASADSSNRDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFIDREF 144 (487)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (487)
+..++.+|.+.++++.|+.++..++|+||.|+..+|.+|+++.|+..|+|+.+++-
T Consensus 220 lye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~ 275 (355)
T KOG0033|consen 220 LYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRER 275 (355)
T ss_pred HHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHH
Confidence 44578899999999999999999999999999999999999999999999998877
No 96
>KOG1029|consensus
Probab=95.92 E-value=0.091 Score=58.34 Aligned_cols=64 Identities=16% Similarity=0.311 Sum_probs=47.7
Q ss_pred HHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccH
Q psy2870 336 EKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNF 415 (487)
Q Consensus 336 ekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~ 415 (487)
-++..+|..+|+..+|++|-..-+.+|... .+ ....+.. |...-|.|+||+++.
T Consensus 195 lKY~QlFNa~DktrsG~Lsg~qaR~aL~qS----------~L----pq~~LA~------------IW~LsDvd~DGkL~~ 248 (1118)
T KOG1029|consen 195 LKYRQLFNALDKTRSGYLSGQQARSALGQS----------GL----PQNQLAH------------IWTLSDVDGDGKLSA 248 (1118)
T ss_pred hHHHHHhhhcccccccccccHHHHHHHHhc----------CC----chhhHhh------------heeeeccCCCCcccH
Confidence 356678999999999999988777766432 11 2223333 888999999999999
Q ss_pred HHHHHHHHHh
Q psy2870 416 EDFVKGLSIL 425 (487)
Q Consensus 416 eEF~~~l~~l 425 (487)
+||+-+|..+
T Consensus 249 dEfilam~li 258 (1118)
T KOG1029|consen 249 DEFILAMHLI 258 (1118)
T ss_pred HHHHHHHHHH
Confidence 9999887653
No 97
>KOG0169|consensus
Probab=95.90 E-value=0.077 Score=59.13 Aligned_cols=136 Identities=21% Similarity=0.330 Sum_probs=106.9
Q ss_pred CcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhccccccc
Q psy2870 297 SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRA 376 (487)
Q Consensus 297 ~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~ 376 (487)
.....+..+|...|++++|.+++.+-..++..+.....+.++..+|+..|..++|.+...++..+..... .
T Consensus 133 ~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~----~----- 203 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELT----K----- 203 (746)
T ss_pred hHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhc----c-----
Confidence 3567888999999999999999999999999999889999999999999999999999999998876641 1
Q ss_pred CChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhcc--CChHHHHHHHHHHhcc----CCCCccc
Q psy2870 377 FDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR--GSEEEKLRWIFCLYDI----NGDGVIS 450 (487)
Q Consensus 377 ~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~--~~~~eei~~iF~~~D~----DgDG~Is 450 (487)
. ..+.. +|..+-.+ .+.++.+++..++..... +.+.+....+++.+.. -..+.++
T Consensus 204 --r----pev~~------------~f~~~s~~-~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ 264 (746)
T KOG0169|consen 204 --R----PEVYF------------LFVQYSHG-KEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLS 264 (746)
T ss_pred --C----chHHH------------HHHHHhCC-CCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccceec
Confidence 1 12333 67666544 789999999999877542 4556666777666633 3456789
Q ss_pred HHHHHHHHHH
Q psy2870 451 KDDLYNIVSS 460 (487)
Q Consensus 451 ~eEF~~~l~~ 460 (487)
++.|..+|..
T Consensus 265 ldgF~~yL~S 274 (746)
T KOG0169|consen 265 LDGFTRYLFS 274 (746)
T ss_pred HHHHHHHhcC
Confidence 9999888875
No 98
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.10 E-value=0.025 Score=34.69 Aligned_cols=26 Identities=31% Similarity=0.640 Sum_probs=14.8
Q ss_pred HHHHHHHhccCCCCcccHHHHHHHHH
Q psy2870 434 LRWIFCLYDINGDGVISKDDLYNIVS 459 (487)
Q Consensus 434 i~~iF~~~D~DgDG~Is~eEF~~~l~ 459 (487)
+..+|+.+|.+++|.|++.||..+++
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 34455555666666666666655554
No 99
>KOG1029|consensus
Probab=95.03 E-value=0.5 Score=52.80 Aligned_cols=67 Identities=25% Similarity=0.418 Sum_probs=55.5
Q ss_pred HHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhh
Q psy2870 396 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 464 (487)
Q Consensus 396 ~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~ 464 (487)
.-.+.+|...|+...|+++=..=+.+|. ..+++...+..|+..-|.|+||.++.+||+-.|.-+-..
T Consensus 195 lKY~QlFNa~DktrsG~Lsg~qaR~aL~--qS~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~liema 261 (1118)
T KOG1029|consen 195 LKYRQLFNALDKTRSGYLSGQQARSALG--QSGLPQNQLAHIWTLSDVDGDGKLSADEFILAMHLIEMA 261 (1118)
T ss_pred hHHHHHhhhcccccccccccHHHHHHHH--hcCCchhhHhhheeeeccCCCCcccHHHHHHHHHHHHHH
Confidence 3345599999999999999888887765 347888899999999999999999999998766654433
No 100
>KOG0615|consensus
Probab=94.39 E-value=0.01 Score=61.98 Aligned_cols=61 Identities=15% Similarity=0.035 Sum_probs=57.0
Q ss_pred ccCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhcCCCCCCCCCccccccchhhh
Q psy2870 84 SADPEPLGQASTNSASADSSNRDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFIDREF 144 (487)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (487)
..+|....|+.+|++.++|..|+..+..+.|||..||+-+|..|.++.++.+|+|+.+..-
T Consensus 385 ~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 385 YTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred cCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 4678888999999999999999999999999999999999999999999999999986654
No 101
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.32 E-value=0.067 Score=32.64 Aligned_cols=25 Identities=28% Similarity=0.527 Sum_probs=15.2
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHH
Q psy2870 303 HYVFNTLDHNKTGFLNFEDFVKGLS 327 (487)
Q Consensus 303 ~~lF~~~D~d~dG~IdfeEF~~~L~ 327 (487)
+.+|+.+|.+++|.|++.+|..++.
T Consensus 3 ~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 3 KEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 4556666666666666666665554
No 102
>KOG3866|consensus
Probab=93.62 E-value=0.39 Score=48.37 Aligned_cols=112 Identities=17% Similarity=0.249 Sum_probs=68.2
Q ss_pred HHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHH
Q psy2870 339 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDF 418 (487)
Q Consensus 339 ~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF 418 (487)
+.+|.++|.|+||+++-.|+..++..-...+=....+ ...+.+. -+. ..+.-.-+++.+|.|.|..|+.+||
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNe--eDDM~Em-eEE-----rlRMREHVMk~vDtNqDRlvtleEF 318 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNE--EDDMKEM-EEE-----RLRMREHVMKQVDTNQDRLVTLEEF 318 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCc--chHHHHH-HHH-----HHHHHHHHHHhcccchhhhhhHHHH
Confidence 4579999999999999999998887654333222111 1111111 110 1112233899999999999999999
Q ss_pred HHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhh
Q psy2870 419 VKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 464 (487)
Q Consensus 419 ~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~ 464 (487)
+..-..-..+.+.+.+.. .+....-+-+|+.++=+.+..+
T Consensus 319 L~~t~~kef~~p~e~WEt------l~q~~~yTeEEL~~fE~e~A~k 358 (442)
T KOG3866|consen 319 LNDTDNKEFNPPKEEWET------LGQKKVYTEEELQQFEREYAQK 358 (442)
T ss_pred HhhhhhcccCCcchhhhh------hcccccccHHHHHHHHHHHHHH
Confidence 988655333333333322 2333456777777776665543
No 103
>KOG4065|consensus
Probab=93.05 E-value=0.3 Score=42.34 Aligned_cols=57 Identities=28% Similarity=0.367 Sum_probs=44.4
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhcc----------CChHHHH----HHHHHHhccCCCCcccHHHHHHH
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILCR----------GSEEEKL----RWIFCLYDINGDGVISKDDLYNI 457 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~~----------~~~~eei----~~iF~~~D~DgDG~Is~eEF~~~ 457 (487)
.|...|.|++|.|+=-|+..++..... ..++.++ ..+.+--|.|+||+|+|.||...
T Consensus 72 YF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 72 YFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 788999999999999999999876432 2344444 44556668999999999999764
No 104
>KOG0169|consensus
Probab=92.83 E-value=1.1 Score=50.38 Aligned_cols=127 Identities=24% Similarity=0.323 Sum_probs=90.7
Q ss_pred HhCCCCCCcccHHHHHHHHHHhcC--------CChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCCh
Q psy2870 308 TLDHNKTGFLNFEDFVKGLSILCR--------GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDS 379 (487)
Q Consensus 308 ~~D~d~dG~IdfeEF~~~L~~l~~--------~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~ 379 (487)
..|...++.=+..-++..+..+.. ...+..+..+|+..|++++|.+++.+...++..+..
T Consensus 100 ~ldl~a~s~~~a~~wV~gl~~l~s~~~~~~~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~------------ 167 (746)
T KOG0169|consen 100 SLDLIANSKEDANIWVSGLRKLISRSKSMRQRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNV------------ 167 (746)
T ss_pred cccccCCCHHHHHHHhhhHHHHHhccchhhhcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHH------------
Confidence 344444554445555555554432 234567778999999999999999999998877521
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q psy2870 380 GMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 459 (487)
Q Consensus 380 ~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~ 459 (487)
..-.. +++++|+..|..+++++...+|+.+........ ++..+|..+-.+ .++++.+++..++.
