BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2871
(178 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|110767982|ref|XP_624411.2| PREDICTED: hypothetical protein LOC552027 [Apis mellifera]
gi|380027797|ref|XP_003697603.1| PREDICTED: uncharacterized protein LOC100868777 [Apis florea]
Length = 378
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
+K +DD K EPE +RK+FIGGLDYRTTD+SL+ FE+WGEIVDVVVMKDP TKRSRGF
Sbjct: 2 VKMEHDDGK-NEPEHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGF 60
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQE 119
GFITYS A MVDDA + RPH +DGRVVE KRAVPR EIG+PEA ATVKK+FVGGLK D E
Sbjct: 61 GFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHE 120
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EDDL++YF +GTI S+++VT+KETG KRGF F+EF+DYD VDKI L + + + V+
Sbjct: 121 EDDLKQYFQSYGTINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVD 179
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+F+GGL ++ L+ +F+ +G I + ++ D T + RGFGF
Sbjct: 94 PRQEIGRPEAGATVKKLFVGGLKDDHEEDDLKQYFQSYGTINSISIVTDKETGKKRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD R H I G+ V+ K+A+ + E+
Sbjct: 154 VEFDDYDPVDKICLQRNHQIRGKHVDVKKALSKAEM 189
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
+K +DD K EPE +RK+FIGGLDYRTTD+SL+ FE+WGEIVDVVVMKDP TKRSRGF
Sbjct: 2 VKMEHDDGK-NEPEHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGF 60
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQE 119
GFITYS A MVDDA + RPH +DGRVVE KRAVPR EIG+PEA ATVKK+FVGGLK D E
Sbjct: 61 GFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHE 120
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E+DLR+YF +G+I S+++VT+KETG KRGF F+EF+DYD VDKI L + + + V+
Sbjct: 121 EEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVD 179
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+F+GGL +E L+ +F+ +G I + ++ D T + RGFGF
Sbjct: 94 PRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD R H I G+ V+ K+A+ + E+
Sbjct: 154 VEFDDYDPVDKICLQRNHQIRGKHVDVKKALSKAEM 189
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 118/169 (69%), Positives = 140/169 (82%), Gaps = 1/169 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
EPE +RK+FIGGLDYRTTD+SL+ FEQWGEIVDVVVMKDP TKRSRGFGFITYS A M
Sbjct: 42 NEPEHVRKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHM 101
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VDDA + RPH +DGRVVE KRAVPR EIG+PEA ATVKK+FVGGLK D EE+DLR+YF
Sbjct: 102 VDDAQNARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQS 161
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+G+I S+++VT+KETG KRGF F+EF+DYD VDKI L + + + V+
Sbjct: 162 YGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVD 210
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+F+GGL +E L+ +F+ +G I + ++ D T + RGFGF
Sbjct: 125 PRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGF 184
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD R H I G+ V+ K+A+ R E+
Sbjct: 185 VEFDDYDPVDKICLQRNHQIRGKHVDVKKALSRAEM 220
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 80 HNIDGRVVETKRAVPRD---------------EIGKPEANATVKKMFVGGLKDQEEDD-L 123
H+ D RV+E V R E GK E V+K+F+GGL + DD L
Sbjct: 6 HSPDTRVIEYYSKVLRQCRKMLAMPMFATVSQEDGKNEPE-HVRKLFIGGLDYRTTDDSL 64
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
+++F Q+G I V ++ + +T RGF FI ++ +VD
Sbjct: 65 KKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVD 103
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
+K +DD K EPE +RK+FIGGLDYRTTD+SL+ FE+WGEIVDVVVMKDP TKRSRGF
Sbjct: 2 VKMEHDDGK-NEPEHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGF 60
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQE 119
GFITYS A MVDDA + RPH +DGRVVE KRAVPR EIG+PEA ATVKK+FVGGLK D E
Sbjct: 61 GFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHE 120
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E+DLR+YF +G+I S+++VT+KETG KRGF F+EF+DYD VDKI L + + + V+
Sbjct: 121 EEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVD 179
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+F+GGL +E L+ +F+ +G I + ++ D T + RGFGF
Sbjct: 94 PRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD R H I G+ V+ K+A+ R E+
Sbjct: 154 VEFDDYDPVDKICLQRNHQIRGKHVDVKKALSRAEM 189
>gi|153792009|ref|NP_001093319.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
gi|95102934|gb|ABF51408.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
Length = 316
Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
MKP EPE RK+FIGGLDYRTTD SL+ F+EQWGEIVDVVVMKDP TKRS+GF
Sbjct: 1 MKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGF 60
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQE 119
GFITYS+A MVD+A +NRPH IDGR+VE KRAVPR+EI +PEA+ATVKK+FV GLK D E
Sbjct: 61 GFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIE 120
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E+DLREYFS FG I SV++VT+KETG KRGF F+EF+DYD VD++ L + + D+ ++
Sbjct: 121 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLD 179
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+F+ GL +E L+ +F +G IV V V+ D T + RGFGF
Sbjct: 94 PREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD + H I + ++ K+A+ + ++
Sbjct: 154 VEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISKTDM 189
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/169 (69%), Positives = 140/169 (82%), Gaps = 1/169 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
EPE +RK+FIGGLDYRTTD+SL+ FEQWGEIVDVVVMKDP TKRSRGFGFITYS A M
Sbjct: 4 NEPEHVRKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHM 63
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VDDA + RPH +DGRVVE KRAVPR EIG+PEA ATVKK+FVGGLK D EE+DLR+YF
Sbjct: 64 VDDAQNARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQS 123
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+G+I S+++VT+KETG KRGF F+EF+DYD VDKI L + + + V+
Sbjct: 124 YGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVD 172
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+F+GGL +E L+ +F+ +G I + ++ D T + RGFGF
Sbjct: 87 PRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGF 146
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD R H I G+ V+ K+A+ R E+
Sbjct: 147 VEFDDYDPVDKICLQRNHQIRGKHVDVKKALSRAEM 182
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
+K ++D K EPE +RK+FIGGLDYRTTD+SL+ FE+WGEIVDVVVMKDP TKRSRGF
Sbjct: 2 VKMEHEDGK-NEPEHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGF 60
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQE 119
GFITYS A MVDDA + RPH +DGRVVE KRAVPR EIG+PEA ATVKK+FVGGLK D E
Sbjct: 61 GFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHE 120
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E+DLR+YF +G+I S+++VT+KETG KRGF F+EF+DYD VDKI L + + + V+
Sbjct: 121 EEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVD 179
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+F+GGL +E L+ +F+ +G I + ++ D T + RGFGF
Sbjct: 94 PRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD R H I G+ V+ K+A+ + E+
Sbjct: 154 VEFDDYDPVDKICLQRNHQIRGKHVDVKKALSKAEM 189
>gi|156549026|ref|XP_001607355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Nasonia vitripennis]
Length = 371
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 144/179 (80%), Gaps = 2/179 (1%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
+K +DD K EPE +RK+FIGGLDYRTTD+SL+ FEQWG+IVDVVVMKDP TKRSRGF
Sbjct: 2 VKMEHDDGK-NEPEHVRKLFIGGLDYRTTDDSLKKHFEQWGDIVDVVVMKDPKTKRSRGF 60
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQE 119
GFITYS A MVDDA + RPH +DGRVVE KRAVPR EIG+PEA ATVKK+FVGGLK D E
Sbjct: 61 GFITYSRAHMVDDAQNARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHE 120
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EDDLR YF +G I SV++VT+K+TG KRGF F+EF+DYD VDKI L + + + V+
Sbjct: 121 EDDLRVYFQGYGNINSVSIVTDKDTGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVD 179
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+F+GGL ++ L+ +F+ +G I V ++ D T + RGFGF
Sbjct: 94 PRQEIGRPEAGATVKKLFVGGLKDDHEEDDLRVYFQGYGNINSVSIVTDKDTGKKRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD R H I G+ V+ K+A+ R E+
Sbjct: 154 VEFDDYDPVDKICLQRNHQIRGKHVDVKKALSRAEM 189
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/169 (68%), Positives = 139/169 (82%), Gaps = 1/169 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
+EPE RK+FIGGLDY+TT+ESL+ FEQWGE+VD VVM+DP TK+SRGFGFIT+ A M
Sbjct: 8 SEPEQFRKLFIGGLDYKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHM 67
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 129
VDDA + RPH +DGR VE KRAVPR+E G+PEA ATVKK+FVGGLKD +E DLR+YFSQ
Sbjct: 68 VDDAQAARPHKVDGREVEPKRAVPREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFSQ 127
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG I SVN+VT K+TG KRGFAF+E++DYD VDKIVL + +L +R E
Sbjct: 128 FGNILSVNLVTEKDTGRKRGFAFVEYDDYDPVDKIVLKRHHMLKGKRTE 176
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++KVF+GGL + L+ +F Q+G I+ V ++ + T R RGF F
Sbjct: 91 PREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFSQFGNILSVNLVTEKDTGRKRGFAF 150
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ Y + VD + R H + G+ E K+A+ + E+
Sbjct: 151 VEYDDYDPVDKIVLKRHHMLKGKRTEVKKALSKQEM 186
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/168 (69%), Positives = 140/168 (83%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE +RK+FIGGLDYRTTDESL+ FEQWGEIVDVVVMKDP TKRSRGFGFITYS A MV
Sbjct: 12 EPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMV 71
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
DDA + RPH +DGRVVE KRAVPR EIG+PEA ATVKK+FVGG+K++ EE+DLR+YF Q+
Sbjct: 72 DDAQNARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQY 131
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+ S +V +KET KRGFAF+EF+DYD VDKI LS+ + + ++
Sbjct: 132 GTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQIRGKHID 179
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 54/93 (58%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+F+GG+ + L+ +F+Q+G +V ++ D T++ RGF F
Sbjct: 94 PRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD +R H I G+ ++ K+A+P+
Sbjct: 154 VEFDDYDPVDKICLSRNHQIRGKHIDVKKALPK 186
>gi|195329210|ref|XP_002031304.1| GM25918 [Drosophila sechellia]
gi|194120247|gb|EDW42290.1| GM25918 [Drosophila sechellia]
Length = 385
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 5 YDDSK-CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTDE L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDGEEITEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+
Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF FG I SVN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLD 186
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H+I + ++ K+A+ + ++
Sbjct: 161 IEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 5 YDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
+DD TEPE +RK+FIGGLDYRT+DE+L+A FE+WG+IVDVVVMKDP TKRSRGFGFIT
Sbjct: 18 HDDDSITEPEHMRKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFIT 77
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
YS + M+D+A RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E L
Sbjct: 78 YSHSSMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSL 137
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YFS FG+I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 138 RDYFSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 192
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 55/93 (59%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++SL+ +F +G IVD+ ++ D T + RGF F
Sbjct: 107 PRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFSNFGSIVDINIVMDKETGKKRGFAF 166
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 167 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 199
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
++DD TEPE +RK+FIGGLDYRTTD++L+A FE+WG+IVDVVVMKDP TKRSRGFGFI
Sbjct: 14 QHDDDSITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFI 73
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS + MVD+A RPH IDGRVVE KRAVPR EI P A ATVKK+FVG LK D +E
Sbjct: 74 TYSHSSMVDEAQKARPHKIDGRVVEPKRAVPRQEIDSPNAGATVKKLFVGALKDDHDEQS 133
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LR+YF +G+I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 134 LRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 189
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+G L ++SL+ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 104 PRQEIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAF 163
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 164 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
>gi|357619642|gb|EHJ72132.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 307
Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/168 (69%), Positives = 139/168 (82%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGLDY TTD SL+ F+EQWG+IVDVVVMKDP TKRSRGFGFITYS A MV
Sbjct: 19 EPEHTRKLFIGGLDYCTTDTSLKEFYEQWGDIVDVVVMKDPQTKRSRGFGFITYSRAHMV 78
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
DDA NRPH IDGR+VE KRAVPR+EI +P+A+ATVKK+F+GG+K D EE+DLREYFS+F
Sbjct: 79 DDAQKNRPHKIDGRIVEPKRAVPREEIKRPDASATVKKLFIGGIKQDIEEEDLREYFSKF 138
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I SV++VT K+TG KRGF FIEF+DYD VD+I L + RR++
Sbjct: 139 GEIISVSLVTEKDTGKKRGFGFIEFDDYDPVDRICLQPSHKVKGRRLD 186
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++K+FIGG+ +E L+ +F ++GEI+ V ++ + T + RGFGF
Sbjct: 101 PREEIKRPDASATVKKLFIGGIKQDIEEEDLREYFSKFGEIISVSLVTEKDTGKKRGFGF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
I + + VD H + GR ++ K+A+ +
Sbjct: 161 IEFDDYDPVDRICLQPSHKVKGRRLDVKKAISK 193
>gi|195113429|ref|XP_002001270.1| GI10692 [Drosophila mojavensis]
gi|193917864|gb|EDW16731.1| GI10692 [Drosophila mojavensis]
Length = 379
Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D + +EPE LRK+FIGGLDYRTTDE L+A FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 14 NDEQISEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLR 124
S++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+ LR
Sbjct: 74 SQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLR 133
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG I VN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 134 EYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHTIKNKTLD 187
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+++G+IV V ++ D T + RGF F
Sbjct: 102 PRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAF 161
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H I + ++ K+A+ + ++
Sbjct: 162 IEFDDYDPVDKIILQKTHTIKNKTLDVKKAIAKQDM 197
>gi|24650838|ref|NP_733252.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|24650840|ref|NP_733253.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
gi|157651|gb|AAA28621.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|16769554|gb|AAL28996.1| LD38464p [Drosophila melanogaster]
gi|23172512|gb|AAN14143.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|23172513|gb|AAN14144.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
Length = 361
Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/169 (66%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
Query: 5 YDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
+DD TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFIT
Sbjct: 15 HDDDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 74
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
YS + M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +
Sbjct: 75 YSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSI 134
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
R+YF FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L
Sbjct: 135 RDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQL 183
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++S++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 104 PRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAF 163
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 164 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 96 DEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI
Sbjct: 18 DSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 74
Query: 155 FNDYDVVDKIVLSKITLLLDRRVE 178
++ ++D+ S+ + R VE
Sbjct: 75 YSHSSMIDEAQKSRPHKIDGRVVE 98
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
++DD TEPE +RK+FIGGLDYRTTD++L+A FE+WG+IVDVVVMKDP TKRSRGFGFI
Sbjct: 14 QHDDDSITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFI 73
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS + MVD+A RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E
Sbjct: 74 TYSHSSMVDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQS 133
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LR+YF +G+I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 134 LRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 189
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++SL+ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 104 PRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAF 163
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 164 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
>gi|829184|emb|CAA41170.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 386
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 5 YDDSK-CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTD+ L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+
Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF FG I SVN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLD 186
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H+I + ++ K+A+ + ++
Sbjct: 161 IEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196
>gi|17136624|ref|NP_476807.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform A
[Drosophila melanogaster]
gi|281361714|ref|NP_001163602.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform C
[Drosophila melanogaster]
gi|442618907|ref|NP_001262538.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform D
[Drosophila melanogaster]
gi|442618909|ref|NP_476806.2| heterogeneous nuclear ribonucleoprotein at 87F, isoform E
[Drosophila melanogaster]
gi|78099792|sp|P48810.2|RB87F_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 87F; AltName:
Full=HRP36.1 protein; AltName: Full=Protein P11
gi|7299788|gb|AAF54967.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform A
[Drosophila melanogaster]
gi|45825065|gb|AAS77440.1| LD32727p [Drosophila melanogaster]
gi|220951504|gb|ACL88295.1| Hrb87F-PA [synthetic construct]
gi|220959722|gb|ACL92404.1| Hrb87F-PA [synthetic construct]
gi|272476964|gb|ACZ94899.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform C
[Drosophila melanogaster]
gi|325530374|gb|ADZ25120.1| MIP15350p [Drosophila melanogaster]
gi|440217389|gb|AGB95920.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform D
[Drosophila melanogaster]
gi|440217390|gb|AAN13574.2| heterogeneous nuclear ribonucleoprotein at 87F, isoform E
[Drosophila melanogaster]
Length = 385
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 5 YDDSK-CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTD+ L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+
Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF FG I SVN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLD 186
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H+I + ++ K+A+ + ++
Sbjct: 161 IEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196
>gi|8094|emb|CAA38574.1| Hrb87F [Drosophila melanogaster]
Length = 386
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 5 YDDSK-CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTD+ L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+
Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF FG I SVN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLD 186
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H+I + ++ K+A+ + ++
Sbjct: 161 IEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196
>gi|8318|emb|CAA42212.1| P11 (hnRNP protein) [Drosophila melanogaster]
Length = 386
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 5 YDDSK-CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTD+ L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+
Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF FG I SVN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLD 186
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H+I + ++ K+A+ + ++
Sbjct: 161 IEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196
>gi|195036930|ref|XP_001989921.1| GH19058 [Drosophila grimshawi]
gi|193894117|gb|EDV92983.1| GH19058 [Drosophila grimshawi]
Length = 379
Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D + +EPE LRK+FIGGLDYRTTDE L+A FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 14 NDEQISEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLR 124
S++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+ LR
Sbjct: 74 SQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLR 133
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG I VN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 134 EYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHNIKNKTLD 187
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+++G+IV V ++ D T + RGF F
Sbjct: 102 PRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAF 161
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + HNI + ++ K+A+ + ++
Sbjct: 162 IEFDDYDPVDKIILQKTHNIKNKTLDVKKAIAKQDM 197
>gi|195390403|ref|XP_002053858.1| GJ23111 [Drosophila virilis]
gi|194151944|gb|EDW67378.1| GJ23111 [Drosophila virilis]
Length = 382
Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D + +EPE LRK+FIGGLDYRTTDE L+A FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 14 NDEQISEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLR 124
S++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+ LR
Sbjct: 74 SQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLR 133
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG I VN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 134 EYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHNIKNKTLD 187
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+++G+IV V ++ D T + RGF F
Sbjct: 102 PRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAF 161
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + HNI + ++ K+A+ + ++
Sbjct: 162 IEFDDYDPVDKIILQKTHNIKNKTLDVKKAIAKQDM 197
>gi|195451840|ref|XP_002073098.1| GK13334 [Drosophila willistoni]
gi|194169183|gb|EDW84084.1| GK13334 [Drosophila willistoni]
Length = 402
Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/174 (66%), Positives = 140/174 (80%), Gaps = 1/174 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D + +EPE LRK+FIGGLDYRTTDE L+A FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 14 NDEQISEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLR 124
S++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+ LR
Sbjct: 74 SQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLR 133
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF FG I VN+V++KETG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 134 EYFKDFGQIVGVNIVSDKETGKKRGFAFIEFDDYDPVDKIILQKSHTIKNKTLD 187
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 102 PRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKETGKKRGFAF 161
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H I + ++ K+A+ + ++
Sbjct: 162 IEFDDYDPVDKIILQKSHTIKNKTLDVKKAIAKQDM 197
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/168 (69%), Positives = 135/168 (80%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGLDYRTTDESL+ FE+WGEIVDVVVMKDP TKRSRGFGFITYS A MV
Sbjct: 14 EHEQYRKLFIGGLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFITYSRAHMV 73
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
DDA ++RPH +DGRVVE KRAVPR +IG+PEA ATVKK+FVGGLKD EE+DLRE F +
Sbjct: 74 DDAQNDRPHKVDGRVVEPKRAVPRQDIGRPEAGATVKKLFVGGLKDDVEEEDLRECFKSY 133
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GTI S +VT+K+TG KRGF FIEF DYD VDKI L + + + ++
Sbjct: 134 GTILSCTIVTDKDTGKKRGFGFIEFEDYDPVDKICLYRHHQIHGKHID 181
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D + +++K+F+GGL +E L+ F+ +G I+ ++ D T + RGFGF
Sbjct: 96 PRQDIGRPEAGATVKKLFVGGLKDDVEEEDLRECFKSYGTILSCTIVTDKDTGKKRGFGF 155
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD R H I G+ ++ K+A+ + E+
Sbjct: 156 IEFEDYDPVDKICLYRHHQIHGKHIDVKKALSKAEM 191
>gi|198452965|ref|XP_002137573.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
gi|198132155|gb|EDY68131.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
Length = 401
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 140/174 (80%), Gaps = 1/174 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D + TEPE LRK+FIGGLDYRTTD+ L+A FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 14 NDEQITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLR 124
S++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+ LR
Sbjct: 74 SQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLR 133
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF FG I VN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 134 EYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHTIKNKSLD 187
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 102 PRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAF 161
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H I + ++ K+A+ + ++
Sbjct: 162 IEFDDYDPVDKIILQKTHTIKNKSLDVKKAIAKQDM 197
>gi|11036|emb|CAA44502.1| hrp36.1 [Drosophila melanogaster]
Length = 326
Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 5 YDDSK-CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTD+ L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+
Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF FG I SVN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLD 186
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H+I + ++ K+A+ + ++
Sbjct: 161 IEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196
>gi|357619641|gb|EHJ72131.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 315
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/168 (67%), Positives = 139/168 (82%), Gaps = 1/168 (0%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
M+P+ D EPE RK+FIGGL+YRT+DESL+A FE+WGEIVDVVVMKDP TKRSRGF
Sbjct: 1 MRPQNGDDGFDEPEVHRKIFIGGLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGF 60
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQE 119
GFITYS+A MVDDA NRPH IDGR+VETKRAV R +I PEA ATVKK+F+GG+K D +
Sbjct: 61 GFITYSKAHMVDDAQLNRPHRIDGRMVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHD 120
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
E+ LREYFS +G +++V++VT+K TG KRGF F+EF+DYD VDKI L+
Sbjct: 121 EEQLREYFSNYGNVQNVSIVTDKGTGKKRGFGFVEFDDYDPVDKICLN 168
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 52/82 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+FIGG+ +E L+ +F +G + +V ++ D T + RGFGF+ + + VD
Sbjct: 106 TVKKLFIGGIKDDHDEEQLREYFSNYGNVQNVSIVTDKGTGKKRGFGFVEFDDYDPVDKI 165
Query: 75 MSNRPHNIDGRVVETKRAVPRD 96
N PH I+G+ ++ K+A+P+D
Sbjct: 166 CLNAPHKINGKQLDVKKALPKD 187
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 96 DEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D +PE + +K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF FI
Sbjct: 8 DGFDEPEVH---RKIFIGGLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFIT 64
Query: 155 FNDYDVVDKIVLSKITLLLDRRVE 178
++ +VD L++ + R VE
Sbjct: 65 YSKAHMVDDAQLNRPHRIDGRMVE 88
>gi|194906902|ref|XP_001981451.1| GG11603 [Drosophila erecta]
gi|190656089|gb|EDV53321.1| GG11603 [Drosophila erecta]
Length = 358
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 5 YDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
+DD TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFIT
Sbjct: 15 HDDDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 74
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
YS + M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +
Sbjct: 75 YSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQCI 134
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YF FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 135 RDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 189
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 55/93 (59%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++ ++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 104 PRQDIDSPNAGATVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAF 163
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 164 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
>gi|194741290|ref|XP_001953122.1| GF17368 [Drosophila ananassae]
gi|190626181|gb|EDV41705.1| GF17368 [Drosophila ananassae]
Length = 385
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 141/176 (80%), Gaps = 2/176 (1%)
Query: 5 YDDS-KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTDE L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDCDEITEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+
Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF FG I VN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 131 LREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKNHTIKNKSLD 186
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H I + ++ K+A+ + ++
Sbjct: 161 IEFDDYDPVDKIILQKNHTIKNKSLDVKKAIAKQDM 196
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
++DD +EPE +RK+FIGGLDYRTTD++L+A FE+WG+IVDVVVMKDP TKRSRGFGFI
Sbjct: 14 QHDDDSISEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFI 73
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS + MVD+A RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E
Sbjct: 74 TYSHSSMVDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQS 133
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LR+YF +G I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 134 LRDYFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 189
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++SL+ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 104 PRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGNIVDINIVMDKETGKKRGFAF 163
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 164 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
>gi|195500856|ref|XP_002097553.1| GE24426 [Drosophila yakuba]
gi|194183654|gb|EDW97265.1| GE24426 [Drosophila yakuba]
Length = 391
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
Query: 5 YDDS-KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTDE L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDGDEITEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS++ M+D+A RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+
Sbjct: 71 TYSQSYMIDNAQDARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF FG I VN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 131 LREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKNHTIKNKSLD 186
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H I + ++ K+A+ + ++
Sbjct: 161 IEFDDYDPVDKIILQKNHTIKNKSLDVKKAIAKQDM 196
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 136/173 (78%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
D + TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 16 DDEITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 75
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
+ M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E LR+
Sbjct: 76 HSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRD 135
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 136 YFQNFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLKGKMVD 188
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 55/93 (59%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++SL+ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 103 PRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQNFGNIVDINIVMDKETGKKRGFAF 162
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H + G++V+ K+A+P+
Sbjct: 163 VEFDDYDPVDKVVLQKQHQLKGKMVDVKKALPK 195
>gi|194901402|ref|XP_001980241.1| GG17033 [Drosophila erecta]
gi|190651944|gb|EDV49199.1| GG17033 [Drosophila erecta]
Length = 392
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 141/176 (80%), Gaps = 2/176 (1%)
Query: 5 YDDS-KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTD+ L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDGDEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
TYS++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+ D +E+
Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF FG I VN+V++K+TG KRGFAFIEF+DYD VDKI+L K + ++ ++
Sbjct: 131 LREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKNHTIKNKSLD 186
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
I + + VD + + H I + ++ K+A+ + ++
Sbjct: 161 IEFDDYDPVDKIILQKNHTIKNKSLDVKKAIAKQDM 196
>gi|24650833|ref|NP_733250.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|157653|gb|AAA28623.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172510|gb|AAN14141.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|259089588|gb|ACV91650.1| RE34829p [Drosophila melanogaster]
Length = 360
Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
D TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 16 DDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 75
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
+ M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +R+
Sbjct: 76 HSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRD 135
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 136 YFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 188
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++S++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 103 PRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAF 162
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 163 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 195
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 136/173 (78%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
D TEPE +RK+FIGGLDYRTTD++L+A FE+WG+IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 16 DDDITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYS 75
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
+ M+D+A RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E LR+
Sbjct: 76 HSTMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRD 135
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF FG+I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 136 YFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 188
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++SL+ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 103 PRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAF 162
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 163 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 195
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 136/173 (78%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
D TEPE +RK+FIGGLDYRTTD++L+A FE+WG+IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 16 DDDITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYS 75
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
+ M+D+A RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E LR+
Sbjct: 76 HSTMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRD 135
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF FG+I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 136 YFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 188
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++SL+ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 103 PRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAF 162
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 163 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 195
>gi|195503537|ref|XP_002098694.1| GE23791 [Drosophila yakuba]
gi|194184795|gb|EDW98406.1| GE23791 [Drosophila yakuba]
Length = 356
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/174 (64%), Positives = 136/174 (78%), Gaps = 1/174 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 15 EDDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY 74
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLR 124
S + M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +R
Sbjct: 75 SHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQCIR 134
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+YF FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 135 DYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 188
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 55/93 (59%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++ ++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 103 PRQDIDSPNAGATVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAF 162
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 163 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 195
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/159 (69%), Positives = 130/159 (81%), Gaps = 1/159 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFITYS + M
Sbjct: 2611 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 2670
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +R+YF
Sbjct: 2671 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQN 2730
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K
Sbjct: 2731 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK 2769
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++S++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 2694 PRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAF 2753
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 2754 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 2786
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 95 RDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
+D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI
Sbjct: 2607 QDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFI 2663
Query: 154 EFNDYDVVDK 163
++ ++D+
Sbjct: 2664 TYSHSSMIDE 2673
>gi|17738267|ref|NP_524543.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|24650836|ref|NP_733251.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
gi|133253|sp|P07909.1|ROA1_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=PEN repeat clone P9;
AltName: Full=hnRNP core protein A1-A
gi|157654|gb|AAA28624.1| nulcear ribonucleoprotein [Drosophila melanogaster]
gi|908757|gb|AAA70426.1| unknown protein [Drosophila melanogaster]
gi|7301687|gb|AAF56801.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|23172511|gb|AAN14142.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
Length = 365
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
Query: 10 CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFITYS +
Sbjct: 24 ITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSS 83
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 128
M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +R+YF
Sbjct: 84 MIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQ 143
Query: 129 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 144 HFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 193
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++S++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 108 PRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAF 167
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 168 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 200
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 94 PRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAF 152
P+D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF F
Sbjct: 20 PQDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGF 76
Query: 153 IEFNDYDVVDKIVLSKITLLLDRRVE 178
I ++ ++D+ S+ + R VE
Sbjct: 77 ITYSHSSMIDEAQKSRPHKIDGRVVE 102
>gi|195353064|ref|XP_002043030.1| GM16385 [Drosophila sechellia]
gi|194127095|gb|EDW49138.1| GM16385 [Drosophila sechellia]
Length = 363
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
Query: 10 CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFITYS +
Sbjct: 22 ITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSS 81
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 128
M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +R+YF
Sbjct: 82 MIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQ 141
Query: 129 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 142 NFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 191
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++S++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 106 PRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAF 165
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 166 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 198
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 95 RDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
+D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI
Sbjct: 19 QDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFI 75
Query: 154 EFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++D+ S+ + R VE
Sbjct: 76 TYSHSSMIDEAQKSRPHKIDGRVVE 100
>gi|24650831|ref|NP_733249.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
gi|157652|gb|AAA28622.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172509|gb|AAF56800.2| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
Length = 364
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
Query: 10 CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFITYS +
Sbjct: 23 ITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSS 82
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 128
M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +R+YF
Sbjct: 83 MIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQ 142
Query: 129 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 143 HFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 192
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++S++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 107 PRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAF 166
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 167 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 199
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 94 PRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAF 152
P+D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF F
Sbjct: 19 PQDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGF 75
Query: 153 IEFNDYDVVDKIVLSKITLLLDRRVE 178
I ++ ++D+ S+ + R VE
Sbjct: 76 ITYSHSSMIDEAQKSRPHKIDGRVVE 101
>gi|317453642|gb|ADV19029.1| AT02853p [Drosophila melanogaster]
Length = 372
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
Query: 10 CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFITYS +
Sbjct: 31 ITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSS 90
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 128
M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +R+YF
Sbjct: 91 MIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQ 150
Query: 129 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 151 HFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 200
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++S++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 115 PRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAF 174
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 175 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 207
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 94 PRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAF 152
P+D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF F
Sbjct: 27 PQDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGF 83
Query: 153 IEFNDYDVVDKIVLSKITLLLDRRVE 178
I ++ ++D+ S+ + R VE
Sbjct: 84 ITYSHSSMIDEAQKSRPHKIDGRVVE 109
>gi|317183317|gb|ADV15462.1| LD46071p [Drosophila melanogaster]
Length = 396
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
Query: 10 CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFITYS +
Sbjct: 55 ITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSS 114
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 128
M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LK D +E +R+YF
Sbjct: 115 MIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQ 174
Query: 129 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K L + V+
Sbjct: 175 HFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 224
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++S++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 139 PRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAF 198
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 199 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 231
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 94 PRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAF 152
P+D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF F
Sbjct: 51 PQDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGF 107
Query: 153 IEFNDYDVVDKIVLSKITLLLDRRVE 178
I ++ ++D+ S+ + R VE
Sbjct: 108 ITYSHSSMIDEAQKSRPHKIDGRVVE 133
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/169 (66%), Positives = 138/169 (81%), Gaps = 2/169 (1%)
Query: 1 MKPRYD-DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRG 59
M+P+ + D EPE RK+FIGGL+YRTTDESL+A FE+WGEIVDVVVMKD TKRSRG
Sbjct: 1 MRPQQNGDDGYEEPEVHRKIFIGGLNYRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRG 60
Query: 60 FGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQ 118
FGFITYS+A MVDDA +NRPH ID RVVETKRAV R +I PEA ATV+K+F+GG+K D
Sbjct: 61 FGFITYSKAHMVDDAQNNRPHTIDSRVVETKRAVARQDIKNPEAGATVRKLFIGGIKDDH 120
Query: 119 EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
ED LREYFS +G +++V++VT+K TG KRGF F+EF+DYD VDK+ L+
Sbjct: 121 TEDQLREYFSNYGNVQNVSIVTDKATGKKRGFGFVEFDDYDPVDKVCLN 169
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
++RK+FIGG+ T++ L+ +F +G + +V ++ D T + RGFGF+ + + VD
Sbjct: 107 TVRKLFIGGIKDDHTEDQLREYFSNYGNVQNVSIVTDKATGKKRGFGFVEFDDYDPVDKV 166
Query: 75 MSNRPHNIDGRVVETKRAVPRD 96
N PH I+G+ ++ K+A+P+D
