RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2870
(487 letters)
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 134 bits (339), Expect = 9e-37
Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 27/187 (14%)
Query: 256 KGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTG 315
+ +Y F K ECP+G + ++TFK IY++FFP G S+ YAH++FN D + G
Sbjct: 67 QILYRGF--------KNECPSGVVNEETFKEIYSQFFPQGDST-TYAHFLFNAFDTDHNG 117
Query: 316 FLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYR 375
++FEDF+KGLSIL RG+ +EKL W F LYDIN DG I+K+++ +I+ ++Y++MG Y
Sbjct: 118 AVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYP 177
Query: 376 AFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLR 435
Q VE FQ +D NK G + ++F++ ++E +
Sbjct: 178 VLKEDAPRQHVETFFQ------------KMDKNKDGVVTIDEFIESC------QKDENIM 219
Query: 436 WIFCLYD 442
L++
Sbjct: 220 RSMQLFE 226
Score = 101 bits (253), Expect = 8e-25
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 23/155 (14%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+++E + GV++++ I S + Q
Sbjct: 62 TKKELQILYRGFKNECPSGVVNEETFKEIYSQFFP-----------------------QG 98
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
+ YAH++FN D + G ++FEDF+KGLSIL RG+ +EKL W F LYDIN DG I+K+
Sbjct: 99 DSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKE 158
Query: 453 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
++ +I+ ++Y++MG Y Q VE FQ
Sbjct: 159 EMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQ 193
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 129 bits (327), Expect = 1e-35
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 19/172 (11%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
+CP+G + + F+ IY +FFP G S +A YVFN D +K G+++F++F+ LS+
Sbjct: 35 FKDCPSGHLNKSEFQKIYKQFFPFGDPSA-FAEYVFNVFDADKNGYIDFKEFICALSVTS 93
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG +KL W F LYD++ +G+IS D++ IV ++Y+++G+ D +RV +F
Sbjct: 94 RGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIF 153
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYD 442
+D NK G L E+F +G + + LYD
Sbjct: 154 N------------MMDKNKDGQLTLEEFCEGS------KRDPTIVSALSLYD 187
Score = 100 bits (250), Expect = 8e-25
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
++E +W + G ++K + I +
Sbjct: 23 DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFP-----------------------FG 59
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
+A YVFN D +K G+++F++F+ LS+ RG +KL W F LYD++ +G+IS D
Sbjct: 60 DPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYD 119
Query: 453 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
++ IV ++Y+++G+ D +RV +F
Sbjct: 120 EMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFN 154
Score = 71.8 bits (176), Expect = 1e-14
Identities = 43/187 (22%), Positives = 71/187 (37%), Gaps = 28/187 (14%)
Query: 180 RPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG--STYLFHV 237
++ L R+T+F + E+++ Y+ F +CP+G + + F+ IY +FFP G S + +V
Sbjct: 9 SQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYV 68
Query: 238 GCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAEC--------PTGTIRQDTFKGIYA 289
A+ G I F + G K G I D I
Sbjct: 69 FNVFDADK-NGYIDFKEFICALSVTSR-GELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
Query: 290 KFFPCGTSSYR----------YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLR 339
+ S + + +FN +D NK G L E+F +G + +
Sbjct: 127 AIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGS------KRDPTIV 180
Query: 340 WIFCLYD 346
LYD
Sbjct: 181 SALSLYD 187
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 129 bits (326), Expect = 4e-35
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 27/168 (16%)
Query: 256 KGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTG 315
Y F E P+G FK + ++ ++ V+NT D NK G
Sbjct: 22 HVWYRTF--------MMEYPSGLQTLHEFKTLLGLQGLNQKAN-KHIDQVYNTFDTNKDG 72
Query: 316 FLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYR 375
F++F +F+ ++++ + E+KL+W F LYD +G+G I K++L ++ +V L G
Sbjct: 73 FVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQ---- 128
Query: 376 AFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
+ + + +F +D N G L E+F+ G++
Sbjct: 129 --QTLSPEEFINLVFH------------KIDINNDGELTLEEFINGMA 162
Score = 98.3 bits (245), Expect = 8e-24
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 23/134 (17%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+E W G+ + + ++ L G
Sbjct: 17 PTQETHVWYRTFMMEYPSGLQTLHEF----KTLLGLQGL-------------------NQ 53
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
++ V+NT D NK GF++F +F+ ++++ + E+KL+W F LYD +G+G I K+
Sbjct: 54 KANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKN 113
Query: 453 DLYNIVSSVYELMG 466
+L ++ +V L G
Sbjct: 114 ELLDMFMAVQALNG 127
Score = 67.9 bits (166), Expect = 2e-13
Identities = 30/187 (16%), Positives = 51/187 (27%), Gaps = 40/187 (21%)
Query: 179 YRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG--STYLFH 236
+ E YR F E P+G FK + + ++
Sbjct: 2 HMGNGKSIAGDQKAVPTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQ 61
Query: 237 VGCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGT 296
V T G + F F + E ++ FK +Y
Sbjct: 62 VYNTFDTNK-DGFV---DFLE-----FIAAVNLIMQEKMEQKLKW-YFK-LY-------- 102
Query: 297 SSYRYAHYVFNTLDHNKTGFLNFE---DFVKGLSILCRGSE---EEKLRWIFCLYDINGD 350
D + G ++ D + L EE + +F DIN D
Sbjct: 103 -------------DADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINND 149
Query: 351 GVISKDD 357
G ++ ++
Sbjct: 150 GELTLEE 156
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 127 bits (321), Expect = 1e-34
Identities = 51/153 (33%), Positives = 87/153 (56%), Gaps = 13/153 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
+CP+G + + FK IY FFP G +S ++A +VF T D N G ++F +F+ LS+
Sbjct: 35 LRDCPSGHLSMEEFKKIYGNFFPYGDAS-KFAEHVFRTFDANGDGTIDFREFIIALSVTS 93
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG E+KL+W F +YD++G+G ISK ++ IV ++Y+++ + D +R E +F
Sbjct: 94 RGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIF 153
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
+ +D N+ G L+ E+F++G
Sbjct: 154 R------------QMDTNRDGKLSLEEFIRGAK 174
Score = 100 bits (250), Expect = 8e-25
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+E E W G +S ++ I + +
Sbjct: 23 TEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFP-----------------------YG 59
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
++A +VF T D N G ++F +F+ LS+ RG E+KL+W F +YD++G+G ISK
Sbjct: 60 DASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKA 119
Query: 453 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
++ IV ++Y+++ + D +R E +F+
Sbjct: 120 EMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFR 154
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 126 bits (318), Expect = 3e-34
Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
+CP+G + F+ IY +FFP G + ++A +VFN D NK G + F +F++ LS+
Sbjct: 35 IKDCPSGQLDAAGFQKIYKQFFPFGDPT-KFATFVFNVFDENKDGRIEFSEFIQALSVTS 93
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ +EKLRW F LYD++ DG I+++++ +IV ++Y+++G + +RV+ +F
Sbjct: 94 RGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIF 153
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYD 442
+D N G L ++F +G + + LYD
Sbjct: 154 A------------MMDKNADGKLTLQEFQEGS------KADPSIVQALSLYD 187
Score = 97.6 bits (243), Expect = 8e-24
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 320 EDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDS 379
+ V+ L+ +E+E +W G + I +
Sbjct: 10 PEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFP------------ 57
Query: 380 GMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFC 439
++A +VFN D NK G + F +F++ LS+ RG+ +EKLRW F
Sbjct: 58 -----------FGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFK 106
Query: 440 LYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
LYD++ DG I+++++ +IV ++Y+++G + +RV+ +F
Sbjct: 107 LYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFA 154
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 126 bits (317), Expect = 4e-34
Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 19/172 (11%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
+CP+G + ++ F IY +FFP G+ +A+++F D + GF++FE+F+ LS
Sbjct: 35 LRDCPSGQLAREDFVKIYKQFFPFGSPE-DFANHLFTVFDKDNNGFIHFEEFITVLSTTS 93
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ EEKL W F LYD+N DG I+ D++ IV+SVY++MG+ D RV+ +F
Sbjct: 94 RGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIF 153
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYD 442
+ +D N+ G++ ++F +G + + LYD
Sbjct: 154 K------------LMDKNEDGYITLDEFREGS------KVDPSIIGALNLYD 187
Score = 94.5 bits (235), Expect = 1e-22
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
E +W G ++++D I +
Sbjct: 23 DRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFP-----------------------FG 59
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
S + +A+++F D + GF++FE+F+ LS RG+ EEKL W F LYD+N DG I+ D
Sbjct: 60 SPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFD 119
Query: 453 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
++ IV+SVY++MG+ D RV+ +F+
Sbjct: 120 EMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFK 154
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 124 bits (314), Expect = 1e-33
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 30/203 (14%)
Query: 256 KGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTG 315
Y KF ECP+G + FK + +++ +Y +F T D NK G
Sbjct: 17 HQWYKKF--------MTECPSGQLTLYEFKQFFGLKNLSPSAN-KYVEQMFETFDFNKDG 67
Query: 316 FLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYR 375
+++F ++V LS++ +G ++KLRW F LYD++G+G I + +L NI+ ++ +
Sbjct: 68 YIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINR----- 122
Query: 376 AFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL----SILCRGSEE 431
++ + +F +D N G L+ E+F++G+ +L +
Sbjct: 123 CNEAMTAEEFTNMVFD------------KIDINGDGELSLEEFMEGVQKDEVLLDILTRS 170
Query: 432 EKLRWIFCLYDINGDGVISKDDL 454
L I L +G + ++
Sbjct: 171 LDLTHIVKLIQNDGKNPHAPEEA 193
Score = 95.6 bits (238), Expect = 5e-23
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
S E +W G ++ + + L
Sbjct: 12 SATECHQWYKKFMTECPSGQLTLYEF----KQFFGLKNL-------------------SP 48
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
S +Y +F T D NK G+++F ++V LS++ +G ++KLRW F LYD++G+G I +
Sbjct: 49 SANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRG 108
Query: 453 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
+L NI+ ++ + ++ + +F
Sbjct: 109 ELLNIIKAIRAINR-----CNEAMTAEEFTNMVFD 138
Score = 59.4 bits (144), Expect = 2e-10
Identities = 33/198 (16%), Positives = 62/198 (31%), Gaps = 44/198 (22%)
Query: 187 LCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG--STYLFHVGCTIKAE 244
+ S E + Y+ F ECP+G + FK + + Y+ + T
Sbjct: 5 SKAVEELSATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETF--- 61
Query: 245 CPTGTIRQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHY 304
D K G I + + + +
Sbjct: 62 --------DFNK-------------------DGYIDFMEYVAALSLV--LKGKVDQKLRW 92
Query: 305 VFNTLDHNKTGFLN---FEDFVKGLSILCRGSE----EEKLRWIFCLYDINGDGVISKDD 357
F D + G ++ + +K + + R +E EE +F DINGDG +S ++
Sbjct: 93 YFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEE 152
Query: 358 LYNIVS---SVYELMGTY 372
V + +++
Sbjct: 153 FMEGVQKDEVLLDILTRS 170
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 124 bits (312), Expect = 1e-33
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 13/153 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
K E P+G + ++TFK IYA+FFP G +S YAHY+FN D +TG + FEDFV LSIL
Sbjct: 28 KNEXPSGVVNEETFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILL 86
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ EKLRW F LYDIN DG I+K+++ +IV ++Y++MG Y Y Q V+ F
Sbjct: 87 RGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFF 146
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
Q +D NK G + ++F++
Sbjct: 147 Q------------KMDKNKDGIVTLDEFLESXQ 167
Score = 97.2 bits (242), Expect = 1e-23
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
++ E + GV++++ I + +
Sbjct: 16 TKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFP-----------------------HG 52
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
YAHY+FN D +TG + FEDFV LSIL RG+ EKLRW F LYDIN DG I+K+
Sbjct: 53 DASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKE 112
Query: 453 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
++ +IV ++Y++MG Y Y Q V+ FQ
Sbjct: 113 EMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 147
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 125 bits (314), Expect = 2e-33
Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 13/153 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
K ECP+G + ++TFK IYA+FFP G +S YAHY+FN D +TG + FEDFV LSIL
Sbjct: 61 KNECPSGVVNEETFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILL 119
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ EKLRW F LYDIN DG I+K+++ +IV ++Y++MG Y Y Q V+ F
Sbjct: 120 RGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFF 179
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
Q +D NK G + ++F++
Sbjct: 180 Q------------KMDKNKDGIVTLDEFLESCQ 200
Score = 94.3 bits (234), Expect = 2e-22
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
++ E + GV++++ I + +
Sbjct: 49 TKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFP-----------------------HG 85
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
YAHY+FN D +TG + FEDFV LSIL RG+ EKLRW F LYDIN DG I+K+
Sbjct: 86 DASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKE 145
Query: 453 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
++ +IV ++Y++MG Y Y Q V+ FQ
Sbjct: 146 EMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 180
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 125 bits (315), Expect = 4e-33
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 13/153 (8%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
K ECPTG + +DTFK IY++FFP G ++ YAH++FN D + G ++FEDFV GLSIL
Sbjct: 101 KNECPTGLVDEDTFKLIYSQFFPQGDAT-TYAHFLFNAFDADGNGAIHFEDFVVGLSILL 159
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
RG+ EKL+W F LYDIN DG I+K+++ I+ S+Y++MG + Y + VE F
Sbjct: 160 RGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFF 219
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
Q +D N+ G + ++F++
Sbjct: 220 Q------------KMDRNQDGVVTIDEFLETCQ 240
Score = 94.7 bits (235), Expect = 3e-22
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+++E + G++ +D I S + Q
Sbjct: 89 TKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFP-----------------------QG 125
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
YAH++FN D + G ++FEDFV GLSIL RG+ EKL+W F LYDIN DG I+K+
Sbjct: 126 DATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKE 185
Query: 453 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
++ I+ S+Y++MG + Y + VE FQ
Sbjct: 186 EMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQ 220
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 119 bits (299), Expect = 2e-31
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 255 FKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKT 314
+ Y KF ECP+GT+ FK + K ++ +Y +F D N
Sbjct: 24 LQEWYKKF--------LEECPSGTLFMHEFKRFF-KVPDNEEAT-QYVEAMFRAFDTNGD 73
Query: 315 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAY 374
++F ++V L+++ RG+ E KL+W F +YD + +G I + +L +IV S+Y+L
Sbjct: 74 NTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKAC-- 131
Query: 375 RAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
+ + + ++ + +F +D N G L+ +FV+G
Sbjct: 132 -----SVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 175
Score = 94.5 bits (235), Expect = 1e-22
Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 29/160 (18%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+ W + G + + ++ D+
Sbjct: 20 DAAQLQEWYKKFLEECPSGTLFMHEFKRF------------FKVPDNEE----------- 56
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
+Y +F D N ++F ++V L+++ RG+ E KL+W F +YD + +G I +
Sbjct: 57 -ATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQ 115
Query: 453 DLYNIVSSVYELMGTYAYRA-----FDSGMVAQRVEYLFQ 487
+L +IV S+Y+L + + V+ +F
Sbjct: 116 ELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFL 155
Score = 57.9 bits (140), Expect = 6e-10
Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 50/198 (25%)
Query: 178 RYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKF-FPCGSTYLFH 236
++ + E A++++ Y+ F ECP+GT+ FK + + Y+
Sbjct: 4 QFSWEEAEENGAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEA 63
Query: 237 VGCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGT 296
+ TI F + + ++
Sbjct: 64 MFRAFDTNG-DNTI---DFLE-----YVAALNLVLRGTLEHKLKW--------------- 99
Query: 297 SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL-----------------CRGSEEEKLR 339
F D ++ G ++ ++ + + + + EE +
Sbjct: 100 --------TFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVD 151
Query: 340 WIFCLYDINGDGVISKDD 357
IF L D NGDG +S ++
Sbjct: 152 RIFLLVDENGDGQLSLNE 169
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 116 bits (292), Expect = 2e-30
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
+CPTG I Q F+ IYAKFFP YA +VF + D N G L+F+++V L +
Sbjct: 43 LKDCPTGRITQQQFQSIYAKFFPDTDPK-AYAQHVFRSFDSNLDGTLDFKEYVIALHMTT 101
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYR--AFDSGMVAQRVEY 388
G +KL W F LYD++G+G ISK+++ IV ++++++ + D +R E
Sbjct: 102 AGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEK 161
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
+++ N L ++F++G
Sbjct: 162 IWK------------YFGKNDDDKLTEKEFIEGTL 184
Score = 89.7 bits (222), Expect = 7e-21
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 320 EDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDS 379
++ ++ L + + SEEE W G I++ +I + +
Sbjct: 18 KEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFP------------ 65
Query: 380 GMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFC 439
+ YA +VF + D N G L+F+++V L + G +KL W F
Sbjct: 66 -----------DTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFS 114
Query: 440 LYDINGDGVISKDDLYNIVSSVYELMGTYAYR--AFDSGMVAQRVEYLFQ 487
LYD++G+G ISK+++ IV ++++++ + D +R E +++
Sbjct: 115 LYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWK 164
Score = 73.5 bits (180), Expect = 3e-15
Identities = 46/177 (25%), Positives = 66/177 (37%), Gaps = 24/177 (13%)
Query: 173 NIDSPRYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCG-- 230
N S + +E L TKFSE E+ Y++F +CPTG I Q F+ IYAKFFP
Sbjct: 10 NSKSGALSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDP 69
Query: 231 STYLFHVGCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAECP--------TGTIRQD 282
Y HV + + GT+ + G T K E GTI ++
Sbjct: 70 KAYAQHVFRSFDSNL-DGTLDFKEYVIALHMTTA-GKTNQKLEWAFSLYDVDGNGTISKN 127
Query: 283 TFKGIYAKFFPCGTSSY------------RYAHYVFNTLDHNKTGFLNFEDFVKGLS 327
I F T + A ++ N L ++F++G
Sbjct: 128 EVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 103 bits (258), Expect = 2e-25
Identities = 41/247 (16%), Positives = 72/247 (29%), Gaps = 81/247 (32%)
Query: 178 RYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGSTYLFHV 237
E L R T FS +EI+ +Y F
Sbjct: 27 SGGLGDPELLARDTVFSVSEIEA---------------------LYELF----------- 54
Query: 238 GCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTS 297
K G I ++ F+ A F
Sbjct: 55 ----KKISSA-------------------------VIDDGLINKEEFQ--LALFKTNKKE 83
Query: 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKD 356
S +A VF+ D G L FE+F + LS+ ++K+ + F LYD+ G I +
Sbjct: 84 S-LFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 142
Query: 357 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFE 416
++ +V + G ++ ++ F+ D G ++ E
Sbjct: 143 EVKQMVVATLAESGM----NLKDTVIEDIIDKTFE------------EADTKHDGKIDKE 186
Query: 417 DFVKGLS 423
++ +
Sbjct: 187 EWRSLVL 193
Score = 83.3 bits (206), Expect = 2e-18
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 397 YAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLY 455
+A VF+ D G L FE+F + LS+ ++K+ + F LYD+ G I + ++
Sbjct: 86 FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVK 145
Query: 456 NIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
+V + G ++ ++ F+
Sbjct: 146 QMVVATLAESGM----NLKDTVIEDIIDKTFE 173
Score = 45.6 bits (108), Expect = 1e-05
Identities = 27/167 (16%), Positives = 60/167 (35%), Gaps = 34/167 (20%)
Query: 303 HYVFNTLDHN--KTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ +F + G +N E+F L + R +F L+D +G++ ++
Sbjct: 51 YELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADR-VFDLFDTKHNGILGFEEFAR 109
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+S + + + ++ + FQ+ Y D + GF+ ++ +
Sbjct: 110 ALSVFHP-----------NAPIDDKIHFSFQL-------Y-----DLKQQGFIERQEVKQ 146
Query: 421 GLSILCRGSE--------EEKLRWIFCLYDINGDGVISKDDLYNIVS 459
+ S E+ + F D DG I K++ ++V
Sbjct: 147 MVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 193
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 101 bits (254), Expect = 2e-25
Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 23/160 (14%)
Query: 271 KAECPTGTIRQDTFKGIYAKF-----FPCGTSSYRYAHYVFNTLDHNKT-GFLNFEDFVK 324
P ++ F P ++ + + + L+FEDF+
Sbjct: 27 CELLPQEQRSVESSLRAQVPFEQILSLPELKAN-PFKERICRVFSTSPAKDSLSFEDFLD 85
Query: 325 GLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVA 383
LS+ + + K + F ++D + DG ++++DL +V+ L G + +
Sbjct: 86 LLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNC---LTGEGEDTRLSASEMK 142
Query: 384 QRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
Q ++ + + D ++ G +N +F +S
Sbjct: 143 QLIDNILE------------ESDIDRDGTINLSEFQHVIS 170
Score = 81.0 bits (200), Expect = 4e-18
Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 397 YAHYVFNTLDHNKT-GFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDL 454
+ + + L+FEDF+ LS+ + + K + F ++D + DG ++++DL
Sbjct: 61 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 120
Query: 455 YNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
+V+ L G + + Q ++ + +
Sbjct: 121 SRLVNC---LTGEGEDTRLSASEMKQLIDNILE 150
Score = 69.8 bits (171), Expect = 4e-14