T Consensus 168 ~l~~~------------~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp---ev~~~f~~~s~~-~~~ls~~~L~~Fl~ 231 (746)
T KOG0169|consen 168 QLSES------------KARRLFKESDNSQTGKLEEEEFVKFRKELTKRP---EVYFLFVQYSHG-KEYLSTDDLLRFLE 231 (746)
T ss_pred hhhHH------------HHHHHHHHHHhhccceehHHHHHHHHHhhccCc---hHHHHHHHHhCC-CCccCHHHHHHHHH
Confidence 11222 344488888888999999999999987654333 688888887544 88999999999888
Q ss_pred Hhh
Q psy2870 460 SVY 462 (487)
Q Consensus 460 ~lg 462 (487)
...
T Consensus 232 ~~q 234 (746)
T KOG0169|consen 232 EEQ 234 (746)
T ss_pred Hhc
Confidence 773
No 105
>KOG0032|consensus
Probab=92.52 E-value=0.052 Score=57.16 Aligned_cols=51 Identities=12% Similarity=0.016 Sum_probs=47.7
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHhhcCCCCCCCCCccccccchh
Q psy2870 92 QASTNSASADSSNRDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFIDR 142 (487)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (487)
.+..+.+.|..+.|+..+..++|||+.++..+|..|.++.++.+|+|+...
T Consensus 249 ~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 249 AILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred HHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 677788899999999999999999999999999999999999999998754
No 106
>KOG0599|consensus
Probab=92.48 E-value=0.027 Score=56.18 Aligned_cols=51 Identities=18% Similarity=0.081 Sum_probs=47.7
Q ss_pred CCcccccccccCCCCCCCCcchHHHHHHHHHHhhcCCCCCCCCCccccccc
Q psy2870 90 LGQASTNSASADSSNRDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFI 140 (487)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (487)
|+-+..|.+.|.+++|+..+.+++|+|+.++|.+|.+|+++.++..|++++
T Consensus 237 LR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 237 LRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred HHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 455678999999999999999999999999999999999999999999984
No 107
>KOG0046|consensus
Probab=92.26 E-value=0.36 Score=51.86 Aligned_cols=67 Identities=18% Similarity=0.239 Sum_probs=51.0
Q ss_pred HHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHH
Q psy2870 337 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFE 416 (487)
Q Consensus 337 kl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~e 416 (487)
.++..|...| |++|+|+..|+..++...... .....+++++. ++...+.|.+|.|+|+
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~---------~g~~~~eei~~------------~l~~~~~~~~g~v~fe 77 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLP---------LGYFVREEIKE------------ILGEVGVDADGRVEFE 77 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhccc---------ccchhHHHHHH------------HHhccCCCcCCccCHH
Confidence 4567788888 899999999999888875221 12234556666 8889999999999999
Q ss_pred HHHHHHHHh
Q psy2870 417 DFVKGLSIL 425 (487)
Q Consensus 417 EF~~~l~~l 425 (487)
||+.++..+
T Consensus 78 ~f~~~~~~l 86 (627)
T KOG0046|consen 78 EFVGIFLNL 86 (627)
T ss_pred HHHHHHHhh
Confidence 999976554
No 108
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=92.05 E-value=1.3 Score=41.27 Aligned_cols=104 Identities=21% Similarity=0.238 Sum_probs=65.7
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhcCC------------------------------------------------
Q psy2870 301 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG------------------------------------------------ 332 (487)
Q Consensus 301 ~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~------------------------------------------------ 332 (487)
.+++=...||.|+||.|..-|=..+++.++.+
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~Y 87 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGAY 87 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcccc
Confidence 45555677999999999877766555544210
Q ss_pred -----ChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCC
Q psy2870 333 -----SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDH 407 (487)
Q Consensus 333 -----~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~ 407 (487)
...++.+.+|..|+..+.+.+|..|+..++..-- ....... ... ...+|..++... .
T Consensus 88 D~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr-----~~~D~~G--W~a----------~~~EW~~~y~L~-~ 149 (174)
T PF05042_consen 88 DTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNR-----NANDPFG--WFA----------AFFEWGALYILA-K 149 (174)
T ss_pred ccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhcc-----ccCCcch--hhh----------hhhHHHHHHHHH-c
Confidence 1357899999999998889999999998887521 0000000 011 111233244443 5
Q ss_pred CCCCcccHHHHHHHH
Q psy2870 408 NKTGFLNFEDFVKGL 422 (487)
Q Consensus 408 D~DG~Is~eEF~~~l 422 (487)
+.||.+..++.+.++
T Consensus 150 d~dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 150 DKDGFLSKEDIRGVY 164 (174)
T ss_pred CcCCcEeHHHHhhhc
Confidence 678899888877664
No 109
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=91.87 E-value=0.41 Score=38.73 Aligned_cols=61 Identities=11% Similarity=0.193 Sum_probs=50.4
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHHHhcc--CChHHHHHHHHHHhccC----CCCcccHHHHHHHHHHh
Q psy2870 400 YVFNTLDHNKTGFLNFEDFVKGLSILCR--GSEEEKLRWIFCLYDIN----GDGVISKDDLYNIVSSV 461 (487)
Q Consensus 400 ~lF~~~D~D~DG~Is~eEF~~~l~~l~~--~~~~eei~~iF~~~D~D----gDG~Is~eEF~~~l~~l 461 (487)
.+|..+-. +.+.|+.++|..+|..... ..+.+.+..++..+..+ ..+.+++++|..+|..-
T Consensus 4 ~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 4 EIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred HHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 38999965 7889999999999987544 35788899999998655 47999999999999753
No 110
>KOG0046|consensus
Probab=91.56 E-value=0.63 Score=50.02 Aligned_cols=63 Identities=16% Similarity=0.285 Sum_probs=54.3
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhccC---ChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhh
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILCRG---SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 464 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~~~---~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~ 464 (487)
-|..+| |++|+|+..|+..++...... ...++++.+....+.|.+|.|+++||..++..+..+
T Consensus 24 kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s~ 89 (627)
T KOG0046|consen 24 KFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLKSK 89 (627)
T ss_pred HHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhhh
Confidence 788999 999999999999999875442 357889999999999999999999999988776544
No 111
>KOG0998|consensus
Probab=91.43 E-value=0.19 Score=58.21 Aligned_cols=60 Identities=18% Similarity=0.310 Sum_probs=52.4
Q ss_pred HHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHh
Q psy2870 400 YVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 461 (487)
Q Consensus 400 ~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~l 461 (487)
.+|...|.+.+|.|+..+++..+.. .++....+..++...|.++.|.|++.+|.-.+-.+
T Consensus 287 ~if~q~d~~~dG~I~s~~~~~~f~~--~gl~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~ 346 (847)
T KOG0998|consen 287 KIFSQVDKDNDGSISSNEARNIFLP--FGLSKPRLAHVWLLADTQNTGTLSKDEFALAMHLL 346 (847)
T ss_pred HHHHhccccCCCccccccccccccc--CCCChhhhhhhhhhcchhccCcccccccchhhhhh
Confidence 3999999999999999999998875 57888899999999999999999999886655443
No 112
>KOG4578|consensus
Probab=90.65 E-value=0.12 Score=52.27 Aligned_cols=67 Identities=16% Similarity=0.283 Sum_probs=52.4
Q ss_pred HHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCccc
Q psy2870 335 EEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLN 414 (487)
Q Consensus 335 eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is 414 (487)
+..+.|.|..+|.|+++.|.+.|+..+=.-+ .....++.-.++ +|+..|.|+|..|+
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l-----------~k~s~~rkC~rk------------~~~yCDlNkDKkIS 388 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREWKPFKRVL-----------LKKSKPRKCSRK------------FFKYCDLNKDKKIS 388 (421)
T ss_pred hheeeeeeeeecccccCccchhhcchHHHHH-----------HhhccHHHHhhh------------cchhcccCCCceec
Confidence 3467899999999999999999987654332 122334555555 99999999999999
Q ss_pred HHHHHHHHHH
Q psy2870 415 FEDFVKGLSI 424 (487)
Q Consensus 415 ~eEF~~~l~~ 424 (487)
++|++.++..
T Consensus 389 l~Ew~~CL~~ 398 (421)
T KOG4578|consen 389 LDEWRGCLGV 398 (421)
T ss_pred HHHHhhhhcc
Confidence 9999998864
No 113
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=89.59 E-value=2.4 Score=39.57 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=43.8
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHhcc-------CChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q psy2870 398 AHYVFNTLDHNKTGFLNFEDFVKGLSILCR-------GSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 459 (487)
Q Consensus 398 ~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~-------~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~ 459 (487)
.+.+|.++++.+.+.|++.|+.++++.-.. ....-+...++... .+.||.+..+..+.++.
T Consensus 98 Fe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vYD 165 (174)
T PF05042_consen 98 FEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVYD 165 (174)
T ss_pred HHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhcc
Confidence 344999999988899999999999876221 12233444455554 67899999999877654
No 114
>KOG3555|consensus
Probab=88.40 E-value=0.63 Score=47.58 Aligned_cols=107 Identities=15% Similarity=0.185 Sum_probs=71.9
Q ss_pred cCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhc---CCChHHHHHHHHHhcccCCCccccH
Q psy2870 279 IRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC---RGSEEEKLRWIFCLYDINGDGVISK 355 (487)
Q Consensus 279 Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~---~~~~eekl~~iF~~~D~DgdG~Is~ 355 (487)
-+..||..+-+. +..-|+.+-.+.++...-......-+.+. ...-...+.|+|..+|.|.||.|+.