Sbjct: 167 CLNAPHKINGKQLDVKKALPKD 188
>gi|193575575|ref|XP_001951661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 303
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 137/167 (82%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL+Y TT++SL+ FFE+WG+IVDVVVMKDP+TKRSRGFGFITYS+A MV
Sbjct: 13 EPEQFRKLFIGGLNYTTTNDSLKEFFEKWGDIVDVVVMKDPVTKRSRGFGFITYSKASMV 72
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
DDAM+NRPH IDGR VETKRAVPRD+I KP+ TVKKMFV G+K+Q E+DL+EYF Q+G
Sbjct: 73 DDAMANRPHKIDGREVETKRAVPRDDIDKPDIAWTVKKMFVSGIKEQAEEDLKEYFGQYG 132
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I ++ ++ +KETG ++GF FIEF+D D VDK VL K + ++E
Sbjct: 133 NILNIQIIADKETGQRKGFGFIEFDDSDSVDKAVLIKTHEVSGSKLE 179
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D K +++K+F+ G+ +E L+ +F Q+G I+++ ++ D T + +GFGF
Sbjct: 95 PRDDIDKPDIAWTVKKMFVSGIK-EQAEEDLKEYFGQYGNILNIQIIADKETGQRKGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
I + ++ VD A+ + H + G +E K+AV +D
Sbjct: 154 IEFDDSDSVDKAVLIKTHEVSGSKLEVKKAVSKD 187
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/168 (64%), Positives = 134/168 (79%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+F+GGLDY+TTDE+L+ +FEQWGEI+DVVVMKDP TKRSRGFGFITY+ A MV
Sbjct: 3 EPEHLRKLFVGGLDYKTTDENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFITYAAAHMV 62
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
DDA RPH IDGR VE KRAVP+ +IGKPEA ATVKK+FVG L D E+DL+EYFS +
Sbjct: 63 DDAQGARPHKIDGRTVEPKRAVPKTDIGKPEAGATVKKLFVGLLNDSITEEDLKEYFSPY 122
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G + S +V +KETG KRGF F+EF+DYD VDKI L ++ ++++
Sbjct: 123 GNVTSAALVVHKETGKKRGFGFVEFDDYDPVDKICLKGSHIIKGKKID 170
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
P+ D K +++K+F+G L+ T+E L+ +F +G + ++ T + RGFGF
Sbjct: 85 PKTDIGKPEAGATVKKLFVGLLNDSITEEDLKEYFSPYGNVTSAALVVHKETGKKRGFGF 144
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEA 103
+ + + VD H I G+ ++ K+A+ ++E+ + A
Sbjct: 145 VEFDDYDPVDKICLKGSHIIKGKKIDVKKALSKEEMARVNA 185
>gi|328709829|ref|XP_001950969.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 349
Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 110/157 (70%), Positives = 132/157 (84%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL+Y TT++SL+ FFEQWGEIVDVVVMKDP TKRSRGFGFITYS++ MV
Sbjct: 5 EPEQYRKLFIGGLNYTTTNDSLKEFFEQWGEIVDVVVMKDPQTKRSRGFGFITYSQSSMV 64
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AMSNRPH IDGR VETKRAVPRD+I KP+ ATVKKMFV G+K+Q E+DL EYF +FG
Sbjct: 65 DQAMSNRPHKIDGREVETKRAVPRDDIDKPDIAATVKKMFVSGIKEQSENDLLEYFGKFG 124
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
I +V +VT+K++G ++GF FIE++D D VDK VL K
Sbjct: 125 NITNVTIVTDKDSGQRKGFGFIEYDDTDSVDKAVLIK 161
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D K +++K+F+ G+ ++ ++ L+ +F ++G I +V ++ D + + +GFGF
Sbjct: 87 PRDDIDKPDIAATVKKMFVSGIKEQSENDLLE-YFGKFGNITNVTIVTDKDSGQRKGFGF 145
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAV 93
I Y + VD A+ + H + G ++ K+A+
Sbjct: 146 IEYDDTDSVDKAVLIKSHQVAGGKLDVKKAI 176
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+F+GGL D L+E+F Q+G I V ++ + +T RGF FI ++ +VD+ +
Sbjct: 10 RKLFIGGLNYTTTNDSLKEFFEQWGEIVDVVVMKDPQTKRSRGFGFITYSQSSMVDQAMS 69
Query: 167 SKITLLLDRRVE 178
++ + R VE
Sbjct: 70 NRPHKIDGREVE 81
>gi|321463296|gb|EFX74313.1| hypothetical protein DAPPUDRAFT_307331 [Daphnia pulex]
Length = 393
Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/156 (71%), Positives = 133/156 (85%), Gaps = 1/156 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGLDYRTTDESL+ FEQWG+IVDVVVMKDP T++SRGFGF+TY+ A MV
Sbjct: 39 EAEQFRKLFIGGLDYRTTDESLKKHFEQWGQIVDVVVMKDPKTRKSRGFGFVTYARAFMV 98
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
D+A + RPH +DGR VE KRAVPRD IGKPEA++TVKK+FVGGL+D EE+DL++YFS F
Sbjct: 99 DEAQAARPHRVDGREVEPKRAVPRDLIGKPEASSTVKKLFVGGLRDDVEEEDLQKYFSTF 158
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
G I SVN+VT KET KRGFAF+EF+DYD VDK+VL
Sbjct: 159 GPIASVNVVTEKETNKKRGFAFVEFDDYDPVDKVVL 194
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR K +++K+F+GGL +E LQ +F +G I V V+ + T + RGF F
Sbjct: 121 PRDLIGKPEASSTVKKLFVGGLRDDVEEEDLQKYFSTFGPIASVNVVTEKETNKKRGFAF 180
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
+ + + VD + R H + GR ++ K+A+ + ++ K
Sbjct: 181 VEFDDYDPVDKVVLIRDHTVKGRHLDVKKAISKADMDK 218
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 100 KPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
KPEA +K+F+GGL + D+ L+++F Q+G I V ++ + +T RGF F+ +
Sbjct: 37 KPEAE-QFRKLFIGGLDYRTTDESLKKHFEQWGQIVDVVVMKDPKTRKSRGFGFVTYARA 95
Query: 159 DVVDKIVLSKITLLLDRRVE 178
+VD+ ++ + R VE
Sbjct: 96 FMVDEAQAARPHRVDGREVE 115
>gi|242004925|ref|XP_002423326.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
gi|212506345|gb|EEB10588.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
Length = 286
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 103/163 (63%), Positives = 137/163 (84%), Gaps = 1/163 (0%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
++ TEPE LRK+FIGGLDY+TTDE+L++ FE+WGE+VDVVVMKDP TKRSRGFGFITY++
Sbjct: 27 TQITEPEHLRKLFIGGLDYKTTDETLKSHFEKWGEVVDVVVMKDPKTKRSRGFGFITYAK 86
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREY 126
A MVDDA +NRPH +D R VE KRAVPR E G+P+A A++KK+F+GG+KD+ EE+DL+E+
Sbjct: 87 AHMVDDAQANRPHKVDNRTVEPKRAVPRTESGRPDAGASIKKLFIGGIKDEHEEEDLKEH 146
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKI 169
F QFG I S ++V +K++G K+GFAF+E++DYD VDK +
Sbjct: 147 FKQFGNIVSCSIVVDKDSGKKKGFAFVEYDDYDPVDKACCKHL 189
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + S++K+FIGG+ +E L+ F+Q+G IV ++ D + + +GF F
Sbjct: 113 PRTESGRPDAGASIKKLFIGGIKDEHEEEDLKEHFKQFGNIVSCSIVVDKDSGKKKGFAF 172
Query: 63 ITYSEAKMVDDAMSNR 78
+ Y + VD A
Sbjct: 173 VEYDDYDPVDKACCKH 188
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 95 RDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
+ +I +PE ++K+F+GGL + D+ L+ +F ++G + V ++ + +T RGF FI
Sbjct: 26 KTQITEPEH---LRKLFIGGLDYKTTDETLKSHFEKWGEVVDVVVMKDPKTKRSRGFGFI 82
Query: 154 EFNDYDVVDKIVLSKITLLLDRRVE 178
+ +VD ++ + +R VE
Sbjct: 83 TYAKAHMVDDAQANRPHKVDNRTVE 107
>gi|312379326|gb|EFR25637.1| hypothetical protein AND_08860 [Anopheles darlingi]
Length = 357
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 145/176 (82%), Gaps = 1/176 (0%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R DD + EPE LRK+FIGGLDYRTTD++L+A+FE+WG++VDVVVMKDP TKRSRGFGFI
Sbjct: 16 RNDDDEIREPEHLRKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFI 75
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDD 122
TYS++ M+DD +NRPH IDGRVVE KRAVPR +I +PEA ++VKK+FVGGL+D +E+
Sbjct: 76 TYSKSYMIDDTQANRPHKIDGRVVEPKRAVPRQDINRPEAGSSVKKLFVGGLRDDFDEEH 135
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYFS++G + S +VT+K+ G KRGF F+EF+DYD VDKI+L K + ++ ++
Sbjct: 136 LREYFSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQKSHTIQNKLLD 191
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 56/96 (58%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S++K+F+GGL +E L+ +F ++G ++ ++ D + RGFGF
Sbjct: 106 PRQDINRPEAGSSVKKLFVGGLRDDFDEEHLREYFSKYGNVISACIVTDKDNGKKRGFGF 165
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD + + H I ++++ K+A+P+ ++
Sbjct: 166 VEFDDYDPVDKIILQKSHTIQNKLLDVKKALPKQDM 201
>gi|347967733|ref|XP_563821.4| AGAP002374-PA [Anopheles gambiae str. PEST]
gi|333468325|gb|EAL40938.4| AGAP002374-PA [Anopheles gambiae str. PEST]
Length = 362
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 146/176 (82%), Gaps = 1/176 (0%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R DD + EPE LRK+FIGGLDYRTTD++L+A+FE+WG++VDVVVMKDP TKRSRGFGFI
Sbjct: 16 RNDDDEIREPEHLRKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFI 75
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDD 122
TYS++ M+DDA ++RPH IDGRVVE KRAVPR +I +PEA ++VKK+FVGGL+D +E+
Sbjct: 76 TYSKSYMIDDAQASRPHKIDGRVVEPKRAVPRQDINRPEAGSSVKKLFVGGLRDDFDEEH 135
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYFS++G + S +VT+K+ G KRGF F+EF+DYD VDKI+L K + ++ ++
Sbjct: 136 LREYFSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQKSHTIQNKLLD 191
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 56/96 (58%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S++K+F+GGL +E L+ +F ++G ++ ++ D + RGFGF
Sbjct: 106 PRQDINRPEAGSSVKKLFVGGLRDDFDEEHLREYFSKYGNVISACIVTDKDNGKKRGFGF 165
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD + + H I ++++ K+A+P+ ++
Sbjct: 166 VEFDDYDPVDKIILQKSHTIQNKLLDVKKALPKQDM 201
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 134/173 (77%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
D EPE LRK+FIGGL+Y TTD+SL+ F +WGEIVD VVMKDP TK+SRGFGFITY
Sbjct: 3 DESINEPEQLRKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYK 62
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
A MVDDAM +RPH IDGR VE KRAV R+E G P A+ VKK+FVGG+K D ED LR+
Sbjct: 63 RASMVDDAMRSRPHKIDGREVEPKRAVAREESGNPLAHMLVKKIFVGGIKEDTSEDHLRD 122
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YFS++G+IESV+++++K+TG KRGFAF+ F+D+D VDKIV K + D + E
Sbjct: 123 YFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDKIVGLKYHTINDHKSE 175
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 51/83 (61%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GG+ T+++ L+ +F ++G I V V+ D T + RGF F+T+ + VD +
Sbjct: 103 VKKIFVGGIKEDTSEDHLRDYFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDKIV 162
Query: 76 SNRPHNIDGRVVETKRAVPRDEI 98
+ H I+ E K+AVP+ E+
Sbjct: 163 GLKYHTINDHKSEVKKAVPKQEL 185
>gi|170030552|ref|XP_001843152.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167867828|gb|EDS31211.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 371
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 140/173 (80%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
D + EPE LRK+FIGGLDYRTTDE+L+A+FE+WG++VDVVVMKDP TKRSRGFGFITYS
Sbjct: 14 DEEIREPEHLRKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYS 73
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLRE 125
+ MVD+A RPH IDGRVVE KRAVPR +I +PEA A+VKK+FVGGL+D +E+ LR+
Sbjct: 74 KPYMVDEAQQKRPHKIDGRVVEPKRAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRD 133
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF +FG + S +VT KE+G KRGF F+EF+DYD VDKI+L K + ++ ++
Sbjct: 134 YFGKFGNVISACIVTEKESGKKRGFGFVEFDDYDPVDKIILQKSHTIQNKMLD 186
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 57/96 (59%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S++K+F+GGL +E L+ +F ++G ++ ++ + + + RGFGF
Sbjct: 101 PRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDYFGKFGNVISACIVTEKESGKKRGFGF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD + + H I ++++ K+A+P+ E+
Sbjct: 161 VEFDDYDPVDKIILQKSHTIQNKMLDVKKALPKQEM 196
>gi|157126218|ref|XP_001660854.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873325|gb|EAT37550.1| AAEL010467-PB [Aedes aegypti]
Length = 348
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
S+ EPE LRK+FIGGLDYRTTDE+L+A+FE+WG++VDVVVMKDP TKRSRGFGFITYS+
Sbjct: 3 SEIREPEHLRKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSK 62
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREY 126
MVD+A + RPH IDGRVVE KRAVPR +I +PEA A+VKK+FVGGL+D +E+ LR+Y
Sbjct: 63 PYMVDEAQNKRPHKIDGRVVEPKRAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDY 122
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
F FG + S +VT+KE G KRGF F+EF+DYD VDKI+L K + ++ ++
Sbjct: 123 FGAFGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKIILQKSHTIQNKMLD 174
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S++K+F+GGL +E L+ +F +G ++ ++ D + RGFGF
Sbjct: 89 PRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDYFGAFGNVISACIVTDKENGKKRGFGF 148
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD + + H I ++++ K+A+P+ E+
Sbjct: 149 VEFDDYDPVDKIILQKSHTIQNKMLDVKKALPKQEM 184
>gi|157126220|ref|XP_001660855.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873326|gb|EAT37551.1| AAEL010467-PA [Aedes aegypti]
Length = 354
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
S+ EPE LRK+FIGGLDYRTTDE+L+A+FE+WG++VDVVVMKDP TKRSRGFGFITYS+
Sbjct: 3 SEIREPEHLRKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSK 62
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREY 126
MVD+A + RPH IDGRVVE KRAVPR +I +PEA A+VKK+FVGGL+D +E+ LR+Y
Sbjct: 63 PYMVDEAQNKRPHKIDGRVVEPKRAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDY 122
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
F FG + S +VT+KE G KRGF F+EF+DYD VDKI+L K + ++ ++
Sbjct: 123 FGAFGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKIILQKSHTIQNKMLD 174
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S++K+F+GGL +E L+ +F +G ++ ++ D + RGFGF
Sbjct: 89 PRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDYFGAFGNVISACIVTDKENGKKRGFGF 148
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + + VD + + H I ++++ K+A+P+ E+
Sbjct: 149 VEFDDYDPVDKIILQKSHTIQNKMLDVKKALPKQEM 184
>gi|348521586|ref|XP_003448307.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oreochromis niloticus]
Length = 332
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP +KRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF QF
Sbjct: 69 DAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQF 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++++T++ TG KRGFAF+ F+D+D VD+IV+ K + E
Sbjct: 129 GKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCE 176
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +F+Q+G+I + +M D T + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+ E ++A+ + E+
Sbjct: 163 VIQKYHTINSHNCEVRKALTKQEM 186
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 89 TKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAK 147
++ +VPR+ PE ++K+F+GGL + D+ LR +F Q+GT+ ++ + +
Sbjct: 2 SRESVPRE----PEQ---LRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRS 54
Query: 148 RGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
RGF F+ ++ VD + ++ + R VE
Sbjct: 55 RGFGFVTYSSVQEVDAAMSARPHKVDGRVVE 85
>gi|432865306|ref|XP_004070518.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oryzias latipes]
Length = 329
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP +KRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF QF
Sbjct: 68 DAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQF 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++++T++ TG KRGFAF+ F+D+D VD+IV+ K + E
Sbjct: 128 GKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCE 175
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + L+ +F+Q+G+I + +M D T + RGF F+
Sbjct: 91 REDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+ E ++A+ + E+
Sbjct: 151 TFDDHDSVDRIVIQKYHTINSHNCEVRKALTKQEM 185
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQ 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMSARPHKVDGRVVE 84
>gi|154183823|gb|ABS70764.1| Hnrp1 [Haplochromis burtoni]
Length = 289
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP +KRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF QF
Sbjct: 69 DAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQF 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++++T++ TG KRGFAF+ F+D+D VD+IV+ K + E
Sbjct: 129 GKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCE 176
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + L+ +F+Q+G+I + +M D T + RGF F+
Sbjct: 92 REDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+ E ++A+ + E+
Sbjct: 152 TFDDHDSVDRIVIQKYHTINSHNCEVRKALTKQEM 186
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 89 TKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAK 147
++ +VPR+ PE ++K+F+GGL + D+ LR +F Q+GT+ ++ + +
Sbjct: 2 SRESVPRE----PEQ---LRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRS 54
Query: 148 RGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
RGF F+ ++ VD + ++ + R VE
Sbjct: 55 RGFGFVTYSSVQEVDAAMSARPHKVDGRVVE 85
>gi|41053816|ref|NP_956789.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|33416839|gb|AAH55499.1| Zgc:66127 [Danio rerio]
Length = 388
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 123/158 (77%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP TKRSRGFGF+TYS V
Sbjct: 10 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEV 69
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGR VE KRAV R++ KP A++TVKKMFVGG+K D +E+ LREYF QF
Sbjct: 70 DAAMDARPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQF 129
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+ VN++T K + +RGFAFI F+D+D VD+IV+ K
Sbjct: 130 GKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQK 167
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 60/102 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D SK +++K+F+GG+ T +E L+ +F Q+G+I +V +M + + + RGF FI
Sbjct: 93 REDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEKNSDKRRGFAFI 152
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANA 105
T+ + VD + + H ++G E ++A+ R+ + + N+
Sbjct: 153 TFDDHDAVDRIVIQKYHTVNGHNCEVRKALSREGMNRVSMNS 194
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++
Sbjct: 8 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVG 67
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 68 EVDAAMDARPHKVDGRAVE 86
>gi|148233568|ref|NP_001079471.1| heterogeneous nuclear ribonucleoprotein A2 homolog 2 [Xenopus
laevis]
gi|1710624|sp|P51990.1|RO22_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 2;
AltName: Full=hnRNP A2(B)
gi|214743|gb|AAB59951.1| ribonucleoprotein [Xenopus laevis]
gi|27694622|gb|AAH43750.1| MGC52881 protein [Xenopus laevis]
Length = 358
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ F+EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH IDGRVVE KRAV R+E KP A+ TVKK+FVGG+K D EE LREYF ++
Sbjct: 64 DAAMSARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IES ++T+K++G KRGF F+ FND+D VDKIVL K + E
Sbjct: 124 GKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAE 171
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R + +K +++K+F+GG+ T + L+ +FE++G+I ++ D + + RGFGF+
Sbjct: 87 REESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+++ VD + + H I+G E ++A+ + E+
Sbjct: 147 TFNDHDPVDKIVLQKYHTINGHNAEVRKALSKQEM 181
>gi|76780030|gb|AAI06633.1| MGC52881 protein [Xenopus laevis]
Length = 346
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ F+EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH IDGRVVE KRAV R+E KP A+ TVKK+FVGG+K D EE LREYF ++
Sbjct: 64 DAAMSARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IES ++T+K++G KRGF F+ FND+D VDKIVL K + E
Sbjct: 124 GKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAE 171
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R + +K +++K+F+GG+ T + L+ +FE++G+I ++ D + + RGFGF+
Sbjct: 87 REESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+++ VD + + H I+G E ++A+ + E+
Sbjct: 147 TFNDHDPVDKIVLQKYHTINGHNAEVRKALSKQEM 181
>gi|58331869|ref|NP_001011094.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
gi|54038494|gb|AAH84487.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K EPE LRK+FIGGL + TTDESL+ FEQWG + D VVM+DP +KRSRGFGF+TYS
Sbjct: 3 KSEEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSST 62
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AMS RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LREYF
Sbjct: 63 DEVDAAMSARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHHLREYF 122
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
Q+G IE + ++T++ +G KRGFAF+ F D+D VDKIV+ K + + E
Sbjct: 123 EQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNCE 173
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D S+ +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 89 REDSSRPGAHLTVKKIFVGGIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFV 148
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++ E ++A+ + E+
Sbjct: 149 TFEDHDSVDKIVIQKYHTVNNHNCEVRKALSKQEM 183
>gi|327274637|ref|XP_003222083.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Anolis carolinensis]
Length = 349
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 134/178 (75%), Gaps = 2/178 (1%)
Query: 3 PRYD-DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D +S E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFG
Sbjct: 2 PRGDRESDWREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFG 61
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEE 120
F+T+S VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE
Sbjct: 62 FVTFSSMAEVDSAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEE 121
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LR+YFS++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 122 HHLRDYFSEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 179
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +F ++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 106 TVKKLFVGGIKEDTEEHHLRDYFSEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 166 VLQKYHTINGHNAEVRKALSRQEM 189
>gi|326936051|ref|XP_003214072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like, partial
[Meleagris gallopavo]
Length = 176
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 98/161 (60%), Positives = 126/161 (78%), Gaps = 1/161 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 16 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 76 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ TL
Sbjct: 136 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQNTTL 176
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 14 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVE 73
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 74 EVDAAMNARPHKVDGRVVE 92
>gi|395540406|ref|XP_003772146.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Sarcophilus harrisii]
Length = 385
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 131/175 (74%), Gaps = 1/175 (0%)
Query: 5 YDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
Y D + E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T
Sbjct: 22 YLDGQRREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVT 81
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
+S VD AMS RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE L
Sbjct: 82 FSSMAEVDAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHL 141
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 142 RDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNTE 196
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 123 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 182
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 183 VLQKYHTINGHNTEVRKALSRQEM 206
>gi|148237229|ref|NP_001080689.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus laevis]
gi|28374304|gb|AAH45260.1| Hnrpa1 protein [Xenopus laevis]
Length = 399
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+ FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLREHFEQWGALTDCVVMRDPNSKRSRGFGFVTYSSTDEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LREYF Q+
Sbjct: 69 DAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHHLREYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F D+D VDKIV+ K + + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNCE 176
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D S+ +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSSRPGAHLTVKKIFVGGIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++ E ++A+ + E+
Sbjct: 152 TFEDHDSVDKIVIQKYHTVNNHNCEVRKALSKQEM 186
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LRE+F Q+G + ++ + + RGF F+ ++ D
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLREHFEQWGALTDCVVMRDPNSKRSRGFGFVTYSSTD 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMTARPHKVDGRVVE 85
>gi|71895177|ref|NP_001026424.1| heterogeneous nuclear ribonucleoprotein A1 [Gallus gallus]
gi|53130302|emb|CAG31480.1| hypothetical protein RCJMB04_6o1 [Gallus gallus]
Length = 368
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 56/101 (55%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +F Q+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
T+ + VD + + H ++G E ++A+ + E+ A+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASAS 192
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|449492608|ref|XP_002192177.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Taeniopygia guttata]
Length = 309
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 133/178 (74%), Gaps = 2/178 (1%)
Query: 3 PRYD-DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D +S E E RK+FIGGL + TT+ESL++++EQWG++ D VVM+DP +KRSRGFG
Sbjct: 2 PRGDRESDWREKEQFRKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFG 61
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEE 120
F+T+S VD AM+ RPH IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE
Sbjct: 62 FVTFSSMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEE 121
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LR+YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 122 HHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 179
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 106 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 166 VLQKYHTINGHNAEVRKALSRQEM 189
>gi|431921599|gb|ELK18951.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Pteropus alecto]
Length = 298
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 126/162 (77%), Gaps = 1/162 (0%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
S EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+
Sbjct: 14 SSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 73
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREY 126
+ VD AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+Y
Sbjct: 74 VEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDY 133
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
F Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 134 FEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 175
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 101 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 160
Query: 64 TYSEAKMVDDAMSNRPHNIDGR 85
T+ + VD + + H ++G
Sbjct: 161 TFDDHDSVDKIVIQKYHTVNGH 182
>gi|223647288|gb|ACN10402.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|223673171|gb|ACN12767.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 384
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP KRSRGFGF+TY+ V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPANKRSRGFGFVTYAGVNEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGR+VE KRAV R++ +P A+ TVKK+FVGG+K D E+ LR+YF QF
Sbjct: 68 DAAMEARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFEQF 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++++T++ +G KRGFAF+ F+D+D VD+IV+ K L E
Sbjct: 128 GKIEVIDIMTDRNSGKKRGFAFVTFDDHDAVDRIVIQKYHTLNGHNCE 175
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D S+ +++K+F+GG+ T D L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 91 REDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFEQFGKIEVIDIMTDRNSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ R E+
Sbjct: 151 TFDDHDAVDRIVIQKYHTLNGHNCEVRKALSRQEM 185
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LR +F Q+G++ ++ + RGF F+ + +
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPANKRSRGFGFVTYAGVN 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMEARPHKVDGRLVE 84
>gi|39654464|pdb|1PGZ|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(6-Mi)
G); A Human Telomeric Repeat Containing 6-Methyl-8-(2-
Deoxy-Beta-Ribofuranosyl)isoxanthopteridine (6-Mi)
Length = 195
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 68 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 128 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 165
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 162 VIQKYHTVNGHNCEVRKALSKQEMASASSS 191
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMNARPHKVDGRVVE 84
>gi|390464603|ref|XP_003733247.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Callithrix jacchus]
Length = 288
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPSAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 56/96 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPSAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>gi|328724063|ref|XP_001946404.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 290
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/159 (62%), Positives = 124/159 (77%), Gaps = 1/159 (0%)
Query: 10 CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
+EPE RK+FIGGLD+ TTD+SL+AFFEQWG+IVD VV+KDP +KRSR FGFITYS++
Sbjct: 3 SSEPEKYRKLFIGGLDFTTTDDSLKAFFEQWGKIVDYVVIKDPKSKRSRRFGFITYSQSS 62
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQ 129
MVD AMSNRPH IDGR VETKRAVP DEI K + + ++FV G+K+Q E+DL EYF +
Sbjct: 63 MVDQAMSNRPHQIDGREVETKRAVPPDEIKKSDTTVSANRIFVTGIKNQSENDLLEYFGK 122
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
FG I + +VT+K G +RGF FIE++D D VDK +L K
Sbjct: 123 FGNITKITIVTDK-GGQRRGFGFIEYDDTDSVDKAILVK 160
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S ++F+ G+ ++ ++ L+ +F ++G I + ++ D +R RGFGFI Y + VD A
Sbjct: 99 SANRIFVTGIKNQSENDLLE-YFGKFGNITKITIVTDKGGQR-RGFGFIEYDDTDSVDKA 156
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIG 99
+ + H +DG ++ ++++ R + G
Sbjct: 157 ILVKSHQVDGEKLDVEKSISRSDGG 181
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+F+GGL DD L+ +F Q+G I ++ + ++ R F FI ++ +VD+ +
Sbjct: 10 RKLFIGGLDFTTTDDSLKAFFEQWGKIVDYVVIKDPKSKRSRRFGFITYSQSSMVDQAMS 69
Query: 167 SKITLLLDRRVE 178
++ + R VE
Sbjct: 70 NRPHQIDGREVE 81
>gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
gi|55670114|pdb|1U1K|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt 7da
Ggg); A Human Telomeric Repeat Containing
7-Deaza-Adenine
gi|55670116|pdb|1U1L|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt Prn
Ggg); A Human Telomeric Repeat Containing Nebularine
gi|55670118|pdb|1U1M|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 7gu
Gg); A Human Telomeric Repeat Containing 7-Deaza-Guanine
gi|55670120|pdb|1U1N|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta (Prn)
Gg); A Human Telomeric Repeat Containing Nebularine
gi|55670122|pdb|1U1O|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggttag(Di)g); A Human Telomeric Repeat Containing
Inosine
gi|55670124|pdb|1U1P|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 2pr
Gg); A Human Telomeric Repeat Containing 2-Aminopurine
gi|55670126|pdb|1U1Q|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggtta(Di)gg); A Human Telomeric Repeat Containing
Inosine
gi|55670128|pdb|1U1R|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(2pr)
G); A Human Telomeric Repeat Containing 2-Aminopurine
Length = 196
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|148227778|ref|NP_001080390.1| heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Xenopus
laevis]
gi|28302301|gb|AAH46692.1| Hnrpa2b1 protein [Xenopus laevis]
Length = 346
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG + D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH IDGRVVE KRAV R+E KP A+ TVKK+FVGG+K D EE LREYF ++
Sbjct: 64 DAAMATRPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+S+ ++T+K++G KRGFAF+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R + +K +++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGF F+
Sbjct: 87 REESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E ++A+ + E+
Sbjct: 147 TFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEM 181
>gi|387016398|gb|AFJ50318.1| HNRPA1 protein [Crotalus adamanteus]
Length = 212
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/158 (61%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 81
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 82 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 141
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 142 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 179
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 116 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 175
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 176 VIQKYHTVNGHNCEVRKALSKQEMASASSS 205
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 20 PKEPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 79
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 80 EVDAAMNARPHKVDGRVVE 98
>gi|75074832|sp|Q9TTV2.1|ROA2_SAGOE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1; AltName: Full=Vitamin D response
element-binding protein 2; Short=VDRE-BP 2
gi|6273351|gb|AAF06330.1|AF192348_1 vitamin D response element binding protein [Saguinus oedipus]
Length = 341
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 130/168 (77%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL ++TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF+++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +F ++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|1710623|sp|P51989.1|RO21_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 1;
AltName: Full=hnRNP A2(A)
gi|214741|gb|AAA49948.1| ribonucleoprotein [Xenopus laevis]
Length = 346
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG + D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH IDGRVVE KRAV R+E KP A+ TVKK+FVGG+K D EE LREYF ++
Sbjct: 64 DAAMATRPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+S+ ++T+K++G KRGFAF+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R + +K +++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGF F+
Sbjct: 87 REESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E ++A+ + E+
Sbjct: 147 TFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEM 181
>gi|348519655|ref|XP_003447345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oreochromis niloticus]
Length = 335
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D EPE LRK+FIGGL + TT+ESL+A FEQWG + D VVM+DP +KRSRGFGF+TY
Sbjct: 2 EDRGAKEPEQLRKLFIGGLSFETTEESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTY 61
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLR 124
S + VDDAM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +R
Sbjct: 62 SSVREVDDAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIR 121
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
EYF ++G IE ++++ + TG KRGF F+ F+D+D VDKIV K +
Sbjct: 122 EYFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKFHTI 169
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K +++K+F+GG+ T + ++ +FE++G+I + +M++ T + RGF F+
Sbjct: 91 REDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFEKYGKIECIDIMEERSTGKKRGFCFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD ++ + H I+ E ++A+ + E+
Sbjct: 151 TFDDHDTVDKIVAQKFHTINFHNCEVRKALSKQEM 185
>gi|348564390|ref|XP_003467988.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cavia porcellus]
Length = 383
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 130/173 (75%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 41 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 100
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 101 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 160
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 161 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 213
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 140 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 199
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 200 VLQKYHTINGHNAEVRKALSRQEM 223
>gi|147900728|ref|NP_001081282.1| heterogeneous nuclear ribonucleoproteins A1 homolog [Xenopus
laevis]
gi|47938744|gb|AAH72090.1| LOC397751 protein [Xenopus laevis]
Length = 365
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
EPE LRK+FIGGL + TTDESL+ FEQWG + D VVM+DP +KRSRGFGF+TY
Sbjct: 8 NEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VD AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EED LREYF Q
Sbjct: 68 VDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQ 127
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+G IE + ++T++ +G KRGFAF+ F D+D VDKIV+ K + + E
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNCE 176
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D S+ +++K+F+GG+ T ++ L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++ E ++A+ + E+
Sbjct: 152 TFEDHDSVDKIVIQKYHTVNNHNCEVRKALSKQEM 186
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LRE+F Q+GT+ ++ + + RGF F+ + D
Sbjct: 7 PNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTD 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMTARPHKVDGRVVE 85
>gi|433286562|pdb|2LYV|A Chain A, Solution Structure Of The Two Rrm Domains Of Hnrnp A1
(up1) Using Segmental Isotope Labeling
Length = 197
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 10 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 69
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 70 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 129
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 130 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 167
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 57/101 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 93 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 152
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
T+ + VD + + H ++G E ++A+ + E+ ++
Sbjct: 153 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSS 193
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 8 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 67
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 68 EVDAAMNARPHKVDGRVVE 86
>gi|71896753|ref|NP_001026156.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Gallus gallus]
gi|53127438|emb|CAG31102.1| hypothetical protein RCJMB04_2g17 [Gallus gallus]
Length = 349
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 132/178 (74%), Gaps = 2/178 (1%)
Query: 3 PRYD-DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D +S E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFG
Sbjct: 2 PRGDRESDWREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFG 61
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEE 120
F+T+S VD AM+ RPH IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE
Sbjct: 62 FVTFSSMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEE 121
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LR+YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 122 HHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 179
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 106 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 166 VLQKYHTINGHNAEVRKALSRQEM 189
>gi|5542530|pdb|2UP1|A Chain A, Structure Of Up1-Telomeric Dna Complex
gi|39654500|pdb|1PO6|A Chain A, Crystal Structure Of Up1 Complexed With
D(Tagg(6mi)ttaggg): A Human Telomeric Repeat Containing
6-Methyl-8-(2-Deoxy-
Beta-Ribofuranosyl)isoxanthopteridine (6mi)
Length = 183
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 2 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 62 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 122 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 159
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 85 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 145 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 180
>gi|198450380|ref|XP_001357960.2| GA19533, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131011|gb|EAL27096.2| GA19533, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 468
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/166 (62%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R DD C E E LRK+FIGGL TT+E L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 27 REDDDIC-ELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDAATKRSRGFGFI 85
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +ED
Sbjct: 86 TYTKSAMVDKAQENRPHIIDGKTVEAKRALPRPERETRETNISVKKLFVGGLKDNHDEDC 145
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD VDK +L K
Sbjct: 146 LREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQK 191
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL ++ L+ +F Q+G +V V ++ D T + RGF FI + + VD A
Sbjct: 128 SVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKA 187
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H+I V+ K+++
Sbjct: 188 ILQKQHSIKYVHVDVKKSI 206
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL E+ L+ ++ Q+G + V ++ + T RGF FI + +VDK
Sbjct: 38 LRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVDKAQ 97
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 98 ENRPHIIDGKTVE 110
>gi|344255674|gb|EGW11778.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Cricetulus griseus]
Length = 340
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>gi|148666221|gb|EDK98637.1| mCG119114, isoform CRA_a [Mus musculus]
Length = 357
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 60 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 119
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 120 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 179
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 180 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 227
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 154 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 213
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 214 VLQKYHTINGHNAEVRKALSRQEM 237
>gi|334349111|ref|XP_001368260.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Monodelphis domestica]
Length = 341
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|149634029|ref|XP_001510026.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Ornithorhynchus anatinus]
gi|345323587|ref|XP_003430725.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 344
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|390177202|ref|XP_003736301.1| GA19533, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858945|gb|EIM52374.1| GA19533, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 462
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/166 (62%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R DD C E E LRK+FIGGL TT+E L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 27 REDDDIC-ELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDAATKRSRGFGFI 85
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +ED
Sbjct: 86 TYTKSAMVDKAQENRPHIIDGKTVEAKRALPRPERETRETNISVKKLFVGGLKDNHDEDC 145
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD VDK +L K
Sbjct: 146 LREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQK 191
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL ++ L+ +F Q+G +V V ++ D T + RGF FI + + VD A
Sbjct: 128 SVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKA 187
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H+I V+ K+++
Sbjct: 188 ILQKQHSIKYVHVDVKKSI 206
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL E+ L+ ++ Q+G + V ++ + T RGF FI + +VDK
Sbjct: 38 LRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVDKAQ 97
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 98 ENRPHIIDGKTVE 110
>gi|195109789|ref|XP_001999464.1| GI24524 [Drosophila mojavensis]
gi|193916058|gb|EDW14925.1| GI24524 [Drosophila mojavensis]
Length = 462
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
D+ E E LRK+FIGGL TT+ESL+ F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 26 DEDDICELEHLRKLFIGGLAPYTTEESLKVFYSQWGKVVDVVVMRDAATKRSRGFGFITY 85
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLR 124
+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +ED LR
Sbjct: 86 TKSAMVDTAQENRPHIIDGKTVEAKRALPRPERETRETNISVKKLFVGGLKDNHDEDCLR 145
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
EYF QFG + SV ++T+K TG +RGFAFIEF+DYD VDK +L +
Sbjct: 146 EYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQR 189
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL ++ L+ +F Q+G +V V ++ D T + RGF FI + + VD A
Sbjct: 126 SVKKLFVGGLKDNHDEDCLREYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKA 185
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ R H+I +V+ K+++
Sbjct: 186 ILQRQHSIKYVLVDVKKSI 204
>gi|345323589|ref|XP_003430726.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 302
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|157831273|pdb|1HA1|A Chain A, Hnrnp A1 (Rbd1,2) From Homo Sapiens
Length = 184
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPR 95
+ + H ++G E ++A+ +
Sbjct: 163 VIQKYHTVNGHNCEVRKALSK 183
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|417409751|gb|JAA51367.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 328
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 31 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 90
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 91 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 150
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 151 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 198
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 125 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 184
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 185 VLQKYHTINGHNAEVRKALSRQEM 208
>gi|344266093|ref|XP_003405115.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Loxodonta africana]
Length = 370
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|444513904|gb|ELV10489.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Tupaia
chinensis]
Length = 432
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 4 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 64 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 124 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 171
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 52/85 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 98 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIG 99
+ + H ++G E ++A+ + E+
Sbjct: 158 VIQKYHTVNGHNCEVRKALSKQEMA 182
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 2 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 61
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 62 EVDAAMNARPHKVDGRVVE 80
>gi|344266091|ref|XP_003405114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Loxodonta africana]
Length = 320
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|157834095|pdb|1UP1|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
Length = 182