Identities = 31/205 (15%), Positives = 60/205 (29%), Gaps = 46/205 (22%)
Query: 181 PQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKF-----FPCGSTYLF 235
+ + T ++ EI +R F P ++ F P F
Sbjct: 2 KELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPF 61
Query: 236 --HVGCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFP 293
+ ++ + F + + F + +K
Sbjct: 62 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIK---------------------- 99
Query: 294 CGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLR---------WIFCL 344
+HY F D + G LN ED + ++ L E+ +L I
Sbjct: 100 --------SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEE 151
Query: 345 YDINGDGVISKDDLYNIVSSVYELM 369
DI+ DG I+ + +++S +
Sbjct: 152 SDIDRDGTINLSEFQHVISRSPDFA 176
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 101 bits (252), Expect = 8e-25
Identities = 28/154 (18%), Positives = 61/154 (39%), Gaps = 20/154 (12%)
Query: 271 KAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
+ G I ++ F+ A F + +A +F+ D + G + F +FV+ L +
Sbjct: 48 SSIIDDGLIHKEEFQ--LALFRNRNRRN-LFADRIFDVFDVKRNGVIEFGEFVRSLGVFH 104
Query: 331 -RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYL 389
EK+++ F LYD+ G I +++L +V + ++ + L
Sbjct: 105 PSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVA----------------LLHESELVL 148
Query: 390 FQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
+ + F D G ++ +++ +S
Sbjct: 149 SEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182
Score = 82.9 bits (205), Expect = 1e-18
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 384 QRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYD 442
Q + + +A +F+ D + G + F +FV+ L + EK+++ F LYD
Sbjct: 62 QLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYD 121
Query: 443 INGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
+ G I +++L +V ++ M+ V+ F
Sbjct: 122 LRQTGFIEREELKEMVVALLHESEL----VLSEDMIEVMVDKAFV 162
Score = 62.5 bits (152), Expect = 2e-11
Identities = 40/195 (20%), Positives = 60/195 (30%), Gaps = 43/195 (22%)
Query: 181 PQSIEALCRATKFSEAEIKKIYRNFKAECPT----GTIRQDTFKGIYAKFFPCGSTYLFH 236
+ E L T F+ E++ +Y FK + G I ++ F+ A F LF
Sbjct: 19 YEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQ--LALFRNRNRRNLF- 75
Query: 237 VGCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGT 296
I+ F + G I F F P
Sbjct: 76 ------------------ADRIFDVFDVKRN---------GVIEFGEFVRSLGVFHPSAP 108
Query: 297 SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE--------EEKLRWIFCLYDIN 348
+ F D +TGF+ E+ + + L SE E + F D
Sbjct: 109 VH-EKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRK 167
Query: 349 GDGVISKDDLYNIVS 363
DG I D+ + VS
Sbjct: 168 NDGKIDIDEWKDFVS 182
Score = 49.0 bits (117), Expect = 7e-07
Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 34/167 (20%)
Query: 303 HYVFNTLDHN--KTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+ +F L + G ++ E+F L R IF ++D+ +GVI +
Sbjct: 40 YELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADR-IFDVFDVKRNGVIEFGEFVR 98
Query: 361 IVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+ + S V ++V++ F++ Y D +TGF+ E+ +
Sbjct: 99 SLGVFHP-----------SAPVHEKVKFAFKL-------Y-----DLRQTGFIEREELKE 135
Query: 421 GLSILCRGSE--------EEKLRWIFCLYDINGDGVISKDDLYNIVS 459
+ L SE E + F D DG I D+ + VS
Sbjct: 136 MVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 93.8 bits (233), Expect = 4e-22
Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 23/160 (14%)
Query: 271 KAECPTGTIRQDTFKGIYAKF-----FPCGTSSYRYAHYVFNTLDHNK-TGFLNFEDFVK 324
P ++ F P ++ + + + L+FEDF+
Sbjct: 58 CELLPQEQRSVESSLRAQVPFEQILSLPELKAN-PFKERICRVFSTSPAKDSLSFEDFLD 116
Query: 325 GLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVA 383
LS+ + + K + F ++D + DG ++++DL +V+ L G + +
Sbjct: 117 LLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNC---LTGEGEDTRLSASEMK 173
Query: 384 QRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
Q ++ + + D ++ G +N +F +S
Sbjct: 174 QLIDNILE------------ESDIDRDGTINLSEFQHVIS 201
Score = 74.9 bits (184), Expect = 1e-15
Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 397 YAHYVFNTLDHNK-TGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDL 454
+ + + L+FEDF+ LS+ + + K + F ++D + DG ++++DL
Sbjct: 92 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 151
Query: 455 YNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
+V+ L G + + Q ++ + +
Sbjct: 152 SRLVNC---LTGEGEDTRLSASEMKQLIDNILE 181
Score = 69.1 bits (169), Expect = 1e-13
Identities = 32/210 (15%), Positives = 61/210 (29%), Gaps = 46/210 (21%)
Query: 176 SPRYRPQSIEALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKF-----FPCG 230
R + + T ++ EI +R F P ++ F P
Sbjct: 28 GSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPEL 87
Query: 231 STYLF--HVGCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIY 288
F + ++ + F + + F + +K
Sbjct: 88 KANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIK----------------- 130
Query: 289 AKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKL---------R 339
+HY F D + G LN ED + ++ L E+ +L
Sbjct: 131 -------------SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLID 177
Query: 340 WIFCLYDINGDGVISKDDLYNIVSSVYELM 369
I DI+ DG I+ + +++S +
Sbjct: 178 NILEESDIDRDGTINLSEFQHVISRSPDFA 207
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 78.7 bits (194), Expect = 5e-17
Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 41/167 (24%)
Query: 273 ECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL--- 329
+ GT+ ++ F+ I + + N +NF F++ L+
Sbjct: 40 KGENGTLSREDFQRIPEL------AINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPI 93
Query: 330 -------------CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRA 376
S KL + F LYD++ D IS+D+L ++ + + +
Sbjct: 94 EDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNIS----- 148
Query: 377 FDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
+ + D + ++F +FVK L
Sbjct: 149 --DEQLGSIAD------------RTIQEADQDGDSAISFTEFVKVLE 181
Score = 74.0 bits (182), Expect = 2e-15
Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 46/153 (30%)
Query: 333 SEEEKLRW--IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
S + R F D +G +S++D I
Sbjct: 24 SHSQITRLYSRFTSLDKGENGTLSREDFQRI----------------------------P 55
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL----------------CRGSEEEKL 434
+++ + N +NF F++ L+ S KL
Sbjct: 56 ELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKL 115
Query: 435 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGT 467
+ F LYD++ D IS+D+L ++ + + +
Sbjct: 116 HFAFRLYDLDKDDKISRDELLQVLRMMVGVNIS 148
Score = 49.0 bits (117), Expect = 7e-07
Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 17/160 (10%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
F +LD + G L+ EDF + + + I + G+ ++ ++
Sbjct: 35 FTSLDKGENGTLSREDFQRIPELAINPLGDR----IINAFFSEGEDQVNFRGFMRTLAHF 90
Query: 366 YELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 425
D+ S H+ F D +K ++ ++ ++ L ++
Sbjct: 91 R--------PIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMM 142
Query: 426 C--RGSEEE---KLRWIFCLYDINGDGVISKDDLYNIVSS 460
S+E+ D +GD IS + ++
Sbjct: 143 VGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182
Score = 32.1 bits (73), Expect = 0.29
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 429 SEEEKLRW--IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDS 475
S + R F D +G +S++D I +G AF S
Sbjct: 24 SHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFS 72
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 71.3 bits (175), Expect = 8e-15
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 17/129 (13%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
++L+ F +D +G+G + + D + E G A A + +
Sbjct: 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKN---------A 55
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEK--------LRWIFCLYDING 445
Y+ G L E F++ L E ++ I + D N
Sbjct: 56 FGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNA 115
Query: 446 DGVISKDDL 454
DG I+ D+
Sbjct: 116 DGQINADEF 124
Score = 60.9 bits (148), Expect = 3e-11
Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 33/163 (20%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCR-------GSEEEKLRWIFCLY--------DING 349
F+ D + G L DF K + +E + L+ F +
Sbjct: 12 RFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGS 71
Query: 350 DGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNK 409
DG ++++ + + ++ ++ E F + D N
Sbjct: 72 DGSLTEEQFIRVTEN----------------LIFEQGEASFNRVLGPVVKGIVGMCDKNA 115
Query: 410 TGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
G +N ++F L+ L G + + F D NG+G +S D
Sbjct: 116 DGQINADEFAAWLTAL--GMSKAEAAEAFNQVDTNGNGELSLD 156
Score = 47.8 bits (114), Expect = 1e-06
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 34/129 (26%)
Query: 300 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEK--------LRWIFCLYDINGDG 351
Y+ G L E F++ L E ++ I + D N DG
Sbjct: 58 GLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADG 117
Query: 352 VISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTG 411
I+ D+ ++ +G ++ A FN +D N G
Sbjct: 118 QINADEF----AAWLTALGM----------------------SKAEAAEAFNQVDTNGNG 151
Query: 412 FLNFEDFVK 420
L+ ++ +
Sbjct: 152 ELSLDELLT 160
Score = 43.2 bits (102), Expect = 4e-05
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGT 467
++L+ F +D +G+G + + D + E G
Sbjct: 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGK 42
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 70.5 bits (173), Expect = 2e-14
Identities = 21/128 (16%), Positives = 39/128 (30%), Gaps = 16/128 (12%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
E ++ F +D +G+G I + D ++ G A
Sbjct: 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSD---------RGQALYGG 52
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEK-------LRWIFCLYDINGD 446
+ + D + + E+FV G R + L + D +GD
Sbjct: 53 AEALWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGD 112
Query: 447 GVISKDDL 454
G ++ D
Sbjct: 113 GAVTVADT 120
Score = 54.4 bits (131), Expect = 5e-09
Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 38/165 (23%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILC---------------RGSEEEKLRWIFCLYDING 349
F T D + G ++ DF + G E + + + D +G
Sbjct: 9 RFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDG 68
Query: 350 DGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVE--YLFQVSTQRYAHYVFNTLDH 407
D I++++ F +G V + + F + + H D
Sbjct: 69 DQRITREE-------------------FVTGAVKRLRDKPDRFAEMARPFLHAALGVADT 109
Query: 408 NKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
+ G + D + L+ G E+ R D +GDG + +
Sbjct: 110 DGDGAVTVADTARALTAF--GVPEDLARQAAAALDTDGDGKVGET 152
Score = 42.8 bits (101), Expect = 5e-05
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466
E ++ F +D +G+G I + D ++ G
Sbjct: 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFG 38
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 71.8 bits (176), Expect = 3e-14
Identities = 26/177 (14%), Positives = 55/177 (31%), Gaps = 33/177 (18%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSI---------LCRGSEEEKLRWIFCLYDINGDGVISKDD 357
+ G + + L + E+ + YD + G I ++
Sbjct: 65 DQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEE 124
Query: 358 LYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFED 417
L N + + A + D +A+ + + + D N G L +
Sbjct: 125 LKNFLKD----LLEKANKTVDDTKLAEYTDLMLK------------LFDSNNDGKLELTE 168
Query: 418 FVK--------GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466
+ L ++ F LYD +G+G I +++L ++ + E
Sbjct: 169 MARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNK 225
Score = 54.9 bits (132), Expect = 1e-08
Identities = 18/139 (12%), Positives = 39/139 (28%), Gaps = 27/139 (19%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
+ I+ +D +G G + +L N + +E ++
Sbjct: 14 TASQFFEIWLHFDADGSGYLEGKELQN------------LIQELLQARKKAGLELSPEMK 61
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI---------LCRGSEEEKLRWIFCLYDIN 444
T + G + + L + E+ + YD +
Sbjct: 62 T------FVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTD 115
Query: 445 GDGVISKDDLYNIVSSVYE 463
G I ++L N + + E
Sbjct: 116 HSGFIETEELKNFLKDLLE 134
Score = 45.6 bits (108), Expect = 1e-05
Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 27/119 (22%)
Query: 310 DHNKTGFLNFEDFVK--------GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
D N G L + + L ++ F LYD +G+G I +++L +
Sbjct: 157 DSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDAL 216
Query: 362 VSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+ + E + D ++ Y N + + G L D
Sbjct: 217 LKDLCEKNK----QELDINNIST---------------YKKNIMALSDGGKLYRTDLAL 256
Score = 31.4 bits (71), Expect = 0.61
Identities = 10/81 (12%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEE------EKLRWIFCLYDINGDGVISKDDL 454
++ D + +G+L ++ + L + ++ +++ Y DG I +L
Sbjct: 21 IWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVEL 80
Query: 455 YNIVSSVYELMGTYAYRAFDS 475
+++ + + + + S
Sbjct: 81 AHVLPTEENFLLLFRCQQLKS 101
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 69.0 bits (169), Expect = 7e-14
Identities = 20/128 (15%), Positives = 45/128 (35%), Gaps = 22/128 (17%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
K++ D+ GDG IS++D I + ++ + + A++ E Q
Sbjct: 12 HLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKI----------AKLSAEKAEETRQEF 61
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEK-------LRWIFCLYDINGD 446
+ V + L ++ E+ + + E+ ++ D + D
Sbjct: 62 LR-----VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKD 116
Query: 447 GVISKDDL 454
G +S +
Sbjct: 117 GYVSLPEF 124
Score = 50.9 bits (122), Expect = 1e-07
Identities = 24/142 (16%), Positives = 47/142 (33%), Gaps = 32/142 (22%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEK-------LRWIFCLYDINGDGVISKDD 357
V + L ++ E+ + + E+ ++ D + DG +S +
Sbjct: 64 VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123
Query: 358 LYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFED 417
+ +V + T A FNTLD NK G ++ ++
Sbjct: 124 FKAFLQAVGPDL------------------------TDDKAITCFNTLDFNKNGQISRDE 159
Query: 418 FVKGLSILCRGSEEEKL-RWIF 438
F+ ++ G EE L +
Sbjct: 160 FLVTVNDFLFGLEETALANAFY 181
Score = 41.6 bits (98), Expect = 1e-04
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466
K++ D+ GDG IS++D I + ++
Sbjct: 12 HLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAK 48
Score = 41.6 bits (98), Expect = 2e-04
Identities = 14/67 (20%), Positives = 31/67 (46%)
Query: 300 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLY 359
+ +++ +D +K G+++ +F L + ++K F D N +G IS+D+
Sbjct: 102 IQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
Query: 360 NIVSSVY 366
V+
Sbjct: 162 VTVNDFL 168
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 69.0 bits (169), Expect = 1e-13
Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 47/147 (31%)
Query: 333 SEEEKLRW--IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
S+ LR F D N G +S+ DL I A + R
Sbjct: 24 SQASLLRLHHRFRALDRNKKGYLSRMDLQQI-------------GALAVNPLGDR----- 65
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-----------------RGSEEEK 433
+ + + + ++F FV+ L+ S K
Sbjct: 66 ----------IIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNK 115
Query: 434 LRWIFCLYDINGDGVISKDDLYNIVSS 460
L + F LYD++ DG IS+ ++ ++
Sbjct: 116 LHYAFQLYDLDRDGKISRHEMLQVLRL 142
Score = 63.2 bits (154), Expect = 8e-12
Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 39/147 (26%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILC-----------------RGSEEEKLRWIFCLYDI 347
+ + + + ++F FV+ L+ S KL + F LYD+
Sbjct: 66 IIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDL 125
Query: 348 NGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDH 407
+ DG IS+ ++ ++ ++G + + + A D
Sbjct: 126 DRDGKISRHEMLQVLR---LMVG----------------VQVTEEQLENIADRTVQEADE 166
Query: 408 NKTGFLNFEDFVKGLSILCRGSEEEKL 434
+ G ++F +F K L + E+K+
Sbjct: 167 DGDGAVSFVEFTKSLE---KMDVEQKM 190
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein;
2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1
PDB: 1eg4_A
Length = 261
Score = 69.7 bits (170), Expect = 1e-13
Identities = 24/142 (16%), Positives = 50/142 (35%), Gaps = 17/142 (11%)
Query: 349 GDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV--STQRYAHYVFNTLD 406
D + + N ++++Y+ + Q L V +++ N D
Sbjct: 96 NDQPMDILQIINCLTTIYD-------------RLEQEHNNLVNVPLCVDMCLNWLLNVYD 142
Query: 407 HNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466
+TG + F G+ LC+ E+K R++F + G + L ++ ++
Sbjct: 143 TGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPR 201
Query: 467 -TYAYRAFDSGMVAQRVEYLFQ 487
+F + V FQ
Sbjct: 202 QLGEVASFGGSNIEPSVRSCFQ 223
Score = 67.0 bits (163), Expect = 1e-12
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 301 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 360
+++ N D +TG + F G+ LC+ E+K R++F + G + L
Sbjct: 133 CLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGL 191
Query: 361 IVSSVYELMG-TYAYRAFDSGMVAQRVEYLFQ 391
++ ++ +F + V FQ
Sbjct: 192 LLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ 223
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 65.7 bits (161), Expect = 5e-13
Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 29/126 (23%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
E ++L F D++ G +S ++ ++ + QRV
Sbjct: 4 EIKRLGKRFKKLDLDNSGSLSVEEFMSL-------------PELQQNPLVQRV------- 43
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKD 452
+ D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS
Sbjct: 44 --------IDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNG 95
Query: 453 DLYNIV 458
+L+ ++
Sbjct: 96 ELFQVL 101
Score = 60.3 bits (147), Expect = 3e-11
Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363
V + D + G ++F++F++G+S +G +E+KLR+ F +YD++ DG IS +L+ ++
Sbjct: 43 VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK 102
Query: 364 SVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
++G L Q+ D + G ++FE+F
Sbjct: 103 ---MMVG----------------NNLKDTQLQQIVDKTIINADKDGDGRISFEEFCA--- 140
Query: 424 ILCRGSEEEKL 434
++ +K+
Sbjct: 141 VVGGLDIHKKM 151
Score = 41.1 bits (97), Expect = 2e-04
Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 32/160 (20%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
F LD + +G L+ E+F+ + R + ++D +G+G +
Sbjct: 12 FKKLDLDNSGSLSVEEFMSLPEL---QQNPLVQR-VIDIFDTDGNGEVD----------- 56
Query: 366 YELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 425
++ F G+ V+ ++ + F D +K G+++ + + L ++
Sbjct: 57 --------FKEFIEGVSQFSVK----GDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMM 104
Query: 426 CRGS-----EEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
+ ++ + D +GDG IS ++ +V
Sbjct: 105 VGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG 144
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 66.2 bits (162), Expect = 8e-13
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+ EE L IF D NGDG + + +L + + G DS + V+++
Sbjct: 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGD-TVSDLDSSQIEAEVDHIL 93
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
Q ++D ++ G++ + +FV E+L F +D +G G I+
Sbjct: 94 Q------------SVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKIT 141
Query: 451 KDDLYNI 457
++L +
Sbjct: 142 NEELGRL 148
Score = 45.7 bits (109), Expect = 8e-06
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
++D ++ G++ + +FV E+L F +D +G G I+ ++L +
Sbjct: 93 LQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL 148
Score = 35.3 bits (82), Expect = 0.023
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 429 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 486
+ EE L IF D NGDG + + +L + + G DS + V+++
Sbjct: 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGD-TVSDLDSSQIEAEVDHIL 93
Query: 487 Q 487
Q
Sbjct: 94 Q 94
Score = 27.3 bits (61), Expect = 8.5
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 354
F D + +G + E+ + ++E + D N DG +
Sbjct: 129 FQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVD 175
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 65.4 bits (160), Expect = 1e-12
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 29/127 (22%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+ +F D N +G +S ++Y +++SV G+ + +
Sbjct: 34 INNHIKYINELFYKLDTNHNGSLSHREIYTVLASV--------------GIKKWDINRIL 79
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
Q LD N G + + +F+ + E L+ F D + DG IS
Sbjct: 80 Q------------ALDINDRGNITYTEFM-AGCYRWKNIESTFLKAAFNKIDKDEDGYIS 126
Query: 451 KDDLYNI 457
K D+ ++
Sbjct: 127 KSDIVSL 133
Score = 48.1 bits (115), Expect = 1e-06
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
LD N G + + +F+ + E L+ F D + DG ISK D+ ++
Sbjct: 79 LQALDINDRGNITYTEFM-AGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSL 133
Score = 46.1 bits (110), Expect = 5e-06
Identities = 26/153 (16%), Positives = 51/153 (33%), Gaps = 29/153 (18%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+F LD N G L+ + L+ + G ++ + I DIN G I+
Sbjct: 44 LFYKLDTNHNGSLSHREIYTVLASV--GIKKWDINRILQALDINDRGNIT---------- 91
Query: 365 VYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424
Y F +G + + FN +D ++ G+++ D V +
Sbjct: 92 ---------YTEFMAGCYRWKNI------ESTFLKAAFNKIDKDEDGYISKSDIVSLVH- 135
Query: 425 LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
+ + + F G+ + + I
Sbjct: 136 -DKVLDNNDIDNFFLSVHSIKKGIPREHIINKI 167
Score = 35.7 bits (83), Expect = 0.016
Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 429 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSV 461
+ +F D N +G +S ++Y +++SV
Sbjct: 34 INNHIKYINELFYKLDTNHNGSLSHREIYTVLASV 68
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 67.8 bits (166), Expect = 2e-12
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 18/124 (14%)
Query: 333 SEEE--KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
S+EE +L IF D NGDG + + +L Y + FD + V+ +
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQLDRQELI----DGYSKLSGEEVAVFDLPQIESEVDAIL 396
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
D ++ G++++ +FV ++KL F +D +G+G IS