T Consensus 201 Ct~qeL~~lg~R-----------L~dWF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~ 269 (434)
T KOG3555|consen 201 CTDQELRRLGNR-----------LRDWFKALHEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQ 269 (434)
T ss_pred CCHHHHHHHHHH-----------HHHHHHHHHhhhhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCH
Confidence 455666654433 34556666556555444333332222221 1245678999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q psy2870 356 DDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424 (487)
Q Consensus 356 eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~ 424 (487)
.|+..+... .-+.-++- .|...|...||.|+-.|+..++..
T Consensus 270 sEl~~I~ld----------------knE~Cikp------------FfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 270 SELRAIELD----------------KNEACIKP------------FFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred HHhhhhhcc----------------CchhHHHH------------HHhhhcccccCccccchhhhhhcc
Confidence 999876532 12334444 999999999999999999998765
No 115
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=88.35 E-value=1.3 Score=35.79 Aligned_cols=62 Identities=11% Similarity=0.204 Sum_probs=51.0
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhcCC--ChHHHHHHHHHhcccC----CCccccHHHHHHHHHH
Q psy2870 302 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRG--SEEEKLRWIFCLYDIN----GDGVISKDDLYNIVSS 364 (487)
Q Consensus 302 l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~--~~eekl~~iF~~~D~D----gdG~Is~eEf~~~l~~ 364 (487)
+..+|..+-. +.+.|+.++|...|...... ...+.++.++..|..+ ..+.+|.++|..+|..
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 5678999955 78999999999999877654 4688899999998665 4799999999999854
No 116
>KOG4347|consensus
Probab=87.61 E-value=0.72 Score=50.80 Aligned_cols=59 Identities=36% Similarity=0.611 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHH
Q psy2870 395 QRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454 (487)
Q Consensus 395 ~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF 454 (487)
..+++++|+..|.+.+|.|+|.+++.++..+..+.-.+.+.-+|+.+|.+++ ..+.+|.
T Consensus 554 ~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 554 LIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 5678889999999999999999999999999888888999999999999999 8877775
No 117
>KOG0604|consensus
Probab=86.99 E-value=0.18 Score=50.99 Aligned_cols=72 Identities=14% Similarity=0.135 Sum_probs=61.3
Q ss_pred cchhhhhccccccccccCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhcCCCCCCCCCccccccchhhh
Q psy2870 69 EYPEFIDQNKNFRIVSADPEPLGQASTNSASADSSNRDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFIDREF 144 (487)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (487)
-||.|..+.- +.--|--...+.+|.+.|-.++|+-++.+++|+||.||...|..|.+-.++..|+|+...+.
T Consensus 259 GyPPFYS~hg----~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~ 330 (400)
T KOG0604|consen 259 GYPPFYSNHG----LAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA 330 (400)
T ss_pred CCCcccccCC----ccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence 4888876543 33345666789999999999999999999999999999999999999999999999976554
No 118
>KOG3555|consensus
Probab=86.72 E-value=0.64 Score=47.52 Aligned_cols=58 Identities=22% Similarity=0.224 Sum_probs=51.2
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhh
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 462 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg 462 (487)
||..+|.|.||.|+..|+..+ ...-.+..|+.+|..-|...||.|+-+|+...+..-.
T Consensus 255 MFnklD~N~Dl~Ld~sEl~~I----~ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 255 MFNKLDTNYDLLLDQSELRAI----ELDKNEACIKPFFNSCDTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred hhhccccccccccCHHHhhhh----hccCchhHHHHHHhhhcccccCccccchhhhhhccCC
Confidence 999999999999999998876 4455678899999999999999999999998887643
No 119
>KOG4578|consensus
Probab=85.66 E-value=0.62 Score=47.33 Aligned_cols=66 Identities=24% Similarity=0.306 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcC-CChHHHHHHHHHhcccCCCccccHHHHHHHHHH
Q psy2870 299 YRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364 (487)
Q Consensus 299 ~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~-~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~ 364 (487)
+..++--|..+|+|+++.|+-.|+.-+-+.+.. .....-.+.+|+..|.|+|..|+..|+...|..
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred hheeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 346667899999999999999997766555543 244556688999999999999999999887754
No 120
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=85.17 E-value=1.2 Score=40.07 Aligned_cols=80 Identities=16% Similarity=0.370 Sum_probs=48.4
Q ss_pred CCCCCCChHHHHHHHHhCCCCHHHHHHHHHHHhhcCCCCCccHHHHHHHHhhhcCCCCcccccccccccCCCCCCcccch
Q psy2870 174 IDSPRYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAECPTGTIRQD 253 (487)
Q Consensus 174 ~~~~~l~~~~l~~l~~~t~fs~~ei~~L~~~F~~l~~~G~i~~~~F~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~i~~d 253 (487)
..+..|+|++..+|++-...|.+.++.+...|.. +|.+ .++
T Consensus 3 ~~~~~lsp~eF~qLq~y~eys~kklkdvl~eF~~---~g~~---------~~~--------------------------- 43 (138)
T PF14513_consen 3 KEWVSLSPEEFAQLQKYSEYSTKKLKDVLKEFHG---DGSL---------AKY--------------------------- 43 (138)
T ss_dssp ---S-S-HHHHHHHHHHHHH----HHHHHHHH-H---TSGG---------GGG---------------------------
T ss_pred cceeccCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCcc---------ccc---------------------------
Confidence 4567899999999999999999999999888865 3421 111
Q ss_pred hhhhhhhhccCCCCcccccCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCC
Q psy2870 254 TFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNK 313 (487)
Q Consensus 254 ~~~~~~~~~~~~~~~~l~~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~ 313 (487)
++.+.|+.+.|+.+|..+.... .+.+++.++|..|-...
T Consensus 44 --------------------~~~~~Id~egF~~Fm~~yLe~d-~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 44 --------------------NPEEPIDYEGFKLFMKTYLEVD-LPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp --------------------EETTEE-HHHHHHHHHHHTT-S---HHHHHHHHHHS----
T ss_pred --------------------CCCCCcCHHHHHHHHHHHHcCC-CCHHHHHHHHHHHhCcc
Confidence 1236788999999998887653 68899999999986544
No 121
>KOG1955|consensus
Probab=81.03 E-value=3.1 Score=44.53 Aligned_cols=69 Identities=19% Similarity=0.254 Sum_probs=55.4
Q ss_pred hHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhh
Q psy2870 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 464 (487)
Q Consensus 394 ~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~ 464 (487)
+++|...-|+.+-.|-.|.|+-.--++++.+ ..+.-.++..||..-|.|.||.+++.||+.++.-+-..
T Consensus 229 QReYYvnQFrtvQpDp~gfisGsaAknFFtK--Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVaR 297 (737)
T KOG1955|consen 229 QREYYVNQFRTVQPDPHGFISGSAAKNFFTK--SKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVAR 297 (737)
T ss_pred HHHHHHhhhhcccCCcccccccHHHHhhhhh--ccCchHHHHHHHhhcccCccccccHHHHHhhHhheeec
Confidence 3445555899999999999998777777654 35667889999999999999999999999988765443
No 122
>KOG4286|consensus
Probab=79.32 E-value=14 Score=41.76 Aligned_cols=111 Identities=15% Similarity=0.215 Sum_probs=75.7
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCCh
Q psy2870 300 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDS 379 (487)
Q Consensus 300 ~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~ 379 (487)
.-+.-+++.||...+|.|..-+|..++..++....+++++.+|+.+-.++...+ ...|..++..+.....
T Consensus 470 ~~lN~llNvyD~~R~g~irvls~ki~~i~lck~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dliqipr--------- 539 (966)
T KOG4286|consen 470 MCLNWLLNVYDTGRTGRIRVLSFKIGIISLCKAHLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDLIQIPR--------- 539 (966)
T ss_pred HHHHHHHHhcccCCCcceEEeeehhhHHHHhcchhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHHHHHHH---------
Confidence 445668899999999999999999999999999999999999999987777655 6666666655432110
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q psy2870 380 GMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424 (487)
Q Consensus 380 ~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~ 424 (487)
.-.++......+...-++..|.. .++--.|++..|...+..
T Consensus 540 --~lGE~aAfGgsNvepsvrsCF~~--v~~~pei~~~~f~dw~~~ 580 (966)
T KOG4286|consen 540 --QLGEVAAFGGSNIEPSVRSCFQF--VNNKPEIEAALFLDWMRL 580 (966)
T ss_pred --HHhHHHhhcCCCCChHHHHHHHh--cCCCCcchHHHHHHHhcc
Confidence 00111111222223334447773 345567888888887653
No 123
>PLN02952 phosphoinositide phospholipase C
Probab=79.06 E-value=14 Score=41.36 Aligned_cols=52 Identities=15% Similarity=0.294 Sum_probs=39.1
Q ss_pred CCCcccHHHHHHHHHHhcC--CChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 313 KTGFLNFEDFVKGLSILCR--GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 313 ~dG~IdfeEF~~~L~~l~~--~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
+.|.++|++|..+.+.+.. .....++..+|..|-.+ .+.++.++|..+|...
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~-~~~mt~~~l~~FL~~~ 66 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVG-GGHMGADQLRRFLVLH 66 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCC-CCccCHHHHHHHHHHh
Confidence 4688999999877776642 23667888889888543 3679999999888764
No 124
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=78.07 E-value=14 Score=30.87 Aligned_cols=71 Identities=20% Similarity=0.376 Sum_probs=43.2
Q ss_pred HHHHHHHHHhcccCCCccccHHHHHHHHHHHHHH---hcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCC
Q psy2870 335 EEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL---MGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTG 411 (487)
Q Consensus 335 eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~---~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG 411 (487)
.+|++.+|+.+ .|++|.++...|..++..+... +|... ...-++..++. .|... ....