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 7 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 67 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 126
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 127 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 164
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 101 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 160
Query: 75 MSNRPHNIDGRVVETKRAVPR 95
+ + H ++G E ++A+ +
Sbjct: 161 VIQKYHTVNGHNCEVRKALSK 181
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 5 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 64
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 65 EVDAAMNARPHKVDGRVVE 83
>gi|1711240|dbj|BAA13161.1| TIS [Mus musculus]
gi|119617170|gb|EAW96764.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_d [Homo
sapiens]
Length = 268
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|417410136|gb|JAA51545.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 368
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 31 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 90
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 91 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 150
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 151 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 198
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 125 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 184
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 185 VLQKYHTINGHNAEVRKALSRQEM 208
>gi|31455238|gb|AAH00506.3| HNRNPA2B1 protein [Homo sapiens]
Length = 249
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD +
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 167 SKITLLLDRRVE 178
++ + R VE
Sbjct: 69 ARPHSIDGRVVE 80
>gi|158259881|dbj|BAF82118.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 13 KKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM 72
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 73 AEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 132
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 183
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQEM 193
>gi|449268325|gb|EMC79194.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Columba
livia]
Length = 339
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL++++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 2 EKEQFRKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 62 DAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 122 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 169
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 96 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 155
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 156 VLQKYHTINGHNAEVRKALSRQEM 179
>gi|47939618|gb|AAH71945.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF QF
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQF 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 313
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|291394569|ref|XP_002713772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
gi|291397610|ref|XP_002715276.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
Length = 352
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 130/173 (75%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 183
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQEM 193
>gi|14043072|ref|NP_112533.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Homo
sapiens]
gi|388452958|ref|NP_001252700.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Macaca mulatta]
gi|73976084|ref|XP_532495.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Canis lupus familiaris]
gi|194209740|ref|XP_001498416.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Equus caballus]
gi|296209404|ref|XP_002751505.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Callithrix jacchus]
gi|301754131|ref|XP_002912905.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ailuropoda melanoleuca]
gi|332242622|ref|XP_003270484.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Nomascus leucogenys]
gi|332864911|ref|XP_519003.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan troglodytes]
gi|335305558|ref|XP_003134901.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Sus scrofa]
gi|395830927|ref|XP_003788564.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Otolemur
garnettii]
gi|397472890|ref|XP_003807965.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan paniscus]
gi|402863877|ref|XP_003896220.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Papio anubis]
gi|403287971|ref|XP_003935192.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410952508|ref|XP_003982921.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Felis catus]
gi|426227786|ref|XP_004007996.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Ovis
aries]
gi|426355699|ref|XP_004045247.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Gorilla gorilla gorilla]
gi|133257|sp|P22626.2|ROA2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337453|gb|AAA60271.1| hnRNP B1 protein [Homo sapiens]
gi|565643|dbj|BAA06031.1| hnRNP B1 protein [Homo sapiens]
gi|119614243|gb|EAW93837.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|119614245|gb|EAW93839.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|387542844|gb|AFJ72049.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Macaca
mulatta]
gi|410225454|gb|JAA09946.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343563|gb|JAA40595.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
Length = 353
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 13 KKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM 72
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 73 AEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 132
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 183
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQEM 193
>gi|124028629|sp|O88569.2|ROA2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|23266713|gb|AAN16352.1|AF452567_1 heterogeneous nuclear ribonucleoprotein A2/B1/B0 [Mus musculus]
Length = 353
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 13 KKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM 72
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 73 AEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 132
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 183
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQEM 193
>gi|195450939|ref|XP_002072698.1| GK13742 [Drosophila willistoni]
gi|194168783|gb|EDW83684.1| GK13742 [Drosophila willistoni]
Length = 506
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/166 (62%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R DD C E E LRK+FIGGL TT+E L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 27 REDDDIC-ELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDATTKRSRGFGFI 85
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +E+
Sbjct: 86 TYTKSTMVDKAQENRPHVIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEEC 145
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD VDK +L K
Sbjct: 146 LREYFVQFGHVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQK 191
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL +E L+ +F Q+G +V V ++ D T + RGF FI + + VD A
Sbjct: 128 SVKKLFVGGLKDNHDEECLREYFVQFGHVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKA 187
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H+I +V+ K+++
Sbjct: 188 ILQKQHSIKYVLVDVKKSI 206
>gi|291394515|ref|XP_002713754.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 56/100 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEA 103
T+ + VD + + H ++G E ++A+ + E+ +
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASS 191
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|90083957|dbj|BAE90929.1| unnamed protein product [Macaca fascicularis]
Length = 317
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 130/173 (75%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 183
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQEM 193
>gi|351704285|gb|EHB07204.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial
[Heterocephalus glaber]
gi|355560744|gb|EHH17430.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
mulatta]
gi|355747762|gb|EHH52259.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
fascicularis]
Length = 352
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 12 KKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM 71
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 72 AEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 131
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 132 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 182
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 109 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 168
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 169 VLQKYHTINGHNAEVRKALSRQEM 192
>gi|94482834|gb|ABF22450.1| heterogeneous nuclear ribonucleoprotein A1 [Takifugu rubripes]
Length = 255
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVDEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE +R+YF +F
Sbjct: 68 DLAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERF 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++++T++ +G KRGFAF+ F+D+D VD+IV+ K + E
Sbjct: 128 GKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRIVIQKYHTINSHNCE 175
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + ++ +FE++G+I + ++ D + + RGF F+
Sbjct: 91 REDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIITDRNSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+ E ++A+ R E+
Sbjct: 151 TFDDHDPVDRIVIQKYHTINSHNCEVRKALTRQEM 185
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 62 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 121
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 122 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 181
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 182 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 229
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 145 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 204
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 205 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 239
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 60 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 119
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 120 EVDAAMNARPHKVDGRVVE 138
>gi|354472764|ref|XP_003498607.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cricetulus griseus]
Length = 357
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 130/173 (75%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 15 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 74
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 75 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 134
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 135 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 187
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 114 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 173
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 174 VLQKYHTINGHNAEVRKALSRQEM 197
>gi|133258|sp|P17130.1|ROA1_XENLA RecName: Full=Heterogeneous nuclear ribonucleoproteins A1 homolog;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|214239|gb|AAA49741.1| ribonucleoprotein A1a [Xenopus laevis]
Length = 365
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/159 (61%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
EPE LRK+FIGGL + TTDESL+ FEQWG + D VVM+DP +KRSRGFGF+TY
Sbjct: 8 NEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VD AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EED LREYF Q
Sbjct: 68 VDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQ 127
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+G IE + ++T++ +G KRGFAF+ F D+D VDKIV+ K
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQK 166
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D S+ +++K+F+GG+ T ++ L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++ + ++A+ + E+
Sbjct: 152 TFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQEM 186
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LRE+F Q+GT+ ++ + + RGF F+ + D
Sbjct: 7 PNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTD 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMTARPHKVDGRVVE 85
>gi|344270293|ref|XP_003406980.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Loxodonta africana]
Length = 365
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 130/173 (75%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 23 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 82
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 83 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 142
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 143 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 195
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 122 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 181
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 182 VLQKYHTINGHNAEVRKALSRQEM 205
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTI 133
M+++P + +ET VP + K +K+F+GGL + E+ LR Y+ Q+G +
Sbjct: 5 MNDKPKVQSKKTLET---VPLER--KKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKL 59
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ + + RGF F+ F+ VD + ++ + R VE
Sbjct: 60 TDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVE 104
>gi|219519440|gb|AAI45589.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DGAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|75517570|gb|AAI03708.1| HNRPA1 protein [Homo sapiens]
Length = 267
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|432933127|ref|XP_004081818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oryzias latipes]
Length = 340
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/162 (59%), Positives = 123/162 (75%), Gaps = 1/162 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TT+ESL+A FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 8 EPEQLRKLFIGGLSFETTEESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVTYSNVTEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
DDAM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +REYF ++
Sbjct: 68 DDAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
G IE ++++ + TG KRGF F+ F+D+D VDKIV K ++
Sbjct: 128 GKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHII 169
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 59/101 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K +++K+F+GG+ T + ++ +FE++G+I + +M++ T + RGF F+
Sbjct: 91 REDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFEKYGKIECIDIMEERSTGKKRGFCFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
T+ + VD ++ + H I+ E ++A+ + E+ +N
Sbjct: 151 TFDDHDTVDKIVAQKYHIINFHNCEVRKALSKQEMNTISSN 191
>gi|214241|gb|AAA49742.1| ribonucleoprotein A1b [Xenopus laevis]
Length = 351
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/159 (61%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
EPE LRK+FIGGL + TTDESL+ FEQWG + D VVM+DP +KRSRGFGF+TY
Sbjct: 8 NEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VD AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EED LREYF Q
Sbjct: 68 VDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQ 127
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+G IE + ++T++ +G KRGFAF+ F D+D VDKIV+ K
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQK 166
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D S+ +++K+F+GG+ T ++ L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++ + ++A+ + E+
Sbjct: 152 TFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQEM 186
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LRE+F Q+GT+ ++ + + RGF F+ + D
Sbjct: 7 PNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTD 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMTARPHKVDGRVVE 85
>gi|296196619|ref|XP_002745917.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Callithrix jacchus]
Length = 341
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|197101465|ref|NP_001127331.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pongo abelii]
gi|75070806|sp|Q5RBU8.1|ROA2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|55728019|emb|CAH90762.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/161 (58%), Positives = 127/161 (78%), Gaps = 1/161 (0%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 13 KKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM 72
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 73 AEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF 132
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 170 VLQKHHTINGHNAEVRKALSRQEM 193
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD +
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 167 SKITLLLDRRVE 178
++ + R VE
Sbjct: 81 ARPHSIDGRVVE 92
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|148671985|gb|EDL03932.1| mCG15678, isoform CRA_c [Mus musculus]
Length = 335
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 24 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 83
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 84 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 143
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 144 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 191
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 107 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 166
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 167 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 201
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 22 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 81
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 82 EVDAAMNARPHKVDGRVVE 100
>gi|440899276|gb|ELR50605.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 339
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 2 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 62 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 122 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 169
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 96 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 155
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 156 VLQKYHTINGHNAEVRKALSRQEM 179
>gi|74204146|dbj|BAE39838.1| unnamed protein product [Mus musculus]
Length = 320
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|291394513|ref|XP_002713753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|4504447|ref|NP_002128.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Homo
sapiens]
gi|114051756|ref|NP_001039440.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|73976082|ref|XP_863847.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 3
[Canis lupus familiaris]
gi|332242620|ref|XP_003270483.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Nomascus leucogenys]
gi|332864909|ref|XP_003318407.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan troglodytes]
gi|338724111|ref|XP_003364873.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Equus caballus]
gi|350595419|ref|XP_003484106.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Sus scrofa]
gi|390466619|ref|XP_003733620.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Callithrix jacchus]
gi|397472888|ref|XP_003807964.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan paniscus]
gi|402863875|ref|XP_003896219.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Papio anubis]
gi|403287969|ref|XP_003935191.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410952506|ref|XP_003982920.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Felis catus]
gi|426355697|ref|XP_004045246.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Gorilla gorilla gorilla]
gi|122145945|sp|Q2HJ60.1|ROA2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337449|gb|AAA36574.1| hnRNP A2 protein [Homo sapiens]
gi|500638|gb|AAB60650.1| hnRNP protein A2 [Homo sapiens]
gi|565644|dbj|BAA06032.1| hnRNP A2 protein [Homo sapiens]
gi|87578315|gb|AAI13299.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Bos taurus]
gi|119614241|gb|EAW93835.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|119614242|gb|EAW93836.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|149033380|gb|EDL88181.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|149033381|gb|EDL88182.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|296488431|tpg|DAA30544.1| TPA: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|387542842|gb|AFJ72048.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Macaca
mulatta]
gi|410225452|gb|JAA09945.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343561|gb|JAA40594.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343565|gb|JAA40596.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343567|gb|JAA40597.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343569|gb|JAA40598.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|456753293|gb|JAA74140.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Sus scrofa]
Length = 341
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|109134362|ref|NP_058086.2| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1 [Mus
musculus]
gi|309267107|ref|XP_001473875.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Mus musculus]
gi|21071091|gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
gi|148666222|gb|EDK98638.1| mCG119114, isoform CRA_b [Mus musculus]
gi|148666223|gb|EDK98639.1| mCG119114, isoform CRA_b [Mus musculus]
Length = 341
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|148671983|gb|EDL03930.1| mCG15678, isoform CRA_a [Mus musculus]
Length = 371
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 7 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 67 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 126
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 127 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 174
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 90 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 149
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 150 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 184
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Ovis aries]
Length = 319
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|395540858|ref|XP_003772367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Sarcophilus
harrisii]
Length = 372
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|148671986|gb|EDL03933.1| mCG15678, isoform CRA_d [Mus musculus]
Length = 326
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 15 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 75 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 134
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 135 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 182
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 98 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 157
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 158 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 192
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 13 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 72
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 73 EVDAAMNARPHKVDGRVVE 91
>gi|90075098|dbj|BAE87229.1| unnamed protein product [Macaca fascicularis]
Length = 304
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|410899428|ref|XP_003963199.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Takifugu rubripes]
Length = 291
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVDEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE +R+YF +F
Sbjct: 68 DLAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERF 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++++T++ +G KRGFAF+ F+D+D VD+IV+ K + E
Sbjct: 128 GKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRIVIQKYHTINSHNCE 175
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + ++ +FE++G+I + ++ D + + RGF F+
Sbjct: 91 REDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIITDRNSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDL 123
T+ + VD + + H I+ E ++A+ R E+ + + M G + D
Sbjct: 151 TFDDHDPVDRIVIQKYHTINSHNCEVRKALTRQEM---QTSGAGTGMRGGSRSNGRPYDY 207
Query: 124 REYFSQFG 131
FSQ G
Sbjct: 208 DRGFSQGG 215
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++ D
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVD 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDLAMTARPHKVDGRVVE 84
>gi|291389294|ref|XP_002711081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Oryctolagus
cuniculus]
Length = 371
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|190360152|sp|P0C7M2.1|RA1L3_HUMAN RecName: Full=Putative heterogeneous nuclear ribonucleoprotein
A1-like 3; Short=hnRNP A1-like 3; AltName: Full=hnRNP
core protein A1-like 3
gi|119621694|gb|EAX01289.1| hCG2020860, isoform CRA_b [Homo sapiens]
gi|119621695|gb|EAX01290.1| hCG2020860, isoform CRA_b [Homo sapiens]
Length = 320
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|32880197|ref|NP_872591.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2 [Mus
musculus]
gi|26354140|dbj|BAC40700.1| unnamed protein product [Mus musculus]
gi|223461557|gb|AAI41254.1| Hnrnpa2b1 protein [Mus musculus]
Length = 301
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|402908388|ref|XP_003916925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Papio anubis]
gi|402908390|ref|XP_003916926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Papio anubis]
Length = 351
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|3329498|gb|AAC26867.1| heterogenous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus]
Length = 313
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|410058693|ref|XP_003951016.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Pan
troglodytes]
gi|119614240|gb|EAW93834.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_a [Homo
sapiens]
Length = 301
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|326921905|ref|XP_003207194.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Meleagris gallopavo]
Length = 362
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 25 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 84
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 85 DAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 144
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 145 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 192
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 119 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 178
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 179 VLQKYHTINGHNAEVRKALSRQEM 202
>gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]
gi|133255|sp|P04256.3|ROA1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; Short=HDP; AltName: Full=Single-strand
RNA-binding protein; AltName: Full=hnRNP core protein A1
gi|204580|gb|AAA41314.1| helix destabilizing protein [Rattus norvegicus]
Length = 320
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALCKQEM 186
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|343961425|dbj|BAK62302.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pan troglodytes]
Length = 301
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEM 181
>gi|111306451|gb|AAI21134.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Ovis aries]
Length = 310
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Homo sapiens]
gi|397472158|ref|XP_003807623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Pan
paniscus]
gi|288558857|sp|P09651.5|ROA1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=hnRNP core protein A1
gi|119617168|gb|EAW96762.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|119617174|gb|EAW96768.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|380812310|gb|AFE78029.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Macaca
mulatta]
Length = 372
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|335347347|ref|NP_001229438.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
gi|410964601|ref|XP_003988842.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Felis catus]
gi|426224339|ref|XP_004006329.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Ovis aries]
gi|74222222|dbj|BAE26919.1| unnamed protein product [Mus musculus]
gi|149031878|gb|EDL86790.1| rCG50547, isoform CRA_b [Rattus norvegicus]
gi|149031880|gb|EDL86792.1| rCG50547, isoform CRA_b [Rattus norvegicus]
Length = 373
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|85060507|ref|NP_001034218.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Mus musculus]
gi|59808855|gb|AAH89340.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|62531241|gb|AAH92395.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|74144667|dbj|BAE27318.1| unnamed protein product [Mus musculus]
gi|74185136|dbj|BAE39169.1| unnamed protein product [Mus musculus]
gi|74219989|dbj|BAE40574.1| unnamed protein product [Mus musculus]
Length = 373
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|380792669|gb|AFE68210.1| heterogeneous nuclear ribonucleoprotein A1 isoform a, partial
[Macaca mulatta]
Length = 317
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|195054712|ref|XP_001994267.1| GH23661 [Drosophila grimshawi]
gi|193896137|gb|EDV95003.1| GH23661 [Drosophila grimshawi]
Length = 479
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 124/164 (75%), Gaps = 1/164 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
D+ E E LRK+FIGGL TT+E L+ F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 26 DEDDICELEHLRKLFIGGLAPYTTEEGLKVFYSQWGKVVDVVVMRDAATKRSRGFGFITY 85
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLR 124
+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +ED LR
Sbjct: 86 TKSAMVDTAQENRPHIIDGKTVEAKRALPRPERETRETNISVKKLFVGGLKDNHDEDCLR 145
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
EYF QFG + SV ++T+K TG +RGFAFIEF+DYD VDK +L +
Sbjct: 146 EYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQR 189
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL ++ L+ +F Q+G +V V ++ D T + RGF FI + + VD A
Sbjct: 126 SVKKLFVGGLKDNHDEDCLREYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKA 185
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ R H+I +V+ K+++
Sbjct: 186 ILQRQHSIKYVLVDVKKSI 204
>gi|440900708|gb|ELR51786.1| hypothetical protein M91_06025, partial [Bos grunniens mutus]
Length = 315
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 4 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 64 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 124 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 171
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 87 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 147 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 181
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 2 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 61
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 62 EVDAAMNARPHKVDGRVVE 80
>gi|426223452|ref|XP_004005889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ ++E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKEEM 186
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Homo sapiens]
gi|6754220|ref|NP_034577.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Mus musculus]
gi|114052384|ref|NP_001039376.1| heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|116175259|ref|NP_001070686.1| heterogeneous nuclear ribonucleoprotein A1 [Sus scrofa]
gi|148529006|ref|NP_001091892.1| heterogeneous nuclear ribonucleoprotein A1-like 1 [Pan troglodytes]
gi|308193354|ref|NP_001184040.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|73996139|ref|XP_848386.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Canis lupus familiaris]
gi|332864208|ref|XP_003318234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
gi|354503661|ref|XP_003513899.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Cricetulus
griseus]
gi|402886231|ref|XP_003906538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Papio
anubis]
gi|410058477|ref|XP_003954396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Pan troglodytes]
gi|410964599|ref|XP_003988841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Felis catus]
gi|426224335|ref|XP_004006327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Ovis aries]
gi|1350822|sp|P49312.2|ROA1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=HDP-1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName:
Full=Topoisomerase-inhibitor suppressed; AltName:
Full=hnRNP core protein A1
gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=Unwinding protein 1; Short=UP1;
AltName: Full=hnRNP core protein A1
gi|70819|pir||DDRT helix-destabilizing protein - rat
gi|87651|pir||S04617 heterogeneous ribonuclear particle protein A1 - human
gi|193324|gb|AAA37633.1| RNA binding protein [Mus musculus]
gi|296650|emb|CAA31191.1| hnrnp a1 protein [Homo sapiens]
gi|496898|emb|CAA56072.1| hnRNPcore protein A1 [Homo sapiens]
gi|1711242|dbj|BAA13162.1| TIS [Mus musculus]
gi|12803103|gb|AAH02355.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|12841583|dbj|BAB25267.1| unnamed protein product [Mus musculus]
gi|15082486|gb|AAH12158.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|16307046|gb|AAH09600.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|21707258|gb|AAH33714.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|26353286|dbj|BAC40273.1| unnamed protein product [Mus musculus]
gi|47125420|gb|AAH70315.1| HNRPA1 protein [Homo sapiens]
gi|49257442|gb|AAH73162.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|49522847|gb|AAH74502.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|51490837|emb|CAH18571.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|51873929|gb|AAH80675.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|53236995|gb|AAH83136.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|55930978|gb|AAH52296.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|56971262|gb|AAH88150.1| Hnrpa1 protein [Rattus norvegicus]
gi|67968511|dbj|BAE00617.1| unnamed protein product [Macaca fascicularis]
gi|74180018|dbj|BAE36552.1| unnamed protein product [Mus musculus]
gi|74183107|dbj|BAE22518.1| unnamed protein product [Mus musculus]
gi|74184983|dbj|BAE39104.1| unnamed protein product [Mus musculus]
gi|74189079|dbj|BAE39302.1| unnamed protein product [Mus musculus]
gi|74204144|dbj|BAE39837.1| unnamed protein product [Mus musculus]
gi|74204330|dbj|BAE39920.1| unnamed protein product [Mus musculus]
gi|74204859|dbj|BAE20929.1| unnamed protein product [Mus musculus]
gi|74214152|dbj|BAE40333.1| unnamed protein product [Mus musculus]
gi|74214339|dbj|BAE40409.1| unnamed protein product [Mus musculus]
gi|86823844|gb|AAI05414.1| Heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|115371763|gb|ABI96206.1| ROA1 [Sus scrofa]
gi|119617167|gb|EAW96761.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617175|gb|EAW96769.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617176|gb|EAW96770.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|146741382|dbj|BAF62347.1| heterogeneous nuclear ribonucleoprotein A1, transcript variant 1
[Pan troglodytes verus]
gi|148671984|gb|EDL03931.1| mCG15678, isoform CRA_b [Mus musculus]
gi|149031879|gb|EDL86791.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|149031881|gb|EDL86793.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|158255662|dbj|BAF83802.1| unnamed protein product [Homo sapiens]
gi|208966454|dbj|BAG73241.1| heterogeneous nuclear ribonucleoprotein A1 [synthetic construct]
gi|296487907|tpg|DAA30020.1| TPA: heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|335772612|gb|AEH58124.1| heterogeneous nuclear ribonucleoprotein A-like protein [Equus
caballus]
gi|380812306|gb|AFE78027.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
gi|380812308|gb|AFE78028.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
Length = 320
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Anolis
carolinensis]
Length = 354
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|444523821|gb|ELV13633.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 304
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 32 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 91
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 92 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 151
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 152 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 189
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 46/74 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 126 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 185
Query: 75 MSNRPHNIDGRVVE 88
+ + H I+G E
Sbjct: 186 VLQKYHTINGHNAE 199
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD +
Sbjct: 37 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 96
Query: 167 SKITLLLDRRVE 178
++ + R VE
Sbjct: 97 ARPHSIDGRVVE 108
>gi|74220381|dbj|BAE31416.1| unnamed protein product [Mus musculus]
Length = 320
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|355694911|gb|AER99826.1| heteroproteinous nuclear ribonucleoprotein A2/B1 [Mustela putorius
furo]
Length = 173
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 2 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 62 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 122 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 159
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 49/78 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 96 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 155
Query: 75 MSNRPHNIDGRVVETKRA 92
+ + H I+G E ++A
Sbjct: 156 VLQKYHTINGHNAEVRKA 173
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD +
Sbjct: 7 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 66
Query: 167 SKITLLLDRRVE 178
++ + R VE
Sbjct: 67 ARPHSIDGRVVE 78
>gi|195392302|ref|XP_002054798.1| GJ22593 [Drosophila virilis]
gi|194152884|gb|EDW68318.1| GJ22593 [Drosophila virilis]
Length = 474
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 124/164 (75%), Gaps = 1/164 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
D+ E E LRK+FIGGL TT+E L+ F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 24 DEDDICELEHLRKLFIGGLAPYTTEEGLKVFYSQWGKVVDVVVMRDAATKRSRGFGFITY 83
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLR 124
+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +ED LR
Sbjct: 84 TKSAMVDTAQENRPHIIDGKTVEAKRALPRPERETRETNISVKKLFVGGLKDNHDEDCLR 143
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
EYF QFG + SV ++T+K TG +RGFAFIEF+DYD VDK +L +
Sbjct: 144 EYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQR 187
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL ++ L+ +F Q+G +V V ++ D T + RGF FI + + VD A
Sbjct: 124 SVKKLFVGGLKDNHDEDCLREYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKA 183
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ R H+I +V+ K+++
Sbjct: 184 ILQRQHSIKYVLVDVKKSI 202
>gi|355766014|gb|EHH62484.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
fascicularis]
Length = 372
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|355564301|gb|EHH20801.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
mulatta]
Length = 372
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|74141832|dbj|BAE40987.1| unnamed protein product [Mus musculus]
Length = 320
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GEIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+GEI + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGEIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|344284648|ref|XP_003414077.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Loxodonta africana]
Length = 372
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRHYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGF F+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDQGSGKKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRHYFEQYGKIEVIEIMTDQGSGKKRGFVFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++ + + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKVLSKQEM 186
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|119617171|gb|EAW96765.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_e [Homo
sapiens]
Length = 317
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|36102|emb|CAA29922.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF QF
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQF 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G K+GFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + +GF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDRGSGKKKGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|49402291|ref|NP_956398.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|27882514|gb|AAH44442.1| Heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
Length = 422
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+A FEQWG + D VVMKDP TKRSRGFGF+TYS V
Sbjct: 28 EPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDEV 87
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+ +M RPH +DGR+VE KRAV R++ KP A+ TVKK+FVGG+K D EE+ LR+YF QF
Sbjct: 88 NASMDARPHKVDGRLVEPKRAVSREDSSKPFAHTTVKKIFVGGIKDDTEENHLRDYFDQF 147
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE V ++ + +TG KRGFAF+ F+D+D VD+IV+ K + E
Sbjct: 148 GKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCE 195
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D SK +++K+F+GG+ T + L+ +F+Q+G+I V +M D T RGF F+
Sbjct: 111 REDSSKPFAHTTVKKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFV 170
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 171 TFDDHDSVDRIVIQKYHTVNGHNCEVRKALSKQEM 205
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 99 GKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 157
G+P ++K+F+GGL + DD LR +F Q+GT+ ++ + T RGF F+ ++
Sbjct: 24 GQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSS 83
Query: 158 YDVVDKIVLSKITLLLDRRVE 178
D V+ + ++ + R VE
Sbjct: 84 VDEVNASMDARPHKVDGRLVE 104
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D +M+ RPH IDGRVVE KRAV R+E KP A+ TVKK+FVGG+K D EE LREYF ++
Sbjct: 64 DASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IES+ ++T+K++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R + +K +++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+
Sbjct: 87 REESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E ++A+ + E+
Sbjct: 147 TFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEM 181
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D +M+ RPH IDGRVVE KRAV R+E KP A+ TVKK+FVGG+K D EE LREYF ++
Sbjct: 64 DASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IES+ ++T+K++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R + +K +++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+
Sbjct: 87 REESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E ++A+ + E+
Sbjct: 147 TFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEM 181
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 123/155 (79%), Gaps = 1/155 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 134 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 193
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 194 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 253
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV
Sbjct: 254 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 288
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 217 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 276
Query: 64 TYSEAKMVDDAMS 76
T+ + VD +S
Sbjct: 277 TFDDHDSVDKIVS 289
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 132 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 191
Query: 160 VVD 162
VD
Sbjct: 192 EVD 194
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 94/158 (59%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 724 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 783
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 784 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 843
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 844 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 881
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 807 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 866
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 867 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 901
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 722 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 781
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 782 EVDAAMCARPHKVDGRVVE 800
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D +M+ RPH IDGRVVE KRAV R+E KP A+ TVKK+FVGG+K D EE LREYF ++
Sbjct: 64 DASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IES+ ++T+K++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R + +K +++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+
Sbjct: 87 REESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E ++A+ + E+
Sbjct: 147 TFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEM 181
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D +M+ RPH IDGRVVE KRAV R+E KP A+ TVKK+FVGG+K D EE LREYF ++
Sbjct: 64 DASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IES+ ++T+K++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 124 GKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 171
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R + +K +++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+
Sbjct: 87 REESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E ++A+ + E+
Sbjct: 147 TFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQEM 181