Sbjct: 397 G------------AADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKIS 444
Query: 451 KDDL 454
D+L
Sbjct: 445 VDEL 448
Score = 54.7 bits (132), Expect = 4e-08
Identities = 23/157 (14%), Positives = 52/157 (33%), Gaps = 34/157 (21%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILC--------RGSEEEKLRWIFCLYDINGDGVISKD 356
+F +D N G L+ ++ + G S L E ++ I D + +G I
Sbjct: 351 IFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYID-- 408
Query: 357 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFE 416
Y F + + ++ + ++ F D + G ++ +
Sbjct: 409 -----------------YSEFVTVAMDRK-----SLLSKDKLESAFQKFDQDGNGKISVD 446
Query: 417 DFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+ + E + + + D N DG + ++
Sbjct: 447 ELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEE 481
Score = 51.6 bits (124), Expect = 4e-07
Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 32/150 (21%)
Query: 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHY------VFNTLDHNKTGFLNFEDFVKGLSILC 330
G + + Y+K + + + D ++ G++++ +FV
Sbjct: 361 GQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRK 420
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
++KL F +D +G+G IS D+L + G +S +
Sbjct: 421 SLLSKDKLESAFQKFDQDGNGKISVDELA-------SVFGLDH---LESKTWKE------ 464
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+ + +D N G ++FE+F K
Sbjct: 465 ----------MISGIDSNNDGDVDFEEFCK 484
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 63.4 bits (155), Expect = 6e-12
Identities = 21/130 (16%), Positives = 55/130 (42%), Gaps = 28/130 (21%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
++ + L+ F + D +G G I+K+ L E G + + L
Sbjct: 47 NDYDVEKLKSTFLVLDEDGKGYITKEQL----KKGLEKDGL---------KLPYNFDLLL 93
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ +D + +G +++ +F+ ++ + ++ + F ++D++ DG I+
Sbjct: 94 ------------DQIDSDGSGKIDYTEFIA-AALDRKQLSKKLIYCAFRVFDVDNDGEIT 140
Query: 451 KDDLYNIVSS 460
+L +I+ +
Sbjct: 141 TAELAHILYN 150
Score = 48.8 bits (117), Expect = 6e-07
Identities = 17/115 (14%), Positives = 50/115 (43%), Gaps = 20/115 (17%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
+ +D + +G +++ +F+ ++ + ++ + F ++D++ DG I+ +L +I
Sbjct: 93 LDQIDSDGSGKIDYTEFIA-AALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHI---- 147
Query: 366 YELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+ + + RV+ + + +D N G ++F +F +
Sbjct: 148 ---LYNGNKKGNITQRDVNRVKRMIR------------DVDKNNDGKIDFHEFSE 187
Score = 41.1 bits (97), Expect = 3e-04
Identities = 23/155 (14%), Positives = 44/155 (28%), Gaps = 39/155 (25%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
F LD + G++ E KGL G + + D +G G I
Sbjct: 57 TFLVLDEDGKGYITKEQLKKGLEKD--GLKLPYNFDLLLDQIDSDGSGKID--------- 105
Query: 364 SVYELMGTYAYRAFDSGMVAQRV---EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
Y F + + ++ + ++ F D + G + +
Sbjct: 106 ----------YTEFIAAALDRKQLSKKLIYC---------AFRVFDVDNDGEITTAELAH 146
Query: 421 -----GLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ +++ + D N DG I
Sbjct: 147 ILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKID 181
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 65.1 bits (158), Expect = 6e-12
Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 39/185 (21%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGS-----------EEEKLRWIFCLYDINGDGVI 353
+ D G L E+ + + I+ YD + G I
Sbjct: 62 FMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYI 121
Query: 354 SKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFL 413
S +L N + ++ + + Y + D NK G L
Sbjct: 122 SAAELKNFLKDLFLQHK----------------KKIPPNKLDEYTDAMMKIFDKNKDGRL 165
Query: 414 NFEDFVKGLSI------------LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 461
+ D + L++ + + IF YD++ G + ++ V +
Sbjct: 166 DLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDM 225
Query: 462 YELMG 466
EL+
Sbjct: 226 MELVR 230
Score = 56.2 bits (135), Expect = 5e-09
Identities = 27/166 (16%), Positives = 58/166 (34%), Gaps = 28/166 (16%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE--------EEKLRWIFCLYDINGDGVISKD 356
++ D + +G+++ + L L + +E + ++D N DG + +
Sbjct: 109 IWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLN 168
Query: 357 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFE 416
DL I++ + + A + E +F D ++TG L
Sbjct: 169 DLARILALQENFLLQFKMDASSQVERKRDFEKIFAH------------YDVSRTGALEGP 216
Query: 417 DFVKGLSILCR--------GSEEEKLRWIFCLYDINGDGVISKDDL 454
+ + + G ++ + D+N DG I K +L
Sbjct: 217 EVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSEL 262
Score = 53.9 bits (129), Expect = 3e-08
Identities = 19/145 (13%), Positives = 40/145 (27%), Gaps = 25/145 (17%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
+ I+ +D + +G I +L + + Q + +
Sbjct: 9 DAAGFLQIWQHFDADDNGYIEGKELDDFFRHM--------------LKKLQPKDKITDER 54
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGS-----------EEEKLRWIFCLYD 442
Q+ + D G L E+ + + I+ YD
Sbjct: 55 VQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYD 114
Query: 443 INGDGVISKDDLYNIVSSVYELMGT 467
+ G IS +L N + ++
Sbjct: 115 ADSSGYISAAELKNFLKDLFLQHKK 139
Score = 50.4 bits (120), Expect = 4e-07
Identities = 25/201 (12%), Positives = 64/201 (31%), Gaps = 31/201 (15%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEE----------EKLRWIFCLYDINGDGVIS 354
++ D + G++ ++ + + + + + YD DG +
Sbjct: 16 IWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQ 75
Query: 355 KDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLN 414
++L N++ E F ++ + D + +G+++
Sbjct: 76 IEELANMILPQEENFL----LIFRREAPLDNSVEFMKI---------WRKYDADSSGYIS 122
Query: 415 FEDFVKGLSILCRGSE--------EEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466
+ L L + +E + ++D N DG + +DL I++ +
Sbjct: 123 AAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLL 182
Query: 467 TYAYRAFDSGMVAQRVEYLFQ 487
+ A + E +F
Sbjct: 183 QFKMDASSQVERKRDFEKIFA 203
Score = 48.5 bits (115), Expect = 2e-06
Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 28/132 (21%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSI------------LCRGSEEEKLRWIFCLYDINGDGV 352
+ D NK G L+ D + L++ + + IF YD++ G
Sbjct: 153 MMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGA 212
Query: 353 ISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGF 412
+ ++ V + EL+ + G + + E L D NK G
Sbjct: 213 LEGPEVDGFVKDMMELVR----PSISGGDLDKFRECLLTHC------------DMNKDGK 256
Query: 413 LNFEDFVKGLSI 424
+ + L +
Sbjct: 257 IQKSELALCLGL 268
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 62.8 bits (153), Expect = 7e-12
Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 32/151 (21%)
Query: 333 SEEE--KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYA----------------- 373
S+ K++ F D + DG I++ D ++ + A
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 374 -----------YRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
F + M + + F +D N+ ++ +++
Sbjct: 61 LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 423 SILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+L G ++ F D N DG++S ++
Sbjct: 121 GML--GLDKTMAPASFDAIDTNNDGLLSLEE 149
Score = 40.5 bits (95), Expect = 3e-04
Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 429 SEEE--KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466
S+ K++ F D + DG I++ D ++ +
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESE 40
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 63.4 bits (155), Expect = 7e-12
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 26/127 (20%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+ E LR IF D++ G +S ++ + + + + +
Sbjct: 52 CDVEINNLRNIFIALDVDNSGTLSSQEILD------------GLKKIGYQKIPPDIHQVL 99
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ +D N +G +++ DF+ ++E F +DI+G+G IS
Sbjct: 100 R------------DIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKIS 147
Query: 451 KDDLYNI 457
++L I
Sbjct: 148 VEELKRI 154
Score = 45.7 bits (109), Expect = 9e-06
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
V +D N +G +++ DF+ ++E F +DI+G+G IS ++L I
Sbjct: 98 VLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRI 154
Score = 41.8 bits (99), Expect = 1e-04
Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 26/149 (17%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
F LD + +G L+ ++ + GL + + + D N G I
Sbjct: 63 FIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIH----------- 111
Query: 366 YELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDF--VKGLS 423
Y F + + ++ + F D + G ++ E+ + G
Sbjct: 112 --------YTDFLAATIDKQ-----TYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRD 158
Query: 424 ILCRGSEEEKLRWIFCLYDINGDGVISKD 452
+ ++ + + D+NGDG I
Sbjct: 159 DIENPLIDKAIDSLLQEVDLNGDGEIDFH 187
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 66.3 bits (162), Expect = 8e-12
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
E ++L IF D NGDG + K +L Y ++ + + V + V+ + +
Sbjct: 353 ERKELTDIFKKLDKNGDGQLDKKEL----IEGYNVLRNFKNELGELKNVEEEVDNILK-- 406
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+D +K G++ + +F+ EE+LR F L+D + G I+K++
Sbjct: 407 ----------EVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEE 456
Query: 454 L 454
L
Sbjct: 457 L 457
Score = 54.7 bits (132), Expect = 3e-08
Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 34/154 (22%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE--------EEKLRWIFCLYDINGDGVISKD 356
+F LD N G L+ ++ ++G ++L EE++ I D + +G I
Sbjct: 360 IFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIE-- 417
Query: 357 DLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFE 416
Y F S + ++ + ++ FN D +K+G + E
Sbjct: 418 -----------------YSEFISVCMDKQ-----ILFSEERLRRAFNLFDTDKSGKITKE 455
Query: 417 DFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ + E+ + D N D +I
Sbjct: 456 ELANLFGL--TSISEKTWNDVLGEADQNKDNMID 487
Score = 51.2 bits (123), Expect = 5e-07
Identities = 26/150 (17%), Positives = 51/150 (34%), Gaps = 32/150 (21%)
Query: 277 GTIRQDTFKGIYAKFFPCGTSSYRY------AHYVFNTLDHNKTGFLNFEDFVKGLSILC 330
G + + Y + +D +K G++ + +F+
Sbjct: 370 GQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQ 429
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
EE+LR F L+D + G I+K++L L G +
Sbjct: 430 ILFSEERLRRAFNLFDTDKSGKITKEELA-------NLFGLTSI---------------- 466
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+++ + V D NK ++F++FV
Sbjct: 467 ---SEKTWNDVLGEADQNKDNMIDFDEFVS 493
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 65.9 bits (161), Expect = 9e-12
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 333 SEEE--KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
S++E +L IF D NGDG + + +L + + G A D+ V V+ +
Sbjct: 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDA-SMLDASAVEHEVDQVL 388
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+D +K G++ + +FV E+L F ++D + G IS
Sbjct: 389 D------------AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKIS 436
Query: 451 KDDL 454
+L
Sbjct: 437 STEL 440
Score = 52.8 bits (127), Expect = 2e-07
Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 37/160 (23%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE-----------EEKLRWIFCLYDINGDGVI 353
+F+ +D N G L+ + ++G L R E ++ + D + +G I
Sbjct: 340 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYI 399
Query: 354 SKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFL 413
Y F + + ++ + ++ F D + +G +
Sbjct: 400 E-------------------YSEFVTVAMDRK-----TLLSRERLERAFRMFDSDNSGKI 435
Query: 414 NFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+ + + E + + D N DG + D+
Sbjct: 436 SSTELATIFG--VSDVDSETWKSVLSEVDKNNDGEVDFDE 473
Score = 50.8 bits (122), Expect = 6e-07
Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 35/153 (22%)
Query: 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHY---------VFNTLDHNKTGFLNFEDFVKGLS 327
G + + Y + V + +D +K G++ + +FV
Sbjct: 350 GQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAM 409
Query: 328 ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVE 387
E+L F ++D + G IS +L + G
Sbjct: 410 DRKTLLSRERLERAFRMFDSDNSGKISSTELA-------TIFGVSDV------------- 449
Query: 388 YLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
V + +D N G ++F++F +
Sbjct: 450 ------DSETWKSVLSEVDKNNDGEVDFDEFQQ 476
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 65.2 bits (159), Expect = 9e-12
Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 38/161 (23%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEK--LRWIFCLYDINGDGVISKDDLYNIV 362
+ L+ + +G+ LS EE+ LR +F ++G G S DL
Sbjct: 95 LLKDLEDDASGYNRLRPSKPMLS------EEDTNILRQLFLSSAVSGSGKFSFQDLKQ-- 146
Query: 363 SSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
+ + ++ LF ++++ G +++ V +
Sbjct: 147 ----------VLAKYADTIPEGPLKKLFV------------MVENDTKGRMSYITLVA-V 183
Query: 423 SILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463
+ + L F D N +G +S+ + +
Sbjct: 184 AN-----DLAALVADFRKIDTNSNGTLSRKEFREHFVRLGF 219
Score = 63.3 bits (154), Expect = 3e-11
Identities = 26/157 (16%), Positives = 64/157 (40%), Gaps = 15/157 (9%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+F + + +G +F+D + L+ E L+ +F + + + G +S L + +
Sbjct: 127 LFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVAND 186
Query: 365 VYELMGTYAYRAFD---SGMVA----QRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFED 417
+ L+ +R D +G ++ + + +F D +++ + F +
Sbjct: 187 LAALVA--DFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSE 244
Query: 418 FVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
+V L LR ++ D + G +SK+++
Sbjct: 245 YVH----LGL--CLLVLRILYAFADFDKSGQLSKEEV 275
Score = 51.3 bits (123), Expect = 3e-07
Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 28/163 (17%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL------ 358
+F ++++ G +++ V ++ + L F D N +G +S+ +
Sbjct: 163 LFVMVENDTKGRMSYITLVA-VAN-----DLAALVADFRKIDTNSNGTLSRKEFREHFVR 216
Query: 359 --YNIVSSVYELMGTYAYRAFD---SGMVAQR--VEYLFQVSTQRYAHYVFNTLDHNKTG 411
++ S L R D S V V + R + D +K+G
Sbjct: 217 LGFDKKSVQDALF-----RYADEDESDDVGFSEYVHLGLCLLVLRIL---YAFADFDKSG 268
Query: 412 FLNFEDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDD 453
L+ E+ K L S +K F + D++ +S +
Sbjct: 269 QLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQE 311
Score = 46.0 bits (109), Expect = 2e-05
Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 32/144 (22%)
Query: 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEE 336
GT+ + F+ + + G +F D +++ + F ++V L
Sbjct: 203 GTLSRKEFREHFVRL---GFDKKSVQDALFRYADEDESDDVGFSEYVH----LGL--CLL 253
Query: 337 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQR 396
LR ++ D + G +SK+++ + +
Sbjct: 254 VLRILYAFADFDKSGQLSKEEVQKV-------LEDAHIPESARKKFEH------------ 294
Query: 397 YAHYVFNTLDHNKTGFLNFEDFVK 420
F+ +D + + L++++FV
Sbjct: 295 ----QFSVVDVDDSKSLSYQEFVM 314
Score = 44.0 bits (104), Expect = 6e-05
Identities = 18/152 (11%), Positives = 46/152 (30%), Gaps = 13/152 (8%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
+E++ + YD + + S + +
Sbjct: 49 KEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYNR 108
Query: 394 TQRYAHY-----------VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYD 442
+ +F + + +G +F+D + L+ E L+ +F + +
Sbjct: 109 LRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVE 168
Query: 443 INGDGVISKDDLYNIVSSVYELMGTYAYRAFD 474
+ G +S L + + + L+ +R D
Sbjct: 169 NDTKGRMSYITLVAVANDLAALVA--DFRKID 198
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 62.2 bits (151), Expect = 2e-11
Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 19/131 (14%)
Query: 334 EEEKLRWIF-CLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+ K+ +F YD N DGVI DD + + L G
Sbjct: 10 QRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPT-----DGKKHNEARATL-- 62
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEK---------LRWIFCLYDI 443
+ + D N+ + E+++K + + E+ + + ++F + D
Sbjct: 63 --KLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120
Query: 444 NGDGVISKDDL 454
+GD +I K +
Sbjct: 121 SGDNIIDKHEY 131
Score = 56.4 bits (136), Expect = 2e-09
Identities = 20/166 (12%), Positives = 51/166 (30%), Gaps = 33/166 (19%)
Query: 303 HYVFNTL-DHNKTGFLNFEDFVKGLSILCR------GSEEEK---------LRWIFCLYD 346
VFNT D N G + ++DF + +C ++ + D
Sbjct: 15 LRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYAD 74
Query: 347 INGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLD 406
N D ++K++ + + + +Y +++F+ D
Sbjct: 75 ENEDEQVTKEEWLK---------------MWAECVKSVEKGESLPEWLTKYMNFMFDVND 119
Query: 407 HNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
+ ++ ++ G + F G +++++
Sbjct: 120 TSGDNIIDKHEYSTVYMSY--GIPKSDCDAAFDTLSDGGKTMVTRE 163
Score = 40.2 bits (94), Expect = 5e-04
Identities = 6/57 (10%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 300 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 356
+Y +++F+ D + ++ ++ G + F G +++++
Sbjct: 109 KYMNFMFDVNDTSGDNIIDKHEYSTVYMSY--GIPKSDCDAAFDTLSDGGKTMVTRE 163
Score = 34.8 bits (80), Expect = 0.027
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 430 EEEKLRWIF-CLYDINGDGVISKDDLYNIVSSVYELMGT 467
+ K+ +F YD N DGVI DD + + L
Sbjct: 10 QRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSW 48
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 62.5 bits (152), Expect = 2e-11
Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 26/132 (19%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
+L F +D++ DG + D++ + +L+ A D + R
Sbjct: 34 MLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVN-----ATDEQVEKMRDAV----- 83
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG-----------SEEEKLRWIFCLYD 442
F L ED+V+ + + + D
Sbjct: 84 -----RVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLD 138
Query: 443 INGDGVISKDDL 454
+GDG + D+L
Sbjct: 139 DDGDGTVDVDEL 150
Score = 54.8 bits (132), Expect = 7e-09
Identities = 17/157 (10%), Positives = 47/157 (29%), Gaps = 24/157 (15%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE---------EEKLRWIFCLYDINGDGVISK 355
F+T D + G + ++ + + + + +R F + + +
Sbjct: 41 RFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLR 100
Query: 356 DDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNF 415
+D E +A +R ++ ++ LD + G ++
Sbjct: 101 EDW-------VEANRVFA------EAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDV 147
Query: 416 EDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
++ + +E F D + G + +
Sbjct: 148 DELKTMMKAF--DVPQEAAYTFFEKADTDKSGKLERT 182
Score = 39.8 bits (93), Expect = 0.001
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 466
+L F +D++ DG + D++ + +L+
Sbjct: 34 MLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVN 70
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 64.3 bits (157), Expect = 3e-11
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSG--MVAQRVEYLFQ 391
E ++L IF D N DG++ +D+L L G + + + +++ L
Sbjct: 329 ETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMP 388
Query: 392 VSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISK 451
LD + +G + + +F+ E++ F ++D +G G IS
Sbjct: 389 ------------LLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKIST 436
Query: 452 DDLYNIVS 459
+L+ + S
Sbjct: 437 KELFKLFS 444
Score = 56.2 bits (136), Expect = 1e-08
Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 38/163 (23%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE--------------EEKLRWIFCLYDINGD 350
+F LD N G L+ ++ V+G R E+++ + L D++G
Sbjct: 336 IFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGS 395
Query: 351 GVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKT 410
G I Y F + + + + ++ F D + +
Sbjct: 396 GSIE-------------------YSEFIASAIDRT-----ILLSRERMERAFKMFDKDGS 431
Query: 411 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
G ++ ++ K S + E+L I D N DG + ++
Sbjct: 432 GKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNE 474
Score = 50.1 bits (120), Expect = 1e-06
Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 36/156 (23%)
Query: 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHY------------VFNTLDHNKTGFLNFEDFVK 324
G + +D Y +F + LD + +G + + +F+
Sbjct: 346 GMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIA 405
Query: 325 GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQ 384
E++ F ++D +G G IS +L+ + S A + +
Sbjct: 406 SAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQ--------ADSSIQMEELES 457
Query: 385 RVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+ +D+NK G ++F +FV+
Sbjct: 458 ----------------IIEQVDNNKDGEVDFNEFVE 477
Score = 34.3 bits (79), Expect = 0.078
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSG--MVAQRVEYLFQ 487
E ++L IF D N DG++ +D+L L G + + + +++ L
Sbjct: 329 ETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMP 388
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 60.6 bits (148), Expect = 3e-11
Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 26/124 (20%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
SEEE L+ +F + D + G I+ ++L + + + + L
Sbjct: 22 SEEEIAGLKEMFNMIDADKSGQITFEEL-----------KA-GLKRVGANLKESEILDLM 69
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
D + +G +++++F+ L + E+ L F +D +G G I+
Sbjct: 70 ------------QAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYIT 117
Query: 451 KDDL 454
D+L
Sbjct: 118 PDEL 121
Score = 44.0 bits (105), Expect = 2e-05
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
D + +G +++++F+ L + E+ L F +D +G G I+ D+L
Sbjct: 69 MQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDEL 121
Score = 38.7 bits (91), Expect = 0.001
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 30/148 (20%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+FN +D +K+G + FE+ GL + +E ++ + D++ G I
Sbjct: 32 MFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTID---------- 81
Query: 365 VYE--LMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
Y+ + T + ++LF F D + +G++ ++ +
Sbjct: 82 -YKEFIAATLHLNKIER------EDHLFA---------AFTYFDKDGSGYITPDELQQAC 125
Query: 423 SILCRGSEEEKLRWIFCLYDINGDGVIS 450
G E+ ++ + D + DG I
Sbjct: 126 EEF--GVEDVRIEELMRDVDQDNDGRID 151
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 60.3 bits (146), Expect = 1e-10