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~----aFg~~e~sv~s------------CF~~~--~~~~ 62 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGP----AFGYIEPSVRS------------CFQQV--QLSP 62 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GG----GGT--HHHHHH------------HHHHT--TT-S
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccc----cccCcHHHHHH------------Hhccc--CCCC
Confidence 57899999999 7889999999999999887532 22211 11113444444 77775 2456
Q ss_pred cccHHHHHHHHHH
Q psy2870 412 FLNFEDFVKGLSI 424 (487)
Q Consensus 412 ~Is~eEF~~~l~~ 424 (487)
.|+.++|+..|..
T Consensus 63 ~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 63 KITENQFLDWLMS 75 (90)
T ss_dssp -B-HHHHHHHHHT
T ss_pred ccCHHHHHHHHHh
Confidence 7999999988764
No 125
>KOG1955|consensus
Probab=77.37 E-value=4.5 Score=43.39 Aligned_cols=66 Identities=20% Similarity=0.251 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHH
Q psy2870 299 YRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366 (487)
Q Consensus 299 ~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~ 366 (487)
.+++-.-|+.+-.|-+|.|+=.--..++.+- ....+++..++.+.|.|+||-|+..||+.++..+.
T Consensus 230 ReYYvnQFrtvQpDp~gfisGsaAknFFtKS--klpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVV 295 (737)
T KOG1955|consen 230 REYYVNQFRTVQPDPHGFISGSAAKNFFTKS--KLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVV 295 (737)
T ss_pred HHHHHhhhhcccCCcccccccHHHHhhhhhc--cCchHHHHHHHhhcccCccccccHHHHHhhHhhee
Confidence 4566667888888999999866555555432 36678899999999999999999999999998653
No 126
>PLN02952 phosphoinositide phospholipase C
Probab=73.22 E-value=24 Score=39.42 Aligned_cols=87 Identities=13% Similarity=0.103 Sum_probs=62.3
Q ss_pred CCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCC--ChHHHHHHHHHhc----c---
Q psy2870 276 TGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG--SEEEKLRWIFCLY----D--- 346 (487)
Q Consensus 276 sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~--~~eekl~~iF~~~----D--- 346 (487)
.|.++.++|..+...+-.........+..+|..+-. +++.++.++|..+|...... ...+.+..++..+ .
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~ 92 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVT 92 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccc
Confidence 489999999888887754333467899999999965 44689999999999887753 3445555555432 1
Q ss_pred cCCCccccHHHHHHHHH
Q psy2870 347 INGDGVISKDDLYNIVS 363 (487)
Q Consensus 347 ~DgdG~Is~eEf~~~l~ 363 (487)
..+.+.++.+.|..+|.
T Consensus 93 ~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 93 RYTRHGLNLDDFFHFLL 109 (599)
T ss_pred cccccCcCHHHHHHHHc
Confidence 12334689999998885
No 127
>KOG1707|consensus
Probab=72.18 E-value=9.5 Score=42.04 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=28.0
Q ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHHhhhh
Q psy2870 433 KLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 464 (487)
Q Consensus 433 ei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~ 464 (487)
-+..+|..+|.|+||.++..|+...+...+..
T Consensus 316 Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~ 347 (625)
T KOG1707|consen 316 FLVDVFEKFDRDNDGALSPEELKDLFSTAPGS 347 (625)
T ss_pred HHHHHHHhccCCCCCCcCHHHHHHHhhhCCCC
Confidence 47788999999999999999999998877654
No 128
>KOG0039|consensus
Probab=69.23 E-value=10 Score=42.97 Aligned_cols=88 Identities=24% Similarity=0.444 Sum_probs=65.6
Q ss_pred CCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhh
Q psy2870 314 TGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393 (487)
Q Consensus 314 dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~ 393 (487)
+| |+++||. ......+.+++.+|.++|. ++|.++.+++..++........ . ......
T Consensus 2 ~~-~~~~~~~-----~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~------------ 58 (646)
T KOG0039|consen 2 EG-ISFQELK-----ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANW-L---SLIKKQ------------ 58 (646)
T ss_pred CC-cchhhhc-----ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhh-h---hhhhhh------------
Confidence 56 8999998 5567889999999999998 9999999999999887643222 1 011112
Q ss_pred hHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q psy2870 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424 (487)
Q Consensus 394 ~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~ 424 (487)
...+...++...|.+..|.+..+++..++..
T Consensus 59 ~~~~~~~~~~~~~~~~~~y~~~~~~~~ll~~ 89 (646)
T KOG0039|consen 59 TEEYAALIMEELDPDHKGYITNEDLEILLLQ 89 (646)
T ss_pred hhHHHHHhhhhccccccceeeecchhHHHHh
Confidence 2234444999999999999998888877653
No 129
>KOG0610|consensus
Probab=68.83 E-value=2.3 Score=44.95 Aligned_cols=55 Identities=16% Similarity=0.123 Sum_probs=43.9
Q ss_pred ccCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhcCCCCC----CCCCccccccc
Q psy2870 84 SADPEPLGQASTNSASADSSNRDAPFGTFTNFIRSVWQKMSGSVSN----SSEQEEYPEFI 140 (487)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 140 (487)
++..+.+..|+.+...|--.. .++.+++|+||.||+|+|..|++ +.+.-+|+-+.
T Consensus 338 ~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~ 396 (459)
T KOG0610|consen 338 SNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFE 396 (459)
T ss_pred CCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHhhcCcccc
Confidence 466778888888888873332 78899999999999999999999 77777776654
No 130
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=63.98 E-value=30 Score=31.69 Aligned_cols=66 Identities=14% Similarity=0.195 Sum_probs=49.7
Q ss_pred HHhhCCCCCCcccHHHHHHHHHHhc---cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhhhcc
Q psy2870 402 FNTLDHNKTGFLNFEDFVKGLSILC---RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGT 467 (487)
Q Consensus 402 F~~~D~D~DG~Is~eEF~~~l~~l~---~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~l~~ 467 (487)
|..+...+...|+-..|..+|+..+ ..++...+..+|..+-..+...|++++|..+|..+......
T Consensus 8 f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~~~~ 76 (154)
T PF05517_consen 8 FASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEKKGK 76 (154)
T ss_dssp HHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHHHSC
T ss_pred HHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhhc
Confidence 3333445566899999999998843 36788899999999866666789999999999998887654
No 131
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=63.61 E-value=86 Score=27.78 Aligned_cols=104 Identities=16% Similarity=0.242 Sum_probs=55.4
Q ss_pred cccHHHHHHHHHHh--c-----CCChHHHHHHHHHhcccCC--CccccHHHHHHHHHHHHHHhcccccccCChhhHHHHH
Q psy2870 316 FLNFEDFVKGLSIL--C-----RGSEEEKLRWIFCLYDING--DGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRV 386 (487)
Q Consensus 316 ~IdfeEF~~~L~~l--~-----~~~~eekl~~iF~~~D~Dg--dG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v 386 (487)
.|-|.-|..+++.- . .-..-..+..+|+....+. |..|+..++..++..+|.......+...... ..
T Consensus 14 ~IrfsaYRtA~KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~--~~-- 89 (127)
T PF09068_consen 14 NIRFSAYRTAMKLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIP--SR-- 89 (127)
T ss_dssp T-SSHHHHHHHHHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH------
T ss_pred hHHHHHhHHHHHHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC--ch--
Confidence 46666676665422 1 1233455667777766554 4679999999999999854432211111100 00
Q ss_pred HHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHh
Q psy2870 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 425 (487)
Q Consensus 387 ~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l 425 (487)
......+..+.-++..+|.++.|.|+.-.|..++..+
T Consensus 90 --~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~KvaL~~L 126 (127)
T PF09068_consen 90 --PVDLAVDLLLNWLLNVYDSQRTGKIRVLSFKVALITL 126 (127)
T ss_dssp -----HHHHHHHHHHHHHH-TT--SEEEHHHHHHHHHHT
T ss_pred --hHHHHHHHHHHHHHHHhCCCCCCeeehhHHHHHHHHh
Confidence 0011222334448889999999999999998887654
No 132
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=63.46 E-value=33 Score=28.66 Aligned_cols=62 Identities=16% Similarity=0.193 Sum_probs=40.5
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHhcc-----------CChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhh
Q psy2870 398 AHYVFNTLDHNKTGFLNFEDFVKGLSILCR-----------GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 462 (487)
Q Consensus 398 ~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~-----------~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg 462 (487)
.+++|..+ .|.+|.++..-|..++..+.. +-.+..++..|... ...-.|+.++|..++..-.
T Consensus 5 yRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~eP 77 (90)
T PF09069_consen 5 YRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMSEP 77 (90)
T ss_dssp HHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT--
T ss_pred HHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHhCC
Confidence 45589988 688999999999888876421 33566788888875 3566799999999998653
No 133
>KOG0607|consensus
Probab=61.79 E-value=2.9 Score=42.94 Aligned_cols=49 Identities=4% Similarity=-0.046 Sum_probs=45.9
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHhhcCCCCCCCCCccccccc
Q psy2870 92 QASTNSASADSSNRDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFI 140 (487)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (487)
.+.-|.+.|-..+|...+..++|+|+.|++.++.+|..+-.+.+|+|+.
T Consensus 317 sIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~ 365 (463)
T KOG0607|consen 317 SIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQ 365 (463)
T ss_pred HHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccc
Confidence 3467999999999999999999999999999999999999999999975
No 134
>KOG3866|consensus
Probab=59.61 E-value=15 Score=37.41 Aligned_cols=59 Identities=22% Similarity=0.314 Sum_probs=43.5
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhc----c-CCh--------HHH---HHHHHHHhccCCCCcccHHHHHHHHH
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILC----R-GSE--------EEK---LRWIFCLYDINGDGVISKDDLYNIVS 459 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~----~-~~~--------~ee---i~~iF~~~D~DgDG~Is~eEF~~~l~ 459 (487)
.|...|.|+||.++-.|+..++..-. . .-. ++. -..+++.+|.|.|..|+.+||...-.