>gi|426341487|ref|XP_004036066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Gorilla gorilla gorilla]
Length = 320
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++++G KRGFAF+ F+D+D +DKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRDSGKKRGFAFVTFDDHDSLDKIVIQKYHTVKGHNCE 176
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRDSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + +D + + H + G E ++A+ + E+
Sbjct: 152 TFDDHDSLDKIVIQKYHTVKGHNCEVRKALSKQEM 186
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 36 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 95
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LREYF ++
Sbjct: 96 DAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKY 155
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 156 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 203
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 130 TVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 189
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 190 VVQKYHTINGHNCEVKKALSKQEM 213
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 34 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 93
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 94 EVDAAMSARPHKVDGRVVE 112
>gi|291415465|ref|XP_002723972.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR++F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G +RGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|291402435|ref|XP_002717573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR++F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKI++ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQK 166
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIIIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|335302749|ref|XP_003133427.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 447
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 105 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 164
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 165 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 224
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF ++G ++++ ++T++++G KRGF F F+D+D VDKIVL K + E
Sbjct: 225 YFEEYGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKIVLQKYHTINGHNAE 277
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G++ + ++ D + + RGFGF T+ + VD
Sbjct: 204 TVKKLFVGGIKEDTEEHHLRDYFEEYGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKI 263
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 264 VLQKYHTINGHNAEVRKALSRQEM 287
>gi|195503950|ref|XP_002098871.1| GE10609 [Drosophila yakuba]
gi|194184972|gb|EDW98583.1| GE10609 [Drosophila yakuba]
Length = 473
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R DD C E E LRK+FIGGL TT+++L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 21 REDDDIC-ELEHLRKLFIGGLAPYTTEDNLKVFYGQWGKVVDVVVMRDAATKRSRGFGFI 79
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +ED
Sbjct: 80 TYTKSLMVDKAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEDC 139
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD VDK +L K
Sbjct: 140 LREYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 185
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL ++ L+ +F Q+G +V V ++ D T + RGF F+ + + VD A
Sbjct: 122 SVKKLFVGGLKDNHDEDCLREYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 181
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H+I V+ K+++
Sbjct: 182 ILKKQHSIKYVHVDVKKSI 200
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL ED+L+ ++ Q+G + V ++ + T RGF FI + +VDK
Sbjct: 32 LRKLFIGGLAPYTTEDNLKVFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDKAQ 91
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 92 ENRPHIIDGKTVE 104
>gi|109131409|ref|XP_001082949.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Macaca mulatta]
gi|297304279|ref|XP_001082690.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Macaca mulatta]
Length = 320
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHPVNGHNCE 176
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHPVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 35 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 94
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LREYF ++
Sbjct: 95 DAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKY 154
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 155 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 202
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 129 TVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 188
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 189 VVQKYHTINGHNCEVKKALSKQEM 212
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 33 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 92
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 93 EVDAAMSARPHKVDGRVVE 111
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF +
Sbjct: 82 DAAMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFQSY 141
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 142 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 189
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + L+ +F+ +G+I + VM+D + + RGF F+
Sbjct: 105 REDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFQSYGKIETIEVMEDRQSGKKRGFAFV 164
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 165 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 199
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 96 DEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+ +P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+
Sbjct: 15 DQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVT 74
Query: 155 FNDYDVVDKIVLSKITLLLDRRVE 178
++ + VD + ++ + R VE
Sbjct: 75 YSCVEEVDAAMSARPHKVDGRVVE 98
>gi|157059865|dbj|BAF79678.1| heterogeneous nuclear ribonucleoprotein B0b [Rattus norvegicus]
Length = 313
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI L K + E
Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAE 183
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ H I+G E ++A+ R E+
Sbjct: 170 FLQKYHTINGHNAEVRKALSRQEM 193
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 28 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 87
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LREYF ++
Sbjct: 88 DAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKY 147
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 148 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 195
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 122 TVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 181
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 182 VVQKYHTINGHNCEVKKALSKQEM 205
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 86 VVETKRAVPRDEIG-KPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKE 143
V + KR R G +P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +
Sbjct: 10 VEDYKRKGRRSSQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQ 69
Query: 144 TGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
T RGF F+ ++ + VD + ++ + R VE
Sbjct: 70 TKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVE 104
>gi|194745069|ref|XP_001955015.1| GF18563 [Drosophila ananassae]
gi|190628052|gb|EDV43576.1| GF18563 [Drosophila ananassae]
Length = 474
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 126/167 (75%), Gaps = 2/167 (1%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
P +D C E E LRK+FIGGL TT+E L+ F+ QWG++VDVVVM+D TKRSRGFGF
Sbjct: 23 PDREDDIC-ELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDATTKRSRGFGF 81
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEED 121
ITY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +E+
Sbjct: 82 ITYTKSLMVDKAQENRPHVIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEE 141
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD VDK +L K
Sbjct: 142 CLREYFMQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQK 188
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL +E L+ +F Q+G +V V ++ D T + RGF FI + + VD A
Sbjct: 125 SVKKLFVGGLKDNHDEECLREYFMQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKA 184
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H+I V+ K+++
Sbjct: 185 ILQKQHSIKYVHVDVKKSI 203
>gi|157265559|ref|NP_001098083.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Rattus norvegicus]
gi|224493240|sp|A7VJC2.1|ROA2_RAT RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|157059861|dbj|BAF79676.1| heterogeneous nuclear ribonucleoprotein B1 [Rattus norvegicus]
Length = 353
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI L K + E
Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAE 183
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ H I+G E ++A+ R E+
Sbjct: 170 FLQKYHTINGHNAEVRKALSRQEM 193
>gi|213511640|ref|NP_001134235.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|209731708|gb|ACI66723.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|303664010|gb|ADM16122.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 228
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 122/162 (75%), Gaps = 1/162 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+ FEQWG + D VVM+DP KRSRGFGF TYS V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLREHFEQWGSLTDCVVMRDPANKRSRGFGFATYSGVNEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGR+VE KRAV R++ +P A+ TVKK+FVGG+K D E+ LR+YF QF
Sbjct: 68 DAAMEARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFEQF 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
G IE ++++T++ +G KRGFAF+ F+D+D VD+IV+ K L
Sbjct: 128 GKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTL 169
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D S+ +++K+F+GG+ T D L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 91 REDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFEQFGKIEVIDIMTDRTSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ R E+
Sbjct: 151 TFDDHDAVDRIVIQKYHTLNGHNCEVRKALSRQEM 185
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LRE+F Q+G++ ++ + RGF F ++ +
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLREHFEQWGSLTDCVVMRDPANKRSRGFGFATYSGVN 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMEARPHKVDGRLVE 84
>gi|194907807|ref|XP_001981631.1| GG12167 [Drosophila erecta]
gi|190656269|gb|EDV53501.1| GG12167 [Drosophila erecta]
Length = 472
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R DD C E E LRK+FIGGL TT+E+L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 20 REDDDIC-ELEHLRKLFIGGLAPYTTEENLKVFYGQWGKVVDVVVMRDAATKRSRGFGFI 78
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +E+
Sbjct: 79 TYTKSLMVDKAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEEC 138
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD VDK +L K
Sbjct: 139 LREYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL +E L+ +F Q+G +V V ++ D T + RGF F+ + + VD A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H+I V+ K+++
Sbjct: 181 ILKKQHSIKYVHVDVKKSI 199
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VDK
Sbjct: 31 LRKLFIGGLAPYTTEENLKVFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDKAQ 90
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 91 ENRPHIIDGKTVE 103
>gi|112421201|ref|NP_001036248.1| heterogeneous nuclear ribonucleoprotein A1 [Macaca mulatta]
gi|2500575|sp|Q28521.3|ROA1_MACMU RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|1332379|gb|AAB01436.1| hnRNP A1-gamma isoform [Macaca mulatta]
Length = 320
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D++ VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCE 176
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHNSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 KVDAAMNARPHKVDGRVVE 85
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 6 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 65
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LREYF ++
Sbjct: 66 DAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKY 125
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 126 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 173
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 89 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFV 148
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 149 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 183
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 100 KPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
+P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++
Sbjct: 3 EPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCV 62
Query: 159 DVVDKIVLSKITLLLDRRVE 178
+ VD + ++ + R VE
Sbjct: 63 EEVDAAMSARPHKVDGRVVE 82
>gi|291389275|ref|XP_002711073.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KR FAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 51/85 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + R F F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIG 99
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|119572425|gb|EAW52040.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a
[Homo sapiens]
Length = 309
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCE 176
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H + G E ++A+P+ E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVKGHNCEVRKALPKQEM 186
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRV 177
VD ++ +D RV
Sbjct: 67 EVD-AAMNTTPHKVDGRV 83
>gi|74209393|dbj|BAE23274.1| unnamed protein product [Mus musculus]
Length = 301
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL + + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQEYHTINGHNAE 171
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ H I+G E ++A+ R E+
Sbjct: 158 VLQEYHTINGHNAEVRKALSRQEM 181
>gi|80477437|gb|AAI08267.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
Length = 320
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCE 176
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H + G E ++A+P+ E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVKGHNCEVRKALPKQEM 186
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRV 177
VD ++ +D RV
Sbjct: 67 EVD-AAMNTTPHKVDGRV 83
>gi|58761496|ref|NP_001011724.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|58761498|ref|NP_001011725.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|190356061|sp|Q32P51.2|RA1L2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1-like 2;
Short=hnRNP A1-like 2; AltName: Full=hnRNP core protein
A1-like 2
gi|119572426|gb|EAW52041.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
gi|119572427|gb|EAW52042.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
Length = 320
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCE 176
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H + G E ++A+P+ E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVKGHNCEVRKALPKQEM 186
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRV 177
VD ++ +D RV
Sbjct: 67 EVD-AAMNTTPHKVDGRV 83
>gi|440905636|gb|ELR55990.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 180
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ +
Sbjct: 1 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEG 60
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 61 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 120
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 121 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 158
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 84 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 143
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 144 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 179
>gi|157059859|dbj|BAF79675.1| heterogeneous nuclear ribonucleoprotein A2 [Rattus norvegicus]
Length = 341
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKI L K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAE 171
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ H I+G E ++A+ R E+
Sbjct: 158 FLQKYHTINGHNAEVRKALSRQEM 181
>gi|291415463|ref|XP_002723971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR++F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G +RGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|291415461|ref|XP_002723970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR++F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G +RGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|387018108|gb|AFJ51172.1| Heterogeneous nuclear ribonucleoprotein A3-like [Crotalus
adamanteus]
Length = 225
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGALTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 91 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 151 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 185
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++G + ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGALTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMSARPHKVDGRVVE 84
>gi|29125866|emb|CAD67787.1| hn ribonucleoprotein A2 [Tetraodon nigroviridis]
Length = 191
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 123/158 (77%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 4 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVDEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE +R+YF +F
Sbjct: 64 DLAMGARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERF 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE ++++ ++ +G KRGFAF+ F+D+D VD+IV+ K
Sbjct: 124 GKIEIIDIIADRNSGKKRGFAFVTFDDHDPVDRIVIQK 161
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + ++ +FE++G+I + ++ D + + RGF F+
Sbjct: 87 REDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIIADRNSGKKRGFAFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+ E ++A+ R E+
Sbjct: 147 TFDDHDPVDRIVIQKYHTINSHNCEVRKALTRQEM 181
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++ D
Sbjct: 2 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVD 61
Query: 160 VVD 162
VD
Sbjct: 62 EVD 64
>gi|157059863|dbj|BAF79677.1| heterogeneous nuclear ribonucleoprotein B0a [Rattus norvegicus]
Length = 301
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+D+D VDKI L K + E
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAE 171
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ H I+G E ++A+ R E+
Sbjct: 158 FLQKYHTINGHNAEVRKALSRQEM 181
>gi|291402433|ref|XP_002717572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR++F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKI++ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCE 176
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIIIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|291402431|ref|XP_002717571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR++F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKI++ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCE 176
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIIIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|114577985|ref|XP_001144332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
Length = 320
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+F GGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFFGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
>gi|402908392|ref|XP_003916927.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Papio anubis]
Length = 343
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 126/167 (75%), Gaps = 1/167 (0%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
PE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + VD
Sbjct: 2 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVD 61
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+G
Sbjct: 62 AAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYG 121
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 122 KIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 168
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 84 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 143
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 144 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 178
>gi|390464176|ref|XP_003733182.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Callithrix jacchus]
Length = 320
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFDTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFDTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|349804307|gb|AEQ17626.1| putative heterogeneous nuclear ribonucleoprotein A3 [Hymenochirus
curtipes]
Length = 249
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF +
Sbjct: 69 DAAMTARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 176
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + L+ +FE +G+I + VM+D + + RGF F+
Sbjct: 92 REDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 152 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 186
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 96 DEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+ +P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+
Sbjct: 2 DQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVT 61
Query: 155 FNDYDVVDKIVLSKITLLLDRRVE 178
++ + VD + ++ + R VE
Sbjct: 62 YSCVEEVDAAMTARPHKVDGRVVE 85
>gi|47228652|emb|CAG07384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 323
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVDEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE +R+YF +F
Sbjct: 68 DLAMGARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERF 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++++ ++ +G KRGFAF+ F+D+D VD+IV+ K + E
Sbjct: 128 GKIEIIDIIADRNSGKKRGFAFVTFDDHDPVDRIVIQKYHTINSHNCE 175
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + ++ +FE++G+I + ++ D + + RGF F+
Sbjct: 91 REDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIIADRNSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+ E ++A+ R E+
Sbjct: 151 TFDDHDPVDRIVIQKYHTINSHNCEVRKALTRQEM 185
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++ D
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVD 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDLAMGARPHKVDGRVVE 84
>gi|296190480|ref|XP_002743214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Callithrix jacchus]
Length = 320
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+F GG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D +DKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNCE 176
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + +D + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|444520816|gb|ELV13038.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 205
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGF F+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|426341485|ref|XP_004036065.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Gorilla gorilla gorilla]
Length = 320
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDK V+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCE 176
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|291389273|ref|XP_002711072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KR FAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + R F F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRSFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|47218115|emb|CAG09987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 419
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 124/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TT+ESL+A FE+WG + D VVM++P KRSRGFGF+TYS + V
Sbjct: 2 EPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPSCKRSRGFGFVTYSSLREV 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D+AM RPH +DGRVVE KRAV R++ KP A+ +VKK+FVGG+K D EED +R+YF ++
Sbjct: 62 DEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKY 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE V+++ + TG KRGF F+ F+D+D VDKIV K + E
Sbjct: 122 GKIECVDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCE 169
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 60/101 (59%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K S++K+F+GG+ T ++ ++ +FE++G+I V +M++ T + RGF F+
Sbjct: 85 REDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERSTGKKRGFCFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
T+ + VD ++ + H I+ E ++A+ + E+ +N
Sbjct: 145 TFDDHDTVDKIVAQKYHTINSHNCEVRKALSKQEMNAISSN 185
>gi|291384354|ref|XP_002708769.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + ++ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|444727997|gb|ELW68462.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 274
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+++ ++T++++G KRGF F+ F+D+D V KIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVPFDDHDPVGKIVLQK 161
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R + K +++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+
Sbjct: 87 REESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + V + + H I+G E ++A+ R E+
Sbjct: 147 PFDDHDPVGKIVLQKYHTINGHNAEVRKALSRQEM 181
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD +
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 167 SKITLLLDRRVE 178
++ + R VE
Sbjct: 69 ARPHSIDGRVVE 80
>gi|291410921|ref|XP_002721736.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LR++FIGGL + TT+ESL++ FEQWG + D +VM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMA 187
>gi|358415649|ref|XP_003583166.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRV E KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DVAMNARPHKVDGRVGELKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRV 177
VD + ++ +D RV
Sbjct: 67 EVD-VAMNARPHKVDGRV 83
>gi|17738229|ref|NP_524520.1| ribonuclear protein at 97D, isoform B [Drosophila melanogaster]
gi|62472977|ref|NP_001014671.1| ribonuclear protein at 97D, isoform I [Drosophila melanogaster]
gi|62472987|ref|NP_001014672.1| ribonuclear protein at 97D, isoform H [Drosophila melanogaster]
gi|62472997|ref|NP_001014674.1| ribonuclear protein at 97D, isoform F [Drosophila melanogaster]
gi|400927|sp|Q02926.1|RB97D_DROME RecName: Full=Ribonucleoprotein RB97D
gi|158221|gb|AAA99873.1| ribonucleoprotein [Drosophila melanogaster]
gi|7301511|gb|AAF56633.1| ribonuclear protein at 97D, isoform B [Drosophila melanogaster]
gi|61679405|gb|AAX52999.1| ribonuclear protein at 97D, isoform F [Drosophila melanogaster]
gi|61679406|gb|AAX53000.1| ribonuclear protein at 97D, isoform H [Drosophila melanogaster]
gi|61679407|gb|AAX53001.1| ribonuclear protein at 97D, isoform I [Drosophila melanogaster]
Length = 471
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R +D C E E LRK+FIGGL TT+E+L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 20 REEDDIC-ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFI 78
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +E+
Sbjct: 79 TYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEEC 138
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD VDK +L K
Sbjct: 139 LREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL +E L+ +F Q+G +V V ++ D T + RGF F+ + + VD A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+
Sbjct: 31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 91 ENRPHIIDGKTVE 103
>gi|403296845|ref|XP_003939304.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Saimiri
boliviensis boliviensis]
Length = 320
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVG +K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+G + T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|313226215|emb|CBY21358.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE +RK+FIGGL Y TT++SL FF +WG++ D VVM+DP TKRSRGFGF+T+ +A+MV
Sbjct: 7 EPEQIRKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMV 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
DD MSNRPH +DGR VE KRAV R+E +P + +VK+MF+GG+K+ +D+ EYF ++
Sbjct: 67 DDCMSNRPHKLDGREVEAKRAVSREESHRPGIHKSVKRMFMGGIKENVTSEDVTEYFEKY 126
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +ESV ++ +K +G KRGF F+ F+DYDVVDKIV ++ ++ +E
Sbjct: 127 GKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIE 174
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 52/84 (61%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+S++++F+GG+ T E + +FE++G++ V +++D + + RGFGF+ + + +VD
Sbjct: 100 KSVKRMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDK 159
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
+ R H I G +E +A +++
Sbjct: 160 IVQTRRHVISGVSIEVSKAFSKED 183
>gi|119617172|gb|EAW96766.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_f [Homo
sapiens]
Length = 208
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/154 (61%), Positives = 122/154 (79%), Gaps = 1/154 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>gi|62473005|ref|NP_001014675.1| ribonuclear protein at 97D, isoform E [Drosophila melanogaster]
gi|62473015|ref|NP_001014676.1| ribonuclear protein at 97D, isoform D [Drosophila melanogaster]
gi|25009807|gb|AAN71075.1| AT15526p [Drosophila melanogaster]
gi|61679408|gb|AAX53002.1| ribonuclear protein at 97D, isoform D [Drosophila melanogaster]
gi|61679409|gb|AAX53003.1| ribonuclear protein at 97D, isoform E [Drosophila melanogaster]
Length = 434
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R +D C E E LRK+FIGGL TT+E+L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 20 REEDDIC-ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFI 78
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +E+
Sbjct: 79 TYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEEC 138
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD VDK +L K
Sbjct: 139 LREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL +E L+ +F Q+G +V V ++ D T + RGF F+ + + VD A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+
Sbjct: 31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 91 ENRPHIIDGKTVE 103
>gi|390465683|ref|XP_003733453.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E LRK+FIGGL + TTDESL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 ESEQLRKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ + ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKESEQLRKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|313240342|emb|CBY32684.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE +RK+FIGGL Y TT++SL FF +WG++ D VVM+DP TKRSRGFGF+T+ +A+MV
Sbjct: 7 EPEQIRKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMV 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
DD MSNRPH +DGR VE KRAV R+E +P + +VK+MF+GG+K+ +D+ EYF ++
Sbjct: 67 DDCMSNRPHKLDGREVEAKRAVSREESHRPGIHKSVKRMFMGGIKENVTSEDVTEYFEKY 126
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +ESV ++ +K +G KRGF F+ F+DYDVVDKIV ++ ++ +E
Sbjct: 127 GKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIE 174
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 52/84 (61%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+S++++F+GG+ T E + +FE++G++ V +++D + + RGFGF+ + + +VD
Sbjct: 100 KSVKRMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDK 159
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
+ R H I G +E +A +++
Sbjct: 160 IVQTRRHVISGVSIEVSKAFSKED 183
>gi|426241336|ref|XP_004014547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKGSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKGSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|24650422|ref|NP_733172.1| ribonuclear protein at 97D, isoform A [Drosophila melanogaster]
gi|62472991|ref|NP_001014673.1| ribonuclear protein at 97D, isoform G [Drosophila melanogaster]
gi|62473028|ref|NP_001014677.1| ribonuclear protein at 97D, isoform C [Drosophila melanogaster]
gi|158222|gb|AAA99872.1| ribonucleoprotein [Drosophila melanogaster]
gi|23172392|gb|AAN14092.1| ribonuclear protein at 97D, isoform A [Drosophila melanogaster]
gi|61679403|gb|AAX52997.1| ribonuclear protein at 97D, isoform C [Drosophila melanogaster]
gi|61679404|gb|AAX52998.1| ribonuclear protein at 97D, isoform G [Drosophila melanogaster]
Length = 465
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R +D C E E LRK+FIGGL TT+E+L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 20 REEDDIC-ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFI 78
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +E+
Sbjct: 79 TYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEEC 138
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD VDK +L K
Sbjct: 139 LREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL +E L+ +F Q+G +V V ++ D T + RGF F+ + + VD A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+
Sbjct: 31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 91 ENRPHIIDGKTVE 103
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 32 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 91
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 92 DAAMAARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 151
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 152 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 199
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 126 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 185
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 186 VVQKYHTINGHNCEVKKALSKQEM 209
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 30 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 89
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 90 EVDAAMAARPHKVDGRVVE 108
>gi|213625123|gb|AAI69881.1| Unknown (protein for MGC:196608) [Xenopus laevis]
Length = 348
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 126/162 (77%), Gaps = 1/162 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D +MS RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF +
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGY 141
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K +
Sbjct: 142 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTI 183
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + L+ +FE +G+I + VM+D + + RGF F+
Sbjct: 105 REDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFV 164
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
T+ + VD + + H I+ E K+A+ + E+ A
Sbjct: 165 TFDDHDTVDKIVVQKYHTINLHNCEVKKALSKQEMQTASAQ 205
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 96 DEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+ +P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+
Sbjct: 15 DQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVT 74
Query: 155 FNDYDVVDKIVLSKITLLLDRRVE 178
++ + VD + ++ + R VE
Sbjct: 75 YSCVEEVDASMSARPHKVDGRVVE 98
>gi|291410919|ref|XP_002721735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LR++FIGGL + TT+ESL++ FEQWG + D +VM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
>gi|148682805|gb|EDL14752.1| mCG117968 [Mus musculus]
Length = 317
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + + VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 6 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTNCVVMRDPNTKRSRGFGFVTYATVEEV 65
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KR V R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 66 DAAMNARPHKVDGRVVEPKRTVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 125
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 126 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 173
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 89 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 148
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 149 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 183
>gi|147905111|ref|NP_001081320.1| heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Xenopus
laevis]
gi|1710626|sp|P51992.1|RO32_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 2;
AltName: Full=hnRNP A3(B)
gi|214747|gb|AAA49950.1| ribonucleoprotein [Xenopus laevis]
Length = 385
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 126/162 (77%), Gaps = 1/162 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D +MS RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF +
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGY 141
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K +
Sbjct: 142 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTI 183
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + L+ +FE +G+I + VM+D + + RGF F+
Sbjct: 105 REDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFV 164
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+ E K+A+ + E+
Sbjct: 165 TFDDHDTVDKIVVQKYHTINLHNCEVKKALSKQEM 199
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 96 DEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+ +P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+
Sbjct: 15 DQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVT 74
Query: 155 FNDYDVVDKIVLSKITLLLDRRVE 178
++ + VD + ++ + R VE
Sbjct: 75 YSCVEEVDASMSARPHKVDGRVVE 98
>gi|148697232|gb|EDL29179.1| mCG1035404 [Mus musculus]
Length = 239
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|402867876|ref|XP_003898055.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDE+L++ FEQWG + D VVM+DP TKRSRGFGF+TY+ V
Sbjct: 9 EPEQLRKLFIGGLSFETTDETLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVGEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDK V+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCE 176
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
PE ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ +
Sbjct: 7 PEEPEQLRKLFIGGLSFETTDETLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVG 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|291389620|ref|XP_002711397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR++F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 51/85 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIG 99
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|291384352|ref|XP_002708768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + ++ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|410896922|ref|XP_003961948.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Takifugu rubripes]
Length = 336
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D + EPE LRK+FIGGL + TT+ESL+A FE+WG + D VVM++P KRSRGFGF+TY
Sbjct: 2 EDRELREPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTY 61
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLR 124
S + VD+AM RPH +DGRVVE KRAV R++ KP A+ +VKK+FVGG+K D EED +R
Sbjct: 62 SCLREVDEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIR 121
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
+YF ++G IE V+++ + +G KRGF F+ F+D+D VDKIV K +
Sbjct: 122 DYFEKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTI 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 60/101 (59%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K S++K+F+GG+ T ++ ++ +FE++G+I V +M++ + + RGF F+
Sbjct: 91 REDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERSSGKKRGFCFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
T+ + VD ++ + H I+ E ++A+ + E+ +N
Sbjct: 151 TFDDHDTVDKIVAQKYHTINLHNCEVRKALSKQEMNAISSN 191
>gi|359063952|ref|XP_003585907.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 320
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGF F+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHSCE 176
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
T+ + VD + + H ++G E ++A+ + E
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHSCEVRKALSKQE 185
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|440901911|gb|ELR52772.1| Heterogeneous nuclear ribonucleoprotein A3, partial [Bos grunniens
mutus]
Length = 182
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 1 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 60
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 61 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 120
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 121 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 158
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 95 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 154
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 155 VVQKYHTINGHNCEVKKALSKQEM 178
>gi|410036104|ref|XP_525973.4| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Pan
troglodytes]
Length = 371
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 57 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 116
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 117 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 176
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 177 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 224
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 151 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 210
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 211 VVQKYHTINGHNCEVKKALSKQEM 234
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 55 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 114
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 115 EVDAAMCARPHKVDGRVVE 133
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 144 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 203
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 204 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 263
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 264 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 311
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 227 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 286
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 287 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 321
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 142 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 201
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 202 EVDAAMCARPHKVDGRVVE 220
>gi|403283527|ref|XP_003933170.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Saimiri boliviensis boliviensis]
Length = 299
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGFI Y+ A+ V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFIRYATAEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH + GRVVE KRAV R++ +P A+ TVKK+F+GG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVHGRVVEPKRAVSREDSQRPGAHLTVKKIFLGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VD IV+ K + E
Sbjct: 129 GKIEVIEIITDRGSGKKRGFAFVAFDDHDSVDMIVIQKYHTVNGHNCE 176
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + ++ D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFLGGIKEDTEEHHLRDYFEQYGKIEVIEIITDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 AFDDHDSVDMIVIQKYHTVNGHNCEVRKALSKQEM 186
>gi|184185549|gb|ACC68948.1| heterogeneous nuclear ribonucleoprotein A1 (predicted) [Rhinolophus
ferrumequinum]
Length = 299
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ EQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSRSEQWGALTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKAISKQEM 185
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|296188846|ref|XP_002742529.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK FIGGL + TTDESL++ FEQWG + D VVM+D TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKPFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEL 186
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 74 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 133
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 134 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 193
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 194 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 241
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 168 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 227
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 228 VVQKYHTINGHNCEVKKALSKQEM 251
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 94 PRDEIGK-PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFA 151
PR G P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF
Sbjct: 64 PRRSPGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFG 123
Query: 152 FIEFNDYDVVDKIVLSKITLLLDRRVE 178
F+ ++ + VD + ++ + R VE
Sbjct: 124 FVTYSCVEEVDAAMCARPHKVDGRVVE 150
>gi|390474589|ref|XP_002757922.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Callithrix jacchus]
Length = 320
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQPRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A++ RPHN+DGRVVE KRAV R++ +P+A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAVNARPHNVDGRVVEPKRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KR FAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + R F F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
>gi|390474591|ref|XP_002757923.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Callithrix jacchus]
Length = 339
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQPRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A++ RPHN+DGRVVE KRAV R++ +P+A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAVNARPHNVDGRVVEPKRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KR FAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + R F F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like, partial
[Monodelphis domestica]
Length = 356
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 6 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 65
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 66 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 125
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 126 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 173
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 100 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 159
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 160 VVQKYHTINGHNCEVKKALSKQEM 183
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 4 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 63
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 64 EVDAAMCARPHKVDGRVVE 82
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|291389618|ref|XP_002711396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR++F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|291389616|ref|XP_002711395.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR++F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|383416553|gb|AFH31490.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 272