Identities = 18/127 (14%), Positives = 48/127 (37%), Gaps = 14/127 (11%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
+++ +F +D N G + D++Y+ V +L + ++
Sbjct: 46 AKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFT--------------SRVRDIT 91
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+ + G +F +F++ +LC + +L +F D +G+ ++ +++
Sbjct: 92 KRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEE 151
Query: 454 LYNIVSS 460
V
Sbjct: 152 FKRAVPK 158
Score = 47.6 bits (113), Expect = 2e-06
Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 23/111 (20%)
Query: 310 DHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 369
G +F +F++ +LC + +L +F D +G+ ++ +++ V +
Sbjct: 104 KLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKL---- 159
Query: 370 GTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
+VE +F LD N TG + F++F
Sbjct: 160 ----------EAWGAKVEDPAA---------LFKELDKNGTGSVTFDEFAA 191
Score = 30.6 bits (69), Expect = 0.88
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGT 467
+++ +F +D N G + D++Y+ V +L
Sbjct: 46 AKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEF 83
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 59.2 bits (143), Expect = 2e-10
Identities = 21/131 (16%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 334 EEEKLRWIF-CLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+++K+++ F D+N DG I +D ++++ E+ G ++ Q
Sbjct: 6 QKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNK---------GSLSDADYKSMQA 56
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEK---------LRWIFCLYDI 443
S + + D NK +++E+++ + + ++F D+
Sbjct: 57 SLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDV 116
Query: 444 NGDGVISKDDL 454
+GDG++ ++
Sbjct: 117 SGDGIVDLEEF 127
Score = 58.8 bits (142), Expect = 3e-10
Identities = 22/167 (13%), Positives = 48/167 (28%), Gaps = 33/167 (19%)
Query: 303 HYVFNT-LDHNKTGFLNFEDFVKGLSILCR------GSEEEK---------LRWIFCLYD 346
+ F+ LD N G + DF ++ + K R + D
Sbjct: 11 KFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRAD 70
Query: 347 INGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLD 406
IN D V+S ++ + + + Q ++F +D
Sbjct: 71 INKDDVVSWEEYLAMWEKT---------------IATCKSVADLPAWCQNRIPFLFKGMD 115
Query: 407 HNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+ G ++ E+F + + ++ + G +
Sbjct: 116 VSGDGIVDLEEFQNYCKNF--QLQCADVPAVYNVITDGGKVTFDLNR 160
Score = 40.7 bits (95), Expect = 3e-04
Identities = 6/58 (10%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 300 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 357
++F +D + G ++ E+F + + ++ + G +
Sbjct: 105 NRIPFLFKGMDVSGDGIVDLEEFQNYCKNF--QLQCADVPAVYNVITDGGKVTFDLNR 160
Score = 36.1 bits (83), Expect = 0.013
Identities = 9/38 (23%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 430 EEEKLRWIF-CLYDINGDGVISKDDLYNIVSSVYELMG 466
+++K+++ F D+N DG I +D ++++ E+
Sbjct: 6 QKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNK 43
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 58.9 bits (143), Expect = 2e-10
Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 25/128 (19%)
Query: 328 ILCRGSEE-EKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRV 386
L RG+ + L F D +G + D+ +
Sbjct: 28 CLSRGASGIQGLARFFRQLDRDGSRSLDADEF------------RQGLAKLGLVLDQAEA 75
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGD 446
E + D N +G L+ E+F++ L + E + F D +GD
Sbjct: 76 EGVC------------RKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGD 123
Query: 447 GVISKDDL 454
GV++ DDL
Sbjct: 124 GVVTVDDL 131
Score = 49.3 bits (118), Expect = 6e-07
Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 35/167 (20%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
F LD + + L+ ++F +GL+ L ++ + + +D NG G + ++ +
Sbjct: 42 FFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRP 101
Query: 365 VYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS- 423
M R + F LD + G + +D S
Sbjct: 102 P---------------MSQAREAVIAA---------AFAKLDRSGDGVVTVDDLRGVYSG 137
Query: 424 ------ILCRGSEEEKLRWIFCLYDIN-GDGVISKD---DLYNIVSS 460
+E+E LR +D + DG ++ D Y+ VS+
Sbjct: 138 RAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSA 184
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 57.6 bits (140), Expect = 6e-10
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 26/124 (20%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
SEEE L+ +F + D + G I+ D+L + S ++ ++ L
Sbjct: 5 SEEEIGGLKELFKMIDTDNSGTITFDEL-----------KD-GLKRVGSELMESEIKDLM 52
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ D +K+G +++ +F+ L + EE L F +D +G G I+
Sbjct: 53 ------------DAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYIT 100
Query: 451 KDDL 454
D++
Sbjct: 101 LDEI 104
Score = 51.5 bits (124), Expect = 7e-08
Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 34/152 (22%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366
+ D +K+G +++ +F+ L + EE L F +D +G G I+ D++
Sbjct: 53 DAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDF- 111
Query: 367 ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS--I 424
G+ + + +D + G +++ +F +
Sbjct: 112 -------------GL------------DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK 146
Query: 425 LCRGSEEEKLRWI------FCLYDINGDGVIS 450
G +R L D + VI
Sbjct: 147 GNGGIGRRTMRKTLNLRDALGLVDNGSNQVIE 178
Score = 28.0 bits (63), Expect = 5.4
Identities = 8/52 (15%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 357
F+ D + +G++ ++ + G ++ + + D + DG I +
Sbjct: 88 FSYFDKDGSGYITLDEIQQACKDF--GLDDIHIDDMIKEIDQDNDGQIDYGE 137
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 53.7 bits (130), Expect = 8e-10
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+F +D N G +++E+ +S E+ L+ IF D +G+G I +++ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 365 V 365
+
Sbjct: 65 I 65
Score = 53.7 bits (130), Expect = 8e-10
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
+F +D N G +++E+ +S E+ L+ IF D +G+G I +++ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 461 V 461
+
Sbjct: 65 I 65
Score = 32.5 bits (75), Expect = 0.030
Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 24/88 (27%)
Query: 338 LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRY 397
+F D+NGDG +S +++ + Q ++ +F+
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKA------------FVSKKRAIKNEQLLQLIFKS----- 44
Query: 398 AHYVFNTLDHNKTGFLNFEDFVKGLSIL 425
+D + G ++ +F K +
Sbjct: 45 -------IDADGNGEIDQNEFAKFYGSI 65
Score = 26.8 bits (60), Expect = 3.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 434 LRWIFCLYDINGDGVISKDDL 454
+F D+NGDG +S +++
Sbjct: 2 AEALFKEIDVNGDGAVSYEEV 22
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 56.0 bits (136), Expect = 9e-10
Identities = 20/123 (16%), Positives = 50/123 (40%), Gaps = 27/123 (21%)
Query: 338 LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRY 397
+F D+NGDG +S +++ + Q ++ +F
Sbjct: 2 AEALFKEIDVNGDGAVSYEEV-----------KA-FVSKKRAIKNEQLLQLIF------- 42
Query: 398 AHYVFNTLDHNKTGFLNFEDFVKGLSILCR---GSEEEKLRWIFCLYDINGDGVISKDDL 454
++D + G ++ +F K + ++ L+ ++ L D++GDG ++K+++
Sbjct: 43 -----KSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV 97
Query: 455 YNI 457
+
Sbjct: 98 TSF 100
Score = 43.3 bits (103), Expect = 2e-05
Identities = 12/59 (20%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCR---GSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
F ++D + G ++ +F K + ++ L+ ++ L D++GDG ++K+++ +
Sbjct: 42 FKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSF 100
Score = 41.7 bits (99), Expect = 6e-05
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 25/146 (17%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+F +D N G +++E+ +S E+ L+ IF D +G+G I +++ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 365 VYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424
+ + L ++ +D + G L E+ ++
Sbjct: 65 IQGQDLS------------DDKIGLKV---------LYKLMDVDGDGKLTKEE----VTS 99
Query: 425 LCRGSEEEKLRWIFCLYDINGDGVIS 450
+ EK+ D NGDG I+
Sbjct: 100 FFKKHGIEKVAEQVMKADANGDGYIT 125
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 54.9 bits (133), Expect = 4e-09
Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 36/144 (25%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366
+ D +NF +F + + + +F YD + G+I K++L +S
Sbjct: 51 SMFDRENKAGVNFSEFTG----VWK--YITDWQNVFRTYDRDNSGMIDKNELKQALSG-- 102
Query: 367 ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 426
G +++S Q + + D G + F+DF++G +L
Sbjct: 103 --FG-------------------YRLSDQFH-DILIRKFDRQGRGQIAFDDFIQGCIVL- 139
Query: 427 RGSEEEKLRWIFCLYDINGDGVIS 450
++L IF YD + DG I
Sbjct: 140 -----QRLTDIFRRYDTDQDGWIQ 158
Score = 46.8 bits (112), Expect = 2e-06
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 29/127 (22%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
++ L +F D + GVIS +L +S+ + F+ V +
Sbjct: 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNG-------TWTPFNPVTVRSII------- 50
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+ D +NF +F + + + +F YD + G+I K++
Sbjct: 51 ---------SMFDRENKAGVNFSEFTG----VWK--YITDWQNVFRTYDRDNSGMIDKNE 95
Query: 454 LYNIVSS 460
L +S
Sbjct: 96 LKQALSG 102
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 53.8 bits (129), Expect = 5e-09
Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
S +E F ++D +G+ ++ +L ++ V++ G+ + ++
Sbjct: 65 SPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIID----- 119
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
V D N G++++ +F K L
Sbjct: 120 -------GVLRDDDKNNDGYIDYAEFAKSL 142
Score = 40.3 bits (94), Expect = 2e-04
Identities = 8/59 (13%), Positives = 26/59 (44%)
Query: 429 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 487
S +E F ++D +G+ ++ +L ++ V++ G+ + ++ + +
Sbjct: 65 SPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLR 123
Score = 28.8 bits (64), Expect = 2.0
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGL 326
V D N G++++ +F K L
Sbjct: 121 VLRDDDKNNDGYIDYAEFAKSL 142
Score = 28.4 bits (63), Expect = 2.7
Identities = 9/63 (14%), Positives = 20/63 (31%), Gaps = 12/63 (19%)
Query: 304 YVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRW------------IFCLYDINGDG 351
+ F D++ L+ + ++ + + E+ + D N DG
Sbjct: 72 HYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDG 131
Query: 352 VIS 354
I
Sbjct: 132 YID 134
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 53.5 bits (129), Expect = 1e-08
Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 36/144 (25%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366
+ D N +G + F++F L +R F D +GDG + +++ + S
Sbjct: 70 HMYDKNHSGEITFDEFKD----LHH--FILSMREGFRKRDSSGDGRLDSNEVRAALLS-- 121
Query: 367 ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 426
G +QVS Q + + D + G L F+D+V+ +
Sbjct: 122 --SG-------------------YQVSEQTFQA-LMRKFDRQRRGSLGFDDYVELSIFV- 158
Query: 427 RGSEEEKLRWIFCLYDINGDGVIS 450
++R +F YD G ++
Sbjct: 159 -----CRVRNVFAFYDRERTGQVT 177
Score = 44.2 bits (105), Expect = 2e-05
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 30/127 (23%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
+ ++L F D +G G IS +L +SS G F + +
Sbjct: 25 DNQELMEWFRAVDTDGSGAISVPELNAALSS----AGV----PFSLATTEKLL------- 69
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+ D N +G + F++F L +R F D +GDG + ++
Sbjct: 70 ---------HMYDKNHSGEITFDEFKD----LHH--FILSMREGFRKRDSSGDGRLDSNE 114
Query: 454 LYNIVSS 460
+ + S
Sbjct: 115 VRAALLS 121
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 52.9 bits (127), Expect = 3e-08
Identities = 19/156 (12%), Positives = 47/156 (30%), Gaps = 35/156 (22%)
Query: 333 SEEE--KLRWIFCLYDINGDGVISKDDLYNIVSSVY-----------ELM---------- 369
+ + + +F D+N +G IS D++ S + +
Sbjct: 11 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGG 70
Query: 370 -GTYAYRAFD-----------SGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFED 417
G D + ++ + + +F+ +D ++ G + ++
Sbjct: 71 AGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDE 130
Query: 418 FVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+ E F + DI+ G + D+
Sbjct: 131 WKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
Score = 38.2 bits (89), Expect = 0.002
Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 429 SEEE--KLRWIFCLYDINGDGVISKDDLYNIVSSV 461
+ + + +F D+N +G IS D++ S +
Sbjct: 11 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDI 45
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 52.5 bits (127), Expect = 3e-08
Identities = 27/150 (18%), Positives = 55/150 (36%), Gaps = 31/150 (20%)
Query: 307 NTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
N +D + G ++F +F+ + SEEE +R F ++D +G+G IS +L +++++
Sbjct: 54 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-IREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 365 VYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFV----K 420
+ E + T + D + G +N+E+FV
Sbjct: 113 LGEKL------------------------TDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Query: 421 GLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ +E +R
Sbjct: 149 KGGGGGAAARKEVIRNKIRAIGKMARVFSV 178
Score = 49.8 bits (120), Expect = 2e-07
Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 47/135 (34%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSS---------VYELMGTYAYRAFDSGM 381
+EE+ + F L+D +GDG I+ +L ++ S + +++
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI------------ 53
Query: 382 VAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFC 439
N +D + G ++F +F+ + SEEE +R F
Sbjct: 54 ---------------------NEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-IREAFR 91
Query: 440 LYDINGDGVISKDDL 454
++D +G+G IS +L
Sbjct: 92 VFDKDGNGYISAAEL 106
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 51.8 bits (125), Expect = 4e-08
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 29/126 (23%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
EE+K + F L+D+N DG + +L + + +G
Sbjct: 18 LEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA----LG-------------------- 53
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGV 448
+R + + D + ++DF G IL R +E ++ F L+D + G
Sbjct: 54 FELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDE-IKRAFQLFDDDHTGK 112
Query: 449 ISKDDL 454
IS +L
Sbjct: 113 ISIKNL 118
Score = 42.5 bits (101), Expect = 6e-05
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 307 NTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ D + ++DF G IL R +E ++ F L+D + G IS +L
Sbjct: 66 DEYDSEGRHLMKYDDFYIVMGEKILKRDPLDE-IKRAFQLFDDDHTGKISIKNL 118
Score = 33.3 bits (77), Expect = 0.081
Identities = 33/165 (20%), Positives = 65/165 (39%), Gaps = 41/165 (24%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE--EEKLRWIFCLYDINGDGVISKDDLYNIV 362
F+ D N GFL++ + + L G E + ++ + YD G ++ DD Y ++
Sbjct: 28 AFSLFDMNNDGFLDYHELKVAMKAL--GFELPKREILDLIDEYDSEGRHLMKYDDFYIVM 85
Query: 363 SSVY-------ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNF 415
E+ RAF +F D + TG ++
Sbjct: 86 GEKILKRDPLDEIK-----RAFQ----------------------LF---DDDHTGKISI 115
Query: 416 EDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
++ + L +E+LR + +D++GDG I++++ I +
Sbjct: 116 KNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 51.3 bits (124), Expect = 4e-08
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 47/135 (34%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSS---------VYELMGTYAYRAFDSGM 381
+EE+K +R F L+D +G G I +L + + + +++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMI------------ 48
Query: 382 VAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFC 439
+ +D TG +NF DF+ + + ++EE + F
Sbjct: 49 ---------------------SEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE-ILKAFK 86
Query: 440 LYDINGDGVISKDDL 454
L+D + G IS +L
Sbjct: 87 LFDDDETGKISFKNL 101
Score = 41.7 bits (99), Expect = 9e-05
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 307 NTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ +D TG +NF DF+ + + ++EE + F L+D + G IS +L
Sbjct: 49 SEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE-ILKAFKLFDDDETGKISFKNL 101
Score = 28.6 bits (65), Expect = 2.7
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363
F D ++TG ++F++ + L +E+L+ + D +GDG +S+ + I+
Sbjct: 85 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 54.1 bits (130), Expect = 5e-08
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 312 NKTGFLNFEDFVKGLSILCRGSEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELM 369
+ N + + +EE+ + F L+D +GDG I+ +L ++ S +
Sbjct: 286 DFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS----L 341
Query: 370 GTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS--ILCR 427
G Q T+ + N +D + G ++F +F+ ++ +
Sbjct: 342 G--------------------QNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 381
Query: 428 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYE 463
SEEE +R F ++D +G+G IS +L ++++++ E
Sbjct: 382 DSEEE-IREAFRVFDKDGNGYISAAELRHVMTNLGE 416
Score = 43.0 bits (101), Expect = 2e-04
Identities = 18/63 (28%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 307 NTLDHNKTGFLNFEDFVKGLS--ILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
N +D + G ++F +F+ ++ + SEEE +R F ++D +G+G IS +L +++++
Sbjct: 355 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-IREAFRVFDKDGNGYISAAELRHVMTN 413
Query: 365 VYE 367
+ E
Sbjct: 414 LGE 416
Score = 35.6 bits (82), Expect = 0.034
Identities = 25/166 (15%), Positives = 63/166 (37%), Gaps = 39/166 (23%)
Query: 303 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 362
F+ D + G + ++ + L + E +L+ + D +G+G I + ++
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 374
Query: 363 SSVY-------ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNF 415
+ E+ AF VF D + G+++
Sbjct: 375 ARKMKDTDSEEEIR-----EAFR----------------------VF---DKDGNGYISA 404
Query: 416 EDFVKGLSIL-CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
+ ++ L + ++EE + + DI+GDG ++ ++ ++++
Sbjct: 405 AELRHVMTNLGEKLTDEE-VDEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 34.1 bits (78), Expect = 0.091
Identities = 14/129 (10%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 336 EKLRWIFCLYDINGDGVISKDDLYNIVSS-VYELM-GTYAYRAFDSGMVAQRVEYLF-QV 392
E ++ + ++ ++ + V + ++ + + + Q+
Sbjct: 247 EGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQL 306
Query: 393 STQRYAHY--VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+ ++ A + F+ D + G + ++ + L + E +L+ + D +G+G I
Sbjct: 307 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 366
Query: 451 KDDLYNIVS 459
+ +++
Sbjct: 367 FPEFLTMMA 375
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 49.8 bits (120), Expect = 1e-07
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 49/138 (35%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSS---------VYELMGTYAYRAFDSGM 381
EE LR F +D + DG I+ DL N + + + EL
Sbjct: 6 RPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELS------------ 53
Query: 382 VAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFV-----KGLSILCRGSEEEKLRW 436
++ N G ++F+DFV K L+ ++LR
Sbjct: 54 ---------------------QQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRD 92
Query: 437 IFCLYDINGDGVISKDDL 454
F +D NGDG IS +L
Sbjct: 93 AFREFDTNGDGEISTSEL 110
Score = 39.4 bits (93), Expect = 6e-04
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 307 NTLDHNKTGFLNFEDFV-----KGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
++ N G ++F+DFV K L+ ++LR F +D NGDG IS +L
Sbjct: 54 QQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 110
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 50.5 bits (121), Expect = 2e-07
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 27/135 (20%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+ + +F DING+G I+ D++ + S + ++ +
Sbjct: 15 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDD--IC-----AKLEATPEQTKRH--- 64
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE-----------EEKLRWIFC 439
Q F + F F+ G L E +F
Sbjct: 65 ----QVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFD 120
Query: 440 LYDINGDGVISKDDL 454
++D +G G I+ D+
Sbjct: 121 IFDKDGSGTITLDEW 135
Score = 36.6 bits (85), Expect = 0.009
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 429 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSV 461
+ + +F DING+G I+ D++ + S
Sbjct: 15 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDD 49
Score = 36.3 bits (84), Expect = 0.011
Identities = 19/146 (13%), Positives = 34/146 (23%), Gaps = 37/146 (25%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSE-----------EEKLRWIFCLYDINGDGVIS 354
F + F F+ G L E +F ++D +G G I+
Sbjct: 72 FRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTIT 131
Query: 355 KDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLN 414
D+ +Q F D + G L+
Sbjct: 132 LDEWKAYGKISGISP------------------------SQEDCEATFRHCDLDNAGDLD 167
Query: 415 FEDFVKGLS--ILCRGSEEEKLRWIF 438
++ + E + L
Sbjct: 168 VDEMTRQHLGFWYTLDPEADGLYGNG 193
Score = 33.6 bits (77), Expect = 0.077
Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 15/152 (9%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGS-----EEEKLRWIFCLYDINGDGVISKDDL- 358
+F+ LD N G + ++ V S E+ K + G G+ ++
Sbjct: 25 MFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIA 84
Query: 359 YNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDF 418
+ + + + A R E F+ D + +G + +++
Sbjct: 85 FP------QFLDGWKQLATSELKKWARNEPTLIREWGDAV---FDIFDKDGSGTITLDEW 135
Query: 419 VKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
I +E F D++ G +
Sbjct: 136 KAYGKISGISPSQEDCEATFRHCDLDNAGDLD 167
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 49.9 bits (120), Expect = 2e-07
Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 48/137 (35%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSS---------VYELMGTYAYRAFDSGM 381
SEE + F ++D +G G IS +L ++ + ++
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII------------ 62
Query: 382 VAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFV----KGLSILCRGSEEEKLRWI 437
+D + +G ++FE+F+ + + +G EE+L
Sbjct: 63 ---------------------EEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANC 101
Query: 438 FCLYDINGDGVISKDDL 454
F ++D N DG I ++L
Sbjct: 102 FRIFDKNADGFIDIEEL 118
Score = 40.6 bits (96), Expect = 2e-04