T Consensus 249 FF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~ 323 (442)
T KOG3866|consen 249 FFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTD 323 (442)
T ss_pred heeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhh
Confidence 78899999999999999888775422 1 111 111 23468899999999999999976544
No 135
>KOG1265|consensus
Probab=58.71 E-value=1.3e+02 Score=35.27 Aligned_cols=103 Identities=18% Similarity=0.296 Sum_probs=73.1
Q ss_pred hhhhhhccCCCCcccccCC-CCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCC--
Q psy2870 256 KGIYAKFFPCGSTYLKAEC-PTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG-- 332 (487)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~~-~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~-- 332 (487)
+.+...+.-|++|.-+.+. .-...+.+.|..++..+++ ...++.+|..+-.++.-+++.+++..+|..-.+.
T Consensus 181 KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klcp-----R~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpR 255 (1189)
T KOG1265|consen 181 KRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLCP-----RPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPR 255 (1189)
T ss_pred hHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcCC-----chhHHHHHHHhccCCCccccHHHHHHHHhhhccCcc
Confidence 3344444444444432111 1134677888999999864 4678999999998888999999999999765542
Q ss_pred --------ChHHHHHHHHHhcccCC----CccccHHHHHHHHH
Q psy2870 333 --------SEEEKLRWIFCLYDING----DGVISKDDLYNIVS 363 (487)
Q Consensus 333 --------~~eekl~~iF~~~D~Dg----dG~Is~eEf~~~l~ 363 (487)
....+++.+...|..|+ .|.++.+-|...+.
T Consensus 256 LNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~ 298 (1189)
T KOG1265|consen 256 LNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLM 298 (1189)
T ss_pred hhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhh
Confidence 45678888888887765 68899888887764
No 136
>KOG0042|consensus
Probab=58.04 E-value=19 Score=39.70 Aligned_cols=65 Identities=22% Similarity=0.276 Sum_probs=58.4
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhh
Q psy2870 398 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 462 (487)
Q Consensus 398 ~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg 462 (487)
.+..|..+|.|+.|.++.++.++.|+....+.+++.+.++....|.+.+|.+...||.+++..+-
T Consensus 595 ~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 595 RKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 33479999999999999999999999988889999999999999999999999999999887543
No 137
>KOG1707|consensus
Probab=57.07 E-value=39 Score=37.41 Aligned_cols=154 Identities=12% Similarity=0.096 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHH-HhcCCChHHHHHHHHHhcccC-----CCccccHHHHHHHHHHHHHHhccc
Q psy2870 299 YRYAHYVFNTLDHNKTGFLNFEDFVKGLS-ILCRGSEEEKLRWIFCLYDIN-----GDGVISKDDLYNIVSSVYELMGTY 372 (487)
Q Consensus 299 ~~~l~~lF~~~D~d~dG~IdfeEF~~~L~-~l~~~~~eekl~~iF~~~D~D-----gdG~Is~eEf~~~l~~l~~~~g~~ 372 (487)
...+.++|+..|.|.||.++=.|....=. .++.......+..+-...+.. .++.++..-|..+-. ++-..|.+
T Consensus 194 v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~-lfiergr~ 272 (625)
T KOG1707|consen 194 VKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNT-LFIERGRH 272 (625)
T ss_pred HHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHH-HHHHhccc
Confidence 45678899999999999999888754422 233333333333333332221 123344444443222 11111111
Q ss_pred -------------ccccCChhhHHHHHHH----Hh--hhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHhccCC----
Q psy2870 373 -------------AYRAFDSGMVAQRVEY----LF--QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGS---- 429 (487)
Q Consensus 373 -------------~~~~~~~~~~~~~v~~----l~--~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~~~---- 429 (487)
...+++.+.+...+.. .. .-..-.++..+|..+|.|+||.++-+|+..+........
T Consensus 273 EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~ 352 (625)
T KOG1707|consen 273 ETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSS 352 (625)
T ss_pred cchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCC
Confidence 0011111111000000 00 111246778899999999999999999999987754321
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q psy2870 430 EEEKLRWIFCLYDINGDGVISKDDLYNIVS 459 (487)
Q Consensus 430 ~~eei~~iF~~~D~DgDG~Is~eEF~~~l~ 459 (487)
...+.. -.+..|.++++-|...+.
T Consensus 353 ~~~~~t------~~~~~G~ltl~g~l~~Ws 376 (625)
T KOG1707|consen 353 PYKDST------VKNERGWLTLNGFLSQWS 376 (625)
T ss_pred cccccc------eecccceeehhhHHHHHH
Confidence 111000 123678888888765443
No 138
>KOG0035|consensus
Probab=56.93 E-value=48 Score=38.61 Aligned_cols=102 Identities=15% Similarity=0.092 Sum_probs=72.7
Q ss_pred HHHHHHHHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCccc
Q psy2870 335 EEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLN 414 (487)
Q Consensus 335 eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is 414 (487)
..+++.+|..+|....|.++.++|...+..+ |.... ..+.... .|.++....|.+.-|.++
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~~~~~Lmsl----g~~~e---~ee~~~~------------e~~~lvn~~n~l~~~qv~ 806 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEELLRCLMSL----GYNTE---EEEQGIA------------EWFRLVNKKNPLIQGQVQ 806 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHHHHHHHHhc----Ccccc---hhHHHHH------------HHHHHHhccCccccccee
Confidence 3577889999999999999999999988764 33211 0111222 233388888888889999
Q ss_pred HHHHHHHHHHhccC-ChHHHHHHHHHHhccCCCCcccHHHHHH
Q psy2870 415 FEDFVKGLSILCRG-SEEEKLRWIFCLYDINGDGVISKDDLYN 456 (487)
Q Consensus 415 ~eEF~~~l~~l~~~-~~~eei~~iF~~~D~DgDG~Is~eEF~~ 456 (487)
+.+|...|.+-... .....+...|+.+-++.. +|..+|+..
T Consensus 807 ~~e~~ddl~R~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 807 LLEFEDDLEREYEDLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred HHHHHhHhhhhhhhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 99999999875443 344556677777755555 788898877
No 139
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=54.75 E-value=63 Score=28.63 Aligned_cols=27 Identities=7% Similarity=0.217 Sum_probs=22.0
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHhhcC
Q psy2870 183 SIEALCRATKFSEAEIKKIYRNFKAEC 209 (487)
Q Consensus 183 ~l~~l~~~t~fs~~ei~~L~~~F~~l~ 209 (487)
-++.+|+.+.++.-++..+.+.|+...
T Consensus 25 KLR~lQk~~~l~lv~l~~v~~~f~~~~ 51 (127)
T PF09068_consen 25 KLRFLQKRLCLDLVDLSNVIEAFREHG 51 (127)
T ss_dssp HHHHHHHHTTGGG--HHHHHHHHHHTT
T ss_pred HHHHHHHHHhheeeeHHHHHHHHHHcC
Confidence 688999999999999999999998853
No 140
>KOG2243|consensus
Probab=53.13 E-value=21 Score=42.91 Aligned_cols=59 Identities=12% Similarity=0.322 Sum_probs=50.8
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHH
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~ 460 (487)
.|+.+|.||.|.|+..+|..+|.. ...-++.++..+......|.+...++++|..-+..
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~-~k~ytqse~dfllscae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEG-HKHYTQSEIDFLLSCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhc-cccchhHHHHHHHHhhccCccccccHHHHHHHhcC
Confidence 588899999999999999999875 34567788999999999999999999999876554
No 141
>KOG2243|consensus
Probab=51.55 E-value=21 Score=42.96 Aligned_cols=58 Identities=22% Similarity=0.540 Sum_probs=42.2
Q ss_pred HHHhcccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHH
Q psy2870 341 IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420 (487)
Q Consensus 341 iF~~~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~ 420 (487)
.|+.||.||.|.|++.+|..+|..- ..-.+..++- +..-...|.+...+|++|+.
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~-------------k~ytqse~df------------llscae~dend~~~y~dfv~ 4116 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGH-------------KHYTQSEIDF------------LLSCAEADENDMFDYEDFVD 4116 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhcc-------------ccchhHHHHH------------HHHhhccCccccccHHHHHH
Confidence 4777999999999999999998742 1123344444 55556667778899999987
Q ss_pred HHH
Q psy2870 421 GLS 423 (487)
Q Consensus 421 ~l~ 423 (487)
-+.