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 94 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 153
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 154 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 213
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 214 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 261
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 94/168 (55%), Gaps = 28/168 (16%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGF F+TYS
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVTYS----- 84
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQF 130
VE E P+ ++K+F+GGL + DD LRE+F ++
Sbjct: 85 --------------CVE--------EGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKW 122
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+ ++ + +T RGF F+ ++ + VD + ++ + R VE
Sbjct: 123 GTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVE 170
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 188 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 247
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 248 VVQKYHTINGHNCEVKKALSKQEM 271
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 156
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVTYS 84
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 130/173 (75%), Gaps = 2/173 (1%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ +EPE +RK+FIGGLDY+T + +L+ ++ +WGEI+D VVM DP +KRSRGFGF+TY+
Sbjct: 13 NGGSSEPEYMRKLFIGGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYA 72
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
+++MVD AM+ RPH ID R VE KRA+PR++ + N +VKK+FVGGL + E +DLR
Sbjct: 73 DSQMVDQAMAQRPHIIDNRTVEPKRAIPREQSSG-DTNMSVKKLFVGGLSTETEAEDLRN 131
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF ++G+IE V + T ++TG KRGF F+ F+DYD VDK+VL + ++ +R E
Sbjct: 132 YFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVLQRHHMIKGKRTE 184
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL T E L+ +F ++G I +V++ + T R RGFGF+T+ + VD
Sbjct: 111 SVKKLFVGGLSTETEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKV 170
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVG 113
+ R H I G+ E K+A+ + E+ K A K F+G
Sbjct: 171 VLQRHHMIKGKRTEVKKALSKIEMEK----AKRKDSFMG 205
>gi|148673673|gb|EDL05620.1| mCG50656 [Mus musculus]
Length = 271
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|94482853|gb|ABF22468.1| heterogeneous nuclear ribonucleoprotein A3 [Takifugu rubripes]
Length = 341
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 123/162 (75%), Gaps = 1/162 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TT+ESL+A FE+WG + D VVM++P KRSRGFGF+TYS + V
Sbjct: 13 EPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREV 72
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D+AM RPH +DGRVVE KRAV R++ KP A+ +VKK+FVGG+K D EED +R+YF ++
Sbjct: 73 DEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKY 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
G IE V+++ + +G KRGF F+ F+D+D VDKIV K +
Sbjct: 133 GKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTI 174
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 60/101 (59%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K S++K+F+GG+ T ++ ++ +FE++G+I V +M++ + + RGF F+
Sbjct: 96 REDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERSSGKKRGFCFV 155
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
T+ + VD ++ + H I+ E ++A+ + E+ +N
Sbjct: 156 TFDDHDTVDKIVAQKYHTINLHNCEVRKALSKQEMNAISSN 196
>gi|113673508|ref|NP_001038904.1| heterogeneous nuclear ribonucleoprotein A3 [Danio rerio]
gi|112418968|gb|AAI22384.1| Heterogeneous nuclear ribonucleoprotein A3 [Danio rerio]
Length = 234
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 123/160 (76%), Gaps = 3/160 (1%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
DSK EPE LRK+FIGGL + TT++SL+A FEQWG++ D VVM+DP KRSRGFGF+TYS
Sbjct: 5 DSK--EPEQLRKLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYS 62
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +RE
Sbjct: 63 SVSEVDAAMTARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIRE 122
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
YF +G IE+++++ + TG KRGF F+ F+D+D VDKIV
Sbjct: 123 YFECYGKIETIDIMEERSTGKKRGFCFVTFDDHDTVDKIV 162
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K +++K+F+GG+ T + ++ +FE +G+I + +M++ T + RGF F+
Sbjct: 91 REDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFECYGKIETIDIMEERSTGKKRGFCFV 150
Query: 64 TYSEAKMVD 72
T+ + VD
Sbjct: 151 TFDDHDTVD 159
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL + ED LR +F Q+G + ++ + RGF F+ ++ VD +
Sbjct: 12 LRKLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSVSEVDAAM 71
Query: 166 LSKITLLLDRRVE 178
++ + R VE
Sbjct: 72 TARPHKVDGRVVE 84
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCE 197
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHSCEVKKALSKQEM 207
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRA+ R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAISREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|402864694|ref|XP_003896588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 320
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TT+ESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTEESLRSHFEQWGTLADCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+ F Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDCFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDCFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|355750652|gb|EHH54979.1| hypothetical protein EGM_04098, partial [Macaca fascicularis]
Length = 326
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 91 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 151 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 185
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|392339470|ref|XP_003753820.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Rattus norvegicus]
Length = 341
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFCKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DVAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGXKRGFGFVTFDDHDPVDKIVLQK 161
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGXKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H +G E ++A+ R E+
Sbjct: 158 VLQKYHTKNGHNAEVRKALSRQEM 181
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD + +
Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDVAMAA 69
Query: 168 KITLLLDRRVE 178
+ + R VE
Sbjct: 70 RPHSIDGRVVE 80
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 ELEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D +DKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNCE 176
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + +D + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKELEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|297681162|ref|XP_002818335.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pongo abelii]
Length = 321
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL++ TT+ESL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPKQLRKLFIGGLNFETTNESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRA+ R++ +P A+ TVKK+FVGG+ KD EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAISREDSQRPGAHLTVKKIFVGGIKKDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKKDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G V E ++A+ + E+
Sbjct: 152 TFDDHDSVDKTVIQKYHTVNGHVCEVRKALSKQEM 186
>gi|405977263|gb|EKC41722.1| Heterogeneous nuclear ribonucleoprotein A2-like protein 1
[Crassostrea gigas]
Length = 363
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL Y TTD +L+++FE+WG I D VVM DP TKRSRGFGFITY + M+
Sbjct: 37 EAEQYRKLFIGGLSYETTDSTLKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYEKVAML 96
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQF 130
D+ +NRPH IDGR VETKRA+PR+E G+ E+ + +KMFVGGL+D EDD+RE F ++
Sbjct: 97 DECQANRPHKIDGREVETKRAMPREESGRSESQKSNEKMFVGGLRDTTTEDDVREAFQEY 156
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++ +K T RGF F+ F+DYD VDK VL K + D+ VE
Sbjct: 157 GNIKNIELIKDKATNKTRGFCFVTFDDYDPVDKCVLKKRFKICDKDVE 204
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 56/95 (58%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +S K+F+GGL TT++ ++ F+++G I ++ ++KD T ++RGF F
Sbjct: 119 PREESGRSESQKSNEKMFVGGLRDTTTEDDVREAFQEYGNIKNIELIKDKATNKTRGFCF 178
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
+T+ + VD + + I + VE K+A ++E
Sbjct: 179 VTFDDYDPVDKCVLKKRFKICDKDVEVKKAENKNE 213
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
PEA +K+F+GGL + D L+ YF ++GTI ++T+ +T RGF FI +
Sbjct: 36 PEAEQ-YRKLFIGGLSYETTDSTLKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYEKVA 94
Query: 160 VVDKIVLSKITLLLDRRVE 178
++D+ ++ + R VE
Sbjct: 95 MLDECQANRPHKIDGREVE 113
>gi|296216773|ref|XP_002754712.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+ Y+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVRYAAVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ R H +DGRVVE KRAV R++ +P A+ TVKK+F+GG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARSHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFIGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEMIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+FIGG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFIGGIKEDTEEHHLRDYFEQYGKIEMIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVRYAAVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARSHKVDGRVVE 85
>gi|332206587|ref|XP_003252377.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Nomascus leucogenys]
Length = 321
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL + TT+ESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 10 EPKQLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 69
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRA+ R++ +P+A+ TVKK+FVGG+K D EE LR YF Q+
Sbjct: 70 DAAMNARPHKVDGRVVEPKRAISREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRGYFEQY 129
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKI++ K
Sbjct: 130 GKIEVIEIMTDQGSGKKRGFAFLTFDDHDSVDKIIIQK 167
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 93 REDSQRPDAHLTVKKIFVGGIKEDTEEHHLRGYFEQYGKIEVIEIMTDQGSGKKRGFAFL 152
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G + E ++A+ + E+
Sbjct: 153 TFDDHDSVDKIIIQKYHTVNGHICEVRKALSKQEM 187
>gi|194388148|dbj|BAG65458.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFATYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFATYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|296209046|ref|XP_002751367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Callithrix jacchus]
Length = 320
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ EQWG + D VVM+D TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR + Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|195165900|ref|XP_002023776.1| GL27263 [Drosophila persimilis]
gi|194105936|gb|EDW27979.1| GL27263 [Drosophila persimilis]
Length = 226
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/159 (62%), Positives = 121/159 (76%), Gaps = 2/159 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R DD C E E LRK+FIGGL TT+E L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 23 REDDDIC-ELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDAATKRSRGFGFI 81
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +ED
Sbjct: 82 TYTKSAMVDKAQENRPHIIDGKTVEAKRALPRPERETRETNISVKKLFVGGLKDNHDEDC 141
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 161
LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD V
Sbjct: 142 LREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAV 180
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL E+ L+ ++ Q+G + V ++ + T RGF FI + +VDK
Sbjct: 34 LRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVDKAQ 93
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 94 ENRPHIIDGKTVE 106
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGR VE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCE 175
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHSCEVKKALSKQEM 185
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRAVE 84
>gi|296209042|ref|XP_002751365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Callithrix jacchus]
Length = 375
Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ EQWG + D VVM+D TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR + Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|440908270|gb|ELR58311.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 315
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 124/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFG +TY+ + V
Sbjct: 8 EPEQLWKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGLVTYATVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGR VE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 68 DAAMNARPHKVDGRAVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 175
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 91 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 151 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 185
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ + K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF + + +
Sbjct: 6 PKEPEQLWKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGLVTYATVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMNARPHKVDGRAVE 84
>gi|148230657|ref|NP_001081318.1| heterogeneous nuclear ribonucleoprotein A3 homolog 1 [Xenopus
laevis]
gi|1710625|sp|P51968.1|RO31_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 1;
AltName: Full=hnRNP A3(A)
gi|214745|gb|AAA49949.1| ribonucleoprotein [Xenopus laevis]
Length = 373
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D +MS RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+Y +
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYSESY 141
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 142 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 189
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T + L+ + E +G+I + VM+D + + RGF F+
Sbjct: 105 REDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFV 164
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 165 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 199
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 96 DEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+ P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+
Sbjct: 15 DQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVT 74
Query: 155 FNDYDVVDKIVLSKITLLLDRRVE 178
++ + VD + ++ + R VE
Sbjct: 75 YSCVEEVDASMSARPHKVDGRVVE 98
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGR VE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCE 197
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHSCEVKKALSKQEM 207
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRAVE 106
>gi|397520388|ref|XP_003830301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 320
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + VVM+DP TKRSRGF F+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTACVVMRDPNTKRSRGFEFVTYAAVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTACVVMRDPNTKRSRGFEFVTYAAVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|119597384|gb|EAW76978.1| hCG2023776 [Homo sapiens]
Length = 317
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL + TT+ESL++ FEQWG ++D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPKQLRKLFIGGLSFETTNESLRSHFEQWGTLMDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE+KRAV R++ +P A+ TVKK+FVGG+K D +E LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVESKRAVSREDSQRPGAHLTVKKIFVGGIKEDTKEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTKEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G + E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHICEVRKALSKQEM 186
>gi|426247087|ref|XP_004017318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ L K+FIGGL + TT+ESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPKQLWKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
>gi|426254471|ref|XP_004020902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 VAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ Y
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVT---YA 63
Query: 160 VVDKIVLS 167
V+++V +
Sbjct: 64 TVEEVVAA 71
>gi|395835057|ref|XP_003790500.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Otolemur
garnettii]
Length = 373
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 124/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG VM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|344268345|ref|XP_003406021.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Loxodonta africana]
Length = 348
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 123/155 (79%), Gaps = 1/155 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 90 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 149
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 150 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 209
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV
Sbjct: 210 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 244
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 88 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 147
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 148 EVDAAMCARPHKVDGRVVE 166
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RP+ +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPYKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPYKVDGRVVE 84
>gi|395843943|ref|XP_003794730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Otolemur garnettii]
Length = 251
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM PH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCALPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 49/77 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKR 91
+ + H I+G E K+
Sbjct: 184 VVQKYHTINGHNCEVKK 200
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLS 167
VD + +
Sbjct: 88 EVDAAMCA 95
>gi|444723112|gb|ELW63776.1| Heterogeneous nuclear ribonucleoprotein A3 [Tupaia chinensis]
Length = 300
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 123/155 (79%), Gaps = 1/155 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 31 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 90
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF +F
Sbjct: 91 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKF 150
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV
Sbjct: 151 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 185
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 114 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKFGKIETIEVMEDRQSGKKRGFAFV 173
Query: 64 TYSEAKMVD 72
T+ + VD
Sbjct: 174 TFDDHDTVD 182
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 29 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 88
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 89 EVDAAMCARPHKVDGRVVE 107
>gi|432098521|gb|ELK28236.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 316
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E LRK+FIGGL + TT+ESL++ FEQWG + D VV++DP TKRSRGFGF+TY+ + V
Sbjct: 9 ESEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D E LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEVHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + R E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGRSCE 176
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEVHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++GR E ++A+P+ E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGRSCEVRKALPKQEM 186
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ + ++K+F+GGL + + LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKESEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|328708038|ref|XP_001949057.2| PREDICTED: hypothetical protein LOC100160789 [Acyrthosiphon pisum]
Length = 401
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 124/167 (74%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP RK+FIGGLDY T++SL+ FE WGEIVDVVV+KDPITKRSRGFGF+ YS++ MV
Sbjct: 14 EPVQTRKLFIGGLDYSATEDSLRNTFEVWGEIVDVVVIKDPITKRSRGFGFVIYSKSSMV 73
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AMSN PHN++GR VETKRAV RD+I KP + VKKMF+ G+K+Q E +L EYF +FG
Sbjct: 74 DRAMSNGPHNVNGRNVETKRAVSRDDIDKPNSKIAVKKMFIYGIKEQSEINLVEYFKKFG 133
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I + +VT K +G ++G+ FIE+++ VD+ K L+ R++E
Sbjct: 134 NIIHIKIVTAKNSGERKGYGFIEYDNTISVDQATRIKSHLVAGRKLE 180
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+FI G+ ++ +L +F+++G I+ + ++ + +G+GFI Y VD A
Sbjct: 108 AVKKMFIYGIK-EQSEINLVEYFKKFGNIIHIKIVTAKNSGERKGYGFIEYDNTISVDQA 166
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ H + GR +E +A + +I
Sbjct: 167 TRIKSHLVAGRKLEVSKAFTQTDI 190
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 97 EIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 155
E+G E T +K+F+GGL ED LR F +G I V ++ + T RGF F+ +
Sbjct: 9 EVGYLEPVQT-RKLFIGGLDYSATEDSLRNTFEVWGEIVDVVVIKDPITKRSRGFGFVIY 67
Query: 156 NDYDVVDKIVLSKITLLLDRRVE 178
+ +VD+ + + + R VE
Sbjct: 68 SKSSMVDRAMSNGPHNVNGRNVE 90
>gi|402887374|ref|XP_003907069.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402887376|ref|XP_003907070.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 125/168 (74%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL + T DESL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPKQLRKLFIGGLSFETIDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE K AV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVNEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVNEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLRKLFIGGLSFETIDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|119923161|ref|XP_001251082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2
isoform 2 [Bos taurus]
gi|297471765|ref|XP_002685448.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2 [Bos
taurus]
gi|296490543|tpg|DAA32656.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 122/158 (77%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FIGGL + T DESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLWKLFIGGLRFETIDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGR VE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRAVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDQGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G + ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCQVRKALSKQEM 186
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ + K+F+GGL+ + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLWKLFIGGLRFETIDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRAVE 85
>gi|296194380|ref|XP_002744925.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 124/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
+PE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 KPEWLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ + A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRQGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE ++T++ +G KR FAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVTEIMTDRGSGKKRSFAFVTFDDHDTVDKIVIQKYHTVNGHNCE 176
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I +M D + + R F F+
Sbjct: 92 REDSQRQGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTEIMTDRGSGKKRSFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDTVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKKPEWLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
A+ RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 AAALCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQEM 185
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
V + ++ + R VE
Sbjct: 66 EVAAALCARPHKVDGRVVE 84
>gi|403257202|ref|XP_003921219.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 299
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 124/169 (73%), Gaps = 1/169 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
+PE LRK+FIGGL + TTDESL+ FEQWG + D VVMK P TKRSRGFGFITY+ +
Sbjct: 8 NKPEQLRKLFIGGLSFETTDESLRTHFEQWGTLTDCVVMKHPNTKRSRGFGFITYATVEE 67
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VD A++ +PH +DGRVVE KRAV R++ +P A+ TVKK+ VGG+K D EE LR+YF Q
Sbjct: 68 VDAALNAKPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKISVGGIKEDTEEHHLRDYFEQ 127
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+G IE + ++T++ +G KRGFAF+ FND+D +DKIV+ K + E
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFNDHDSMDKIVIQKYHTVNGHNCE 176
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+ +GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKISVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+++ +D + + H ++G E ++A+ + E+
Sbjct: 152 TFNDHDSMDKIVIQKYHTVNGHNCEVRKALSKQEM 186
>gi|291393062|ref|XP_002713027.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG ++D VVM+DP TKRSR FGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DVAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G K+GFA + F+D+D +DKIV+ K
Sbjct: 129 GKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKIVIQK 166
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 51/85 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + +GF +T+ + +D
Sbjct: 103 TVKKIFVGGIKEDTEERHLRDYFEQYGKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIG 99
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T R F F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>gi|402882999|ref|XP_003905018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Papio
anubis]
Length = 378
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE K+AV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKKAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G K GFAF+ F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKTGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + GF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKTGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQEM 207
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|119621693|gb|EAX01288.1| hCG2020860, isoform CRA_a [Homo sapiens]
Length = 214
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/149 (60%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYD 159
G IE + ++T++ +G KRGFAF+ F+D+D
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHD 157
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>gi|324520993|gb|ADY47759.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 339
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDESL+ F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MV
Sbjct: 11 EPEQFRKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMV 70
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQF 130
D+AM+NRPH +DG+ V+ KRAVPRD + EAN + K+++V G++++ E L EYF +F
Sbjct: 71 DEAMANRPHIVDGKTVDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKF 130
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
GT+ ++ +K TG RGFAFI F+DYD VDK VL K
Sbjct: 131 GTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLK 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 3 PRYDDSKCTEPE-SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D S+ TE S +++++ G+ T++ L+ +F ++G ++ ++ D T + RGF
Sbjct: 93 PR-DASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFA 151
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
FIT+ + VD + + H I + K+A+ ++E+ K +
Sbjct: 152 FITFDDYDPVDKCVLLKSHQISNFRCDVKKALSKEEMAKAQ 192
>gi|390470311|ref|XP_003734270.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Callithrix jacchus]
Length = 191
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 123/158 (77%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K+ EE +LR+YF +
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEHTEEYNLRDYFENY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDK+V K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVAFDDHDTVDKLVGKK 187
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE +G+I + VM+D + + RGF F+ + + VD
Sbjct: 124 TVKKIFVGGIKEHTEEYNLRDYFENYGKIETIEVMEDRQSGKKRGFAFVAFDDHDTVDKL 183
Query: 75 MSNRPHN 81
+ + HN
Sbjct: 184 VGKKSHN 190
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|324510912|gb|ADY44557.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 323
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDESL+ F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MV
Sbjct: 17 EPEQFRKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQF 130
D+AM+NRPH +DG+ V+ KRAVPRD + EAN + K+++V G++++ E L EYF +F
Sbjct: 77 DEAMANRPHIVDGKTVDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKF 136
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
GT+ ++ +K TG RGFAFI F+DYD VDK VL K
Sbjct: 137 GTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLK 174
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 3 PRYDDSKCTEPE-SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D S+ TE S +++++ G+ T++ L+ +F ++G ++ ++ D T + RGF
Sbjct: 99 PR-DASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFA 157
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
FIT+ + VD + + H I + K+A+ ++E+ K +
Sbjct: 158 FITFDDYDPVDKCVLLKSHQISNFRCDVKKALSKEEMAKAQ 198
>gi|213513508|ref|NP_001134615.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
gi|209734656|gb|ACI68197.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
Length = 339
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TT+ESL+ FEQWG + D VVM+DP KRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D M+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D ED +REYF +
Sbjct: 68 DACMAARPHKVDGRVVEPKRAVSREDSNRPGAHLTVKKIFVGGIKEDTREDHIREYFETY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE+++++ + TG KRGF F+ F+D D VDKIV K + E
Sbjct: 128 GRIETIDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKYHTINSHNCE 175
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ +++K+F+GG+ T ++ ++ +FE +G I + +M++ T + RGF F+
Sbjct: 91 REDSNRPGAHLTVKKIFVGGIKEDTREDHIREYFETYGRIETIDIMEERATGKKRGFCFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
++ + VD ++ + H I+ E ++A+P+ E+
Sbjct: 151 SFDDNDTVDKIVAQKYHTINSHNCEVRKALPKQEM 185
>gi|348570610|ref|XP_003471090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 356
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+ P TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDRVVMRVPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCE 175
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 91 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 151 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 185
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDRVVMRVPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|109098438|ref|XP_001091114.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
gi|109098440|ref|XP_001091244.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 4 [Macaca mulatta]
gi|297263360|ref|XP_002798798.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 320
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D V M+DP TKRSRGF F+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVAMRDPNTKRSRGFRFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE K AV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDK V+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCE 176
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ + + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVAMRDPNTKRSRGFRFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|324505861|gb|ADY42513.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 357
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDESL+ F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MV
Sbjct: 17 EPEQFRKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQF 130
D+AM+NRPH +DG+ V+ KRAVPRD + EAN + K+++V G++++ E L EYF +F
Sbjct: 77 DEAMANRPHIVDGKTVDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKF 136
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
GT+ ++ +K TG RGFAFI F+DYD VDK VL K
Sbjct: 137 GTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLK 174
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 3 PRYDDSKCTEPE-SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D S+ TE S +++++ G+ T++ L+ +F ++G ++ ++ D T + RGF
Sbjct: 99 PR-DASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFA 157
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
FIT+ + VD + + H I + K+A+ ++E+ K +
Sbjct: 158 FITFDDYDPVDKCVLLKSHQISNFRCDVKKALSKEEMAKAQ 198
>gi|324504581|gb|ADY41977.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 345
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDESL+ F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MV
Sbjct: 17 EPEQFRKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQF 130
D+AM+NRPH +DG+ V+ KRAVPRD + EAN + K+++V G++++ E L EYF +F
Sbjct: 77 DEAMANRPHIVDGKTVDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKF 136
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
GT+ ++ +K TG RGFAFI F+DYD VDK VL K
Sbjct: 137 GTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLK 174
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 3 PRYDDSKCTEPE-SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D S+ TE S +++++ G+ T++ L+ +F ++G ++ ++ D T + RGF
Sbjct: 99 PR-DASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFA 157
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
FIT+ + VD + + H I + K+A+ ++E+ K +
Sbjct: 158 FITFDDYDPVDKCVLLKSHQISNFRCDVKKALSKEEMAKAQ 198
>gi|289742401|gb|ADD19948.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 469
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 122/158 (77%), Gaps = 2/158 (1%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL TT+ESL+ F+ QWG++VDVVVM+D +TKRSRGFGFITY+++ MVD
Sbjct: 34 EHLRKLFIGGLASYTTEESLKEFYNQWGKVVDVVVMRDNMTKRSRGFGFITYTKSYMVDK 93
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPE-ANATVKKMFVGGLKD-QEEDDLREYFSQFG 131
A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +E L EYFS+FG
Sbjct: 94 AQENRPHVIDGKTVEAKRALPRPEREASENKNFSVKKLFVGGLKDNHDESCLTEYFSEFG 153
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKI 169
+ S+ ++T+K TG +RGFAF+EF+DYD VDK +L K
Sbjct: 154 KVVSIKILTDKTTGKRRGFAFVEFDDYDAVDKAILRKT 191
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL + L +F ++G++V + ++ D T + RGF F+ + + VD A
Sbjct: 127 SVKKLFVGGLKDNHDESCLTEYFSEFGKVVSIKILTDKTTGKRRGFAFVEFDDYDAVDKA 186
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGG-LKDQEED 121
+ + H+I VV+ K++V E+ K ++K +G ++DQ+ +
Sbjct: 187 ILRKTHSIKYVVVDVKKSVYNQELQK----KNIQKQNMGNKMQDQKSN 230
>gi|390470313|ref|XP_002755160.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Callithrix jacchus]
Length = 186
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 122/155 (78%), Gaps = 1/155 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K+ EE +LR+YF +
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEHTEEYNLRDYFENY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G IE++ ++ ++++G KRGFAF+ F+D+D VDK+V
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVAFDDHDTVDKLV 184
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPHKVDGRVVE 106
>gi|403309130|ref|XP_003944981.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 385
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 123/159 (77%), Gaps = 2/159 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQW + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 73 EPEQLRKLFIGGLSFETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 132
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATV-KKMFVGGLK-DQEEDDLREYFSQ 129
D AM+ RPH +DGRVVE KRAV R + +P A+ TV KK+FVGG+K D EE LR+YF Q
Sbjct: 133 DAAMNARPHKVDGRVVEPKRAVSRGDSRRPGAHLTVKKKIFVGGIKEDAEEHHLRDYFEQ 192
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+G IE + ++T++ +G KRGFAF+ F+D+D +DKIV+ K
Sbjct: 193 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQK 231
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ + L+ +FEQ+G+I + +M D + + RGF F+T+ + +D +
Sbjct: 170 KKIFVGGIKEDAEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVI 229
Query: 77 NRPHNIDGRVVETKRAVPRDEI 98
+ H ++G E ++A+ + E+
Sbjct: 230 QKYHTVNGHGCEVRKALSKQEM 251
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+ T+ ++ + T RGF F+ + +
Sbjct: 71 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYATVE 130
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 131 EVDAAMNARPHKVDGRVVE 149
>gi|358334791|dbj|GAA32408.2| heterogeneous nuclear ribonucleoprotein A1/A3 [Clonorchis sinensis]
Length = 340
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 121/166 (72%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+FIGGL +TT+ L+ F+ QWGEIVDVVVMKD ++ RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPQTTETMLKDFYSQWGEIVDVVVMKDSVSHRSRGFGFITYKEPEMVDA 73
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
A +NRPH IDG+ VE KRA+PR++ PE++ TVKK+FVG L KD +D+LR+YFS++G
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSQTPESHMTVKKLFVGALKKDVTQDELRDYFSKYGN 133
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I +VT KETG RGF F+ F+DYD VDK +L K + R +
Sbjct: 134 IVDCEIVTWKETGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRAD 179
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L T + L+ +F ++G IVD ++ T SRGFGF
Sbjct: 94 PREDSQTPESHMTVKKLFVGALKKDVTQDELRDYFSKYGNIVDCEIVTWKETGESRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMF 111
+T+ + VD A+ +PH+I + K+A+ +++I N T +K F
Sbjct: 154 VTFDDYDPVDKAILYKPHHIGSSRADVKKALSKEQI-----NETRRKRF 197
>gi|291393060|ref|XP_002713026.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG ++D VVM+DP TKRSR FGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DVAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G K+GFA + F+D+D +DKIV+ K + E
Sbjct: 129 GKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKIVIQKYHTVNGHNCE 176
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + +GF +
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYFEQYGKIEVIQIMTDRGSGKKKGFASV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + +D + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T R F F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRV 177
VD + ++ +D RV
Sbjct: 67 EVD-VAMNARPHKVDGRV 83
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+FIGG+ T+DE L+ F+ +WGEI DVVVM+DP++KRSRGFGF+TY++ + V+
Sbjct: 24 EQNRKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYADPEQVNA 83
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
AM+ RPH IDG+ VE KRA+P+D + KPEA+ +VKK+++ G+KD+ ED LREYF Q+G+
Sbjct: 84 AMAARPHLIDGKEVEPKRAMPKDVMNKPEAHISVKKVYISGIKDEHTEDMLREYFMQYGS 143
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ V++ ++ TG KRGFAF+ F+DYD VD++VL K ++ ++R +
Sbjct: 144 VQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRVVLEKSHMIDNKRCD 189
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++KV+I G+ T++ L+ +F Q+G + +V + D T + RGF F+T+ + VD
Sbjct: 116 SVKKVYISGIKDEHTEDMLREYFMQYGSVQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRV 175
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ID + + K+A+ ++E+
Sbjct: 176 VLEKSHMIDNKRCDVKKALSKEEM 199
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
PE + +K+F+GG+ + ++DLR ++S++G I V ++ + + RGF F+ + D +
Sbjct: 20 PEKDEQNRKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYADPE 79
Query: 160 VVDKIVLSKITLLLDRRVE 178
V+ + ++ L+ + VE
Sbjct: 80 QVNAAMAARPHLIDGKEVE 98
>gi|410954614|ref|XP_003983958.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Felis catus]
Length = 301
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TT+ESL++ FEQWG I D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTNESLRSHFEQWGTITDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ R H +DGRVVE KRAV R++ +P A+ TV K+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARAHKVDGRVVEPKRAVLREDSQRPGAHLTVTKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGF F+ F+D+D VDKI + K + E
Sbjct: 129 GKIEVIEIMTDQGSGKKRGFPFVTFDDHDSVDKIAIQKYHTVNGHNCE 176
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 53/95 (55%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + ++ K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVTKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKRGFPFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIAIQKYHTVNGHNCEVRKALSKQEM 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + + LR +F Q+GTI ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTNESLRSHFEQWGTITDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARAHKVDGRVVE 85
>gi|390457874|ref|XP_003732018.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTYCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +D RVVE KRAV R++ +P A+ TVK +FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDRRVVEPKRAVSREDSQRPGAHLTVKNIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++ ++ +G KRGFAF+ F+++D VDKIV+ K
Sbjct: 129 GKIEVIEIMMDRGSGKKRGFAFVTFDNHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++ +F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ VD
Sbjct: 103 TVKNIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMMDRGSGKKRGFAFVTFDNHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIG 99
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMA 187
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
PE ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PEEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTYCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRV 177
VD + ++ +DRRV
Sbjct: 67 EVDAAMNAR-PHKVDRRV 83
>gi|109109574|ref|XP_001086021.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Macaca mulatta]
Length = 267
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FI G+ + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A++ RPH +DGRVVE KRAV R++ +P A+ TVKK FVG +K D EE LR+YF Q+
Sbjct: 69 DAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDK V+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCE 176
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 50/84 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K F+G + T + L+ +F+Q+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKTFVGSIKEDTEEHHLRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
>gi|260304980|ref|NP_001159443.1| predicted gene 5803 [Mus musculus]
gi|148676975|gb|EDL08922.1| mCG112810 [Mus musculus]
Length = 320
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 122/158 (77%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL ++TTD+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFQTTDKSLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DG+VVE KRA+ R + +P A+ VKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGKVVEPKRAISRQDSQRPGAHLIVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KR FAF+ F+D+D VD IV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDTIVIQK 166
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 51/83 (61%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GG+ T + L+ +FEQ+G+I + +M D + + R F F+T+ + VD +
Sbjct: 104 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDTIV 163
Query: 76 SNRPHNIDGRVVETKRAVPRDEI 98
+ HN++G E ++A+ + E+
Sbjct: 164 IQKYHNVNGHNCEVRKALSKQEM 186
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 101 PEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL Q D LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFQTTDKSLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSK 168
VD + ++
Sbjct: 67 EVDAAMNAR 75
>gi|297269736|ref|XP_002799946.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 273
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FI G+ + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A++ RPH +DGRVVE KRAV R++ +P A+ TVKK FVG +K D EE LR+YF Q+
Sbjct: 69 DAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 50/85 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K F+G + T + L+ +F+Q+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKTFVGSIKEDTEEHHLRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIG 99
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMA 187
>gi|109109572|ref|XP_001086138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Macaca mulatta]
Length = 320
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FI G+ + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A++ RPH +DGRVVE KRAV R++ +P A+ TVKK FVG +K D EE LR+YF Q+
Sbjct: 69 DAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDK V+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCE 176
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 50/84 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K F+G + T + L+ +F+Q+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKTFVGSIKEDTEEHHLRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
>gi|392334561|ref|XP_003753212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Rattus
norvegicus]
Length = 356
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 ELEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSLKPGAHLTVKKIFVGGIKEDTEEYYLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV T+
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVQKYHTI 168
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + VM+D + + RGF F+T+ + V D
Sbjct: 102 TVKKIFVGGIKEDTEEYYLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DK 160
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 161 IVQKYHTINGHNCEVKKALSKQEM 184
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKELEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|296485784|tpg|DAA27899.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 341
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E +RK+FIGGL ++TT+ESL+ +++QWGE+ D VV++D ++RSRG GF+T+S V
Sbjct: 16 EAEQIRKLFIGGLSFQTTEESLRKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSVTEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRV+E +RA+PR+ G+ A+ T+KK+FVGG+K D EE LREYF ++
Sbjct: 76 DAAMAARPHSIDGRVLEPRRAIPREASGQRGAHWTLKKLFVGGIKEDTEEHHLREYFEKY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+DYD VDKIVL K + E