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 307 NTLDHNKTGFLNFEDFV----KGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+D + +G ++FE+F+ + + +G EE+L F ++D N DG I ++L
Sbjct: 63 EEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEEL 118
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 49.9 bits (120), Expect = 2e-07
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 32/126 (25%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
E E + F + D N DG+I KDDL + A G + + E L
Sbjct: 20 DETEIEDFKEAFTVIDQNADGIIDKDDL-----------RE-TFAAM--GRLNVKNEEL- 64
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGV 448
+ + +G +NF F+ G + E+ + F + D +G G
Sbjct: 65 ------------DAMIKEASGPINFTVFLTMFGEKLKGADPEDV-IMGAFKVLDPDGKGS 111
Query: 449 ISKDDL 454
I K L
Sbjct: 112 IKKSFL 117
Score = 42.2 bits (100), Expect = 8e-05
Identities = 17/127 (13%), Positives = 41/127 (32%), Gaps = 30/127 (23%)
Query: 309 LDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366
+ +G +NF F+ G + E+ + F + D +G G I K L ++++
Sbjct: 67 MIKEASGPINFTVFLTMFGEKLKGADPEDV-IMGAFKVLDPDGKGSIKKSFLEELLTTGG 125
Query: 367 ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 426
T ++ + G +++++ ++
Sbjct: 126 GRF------------------------TPEEIKNMWAAFPPDVAGNVDYKNICY---VIT 158
Query: 427 RGSEEEK 433
G + E
Sbjct: 159 HGEDAEG 165
Score = 29.1 bits (66), Expect = 2.0
Identities = 7/58 (12%), Positives = 24/58 (41%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363
F LD + G + + L+ E+++ ++ + + G + ++ +++
Sbjct: 101 FKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 158
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 142
Score = 49.0 bits (118), Expect = 2e-07
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 29/125 (23%)
Query: 334 EEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 391
+++ + F L+D G I+K+ L +V + G
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGL----QTVLKQFG--------------------V 37
Query: 392 VSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVI 449
+ +FN D G + F +F+ G + SE+ LR F +D G G I
Sbjct: 38 RVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI-LRQAFRTFDPEGTGYI 96
Query: 450 SKDDL 454
K L
Sbjct: 97 PKAAL 101
Score = 40.9 bits (97), Expect = 1e-04
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 307 NTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
N D G + F +F+ G + SE+ LR F +D G G I K L
Sbjct: 49 NEADATGNGKIQFPEFLSMMGRRMKQTTSEDI-LRQAFRTFDPEGTGYIPKAAL 101
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin
V, chicken, molecular motor, ATPase, ELC, IQ motif,
muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens}
SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B*
1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 49.5 bits (119), Expect = 2e-07
Identities = 24/148 (16%), Positives = 56/148 (37%), Gaps = 47/148 (31%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSS---------VYELMGTYAYRAFDSGM 381
++++ + F L+D GDG I +++ + V +++G
Sbjct: 5 NKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKS------- 57
Query: 382 VAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR----GSEEEKLRWI 437
D K+ ++FE F+ L + + G+ E+
Sbjct: 58 ------------------------DELKSRRVDFETFLPMLQAVAKNRGQGTYED-YLEG 92
Query: 438 FCLYDINGDGVISKDDLYNIVSSVYELM 465
F ++D G+G + +L ++++++ E M
Sbjct: 93 FRVFDKEGNGKVMGAELRHVLTTLGEKM 120
Score = 41.4 bits (98), Expect = 1e-04
Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 310 DHNKTGFLNFEDFVKGLSILCR----GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
D K+ ++FE F+ L + + G+ E+ F ++D G+G + +L ++++++
Sbjct: 58 DELKSRRVDFETFLPMLQAVAKNRGQGTYED-YLEGFRVFDKEGNGKVMGAELRHVLTTL 116
Query: 366 YELM 369
E M
Sbjct: 117 GEKM 120
Score = 26.8 bits (60), Expect = 9.4
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 365
F D G + + L+ L EE++ + + +G I+ + + SV
Sbjct: 93 FRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHILSV 151
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 49.0 bits (118), Expect = 3e-07
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 29/126 (23%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+EE+ + F L+D +GDG I+ +L ++ S +G
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRS----LG-------------------- 40
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGV 448
Q T+ + N +D + G ++F +F+ + + SEEE L F ++D +G+G+
Sbjct: 41 QNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEE-LIEAFKVFDRDGNGL 99
Query: 449 ISKDDL 454
IS +L
Sbjct: 100 ISAAEL 105
Score = 40.5 bits (96), Expect = 2e-04
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 307 NTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
N +D + G ++F +F+ + + SEEE L F ++D +G+G+IS +L
Sbjct: 53 NEVDADGNGTIDFPEFLSLMARKMKEQDSEEE-LIEAFKVFDRDGNGLISAAEL 105
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 48.6 bits (117), Expect = 3e-07
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 47/135 (34%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSS---------VYELMGTYAYRAFDSGM 381
+EE+ + F L+D + G IS +L ++ S V +LM
Sbjct: 6 TEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLM------------ 53
Query: 382 VAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS--ILCRGSEEEKLRWIFC 439
N +D + + F +F+ +S + C SE+E L F
Sbjct: 54 ---------------------NEIDVDGNHAIEFSEFLALMSRQLKCNDSEQE-LLEAFK 91
Query: 440 LYDINGDGVISKDDL 454
++D NGDG+IS +L
Sbjct: 92 VFDKNGDGLISAAEL 106
Score = 40.5 bits (96), Expect = 2e-04
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 307 NTLDHNKTGFLNFEDFVKGLS--ILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
N +D + + F +F+ +S + C SE+E L F ++D NGDG+IS +L
Sbjct: 54 NEIDVDGNHAIEFSEFLALMSRQLKCNDSEQE-LLEAFKVFDKNGDGLISAAEL 106
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 48.6 bits (117), Expect = 3e-07
Identities = 23/126 (18%), Positives = 39/126 (30%), Gaps = 33/126 (26%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+ + + F + D N DG I K+DL + + +E
Sbjct: 2 DQSQIQEFKEAFNMIDQNRDGFIDKEDL-----------HD-MLASMGKNPTDEYLE--- 46
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGV 448
+ G +NF F+ G + E+ +R F +D G
Sbjct: 47 -------------GMMSEAPGPINFTMFLTMFGEKLNGTDPEDV-IRNAFACFDEEASGF 92
Query: 449 ISKDDL 454
I +D L
Sbjct: 93 IHEDHL 98
Score = 38.2 bits (90), Expect = 0.001
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 309 LDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ G +NF F+ G + E+ +R F +D G I +D L
Sbjct: 48 MMSEAPGPINFTMFLTMFGEKLNGTDPEDV-IRNAFACFDEEASGFIHEDHL 98
Score = 28.2 bits (64), Expect = 3.3
Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 362
F D +GF++ + + L+ + R ++EE + ++ I+ G + + I+
Sbjct: 82 FACFDEEASGFIHEDHLRELLTTMGDRFTDEE-VDEMYREAPIDKKGNFNYVEFTRIL 138
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 48.9 bits (117), Expect = 4e-07
Identities = 24/144 (16%), Positives = 40/144 (27%), Gaps = 38/144 (26%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366
LD + TG + F F + L + F D +G G + +L + +
Sbjct: 47 AMLDRDHTGKMGFNAFKE----LWA--ALNAWKENFMTVDQDGSGTVEHHELRQAIGLMG 100
Query: 367 ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 426
+ +RY+ K G + F+D+V L
Sbjct: 101 YRLS----------------PQTLTTIVKRYS----------KNGRIFFDDYVACCVKL- 133
Query: 427 RGSEEEKLRWIFCLYDINGDGVIS 450
L F D G +
Sbjct: 134 -----RALTDFFRKRDHLQQGSAN 152
Score = 35.4 bits (82), Expect = 0.014
Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 403 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
LD + TG + F F + L + F D +G G + +L +
Sbjct: 47 AMLDRDHTGKMGFNAFKE----LWA--ALNAWKENFMTVDQDGSGTVEHHELRQAIGL 98
Score = 30.4 bits (69), Expect = 0.74
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 34/118 (28%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
F T+D + +G + + + + ++ + L I Y +G I DD
Sbjct: 75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS--KNGRIFFDD------- 125
Query: 365 VYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGF--LNFEDFVK 420
+ + V ++ L F DH + G ++DF++
Sbjct: 126 ------------YVACCV--KLRALTD---------FFRKRDHLQQGSANFIYDDFLQ 160
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding,
ME binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 48.7 bits (117), Expect = 4e-07
Identities = 27/135 (20%), Positives = 52/135 (38%), Gaps = 47/135 (34%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSS---------VYELMGTYAYRAFDSGM 381
+EE+K +R F L+D +G G I +L + + + +++
Sbjct: 23 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMI------------ 70
Query: 382 VAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFC 439
+ +D + +G ++FE+F+ + R S EE + F
Sbjct: 71 ---------------------SEIDKDGSGTIDFEEFLTMMTAKMGERDSREE-ILKAFR 108
Query: 440 LYDINGDGVISKDDL 454
L+D + G I+ DL
Sbjct: 109 LFDDDNSGTITIKDL 123
Score = 40.6 bits (96), Expect = 3e-04
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 307 NTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ +D + +G ++FE+F+ + R S EE + F L+D + G I+ DL
Sbjct: 71 SEIDKDGSGTIDFEEFLTMMTAKMGERDSREE-ILKAFRLFDDDNSGTITIKDL 123
Score = 29.1 bits (66), Expect = 1.9
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363
F D + +G + +D + L EE+L+ + D N D I +D+ I+
Sbjct: 107 FRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 164
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 46.9 bits (111), Expect = 7e-07
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 338 LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRY 397
+ F L+DIN DGV+ + +L + + E + D + + R
Sbjct: 22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERL--------RM 73
Query: 398 AHYVFNTLDHNKTGFLNFEDFVKG 421
+V +D N+ + E+F+
Sbjct: 74 REHVMKNVDTNQDRLVTLEEFLAS 97
Score = 34.9 bits (80), Expect = 0.010
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 434 LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVE 483
+ F L+DIN DGV+ + +L + + E + D + +
Sbjct: 22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERL 71
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 47.4 bits (113), Expect = 1e-06
Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 40/157 (25%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366
+ LD + +G + F +F + L R F +D + G + +L
Sbjct: 49 SMLDRDMSGTMGFNEFKE----LWA--VLNGWRQHFISFDSDRSGTVDPQELQK------ 96
Query: 367 ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 426
A + Q V + +RY+ +G + F+D++ L
Sbjct: 97 ------ALTTMGFRLNPQTVNSIA----KRYS----------TSGKITFDDYIACCVKL- 135
Query: 427 RGSEEEKLRWIFCLYDINGDGVI--SKDDLYNIVSSV 461
L F D G++ S DD V +V
Sbjct: 136 -----RALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 167
Score = 30.8 bits (70), Expect = 0.59
Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 34/118 (28%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
F + D +++G ++ ++ K L+ + + + I Y G I+ DD
Sbjct: 77 HFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYS--TSGKITFDD------- 127
Query: 365 VYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGF--LNFEDFVK 420
+ + V ++ L F D + G +++DF++
Sbjct: 128 ------------YIACCV--KLRALTD---------SFRRRDSAQQGMVNFSYDDFIQ 162
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y
1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y
3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y
2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 46.7 bits (112), Expect = 2e-06
Identities = 18/137 (13%), Positives = 47/137 (34%), Gaps = 33/137 (24%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+++ ++ F + D++ DG +SK+D+ + +
Sbjct: 13 PQKQIQEMKEAFSMIDVDRDGFVSKEDI-----------KA-ISEQLGRAPDDKELT--- 57
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGV 448
+ G LNF F+ + SEE +R F ++D
Sbjct: 58 -------------AMLKEAPGPLNFTMFLSIFSDKLSGTDSEET-IRNAFAMFDEQETKK 103
Query: 449 ISKDDLYNIVSSVYELM 465
++ + + +++ ++ +
Sbjct: 104 LNIEYIKDLLENMGDNF 120
Score = 38.3 bits (90), Expect = 0.002
Identities = 17/120 (14%), Positives = 37/120 (30%), Gaps = 31/120 (25%)
Query: 315 GFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTY 372
G LNF F+ + SEE +R F ++D ++ + + +++ ++ +
Sbjct: 65 GPLNFTMFLSIFSDKLSGTDSEET-IRNAFAMFDEQETKKLNIEYIKDLLENMGDNF--- 120
Query: 373 AYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEE 432
+ F G ++ F ++ EEE
Sbjct: 121 ---------------------NKDEMRMTFKEAPVEG-GKFDYVKFTA---MIKGSGEEE 155
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 47.4 bits (112), Expect = 2e-06
Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 19/125 (15%)
Query: 297 SSYRYAHYVFNTLD---HNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 353
S +A +F++L L ++ L + +LR F + D N DG +
Sbjct: 56 GSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRL 115
Query: 354 SKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFL 413
+ +++ I++ A ++ + + Y + LD G++
Sbjct: 116 TAEEVKEIIALS---------------ASANKLSKI-KERADEYTALIMEELDPTNLGYI 159
Query: 414 NFEDF 418
ED
Sbjct: 160 EMEDL 164
Score = 43.1 bits (101), Expect = 5e-05
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 397 YAHYVFNTLD---HNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+A +F++L L ++ L + +LR F + D N DG ++ ++
Sbjct: 60 FAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEE 119
Query: 454 LYNIVSSV 461
+ I++
Sbjct: 120 VKEIIALS 127
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 46.4 bits (111), Expect = 2e-06
Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 25/121 (20%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
++++ F ++D + DG +S ++L + + S +G +
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRS----LG--------------------KNP 38
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
T + + L+ + F+ I + +++ F D G+G I + +
Sbjct: 39 TNAELNTIKGQLNAKEFDLATFKTVY-RKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAE 97
Query: 454 L 454
L
Sbjct: 98 L 98
Score = 34.8 bits (81), Expect = 0.022
Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 317 LNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ F I + +++ F D G+G I + +L
Sbjct: 55 FDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAEL 98
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 47.5 bits (113), Expect = 2e-06
Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 40/157 (25%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366
+ LD + +G + F +F + ++L R F +D + G + +L ++++
Sbjct: 80 SMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMG 133
Query: 367 ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 426
+ +RY+ G + F+D++ L
Sbjct: 134 FRLS----------------PQAVNSIAKRYS----------TNGKITFDDYIACCVKL- 166
Query: 427 RGSEEEKLRWIFCLYDINGDGVI--SKDDLYNIVSSV 461
L F D GV+ DD V SV
Sbjct: 167 -----RALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV 198
Score = 29.3 bits (66), Expect = 2.3
Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 34/118 (28%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
F + D +++G ++ ++ K L+ + + + I Y +G I+ DD
Sbjct: 108 HFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS--TNGKITFDD------- 158
Query: 365 VYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGF--LNFEDFVK 420
+ + V ++ L F D + G ++DF++
Sbjct: 159 ------------YIACCV--KLRALTD---------SFRRRDTAQQGVVNFPYDDFIQ 193
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 46.1 bits (110), Expect = 3e-06
Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 31/135 (22%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
S + IF L+D G G I+KD L + + + +G +
Sbjct: 1 SATRANKDIFTLFDKKGQGAIAKDSLGDYLRA----IG-------------------YNP 37
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFV-------KGLSILCRGSEEEKLRWIFCLYDING 445
+ Q + L + K L + E+ F ++D
Sbjct: 38 TNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED-FVKAFQVFDKES 96
Query: 446 DGVISKDDLYNIVSS 460
G +S DL +++
Sbjct: 97 TGKVSVGDLRYMLTG 111
Score = 38.7 bits (91), Expect = 0.001
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 8/62 (12%)
Query: 310 DHNKTGFLNFEDFV-------KGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 362
L + K L + E+ F ++D G +S DL ++
Sbjct: 51 SLRDASSLTLDQITGLIEVNEKELDATTKAKTED-FVKAFQVFDKESTGKVSVGDLRYML 109
Query: 363 SS 364
+
Sbjct: 110 TG 111
Score = 27.9 bits (63), Expect = 4.4
Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 4/93 (4%)
Query: 276 TGTIRQDTFKGIYAKFFPCGTSSYRYAHY----VFNTLDHNKTGFLNFEDFVKGLSILCR 331
++ D G+ ++ + F D TG ++ D L+ L
Sbjct: 55 ASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGE 114
Query: 332 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+ ++ + +++ +G I V
Sbjct: 115 KLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 44.3 bits (105), Expect = 4e-06
Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 26/91 (28%)
Query: 332 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQ 391
G E +LR +F D N G + +++ + + + + E +FQ
Sbjct: 23 GEELARLRSVFAACDANRSGRLEREEFRALCTEL--------------RVRPADAEAVFQ 68
Query: 392 VSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
LD ++ G + F++F +G
Sbjct: 69 R------------LDADRDGAITFQEFARGF 87
Score = 37.3 bits (87), Expect = 0.001
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 354
VF D N++G L E+F + L +F D + DG I+
Sbjct: 32 VFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLDADRDGAIT 79
Score = 37.3 bits (87), Expect = 0.001
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
VF D N++G L E+F + L +F D + DG I+
Sbjct: 32 VFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLDADRDGAIT 79
Score = 35.8 bits (83), Expect = 0.004
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 428 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
G E +LR +F D N G + +++ + +
Sbjct: 23 GEELARLRSVFAACDANRSGRLEREEFRALCTE 55
Score = 28.5 bits (64), Expect = 1.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGL 326
VF LD ++ G + F++F +G
Sbjct: 66 VFQRLDADRDGAITFQEFARGF 87
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR
{Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 45.6 bits (109), Expect = 4e-06
Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 39/129 (30%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
+++ + F L+D +G G I K + +++ + G Q
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRA----CG--------------------QN 37
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-------GSEEEKLRWIFCLYDING 445
T ++ ++ E F L +L R G EE F ++D +
Sbjct: 38 PTLAE----ITEIESTLPAEVDMEQF---LQVLNRPNGFDMPGDPEE-FVKGFQVFDKDA 89
Query: 446 DGVISKDDL 454
G+I +L
Sbjct: 90 TGMIGVGEL 98
Score = 39.0 bits (92), Expect = 7e-04
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 11/57 (19%)
Query: 309 LDHNKTGFLNFEDFVKGLSILCR-------GSEEEKLRWIFCLYDINGDGVISKDDL 358
++ ++ E F L +L R G EE F ++D + G+I +L
Sbjct: 46 IESTLPAEVDMEQF---LQVLNRPNGFDMPGDPEE-FVKGFQVFDKDATGMIGVGEL 98
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 45.2 bits (108), Expect = 5e-06
Identities = 20/140 (14%), Positives = 43/140 (30%), Gaps = 53/140 (37%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSS---------VYELMGTYAYRAFDSGM 381
S+ + F L+D GD I+ + +I + + +++G
Sbjct: 3 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNP--------- 53
Query: 382 VAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-------GSEEEKL 434
+ + + FE+F L +L G+ E+
Sbjct: 54 ----------------------SKEEMNAAAITFEEF---LPMLQAAANNKDQGTFED-F 87
Query: 435 RWIFCLYDINGDGVISKDDL 454
++D G+G + +L
Sbjct: 88 VEGLRVFDKEGNGTVMGAEL 107
Score = 37.9 bits (89), Expect = 0.002
Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Query: 310 DHNKTGFLNFEDFVKGLSILCR-------GSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + FE+F L +L G+ E+ ++D G+G + +L
Sbjct: 56 EEMNAAAITFEEF---LPMLQAAANNKDQGTFED-FVEGLRVFDKEGNGTVMGAEL 107
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 45.2 bits (108), Expect = 6e-06
Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 50/139 (35%)
Query: 333 SEEEK--LRWIFCLYD-INGDGVISKDDLYNIVSS---------VYELMGTYAYRAFDSG 380
S + L F ++ G G +S D + I+ + +L+
Sbjct: 8 SSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLI----------- 56
Query: 381 MVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFV-----KGLSILCRGSEEEKLR 435
+ D G ++F+ F + +++LR
Sbjct: 57 ----------------------DEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELR 94
Query: 436 WIFCLYDINGDGVISKDDL 454
F LYD G+G IS D +
Sbjct: 95 EAFRLYDKEGNGYISTDVM 113
Score = 40.2 bits (95), Expect = 3e-04
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 307 NTLDHNKTGFLNFEDFV-----KGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ D G ++F+ F + +++LR F LYD G+G IS D +
Sbjct: 57 DEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVM 113
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 45.2 bits (108), Expect = 7e-06
Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 33/126 (26%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
S+ + L+ F + D + DG I +DL + + L
Sbjct: 11 SQRQMQELKEAFTMIDQDRDGFIGMEDL-----------KD-MFSS------------LG 46
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGV 448
+V + + G LNF F+ G + E+ LR F ++D +G G
Sbjct: 47 RVPPDDELNAMLKECP----GQLNFTAFLTLFGEKVSGTDPEDA-LRNAFSMFDEDGQGF 101
Query: 449 ISKDDL 454
I +D L
Sbjct: 102 IPEDYL 107
Score = 37.1 bits (87), Expect = 0.004
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 315 GFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
G LNF F+ G + E+ LR F ++D +G G I +D L
Sbjct: 63 GQLNFTAFLTLFGEKVSGTDPEDA-LRNAFSMFDEDGQGFIPEDYL 107
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 44.3 bits (105), Expect = 2e-05
Identities = 28/145 (19%), Positives = 57/145 (39%), Gaps = 39/145 (26%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV- 365
+D + TG L FE+F + + +K + I+ +D++ G I +L +
Sbjct: 54 AVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAG 107
Query: 366 YELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 425
+ L E+L+ + +RY+ ++ G ++F++F+ L L
Sbjct: 108 FHLN-----------------EHLYSMIIRRYS---------DEGGNMDFDNFISCLVRL 141
Query: 426 CRGSEEEKLRWIFCLYDINGDGVIS 450
+ + F D +G G I
Sbjct: 142 ------DAMFRAFKSLDKDGTGQIQ 160
Score = 39.7 bits (93), Expect = 6e-04
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 23/128 (17%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