T Consensus 4117 rfh 4119 (5019)
T KOG2243|consen 4117 RFH 4119 (5019)
T ss_pred Hhc
Confidence 653
No 142
>KOG0035|consensus
Probab=50.39 E-value=61 Score=37.75 Aligned_cols=68 Identities=15% Similarity=0.067 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChH-----HHHHHHHHhcccCCCccccHHHHHHHHHHHH
Q psy2870 299 YRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEE-----EKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366 (487)
Q Consensus 299 ~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~e-----ekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~ 366 (487)
...++.+|+-+|....|.++.++|+.++..++....+ ..+..+....|.++-|.+++.+|...|..-+
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~ 818 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREY 818 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhh
Confidence 4567889999999999999999999999888865442 3334444556777889999999999998754
No 143
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=47.55 E-value=29 Score=27.59 Aligned_cols=48 Identities=15% Similarity=0.210 Sum_probs=34.7
Q ss_pred CcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 315 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 315 G~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
-.+.|..+...+.. .....+...+...|+.=..+.|+++||...++.+
T Consensus 7 p~~~F~~L~~~l~~---~l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~I 54 (70)
T PF12174_consen 7 PWMPFPMLFSALSK---HLPPSKMDLLQKHYEEFKKKKISREEFVRKLRQI 54 (70)
T ss_pred CcccHHHHHHHHHH---HCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 34565555555544 4556667777777777788999999999999886
No 144
>KOG1265|consensus
Probab=46.18 E-value=1.4e+02 Score=34.96 Aligned_cols=63 Identities=19% Similarity=0.316 Sum_probs=51.2
Q ss_pred HHHHHHhhCCCCCCcccHHHHHHHHHHhcc----------CChHHHHHHHHHHhccCC----CCcccHHHHHHHHHH
Q psy2870 398 AHYVFNTLDHNKTGFLNFEDFVKGLSILCR----------GSEEEKLRWIFCLYDING----DGVISKDDLYNIVSS 460 (487)
Q Consensus 398 ~~~lF~~~D~D~DG~Is~eEF~~~l~~l~~----------~~~~eei~~iF~~~D~Dg----DG~Is~eEF~~~l~~ 460 (487)
+..+|..+..++.-.++.++|..++..-.. ......+..+...+..|. .|.|+.+-|.+++..
T Consensus 223 ie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 223 IEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred HHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 344999999888889999999999976332 456778999999997764 689999999998874
No 145
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=43.95 E-value=86 Score=28.63 Aligned_cols=60 Identities=15% Similarity=0.397 Sum_probs=40.8
Q ss_pred cccCCCccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCcccHHHHHHHHHH
Q psy2870 345 YDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424 (487)
Q Consensus 345 ~D~DgdG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~Is~eEF~~~l~~ 424 (487)
|-..+...++-..|..+++.+ +. ++.......++. +|..+-..+...|+|++|..+|..
T Consensus 11 fG~~~~~~m~~~~F~Kl~kD~----~i-----~d~k~t~tdvDi------------iF~Kvk~k~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 11 FGKKNGTEMDSKNFAKLCKDC----GI-----IDKKLTSTDVDI------------IFSKVKAKGARKITFEQFLEALAE 69 (154)
T ss_dssp SSTSTSSEEEHHHHHHHHHHT----SS-------SSS-HHHHHH------------HHHHHT-SS-SEEEHHHHHHHHHH
T ss_pred hcCCccccccHHHHHHHHHHc----CC-----CCCCCchHHHHH------------HHHHhhcCCCcccCHHHHHHHHHH
Confidence 345556689999999999875 22 223344556666 999987666778999999999876
Q ss_pred h
Q psy2870 425 L 425 (487)
Q Consensus 425 l 425 (487)
+
T Consensus 70 l 70 (154)
T PF05517_consen 70 L 70 (154)
T ss_dssp H
T ss_pred H
Confidence 4
No 146
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=39.23 E-value=42 Score=26.66 Aligned_cols=51 Identities=14% Similarity=0.176 Sum_probs=34.1
Q ss_pred CcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHh-hhh
Q psy2870 411 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV-YEL 464 (487)
Q Consensus 411 G~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~l-g~~ 464 (487)
-.++|..+..++... ++...+..+...|+.=..+.|+.+||.+.++.+ |+.
T Consensus 7 p~~~F~~L~~~l~~~---l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVGD~ 58 (70)
T PF12174_consen 7 PWMPFPMLFSALSKH---LPPSKMDLLQKHYEEFKKKKISREEFVRKLRQIVGDQ 58 (70)
T ss_pred CcccHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 346666666666554 555556666666655577889999998888875 544
No 147
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=36.52 E-value=1e+02 Score=27.83 Aligned_cols=37 Identities=5% Similarity=0.176 Sum_probs=21.6
Q ss_pred CccccHHHHHHHHHHHHHHhcccccccCChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCC
Q psy2870 350 DGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNK 409 (487)
Q Consensus 350 dG~Is~eEf~~~l~~l~~~~g~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~ 409 (487)
.+.|+++.|+.+|... +..+...+.+.. +|..|-...
T Consensus 46 ~~~Id~egF~~Fm~~y-----------Le~d~P~~lc~h------------LF~sF~~~~ 82 (138)
T PF14513_consen 46 EEPIDYEGFKLFMKTY-----------LEVDLPEDLCQH------------LFLSFQKKP 82 (138)
T ss_dssp TTEE-HHHHHHHHHHH-----------TT-S--HHHHHH------------HHHHS----
T ss_pred CCCcCHHHHHHHHHHH-----------HcCCCCHHHHHH------------HHHHHhCcc
Confidence 4589999999999876 344456666666 777775543
No 148
>KOG0998|consensus
Probab=35.34 E-value=15 Score=42.83 Aligned_cols=65 Identities=17% Similarity=0.258 Sum_probs=56.3
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHHH
Q psy2870 300 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366 (487)
Q Consensus 300 ~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l~ 366 (487)
..+..+|...|.+.+|.|+..++...+.. .+.....+..++...|.++.|.|++++|.-.+..+.
T Consensus 283 ~~~~~if~q~d~~~dG~I~s~~~~~~f~~--~gl~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~ 347 (847)
T KOG0998|consen 283 QKYSKIFSQVDKDNDGSISSNEARNIFLP--FGLSKPRLAHVWLLADTQNTGTLSKDEFALAMHLLE 347 (847)
T ss_pred HHHHHHHHhccccCCCccccccccccccc--CCCChhhhhhhhhhcchhccCcccccccchhhhhhh
Confidence 44556899999999999999999888765 678889999999999999999999999988776653
No 149
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=34.58 E-value=65 Score=27.42 Aligned_cols=26 Identities=15% Similarity=0.291 Sum_probs=18.1
Q ss_pred HHHHHHHHHhhcCCCCCccHHHHHHH
Q psy2870 197 EIKKIYRNFKAECPTGTIRQDTFKGI 222 (487)
Q Consensus 197 ei~~L~~~F~~l~~~G~i~~~~F~~~ 222 (487)
.-..+..+|.++..+|.+++..|-..
T Consensus 28 ~W~~VE~RFd~La~dG~L~rs~Fg~C 53 (100)
T PF08414_consen 28 GWKEVEKRFDKLAKDGLLPRSDFGEC 53 (100)
T ss_dssp -HHHHHHHHHHH-BTTBEEGGGHHHH
T ss_pred CHHHHHHHHHHhCcCCcccHHHHHHh
Confidence 35667778888888888888777554
No 150
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=34.41 E-value=4.8e+02 Score=26.03 Aligned_cols=88 Identities=14% Similarity=0.224 Sum_probs=48.3
Q ss_pred CCCccCHHHHHHHHHhhCC-CCCCcHHH---HHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHH---HHHHHHHhccc
Q psy2870 275 PTGTIRQDTFKGIYAKFFP-CGTSSYRY---AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEE---KLRWIFCLYDI 347 (487)
Q Consensus 275 ~sG~Is~eEF~~il~~l~~-~~~~~~~~---l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~ee---kl~~iF~~~D~ 347 (487)
.+|.++..|.. +...+.. .+ .+... +..+|+. ......++.+|+..+.........- -+..+|.+.=
T Consensus 68 ADG~Vse~Ei~-~~~~l~~~~~-l~~~~r~~a~~lf~~---~k~~~~~l~~~~~~~~~~~~~r~~l~~~lL~~l~~vA~- 141 (267)
T PRK09430 68 AKGRVTEADIR-IASQLMDRMN-LHGEARRAAQQAFRE---GKEPDFPLREKLRQFRSVCGGRFDLLRMFLEIQIQAAF- 141 (267)
T ss_pred cCCCcCHHHHH-HHHHHHHHcC-CCHHHHHHHHHHHHH---hcccCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-
Confidence 46888988887 3333321 11 12333 4555554 4445588999998887665332221 1244455543
Q ss_pred CCCccccHHHHHHHHHHHHHHhc
Q psy2870 348 NGDGVISKDDLYNIVSSVYELMG 370 (487)
Q Consensus 348 DgdG~Is~eEf~~~l~~l~~~~g 370 (487)
-||.++..|- .++..+...+|
T Consensus 142 -ADG~l~~~E~-~~L~~Ia~~Lg 162 (267)
T PRK09430 142 -ADGSLHPNER-QVLYVIAEELG 162 (267)
T ss_pred -hcCCCCHHHH-HHHHHHHHHcC
Confidence 3577888884 44555444444
No 151
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=34.20 E-value=24 Score=39.23 Aligned_cols=40 Identities=13% Similarity=0.036 Sum_probs=34.1
Q ss_pred CCCCcchHHHHHHHHHHhhcCCCCCCCCCccccccchhhh
Q psy2870 105 RDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFIDREF 144 (487)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (487)
.|...++..|||+.|++++|.+|.++.++.+|+|+.....
T Consensus 419 ~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 419 LDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred ccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 3455667889999999999999999999999999976444
No 152
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=34.03 E-value=1.8e+02 Score=24.14 Aligned_cols=55 Identities=4% Similarity=0.046 Sum_probs=44.8
Q ss_pred cccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHHhhhhhc
Q psy2870 412 FLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466 (487)
Q Consensus 412 ~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~lg~~l~ 466 (487)
.||.+|++...+..+-.++..+++.+...+-.+.=...+.+|-..++..+....+
T Consensus 14 ~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkeia~iT~ 68 (85)
T PF11116_consen 14 NITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLLKEIAKITS 68 (85)
T ss_pred cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcC
Confidence 5999999999999999999999999999886555556677888888887766433
No 153
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=33.68 E-value=1.8e+02 Score=24.01 Aligned_cols=50 Identities=10% Similarity=0.081 Sum_probs=20.8
Q ss_pred CCcccHHHHHHHHHHhcC--CChHHHHHHHHHhcccCCCccccHHHHHHHHH
Q psy2870 314 TGFLNFEDFVKGLSILCR--GSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363 (487)
Q Consensus 314 dG~IdfeEF~~~L~~l~~--~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~ 363 (487)
||.++-.|-..+-..+.. +........++..+........+..+|...+.