Sbjct: 136 GKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKIVLQKYHAINGHHAE 183
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 61/107 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +L+K+F+GG+ T + L+ +FE++G+I + ++ D + R RGFGF
Sbjct: 98 PREASGQRGAHWTLKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGRKRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKK 109
+T+ + VD + + H I+G E ++A+ E+ + + + + K+
Sbjct: 158 VTFDDYDPVDKIVLQKYHAINGHHAEVRKALSIWEMQQVQGSRSRKR 204
>gi|351694477|gb|EHA97395.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 282
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 128/182 (70%), Gaps = 12/182 (6%)
Query: 2 KPRYDDSKC-----------TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMK 50
+P+ D +C EPE LRK+FIGGL + TTD+SL+ FE+WG + + VM+
Sbjct: 9 RPQPDSGRCRRHRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTNCAVMR 68
Query: 51 DPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
DP TKRSRGFGF+TYS + VD AM RPH +DGRVVE KRAV R++ KP A+ TVKK+
Sbjct: 69 DPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKI 128
Query: 111 FVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKI 169
FVGG+K D EE +LR+YF ++G E++ ++ ++++G KRGFAF F+D+D VDKIV
Sbjct: 129 FVGGIKEDTEEYNLRDYFEKYGKTETMEVMEDRQSGKKRGFAFATFDDHDTVDKIVQKYH 188
Query: 170 TL 171
T+
Sbjct: 189 TI 190
>gi|351697839|gb|EHB00758.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 236
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E LRK+FI GL + TTDESL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 ESEQLRKLFIQGLSFETTDESLRSCFEQWGMLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ R H + GRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q
Sbjct: 69 DAAMNARLHKVGGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQC 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIITDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ G+I + ++ D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQCGKIEVIEIITDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALLKQEMA 187
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ + ++K+F+ GL + D+ LR F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKESEQLRKLFIQGLSFETTDESLRSCFEQWGMLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + +++ + R VE
Sbjct: 67 EVDAAMNARLHKVGGRVVE 85
>gi|410047791|ref|XP_003954550.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2 [Pan troglodytes]
Length = 320
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 122/168 (72%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGG+ + T DESL++ FEQWG + D +VM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGVSFETIDESLRSHFEQWGMLTDCLVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNTRPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
IE + ++T+ +G KRGFAF+ F+D+D V KIV+ K + E
Sbjct: 129 EKIEVIEIMTDXGSGKKRGFAFVTFDDHDSVXKIVIQKYHTVKGHNCE 176
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+ +I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYEKIEVIEIMTDXGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + V + + H + G E ++A+ + E+
Sbjct: 152 TFDDHDSVXKIVIQKYHTVKGHNCEVRKALSKQEM 186
>gi|29841163|gb|AAP06176.1| SJCHGC06206 protein [Schistosoma japonicum]
gi|226473310|emb|CAX71341.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473312|emb|CAX71342.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473314|emb|CAX71343.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473318|emb|CAX71345.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 313
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+FIGGL TT+ L+ F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
A +NRPH IDG+ VE KRA+PR++ PE++ TV K+FVGGL KD ++LREYFS++G
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I +V KE+G RGF F+ F+DYD VDK +L K + R +
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRAD 179
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D + ++ K+F+GGL T E L+ +F ++G I + V+ + SRGFGF
Sbjct: 94 PREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD A+ +PH+I + K+A+ +++I
Sbjct: 154 VTFDDYDPVDKAILYKPHHIGSSRADVKKALSKEQI 189
>gi|256080846|ref|XP_002576687.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 315
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+FIGGL TT+ L+ F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
A +NRPH IDG+ VE KRA+PR++ PE++ TV K+FVGGL KD ++LREYFS++G
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I +V KE+G RGF F+ F+DYD VDK +L K + R +
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRAD 179
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D + ++ K+F+GGL T E L+ +F ++G I + V+ + SRGFGF
Sbjct: 94 PREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD A+ +PH+I + K+A+ +++I
Sbjct: 154 VTFDDYDPVDKAILYKPHHIGSSRADVKKALSKEQI 189
>gi|403287876|ref|XP_003935149.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 356
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 122/168 (72%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TT +SL++ FEQWG + VVM+ P TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTHKSLRSHFEQWGTLTGCVVMRHPNTKHSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH ++GRVVE KRAV R++ +P A+ TVKK+FVG +K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVNGRVVEPKRAVSREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G K+GFAF+ F+D+D VDKI++ K + E
Sbjct: 129 GKIEVIEIMTDRSSGKKKGFAFVTFDDHDSVDKIIIKKYHTVNGHNCE 176
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+G + T + L+ +FEQ+G+I + +M D + + +GF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQYGKIEVIEIMTDRSSGKKKGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIIIKKYHTVNGHNCEVRKALSKQEM 186
>gi|353232562|emb|CCD79917.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 315
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+FIGGL TT+ L+ F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
A +NRPH IDG+ VE KRA+PR++ PE++ TV K+FVGGL KD ++LREYFS++G
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I +V KE+G RGF F+ F+DYD VDK +L K + R +
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRAD 179
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D + ++ K+F+GGL T E L+ +F ++G I + V+ + SRGFGF
Sbjct: 94 PREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD A+ +PH+I + K+A+ +++I
Sbjct: 154 VTFDDYDPVDKAILYKPHHIGSSRADVKKALSKEQI 189
>gi|226473316|emb|CAX71344.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 236
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 114/156 (73%), Gaps = 1/156 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+FIGGL TT+ L+ F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
A +NRPH IDG+ VE KRA+PR++ PE++ TV K+FVGGL KD ++LREYFS++G
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
I +V KE+G RGF F+ F+DYD VDK +L K
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYK 169
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D + ++ K+F+GGL T E L+ +F ++G I + V+ + SRGFGF
Sbjct: 94 PREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD A+ +PH+I + K+A+ +++I
Sbjct: 154 VTFDDYDPVDKAILYKPHHIGSSRADVKKALSKEQI 189
>gi|359073189|ref|XP_003587038.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 122/168 (72%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH + E KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DVAMNARPHKGTEELWELKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 186
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>gi|410036043|ref|XP_003949991.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan troglodytes]
Length = 320
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 121/168 (72%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQ G + D VVM+DP TK S GFGF+TY+ K V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKCSTGFGFVTYATVKEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+ AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK FVGG+K D EE LR+YF Q+
Sbjct: 69 EAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKTFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G E + ++T++ +G KRGFAF+ F+D+D VDK V+ K + E
Sbjct: 129 GKTEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCE 176
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 50/84 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K F+GG+ T + L+ +FEQ+G+ + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKTFVGGIKEDTEEHHLRDYFEQYGKTEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
>gi|195574232|ref|XP_002105093.1| GD18114 [Drosophila simulans]
gi|194201020|gb|EDX14596.1| GD18114 [Drosophila simulans]
Length = 472
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R +D C E E LRK+FIGGL TT+E+L+ F+ QWG +VDVVVM+D TKRSRGFGFI
Sbjct: 20 REEDDIC-ELEHLRKLFIGGLAPYTTEENLKVFYGQWGRVVDVVVMRDAATKRSRGFGFI 78
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +E+
Sbjct: 79 TYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEEC 138
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD VDK +L K
Sbjct: 139 LREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL +E L+ +F Q+G +V V ++ D T + RGF F+ + + VD A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+
Sbjct: 31 LRKLFIGGLAPYTTEENLKVFYGQWGRVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 91 ENRPHIIDGKTVE 103
>gi|296473573|tpg|DAA15688.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 122/168 (72%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TT+ESL++ FEQWG + D V+M+DP TK SRGFG +TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVLMRDPNTKHSRGFGLVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV ++ +P A+ TVKK+FVGG+K D EE R+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSGEDSQRPGAHLTVKKIFVGGIKEDTEEHHXRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 129 RKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 50/84 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + + +FEQ+ +I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHXRDYFEQYRKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
>gi|402894543|ref|XP_003910414.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402894545|ref|XP_003910415.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 122/168 (72%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FI G+ + TTDESL++ FEQW + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A++ RPH +DGRVVE KRAV R++ +P A+ TVKK FVG +K D EE LR+YF Q+
Sbjct: 69 DAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDMEEHHLRDYFDQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDK V+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCE 176
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 49/84 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K F+G + + L+ +F+Q+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKTFVGSIKEDMEEHHLRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
>gi|195349782|ref|XP_002041421.1| GM10160 [Drosophila sechellia]
gi|194123116|gb|EDW45159.1| GM10160 [Drosophila sechellia]
Length = 472
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R +D C E E LRK+FIGGL TT+E+L+ F+ QWG +VDVVVM+D TKRSRGFGFI
Sbjct: 20 REEDDIC-ELEHLRKLFIGGLAPYTTEENLKVFYGQWGRVVDVVVMRDAATKRSRGFGFI 78
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDD 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +E+
Sbjct: 79 TYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEEC 138
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD VDK +L K
Sbjct: 139 LREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL +E L+ +F Q+G +V V ++ D T + RGF F+ + + VD A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+
Sbjct: 31 LRKLFIGGLAPYTTEENLKVFYGQWGRVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 91 ENRPHIIDGKTVE 103
>gi|324508919|gb|ADY43760.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 378
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 122/168 (72%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDE+L+ F+ +WGE+VD VVM+DP TKRSRGFGF++YS+ V
Sbjct: 16 EPEQFRKMFIGGLTSTTTDETLREFYSKWGELVDCVVMRDPTTKRSRGFGFVSYSKQSEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D+AM+NRPH IDG+ V+ KRAVPR++ + EAN + K+++V G++ D E +++F ++
Sbjct: 76 DEAMANRPHVIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREDHTEQMFKDHFGKY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I ++ +K TG RGFAF+ F+DYD VDK +L K ++ + R +
Sbjct: 136 GNIIKCEIIADKATGKPRGFAFVTFDDYDAVDKCILIKSHMINNARCD 183
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S +++++ G+ T++ + F ++G I+ ++ D T + RGF F
Sbjct: 98 PREQSQRSEANISSKRLYVSGVREDHTEQMFKDHFGKYGNIIKCEIIADKATGKPRGFAF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
+T+ + VD + + H I+ + K+A+ ++E+ K +
Sbjct: 158 VTFDDYDAVDKCILIKSHMINNARCDVKKALSKEEMAKAQ 197
>gi|242018680|ref|XP_002429802.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212514814|gb|EEB17064.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 486
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 125/168 (74%), Gaps = 3/168 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGLDY TTD+ L+ F+E+WG +VDVVVMKDP ++RSRGFGFITYS+A MV
Sbjct: 23 EPEQLRKMFIGGLDYSTTDDGLKEFYEKWGMVVDVVVMKDPKSRRSRGFGFITYSKASMV 82
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQF 130
DDAM+NRPH IDGR VE KRAVPRD + EAN V+K+F+GG+ K +DDL EYF ++
Sbjct: 83 DDAMNNRPHIIDGRQVEPKRAVPRDLCSRSEAN--VRKLFIGGIGKAVTKDDLEEYFQKY 140
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G + +V K+TG RGF F+E+ D D DK++L + + R VE
Sbjct: 141 GRLTDCAIVVTKDTGEPRGFGFVEYEDVDSADKVILIRDHEIKGRHVE 188
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 10 CTEPES-LRKVFIGGLDYRTTDESLQAFFEQWGEIVD--VVVMKDPITKRSRGFGFITYS 66
C+ E+ +RK+FIGG+ T + L+ +F+++G + D +VV KD T RGFGF+ Y
Sbjct: 109 CSRSEANVRKLFIGGIGKAVTKDDLEEYFQKYGRLTDCAIVVTKD--TGEPRGFGFVEYE 166
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
+ D + R H I GR VE K+AV RDEI K
Sbjct: 167 DVDSADKVILIRDHEIKGRHVEIKKAVARDEISK 200
>gi|350580575|ref|XP_003480852.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 349
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 123/166 (74%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+FIGGL RTT++SL+ +++QWG++ D VV++DP KRSRGFGF+T+S VD
Sbjct: 18 EQFHKLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSVAEVDA 77
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGT 132
AM+ RPH++DG+VV+ KRAV R+E KP A+ VKK+FVGG+K D EE LR+YF ++G
Sbjct: 78 AMAARPHSVDGKVVDPKRAVAREESEKPGAHLAVKKLFVGGIKEDTEEHHLRDYFEKYGK 137
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 138 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHHAE 183
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 AVKKLFVGGIKEDTEEHHLRDYFEKYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E +A+ R E+
Sbjct: 170 VLQKYHTINGHHAEVGKALSRQEM 193
>gi|444509175|gb|ELV09196.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 346
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E LRK+FIGGL + TTDESL++ FEQ G + D VVM+DP TK SRGFGF+T + + V
Sbjct: 9 ELEQLRKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKHSRGFGFVTSATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TV+K+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVEKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFKTFDDHDSVDKIVIQK 166
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 51/89 (57%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
++ K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F T+ + VD
Sbjct: 103 TVEKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFKTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEA 103
+ + H ++G E ++A+ + E+ +
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASS 191
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q GT+ ++ + T RGF F+ +
Sbjct: 7 PKELEQLRKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKHSRGFGFVTSATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|297676076|ref|XP_002815972.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Pongo abelii]
Length = 320
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ RK+FIGGL + TTDESL++ EQWG + D VM+DP TK SRGFGF+ Y+ + V
Sbjct: 9 EPKQQRKLFIGGLSFETTDESLRSHSEQWGMLTDCAVMRDPNTKHSRGFGFVIYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE RAV R++ +P+A+ TVKK+FVGG+K D EE LR YF Q+
Sbjct: 69 DTAMNARPHKVDGRVVEPNRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRHYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D +DK V+ K + E
Sbjct: 129 GKIEVIEIMTDQGSGKKRGFAFVTFDDHDSLDKTVIQKYHTVNGHNCE 176
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + +D
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRHYFEQYGKIEVIEIMTDQGSGKKRGFAFVTFDDHDSLDKT 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSNQEM 186
>gi|257215987|emb|CAX83143.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215989|emb|CAX83144.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215991|emb|CAX83145.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215993|emb|CAX83146.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215995|emb|CAX83147.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215997|emb|CAX83148.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215999|emb|CAX83149.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216001|emb|CAX83150.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216003|emb|CAX83151.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216005|emb|CAX83152.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 168
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 113/154 (73%), Gaps = 1/154 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+FIGGL TT+ L+ F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
A +NRPH IDG+ VE KRA+PR++ PE++ TV K+FVGGL KD ++LREYFS++G
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
I +V KE+G RGF F+ F+DYD VDK +L
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAIL 167
>gi|312083050|ref|XP_003143699.1| heterogeneous ribonuclear particle protein [Loa loa]
Length = 349
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDE+L+ F+ +WG +VD VVM+DP TKRSRGFGF+++S+ V
Sbjct: 21 EPEQYRKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEV 80
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDL-REYFSQF 130
D AM+NRPH IDG+ V+ KRAVPR++ + EAN + K+++V G++++ +D+ +E+F ++
Sbjct: 81 DAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKY 140
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I ++ +K TG RGFAFI F+DYD VDK VL K ++ + R +
Sbjct: 141 GNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCD 188
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S +++++ G+ T++ + F ++G I+ ++ D T + RGF F
Sbjct: 103 PREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAF 162
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
IT+ + VD + + H I+ + K+A+ ++E+ K
Sbjct: 163 ITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAK 200
>gi|393911994|gb|EFO20372.2| heterogeneous ribonuclear particle protein [Loa loa]
Length = 344
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDE+L+ F+ +WG +VD VVM+DP TKRSRGFGF+++S+ V
Sbjct: 16 EPEQYRKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDL-REYFSQF 130
D AM+NRPH IDG+ V+ KRAVPR++ + EAN + K+++V G++++ +D+ +E+F ++
Sbjct: 76 DAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I ++ +K TG RGFAFI F+DYD VDK VL K ++ + R +
Sbjct: 136 GNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCD 183
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S +++++ G+ T++ + F ++G I+ ++ D T + RGF F
Sbjct: 98 PREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
IT+ + VD + + H I+ + K+A+ ++E+ K
Sbjct: 158 ITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAK 195
>gi|355558052|gb|EHH14832.1| hypothetical protein EGK_00819, partial [Macaca mulatta]
Length = 278
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 124/175 (70%), Gaps = 4/175 (2%)
Query: 8 SKCTEPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
SK P+ L RK+FIGGL + TTDESL++ EQWG ++D VV++DP TKRSRGFGF+T
Sbjct: 2 SKSESPKELEQRRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVT 61
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
Y+ + VD M+ RPH +DGR VETKRAV ++ +P + TVKK+FVGG+K D EE L
Sbjct: 62 YATVQEVDAVMNARPHKVDGRAVETKRAVSGEDSQRPGGHLTVKKVFVGGIKEDTEEHHL 121
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+YF QFG +E + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 122 IDYFQQFGKMEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 176
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++KVF+GG+ T + L +F+Q+G++ + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEM 186
>gi|393911995|gb|EJD76539.1| heterogeneous ribonuclear particle protein, variant [Loa loa]
Length = 317
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDE+L+ F+ +WG +VD VVM+DP TKRSRGFGF+++S+ V
Sbjct: 16 EPEQYRKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDL-REYFSQF 130
D AM+NRPH IDG+ V+ KRAVPR++ + EAN + K+++V G++++ +D+ +E+F ++
Sbjct: 76 DAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I ++ +K TG RGFAFI F+DYD VDK VL K ++ + R +
Sbjct: 136 GNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCD 183
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S +++++ G+ T++ + F ++G I+ ++ D T + RGF F
Sbjct: 98 PREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
IT+ + VD + + H I+ + K+A+ ++E+ K
Sbjct: 158 ITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAK 195
>gi|440912092|gb|ELR61691.1| hypothetical protein M91_00743 [Bos grunniens mutus]
Length = 266
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 122/168 (72%), Gaps = 2/168 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E L K+FIGGL + TTDESL++ FEQWG + D VVM DP TKRSRGFGF+TY+ + V
Sbjct: 9 ELEQLPKLFIGGLSFETTDESLRSHFEQWGTLTDCVVM-DPNTKRSRGFGFVTYATVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RP +DGRVV KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 68 DAAMNARPQKMDGRVVAPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 128 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 175
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 91 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 151 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 185
>gi|170586940|ref|XP_001898237.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594632|gb|EDP33216.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 314
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDE+L+ F+ +WG +VD VVM+DP TKRSRGFGF+++S+ V
Sbjct: 24 EPEQYRKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEV 83
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDL-REYFSQF 130
D AM+NRPH IDG+ V+ KRAVPR++ + EAN + K+++V G++++ +D+ +E+F ++
Sbjct: 84 DAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKY 143
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I ++ +K TG RGFAFI F+DYD VDK VL K ++ + R +
Sbjct: 144 GNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCD 191
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S +++++ G+ T++ + F ++G I+ ++ D T + RGF F
Sbjct: 106 PREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAF 165
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
IT+ + VD + + H I+ + K+A+ ++E+ K
Sbjct: 166 ITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAK 203
>gi|399758|gb|AAB27595.1| FBRNP [Homo sapiens]
Length = 269
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D +VM+DP TKRSRGFGF+TYS V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCLVMRDPQTKRSRGFGFVTYSCVTEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A+ RP +DGRVVE KRAV R++ KP A+ TVKK+FVG +K D EE +LR+YF ++
Sbjct: 90 DAAIGARPFKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGSIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFA + F+D+D VDKIV+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKIVVQKYHTINGHNCE 197
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+G + T + +L+ +FE++G+I + VM+D + + RGF +T+ + VD
Sbjct: 124 TVKKIFVGSIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPR 95
+ + H I+G E K+A+ +
Sbjct: 184 VVQKYHTINGHNCEVKKALAK 204
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCLVMRDPQTKRSRGFGFVTYSCVT 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAIGARPFKVDGRVVE 106
>gi|148664549|gb|EDK96965.1| mCG123153 [Mus musculus]
Length = 153
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 112/143 (78%), Gaps = 1/143 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFI 153
G IE + ++T++ +G KRGFAF
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFC 151
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|49617279|gb|AAT67404.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
Length = 152
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Query: 23 GLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNI 82
GL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + VD AM+ RPH +
Sbjct: 1 GLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKV 60
Query: 83 DGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTN 141
DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T+
Sbjct: 61 DGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTD 120
Query: 142 KETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 121 RGSGKKRGFAFVTFDDHDSVDKIVIQK 147
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 73 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 132
Query: 64 TYSEAKMVDDAMSNRPHNID 83
T+ + VD + + H ++
Sbjct: 133 TFDDHDSVDKIVIQKYHTVN 152
>gi|226472210|emb|CAX77141.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 128/179 (71%), Gaps = 6/179 (3%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
M+P + DSK + +K+FIGGL +T + SL+ ++ QWGEI+DVVVMKDP +++SRGF
Sbjct: 2 MRP-FTDSKA---DQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGF 57
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQE 119
GF+TY +A VD A +NRPH +DG+ V+TKRA+PR+E PE +A VKK+FVG L KD
Sbjct: 58 GFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPREET-SPEVHAAVKKIFVGALKKDVT 116
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+DL +YFSQFGT+ +V KET RGFAF+ F+D D VDK++L++ + D + +
Sbjct: 117 NEDLSDYFSQFGTVTDAQIVIAKETNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKAD 175
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 11 TEPE---SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
T PE +++K+F+G L T+E L +F Q+G + D ++ T SRGF F+T+ +
Sbjct: 95 TSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKETNTSRGFAFVTFDD 154
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN-ATVKKMFVGG 114
VD + RPH I + ++A+ R+E+ K + A V+ + GG
Sbjct: 155 TDAVDKVILARPHTIKDSKADVRKALSREEMNKMRSKPAPVRSDYNGG 202
>gi|402587322|gb|EJW81257.1| heterogeneous nuclear ribonucleoprotein A1, partial [Wuchereria
bancrofti]
Length = 333
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 122/181 (67%), Gaps = 14/181 (7%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK-- 69
EPE RK+FIGGL TTDE+L+ F+ QWGE+VD +VM+DP TKRSRGFGF+++S+
Sbjct: 5 EPEQFRKMFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGFVSFSKQSEA 64
Query: 70 -----------MVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
VD AM+ RPH IDG+ V+ KRAVPRD+ + EAN + K+++V G++++
Sbjct: 65 SFLTLEIQIFLQVDAAMAARPHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREE 124
Query: 119 EEDDLRE-YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRV 177
+ + E YFSQFG + V ++ +K TG RGFAFI F+DYD VDK VL K + + R
Sbjct: 125 HTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKCVLQKSHQIHNYRC 184
Query: 178 E 178
+
Sbjct: 185 D 185
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 55/100 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR ++ S +++++ G+ T++ + +F Q+G+++ V ++ D T + RGF F
Sbjct: 100 PRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAF 159
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
I++ + VD + + H I + K+A+ ++E+ K +
Sbjct: 160 ISFDDYDPVDKCVLQKSHQIHNYRCDVKKALSKEEMAKAQ 199
>gi|109111364|ref|XP_001106881.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
Length = 320
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 121/168 (72%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + T DESL++ FEQW ++D VVM+DP K RGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETPDESLRSHFEQWRTLMDCVVMRDPNIKCCRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGR VE KRAV R++ +P A++TVKK+FVGG+K D EE LR+YF Q
Sbjct: 69 DAAMNARPHKVDGRGVEPKRAVSREDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYFEQR 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G K+GFAF+ F+D+D VDK ++ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKTIIQKYHTVNGHNCE 176
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++KVF+GG+ + L+ +FEQ G+I + +M D + + +GF F+
Sbjct: 92 REDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYFEQRGKIEVIEIMTDRGSGKKKGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A + E+
Sbjct: 152 TFDDHDSVDKTIIQKYHTVNGHNCEVRKAPSKQEM 186
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+ T+ ++ + RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETPDESLRSHFEQWRTLMDCVVMRDPNIKCCRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRGVE 85
>gi|444725879|gb|ELW66430.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 191
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 118/158 (74%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E L K+FI GL + TTDESL++ FEQWG + D +VM+DP TK SRGFGF+TY+ + V
Sbjct: 17 ELEQLWKLFIRGLSFETTDESLRSHFEQWGTLTDCMVMRDPNTKHSRGFGFVTYATVEEV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D M RPH +DGRVVE KR + R++ +P A+ T+KK+FVGG+K D EE LR+YF Q+
Sbjct: 77 DATMKARPHEVDGRVVEPKRVISREDSQRPGAHLTMKKIFVGGIKEDTEEHHLRDYFEQY 136
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ ++D+D VDKIV+ K
Sbjct: 137 GKIEVIKIMTDRGSGKKRGFAFVIYDDHDSVDKIVIQK 174
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+ Y + VD
Sbjct: 111 TMKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIKIMTDRGSGKKRGFAFVIYDDHDSVDKI 170
Query: 75 MSNRPHNIDGRVVETKRAVPR 95
+ + H ++G E ++A+ +
Sbjct: 171 VIQKYHTVNGHNCEVRKALSK 191
>gi|198420439|ref|XP_002131647.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 442
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 118/162 (72%), Gaps = 1/162 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL + TT+ESL A+F ++GE+ D VVM DP TK+SRGFGF+T+ KMV
Sbjct: 16 EPEQQRKLFIGGLSFDTTNESLSAYFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
D MS RPH +DGR V KRAV R++ KP A+ATVKK+FVGG+KD E L+++F +F
Sbjct: 76 DAVMSERPHKLDGRTVTPKRAVSREDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKF 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
G +E V ++ ++ET KRGFAF+ F D+D VDKIV K +
Sbjct: 136 GIVELVEVMEDRETRKKRGFAFVTFADHDPVDKIVSQKYHTI 177
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 61/97 (62%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ TT++ L+ F ++G + V VM+D T++ RGF F+
Sbjct: 99 REDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETRKKRGFAFV 158
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
T+++ VD +S + H I+G E ++A+P++E+ K
Sbjct: 159 TFADHDPVDKIVSQKYHTINGHNCEVRKALPKNELDK 195
>gi|301508557|gb|ADK78240.1| heterogeneous nuclear ribonucleoprotein A2 [Schmidtea mediterranea]
Length = 331
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 119/166 (71%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+FIGGL +T + L+ ++EQWGE+VD VVMKD T RSRGFGF+TY + +MVD+
Sbjct: 14 EQFRKLFIGGLTPQTDEIRLRKYYEQWGELVDFVVMKDNKTGRSRGFGFVTYRDPEMVDE 73
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
A +NRPH +DG++VE KRA+PR++ PE++ TV K+FVGGL KD + LR YF+ +GT
Sbjct: 74 AQNNRPHEVDGKIVEAKRAMPREDSNTPESHMTVNKLFVGGLKKDVTTEHLRHYFTSYGT 133
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I +VT K++G RGF F+ F+DYD VDK +L K + RV+
Sbjct: 134 ITDCEIVTWKDSGESRGFGFVTFDDYDPVDKAILYKPHQIGSSRVD 179
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D + ++ K+F+GGL T E L+ +F +G I D ++ + SRGFGF
Sbjct: 94 PREDSNTPESHMTVNKLFVGGLKKDVTTEHLRHYFTSYGTITDCEIVTWKDSGESRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD A+ +PH I V+ K+A+ +DE+
Sbjct: 154 VTFDDYDPVDKAILYKPHQIGSSRVDVKKALSKDEM 189
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 120/163 (73%), Gaps = 2/163 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL+ +T +ESL++++ QWGEI DVVVMKDP + +SRGFGF+T+ EA VD A +
Sbjct: 13 KKLFVGGLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAASVDKAQA 72
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIES 135
NRPH +DG+ V++KRA+PR+E PE +A VKK+FVGGL KD DDL EYF Q+GT+
Sbjct: 73 NRPHKLDGKEVDSKRAMPREET-SPEVHAAVKKIFVGGLKKDVTNDDLAEYFGQYGTVTD 131
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+V K+T RGFAF+ F+D D VDK++L++ + + +
Sbjct: 132 AQIVMAKDTNTSRGFAFVTFDDTDSVDKVILARPHTINGHKAD 174
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 11 TEPE---SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
T PE +++K+F+GGL T++ L +F Q+G + D ++ T SRGF F+T+ +
Sbjct: 94 TSPEVHAAVKKIFVGGLKKDVTNDDLAEYFGQYGTVTDAQIVMAKDTNTSRGFAFVTFDD 153
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
VD + RPH I+G + ++A+ R+E+ K
Sbjct: 154 TDSVDKVILARPHTINGHKADVRKALSREEMNK 186
>gi|410971274|ref|XP_003992095.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Felis catus]
Length = 325
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 116/167 (69%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L +F+GGL + TT+ESL++ FEQW + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLWXIFMGGLSFETTNESLRSHFEQWATLTDCVVMRDPNTKHSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AMS RPH +DGRVV +RAV R + +P A+ VKK+FVGG+ D +E LR+YF +G
Sbjct: 69 DAAMSARPHKVDGRVVVPQRAVSRGDSQRPGAHLAVKKVFVGGIXDTKEHHLRDYFEHYG 128
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+E + ++T+ +G KRGF F+ F+D+D V KIV+ K + D E
Sbjct: 129 KMEVIEIMTDXGSGRKRGFTFVTFDDHDSVHKIVIQKYHTVNDHNCE 175
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++KVF+GG+ T + L+ +FE +G++ + +M D + R RGF F+
Sbjct: 92 RGDSQRPGAHLAVKKVFVGGIX-DTKEHHLRDYFEHYGKMEVIEIMTDXGSGRKRGFTFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
T+ + V + + H ++ E ++A+P+ E
Sbjct: 151 TFDDHDSVHKIVIQKYHTVNDHNCEVRKALPKQE 184
>gi|226472218|emb|CAX77145.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 307
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 128/179 (71%), Gaps = 6/179 (3%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
M+P + DSK + +K+FIGGL +T + SL+ ++ QWGEI+DVVVMKDP +++SRGF
Sbjct: 2 MRP-FTDSKA---DQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGF 57
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQE 119
GF+TY +A VD A +NRPH +DG+ V+TKRA+PR+E PE +A VKK+FVG L KD
Sbjct: 58 GFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPREET-SPEVHAAVKKIFVGALKKDVT 116
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+DL +YFSQFGT+ +V K+T RGFAF+ F+D D VDK++L++ + D + +
Sbjct: 117 NEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKAD 175
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 11 TEPE---SLRKVFIGGLDYRTTDESLQAFFEQWGEIVD--VVVMKDPITKRSRGFGFITY 65
T PE +++K+F+G L T+E L +F Q+G + D +V+ KD T SRGF F+T+
Sbjct: 95 TSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKD--TNTSRGFAFVTF 152
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN-ATVKKMFVGG 114
+ VD + RPH I + ++A+ R+E+ K + A V+ + GG
Sbjct: 153 DDTDAVDKVILARPHTIKDSKADVRKALSREEMNKMRSKPAPVRSDYNGG 202
>gi|296207810|ref|XP_002750803.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 319
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 119/168 (70%), Gaps = 2/168 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + T +ESL++ FEQW + D VVM+DP TK SRGFGF Y+ + V
Sbjct: 9 EPEQLRKLFIGGLSFET-NESLRSHFEQWEMLTDCVVMRDPNTKHSRGFGFFMYATVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +D RVVE KRAV R++ +P A TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 68 DAAMNARPHKVDRRVVEPKRAVSREDSQRPGAYLTVKKIFVGGIKEDTEEHHLRDYFEQY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGF F+ FND+D VDKIV+ K + E
Sbjct: 128 GQIEVIEIMTDRGSGKKRGFTFVTFNDHDSVDKIVIQKYHTVNGHNCE 175
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+++ VD
Sbjct: 102 TVKKIFVGGIKEDTEEHHLRDYFEQYGQIEVIEIMTDRGSGKKRGFTFVTFNDHDSVDKI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 162 VIQKYHTVNGHNCEVRKALSKQEM 185
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 160
P+ ++K+F+GGL + + LR +F Q+ + ++ + T RGF F + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETNESLRSHFEQWEMLTDCVVMRDPNTKHSRGFGFFMYATVEE 66
Query: 161 VDKIVLSKITLLLDRRV 177
VD + ++ +DRRV
Sbjct: 67 VDAAMNAR-PHKVDRRV 82
>gi|56758132|gb|AAW27206.1| SJCHGC06052 protein [Schistosoma japonicum]
gi|226472196|emb|CAX77134.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472198|emb|CAX77135.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472200|emb|CAX77136.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472202|emb|CAX77137.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472206|emb|CAX77139.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472208|emb|CAX77140.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472212|emb|CAX77142.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472214|emb|CAX77143.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472216|emb|CAX77144.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472220|emb|CAX77146.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472222|emb|CAX77147.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226473414|emb|CAX71392.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 128/179 (71%), Gaps = 6/179 (3%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
M+P + DSK + +K+FIGGL +T + SL+ ++ QWGEI+DVVVMKDP +++SRGF
Sbjct: 2 MRP-FTDSKA---DQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGF 57
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQE 119
GF+TY +A VD A +NRPH +DG+ V+TKRA+PR+E PE +A VKK+FVG L KD
Sbjct: 58 GFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPREET-SPEVHAAVKKIFVGALKKDVT 116
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+DL +YFSQFGT+ +V K+T RGFAF+ F+D D VDK++L++ + D + +
Sbjct: 117 NEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKAD 175
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 11 TEPE---SLRKVFIGGLDYRTTDESLQAFFEQWGEIVD--VVVMKDPITKRSRGFGFITY 65
T PE +++K+F+G L T+E L +F Q+G + D +V+ KD T SRGF F+T+
Sbjct: 95 TSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKD--TNTSRGFAFVTF 152
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN-ATVKKMFVGG 114
+ VD + RPH I + ++A+ R+E+ K + A V+ + GG
Sbjct: 153 DDTDAVDKVILARPHTIKDSKADVRKALSREEMNKMRSKPAPVRSDYNGG 202
>gi|402860565|ref|XP_003894696.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 321
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 118/158 (74%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQ G + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKIFIGGLSFETTDESLRSHFEQRGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RP +DGR V+ KRAV R++ + A+ TVKK FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPRKVDGRTVKPKRAVSREDSQRSGAHLTVKKKFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KR FAFI F+++D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRDFAFITFDNHDSVDKTVIQK 166
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K F+GG+ T + L+ +FEQ+G+I + +M D + + R F FI
Sbjct: 92 REDSQRSGAHLTVKKKFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFI 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDNHDSVDKTVIQKYHTVNGHNYEARKALSKQEM 186
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKIFIGGLSFETTDESLRSHFEQRGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSK 168
VD + ++
Sbjct: 67 EVDAAMNAR 75
>gi|355753305|gb|EHH57351.1| hypothetical protein EGM_06957 [Macaca fascicularis]
Length = 320
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + T DESL++ FEQW ++D VVM+DP K RGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETPDESLRSHFEQWRTLMDCVVMRDPNIKCCRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGR VE KRAV R++ +P A++TVKK+FVGG+K D EE LR+YF Q
Sbjct: 69 DAAMNARPHKVDGRGVEPKRAVSREDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYFEQR 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G K+GFAF+ F+D D VDK ++ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKKGFAFVTFDDNDSVDKTIIQKYHTVNGHNCE 176
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++KVF+GG+ + L+ +FEQ G+I + +M D + + +GF F+
Sbjct: 92 REDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYFEQRGKIEVIEIMTDRGSGKKKGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDNDSVDKTIIQKYHTVNGHNCEVRKALSKQEM 186
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+ T+ ++ + RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETPDESLRSHFEQWRTLMDCVVMRDPNIKCCRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRGVE 85
>gi|393911996|gb|EJD76540.1| RNA recognition domain-containing protein [Loa loa]
Length = 309
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL TTDE+L+ F+ QWGE+VD +VM+DP TKRSRGFGF+++S+ VD AM+ R
Sbjct: 1 MFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGFVSFSKQSEVDAAMAAR 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLRE-YFSQFGTIESVN 137
PH IDG+ V+ KRAVPRD+ + EAN + K+++V G++++ + + E YFSQFG + V
Sbjct: 61 PHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVE 120
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K TG RGFAFI F+DYD VDK VL K + + R +
Sbjct: 121 IIADKNTGKPRGFAFISFDDYDPVDKCVLQKSHQIHNYRCD 161
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 55/100 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR ++ S +++++ G+ T++ + +F Q+G+++ V ++ D T + RGF F
Sbjct: 76 PRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAF 135
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
I++ + VD + + H I + K+A+ ++E+ K +
Sbjct: 136 ISFDDYDPVDKCVLQKSHQIHNYRCDVKKALSKEEMAKAQ 175
>gi|324507426|gb|ADY43149.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 331
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL TTDE+L+ F+ WGE+VD VVM+DP TKRSRGFGF+TYS+ V
Sbjct: 16 EAEQFRKMFIGGLTSTTTDETLKEFYSTWGELVDCVVMRDPTTKRSRGFGFVTYSKQSEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQF 130
+ AM NRPH IDG+ V+ KRAVPRD+ + EAN + K++++ G+++ E+ +YFS +
Sbjct: 76 NAAMENRPHVIDGKTVDLKRAVPRDQSQRNEANVSSKRLYISGVREGHTEEMFTDYFSNY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G + ++ +K TG RGFAF+ F+DYD VDK VL K ++ + R +
Sbjct: 136 GNVIKCEVIVDKNTGKPRGFAFVTFDDYDAVDKCVLIKNHMINNARCD 183
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 52/102 (50%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S ++++I G+ T+E +F +G ++ V+ D T + RGF F
Sbjct: 98 PRDQSQRNEANVSSKRLYISGVREGHTEEMFTDYFSNYGNVIKCEVIVDKNTGKPRGFAF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+T+ + VD + + H I+ + K+A+ ++E+ + + +
Sbjct: 158 VTFDDYDAVDKCVLIKNHMINNARCDVKKALSKEEMNRAQQH 199
>gi|324506130|gb|ADY42625.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 346
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL TTDE+L+ F+ WGE+VD VVM+DP TKRSRGFGF+TYS+ V
Sbjct: 16 EAEQFRKMFIGGLTSTTTDETLKEFYSTWGELVDCVVMRDPTTKRSRGFGFVTYSKQSEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQF 130
+ AM NRPH IDG+ V+ KRAVPRD+ + EAN + K++++ G+++ E+ +YFS +
Sbjct: 76 NAAMENRPHVIDGKTVDPKRAVPRDQSQRNEANVSSKRLYISGVREGHTEEMFTDYFSNY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G + ++ +K TG RGFAF+ F+DYD VDK VL K ++ + R +
Sbjct: 136 GNVIKCEVIVDKNTGKPRGFAFVTFDDYDAVDKCVLIKNHMINNARCD 183
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 3 PRYDDSKCTEPE-SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D S+ E S ++++I G+ T+E +F +G ++ V+ D T + RGF
Sbjct: 98 PR-DQSQRNEANVSSKRLYISGVREGHTEEMFTDYFSNYGNVIKCEVIVDKNTGKPRGFA 156
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
F+T+ + VD + + H I+ + K+A+ ++E+ + + +
Sbjct: 157 FVTFDDYDAVDKCVLIKNHMINNARCDVKKALSKEEMNRAQQH 199
>gi|296485782|tpg|DAA27897.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 360
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E +RK+FIGGL TT+ESL+ +++QWGE+ D VV++ +++SRGFGF+T+S V
Sbjct: 24 ENEQIRKLFIGGLSSETTEESLKNYYQQWGELTDCVVIRGLASQKSRGFGFVTFSSVAEV 83
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVV+ KRAV R++ K + VKK+FVGG+K D EE LREYF ++
Sbjct: 84 DAAMAARPHSIDGRVVDPKRAVSREKSEKQGSLVNVKKLFVGGIKEDTEEHHLREYFEKY 143
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+DYD VDKI+L K + R E
Sbjct: 144 GKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKIMLQKYHAINGHRAE 191
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 118 NVKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKI 177
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
M + H I+G E +A+ R E+
Sbjct: 178 MLQKYHAINGHRAEVGKALSRQEM 201
>gi|170586938|ref|XP_001898236.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594631|gb|EDP33215.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 319
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 117/168 (69%), Gaps = 9/168 (5%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDE+L+ F+ QWGE+VD +VM+DP TKRSRGFGF V
Sbjct: 12 EPEQFRKMFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGF--------V 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLRE-YFSQF 130
D AM+ RPH IDG+ V+ KRAVPRD+ + EAN + K+++V G++++ + + E YFSQF
Sbjct: 64 DAAMAARPHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQF 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G + V ++ +K TG RGFAFI F+DYD VDK VL K + + R +
Sbjct: 124 GKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKCVLQKSHQIHNYRCD 171
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 55/100 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR ++ S +++++ G+ T++ + +F Q+G+++ V ++ D T + RGF F
Sbjct: 86 PRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAF 145
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
I++ + VD + + H I + K+A+ ++E+ K +
Sbjct: 146 ISFDDYDPVDKCVLQKSHQIHNYRCDVKKALSKEEMAKAQ 185
>gi|312083052|ref|XP_003143700.1| hypothetical protein LOAG_08120 [Loa loa]
Length = 294
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 117/168 (69%), Gaps = 9/168 (5%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL TTDE+L+ F+ QWGE+VD +VM+DP TKRSRGFGF V
Sbjct: 12 EPEQFRKMFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGF--------V 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLRE-YFSQF 130
D AM+ RPH IDG+ V+ KRAVPRD+ + EAN + K+++V G++++ + + E YFSQF