E + R +F D +S +L NI++ V F V
Sbjct: 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMV------- 53
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+D + TG L FE+F + + +K + I+ +D++ G I +
Sbjct: 54 ---------AVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSE 98
Query: 454 LYNIVSSV 461
L +
Sbjct: 99 LPGAFEAA 106
Score = 28.9 bits (65), Expect = 2.6
Identities = 18/117 (15%), Positives = 40/117 (34%), Gaps = 33/117 (28%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
++ D +++G + + E I Y + G + D+
Sbjct: 82 IYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDN------- 133
Query: 365 VYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGF--LNFEDFV 419
F S +V R++ +F+ F +LD + TG +N ++++
Sbjct: 134 ------------FISCLV--RLDAMFR---------AFKSLDKDGTGQIQVNIQEWL 167
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural
genomics, seattle S genomics center for infectious
disease, ssgcid; 1.90A {Entamoeba histolytica} PDB:
3sia_A 3sib_A
Length = 220
Score = 44.4 bits (105), Expect = 2e-05
Identities = 13/127 (10%), Positives = 33/127 (25%), Gaps = 30/127 (23%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
+ ++ F D + G + ++L G
Sbjct: 49 QYTRIYQWFMGVDRDRSGTLEINELMMGQFP----GGIR-----------------LSPQ 87
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
T + D + G ++F +F+ + E +F + G + +
Sbjct: 88 TAL---RMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHE 138
Query: 454 LYNIVSS 460
+ +
Sbjct: 139 ILPALQQ 145
Score = 40.1 bits (94), Expect = 6e-04
Identities = 15/155 (9%), Positives = 44/155 (28%), Gaps = 14/155 (9%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
F +D +++G L + + G + + ++D + +G IS + +
Sbjct: 56 WFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKF 115
Query: 365 VYELMGTYAYRAFD---SGMVAQR------VEYLFQVSTQRYAHYVFNTLDHNKTGFLNF 415
+ + SG + + F ++ + + + L F +
Sbjct: 116 MELAYN--LFVMNARARSGTLEPHEILPALQQLGFYINQR--TSLLLHRLFARGMAFCDL 171
Query: 416 EDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
++ + + + Y
Sbjct: 172 NCWIAICAFAAQTRSAYQ-MIFMNPYYGPMKPFNP 205
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 42.9 bits (102), Expect = 4e-05
Identities = 25/138 (18%), Positives = 55/138 (39%), Gaps = 49/138 (35%)
Query: 333 SEEEK--LRWIFCLYDING-DGVISKDDLYNIVSS---------VYELMGTYAYRAFDSG 380
+EE+K + F ++ + DG IS +L ++ + E++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMI----------- 61
Query: 381 MVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFV----KGLSILCRGSEEEKLRW 436
+ +D + +G ++F++F+ + + +G EE+L
Sbjct: 62 ----------------------DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSD 99
Query: 437 IFCLYDINGDGVISKDDL 454
+F ++D N DG I ++L
Sbjct: 100 LFRMFDKNADGYIDLEEL 117
Score = 39.1 bits (92), Expect = 0.001
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 307 NTLDHNKTGFLNFEDFV----KGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ +D + +G ++F++F+ + + +G EE+L +F ++D N DG I ++L
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEEL 117
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 43.5 bits (103), Expect = 5e-05
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 34/126 (26%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
++ + + F L D + DG ISK+D+ + ++ +G MVA+
Sbjct: 52 TQHQVQEFKEAFQLIDQDKDGFISKNDI----RATFDSLGRLCTEQELDSMVAEA----- 102
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGV 448
G +NF F+ G I E+ + F L+D GDG
Sbjct: 103 -------------------PGPINFTMFLTIFGDRIAGTDEEDV-IVNAFNLFD-EGDGK 141
Query: 449 ISKDDL 454
++ L
Sbjct: 142 CKEETL 147
Score = 36.5 bits (85), Expect = 0.008
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 31/120 (25%)
Query: 315 GFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTY 372
G +NF F+ G I E+ + F L+D GDG ++ L +++ E
Sbjct: 104 GPINFTMFLTIFGDRIAGTDEEDV-IVNAFNLFD-EGDGKCKEETLKRSLTTWGEKF--- 158
Query: 373 AYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEE 432
+Q + + G ++ + F + IL +G++EE
Sbjct: 159 ---------------------SQDEVDQALSEAPIDGNGLIDIKKFAQ---ILTKGAKEE 194
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 40.7 bits (96), Expect = 5e-05
Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 18/87 (20%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
+ +L F D NGDG ++ +L + + + AY+A V + L ++
Sbjct: 5 VKAELEAAFKKLDANGDGYVTALELQTFMVT----LD--AYKALSKDKVKEASAKLIKM- 57
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVK 420
D N G ++ E+F+
Sbjct: 58 -----------ADKNSDGKISKEEFLN 73
Score = 34.9 bits (81), Expect = 0.007
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDL 454
+ +L F D NGDG ++ +L
Sbjct: 5 VKAELEAAFKKLDANGDGYVTALEL 29
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 44.5 bits (104), Expect = 8e-05
Identities = 48/315 (15%), Positives = 89/315 (28%), Gaps = 97/315 (30%)
Query: 105 RDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFIDRE-------FR--VK-------- 147
RD T+ N+ K++ + +S E E+ R+ F
Sbjct: 338 RDGL-ATWDNWKHVNCDKLTTIIESSLNVLEPAEY--RKMFDRLSVFPPSAHIPTILLSL 394
Query: 148 LWNMDELTEQEEY-PEFIDHSELTEENIDSPRYRPQSIEALCRATKFSEAEI-KKI---Y 202
+W ++ + +S L E+ SI + +E + + I Y
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYS-LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY 453
Query: 203 RNFKAECPTGTIRQDTFKGIYAKFFPCGSTYL-FHVGCTIKAECPTGTIRQDTFKGIYAK 261
K I + Y +++ H+ E R F+ ++
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFY--------SHIGHHLKNIEHPE------RMTLFRMVFLD 499
Query: 262 FFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSSY-----RYAHYVFNTLDHNKTGF 316
F +L+ IR D+ A + Y Y+ + +
Sbjct: 500 F-----RFLEQ-----KIRHDS----TAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545
Query: 317 LNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD-DLYNIV-----SSVYELMG 370
DF+ + EE L + SK DL I +++E
Sbjct: 546 NAILDFLPKI--------EENL-------------ICSKYTDLLRIALMAEDEAIFEE-- 582
Query: 371 TYAYRAFDSGMVAQR 385
A++ QR
Sbjct: 583 --AHKQ------VQR 589
Score = 39.5 bits (91), Expect = 0.003
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 39/164 (23%)
Query: 299 YRYAHYVFNT--LDHNKTGFL--NFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 354
+ + H F T + L + FV C+ ++ + ++S
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFD--CKDVQDM-PK-----------SILS 47
Query: 355 KDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLN 414
K+++ +I+ S + GT R F + L + +V L N FL
Sbjct: 48 KEEIDHIIMSKDAVSGT--LRLFWT---------LLSKQEEMVQKFVEEVLRIN-YKFL- 94
Query: 415 FEDFVKGLSILCRGSEEEKLRWIFCLYDINGDG-VISKDDLYNI 457
+ + R +I + D V +K YN+
Sbjct: 95 ----MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK---YNV 131
Score = 32.5 bits (73), Expect = 0.35
Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 30/104 (28%)
Query: 390 FQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 449
F+ +Y Y + + FV C+ ++ + ++
Sbjct: 9 FETGEHQY-QY-------KDILSVFEDAFVDNFD--CKDVQDM-PK-----------SIL 46
Query: 450 SKDDLYNIVSSVYELMGTYAYRAFD------SGMVAQRVEYLFQ 487
SK+++ +I+ S + GT R F MV + VE + +
Sbjct: 47 SKEEIDHIIMSKDAVSGT--LRLFWTLLSKQEEMVQKFVEEVLR 88
Score = 31.7 bits (71), Expect = 0.69
Identities = 55/456 (12%), Positives = 127/456 (27%), Gaps = 151/456 (33%)
Query: 130 SSEQEEYPEFIDREFRVKL-WNMDELTEQEEYPEFIDHSELTEENI---DSPRYRPQSIE 185
S ++E +F++ R+ + M + ++ P + + + + D+ + ++
Sbjct: 73 SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV- 131
Query: 186 ALCRATKFSEAEIKKIYRNFKAECPTGTIRQDTFKGIYAKFFPCGSTYLFHVGCTIKAEC 245
R + + +++ + P + D G G T++ + C
Sbjct: 132 --SRLQPYLK--LRQALLELR---PAKNVLIDGVLG-------SGKTWV-----ALDV-C 171
Query: 246 PTGTIRQDTFKGIY-AKFFPCGST----------YLKAECPTGTIRQDTFKGI------- 287
+ ++ I+ C S + + P T R D I
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID-PNWTSRSDHSSNIKLRIHSI 230
Query: 288 ------------YAK----------------F-FPCG---TSSYRYAHYVFNTLDHNKTG 315
Y F C T+ R+ V + L T
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT--RFKQ-VTDFLSAATTT 287
Query: 316 FLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYR 375
++ + L + +E + Y ++ DL V +
Sbjct: 288 HISLDHHSMTL------TPDEVKS-LLLKY-LD----CRPQDLPREVLTTNPRR------ 329
Query: 376 AFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLN----------FEDFV------ 419
++A+ + + + H + L LN F+
Sbjct: 330 ---LSIIAESIRD-GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385
Query: 420 ----KGLSIL-CRGSEEE------KL-------RW----IFCLYDINGDGVISKDDLY-- 455
LS++ + + KL + + I + + ++ Y
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL 445
Query: 456 --NIVSSVYELMGTYAYRAFDS-GMVAQRVE-YLFQ 487
+IV Y + + FDS ++ ++ Y +
Sbjct: 446 HRSIVDH-YNI-----PKTFDSDDLIPPYLDQYFYS 475
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory
light chain LC-2, mantle muscle; rigor-like, squid,
contractIle protein; 2.60A {Todarodes pacificus} PDB:
2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 42.2 bits (100), Expect = 8e-05
Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 34/130 (26%)
Query: 333 SEEEK--LRWIFCLYDI--NGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEY 388
+++E +R +F L+D DG + + ++ + R +V
Sbjct: 4 TKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDL-------L-----RCLGMNPTEAQVHQ 51
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDFV----KGLSILCRGSEEEKLRWIFCLYDIN 444
E+ + + S + +E F +D
Sbjct: 52 HGGT-------------KKMGEKAYKLEEILPIYEEMSSKDTGTAADE-FMEAFKTFDRE 97
Query: 445 GDGVISKDDL 454
G G+IS ++
Sbjct: 98 GQGLISSAEI 107
Score = 37.6 bits (88), Expect = 0.003
Identities = 9/53 (16%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Query: 310 DHNKTGFLNFEDFV----KGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
E+ + + S + +E F +D G G+IS ++
Sbjct: 56 KKMGEKAYKLEEILPIYEEMSSKDTGTAADE-FMEAFKTFDREGQGLISSAEI 107
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 41.4 bits (98), Expect = 1e-04
Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 33/132 (25%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
EE+ + + G IS D+ R + +
Sbjct: 10 LEEKVDESDVRIYFNEKSSGGKISIDNA-----------SY-NARKLGLAPSSIDEK--- 54
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGV 448
+ L +E +++ + + + + EE L +F +D N G
Sbjct: 55 -------------KIKELYGDNLTYEQYLEYLSICVHDKDNVEE-LIKMFAHFDNNCTGY 100
Query: 449 ISKDDLYNIVSS 460
++K + NI+++
Sbjct: 101 LTKSQMKNILTT 112
Score = 36.0 bits (84), Expect = 0.009
Identities = 12/58 (20%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 309 LDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+ L +E +++ + + + + EE L +F +D N G ++K + NI+++
Sbjct: 56 IKELYGDNLTYEQYLEYLSICVHDKDNVEE-LIKMFAHFDNNCTGYLTKSQMKNILTT 112
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z
1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z
3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z
2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 41.4 bits (98), Expect = 1e-04
Identities = 24/132 (18%), Positives = 39/132 (29%), Gaps = 39/132 (29%)
Query: 333 SEEEK--LRWIFCLYDI--NGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEY 388
S++E L+ +F L+D DG + L ++ R + V
Sbjct: 4 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDV-------C-----RCLGINPRNEDVFA 51
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR------GSEEEKLRWIFCLYD 442
+ L FE+F L G+ + F +D
Sbjct: 52 VGGT-------------HKMGEKSLPFEEF---LPAYEGLMDCEQGTFAD-YMEAFKTFD 94
Query: 443 INGDGVISKDDL 454
G G IS +L
Sbjct: 95 REGQGFISGAEL 106
Score = 38.3 bits (90), Expect = 0.001
Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 10/55 (18%)
Query: 310 DHNKTGFLNFEDFVKGLSILCR------GSEEEKLRWIFCLYDINGDGVISKDDL 358
L FE+F L G+ + F +D G G IS +L
Sbjct: 56 HKMGEKSLPFEEF---LPAYEGLMDCEQGTFAD-YMEAFKTFDREGQGFISGAEL 106
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A;
EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 39.4 bits (92), Expect = 2e-04
Identities = 9/49 (18%), Positives = 20/49 (40%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 354
F D KT ++ E+F + + +E+ ++ +N G +
Sbjct: 30 FENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLK 78
Score = 39.4 bits (92), Expect = 2e-04
Identities = 9/49 (18%), Positives = 20/49 (40%)
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
F D KT ++ E+F + + +E+ ++ +N G +
Sbjct: 30 FENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLK 78
Score = 38.2 bits (89), Expect = 6e-04
Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 24/91 (26%)
Query: 333 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQV 392
S + F +D IS+++ I + +++
Sbjct: 21 SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQIL----------------------- 57
Query: 393 STQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
T ++N + N G L + DF+ S
Sbjct: 58 -TDEQFDRLWNEMPVNAKGRLKYPDFLSRFS 87
Score = 33.2 bits (76), Expect = 0.042
Identities = 6/37 (16%), Positives = 15/37 (40%)
Query: 429 SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 465
S + F +D IS+++ I + +++
Sbjct: 21 SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQIL 57
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 38.9 bits (91), Expect = 3e-04
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Query: 392 VSTQRYAHY--VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 449
VS A Y +F D + GF++ + + G L I+ L D G +
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKT--GLPSTLLAHIWSLCDTKDCGKL 61
Query: 450 SKD 452
SKD
Sbjct: 62 SKD 64
Score = 37.8 bits (88), Expect = 0.001
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 356
+F D + GF++ + + G L I+ L D G +SKD
Sbjct: 15 IFLKTDKDMDGFVSGLEVREIFLKT--GLPSTLLAHIWSLCDTKDCGKLSKD 64
Score = 33.9 bits (78), Expect = 0.019
Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 28/92 (30%)
Query: 333 SEEEKLRW--IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
S EK ++ IF D + DG +S ++ I +G+ + + +++
Sbjct: 5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK--------------TGLPSTLLAHIW 50
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
+ D G L+ + F
Sbjct: 51 SLC------------DTKDCGKLSKDQFALAF 70
Score = 28.9 bits (65), Expect = 1.1
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 429 SEEEKLRW--IFCLYDINGDGVISKDDLYNI 457
S EK ++ IF D + DG +S ++ I
Sbjct: 5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVREI 35
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.3 bits (99), Expect = 3e-04
Identities = 44/337 (13%), Positives = 89/337 (26%), Gaps = 140/337 (41%)
Query: 7 GSQENKNFRIVSADPEPLGQASTNSASADSSNRDAP------FGTFTNFIRSVWQKMSGS 60
SQ + F PEP T +AD D P G F ++ S+ +
Sbjct: 30 ASQLQEQF--NKILPEP-----TEGFAAD----DEPTTPAELVGKFLGYVSSLVEP---- 74
Query: 61 VSNSSEQEEYPE------------FIDQN------------------------KNF---R 81
S+ ++ + +++ N KN+ R
Sbjct: 75 ----SKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITAR 130
Query: 82 IVSADPEPLGQAST--NSASADSSNRDAPFG-----------------TFTNFIRSVWQK 122
I++ P S + ++ A FG T+ + + +
Sbjct: 131 IMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKF 190
Query: 123 MSGSVSN-SSEQEEYPEFIDREFRVKLWNMDELTEQEEYP--EFIDHSELTEENIDS-P- 177
+ ++S + + + + W L P +++ + S P
Sbjct: 191 SAETLSELIRTTLDAEKVFTQGLNILEW----LENPSNTPDKDYLLSIPI------SCPL 240
Query: 178 -------RYRPQSIEALCRATKFSEAEIKKIYRN------------FKAECPTGTIRQDT 218
Y + F+ E++ + AE + ++
Sbjct: 241 IGVIQLAHY-----VVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSW----ES 291
Query: 219 FKGIYAKFFPCGSTYLFHVGCTIKAECPTGTIRQDTF 255
F K T LF +G C + +
Sbjct: 292 FFVSVRKAI----TVLFFIGV----RC------YEAY 314
Score = 42.0 bits (98), Expect = 5e-04
Identities = 55/314 (17%), Positives = 93/314 (29%), Gaps = 110/314 (35%)
Query: 134 EEYPEFIDREFRVKLWN-MDELTEQEEYPEFIDHSELTEENIDSPRYRPQSIEALCRATK 192
+ Y + + +WN D ++ Y I ++ N P ++
Sbjct: 1634 DLYKTS--KAAQ-DVWNRADNHF-KDTYGFSI--LDIVINN-------PVNLTIH----- 1675
Query: 193 FSEAEIKKIYRNFKA----ECPTGTIRQDT-FKGIYAKFFPCGSTYLFHVGCTIKAECPT 247
F + K+I N+ A G ++ + FK I ++Y F
Sbjct: 1676 FGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHS----TSYTF--------RSEK 1723
Query: 248 GTIRQDTF---------KGIYAKFFPCGSTYLKAECPTGTIRQDTFKGIYAKFFPCGTSS 298
G + F K + LK++ G I D F G
Sbjct: 1724 GLLSATQFTQPALTLMEKAAFE--------DLKSK---GLIPAD-------ATF-AG--- 1761
Query: 299 YRYAH----YVFNTLDHNKTGFLNFEDFVKGLSILCRGS-------EEEKLRWIFCLYDI 347
H Y L ++ E V+ + RG +E R + + I
Sbjct: 1762 ----HSLGEY--AALAS-LADVMSIESLVEVVFY--RGMTMQVAVPRDELGRSNYGMIAI 1812
Query: 348 NGDGV---ISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYA------ 398
N V S++ L +V V + +G + + V Y V Q+Y
Sbjct: 1813 NPGRVAASFSQEALQYVVERVGK----------RTGWLVEIVNY--NVENQQYVAAGDLR 1860
Query: 399 --HYVFNTLDHNKT 410
V N L+ K
Sbjct: 1861 ALDTVTNVLNFIKL 1874
Score = 38.9 bits (90), Expect = 0.004
Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 56/213 (26%)
Query: 298 SYRYAHYVFNTLD-H--NKTGFLNFEDFV----KGLSILCRGSEEEKLR--WIFCLYDIN 348
+ + A V+N D H + GF + D V L+I G + +++R + +++
Sbjct: 1638 TSKAAQDVWNRADNHFKDTYGF-SILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETI 1696
Query: 349 GDGVISKDDLY---NIVSSVY-------ELMGT-YAYRAFDSGMVAQRVEY-LFQVSTQR 396
DG + + ++ N S+ Y L T + A + +E F+ +
Sbjct: 1697 VDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPA----LTL--MEKAAFEDLKSK 1750
Query: 397 --------YA-H----YVFNTLDHNKTGFLNFEDFVKGLSILCRGS-------EEEKLRW 436
+A H Y L ++ E V+ + RG +E R
Sbjct: 1751 GLIPADATFAGHSLGEY--AALAS-LADVMSIESLVEVVFY--RGMTMQVAVPRDELGRS 1805
Query: 437 IFCLYDINGDGV---ISKDDLYNIVSSVYELMG 466
+ + IN V S++ L +V V + G
Sbjct: 1806 NYGMIAINPGRVAASFSQEALQYVVERVGKRTG 1838
Score = 29.2 bits (65), Expect = 3.9
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 40/98 (40%)
Query: 386 VEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDING 445
+E++ V T + + L E F K L
Sbjct: 16 LEHVLLVPTASFFIA--SQLQ---------EQFNKILP-------------------EPT 45
Query: 446 DGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVE 483
+G + D+ ++ EL+G + G V+ VE
Sbjct: 46 EGFAADDEP----TTPAELVGKF------LGYVSSLVE 73
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 39.6 bits (93), Expect = 4e-04
Identities = 8/54 (14%), Positives = 14/54 (25%), Gaps = 3/54 (5%)
Query: 307 NTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ED + + E L F L +I+ + L
Sbjct: 10 LETTSTTKMETKYEDMLPVMAEKMDVEEFVSE-LCKGFSLLADPERHLITAESL 62
Score = 39.6 bits (93), Expect = 4e-04
Identities = 8/54 (14%), Positives = 14/54 (25%), Gaps = 3/54 (5%)
Query: 403 NTLDHNKTGFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
+ED + + E L F L +I+ + L
Sbjct: 10 LETTSTTKMETKYEDMLPVMAEKMDVEEFVSE-LCKGFSLLADPERHLITAESL 62
Score = 32.7 bits (75), Expect = 0.095
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE---EEKLRWIFCLYDINGDGVISKDDLYNI 361
F+ L + + E + IL G E +E + + D++GDG +++ + +
Sbjct: 45 GFSLLADPERHLITAESLRRNSGIL--GIEGMSKEDAQGMVREGDLDGDGALNQTEFCVL 102
Score = 32.7 bits (75), Expect = 0.095
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE---EEKLRWIFCLYDINGDGVISKDDLYNI 457
F+ L + + E + IL G E +E + + D++GDG +++ + +
Sbjct: 45 GFSLLADPERHLITAESLRRNSGIL--GIEGMSKEDAQGMVREGDLDGDGALNQTEFCVL 102
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 37.5 bits (88), Expect = 9e-04
Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 30/110 (27%)
Query: 312 NKTGFLNFEDFVKGLSILCRGSEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELM 369
+ +G ++ +D + R SEEE L+ +F + D + G I+ D+L
Sbjct: 1 HSSGHIDDDDKH----MAERLSEEEIGGLKELFKMIDTDNSGTITFDEL----------- 45
Query: 370 GTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFV 419
+ S ++ ++ L + D +K+G +++ +F+
Sbjct: 46 -KDGLKRVGSELMESEIKDLM------------DAADIDKSGTIDYGEFI 82
Score = 36.3 bits (85), Expect = 0.002
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 408 NKTGFLNFEDFVKGLSILCRGSEEEK--LRWIFCLYDINGDGVISKDDL 454
+ +G ++ +D + R SEEE L+ +F + D + G I+ D+L
Sbjct: 1 HSSGHIDDDDKH----MAERLSEEEIGGLKELFKMIDTDNSGTITFDEL 45
Score = 31.3 bits (72), Expect = 0.10
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 353
+F +D + +G + F++ GL + E +++ + DI+ G I
Sbjct: 28 LFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 76
Score = 31.3 bits (72), Expect = 0.10
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVI 449
+F +D + +G + F++ GL + E +++ + DI+ G I
Sbjct: 28 LFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 76
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 37.6 bits (88), Expect = 0.001
Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 24/111 (21%)
Query: 310 DHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM 369
H+ + + + S++ EE++R F + D +G+G IS +L ++++++ E +
Sbjct: 3 SHHHHHHGSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKL 62
Query: 370 GTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
T + D + G +N+E+FV+
Sbjct: 63 ------------------------TDEEVDEMIREADIDGDGQVNYEEFVQ 89
Score = 37.3 bits (87), Expect = 0.001
Identities = 12/55 (21%), Positives = 29/55 (52%)
Query: 406 DHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
H+ + + + S++ EE++R F + D +G+G IS +L +++++
Sbjct: 3 SHHHHHHGSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTN 57
Score = 27.6 bits (62), Expect = 2.5
Identities = 10/60 (16%), Positives = 30/60 (50%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
F D + G+++ + ++ L +E++ + DI+GDG ++ ++ ++++
Sbjct: 34 AFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93
Score = 27.6 bits (62), Expect = 2.5
Identities = 10/60 (16%), Positives = 30/60 (50%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
F D + G+++ + ++ L +E++ + DI+GDG ++ ++ ++++
Sbjct: 34 AFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus
norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 40.5 bits (94), Expect = 0.001
Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 37/144 (25%)
Query: 307 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 366
+D + TG L FE+F + + K + I+ ++ + G I ++L +
Sbjct: 781 AVMDSDTTGKLGFEEFKYLWNNIK------KWQGIYKRFETDRSGTIGSNELPGAFEA-- 832
Query: 367 ELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 426
G + ++ + +RY+ ++TG ++F++F+ L L
Sbjct: 833 --AG---FHLNQH---------IYSMIIRRYS---------DETGNMDFDNFISCLVRL- 868
Query: 427 RGSEEEKLRWIFCLYDINGDGVIS 450
+ + F D NG G I
Sbjct: 869 -----DAMFRAFRSLDKNGTGQIQ 887