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 64 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIK 64 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 455555554333322211 22333334444444333333455555555443
No 154
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=33.02 E-value=15 Score=35.79 Aligned_cols=34 Identities=9% Similarity=0.144 Sum_probs=30.6
Q ss_pred CCCcchHHHHHHHHHHhhcCCCCCCCCCcccccc
Q psy2870 106 DAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEF 139 (487)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (487)
+..+.++.|||+.+|+.+|.+|.++.++.+|+|+
T Consensus 254 ~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 254 GILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 3467789999999999999999999999999885
No 155
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=31.71 E-value=60 Score=19.62 Aligned_cols=15 Identities=47% Similarity=0.691 Sum_probs=8.3
Q ss_pred ccCCCCcccHHHHHH
Q psy2870 442 DINGDGVISKDDLYN 456 (487)
Q Consensus 442 D~DgDG~Is~eEF~~ 456 (487)
|.|+||.|+.-++.-
T Consensus 1 DvN~DG~vna~D~~~ 15 (21)
T PF00404_consen 1 DVNGDGKVNAIDLAL 15 (21)
T ss_dssp -TTSSSSSSHHHHHH
T ss_pred CCCCCCcCCHHHHHH
Confidence 456666666655543
No 156
>KOG0042|consensus
Probab=31.37 E-value=85 Score=34.82 Aligned_cols=65 Identities=22% Similarity=0.277 Sum_probs=58.1
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 301 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 301 ~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
....-|..+|.|+.|.+...+.+..|.....+-.++.+.+..+-.|.+-+|++...||.+++..+
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~ 658 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAI 658 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHH
Confidence 34457889999999999999999999988878889999999999999999999999999988775
No 157
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=29.22 E-value=23 Score=35.08 Aligned_cols=41 Identities=12% Similarity=0.192 Sum_probs=34.0
Q ss_pred cchHHHHHHHHHHhhcCCCCCCCCCccccccchhhhhhhhccc
Q psy2870 109 FGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFIDREFRVKLWNM 151 (487)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (487)
...+.|||+.+++.+|..|.++.++.+|+|+.+- ..++|.+
T Consensus 261 ~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~--~~~~~~~ 301 (303)
T cd07869 261 VNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL--PPRLWEL 301 (303)
T ss_pred ChHHHHHHHHHhccCchhccCHHHHhcCcccccC--Chhhhhc
Confidence 4678999999999999999999999999999753 3355543
No 158
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=28.99 E-value=2e+02 Score=24.59 Aligned_cols=58 Identities=21% Similarity=0.252 Sum_probs=38.5
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhcc---CCCCcccHHHHHHHHHHhhh
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDI---NGDGVISKDDLYNIVSSVYE 463 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~---DgDG~Is~eEF~~~l~~lg~ 463 (487)
-|..+-. ||.|....|-.++- ...+.+-..++|..+-. -....|+.+|+..++..+.+
T Consensus 35 RFd~La~--dG~L~rs~Fg~CIG---M~dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qisD 95 (100)
T PF08414_consen 35 RFDKLAK--DGLLPRSDFGECIG---MKDSKEFAGELFDALARRRGIKGDSITKDELKEFWEQISD 95 (100)
T ss_dssp HHHHH-B--TTBEEGGGHHHHHT-----S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH-
T ss_pred HHHHhCc--CCcccHHHHHHhcC---CcccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhhc
Confidence 5666655 89999999999974 34566667777766632 12467999999999887654
No 159
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=28.45 E-value=49 Score=26.20 Aligned_cols=30 Identities=17% Similarity=0.308 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHH
Q psy2870 430 EEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460 (487)
Q Consensus 430 ~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~ 460 (487)
+.+++...|+.+ .++.++||.+|+.+.+..
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l~p 33 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSLTP 33 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS-C
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHcCc
Confidence 456788888888 778889999998876653
No 160
>PF11569 Homez: Homeodomain leucine-zipper encoding, Homez; PDB: 2YS9_A.
Probab=28.26 E-value=71 Score=24.31 Aligned_cols=27 Identities=11% Similarity=0.516 Sum_probs=20.0
Q ss_pred CCChHHHHHHHHhCCCCHHHHHHHHHH
Q psy2870 178 RYRPQSIEALCRATKFSEAEIKKIYRN 204 (487)
Q Consensus 178 ~l~~~~l~~l~~~t~fs~~ei~~L~~~ 204 (487)
.|.+..|..|++.+++|-+||+..|..
T Consensus 22 ~L~E~DL~~L~~kS~ms~qqVr~WFa~ 48 (56)
T PF11569_consen 22 QLQEEDLDELCDKSRMSYQQVRDWFAE 48 (56)
T ss_dssp ---TTHHHHHHHHTT--HHHHHHHHHH
T ss_pred CccHhhHHHHHHHHCCCHHHHHHHHHH
Confidence 566779999999999999999998764
No 161
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=27.56 E-value=25 Score=34.48 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=29.8
Q ss_pred CCcchHHHHHHHHHHhhcCCCCCCCCCcccccc
Q psy2870 107 APFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEF 139 (487)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (487)
..+..+.|||++|++.+|.+|.++.+..+|+|+
T Consensus 256 ~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 256 RLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 456788999999999999999999999999985
No 162
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=26.86 E-value=30 Score=34.35 Aligned_cols=32 Identities=13% Similarity=0.094 Sum_probs=28.8
Q ss_pred CcchHHHHHHHHHHhhcCCCCCCCCCcccccc
Q psy2870 108 PFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEF 139 (487)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (487)
++..+.|||+.|++.+|.+|.++.++.+|+|+
T Consensus 286 ~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 286 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 45568899999999999999999999999985
No 163
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=26.69 E-value=1.8e+02 Score=24.02 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=30.1
Q ss_pred CcccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHH
Q psy2870 315 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363 (487)
Q Consensus 315 G~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~ 363 (487)
-.|.+.+|...|.....-....+...+=..+|.-++|+||.-||-...+
T Consensus 21 ~IVPW~~F~~~L~~~h~~~~~~~~~aLk~TiDlT~n~~iS~FeFdvFtR 69 (85)
T PF02761_consen 21 TIVPWSEFRQALQKVHPISSGLEAMALKSTIDLTCNDYISNFEFDVFTR 69 (85)
T ss_dssp SEEEHHHHHHHHHHHS--SSHHHHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred eEeeHHHHHHHHHHhcCCCchHHHHHHHHHHhcccCCccchhhhHHHHH
Confidence 4577777777777666554444555555667777777777777765544
No 164
>KOG4004|consensus
Probab=26.21 E-value=31 Score=33.05 Aligned_cols=51 Identities=12% Similarity=0.277 Sum_probs=31.4
Q ss_pred cCCCCCccCHHHHHHHHHhhCCCCCCcHHHHHHHHHHhCCCCCCcccHHHHHHHH
Q psy2870 272 AECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGL 326 (487)
Q Consensus 272 ~~~~sG~Is~eEF~~il~~l~~~~~~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L 326 (487)
...-+|.++..|+..+-.-+.+ -+.-..+.|...|.|+||+|...||...+
T Consensus 198 ~~p~d~~~sh~el~pl~ap~ip----me~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 198 QHPIDGYLSHTELAPLRAPLIP----MEHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred CCCccccccccccccccCCccc----HHhhchhhhhcccCCCCCceeHHHhhccc
Confidence 3344577777777655444432 23445567777777777777777776554
No 165
>KOG0603|consensus
Probab=26.16 E-value=23 Score=39.33 Aligned_cols=49 Identities=14% Similarity=0.051 Sum_probs=44.2
Q ss_pred cCCCCCCcccccccccCCCCCCCCcchHHHHHHHHHHhhcCCCCCCCCCcccccc
Q psy2870 85 ADPEPLGQASTNSASADSSNRDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEF 139 (487)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (487)
++-+|...+..++.+ ..++..++|+++.||+-+|-.|.+..+...|+|+
T Consensus 518 ~~~ei~~~i~~~~~s------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 518 AGIEIHTRIQMPKFS------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred chHHHHHhhcCCccc------cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 345778888887777 8899999999999999999999999999999999
No 166
>KOG4004|consensus
Probab=25.77 E-value=29 Score=33.20 Aligned_cols=55 Identities=22% Similarity=0.277 Sum_probs=38.9
Q ss_pred HHhhCC-CCCCcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHH
Q psy2870 402 FNTLDH-NKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 458 (487)
Q Consensus 402 F~~~D~-D~DG~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l 458 (487)
|-.+|. --||.++-.|+.-+-..+ -..+..+..+|..-|.|+||+|+.+||...+
T Consensus 193 f~qld~~p~d~~~sh~el~pl~ap~--ipme~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred eccccCCCccccccccccccccCCc--ccHHhhchhhhhcccCCCCCceeHHHhhccc
Confidence 344553 358999998886552211 2234557889999999999999999997654
No 167
>KOG4286|consensus
Probab=24.95 E-value=7.1e+02 Score=28.88 Aligned_cols=118 Identities=17% Similarity=0.209 Sum_probs=75.1
Q ss_pred HHHHHHHHHhcccCC-CccccHHHHHHHHHHHHHHhcccccccC-ChhhHHHHHHHHhhhhhHHHHHHHHHhhCCCCCCc
Q psy2870 335 EEKLRWIFCLYDING-DGVISKDDLYNIVSSVYELMGTYAYRAF-DSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGF 412 (487)
Q Consensus 335 eekl~~iF~~~D~Dg-dG~Is~eEf~~~l~~l~~~~g~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~lF~~~D~D~DG~ 412 (487)
-..+..+|..++..+ +-..+..+....+...|..+......-. -.-.+.. -+.-++..||...+|.