Sbjct: 64 DAAMAARPHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQF 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G + V ++ +K TG RGFAFI F+DYD VDK VL K + + R +
Sbjct: 124 GKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKCVLQKSHQIHNYRCD 171
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 55/100 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR ++ S +++++ G+ T++ + +F Q+G+++ V ++ D T + RGF F
Sbjct: 86 PRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAF 145
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
I++ + VD + + H I + K+A+ ++E+ K +
Sbjct: 146 ISFDDYDPVDKCVLQKSHQIHNYRCDVKKALSKEEMAKAQ 185
>gi|34194032|gb|AAH56530.1| Hnrpa0 protein, partial [Danio rerio]
Length = 303
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
+E E L K+F+GGL+ +TT++ L+++FEQ+G + D VV+++ +RSR FGF+TYS ++
Sbjct: 14 SEMEKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEE 73
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 129
D AM+ RPH +DG+ VE KRAV R++ G+PEA A VKK+FVGGLKD EE DL E+FSQ
Sbjct: 74 ADAAMAARPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFFSQ 133
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG IE ++T+K+TG KRGF F+ F D D DK V+ K ++ +VE
Sbjct: 134 FGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVE 182
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE+L +K+F+GGL ++ L FF Q+G I V+ D T + RGFGF+ + +
Sbjct: 104 PEALAKVKKIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDND 163
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H I+G VE K+A+ + EI
Sbjct: 164 SADKAVVLKFHMINGHKVEVKKALTKQEI 192
>gi|355745323|gb|EHH49948.1| hypothetical protein EGM_00696, partial [Macaca fascicularis]
Length = 313
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 123/175 (70%), Gaps = 4/175 (2%)
Query: 8 SKCTEPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
SK P+ L RK+FIGGL + TTDESL++ EQWG ++D VV++DP TKRSRGFGF+T
Sbjct: 2 SKSESPKELEQRRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVT 61
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
Y+ + VD M+ RPH +DGR VETKRAV ++ +P + TVKK+FVGG+K D EE L
Sbjct: 62 YATVQEVDAVMNARPHKVDGRAVETKRAVSGEDSQRPGGHLTVKKVFVGGIKEDTEEHHL 121
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+YF QFG +E + ++T++ +G K GFAF+ F+++D +DKIV+ K + E
Sbjct: 122 IDYFQQFGKMEVIEIMTDRGSGKKSGFAFVTFDNHDSMDKIVIQKYHTVNSHNCE 176
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 48/84 (57%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++KVF+GG+ T + L +F+Q+G++ + +M D + + GF F+T+ +D
Sbjct: 103 TVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKSGFAFVTFDNHDSMDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++ E ++A+ + E+
Sbjct: 163 VIQKYHTVNSHNCEVRKALSKQEM 186
>gi|297278811|ref|XP_001114493.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Macaca
mulatta]
Length = 491
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 123/175 (70%), Gaps = 4/175 (2%)
Query: 8 SKCTEPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
SK P+ L RK+FIGGL + TTDESL++ EQWG ++D VV++DP TKRSRGFGF+T
Sbjct: 123 SKSESPKELEQRRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVT 182
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
Y+ + VD M+ RPH +DGR VETKRAV ++ +P + TVKK+FVGG+K D EE L
Sbjct: 183 YATVQEVDAVMNARPHKVDGRAVETKRAVSGEDSQRPGGHLTVKKVFVGGIKEDTEEHHL 242
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+YF QFG +E + ++T++ +G K GFAF+ F+++D +DKIV+ K + E
Sbjct: 243 IDYFQQFGKMEVIEIMTDRGSGKKSGFAFVTFDNHDSMDKIVIQKYHTVNSHNCE 297
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 48/84 (57%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++KVF+GG+ T + L +F+Q+G++ + +M D + + GF F+T+ +D
Sbjct: 224 TVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKSGFAFVTFDNHDSMDKI 283
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++ E ++A+ + E+
Sbjct: 284 VIQKYHTVNSHNCEVRKALSKQEM 307
>gi|13436308|gb|AAH04945.1| Unknown (protein for IMAGE:3615335), partial [Homo sapiens]
Length = 298
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 115/154 (74%), Gaps = 1/154 (0%)
Query: 26 YRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGR 85
+ TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + VD AM+ RPH +DGR
Sbjct: 1 FETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGR 60
Query: 86 VVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKET 144
VVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +
Sbjct: 61 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGS 120
Query: 145 GAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G KRGFAF+ F+D+D VDKIV+ K + E
Sbjct: 121 GKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 154
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 70 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 129
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 130 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 164
>gi|441657453|ref|XP_004091180.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 379
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIG L + TTD+SL+ +FE+WG + D VVM+D TKRSRGFGF+ YS V
Sbjct: 30 EPEQLRKLFIGDLSFETTDDSLREYFEKWGTLTDCVVMRDAQTKRSRGFGFVAYSCVTEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RP +DGRVVE KRAV R++ KP A+ TVKK+FVG +K D EE +LR+YF ++
Sbjct: 90 DAAMCARPCKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGSIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ ++ ++++G KRGFA + F+D+D VDK V+ K + E
Sbjct: 150 GKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKTVVQKYHTINGHNCE 197
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+G + T + +L+ +FE++G+I + VM+D + + RGF +T+ + VD
Sbjct: 124 TVKKIFVGSIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKT 183
Query: 75 MSNRPHNIDGRVVETKRA 92
+ + H I+G E K+A
Sbjct: 184 VVQKYHTINGHNCEVKKA 201
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+G L + DD LREYF ++GT+ ++ + +T RGF F+ ++
Sbjct: 28 PKEPEQLRKLFIGDLSFETTDDSLREYFEKWGTLTDCVVMRDAQTKRSRGFGFVAYSCVT 87
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 88 EVDAAMCARPCKVDGRVVE 106
>gi|47550715|ref|NP_999871.1| heterogeneous nuclear ribonucleoprotein A0b [Danio rerio]
gi|42542945|gb|AAH66434.1| Heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
Length = 314
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
+E E L K+F+GGL+ +TT++ L+++FEQ+G + D VV+++ +RSR FGF+TYS ++
Sbjct: 2 SEMEKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEE 61
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 129
D AM+ RPH +DG+ VE KRAV R++ G+PEA A VKK+FVGGLKD EE DL E+FSQ
Sbjct: 62 ADAAMAARPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFFSQ 121
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG IE ++T+K+TG KRGF F+ F D D DK V+ K ++ +VE
Sbjct: 122 FGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVE 170
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE+L +K+F+GGL ++ L FF Q+G I V+ D T + RGFGF+ + +
Sbjct: 92 PEALAKVKKIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDND 151
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H I+G VE K+A+ + EI
Sbjct: 152 SADKAVVLKFHMINGHKVEVKKALTKQEI 180
>gi|296192610|ref|XP_002744138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 335
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 119/164 (72%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
LRK+F GGL + TTDESL++ FEQWG + D VVM++P TKRSRGFGF+TY+ + VD A+
Sbjct: 28 LRKLFTGGLSFETTDESLRSHFEQWGTLKDGVVMRNPNTKRSRGFGFVTYATVEEVDAAI 87
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE 134
+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+G IE
Sbjct: 88 NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIE 147
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+ ++ ++ +G KRGFAF ++D +DKIV+ K + E
Sbjct: 148 VIEIMMDRGSGKKRGFAFAISANHDSMDKIVIQKYHTVNGHNCE 191
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 53/101 (52%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F
Sbjct: 107 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMMDRGSGKKRGFAFA 166
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ +D + + H ++G E ++A+ E+ ++
Sbjct: 167 ISANHDSMDKIVIQKYHTVNGHNCEVRKALSEQEMASASSS 207
>gi|226472204|emb|CAX77138.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 127/179 (70%), Gaps = 6/179 (3%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
M+P + DSK + +K+FIGGL +T + SL+ ++ QWGEI+DVVVMKDP +++SRGF
Sbjct: 2 MRP-FTDSKA---DQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGF 57
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQE 119
F+TY +A VD A +NRPH +DG+ V+TKRA+PR+E PE +A VKK+FVG L KD
Sbjct: 58 VFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPREET-SPEVHAAVKKIFVGALKKDVT 116
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+DL +YFSQFGT+ +V K+T RGFAF+ F+D D VDK++L++ + D + +
Sbjct: 117 NEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKAD 175
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 11 TEPE---SLRKVFIGGLDYRTTDESLQAFFEQWGEIVD--VVVMKDPITKRSRGFGFITY 65
T PE +++K+F+G L T+E L +F Q+G + D +V+ KD T SRGF F+T+
Sbjct: 95 TSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKD--TNTSRGFAFVTF 152
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN-ATVKKMFVGG 114
+ VD + RPH I + ++A+ R+E+ K + A V+ + GG
Sbjct: 153 DDTDAVDKVILARPHTIKDSKADVRKALSREEMNKMRSKPAPVRSDYNGG 202
>gi|47086749|ref|NP_997810.1| heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
gi|44890516|gb|AAH66672.1| Zgc:77366 [Danio rerio]
Length = 305
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 116/164 (70%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ +TTD+ L+ FEQ+G++ D VV+++ KRSR FGF+TYS D AM
Sbjct: 9 LCKLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEADSAM 68
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIE 134
S RPH +DG VE KRAV R++ GKPEA A VKK+F+GGLKD EED LR+ FSQFG +E
Sbjct: 69 SARPHILDGNNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEEDHLRDCFSQFGAVE 128
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++T+KETG KRGF F+ F D D DK V+ K ++ +VE
Sbjct: 129 KAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHMINGHKVE 172
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE+L +K+FIGGL ++ L+ F Q+G + V+ D T + RGFGF+ + +
Sbjct: 93 KPEALAKVKKIFIGGLKDDIEEDHLRDCFSQFGAVEKAEVITDKETGKKRGFGFVYFEDN 152
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H I+G VE K+A+ + E+
Sbjct: 153 DSADKAVVLKFHMINGHKVEVKKALTKQEM 182
>gi|297690158|ref|XP_002822492.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pongo abelii]
Length = 320
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK FI GL + T+DESL++ EQWG + D VVM+DP T RSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKPFIRGLRFETSDESLRSHSEQWGMLTDCVVMRDPNTNRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D M+ RPH + GRVVE K AV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DTVMNARPHKVGGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHPLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G E + ++T++ +G K+ FAFI F+++D DKIV+ K ++ R E
Sbjct: 129 GKTEVIEIMTDQGSGKKKDFAFITFDNHDSTDKIVIQKYHIVNGRNCE 176
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 49/84 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+ + +M D + + + F FIT+ D
Sbjct: 103 TVKKIFVGGIKEDTEEHPLRDYFEQYGKTEVIEIMTDQGSGKKKDFAFITFDNHDSTDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++GR E ++A+ + E+
Sbjct: 163 VIQKYHIVNGRNCEVRKALSKQEM 186
>gi|149709520|ref|XP_001501077.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Equus caballus]
Length = 320
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FI GL + TTDESL++ EQ + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGLSFETTDESLRSHSEQRRTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ + A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVLREDSQRLGAHLTVKKLFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G KRGFAF+ F+D+D VDK V+ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFLTFDDHDSVDKSVIQKYHTVNGHNCE 176
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 56/95 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 92 REDSQRLGAHLTVKKLFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFL 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD ++ + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKSVIQKYHTVNGHNCEVRKALSKQEM 186
>gi|402897281|ref|XP_003911697.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + T DESL++ FEQW ++D VVM+DP K SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETPDESLRSQFEQWRTLMDCVVMRDPNIKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RP +DGR VE KRAV R++ +P A++TVKK+FVG +K D EE LR+YF Q
Sbjct: 69 DAAMNARPQKVDGRGVEPKRAVSREDSQRPGAHSTVKKVFVGEIKEDAEEHHLRDYFEQC 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE + ++T++ +G K+GFAF+ F+D+D VDK ++ K + E
Sbjct: 129 GKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKTIIQKYHTVNGHNCE 176
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++KVF+G + + L+ +FEQ G+I + +M D + + +GF F+
Sbjct: 92 REDSQRPGAHSTVKKVFVGEIKEDAEEHHLRDYFEQCGKIEVIEIMTDRGSGKKKGFAFV 151
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 TFDDHDSVDKTIIQKYHTVNGHNCEVRKALSKQEM 186
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 121/163 (74%), Gaps = 2/163 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL+ +T ++SL+A++ QWGEI DVVVMKDP + +SRGFGF+T+ EA VD A +
Sbjct: 13 KKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQA 72
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIES 135
+RPH +DG+ V++KRA+PR+E PE +A VKK+FVGGL KD +DL EYF +FG +
Sbjct: 73 DRPHKVDGKDVDSKRAMPREET-SPEVHAAVKKIFVGGLKKDVTNEDLAEYFGKFGNVTD 131
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++V K+T RGFAF+ F+D D VDK++L++ ++ + +
Sbjct: 132 ASIVVAKDTNTSRGFAFVTFDDTDSVDKVILARPHMIGGHKAD 174
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Query: 11 TEPE---SLRKVFIGGLDYRTTDESLQAFFEQWGEIVD--VVVMKDPITKRSRGFGFITY 65
T PE +++K+F+GGL T+E L +F ++G + D +VV KD T SRGF F+T+
Sbjct: 94 TSPEVHAAVKKIFVGGLKKDVTNEDLAEYFGKFGNVTDASIVVAKD--TNTSRGFAFVTF 151
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
+ VD + RPH I G + ++A+ R+E+ K + +M
Sbjct: 152 DDTDSVDKVILARPHMIGGHKADVRKALSREELRKVQTKPPPARM 196
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 97 EIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 155
++G P+A+ KK+FVGGL + ED LR Y+SQ+G I V ++ + + RGF F+ F
Sbjct: 3 QVGDPKADQD-KKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTF 61
Query: 156 NDYDVVDK 163
+ VDK
Sbjct: 62 KEASSVDK 69
>gi|209155482|gb|ACI33973.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
gi|223647890|gb|ACN10703.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 279
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGGL+ TTD L+ FEQ+G++ D VV+++ +RSR FGF+TY+ A D AM
Sbjct: 5 LCKLFIGGLNVHTTDGGLRKHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYATADEADAAM 64
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE 134
S RPH +DG VE KRAV R++ GKPEA A VKK+F+GGLK D E++ L EYFSQFGTIE
Sbjct: 65 SARPHALDGNNVELKRAVAREDAGKPEALAKVKKIFIGGLKEDIEDEHLSEYFSQFGTIE 124
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++++ +TG KRGF F+ F DYD DK V+ K + +VE
Sbjct: 125 KAEVISDNQTGKKRGFGFVYFEDYDSADKAVVLKFHHINGHKVE 168
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE+L +K+FIGGL DE L +F Q+G I V+ D T + RGFGF+ + +
Sbjct: 89 KPEALAKVKKIFIGGLKEDIEDEHLSEYFSQFGTIEKAEVISDNQTGKKRGFGFVYFEDY 148
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H+I+G VE K+A+ + E+
Sbjct: 149 DSADKAVVLKFHHINGHKVEVKKALTKQEM 178
>gi|115532850|ref|NP_001040945.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
gi|351063093|emb|CCD71137.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
Length = 347
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE+LRK+F+GGL TTD+ ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T+S V
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH IDG+ V+ KRAVPRD+ + E+N + K+++V G++ D ED L EYF+++
Sbjct: 78 DAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKY 137
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+ ++ +K T RGF F+ F+D+D VD+ VL K ++ R +
Sbjct: 138 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 57/102 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S +++++ G+ T++ L +F ++G + ++ D T++ RGFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+T+ + VD + + H ++G + ++ + +DE+ K + N
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMN 201
>gi|25145229|ref|NP_500326.2| Protein HRP-1, isoform a [Caenorhabditis elegans]
gi|74965787|sp|Q22037.1|ROA1_CAEEL RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1
gi|217300|dbj|BAA01645.1| hnRNP like protein [Caenorhabditis elegans]
gi|351063090|emb|CCD71134.1| Protein HRP-1, isoform a [Caenorhabditis elegans]
Length = 346
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE+LRK+F+GGL TTD+ ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T+S V
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH IDG+ V+ KRAVPRD+ + E+N + K+++V G++ D ED L EYF+++
Sbjct: 78 DAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKY 137
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+ ++ +K T RGF F+ F+D+D VD+ VL K ++ R +
Sbjct: 138 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 57/102 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S +++++ G+ T++ L +F ++G + ++ D T++ RGFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+T+ + VD + + H ++G + ++ + +DE+ K + N
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMN 201
>gi|311248526|ref|XP_003123185.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 354
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 119/165 (72%), Gaps = 3/165 (1%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K E E RK+FIGGL T +ESL+ +++QWG++ D VV++DP ++RSRGFGF+ +S
Sbjct: 13 KKRESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSV 72
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AM+ RPH+IDGRVV +KR VPR+E GKP A T KK+FVGG+K D E LR+YF
Sbjct: 73 AEVDAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYF 132
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++GTI+++ ++ +++G K F F+ F+D+D VDKIVL K +
Sbjct: 133 ERYGTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKIVLQKYHTI 175
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + K + +K+F+GG+ TT+ L+ +FE++G I + +++ + R FGF
Sbjct: 98 PREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIRQ--SGRKTAFGF 155
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVG 113
+T+ + VD + + H I+G + ++A+ R + + +++ + VG
Sbjct: 156 VTFDDHDPVDKIVLQKYHTINGHHAQLEKALSRQGMQEVQSSRRRRGRHVG 206
>gi|311248536|ref|XP_003123190.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 354
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 119/165 (72%), Gaps = 3/165 (1%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K E E RK+FIGGL T +ESL+ +++QWG++ D VV++DP ++RSRGFGF+ +S
Sbjct: 13 KKRESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSV 72
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AM+ RPH+IDGRVV +KR VPR+E GKP A T KK+FVGG+K D E LR+YF
Sbjct: 73 AEVDAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYF 132
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++GTI+++ ++ +++G K F F+ F+D+D VDKIVL K +
Sbjct: 133 ERYGTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKIVLQKYHTI 175
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + K + +K+F+GG+ TT+ L+ +FE++G I + +++ + R FGF
Sbjct: 98 PREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIRQ--SGRKTAFGF 155
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVG 113
+T+ + VD + + H I+G + ++A+ R + + +++ + VG
Sbjct: 156 VTFDDHDPVDKIVLQKYHTINGHHAQLEKALSRQGMQEVQSSRRGRGRHVG 206
>gi|308465164|ref|XP_003094843.1| CRE-HRP-1 protein [Caenorhabditis remanei]
gi|308246407|gb|EFO90359.1| CRE-HRP-1 protein [Caenorhabditis remanei]
Length = 344
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE+LRK+F+GGL TTDE ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T++ V
Sbjct: 18 EPENLRKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEV 77
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH IDG+ V+ KRAVPRD+ + E+N + K+++V G++ D ED L +YFS++
Sbjct: 78 DAAMKQRPHVIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHNEDMLTDYFSKY 137
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G + ++ +K T RGF F+ F+D+D VD+ VL K ++ R +
Sbjct: 138 GNVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 55/100 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S +++++ G+ ++ L +F ++G + ++ D T++ RGFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHNEDMLTDYFSKYGNVTKSEIILDKATQKPRGFGF 159
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
+T+ + VD + + H ++G + ++ + +DE+ K +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
>gi|332837971|ref|XP_001142796.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 4 [Pan troglodytes]
Length = 326
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL + T+DESL++ EQWG + + VVM+DP T RSRGFGF+ Y+ + V
Sbjct: 9 EPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMRDPNTNRSRGFGFVPYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH + GRVVE K AV R++ +P A TVKK+FVGG+K D EE LR+Y+ Q+
Sbjct: 69 DAAMNARPHKMGGRVVEPKTAVSREDSQRPGAYLTVKKIFVGGIKEDTEEHPLRDYYEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G E + ++T++ +G KR FAF+ F+++D DKIV+ K ++ E
Sbjct: 129 GNTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKIVIQKYHIVNGHNCE 176
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 47/84 (55%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ ++EQ+G + +M D + + R F F+T+ D
Sbjct: 103 TVKKIFVGGIKEDTEEHPLRDYYEQYGNTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + ++
Sbjct: 163 VIQKYHIVNGHNCEVRKALSKQKM 186
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL+ + D+ LR + Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMRDPNTNRSRGFGFVPYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKMGGRVVE 85
>gi|341894622|gb|EGT50557.1| CBN-HRP-1 protein [Caenorhabditis brenneri]
Length = 343
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE+LRK+F+GGL TTDE ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T++ V
Sbjct: 18 EPENLRKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTGKTEV 77
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH IDG+ V+ KRAVPRD+ + E+N + K+++V G++ D ED L EYFS++
Sbjct: 78 DAAMKQRPHVIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFSKY 137
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G + ++ +K T RGF F+ F+D+D VD+ VL K ++ R +
Sbjct: 138 GNVVKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 58/102 (56%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S +++++ G+ T++ L +F ++G +V ++ D T++ RGFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFSKYGNVVKSEIILDKATQKPRGFGF 159
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+T+ + VD + + H ++G + ++ + +DE+ K + N
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMNKAQMN 201
>gi|402585407|gb|EJW79347.1| heterogeneous nuclear ribonucleoprotein A1 [Wuchereria bancrofti]
Length = 322
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 118/161 (73%), Gaps = 1/161 (0%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL TTDE+L+ F+ +WG +VD VVM+DP TKRSRGFGF+++S+ VD AM+NR
Sbjct: 1 MFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMANR 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDL-REYFSQFGTIESVN 137
PH IDG+ V+ KRAVPR++ + EAN + K+++V G++++ +D+ +E+F ++G I
Sbjct: 61 PHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCE 120
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K TG RGFAFI F+DYD VDK VL K ++ + R +
Sbjct: 121 IIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCD 161
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S +++++ G+ T++ + F ++G I+ ++ D T + RGF F
Sbjct: 76 PREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAF 135
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
IT+ + VD + + H I+ + K+A+ ++E+ K
Sbjct: 136 ITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAK 173
>gi|397467692|ref|XP_003805542.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 326
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL + T+DESL++ EQWG + + VVM+DP T RSRGFGF+ Y+ + V
Sbjct: 9 EPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMRDPNTNRSRGFGFVPYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH + GRVVE K AV R++ +P A TVKK+FVGG+K D EE LR+Y+ Q+
Sbjct: 69 DAAMNARPHKMGGRVVEPKTAVSREDSQRPGAYLTVKKIFVGGIKEDTEEHPLRDYYEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G E + ++T++ +G KR FAF+ F+++D DKIV+ K ++ E
Sbjct: 129 GKTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKIVIQKYHIVNGHNCE 176
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 48/84 (57%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ ++EQ+G+ + +M D + + R F F+T+ D
Sbjct: 103 TVKKIFVGGIKEDTEEHPLRDYYEQYGKTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + ++
Sbjct: 163 VIQKYHIVNGHNCEVRKALSKQKM 186
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL+ + D+ LR + Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMRDPNTNRSRGFGFVPYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKMGGRVVE 85
>gi|112180524|gb|AAH50513.2| Hnrpa0l protein [Danio rerio]
Length = 302
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 119/165 (72%), Gaps = 3/165 (1%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVD-VVVMKDPITKRSRGFGFITYSEAKMVDDA 74
L K+F+GGL+ +TTDE L+A FEQ+G++ D VVVM P+ +RSR FGF+TYS + D A
Sbjct: 5 LCKLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPL-QRSRCFGFVTYSSTEEADAA 63
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTI 133
MS RPH +DG V+ KRAV R++ GKPE A VKK+FVGGLKD ED+ L++YFSQFG I
Sbjct: 64 MSARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPI 123
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E ++T+K+TG KRGF F+ F+D D DK V+ K + +VE
Sbjct: 124 EKAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVE 168
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE L +K+F+GGL DE LQ +F Q+G I V+ D T + RGFGF+ + +
Sbjct: 89 KPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDN 148
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H+I G VE K+A+ + E+
Sbjct: 149 DSADKAVVMKFHSICGHKVEVKKALTKQEM 178
>gi|40850963|gb|AAH65334.1| Hnrpa0l protein, partial [Danio rerio]
Length = 299
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 117/164 (71%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ +TTDE L+A FEQ+G++ D VV+ + +RSR FGF+TYS + D AM
Sbjct: 2 LCKLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSIEEADAAM 61
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIE 134
S RPH +DG V+ KRAV R++ GKPE A VKK+FVGGLKD ED+ L++YFSQFG IE
Sbjct: 62 SARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIE 121
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++T+K+TG KRGF F+ F+D D DK V+ K + +VE
Sbjct: 122 KAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVE 165
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE L +K+F+GGL DE LQ +F Q+G I V+ D T + RGFGF+ + +
Sbjct: 86 KPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDN 145
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H+I G VE K+A+ + E+
Sbjct: 146 DSADKAVVMKFHSICGHKVEVKKALTKQEM 175
>gi|395862544|ref|XP_003803504.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Otolemur garnettii]
Length = 172
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/152 (55%), Positives = 112/152 (73%), Gaps = 6/152 (3%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
G IE + ++T++ +G + ND +V+
Sbjct: 129 GKIEVIEIMTDRGSGLT-----LSLNDMSLVE 155
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|387018106|gb|AFJ51171.1| Heterogeneous nuclear ribonucleoprotein A0 [Crotalus adamanteus]
Length = 307
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 115/168 (68%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +TT+ L+ +FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTTEAGLREYFEAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VVE KRAV R++ +P A+A VKK+FVGGLK D E+DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNVVELKRAVSREDSARPGAHAKVKKLFVGGLKGDLGENDLVEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +E +++NK++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GPVEKAEIISNKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ + + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDLGENDLVEHFSQFGPVEKAEIISNKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVPR++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPREDI 179
>gi|241710586|ref|XP_002412054.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215505115|gb|EEC14609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 275
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 112/169 (66%), Gaps = 35/169 (20%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
+EPE RK+FIGGLDY+TT++SL+ FEQWGE+VD VV
Sbjct: 8 SEPEQFRKLFIGGLDYKTTEDSLKGHFEQWGEVVDCVV---------------------- 45
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 129
DGR VE KRAVPR+E G+PEA ATVKK+FVGGLKD +E DLR+YF+Q
Sbjct: 46 ------------DGREVEPKRAVPREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFAQ 93
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG I SVN+VT KETG KRGFAF+E++DYD VDKIVL + +L +R E
Sbjct: 94 FGNILSVNLVTEKETGRKRGFAFVEYDDYDPVDKIVLKRHHMLKGKRTE 142
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + + +++KVF+GGL + L+ +F Q+G I+ V ++ + T R RGF F
Sbjct: 57 PREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFAQFGNILSVNLVTEKETGRKRGFAF 116
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ Y + VD + R H + G+ E K+A+ + E+
Sbjct: 117 VEYDDYDPVDKIVLKRHHMLKGKRTEVKKALSKQEM 152
>gi|444729715|gb|ELW70122.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 323
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+FIG L + TT+ SL++++EQWG++ D VVM+ P +KRSRGFGF+T+S
Sbjct: 26 EKEQFCKLFIGDLSFETTEVSLKSYYEQWGKLTDCVVMRVPASKRSRGFGFVTFSSMAEA 85
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQF 130
D AM+ RP +IDGRV+E K AV R+E GKP A+ TVKK+F+GG+ +D EE LR+YF ++
Sbjct: 86 DAAMTTRPQSIDGRVIEPKCAVAREESGKPGAHVTVKKLFIGGIEEDTEEHHLRDYFEEY 145
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I++ ++T++++G KR F F+ F+D+D VDKIVL + + E
Sbjct: 146 RKIDTTKIITDRQSGKKRSFDFVTFDDHDPVDKIVLQEYCTMNGHNAE 193
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+FIGG++ T + L+ +FE++ +I ++ D + + R F F+T+ + VD
Sbjct: 120 TVKKLFIGGIEEDTEEHHLRDYFEEYRKIDTTKIITDRQSGKKRSFDFVTFDDHDPVDKI 179
Query: 75 MSNRPHNIDGRVVETKRAVPR 95
+ ++G E ++ + R
Sbjct: 180 VLQEYCTMNGHNAEVRKTLSR 200
>gi|345792219|ref|XP_864182.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Canis lupus familiaris]
Length = 321
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 118/160 (73%), Gaps = 2/160 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FI GL +TTDESL++ EQ G ++D VVM+DP TK SRGFGF TY+ + V
Sbjct: 9 EPEQLWKLFIKGLSSKTTDESLRSHCEQQGALMDCVVMRDPNTKHSRGFGFTTYATREDV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREY-FSQ 129
D M+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE L++Y F Q
Sbjct: 69 DAVMNARPHKMDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLKDYFFEQ 128
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKI 169
+ IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 YEKIEVIEIMTDRGSGKKRGFAFVTFDDHDFVDKIVIQKC 168
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQ-AFFEQWGEIVDVVVMKDPITKRSRGFGF 62
R D + +++K+F+GG+ T + L+ FFEQ+ +I + +M D + + RGF F
Sbjct: 92 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLKDYFFEQYEKIEVIEIMTDRGSGKKRGFAF 151
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD + + H ++G E ++A+ + E+
Sbjct: 152 VTFDDHDFVDKIVIQKCHPVNGHDHEVRKALSKQEM 187
>gi|395849370|ref|XP_003797301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Otolemur garnettii]
Length = 316
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 116/158 (73%), Gaps = 2/158 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E LRK+FIGGL + ESL++ EQWG + D VVM+DP TKRSRGF F+TY + V
Sbjct: 9 ELEQLRKLFIGGLSFEMM-ESLRSHSEQWGMLTDCVVMRDPNTKRSRGFRFVTYVTVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A++ RPH +DGRVVE KRAV R++ + +A+ TVKK FVGG+K D EE LR YF Q+
Sbjct: 68 DAAVNARPHKVDGRVVEPKRAVSREDSQRRDAHLTVKKFFVGGIKEDTEEHHLRAYFEQY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G +E + ++T++++G KRGFAF+ F+D+D VD IV+ K
Sbjct: 128 GKMEVIEIMTDQDSGKKRGFAFVTFDDHDSVDNIVIQK 165
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 53/90 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K F+GG+ T + L+A+FEQ+G++ + +M D + + RGF F+T+ + VD+
Sbjct: 102 TVKKFFVGGIKEDTEEHHLRAYFEQYGKMEVIEIMTDQDSGKKRGFAFVTFDDHDSVDNI 161
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + ++ E ++A+ + E+ ++
Sbjct: 162 VIQKYDTVNCHNCEVRKALSKQEMASASSS 191
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 101 PEANATVKKMFVGGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 160
P+ ++K+F+GGL + + LR + Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKELEQLRKLFIGGLSFEMMESLRSHSEQWGMLTDCVVMRDPNTKRSRGFRFVTYVTVEE 66
Query: 161 VDKIVLSKITLLLDRRVE 178
VD V ++ + R VE
Sbjct: 67 VDAAVNARPHKVDGRVVE 84
>gi|426230606|ref|XP_004009357.1| PREDICTED: uncharacterized protein LOC101121854 [Ovis aries]
Length = 477
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 115/156 (73%), Gaps = 1/156 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+F+GGL TT+E+L +++QWG + D VV++DP ++ SR FGF+T+S VD
Sbjct: 18 EEFRKLFVGGLSSETTEETLWNYYQQWGYLTDCVVIRDPASQTSRRFGFVTFSSVAEVDA 77
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
AM+ RPH+IDG+ V KRAVPR++ GKP A TVKK+FV + +D E+ LR+YF ++G
Sbjct: 78 AMAARPHSIDGKRVTPKRAVPREDYGKPGALVTVKKLFVCRIGEDTEKHHLRDYFEKYGN 137
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
I ++ +++++E+G KRGF F+ F+D+D VDK+VL K
Sbjct: 138 INAIEIISDRESGRKRGFGFVTFDDHDPVDKLVLQK 173
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D K +++K+F+ + T L+ +FE++G I + ++ D + R RGFGF
Sbjct: 98 PREDYGKPGALVTVKKLFVCRIGEDTEKHHLRDYFEKYGNINAIEIISDRESGRKRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD + + H I+G E ++A+ R E+
Sbjct: 158 VTFDDHDPVDKLVLQKYHTINGYHAEVRKALSRQEM 193
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 104 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
N +K+FVGGL + E+ L Y+ Q+G + ++ + + R F F+ F+ VD
Sbjct: 17 NEEFRKLFVGGLSSETTEETLWNYYQQWGYLTDCVVIRDPASQTSRRFGFVTFSSVAEVD 76
Query: 163 KIVLSK 168
+ ++
Sbjct: 77 AAMAAR 82
>gi|426370462|ref|XP_004052183.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 326
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 117/168 (69%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL + T+DESL++ EQWG + + VVM DP T RSRGFGF+T + + V
Sbjct: 9 EPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMSDPNTNRSRGFGFVTCATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH + GRVVE K AV R++ +P A TVKK+FV G+K D EE LR+Y+ Q+
Sbjct: 69 DAAMNARPHKVGGRVVEPKVAVSREDSQRPGAYLTVKKIFVSGIKEDTEEHPLRDYYEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G E + ++T++ +G KR FAF+ F+++D DKIV+ K ++ E
Sbjct: 129 GKTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKIVIQKYHIVNGHNCE 176
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 47/84 (55%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+ G+ T + L+ ++EQ+G+ + +M D + + R F F+T+ D
Sbjct: 103 TVKKIFVSGIKEDTEEHPLRDYYEQYGKTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHIVNGHNCEVRKALSKKEM 186
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL+ + D+ LR + Q+GT+ ++++ T RGF F+ +
Sbjct: 7 PKEPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMSDPNTNRSRGFGFVTCATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVGGRVVE 85
>gi|426254057|ref|XP_004020702.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ovis aries]
Length = 325
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 115/156 (73%), Gaps = 1/156 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+F+GGL TT+E+L +++QWG + D VV++DP ++ SR FGF+T+S VD
Sbjct: 18 EEFRKLFVGGLSSETTEETLWNYYQQWGYLTDCVVIRDPASQTSRRFGFVTFSSVAEVDA 77
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
AM+ RPH+IDG+ V KRAVPR++ GKP A TVKK+FV + +D E+ LR+YF ++G
Sbjct: 78 AMAARPHSIDGKRVTPKRAVPREDYGKPGALVTVKKLFVCRIGEDTEKHHLRDYFEKYGN 137
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
I ++ +V+++E+G KRGF F+ F+D+D VDK+VL K
Sbjct: 138 INAIEIVSDRESGRKRGFGFVTFDDHDPVDKLVLQK 173
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D K +++K+F+ + T L+ +FE++G I + ++ D + R RGFGF
Sbjct: 98 PREDYGKPGALVTVKKLFVCRIGEDTEKHHLRDYFEKYGNINAIEIVSDRESGRKRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD + + H I+G E ++A+ R E+
Sbjct: 158 VTFDDHDPVDKLVLQKYHTINGYHAEVRKALSRQEM 193
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 104 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
N +K+FVGGL + E+ L Y+ Q+G + ++ + + R F F+ F+ VD
Sbjct: 17 NEEFRKLFVGGLSSETTEETLWNYYQQWGYLTDCVVIRDPASQTSRRFGFVTFSSVAEVD 76
Query: 163 KIVLSKITLLLDRRV 177
+ ++ + +RV
Sbjct: 77 AAMAARPHSIDGKRV 91
>gi|345316006|ref|XP_001514052.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Ornithorhynchus anatinus]
Length = 280
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 103/134 (76%), Gaps = 1/134 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKET 144
G IES + +E+
Sbjct: 129 GKIESKQSLAGEES 142
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|403277845|ref|XP_003930556.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 295
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 118/171 (69%), Gaps = 4/171 (2%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI---TYSEA 68
EPE LR +FIGGL + TT ESL+++FEQWG + D +VM+DP TKRS GFG TY+
Sbjct: 9 EPEQLRMLFIGGLSFETTKESLRSYFEQWGTLTDCMVMRDPNTKRSGGFGGFGFHTYAAV 68
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
+ VD AM+ RPH +DGRVVE KRAV R++ +P A TVKK+ VGG+K D EE LR+YF
Sbjct: 69 EKVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAYLTVKKILVGGIKEDAEEHHLRDYF 128
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
Q+G E + ++ ++ +G KRGFAF+ F+D+D V+K V+ K + E
Sbjct: 129 EQYGKTEVIEIMADRGSGKKRGFAFVTFDDHDSVNKTVIQKYHTVNGHNCE 179
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 49/84 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+ +GG+ + L+ +FEQ+G+ + +M D + + RGF F+T+ + V+
Sbjct: 106 TVKKILVGGIKEDAEEHHLRDYFEQYGKTEVIEIMADRGSGKKRGFAFVTFDDHDSVNKT 165
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 166 VIQKYHTVNGHNCEVRKALSKQEM 189
>gi|431892627|gb|ELK03060.1| Heterogeneous nuclear ribonucleoprotein A0 [Pteropus alecto]
Length = 307
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|73970814|ref|XP_538645.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 isoform 1
[Canis lupus familiaris]
Length = 310
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|344264962|ref|XP_003404558.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Loxodonta africana]
Length = 307
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|311250199|ref|XP_003124018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Sus
scrofa]
Length = 302
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|119895504|ref|XP_593096.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|297477251|ref|XP_002689241.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|296485329|tpg|DAA27444.1| TPA: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
Length = 305
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|119936162|gb|ABM06082.1| heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|440909359|gb|ELR59272.1| Heterogeneous nuclear ribonucleoprotein A0, partial [Bos grunniens
mutus]
Length = 192
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|355694908|gb|AER99825.1| heteroproteinous nuclear ribonucleoprotein A0 [Mustela putorius
furo]
Length = 295
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|380792859|gb|AFE68305.1| heterogeneous nuclear ribonucleoprotein A0, partial [Macaca
mulatta]
Length = 229
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|355691634|gb|EHH26819.1| hypothetical protein EGK_16888 [Macaca mulatta]
Length = 303
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|114601869|ref|XP_001169959.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pan
troglodytes]
gi|397518219|ref|XP_003829292.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pan
paniscus]
gi|410211572|gb|JAA03005.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410249756|gb|JAA12845.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410295930|gb|JAA26565.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410346956|gb|JAA40716.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
Length = 306
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|388453863|ref|NP_001253568.1| heterogeneous nuclear ribonucleoprotein A0 [Macaca mulatta]
gi|384944966|gb|AFI36088.1| heterogeneous nuclear ribonucleoprotein A0 [Macaca mulatta]
Length = 303
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|5803036|ref|NP_006796.1| heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|297676052|ref|XP_002815964.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pongo
abelii]
gi|8134660|sp|Q13151.1|ROA0_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A0;
Short=hnRNP A0
gi|773644|gb|AAA65094.1| heterogeneous ribonucleoprotein A0 [Homo sapiens]
gi|12654371|gb|AAH01008.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|13938287|gb|AAH07271.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|14424524|gb|AAH09284.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|15080451|gb|AAH11972.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|15278047|gb|AAH12980.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|17511973|gb|AAH18949.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|17939453|gb|AAH19271.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|20810403|gb|AAH28976.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|20987729|gb|AAH30249.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|48146089|emb|CAG33267.1| HNRPA0 [Homo sapiens]
gi|119582586|gb|EAW62182.1| heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|261861132|dbj|BAI47088.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
Length = 305
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|259089191|ref|NP_001158633.1| Heterogeneous nuclear ribonucleoprotein A0 [Oncorhynchus mykiss]
gi|225705442|gb|ACO08567.1| Heterogeneous nuclear ribonucleoprotein A0 [Oncorhynchus mykiss]
Length = 224
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 114/164 (69%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ TTD+ L+ FEQ+G++ D VV+++ +RSR FGF+TYS + D AM
Sbjct: 5 LCKLFVGGLNVETTDDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYSSGEEADAAM 64
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIE 134
+ RPH +DG VE KRAV R++ G+PEA A VKK+F+GGLKD EDD L +YFSQFG IE
Sbjct: 65 AARPHVVDGTNVELKRAVAREDAGRPEALAKVKKIFIGGLKDDIEDDHLNDYFSQFGAIE 124
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++++K+T KRGF F+ F D D DK V+ K + +VE
Sbjct: 125 KAEVISDKQTLKKRGFGFVYFEDNDSADKAVVLKFHTINGHKVE 168
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE+L +K+FIGGL D+ L +F Q+G I V+ D T + RGFGF+ + +
Sbjct: 90 PEALAKVKKIFIGGLKDDIEDDHLNDYFSQFGAIEKAEVISDKQTLKKRGFGFVYFEDND 149
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H I+G VE K+A+ + E+
Sbjct: 150 SADKAVVLKFHTINGHKVEVKKALTKQEM 178
>gi|426231021|ref|XP_004009550.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Ovis aries]
Length = 302
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|426350099|ref|XP_004042619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0, partial
[Gorilla gorilla gorilla]
Length = 191
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|32879847|gb|AAP88754.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
gi|60653987|gb|AAX29686.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
Length = 306
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|395817866|ref|XP_003782366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Otolemur
garnettii]
Length = 238
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|402911238|ref|XP_003918244.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 321
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 116/169 (68%), Gaps = 2/169 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP RK+FIG L + TT+ESL++ FEQWG ++D VVM+ P TK SR FGF Y+ + V
Sbjct: 9 EPNRQRKLFIGVLSFETTNESLRSHFEQWGTLLDGVVMRVPNTKHSRVFGFFAYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD--QEEDDLREYFSQ 129
D AM+ RPH +DGRVV KRAV R++ +P A+ TVK +FVGG+K+ +E L +YF Q
Sbjct: 69 DAAMNARPHKVDGRVVGPKRAVSREDSQRPGAHLTVKNIFVGGIKEDTEEHHHLIDYFEQ 128
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+G IE ++T++ +G KRGFAF+ F+D+D VDK+V+ K + E
Sbjct: 129 YGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKLVVQKYHAVNGHNCE 177
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDES-LQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
R D + +++ +F+GG+ T + L +FEQ+G+I +M D + + RGF F
Sbjct: 92 REDSQRPGAHLTVKNIFVGGIKEDTEEHHHLIDYFEQYGKIEVTEIMTDRGSGKKRGFAF 151
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD + + H ++G E ++ + + E+
Sbjct: 152 VTFDDHDSVDKLVVQKYHAVNGHNCEVRKVLSKQEM 187
>gi|402872594|ref|XP_003900193.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Papio
anubis]
Length = 303
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|332234557|ref|XP_003266473.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Nomascus
leucogenys]
Length = 306
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|348511912|ref|XP_003443487.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 301
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 111/166 (66%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ L K+F+GGL+ T D+ L+ FEQ+G + D VV+ + +RSR FGF+TYS + D
Sbjct: 3 DQLCKLFVGGLNVDTDDDGLRKHFEQYGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADA 62
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGT 132
AM+ RPH +DG VE KRAV R++ KPEA A VKK+FVGGLKD EE L EYFSQ+G
Sbjct: 63 AMAARPHTVDGNAVEVKRAVAREDANKPEALAKVKKIFVGGLKDDIEEQHLTEYFSQYGQ 122
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+E +++ KETG KRGF F+ F D+D DK V+ K + +VE
Sbjct: 123 VEKSEVISEKETGKKRGFGFVYFTDHDAADKAVVVKFHTVKGHKVE 168