Score = 34.8 bits (79), Expect = 0.065
Identities = 17/170 (10%), Positives = 58/170 (34%), Gaps = 14/170 (8%)
Query: 304 YVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 363
V +T + NK G F + + ++ + + + L++ ++
Sbjct: 485 VVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFKTLFSKLA 544
Query: 364 SVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLS 423
+ + + ++++ + + + N +D + G L +F +
Sbjct: 545 GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 604
Query: 424 ILCRGSEEEKLRWIFCLYDINGDGVISKDDL--------YNIVSSVYELM 465
+ IF +D++ G +S ++ + + +++++
Sbjct: 605 RIR------NYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVI 648
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis complex;
NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 37.0 bits (86), Expect = 0.001
Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 390 FQVSTQRYAHY--VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDG 447
++++ ++ +Y F T+ + GF+ + + +L I+ L D + DG
Sbjct: 1 WKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS--KLPILELSHIWELSDFDKDG 58
Query: 448 VISKD 452
++ D
Sbjct: 59 ALTLD 63
Score = 35.5 bits (82), Expect = 0.005
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 356
F T+ + GF+ + + +L I+ L D + DG ++ D
Sbjct: 14 QFKTIQPDLNGFIPGSAAKEFFTKS--KLPILELSHIWELSDFDKDGALTLD 63
Score = 33.5 bits (77), Expect = 0.020
Identities = 11/92 (11%), Positives = 29/92 (31%), Gaps = 28/92 (30%)
Query: 333 SEEEKLRW--IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
++E++ + F + +G I + S + + +++
Sbjct: 4 TDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK--------------SKLPILELSHIW 49
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
++S D +K G L ++F
Sbjct: 50 ELS------------DFDKDGALTLDEFCAAF 69
Score = 27.4 bits (61), Expect = 3.0
Identities = 4/31 (12%), Positives = 11/31 (35%), Gaps = 2/31 (6%)
Query: 429 SEEEKLRW--IFCLYDINGDGVISKDDLYNI 457
++E++ + F + +G I
Sbjct: 4 TDEQRQYYVNQFKTIQPDLNGFIPGSAAKEF 34
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 37.4 bits (87), Expect = 0.001
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 390 FQVSTQRYAHY--VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDG 447
+ V Y +FN+ D +G L L + +L I+ L DI+ DG
Sbjct: 6 WAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQS--SLPQAQLASIWNLSDIDQDG 63
Query: 448 VISKD 452
++ +
Sbjct: 64 KLTAE 68
Score = 36.3 bits (84), Expect = 0.004
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 356
+FN+ D +G L L + +L I+ L DI+ DG ++ +
Sbjct: 19 LFNSHDKTMSGHLTGPQARTILMQS--SLPQAQLASIWNLSDIDQDGKLTAE 68
Score = 34.0 bits (78), Expect = 0.022
Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 28/92 (30%)
Query: 333 SEEEKLRW--IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+ +L++ +F +D G ++ I+ S + ++ ++
Sbjct: 9 PQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--------------SSLPQAQLASIW 54
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGL 422
+S D ++ G L E+F+ +
Sbjct: 55 NLS------------DIDQDGKLTAEEFILAM 74
Score = 29.0 bits (65), Expect = 1.4
Identities = 5/31 (16%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 429 SEEEKLRW--IFCLYDINGDGVISKDDLYNI 457
+ +L++ +F +D G ++ I
Sbjct: 9 PQSSRLKYRQLFNSHDKTMSGHLTGPQARTI 39
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially
structured protein, CAM-like; NMR {Entamoeba
histolytica} PDB: 2lc5_A
Length = 85
Score = 36.9 bits (86), Expect = 0.001
Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 26/90 (28%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLF 390
+ EE+ + F L+D + D ++ ++L + M RA + Q++ +
Sbjct: 9 TAEEQQEYKEAFQLFDKDNDNKLTAEELGTV-------M-----RALGANPTKQKISEI- 55
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDFVK 420
D + +G + E F+
Sbjct: 56 -----------VKDYDKDNSGKFDQETFLT 74
Score = 34.2 bits (79), Expect = 0.012
Identities = 7/28 (25%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 429 SEEEK--LRWIFCLYDINGDGVISKDDL 454
+ EE+ + F L+D + D ++ ++L
Sbjct: 9 TAEEQQEYKEAFQLFDKDNDNKLTAEEL 36
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 36.7 bits (85), Expect = 0.002
Identities = 10/65 (15%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 390 FQVSTQRYAHY--VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDG 447
++++ ++ +Y F +L + + F++ + +L +I+ L D + DG
Sbjct: 14 WRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKS--KLSIPELSYIWELSDADCDG 71
Query: 448 VISKD 452
++
Sbjct: 72 ALTLP 76
Score = 34.7 bits (80), Expect = 0.012
Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 356
F +L + + F++ + +L +I+ L D + DG ++
Sbjct: 27 QFRSLQPDPSSFISGSVAKNFFTKS--KLSIPELSYIWELSDADCDGALTLP 76
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 36.8 bits (86), Expect = 0.003
Identities = 9/44 (20%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 315 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
G +++ F L L ++ + ++ +F + D + G I +++L
Sbjct: 22 GTFDYKRFFH-LVGLKGKTDAQ-VKEVFEILDKDQSGFIEEEEL 63
Score = 36.8 bits (86), Expect = 0.003
Identities = 9/44 (20%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 411 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
G +++ F L L ++ + ++ +F + D + G I +++L
Sbjct: 22 GTFDYKRFFH-LVGLKGKTDAQ-VKEVFEILDKDQSGFIEEEEL 63
Score = 28.7 bits (65), Expect = 1.3
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 305 VFNTLDHNKTGFLNFED---FVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 361
VF LD +++GF+ E+ +KG S R + + + + D + DG I D+ +
Sbjct: 46 VFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKM 105
Query: 362 VSS 364
V+
Sbjct: 106 VAQ 108
Score = 28.7 bits (65), Expect = 1.3
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 401 VFNTLDHNKTGFLNFED---FVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
VF LD +++GF+ E+ +KG S R + + + + D + DG I D+ +
Sbjct: 46 VFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKM 105
Query: 458 VSS 460
V+
Sbjct: 106 VAQ 108
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 35.7 bits (83), Expect = 0.005
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 315 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
N++ F + + ++ F + D + G I +D+L
Sbjct: 23 DSFNYKAFFA--KVGLTAKSADDIKKAFFVIDQDKSGFIEEDEL 64
Score = 35.7 bits (83), Expect = 0.005
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 411 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
N++ F + + ++ F + D + G I +D+L
Sbjct: 23 DSFNYKAFFA--KVGLTAKSADDIKKAFFVIDQDKSGFIEEDEL 64
Score = 28.8 bits (65), Expect = 1.3
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 305 VFNTLDHNKTGFLNFE---DFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 354
F +D +K+GF+ + F++ S R + + + D +GDG I
Sbjct: 47 AFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIG 99
Score = 28.8 bits (65), Expect = 1.3
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 401 VFNTLDHNKTGFLNFE---DFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
F +D +K+GF+ + F++ S R + + + D +GDG I
Sbjct: 47 AFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIG 99
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 35.7 bits (83), Expect = 0.006
Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 312 NKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
N++ F ++ ++++ +F + D + G I +++L
Sbjct: 20 QAADSFNYKSFFS--TVGLSSKTPDQIKKVFGILDQDKSGFIEEEEL 64
Score = 35.7 bits (83), Expect = 0.006
Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 408 NKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
N++ F ++ ++++ +F + D + G I +++L
Sbjct: 20 QAADSFNYKSFFS--TVGLSSKTPDQIKKVFGILDQDKSGFIEEEEL 64
Score = 30.3 bits (69), Expect = 0.48
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 305 VFNTLDHNKTGFLNFE---DFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 354
VF LD +K+GF+ E F+K S R + + D +GDG I
Sbjct: 47 VFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIG 99
Score = 30.3 bits (69), Expect = 0.48
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 401 VFNTLDHNKTGFLNFE---DFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
VF LD +K+GF+ E F+K S R + + D +GDG I
Sbjct: 47 VFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIG 99
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 35.3 bits (82), Expect = 0.006
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Query: 315 GFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ F + GLS +++ IF D + G + D+L
Sbjct: 22 DTFEPQKFFQTSGLS----KMSASQVKDIFRFIDNDQSGYLDGDEL 63
Score = 35.3 bits (82), Expect = 0.006
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Query: 411 GFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
+ F + GLS +++ IF D + G + D+L
Sbjct: 22 DTFEPQKFFQTSGLS----KMSASQVKDIFRFIDNDQSGYLDGDEL 63
Score = 33.0 bits (76), Expect = 0.052
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 282 DTFKGIYAKFFP-CGTSSYRYAHY--VFNTLDHNKTGFLNFEDFVKGLSILCRGSE---E 335
DTF+ KFF G S + +F +D++++G+L+ ++ L + E
Sbjct: 22 DTFE--PQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTE 79
Query: 336 EKLRWIFCLYDINGDGVIS 354
+ + + D +GDG I
Sbjct: 80 SETKSLMDAADNDGDGKIG 98
Score = 32.6 bits (75), Expect = 0.058
Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE---EEKLRWIFCLYDINGDGVIS 450
+F +D++++G+L+ ++ L + E + + + D +GDG I
Sbjct: 46 IFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIG 98
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A
1rk9_A 1g33_A
Length = 109
Score = 35.3 bits (82), Expect = 0.008
Identities = 7/44 (15%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 315 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + F + + + + + ++ +F + D + G I +D+L
Sbjct: 22 DSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDEL 63
Score = 35.3 bits (82), Expect = 0.008
Identities = 7/44 (15%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 411 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
+ + F + + + + + ++ +F + D + G I +D+L
Sbjct: 22 DSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDEL 63
Score = 33.8 bits (78), Expect = 0.025
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE---EEKLRWIFCLYDINGDGVISKDDLYNI 361
VF+ LD +K+GF+ ++ L + ++ + + D +GDG I ++ +
Sbjct: 46 VFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 105
Query: 362 VSS 364
V+
Sbjct: 106 VAE 108
Score = 33.8 bits (78), Expect = 0.025
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSE---EEKLRWIFCLYDINGDGVISKDDLYNI 457
VF+ LD +K+GF+ ++ L + ++ + + D +GDG I ++ +
Sbjct: 46 VFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 105
Query: 458 VSS 460
V+
Sbjct: 106 VAE 108
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 35.2 bits (82), Expect = 0.008
Identities = 8/44 (18%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 315 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
G N + F + + + ++ +F D + G I +++L
Sbjct: 23 GSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEEL 64
Score = 35.2 bits (82), Expect = 0.008
Identities = 8/44 (18%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 411 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
G N + F + + + ++ +F D + G I +++L
Sbjct: 23 GSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEEL 64
Score = 28.3 bits (64), Expect = 2.0
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 305 VFNTLDHNKTGFLNFED---FVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 356
VF +D + +GF+ E+ +K + R + + + D +GDG I D
Sbjct: 47 VFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGID 101
Score = 28.3 bits (64), Expect = 2.0
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 401 VFNTLDHNKTGFLNFED---FVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 452
VF +D + +GF+ E+ +K + R + + + D +GDG I D
Sbjct: 47 VFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGID 101
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 34.8 bits (80), Expect = 0.011
Identities = 11/71 (15%), Positives = 27/71 (38%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 328
+ + E ++ + FK + + P +LD N+ L F ++ + +
Sbjct: 31 FARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 90
Query: 329 LCRGSEEEKLR 339
L + ++K
Sbjct: 91 LAKEIRKKKDL 101
Score = 28.2 bits (63), Expect = 2.1
Identities = 7/35 (20%), Positives = 16/35 (45%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLR 435
+LD N+ L F ++ + + L + ++K
Sbjct: 67 KMKSLDVNQDSELKFNEYWRLIGELAKEIRKKKDL 101
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 34.1 bits (79), Expect = 0.012
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDL 358
SEE + F ++D +G G IS +L
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKEL 42
Score = 34.1 bits (79), Expect = 0.012
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 429 SEEEK--LRWIFCLYDINGDGVISKDDL 454
SEE + F ++D +G G IS +L
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKEL 42
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell
membrane, hydrolase, MEMB protease, thiol protease,
phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A
1df0_A 1u5i_A 1kfu_L 1kfx_L
Length = 714
Score = 37.1 bits (85), Expect = 0.013
Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 37/146 (25%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+ + LD + +G L ++F + + +K + I+ D++ G ++ ++ +
Sbjct: 580 MVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKAL-- 631
Query: 365 VYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSI 424
E G ++ L QV R+A + ++F++FV+ L
Sbjct: 632 --EEAG---FKLPCQ---------LHQVIVARFA---------DDELIIDFDNFVRCLVR 668
Query: 425 LCRGSEEEKLRWIFCLYDINGDGVIS 450
L E L IF D G I
Sbjct: 669 L------EILFKIFKQLDPENTGTIQ 688
Score = 30.9 bits (69), Expect = 1.1
Identities = 18/163 (11%), Positives = 48/163 (29%), Gaps = 30/163 (18%)
Query: 311 HNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 370
++ E I + D IS +L I+ V
Sbjct: 506 KADYQTVDDEIEANIEEIEANEEDIGDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRE 565
Query: 371 TYAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE 430
F + + + LD + +G L ++F + +
Sbjct: 566 DIKSDGF----------------SIETCKIMVDMLDEDGSGKLGLKEFYILWTKI----- 604
Query: 431 EEKLRWIFCLYDINGDGVISKDDL--------YNIVSSVYELM 465
+K + I+ D++ G ++ ++ + + +++++
Sbjct: 605 -QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVI 646
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 33.6 bits (78), Expect = 0.014
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDL 358
SEE+K ++ F L+D N G I +L
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHEL 29
Score = 33.6 bits (78), Expect = 0.014
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 429 SEEEK--LRWIFCLYDINGDGVISKDDL 454
SEE+K ++ F L+D N G I +L
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHEL 29
Score = 26.7 bits (60), Expect = 4.2
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSE--EEKLRWIFCLYDINGDGVISKDDLYNIVS 363
F+ D NKTG +++ + + L G + + ++ + YD G+G I DD +I++
Sbjct: 13 FDLFDTNKTGSIDYHELKVAMRAL--GFDVKKPEILELMNEYDREGNGYIGFDDFLDIMT 70
Score = 26.7 bits (60), Expect = 4.2
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSE--EEKLRWIFCLYDINGDGVISKDDLYNIVS 459
F+ D NKTG +++ + + L G + + ++ + YD G+G I DD +I++
Sbjct: 13 FDLFDTNKTGSIDYHELKVAMRAL--GFDVKKPEILELMNEYDREGNGYIGFDDFLDIMT 70
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: a.39.1.5
Length = 67
Score = 33.2 bits (77), Expect = 0.016
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 24/83 (28%)
Query: 338 LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRY 397
+ +F +D N DG +S D+ + AF + + F+
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVA------------LAFSPYFTQEDIVKFFEE----- 45
Query: 398 AHYVFNTLDHNKTGFLNFEDFVK 420
+D + G LN ++F
Sbjct: 46 -------IDVDGNGELNADEFTS 61
Score = 31.7 bits (73), Expect = 0.066
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
VF D NK G L+ ++F + +E + F D++G+G ++ D+ + +
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65
Score = 31.7 bits (73), Expect = 0.066
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
VF D NK G L+ ++F + +E + F D++G+G ++ D+ + +
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65
Score = 31.3 bits (72), Expect = 0.078
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 434 LRWIFCLYDINGDGVISKDDL 454
+ +F +D N DG +S D+
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEF 23
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping,
EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB:
1h4b_A
Length = 86
Score = 33.8 bits (78), Expect = 0.016
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDL 358
+ ++ IF +D NGDG IS +L
Sbjct: 6 TPQDIADRERIFKRFDTNGDGKISSSEL 33
Score = 33.8 bits (78), Expect = 0.016
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 429 SEEEK--LRWIFCLYDINGDGVISKDDL 454
+ ++ IF +D NGDG IS +L
Sbjct: 6 TPQDIADRERIFKRFDTNGDGKISSSEL 33
Score = 28.0 bits (63), Expect = 1.6
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 354
+F D N G ++ + L L + +E +R + D +GDG IS
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTLGSVTPDE-VRRMMAEIDTDGDGFIS 64
Score = 28.0 bits (63), Expect = 1.6
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
+F D N G ++ + L L + +E +R + D +GDG IS
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTLGSVTPDE-VRRMMAEIDTDGDGFIS 64
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 33.8 bits (78), Expect = 0.022
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 315 GFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
+ + F + G+S +L+ IF + D + G I +D+L
Sbjct: 22 DSFSPKKFFQISGMS----KKSSSQLKEIFRILDNDQSGFIEEDEL 63
Score = 33.8 bits (78), Expect = 0.022
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 411 GFLNFEDFVK--GLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
+ + F + G+S +L+ IF + D + G I +D+L
Sbjct: 22 DSFSPKKFFQISGMS----KKSSSQLKEIFRILDNDQSGFIEEDEL 63
Score = 32.2 bits (74), Expect = 0.090
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 282 DTFKGIYAKFFP-CGTSSYRYAHY--VFNTLDHNKTGFLNFED---FVKGLSILCRGSEE 335
D+F KFF G S + +F LD++++GF+ ++ F++ R
Sbjct: 22 DSFS--PKKFFQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTA 79
Query: 336 EKLRWIFCLYDINGDGVISKDDLYNIVSS 364
+ + D +GDG I ++ +V S
Sbjct: 80 SETKTFLAAADHDGDGKIGAEEFQEMVQS 108
Score = 32.2 bits (74), Expect = 0.094
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 401 VFNTLDHNKTGFLNFED---FVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNI 457
+F LD++++GF+ ++ F++ R + + D +GDG I ++ +
Sbjct: 46 IFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEM 105
Query: 458 VSS 460
V S
Sbjct: 106 VQS 108
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 32.9 bits (76), Expect = 0.026
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 335 EEKLRWIFCLYDINGDGVISKDDL 358
+ + IF +D NGDG IS +L
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSEL 25
Score = 32.9 bits (76), Expect = 0.026
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 431 EEKLRWIFCLYDINGDGVISKDDL 454
+ + IF +D NGDG IS +L
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSEL 25
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 33.3 bits (77), Expect = 0.040
Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 315 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
++F + + ++ F + D + G I +D+L
Sbjct: 22 DSFKHKEFFA--KVGLASKSLDDVKKAFYVIDQDKSGFIEEDEL 63
Score = 33.3 bits (77), Expect = 0.040
Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 411 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
++F + + ++ F + D + G I +D+L
Sbjct: 22 DSFKHKEFFA--KVGLASKSLDDVKKAFYVIDQDKSGFIEEDEL 63
Score = 27.9 bits (63), Expect = 2.5
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 305 VFNTLDHNKTGFLNFED---FVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 354
F +D +K+GF+ ++ F++ S R + + + D +GDG+I
Sbjct: 46 AFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIG 98
Score = 27.9 bits (63), Expect = 2.5
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 401 VFNTLDHNKTGFLNFED---FVKGLSILCRGSEEEKLRWIFCLYDINGDGVIS 450
F +D +K+GF+ ++ F++ S R + + + D +GDG+I
Sbjct: 46 AFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIG 98
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases,
like, EF-hand, structural genomics, structural genomics
CON SGC, hydrolase; 1.80A {Homo sapiens}
Length = 174
Score = 33.8 bits (77), Expect = 0.057
Identities = 28/179 (15%), Positives = 55/179 (30%), Gaps = 35/179 (19%)
Query: 281 QDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRW 340
Q P S + ++ G L+ E+F + +
Sbjct: 27 QGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWK------RLVHYQH 80
Query: 341 IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQRYAHY 400
+F + GV+ DL+ + + L G L + T RY+
Sbjct: 81 VFQKVQTSP-GVLLSSDLWKAIENTDFLRGI------------FISRELLHLVTLRYS-- 125
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGV-ISKDDLYNIV 458
+ G ++F V L L E + F +G G+ +++ + ++V
Sbjct: 126 -------DSVGRVSFPSLVCFLMRL------EAMAKTFRNLSKDGKGLYLTEMEWMSLV 171
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1;
phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 34.9 bits (79), Expect = 0.062
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 32/126 (25%)
Query: 333 SEEEKL-RWI---FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEY 388
+ +KL WI D N D ++ +L + + +
Sbjct: 4 DQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELN---------------------- 41
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGV 448
QV YA +F DH++T L E+ +L + +E + F + +
Sbjct: 42 -IQVDDG-YARKIFRECDHSQTDSLEDEEIETFYKMLTQRAE---IDRAFEEAAGSAE-T 95
Query: 449 ISKDDL 454
+S + L
Sbjct: 96 LSVERL 101
Score = 31.8 bits (71), Expect = 0.64
Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 357
YA +F DH++T L E+ +L + +E + F + + +S +
Sbjct: 45 DDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQRAE---IDRAFEEAAGSAE-TLSVER 100
Query: 358 L 358
L
Sbjct: 101 L 101
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 31.8 bits (73), Expect = 0.073
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDL 358
+EE++ F ++D NGDGVI D+
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEF 30
Score = 31.8 bits (73), Expect = 0.073
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDL 454