T Consensus 419 ltl~l~if~~h~l~~~~e~m~~~~~i~~L~~~y~~l~e~~g~~v~v~l~vD~------------~lN~llNvyD~~R~g~ 486 (966)
T KOG4286|consen 419 LSLALDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHGNLVNVPLCVDM------------CLNWLLNVYDTGRTGR 486 (966)
T ss_pred HHHHHHHHHHhcccccCcCCCHHHHHHHHHHHHHHHHHHcccccccchHHHH------------HHHHHHHhcccCCCcc
Confidence 344566777776654 3455666666555554432211100000 0011222 2334888999999999
Q ss_pred ccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCccc------HHHHHHHHHHhhhh
Q psy2870 413 LNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS------KDDLYNIVSSVYEL 464 (487)
Q Consensus 413 Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is------~eEF~~~l~~lg~~ 464 (487)
|..-+|+-.+..++....++.+..+|+.+-.++...+. ..++.++.+.+|+.
T Consensus 487 irvls~ki~~i~lck~~leek~~ylF~~vA~~~sq~~q~~l~lLL~dliqipr~lGE~ 544 (966)
T KOG4286|consen 487 IRVLSFKIGIISLCKAHLEDKYRYLFKQVASSTSQCDQRRLGLLLHDLIQIPRQLGEV 544 (966)
T ss_pred eEEeeehhhHHHHhcchhHHHHHHHHHHHcCchhhHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999777665542 34556666666664
No 168
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=24.10 E-value=4.2e+02 Score=21.96 Aligned_cols=50 Identities=4% Similarity=0.040 Sum_probs=40.1
Q ss_pred cccHHHHHHHHHHhcCCChHHHHHHHHHhcccCCCccccHHHHHHHHHHH
Q psy2870 316 FLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365 (487)
Q Consensus 316 ~IdfeEF~~~L~~l~~~~~eekl~~iF~~~D~DgdG~Is~eEf~~~l~~l 365 (487)
.|+..|++.+........+...++.+.+.+-.+.-...+.++-..++..+
T Consensus 14 ~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkei 63 (85)
T PF11116_consen 14 NITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLLKEI 63 (85)
T ss_pred cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 57888888888888888888888888888877766777777777777765
No 169
>PLN02228 Phosphoinositide phospholipase C
Probab=23.99 E-value=2.3e+02 Score=31.64 Aligned_cols=59 Identities=17% Similarity=0.308 Sum_probs=44.5
Q ss_pred HHHhhCCCCCCcccHHHHHHHHHHhcc--CChHHHHHHHHHHhccC----CCCcccHHHHHHHHHHh
Q psy2870 401 VFNTLDHNKTGFLNFEDFVKGLSILCR--GSEEEKLRWIFCLYDIN----GDGVISKDDLYNIVSSV 461 (487)
Q Consensus 401 lF~~~D~D~DG~Is~eEF~~~l~~l~~--~~~~eei~~iF~~~D~D----gDG~Is~eEF~~~l~~l 461 (487)
+|..+-.+ +.|+.++|..+|..... ..+.+.+..+|..+... ..|.++.+.|..+|..-
T Consensus 29 if~~~s~~--~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s~ 93 (567)
T PLN02228 29 LFEAYSRN--GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSD 93 (567)
T ss_pred HHHHhcCC--CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcCc
Confidence 88887543 58999999999987654 24556678888887543 34689999999999753
No 170
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=23.68 E-value=2.8e+02 Score=22.96 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=39.1
Q ss_pred CcccHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHH
Q psy2870 411 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460 (487)
Q Consensus 411 G~Is~eEF~~~l~~l~~~~~~eei~~iF~~~D~DgDG~Is~eEF~~~l~~ 460 (487)
-.|...+|..++..........+...+=..+|.-.+|+||.=||--+.+-
T Consensus 21 ~IVPW~~F~~~L~~~h~~~~~~~~~aLk~TiDlT~n~~iS~FeFdvFtRl 70 (85)
T PF02761_consen 21 TIVPWSEFRQALQKVHPISSGLEAMALKSTIDLTCNDYISNFEFDVFTRL 70 (85)
T ss_dssp SEEEHHHHHHHHHHHS--SSHHHHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred eEeeHHHHHHHHHHhcCCCchHHHHHHHHHHhcccCCccchhhhHHHHHH
Confidence 56999999999999777666677788888999999999999998655543
No 171
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=23.51 E-value=45 Score=32.36 Aligned_cols=35 Identities=11% Similarity=0.039 Sum_probs=30.5
Q ss_pred CCCcchHHHHHHHHHHhhcCCCCCC-CCCccccccc
Q psy2870 106 DAPFGTFTNFIRSVWQKMSGSVSNS-SEQEEYPEFI 140 (487)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 140 (487)
+..+..+.+||+.+|+.+|.+|..+ .+..+|+|+.
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 231 KNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred cccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 3567789999999999999999876 8999999874
No 172
>PF05920 Homeobox_KN: Homeobox KN domain; InterPro: IPR008422 This entry represents a homeobox transcription factor KN domain conserved from fungi to human and plants [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3K2A_B 2LK2_A 1X2N_A 2DMN_A.
Probab=21.22 E-value=1.4e+02 Score=20.87 Aligned_cols=26 Identities=23% Similarity=0.301 Sum_probs=19.9
Q ss_pred CChHHHHHHHHhCCCCHHHHHHHHHH
Q psy2870 179 YRPQSIEALCRATKFSEAEIKKIYRN 204 (487)
Q Consensus 179 l~~~~l~~l~~~t~fs~~ei~~L~~~ 204 (487)
-++++.+.|.+.|++|.++|...+..
T Consensus 11 Ps~~ek~~L~~~tgls~~Qi~~WF~N 36 (40)
T PF05920_consen 11 PSKEEKEELAKQTGLSRKQISNWFIN 36 (40)
T ss_dssp --HHHHHHHHHHHTS-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34678889999999999999987654
No 173
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=20.98 E-value=37 Score=37.28 Aligned_cols=45 Identities=7% Similarity=-0.125 Sum_probs=36.2
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHhhc---CCCCCCCCCccccccc
Q psy2870 94 STNSASADSSNRDAPFGTFTNFIRSVWQKMS---GSVSNSSEQEEYPEFI 140 (487)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 140 (487)
..+...++ .++..+.+..||++.|+.+.+ ..|.++.++.+|+|+.
T Consensus 457 ~~~~~~~~--~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 457 KGQKYDFS--LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred cccCCCcc--cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 33444443 578889999999999999866 4799999999999985
No 174
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=20.70 E-value=45 Score=32.34 Aligned_cols=33 Identities=6% Similarity=-0.092 Sum_probs=29.4
Q ss_pred CCcchHHHHHHHHHHhhcCCCCCCCCCcccccc
Q psy2870 107 APFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEF 139 (487)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (487)
.....+.|+|+.|++.+|..|.++.++..|+|+
T Consensus 256 ~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 256 EIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred CcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 356678999999999999999999999999885
No 175
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=20.66 E-value=38 Score=32.78 Aligned_cols=34 Identities=6% Similarity=-0.058 Sum_probs=29.6
Q ss_pred CCCcchHHHHHHHHHHhhcCCCCCCCCCcccccc
Q psy2870 106 DAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEF 139 (487)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (487)
...+..+.++|+.+|..+|..|.+..++.+++|+
T Consensus 250 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 250 PNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 3455789999999999999999999999888875
No 176
>PTZ00284 protein kinase; Provisional
Probab=20.58 E-value=32 Score=36.82 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=29.9
Q ss_pred cchHHHHHHHHHHhhcCCCCCCCCCccccccch
Q psy2870 109 FGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFID 141 (487)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (487)
...+.|||+.||+.+|..|.++.+..+|+|+..
T Consensus 411 ~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 411 DDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred hHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence 456889999999999999999999999999853
No 177
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=20.15 E-value=77 Score=31.23 Aligned_cols=33 Identities=18% Similarity=0.119 Sum_probs=29.7
Q ss_pred CcchHHHHHHHHHHhhcCCCCCCCCCccccccc
Q psy2870 108 PFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFI 140 (487)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (487)
.+..+.+||+.+|+.+|..|.+..++.+++++.
T Consensus 267 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~ 299 (314)
T cd08216 267 FSEHFHQFVELCLQRDPESRPSASQLLNHSFFK 299 (314)
T ss_pred HHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence 346789999999999999999999999999974
No 178
>PLN02228 Phosphoinositide phospholipase C
Probab=20.13 E-value=3.4e+02 Score=30.40 Aligned_cols=66 Identities=14% Similarity=0.234 Sum_probs=49.2
Q ss_pred CcHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcCC--ChHHHHHHHHHhcccC----CCccccHHHHHHHHHH
Q psy2870 297 SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG--SEEEKLRWIFCLYDIN----GDGVISKDDLYNIVSS 364 (487)
Q Consensus 297 ~~~~~l~~lF~~~D~d~dG~IdfeEF~~~L~~l~~~--~~eekl~~iF~~~D~D----gdG~Is~eEf~~~l~~ 364 (487)
.+...+..+|..+-. ++.++.++|..+|...... ...+.+..+|..|... ..|.++.+.|..+|..
T Consensus 21 ~~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 21 EPPVSIKRLFEAYSR--NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred CCcHHHHHHHHHhcC--CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 356777888888753 3689999999999887643 4456778888887543 3468999999998854
Done!