+EE++ F ++D NGDGVI D+
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEF 30
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 34.5 bits (78), Expect = 0.080
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 364
FN D KTG ++ EDF L + E + I + D N GV++ + +S
Sbjct: 730 SFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSR 789
Query: 365 VYE 367
Sbjct: 790 ETA 792
Score = 34.5 bits (78), Expect = 0.080
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 401 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 460
FN D KTG ++ EDF L + E + I + D N GV++ + +S
Sbjct: 730 SFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSR 789
Query: 461 VYE 463
Sbjct: 790 ETA 792
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 31.2 bits (71), Expect = 0.11
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFV 323
Y E + ++ K + FP R +F LD N G ++FE+F
Sbjct: 16 YAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQ 70
Score = 26.5 bits (59), Expect = 5.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 401 VFNTLDHNKTGFLNFEDFV 419
+F LD N G ++FE+F
Sbjct: 52 LFQELDKNGDGEVSFEEFQ 70
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 30.5 bits (70), Expect = 0.14
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKDDL 358
R E+ L+ F +D +GDG I+ D+L
Sbjct: 2 RAGLED-LQVAFRAFDQDGDGHITVDEL 28
Score = 30.5 bits (70), Expect = 0.14
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 427 RGSEEEKLRWIFCLYDINGDGVISKDDL 454
R E+ L+ F +D +GDG I+ D+L
Sbjct: 2 RAGLED-LQVAFRAFDQDGDGHITVDEL 28
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 31.3 bits (71), Expect = 0.14
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDF---VKG 325
Y E T+ + K + K G + +LD N ++F+++ +
Sbjct: 19 YSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78
Query: 326 LSILC 330
L +
Sbjct: 79 LCMAY 83
Score = 26.6 bits (59), Expect = 5.3
Identities = 5/29 (17%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 401 VFNTLDHNKTGFLNFEDF---VKGLSILC 426
+ +LD N ++F+++ + L +
Sbjct: 55 LMKSLDKNSDQEIDFKEYSVFLTMLCMAY 83
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 31.6 bits (72), Expect = 0.16
Identities = 6/28 (21%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 333 SEEEK--LRWIFCLYDINGDGVISKDDL 358
+ + + +D+NG+G I L
Sbjct: 27 LPSKLEGFKEKYMEFDLNGNGDIDIMSL 54
Score = 31.6 bits (72), Expect = 0.16
Identities = 6/28 (21%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 429 SEEEK--LRWIFCLYDINGDGVISKDDL 454
+ + + +D+NG+G I L
Sbjct: 27 LPSKLEGFKEKYMEFDLNGNGDIDIMSL 54
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1mr8_A
Length = 93
Score = 31.3 bits (71), Expect = 0.16
Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDF---VKG 325
Y + + +D K + P + A F LD N G +NF++F V
Sbjct: 19 YSLIKGNFHAVYRDDLKKLLETESP-QYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77
Query: 326 LSILC 330
+ +
Sbjct: 78 MGVAA 82
Score = 29.0 bits (65), Expect = 1.0
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 395 QRYAHYVFNTLDHNKTGFLNFEDF---VKGLSILC 426
++ A F LD N G +NF++F V + +
Sbjct: 48 KKGADVWFKELDINTDGAVNFQEFLILVIKMGVAA 82
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 30.6 bits (70), Expect = 0.21
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDL 358
EE+L+ F ++D + +G IS +L
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASEL 31
Score = 30.6 bits (70), Expect = 0.21
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDL 454
EE+L+ F ++D + +G IS +L
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASEL 31
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 31.4 bits (71), Expect = 0.29
Identities = 13/118 (11%), Positives = 36/118 (30%), Gaps = 29/118 (24%)
Query: 334 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 393
+ + + +D+N +G I L ++ +G
Sbjct: 48 KLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK----LG--------------------VPK 83
Query: 394 TQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISK 451
T + + + + +++ DFV + G L+ + +++ + K
Sbjct: 84 THLEMKKMISEVTGGVSDTISYRDFVN----MMLGKRSAVLK-LVMMFEGKANESSPK 136
Score = 31.0 bits (70), Expect = 0.41
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 430 EEEKLRWIFCLYDINGDGVISKDDL 454
+ + + +D+N +G I L
Sbjct: 48 KLTAFKEKYMEFDLNNEGEIDLMSL 72
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural
genomics, PSI, protein structure initiative; NMR {Homo
sapiens} SCOP: a.39.1.7
Length = 118
Score = 30.8 bits (69), Expect = 0.29
Identities = 11/79 (13%), Positives = 22/79 (27%), Gaps = 8/79 (10%)
Query: 270 LKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNK--------TGFLNFED 321
+ I + F+ + + +F + + + D
Sbjct: 39 MAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLND 98
Query: 322 FVKGLSILCRGSEEEKLRW 340
S+L G E+KL W
Sbjct: 99 VSCYFSLLEGGRPEDKLEW 117
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1irj_A*
Length = 113
Score = 30.6 bits (69), Expect = 0.34
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 269 YLKAECPTGTIRQDTFKGIYAK----FFPCGTSSYRYAHYVFNTLDHNKTGFLNFEDF-- 322
Y T+ Q FK + K F + + ++ LD N L+FE+F
Sbjct: 21 YSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIM 80
Query: 323 -VKGLSILC 330
+ L+
Sbjct: 81 LMARLTWAS 89
Score = 27.6 bits (61), Expect = 4.7
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 391 QVSTQRYAHYVFNTLDHNKTGFLNFEDF---VKGLSILC 426
+ ++ ++ LD N L+FE+F + L+
Sbjct: 51 ENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLTWAS 89
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 30.2 bits (68), Expect = 0.36
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 389 LFQVSTQR--YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGD 446
L Q+S+ Y Y + ++ TG + D L G + L I+ L D +G
Sbjct: 3 LTQLSSGNPVYEKY-YRQVEAGNTGRVLALDAAAFLK--KSGLPDLILGKIWDLADTDGK 59
Query: 447 GVISKDDLY 455
GV+SK + +
Sbjct: 60 GVLSKQEFF 68
Score = 30.2 bits (68), Expect = 0.38
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLY 359
+ ++ TG + D L G + L I+ L D +G GV+SK + +
Sbjct: 16 YYRQVEAGNTGRVLALDAAAFLK--KSGLPDLILGKIWDLADTDGKGVLSKQEFF 68
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 30.3 bits (68), Expect = 0.79
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 309 LDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 358
L+ FL+ + + S+ E + + +D+NG+G I L
Sbjct: 24 LEGINKQFLDDPKYSNDEDL---PSKLEAFKVKYMEFDLNGNGDIDIMSL 70
Score = 30.3 bits (68), Expect = 0.79
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 405 LDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 454
L+ FL+ + + S+ E + + +D+NG+G I L
Sbjct: 24 LEGINKQFLDDPKYSNDEDL---PSKLEAFKVKYMEFDLNGNGDIDIMSL 70
Score = 28.0 bits (62), Expect = 4.5
Identities = 8/52 (15%), Positives = 16/52 (30%)
Query: 306 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 357
+ D N G ++ + L L +L+ + + S D
Sbjct: 54 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSD 105
Score = 28.0 bits (62), Expect = 4.5
Identities = 8/52 (15%), Positives = 16/52 (30%)
Query: 402 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
+ D N G ++ + L L +L+ + + S D
Sbjct: 54 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSD 105
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type
four-helix bundle, metal binding protein; NMR {Rattus
norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A
2l0p_A 2jpt_A
Length = 93
Score = 29.0 bits (65), Expect = 1.0
Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDF--- 322
+ E + + K + + A V LD N G ++F++F
Sbjct: 18 HSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVL 77
Query: 323 VKGLSILC 330
V L++ C
Sbjct: 78 VAALTVAC 85
Score = 28.6 bits (64), Expect = 1.4
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDF---VKGLSILC 426
+L + LD N G ++F++F V L++ C
Sbjct: 43 SFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTVAC 85
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM
barrel domain, hydrolase, calcium binding, phospholipid
binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Length = 816
Score = 30.7 bits (68), Expect = 1.2
Identities = 16/120 (13%), Positives = 32/120 (26%), Gaps = 10/120 (8%)
Query: 298 SYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 357
+ + D +F+ F K L SE + IF N G I+
Sbjct: 194 ALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLERSE---IEGIFKELSKNK-GNITTVM 249
Query: 358 LYNIVSSVYELMGT--YAYRAFDSGMVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNF 415
+ ++ + + + + ++ T + G L F
Sbjct: 250 FRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKE----GLLYF 305
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH
domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A
1f8h_A 1ff1_A
Length = 106
Score = 29.0 bits (65), Expect = 1.3
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 390 FQVSTQRYAHY--VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDG 447
+ V + A Y +F++L GFL+ + L + L ++ L DI+ DG
Sbjct: 7 WAVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLL--NSKLPVDILGRVWELSDIDHDG 63
Query: 448 VISKD 452
++ +D
Sbjct: 64 MLDRD 68
Score = 27.1 bits (60), Expect = 5.2
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 305 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKD 356
+F++L GFL+ + L + L ++ L DI+ DG++ +D
Sbjct: 20 IFDSLS-PVNGFLSGDKVKPVLL--NSKLPVDILGRVWELSDIDHDGMLDRD 68
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 28.6 bits (64), Expect = 1.3
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDF--- 322
Y +E + + K + S + V N LD NK ++F +F
Sbjct: 19 YSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVL 78
Query: 323 VKGLSILC 330
V L++ C
Sbjct: 79 VAALTVAC 86
Score = 28.3 bits (63), Expect = 2.0
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 381 MVAQRVEYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDF---VKGLSILC 426
+ A+ ++L + N LD NK ++F +F V L++ C
Sbjct: 38 LNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAALTVAC 86
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding
protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Length = 113
Score = 29.1 bits (65), Expect = 1.3
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDFVK- 324
Y E + + K + + P + LD N+ ++F+++
Sbjct: 31 YSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF 90
Query: 325 --GLSILC 330
++++C
Sbjct: 91 LSCIAMMC 98
Score = 28.0 bits (62), Expect = 2.9
Identities = 6/43 (13%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK---GLSILC 426
+L + + + + + LD N+ ++F+++ ++++C
Sbjct: 56 SFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAMMC 98
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding
protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A
1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X*
3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A*
3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 28.6 bits (64), Expect = 1.3
Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 6/68 (8%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDF--- 322
Y E +++ K + + V TLD N G +F++F
Sbjct: 18 YSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAF 77
Query: 323 VKGLSILC 330
V ++ C
Sbjct: 78 VAMITTAC 85
Score = 27.8 bits (62), Expect = 2.7
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDF---VKGLSILC 426
+L ++ Q V TLD N G +F++F V ++ C
Sbjct: 43 HFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMITTAC 85
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin),
ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2
PDB: 1nsh_A
Length = 99
Score = 28.7 bits (64), Expect = 1.5
Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDF--- 322
+ + I + F T + + + LD + G L+F++F
Sbjct: 22 HAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNL 81
Query: 323 VKGLSILC 330
+ GL+I C
Sbjct: 82 IGGLAIAC 89
Score = 27.5 bits (61), Expect = 3.9
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDF---VKGLSILC 426
+ + LD + G L+F++F + GL+I C
Sbjct: 47 AFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGLAIAC 89
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 28.6 bits (64), Expect = 1.5
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 23/94 (24%)
Query: 336 EKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTQ 395
E + + F + + G ++K+DL + M + +L
Sbjct: 9 ETMMFTFHKFAGD-KGYLTKEDLRVL-------------------MEKEFPGFLENQKDP 48
Query: 396 RYAHYVFNTLDHNKTGFLNFEDFVK---GLSILC 426
+ LD + G + F+ F GL+I C
Sbjct: 49 LAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIAC 82
Score = 28.6 bits (64), Expect = 1.6
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 277 GTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDFVK---GLSILC 330
G + ++ + + K FP + + V LD + G + F+ F GL+I C
Sbjct: 23 GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIAC 82
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins, protein
dynamics, binding protein; 2.10A {Homo sapiens} PDB:
2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 28.2 bits (63), Expect = 1.7
Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK---GLSILCRGSEEEKLR 435
L ++ A + LD N G ++F+++ G++ E+ +
Sbjct: 46 HMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPIAKLIHEQEQ 97
Score = 26.7 bits (59), Expect = 7.2
Identities = 7/38 (18%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 305 VFNTLDHNKTGFLNFEDFVK---GLSILCRGSEEEKLR 339
+ LD N G ++F+++ G++ E+ +
Sbjct: 60 LIQNLDANHDGRISFDEYWTLIGGITGPIAKLIHEQEQ 97
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 28.2 bits (63), Expect = 1.8
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDFVK- 324
Y E + + K + + P + LD N+ ++F+++
Sbjct: 19 YSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF 78
Query: 325 --GLSILC 330
++++C
Sbjct: 79 LSCIAMMC 86
Score = 27.9 bits (62), Expect = 2.2
Identities = 6/43 (13%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK---GLSILC 426
+L + + + + + LD N+ ++F+++ ++++C
Sbjct: 44 SFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAMMC 86
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 28.3 bits (63), Expect = 1.9
Identities = 8/68 (11%), Positives = 23/68 (33%), Gaps = 6/68 (8%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDFVK- 324
Y E + + K + + P + LD N+ ++F+++
Sbjct: 22 YSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF 81
Query: 325 --GLSILC 330
++++
Sbjct: 82 LSSIAMMS 89
Score = 27.5 bits (61), Expect = 3.2
Identities = 5/43 (11%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK---GLSILC 426
+L + + + + + LD N+ ++F+++ ++++
Sbjct: 47 SWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIAMMS 89
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural
genomics/proteomics initiativ structural genomics,
ligase-RNA complex; 3.21A {Pyrococcus horikoshii}
Length = 967
Score = 29.9 bits (67), Expect = 2.2
Identities = 23/118 (19%), Positives = 33/118 (27%), Gaps = 10/118 (8%)
Query: 42 PFGTFTNFIR-SVWQKMSGSVSNSSEQEEYPEFIDQNKNFRIVSADPEPLGQASTNSASA 100
P G N QKMS S N ++ AD L S +
Sbjct: 635 PKGIAVNGFGTLEGQKMSKSKGN---------VLNFIDAIEENGADVVRLYIMSLAEHDS 685
Query: 101 DSSNRDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFIDREFRVKLWNMDELTEQE 158
D R G I ++ +S + + IDR +L + T
Sbjct: 686 DFDWRRKEVGKLRKQIERFYELISQFAEYEVKGNVELKDIDRWMLHRLNKAIKETTNA 743
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 28.3 bits (63), Expect = 2.4
Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 390 FQVSTQRYAHY--VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDG 447
+ ++ + A + F++L +GF+ + G + L I+ L D+N DG
Sbjct: 25 WAITVEERAKHDQQFHSLK-PISGFITGDQARNFFF--QSGLPQPVLAQIWALADMNNDG 81
Query: 448 VISKDD 453
+ + +
Sbjct: 82 RMDQVE 87
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 27.5 bits (61), Expect = 3.0
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDF--- 322
Y +E T T+ + K + K P S + V LD N ++F +F
Sbjct: 18 YSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVF 77
Query: 323 VKGLSILC 330
V ++ C
Sbjct: 78 VAAITSAC 85
Score = 27.1 bits (60), Expect = 4.1
Identities = 8/43 (18%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDF---VKGLSILC 426
+L + + LD N ++F +F V ++ C
Sbjct: 43 GFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAITSAC 85
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter
jejuni}
Length = 252
Score = 29.0 bits (65), Expect = 3.4
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 152 DELTEQEEYPEFIDHSELTEENIDSPR---YRPQSIEALCRATKFSEAEIKKIYRNFKAE 208
+L Q+ + ++ L + +D + E + K A++K Y K +
Sbjct: 47 QDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVYQEKILNTIKIDAAKVKAFYDQNKDK 106
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal
binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A
2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 27.4 bits (61), Expect = 3.5
Identities = 7/45 (15%), Positives = 21/45 (46%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEE 431
+ + + +F LD N+ ++F++F+ ++I + +
Sbjct: 46 NTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIALKAAHY 90
Score = 27.1 bits (60), Expect = 4.8
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDFVKG 325
Y + T+ + K + K + + + F LD N+ ++F++F+
Sbjct: 21 YSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISL 80
Query: 326 LSILCRGSEE 335
++I + +
Sbjct: 81 VAIALKAAHY 90
>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta
structure, unique N-myristoyltransferase fold; 3.00A
{Homo sapiens} SCOP: d.108.1.2 d.108.1.2
Length = 496
Score = 29.0 bits (64), Expect = 3.7
Identities = 27/147 (18%), Positives = 49/147 (33%), Gaps = 26/147 (17%)
Query: 280 RQDTFKGIYAKFFPCGT------SSYRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGS 333
R+ +GI+ + G + RY H N + F S L R
Sbjct: 269 RRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKF----------SHLSRNM 318
Query: 334 EEEKLRWIFCLYDINGDG---VISKDDLYNIVSSVYELMGTYAYRAFDSG--MVAQRVEY 388
++ ++ L + + D + V++L+ Y + F M + VE+
Sbjct: 319 TMQRTMKLYRLPETPKTAGLRPMETKD----IPVVHQLLTRYLKQ-FHLTPVMSQEEVEH 373
Query: 389 LFQVSTQRYAHYVFNTLDHNKTGFLNF 415
F +V + T FL+F
Sbjct: 374 WFYPQENIIDTFVVENANGEVTDFLSF 400
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex,
membrane protein, endocytosis; HET: ANP; 3.10A {Mus
musculus}
Length = 550
Score = 29.0 bits (64), Expect = 4.5
Identities = 19/146 (13%), Positives = 32/146 (21%), Gaps = 14/146 (9%)
Query: 216 QDTFKGIYAKFFPCGSTYLFHVGCTIKAECPTGTIRQDTFKGIYAKFFPCGSTYLKAECP 275
F + K L + + F P
Sbjct: 375 FTKFHSLKPKLLEALDDMLAQDIAKLMPLLRQEELESVEAGVAGGAFEGTRMGPFVERGP 434
Query: 276 TGTIRQDTFKGIYAKFFPCGTSSYRYAHYVFNTLDHNKTGFLNFED----FVK-GLSILC 330
I + +Y +F L G L+ V L
Sbjct: 435 DEAIEDGEEGSEDDAEWVVTKDKSKYDE-IFYNLA-PADGKLSGSKAKTWMVGTKLP--- 489
Query: 331 RGSEEEKLRWIFCLYDINGDGVISKD 356
L I+ L D++ DG++ +
Sbjct: 490 ----NSVLGRIWKLSDVDRDGMLDDE 511
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 27.1 bits (60), Expect = 4.8
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 292 FPCGTSSYRYAHYVFNTLDHNKTGFLNFEDFVK---GLSILC 330
+ + + LD NK ++F ++V+ L + C
Sbjct: 45 WTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLCLYC 86
Score = 26.7 bits (59), Expect = 5.7
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 387 EYLFQVSTQRYAHYVFNTLDHNKTGFLNFEDFVK---GLSILC 426
+ + + + LD NK ++F ++V+ L + C
Sbjct: 44 TWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLCLYC 86
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center
for structural genomics, J protein structure initiative,
PSI-biology; 2.30A {Bacteroides fragilis}
Length = 398
Score = 28.6 bits (63), Expect = 5.2
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 11/74 (14%)
Query: 347 INGDGVISKDDLYNIVSSVYELMG------TYAYRAFDSGMVAQRVEYLFQVSTQRYAHY 400
G D ++V Y ++G Y Y+ F + VEYL + R ++
Sbjct: 316 TEGG----LDRDLDLVRKAYAIVGTPDNVKIYHYKKFSDPDTRKNVEYLPE-GLDRNEYF 370
Query: 401 VFNTLDHNKTGFLN 414
+D F +
Sbjct: 371 RMVNVDGPNHYFKS 384
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino
acid, aminoacylation, trnaLeu, structural genomics;
2.05A {Pyrococcus horikoshii}
Length = 810
Score = 28.4 bits (63), Expect = 6.3
Identities = 21/113 (18%), Positives = 33/113 (29%), Gaps = 11/113 (9%)
Query: 38 NRDAPF-GTFTNFIRSV-WQKMSGSVSNSSEQEEYPEFIDQNKNFRIVSADPEPLGQAST 95
+ G N ++ QKMS S N ++ AD L S
Sbjct: 630 REEHWPKGIAVNGFGTLEGQKMSKSKGN---------VLNFIDAIEENGADVVRLYIMSL 680
Query: 96 NSASADSSNRDAPFGTFTNFIRSVWQKMSGSVSNSSEQEEYPEFIDREFRVKL 148
+D R G I ++ +S + + IDR +L
Sbjct: 681 AEHDSDFDWRRKEVGKLRKQIERFYELISQFAEYEVKGNVELKDIDRWMLHRL 733
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens}
PDB: 2rgi_A 4duq_A
Length = 98
Score = 26.7 bits (59), Expect = 6.4
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 269 YLKAECPTGTIRQDTFKGIYAKFFPCGTSSYRYAHYV---FNTLDHNKTGFLNFEDF--- 322
Y E + + K + K P + +LD N ++F+++
Sbjct: 20 YSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVF 79
Query: 323 VKGLSILC 330
+ ++++
Sbjct: 80 LALITVMS 87
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand,
cytosolic, calcium, coiled coil, disease mutation,
glycoprotein, ION transport; NMR {Homo sapiens} PDB:
2kle_A 2kq6_A 2y4q_A
Length = 123
Score = 26.9 bits (59), Expect = 6.8
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 310 DHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 357
G LNF++ + L +G + ++ IF YD +GD +++ +
Sbjct: 56 LRQGGGKLNFDELRQDL--KGKGHTDAEIEAIFTKYDQDGDQELTEHE 101
Score = 26.9 bits (59), Expect = 6.8
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 406 DHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDD 453
G LNF++ + L +G + ++ IF YD +GD +++ +
Sbjct: 56 LRQGGGKLNFDELRQDL--KGKGHTDAEIEAIFTKYDQDGDQELTEHE 101
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.134 0.404
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,398,648
Number of extensions: 441573
Number of successful extensions: 2122
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1639
Number of HSP's successfully gapped: 548
Length of query: 487
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 390
Effective length of database: 3,993,456
Effective search space: 1557447840
Effective search space used: 1557447840
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.4 bits)