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 10 CTEPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+PE+L +K+F+GGL ++ L +F Q+G++ V+ + T + RGFGF+ ++
Sbjct: 87 ANKPEALAKVKKIFVGGLKDDIEEQHLTEYFSQYGQVEKSEVISEKETGKKRGFGFVYFT 146
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A+ + H + G VE K+A+ + E+
Sbjct: 147 DHDAADKAVVVKFHTVKGHKVEVKKALTKQEM 178
>gi|296490076|tpg|DAA32189.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 361
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 117/168 (69%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+FIG L TT+ESL ++ QWG + D V+++DP +++SR FGFIT+S +
Sbjct: 16 ENEQFCKLFIGDLSSETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAEL 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQF 130
D AM+ RPH IDG++V KRAVPR++ GK A TVKK+FVGG+ +D +E LR+YF ++
Sbjct: 76 DAAMAARPHFIDGKMVMPKRAVPREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEKY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I ++ +VT+ ++G KRGF FI F+D+D VDKIVL K + R E
Sbjct: 136 GKINAIEIVTDGQSGKKRGFGFITFDDHDPVDKIVLQKNHTINGHRAE 183
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D K +++K+F+GG+ + L+ +FE++G+I + ++ D + + RGFGF
Sbjct: 98 PREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEKYGKINAIEIVTDGQSGKKRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
IT+ + VD + + H I+G E ++A+ R E
Sbjct: 158 ITFDDHDPVDKIVLQKNHTINGHRAEVRKALSRQE 192
>gi|1911429|gb|AAB50657.1| A0=heterogeneous nuclear ribonucleoprotein [human, placenta,
Peptide, 305 aa]
Length = 305
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFETFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|410948433|ref|XP_003980944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Felis catus]
Length = 250
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|417409570|gb|JAA51284.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 309
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS + D AM
Sbjct: 11 LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAM 70
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE 134
+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQFGT+E
Sbjct: 71 AASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVE 130
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 131 KAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 174
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 90 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 149
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 150 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 184
>gi|348575081|ref|XP_003473318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Cavia
porcellus]
Length = 301
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GAVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|355705101|gb|EHH31026.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Macaca mulatta]
Length = 300
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 115/169 (68%), Gaps = 2/169 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP RK+FIG L + TT+ESL++ FEQWG ++D VVM+ P TK SR FGF Y+ + V
Sbjct: 9 EPNRQRKLFIGVLSFETTNESLRSHFEQWGTLLDGVVMRVPNTKHSRVFGFFAYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD--QEEDDLREYFSQ 129
D AM+ RPH +DGRVVE KRAV + +P A+ TVK +FVGG+K+ +E L +YF Q
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSVENSQRPGAHLTVKNIFVGGIKEDTEEHHHLIDYFEQ 128
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+G IE ++T++ +G KRGFAF+ F+D+D VDK+V+ K + E
Sbjct: 129 YGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKLVVQKYHAVNGHNCE 177
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 15 SLRKVFIGGLDYRTTDES-LQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+++ +F+GG+ T + L +FEQ+G+I +M D + + RGF F+T+ + VD
Sbjct: 103 TVKNIFVGGIKEDTEEHHHLIDYFEQYGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDK 162
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++ + + E+
Sbjct: 163 LVVQKYHAVNGHNCEVRKVLSKQEM 187
>gi|47214179|emb|CAF96980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 487
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ L K+F+GGL+ T D+ L+ FEQ+G + D VV+ + +RSR FGF+TYS + D
Sbjct: 2 DQLCKLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQVQRSRCFGFVTYSTPEEADS 61
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGT 132
AM+ RPH +DG VE KRAV R++ GKPEA A VKK+FVGGLK D EE+ L E+FSQFG
Sbjct: 62 AMAARPHTVDGNPVEVKRAVAREDAGKPEALAKVKKIFVGGLKDDTEENHLTEHFSQFGE 121
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
IE ++++KETG KRGF F+ F D D DK V+ K + +VE
Sbjct: 122 IEKAEVISDKETGKKRGFGFVYFVDQDSADKSVVIKFHTINGHKVE 167
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
Query: 38 EQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
+++G++ D VV+K+ RSR FGFITYS + D AM+ PH +DG VE KRAV R +
Sbjct: 279 QKYGQLSDCVVVKNKELGRSRCFGFITYSTPEEADSAMAASPHVVDGHNVELKRAVARQD 338
Query: 98 IGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 156
PE A VKK+FVGG++D E + L +YFSQFG +E ++++K TG KRGF F+ F
Sbjct: 339 ADNPEVLANVKKIFVGGVQDHVEAEHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFV 398
Query: 157 DYDVVDKIVLSKITLLLDRRVE 178
D D K VL++ + +VE
Sbjct: 399 DTDSATKAVLTRYHTISGNKVE 420
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE+L +K+F+GGL T + L F Q+GEI V+ D T + RGFGF+ + +
Sbjct: 88 KPEALAKVKKIFVGGLKDDTEENHLTEHFSQFGEIEKAEVISDKETGKKRGFGFVYFVDQ 147
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D ++ + H I+G VE K+A+ + E+
Sbjct: 148 DSADKSVVIKFHTINGHKVEVKKALTKQEL 177
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE L +K+F+GG+ E L +F Q+G + ++ D +T + RGFGF+ + +
Sbjct: 342 PEVLANVKKIFVGGVQDHVEAEHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFVDTD 401
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
A+ R H I G VE K+A+ + E+
Sbjct: 402 SATKAVLTRYHTISGNKVEAKKAMTKQEM 430
>gi|444723753|gb|ELW64388.1| Heterogeneous nuclear ribonucleoprotein A3 [Tupaia chinensis]
Length = 348
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD SL+ FE+WG + ++ P K SRGFGF+TY + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDGSLREHFEKWGHTHRLCGIERPPNKTSRGFGFMTYLCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM R H +DG VVE +RAV +++ KP A TVKK+FVGG+K D EE +LR+YF +F
Sbjct: 90 DAAMFARSHKVDGCVVEPRRAVSKEDSVKPGACLTVKKIFVGGIKEDIEEYNLRDYFEKF 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ + ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 150 GKIETIEVTKDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ + +L+ +FE++G+I + V KD + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDIEEYNLRDYFEKFGKIETIEVTKDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G + K+A+ + E+
Sbjct: 184 VVQKYHTINGHNCDVKKALSKQEM 207
>gi|291387384|ref|XP_002710273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Oryctolagus
cuniculus]
Length = 298
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GAVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|296192806|ref|XP_002744232.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Callithrix jacchus]
Length = 302
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K +G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKLSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D ++ + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKLSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|126290015|ref|XP_001367952.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Monodelphis domestica]
Length = 486
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 184 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 243
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 244 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLVEHFSQF 303
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F +D DK + K + RVE
Sbjct: 304 GTVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVE 351
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 267 REDSARPGAHAKVKKLFVGGLKGDVAEGDLVEHFSQFGTVEKAEIIADKQSGKKRGFGFV 326
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 327 YFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 361
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 99 GKPEA----NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
GK EA N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+
Sbjct: 176 GKAEAAEMENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFV 235
Query: 154 EFNDYDVVDKIVLS 167
+++ + D + +
Sbjct: 236 TYSNVEEADAAMAA 249
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 114/169 (67%), Gaps = 1/169 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
TE E LRK+FIGG+ Y TTDES+ +F ++G+I D VV+KD T RS+GFGF+T+
Sbjct: 7 TEEEQLRKLFIGGISYETTDESMNDYFSKYGKIEDCVVIKDSSTGRSKGFGFVTFETEAE 66
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 129
D M +RPH ++ R ++ KRAV R+E KP A+ VKK+F+GGLKD +E +L+EYF Q
Sbjct: 67 ADACMDDRPHTLNSRQIDVKRAVSREESVKPGAHFQVKKIFIGGLKDGCDETNLKEYFGQ 126
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FGTIE+ + +++ RGFAFI F D+D VDK+V + + R E
Sbjct: 127 FGTIETFELPLERDSEKPRGFAFITFEDHDTVDKLVAKRHHYVNGVRCE 175
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+FIGGL + +L+ +F Q+G I + + +++ RGF FIT+ + VD +
Sbjct: 103 VKKIFIGGLKDGCDETNLKEYFGQFGTIETFELPLERDSEKPRGFAFITFEDHDTVDKLV 162
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKK 109
+ R H ++G E K+A+ + E+ K + K+
Sbjct: 163 AKRHHYVNGVRCEVKKALSKAEMEKAKTQVESKR 196
>gi|226443091|ref|NP_084148.1| heterogeneous nuclear ribonucleoprotein A0 [Mus musculus]
gi|81916834|sp|Q9CX86.1|ROA0_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A0;
Short=hnRNP A0
gi|12859567|dbj|BAB31694.1| unnamed protein product [Mus musculus]
Length = 305
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 110/168 (65%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +E ++ +K++G KRGF F+ F +D DK + K + RVE
Sbjct: 122 GAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVE 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|392354145|ref|XP_003751688.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Rattus
norvegicus]
Length = 307
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 110/168 (65%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +E ++ +K++G KRGF F+ F +D DK + K + RVE
Sbjct: 122 GAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVE 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|432876616|ref|XP_004073061.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ L K+F+GGL+ T D+ L+ FEQ+G + D VV+ + +RSR FGF+TYS + D
Sbjct: 3 DQLCKLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADA 62
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGT 132
AM+ RPH +DG VE KRAV R++ +PEA A VKK+FVGGLKD EED L +YFSQ+G
Sbjct: 63 AMAARPHTVDGNAVEVKRAVAREDANRPEALAKVKKIFVGGLKDDIEEDHLTDYFSQYGE 122
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+E +++ KETG KRGF F+ F D+D DK V+ K + +VE
Sbjct: 123 VEKSEVISEKETGKKRGFGFVYFTDHDSADKAVVVKFHTVNGHKVE 168
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE+L +K+F+GGL ++ L +F Q+GE+ V+ + T + RGFGF+ +++
Sbjct: 90 PEALAKVKKIFVGGLKDDIEEDHLTDYFSQYGEVEKSEVISEKETGKKRGFGFVYFTDHD 149
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H ++G VE K+A+ + E+
Sbjct: 150 SADKAVVVKFHTVNGHKVEVKKALTKQEM 178
>gi|403285634|ref|XP_003934122.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Saimiri
boliviensis boliviensis]
Length = 258
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K +G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKLSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D ++ + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKLSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|440897852|gb|ELR49462.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 349
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 115/168 (68%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+FIG L TT+ESL ++ QWG + D V+++DP +++SR FGFIT+S +
Sbjct: 15 ENEQFCKLFIGDLSSETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAEL 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQF 130
D AM+ RPH IDG++V KRAVPR++ GK A TVKK+FVGG+ +D +E LR+YF ++
Sbjct: 75 DAAMAARPHFIDGKMVMPKRAVPREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEKY 134
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I ++ +VT+ ++G KRGF FI F D+D VDKIVL K + E
Sbjct: 135 GKINAIEIVTDGQSGKKRGFGFITFEDHDPVDKIVLQKNHTINGHHAE 182
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D K +++K+F+GG+ + L+ +FE++G+I + ++ D + + RGFGF
Sbjct: 97 PREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEKYGKINAIEIVTDGQSGKKRGFGF 156
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
IT+ + VD + + H I+G E ++A+ R E
Sbjct: 157 ITFEDHDPVDKIVLQKNHTINGHHAEVRKALSRQE 191
>gi|410914419|ref|XP_003970685.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 358
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ L K+F+GGL+ T D+ L+ FEQ+G + D VV+ + +RSR FGF+TYS + D
Sbjct: 56 DQLCKLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQVQRSRCFGFVTYSSPEEADS 115
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGT 132
AM+ RPH +DG VE KRAV R++ GKPEA A VKK+FVGGLKD ED+ L E+FSQFG
Sbjct: 116 AMAARPHTVDGNPVEVKRAVAREDAGKPEALAKVKKIFVGGLKDDTEDNHLLEHFSQFGE 175
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
IE ++++K++G KRGF F+ F D D DK V+ K + +VE
Sbjct: 176 IEKAEVISDKDSGKKRGFGFVYFVDQDSADKSVVIKFHTINGHKVE 221
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE+L +K+F+GGL T D L F Q+GEI V+ D + + RGFGF+ + +
Sbjct: 142 KPEALAKVKKIFVGGLKDDTEDNHLLEHFSQFGEIEKAEVISDKDSGKKRGFGFVYFVDQ 201
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D ++ + H I+G VE K+A+ + E+
Sbjct: 202 DSADKSVVIKFHTINGHKVEVKKALTKQEL 231
>gi|440910144|gb|ELR59970.1| hypothetical protein M91_04889, partial [Bos grunniens mutus]
Length = 359
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+F+GGL TT+E+L ++ QWG + D VV++DP ++ SR F F+T+S VD
Sbjct: 28 EKFRKLFVGGLSSETTEETLWNYYRQWGYLTDCVVIRDPASQTSRRFAFVTFSSMAEVDA 87
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
AM+ RPH+IDG+ V KRAVPR++ G P A TVKK+FV + +D E+ LR+YF ++G
Sbjct: 88 AMAARPHSIDGKRVAPKRAVPREDYGIPGALVTVKKLFVCKIGEDTEKHHLRDYFGKYGK 147
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I ++ +++++E+G KRGF F+ F+D+D VDK+VL K + E
Sbjct: 148 INAIEIISDRESGRKRGFGFVTFDDHDPVDKLVLQKYHTINGHHAE 193
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 50/86 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+ + T L+ +F ++G+I + ++ D + R RGFGF+T+ + VD
Sbjct: 120 TVKKLFVCKIGEDTEKHHLRDYFGKYGKINAIEIISDRESGRKRGFGFVTFDDHDPVDKL 179
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGK 100
+ + H I+G E ++A+ R E+ K
Sbjct: 180 VLQKYHTINGHHAEVRKALSRPEMQK 205
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 104 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
N +K+FVGGL + E+ L Y+ Q+G + ++ + + R FAF+ F+ VD
Sbjct: 27 NEKFRKLFVGGLSSETTEETLWNYYRQWGYLTDCVVIRDPASQTSRRFAFVTFSSMAEVD 86
Query: 163 KIVLSKITLLLDRRV 177
+ ++ + +RV
Sbjct: 87 AAMAARPHSIDGKRV 101
>gi|195144344|ref|XP_002013156.1| GL23972 [Drosophila persimilis]
gi|194102099|gb|EDW24142.1| GL23972 [Drosophila persimilis]
Length = 351
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 112/159 (70%), Gaps = 4/159 (2%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +TT E+L+ FF ++G + D VVM+DP++ SRGFGF+T+ + V++
Sbjct: 72 EHLRKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGFGFVTFVDPGSVEN 131
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPE--ANATVKKMFVGGLKD-QEEDDLREYFSQF 130
S RPH ID + VETK A+PR E KP N K+F+GGLKD +E +R+YFS+F
Sbjct: 132 VQSTRPHIIDCKTVETKPALPRLEFNKPPGMGNGQTNKIFLGGLKDCHDEPMIRDYFSKF 191
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK-IVLSK 168
GT+ SV ++ +KETG KRGF F+EF D D ++ +VLSK
Sbjct: 192 GTVMSVKVLIDKETGRKRGFGFLEFGDIDSAERALVLSK 230
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + ++ +F ++G ++ V V+ D T R RGFGF+ + + + A+
Sbjct: 169 KIFLGGLKDCHDEPMIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFGDIDSAERALVL 228
Query: 78 RPHNIDGRVVETKRAVPR 95
H I+ VE K++ R
Sbjct: 229 SKHVINFITVEVKKSTQR 246
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL Q + LRE+FS+FG + ++ + + RGF F+ F D V+ +
Sbjct: 74 LRKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGFGFVTFVDPGSVENVQ 133
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 134 STRPHIIDCKTVE 146
>gi|119894797|ref|XP_580324.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos
taurus]
gi|297476672|ref|XP_002688896.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos
taurus]
gi|296485860|tpg|DAA27975.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 372
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RK+F+GGL TT+E+L ++ QWG + D VV++DP ++ SR F F+T+S VD
Sbjct: 26 EKFRKLFVGGLSSETTEETLWNYYRQWGYLTDCVVIRDPASQTSRRFAFVTFSSMAEVDA 85
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
AM+ RPH+IDG+ V KRAVPR++ G P A TVKK+FV + +D E+ LR+YF ++G
Sbjct: 86 AMAARPHSIDGKRVAPKRAVPREDYGIPGALVTVKKLFVCKIGEDTEKHHLRDYFGKYGK 145
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I ++ +++++E+G KRGF F+ F+D+D VDK+VL K + E
Sbjct: 146 INAIEIISDRESGRKRGFGFVTFDDHDPVDKLVLQKYHTINGHHAE 191
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 49/84 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+ + T L+ +F ++G+I + ++ D + R RGFGF+T+ + VD
Sbjct: 118 TVKKLFVCKIGEDTEKHHLRDYFGKYGKINAIEIISDRESGRKRGFGFVTFDDHDPVDKL 177
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 178 VLQKYHTINGHHAEVRKALSRPEM 201
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 104 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
N +K+FVGGL + E+ L Y+ Q+G + ++ + + R FAF+ F+ VD
Sbjct: 25 NEKFRKLFVGGLSSETTEETLWNYYRQWGYLTDCVVIRDPASQTSRRFAFVTFSSMAEVD 84
Query: 163 KIVLSKITLLLDRRV 177
+ ++ + +RV
Sbjct: 85 AAMAARPHSIDGKRV 99
>gi|118097545|ref|XP_414620.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Gallus
gallus]
Length = 307
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 110/168 (65%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +TT+ L+ F +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ KP A+A VKK+FVGGLK D E DL ++FSQF
Sbjct: 62 DAAMAASPHAVDGNSVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQFGPVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|198452963|ref|XP_002137572.1| GA26466 [Drosophila pseudoobscura pseudoobscura]
gi|198132154|gb|EDY68130.1| GA26466 [Drosophila pseudoobscura pseudoobscura]
Length = 354
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 112/159 (70%), Gaps = 4/159 (2%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +TT E+L+ FF ++G + D VVM+DP++ SRGFGF+T+ + V++
Sbjct: 10 EHLRKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGFGFVTFVDPGSVEN 69
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPE--ANATVKKMFVGGLKD-QEEDDLREYFSQF 130
S RPH ID + VETK A+PR E KP N K+F+GGLKD +E +R+YFS+F
Sbjct: 70 VQSTRPHIIDCKTVETKPALPRLEFNKPPGMGNGQTNKIFLGGLKDCHDEPMIRDYFSKF 129
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK-IVLSK 168
GT+ SV ++ +KETG KRGF F+EF D D ++ +VLSK
Sbjct: 130 GTVMSVKVLIDKETGRKRGFGFLEFEDIDSAERALVLSK 168
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + ++ +F ++G ++ V V+ D T R RGFGF+ + + + A+
Sbjct: 107 KIFLGGLKDCHDEPMIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFEDIDSAERALVL 166
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
H I+ VE K++ R + GK
Sbjct: 167 SKHVINFIAVEVKKSTQRPDPGK 189
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 107 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++K+F+GGL Q + LRE+FS+FG + ++ + + RGF F+ F D V+ +
Sbjct: 12 LRKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGFGFVTFVDPGSVENVQ 71
Query: 166 LSKITLLLDRRVE 178
++ ++ + VE
Sbjct: 72 STRPHIIDCKTVE 84
>gi|326928626|ref|XP_003210477.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Meleagris gallopavo]
Length = 190
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 110/168 (65%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +TT+ L+ F +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ KP A+A VKK+FVGGLK D E DL ++FSQF
Sbjct: 62 DAAMAASPHAVDGNSVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQFGPVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|324514790|gb|ADY45988.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 319
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 110/157 (70%), Gaps = 5/157 (3%)
Query: 23 GLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNI 82
G+ + DE F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MVD+AM+NRPH +
Sbjct: 6 GVQQQQQDE----FYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHIV 61
Query: 83 DGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTN 141
DG+ V+ KRAVPRD + EAN + K+++V G++++ E L EYF +FGT+ ++ +
Sbjct: 62 DGKTVDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIIND 121
Query: 142 KETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
K TG RGFAFI F+DYD VDK VL K + + R +
Sbjct: 122 KNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCD 158
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 3 PRYDDSKCTEPE-SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D S+ TE S +++++ G+ T++ L+ +F ++G ++ ++ D T + RGF
Sbjct: 73 PR-DASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFA 131
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
FIT+ + VD + + H I + K+A+ ++E+ K +
Sbjct: 132 FITFDDYDPVDKCVLLKSHQISNFRCDVKKALSKEEMAKAQ 172
>gi|268553541|ref|XP_002634757.1| C. briggsae CBR-HRP-1 protein [Caenorhabditis briggsae]
Length = 337
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE+LRK+F+GGL TTD+ ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T++ V
Sbjct: 10 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEV 69
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM +PH IDG+ V+ KRAVPRD+ + E+N + K+++V G++ D E+ L +YFS++
Sbjct: 70 DAAM-KQPHVIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEEMLSDYFSKY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+ ++ +K T RGF F+ +D+D VD+ VL K ++ R +
Sbjct: 129 GTVTKSEIILDKATQKPRGFGFVT-DDHDCVDQCVLQKSHMVNGHRCD 175
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S +++++ G+ T+E L +F ++G + ++ D T++ RGFGF
Sbjct: 91 PRDDKNRSESNVSTKRLYVSGVREDHTEEMLSDYFSKYGTVTKSEIILDKATQKPRGFGF 150
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
+T + VD + + H ++G + ++ + +DE+ K +
Sbjct: 151 VT-DDHDCVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 189
>gi|12845960|dbj|BAB26973.1| unnamed protein product [Mus musculus]
Length = 139
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNK 142
G IE++ ++ ++
Sbjct: 128 GKIETIEVMEDR 139
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|109102812|ref|XP_001104065.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 258
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+F GGL + TTDES+++ EQWG ++D VVM+DP TK SR F F+TY+ + V
Sbjct: 9 EPQQLRKLFSGGLRFETTDESVRSHCEQWGMLMDCVVMRDPNTKCSRSFEFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQF 130
D A++ RPH +DGRV+E KR V R++ + A+ TVKK+FVGG+ +D EE LR+YF QF
Sbjct: 69 DAAINARPHKVDGRVMEPKRPVSREDYERSGAHLTVKKIFVGGINEDTEEHHLRDYFEQF 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+ ++T++ + KR F F+ F+D+D DK V+ K
Sbjct: 129 GKIKMTEIMTDQGSDKKRDFDFVTFDDHDSRDKTVIKK 166
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 50/85 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG++ T + L+ +FEQ+G+I +M D + + R F F+T+ + D
Sbjct: 103 TVKKIFVGGINEDTEEHHLRDYFEQFGKIKMTEIMTDQGSDKKRDFDFVTFDDHDSRDKT 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIG 99
+ + H ++G E ++A+ + E+
Sbjct: 163 VIKKYHAVNGHNCEVRKALSKREMA 187
>gi|444725708|gb|ELW66264.1| 60S ribosomal protein L7a [Tupaia chinensis]
Length = 536
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 110/149 (73%), Gaps = 1/149 (0%)
Query: 21 IGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPH 80
+G + +SL++ FEQWG + D +VM+DP +KRSRGFGF+TY+ + VD AM+ RPH
Sbjct: 256 VGNIPPEWEGKSLRSHFEQWGTLTDCMVMRDPNSKRSRGFGFVTYATVEEVDAAMNARPH 315
Query: 81 NIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMV 139
+DGRVVE KRAV R++ + A TVKK+FVGG+K+ EE LR+YF Q+ IE + ++
Sbjct: 316 KVDGRVVEPKRAVSREDSQRLGAYLTVKKIFVGGIKEGTEEHHLRDYFEQYDKIEVIEIM 375
Query: 140 TNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
T++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 376 TDRDSGKKRGFAFVAFDDHDSVDKIVIQK 404
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+ +I + +M D + + RGF F+
Sbjct: 330 REDSQRLGAYLTVKKIFVGGIKEGTEEHHLRDYFEQYDKIEVIEIMTDRDSGKKRGFAFV 389
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
+ + VD + + H ++G E ++ + + EI + VK
Sbjct: 390 AFDDHDSVDKIVIQKYHTVNGHNCEVRKVLSKQEIASGSSTQEVK 434
>gi|209733364|gb|ACI67551.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 261
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ T D+ L+ FEQ+G++ D VV+ + +RSR FGF+TYS A+ D AM
Sbjct: 7 LCKLFVGGLNVDTDDDGLRKHFEQYGQLTDCVVVVNKQLQRSRCFGFVTYSSAEEADAAM 66
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIE 134
+ RPH +DG VE KRAV R++ GKPEA A VKK+F+GGLKD ED+ L EYFSQFG IE
Sbjct: 67 AARPHVVDGTNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIE 126
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ KETG KRGF F+ F D D DK V+ K + +VE
Sbjct: 127 KAEVIAEKETGKKRGFGFVHFTDNDSADKAVVLKFHNINGHKVE 170
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE+L +K+FIGGL DE L +F Q+GEI V+ + T + RGFGF+ +++
Sbjct: 91 KPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIEKAEVIAEKETGKKRGFGFVHFTDN 150
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + HNI+G VE K+A+ + E+
Sbjct: 151 DSADKAVVLKFHNINGHKVEVKKALTKQEM 180
>gi|344251072|gb|EGW07176.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 175
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 112/162 (69%), Gaps = 1/162 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK FIGGL + TD+ L+ F +WG + D VVM+D K +GFGF+TYS + V
Sbjct: 8 EPEQLRKPFIGGLGFEATDDCLREHFVKWGTLTDCVVMRDSPNKMFQGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A+ + H +DG VVETKR + R++ KP A VKKMFVGG++ D EE +LR+YF ++
Sbjct: 68 DAAVCAQSHEVDGHVVETKRTISREDSVKPGACLAVKKMFVGGIREDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
G IE++ ++ ++++ KRGFA + F+D+D VDKIV+ K +
Sbjct: 128 GKIETIEVMEDRQSRKKRGFARVTFDDHDTVDKIVVQKCHTI 169
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 48/74 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D +++ RGF +T+ + VD
Sbjct: 102 AVKKMFVGGIREDTEEYNLRDYFEKYGKIETIEVMEDRQSRKKRGFARVTFDDHDTVDKI 161
Query: 75 MSNRPHNIDGRVVE 88
+ + H I+G V+
Sbjct: 162 VVQKCHTINGHNVK 175
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K F+GGL + DD LRE+F ++GT+ ++ + +GF F+ ++ +
Sbjct: 6 PKEPEQLRKPFIGGLGFEATDDCLREHFVKWGTLTDCVVMRDSPNKMFQGFGFVTYSCVE 65
Query: 160 VVDKIVLSK 168
VD V ++
Sbjct: 66 EVDAAVCAQ 74
>gi|355745396|gb|EHH50021.1| hypothetical protein EGM_00780, partial [Macaca fascicularis]
Length = 263
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L+K+FIG L + TDESL+ E WG + D V +DP TK SRGFGF+TY+ + V
Sbjct: 6 EPEQLQKLFIGRLGFEITDESLRKHSEPWGILKDYVERRDPKTKSSRGFGFVTYATVEEV 65
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ + A VKK+FVGG+K D EE LR+Y Q+
Sbjct: 66 DAAMNARPHKLDGRVVEPKRAVSREDSQRSGARLAVKKIFVGGIKEDTEEHHLRDYSEQY 125
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G E ++T++ + KRGFAFI F+D+D VDK V+ K + E
Sbjct: 126 GKTEVTEIMTDRGSVKKRGFAFIPFDDHDFVDKTVIQKFHTVNGHNCE 173
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ + EQ+G+ +M D + + RGF FI
Sbjct: 89 REDSQRSGARLAVKKIFVGGIKEDTEEHHLRDYSEQYGKTEVTEIMTDRGSVKKRGFAFI 148
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDL 123
+ + VD + + H ++G E ++A+ + E+ ++ T + G +D
Sbjct: 149 PFDDHDFVDKTVIQKFHTVNGHNCEVRKAL-KQEMANVSSSQTGQNCSGNGGGGGSYNDF 207
Query: 124 REY---FSQFGTIESVNM 138
Y FS FG ++ N
Sbjct: 208 GNYHNQFSNFGPMKGRNF 225
>gi|195451838|ref|XP_002073097.1| GK13335 [Drosophila willistoni]
gi|194169182|gb|EDW84083.1| GK13335 [Drosophila willistoni]
Length = 415
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 112/163 (68%), Gaps = 5/163 (3%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +TT E+L+ +F Q+GE+VD VVM+DP++ SRGF F+TY + V++
Sbjct: 39 EHLRKIFIGGLSTQTTVETLRQYFRQFGEMVDAVVMRDPVSNHSRGFAFVTYLSPESVEN 98
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEA---NATVKKMFVGGLKD-QEEDDLREYFSQ 129
RPH ID + VETKRA+PR E + A N K+F+GGL+D E+ +REYFSQ
Sbjct: 99 VQRARPHTIDNKDVETKRALPRMEFTRSSAGQSNIRSAKIFLGGLRDCHSEESIREYFSQ 158
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK-IVLSKITL 171
FG + SV ++ +KETG KRGF F+EF D D+ +V SK ++
Sbjct: 159 FGIVTSVKLLLDKETGRKRGFGFLEFKDLASADRALVQSKHSI 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++ES++ +F Q+G + V ++ D T R RGFGF+ + + D A+
Sbjct: 137 KIFLGGLRDCHSEESIREYFSQFGIVTSVKLLLDKETGRKRGFGFLEFKDLASADRALVQ 196
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
H+I+ +VE K++ + + GK
Sbjct: 197 SKHSINYSLVEVKKSSQKYDTGK 219
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 102 EANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 160
E++ ++K+F+GGL Q + LR+YF QFG + ++ + + RGFAF+ + +
Sbjct: 36 ESDEHLRKIFIGGLSTQTTVETLRQYFRQFGEMVDAVVMRDPVSNHSRGFAFVTYLSPES 95
Query: 161 VDKIVLSKITLLLDRRVE 178
V+ + ++ + ++ VE
Sbjct: 96 VENVQRARPHTIDNKDVE 113
>gi|351700354|gb|EHB03273.1| Heterogeneous nuclear ribonucleoprotein A0 [Heterocephalus glaber]
Length = 176
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ ++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQS---GLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 58
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 59 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 118
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 119 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 166
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 82 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 141
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVET 89
+ D A + H I G VE
Sbjct: 142 YFQNHDAADKAAVVKFHPIQGHRVEV 167
>gi|157929888|gb|ABW04132.1| Hnrpa01 protein [Epinephelus coioides]
Length = 329
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 117/164 (71%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ +TT++ L+ FEQ+G++ D VV+++ +RSR FGF+TYS A+ D AM
Sbjct: 10 LCKLFVGGLNVQTTNDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYSTAEEADAAM 69
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIE 134
+ RPH +DG VE KRAV R++ G+PEA A VKK+F+GGLKD ED+ L EYFSQ+G IE
Sbjct: 70 AARPHVVDGNNVELKRAVAREDAGRPEALAKVKKIFIGGLKDDVEDEHLHEYFSQYGVIE 129
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++++K+TG KRGF F+ F D D DK V+ K + +VE
Sbjct: 130 KAEVISDKQTGKKRGFGFVYFEDNDSADKAVVLKYHTINGHKVE 173
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE+L +K+FIGGL DE L +F Q+G I V+ D T + RGFGF+ + +
Sbjct: 95 PEALAKVKKIFIGGLKDDVEDEHLHEYFSQYGVIEKAEVISDKQTGKKRGFGFVYFEDND 154
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H I+G VE K+A+ + E+
Sbjct: 155 SADKAVVLKYHTINGHKVEVKKALTKQEM 183
>gi|209155454|gb|ACI33959.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 299
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ TTD+ L+ FEQ+G++ D VV+++ +RSR FGF+TYS A+ D AM
Sbjct: 5 LCKLFVGGLNVETTDDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYSSAEEADAAM 64
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIE 134
+ RPH +DG VE KRAV R++ G+PEA A VKK+F+GGLKD EDD L +YFSQFG IE
Sbjct: 65 AARPHVVDGTNVELKRAVAREDAGRPEALAKVKKIFIGGLKDDIEDDHLNDYFSQFGAIE 124
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++++K+T KRGF F+ F D D DK V+ K + +VE
Sbjct: 125 KAEVISDKQTLKKRGFGFVYFEDNDSADKAVVLKFHTINGHKVE 168
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE+L +K+FIGGL D+ L +F Q+G I V+ D T + RGFGF+ + +
Sbjct: 90 PEALAKVKKIFIGGLKDDIEDDHLNDYFSQFGAIEKAEVISDKQTLKKRGFGFVYFEDND 149
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H I+G VE K+A+ + E+
Sbjct: 150 SADKAVVLKFHTINGHKVEVKKALTKQEM 178
>gi|195113431|ref|XP_002001271.1| GI10693 [Drosophila mojavensis]
gi|193917865|gb|EDW16732.1| GI10693 [Drosophila mojavensis]
Length = 420
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 102/148 (68%), Gaps = 4/148 (2%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+F+GGL TT ++++ FF Q+G + D VVM+DPI+ RSRGFGF+TY E V++
Sbjct: 45 EHLRKIFVGGLSINTTADTMRQFFSQFGVVSDAVVMRDPISNRSRGFGFVTYVEPGSVEN 104
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKP---EANATVKKMFVGGLKD-QEEDDLREYFSQ 129
RPH ID + V+TKRA PR E K +N K+F+GGLKD +E LREYFSQ
Sbjct: 105 VQRARPHIIDSKTVDTKRAFPRHEFNKAIGHLSNIKTNKIFLGGLKDCHDESTLREYFSQ 164
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFND 157
FG I SV ++ +KETG KRGF F+EF D
Sbjct: 165 FGAINSVKVLLDKETGRKRGFGFLEFED 192
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + +L+ +F Q+G I V V+ D T R RGFGF+ + + A++
Sbjct: 143 KIFLGGLKDCHDESTLREYFSQFGAINSVKVLLDKETGRKRGFGFLEFEDTASAGRALAQ 202
Query: 78 RPHNIDGRVVETKRAV 93
H+I VE K++
Sbjct: 203 SKHSIKMATVEVKKST 218
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 95 RDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
+ + E N ++K+FVGGL + D +R++FSQFG + ++ + + RGF F+
Sbjct: 35 QSSVNASENNEHLRKIFVGGLSINTTADTMRQFFSQFGVVSDAVVMRDPISNRSRGFGFV 94
Query: 154 EFNDYDVVDKIVLSKITLLLDRRVE 178
+ + V+ + ++ ++ + V+
Sbjct: 95 TYVEPGSVENVQRARPHIIDSKTVD 119
>gi|209148043|gb|ACI32918.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 300
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ TTD+ L+ FEQ+G++ D VV+++ +RSR FGF+TYS A+ D AM
Sbjct: 5 LCKLFVGGLNVETTDDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYSSAEEADAAM 64
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIE 134
+ RPH +DG VE KRAV R++ G+PEA A VKK+F+GGLKD ED+ L +YFSQFG IE
Sbjct: 65 AARPHVVDGTNVELKRAVAREDAGRPEALAKVKKIFIGGLKDDIEDEHLNDYFSQFGAIE 124
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++++KET KRGF F+ F D D DK V+ K + +VE
Sbjct: 125 KAEVISDKETFKKRGFGFVYFEDNDSADKAVVLKFHTINGHKVE 168
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE+L +K+FIGGL DE L +F Q+G I V+ D T + RGFGF+ + +
Sbjct: 90 PEALAKVKKIFIGGLKDDIEDEHLNDYFSQFGAIEKAEVISDKETFKKRGFGFVYFEDND 149
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H I+G VE K+A+ + E+
Sbjct: 150 SADKAVVLKFHTINGHKVEVKKALTKQEM 178
>gi|194741288|ref|XP_001953121.1| GF17369 [Drosophila ananassae]
gi|190626180|gb|EDV41704.1| GF17369 [Drosophila ananassae]
Length = 419
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 106/163 (65%), Gaps = 11/163 (6%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +TT E+++ FF Q+G + D VVM+DP+T SRGFGF+TY + V++
Sbjct: 45 EHLRKIFIGGLSTQTTVETVREFFRQFGAVADAVVMRDPMTNHSRGFGFVTYVDGNSVEN 104
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANAT----------VKKMFVGGLKD-QEEDD 122
PH+ID + VETKRA+PR E KP A K+F+GGLKD +E
Sbjct: 105 VQRAGPHSIDNKTVETKRALPRHEFLKPGGGAGNSIGAMTGVKSNKIFLGGLKDCHDESS 164
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+REYFSQFG I SV ++ +K+TG KRGF F+EF D D+ +
Sbjct: 165 IREYFSQFGGITSVKLLLDKDTGRKRGFGFLEFEDSASADQAL 207
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + S++ +F Q+G I V ++ D T R RGFGF+ + ++ D A++
Sbjct: 150 KIFLGGLKDCHDESSIREYFSQFGGITSVKLLLDKDTGRKRGFGFLEFEDSASADQALAQ 209
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
H I+ VE K++ + + GK
Sbjct: 210 GKHTINMTTVEVKKSTQKPDPGK 232
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 102 EANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 160
E + ++K+F+GGL Q + +RE+F QFG + ++ + T RGF F+ + D +
Sbjct: 42 EGDEHLRKIFIGGLSTQTTVETVREFFRQFGAVADAVVMRDPMTNHSRGFGFVTYVDGNS 101
Query: 161 VDKIVLSKITLLLDRRVE 178
V+ + + + ++ VE
Sbjct: 102 VENVQRAGPHSIDNKTVE 119
>gi|402877500|ref|XP_003902463.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2-like
[Papio anubis]
Length = 344
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 113/169 (66%), Gaps = 4/169 (2%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG-FITYSEAKM 70
EPE LRK+FIG L + TT+ESL++ EQWG VV++DP TK SR FG I +S
Sbjct: 74 EPEQLRKLFIGRLSFETTNESLRSHSEQWGMFPGCVVVRDPNTKLSRAFGSHICHSGGGG 133
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+ F Q
Sbjct: 134 C--AMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGVKEDTEEHHLRDDFEQ 191
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+G IE + ++T++ +G KRGFAF F+D+D VDK V+ K + E
Sbjct: 192 YGKIEVIEIMTDRGSGKKRGFAFDTFDDHDSVDKTVIQKCHTVNGHSCE 240
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 49/84 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ FEQ+G+I + +M D + + RGF F T+ + VD
Sbjct: 167 TVKKIFVGGVKEDTEEHHLRDDFEQYGKIEVIEIMTDRGSGKKRGFAFDTFDDHDSVDKT 226
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++ + + E+
Sbjct: 227 VIQKCHTVNGHSCEVRKTLSKQEM 250
>gi|195036932|ref|XP_001989922.1| GH19059 [Drosophila grimshawi]
gi|193894118|gb|EDV92984.1| GH19059 [Drosophila grimshawi]
Length = 391
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 103/148 (69%), Gaps = 4/148 (2%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LR++F+GGL TT E+++ FF Q+G++ D +VM+DPI+ RSR FGF+T+ EA V++
Sbjct: 44 EHLRRIFVGGLSLNTTAETMRHFFSQFGDVADAIVMRDPISNRSRCFGFVTFVEAASVEN 103
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPE---ANATVKKMFVGGLKD-QEEDDLREYFSQ 129
RPH +DG+ VETKRA PR + K +N K+F+GGL+D +E LREYF+Q
Sbjct: 104 VQRTRPHIVDGKTVETKRAFPRHQFSKSMGHLSNIRTNKIFIGGLRDCHDETTLREYFAQ 163
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFND 157
FG I SV ++ +KETG RGF F+EF D
Sbjct: 164 FGNINSVKVLLDKETGRIRGFGFLEFED 191
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 3 PRYDDSKCTEPES---LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRG 59
PR+ SK S K+FIGGL + +L+ +F Q+G I V V+ D T R RG
Sbjct: 124 PRHQFSKSMGHLSNIRTNKIFIGGLRDCHDETTLREYFAQFGNINSVKVLLDKETGRIRG 183
Query: 60 FGFITYSEAKMVDDAMSNRPHNIDGRVVETKR 91
FGF+ + + A+ H I ++VE K+
Sbjct: 184 FGFLEFEDIASAARALGQGKHLIGCKMVEVKK 215
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 70 MVDDAMSNRPHNIDGRVVE---TKRAVPRDEIGKP-----EANATVKKMFVGGLK-DQEE 120
MV+++ +N+P + R + + A+ ++G+ E + ++++FVGGL +
Sbjct: 1 MVNNSNNNKPFCQEMRKMGGCFSGAAIVSSDLGQSGDIESENSEHLRRIFVGGLSLNTTA 60
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+ +R +FSQFG + ++ + + R F F+ F + V+ + ++ ++ + VE
Sbjct: 61 ETMRHFFSQFGDVADAIVMRDPISNRSRCFGFVTFVEAASVENVQRTRPHIVDGKTVE 118
>gi|348511819|ref|XP_003443441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 317
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 111/169 (65%), Gaps = 1/169 (0%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
T L K+F+GGL+ TTDE L+ +FEQ+G + D VV+ + RSR FGFITYS +
Sbjct: 27 TMTSKLCKLFVGGLNVETTDEGLRKYFEQYGTLSDCVVVMNQQLGRSRCFGFITYSTPEE 86
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 129
D AM+ +PH ++G VE KRA+ R++ P+ A VKK+FVGG+KD E++L EYFSQ
Sbjct: 87 ADAAMAAKPHVVEGNNVEVKRAIAREDANNPDILANVKKIFVGGVKDHIVEENLTEYFSQ 146
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG +E ++++K+TG KRGF F+ F D D K VL+K + +VE
Sbjct: 147 FGAVEKAEIISDKQTGRKRGFGFVFFEDTDSATKAVLTKYHTINGNKVE 195
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ +E+L +F Q+G + ++ D T R RGFGF+ + + A
Sbjct: 122 NVKKIFVGGVKDHIVEENLTEYFSQFGAVEKAEIISDKQTGRKRGFGFVFFEDTDSATKA 181
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G VE K+A+ + E+
Sbjct: 182 VLTKYHTINGNKVEVKKALTKQEM 205
>gi|432876614|ref|XP_004073060.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 302
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ TTDE L+ +FEQ+G + D VV+ + RSR FGFITYS + D AM
Sbjct: 5 LCKLFVGGLNVETTDEGLRKYFEQYGALTDCVVVMNQQLGRSRCFGFITYSAPEEADAAM 64
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIE 134
+ +PH ++G VE KRA+ R++ P+ A VKK+FVGG+KD E ++L EYFSQFG +E
Sbjct: 65 AAKPHVVEGNNVELKRAIAREDANNPDIVANVKKIFVGGVKDHVEAENLTEYFSQFGRVE 124
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++++K+TG KRGF F+ F D D K L+K + +VE
Sbjct: 125 KSEIISDKQTGRKRGFGFVYFEDTDSATKAALAKYHTISGNKVE 168
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ E+L +F Q+G + ++ D T R RGFGF+ + + A
Sbjct: 95 NVKKIFVGGVKDHVEAENLTEYFSQFGRVEKSEIISDKQTGRKRGFGFVYFEDTDSATKA 154
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ H I G VE K+A+ + EI
Sbjct: 155 ALAKYHTISGNKVEVKKALTKQEI 178
>gi|441642329|ref|XP_004090435.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Nomascus leucogenys]
Length = 503
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 108/158 (68%), Gaps = 4/158 (2%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L F G L + TDE L++ EQ G + VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 199 EPEQL---FTGRLSFEMTDERLRSRSEQRGTLTGCVVMRDPNTKRSRGFGFVTYATVEEV 255
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGR VE KRAV R+ +P A T++K+FV G+K D EE LR+YF Q+
Sbjct: 256 DAAMNARPHKVDGRAVEPKRAVSREGSQRPGACLTMEKVFVAGIKEDTEEHHLRDYFEQY 315
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T+ +G K+GFAFI F D D +DKIV+ K
Sbjct: 316 GKIEVIKIMTDXGSGKKKGFAFISFGDDDSMDKIVIQK 353
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 50/84 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
++ KVF+ G+ T + L+ +FEQ+G+I + +M D + + +GF FI++ + +D
Sbjct: 290 TMEKVFVAGIKEDTEEHHLRDYFEQYGKIEVIKIMTDXGSGKKKGFAFISFGDDDSMDKI 349
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H +G E ++A+P+ E+
Sbjct: 350 VIQKYHRENGHNCEVRKALPKQEV 373
>gi|148237075|ref|NP_001082414.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus laevis]
gi|27735460|gb|AAH41277.1| LOC398455 protein, partial [Xenopus laevis]
gi|77748282|gb|AAI06306.1| LOC398455 protein [Xenopus laevis]
Length = 308
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGGL+ +TT+E L+ FE +G++ D VV+ +P TKRSR FGF+TYS A D A+
Sbjct: 11 LCKLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAV 70
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIE 134
PH +DG VE KRAV R++ +P A+A VKK+FVGGLK++ E DL E+FSQFG +E
Sbjct: 71 EASPHVVDGNNVELKRAVSREDSARPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGPVE 130
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
V ++ +K TG KRGF F+ FN +D DK + K + RVE
Sbjct: 131 KVEVIADKLTGKKRGFGFVYFNSHDSADKAAVVKFHSVNGHRVE 174
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + V V+ D +T + RGFGF+
Sbjct: 90 REDSARPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGPVEKVEVIADKLTGKKRGFGFV 149
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
++ D A + H+++G VE K+AVP++E+
Sbjct: 150 YFNSHDSADKAAVVKFHSVNGHRVEVKKAVPKEEL 184
>gi|49522060|gb|AAH71067.1| LOC398455 protein [Xenopus laevis]
Length = 303
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGGL+ +TT+E L+ FE +G++ D VV+ +P TKRSR FGF+TYS A D A+
Sbjct: 6 LCKLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAV 65
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIE 134
PH +DG VE KRAV R++ +P A+A VKK+FVGGLK++ E DL E+FSQFG +E
Sbjct: 66 EASPHVVDGNNVELKRAVSREDSARPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGPVE 125
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
V ++ +K TG KRGF F+ FN +D DK + K + RVE
Sbjct: 126 KVEVIADKLTGKKRGFGFVYFNSHDSADKAAVVKFHSVNGHRVE 169
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + V V+ D +T + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGPVEKVEVIADKLTGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
++ D A + H+++G VE K+AVP++E+
Sbjct: 145 YFNSHDSADKAAVVKFHSVNGHRVEVKKAVPKEEL 179
>gi|209733550|gb|ACI67644.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 181
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ T D+ L+ FEQ+G++ D VV+ + +RSR FGF+TYS A+ D AM
Sbjct: 7 LCKLFVGGLNVDTDDDGLRKHFEQYGQLTDCVVVVNKQLQRSRCFGFVTYSSAEEADAAM 66
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIE 134
+ RPH +DG VE KRAV R++ GKPEA A VKK+F+GGLKD ED+ L EYFSQFG IE
Sbjct: 67 AARPHVVDGTNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIE 126
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKI 169
++ KETG KRGF F+ F D D DK V+ K
Sbjct: 127 KAEVIAEKETGKKRGFGFVHFTDNDSADKAVVLKF 161
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE+L +K+FIGGL DE L +F Q+GEI V+ + T + RGFGF+ +++
Sbjct: 91 KPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIEKAEVIAEKETGKKRGFGFVHFTDN 150
Query: 69 KMVDDAMSNRPHNI 82
D A+ + HNI
Sbjct: 151 DSADKAVVLKFHNI 164
>gi|209737592|gb|ACI69665.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 167
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ T D+ L+ FEQ+G++ D VV+ + +RSR FGF+TYS A+ D AM
Sbjct: 7 LCKLFVGGLNVDTDDDGLRKHFEQYGQLTDCVVVVNKQLQRSRCFGFVTYSSAEEADAAM 66
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIE 134
+ RPH +DG VE KRAV R++ GKPEA A VKK+F+GGLKD ED+ L EYFSQFG IE
Sbjct: 67 AARPHVVDGTNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIE 126
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKI 169
++ KETG KRGF F+ F D D DK V+ K
Sbjct: 127 KAEVIAEKETGKKRGFGFVHFTDNDSADKAVVLKF 161
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE+L +K+FIGGL DE L +F Q+GEI V+ + T + RGFGF+ +++
Sbjct: 91 KPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIEKAEVIAEKETGKKRGFGFVHFTDN 150
Query: 69 KMVDDAMSNRPHNIDG 84
D A+ + HNI+G
Sbjct: 151 DSADKAVVLKFHNING 166
>gi|148233322|ref|NP_001080493.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus laevis]
gi|27924337|gb|AAH45023.1| Hnrpa0-prov protein [Xenopus laevis]
Length = 308
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGGL+ +TT+E L+ FE +G++ D VV+ +P TKRSR FGF+TYS A D A+
Sbjct: 11 LCKLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAV 70
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIE 134
PH +DG VE KRAV R++ KP A+A VKK+FVGGLK++ E DL E+FSQFG +E
Sbjct: 71 EAAPHVVDGNNVELKRAVSREDSAKPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGAVE 130
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
V ++ +K +G KRGF F+ F +D DK + K + RVE
Sbjct: 131 RVEIIADKLSGKKRGFGFVYFASHDSADKAAVVKFHSVNGHRVE 174
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K ++K+F+GGL + L F Q+G + V ++ D ++ + RGFGF+
Sbjct: 90 REDSAKPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGAVERVEIIADKLSGKKRGFGFV 149
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
++ D A + H+++G VE K+AVP++E+G
Sbjct: 150 YFASHDSADKAAVVKFHSVNGHRVEVKKAVPKEELG 185
>gi|443705196|gb|ELU01851.1| hypothetical protein CAPTEDRAFT_169740 [Capitella teleta]
Length = 186
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP+T+RSRGFGFITY A+ VD+A RPH ID R VE KRAVPR++ G+PEA+ ++K
Sbjct: 1 MRDPMTRRSRGFGFITYKTAESVDEAQKARPHTIDKRQVEPKRAVPREDSGRPEAHMSLK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D E LREYFS++G IES++++T+KET RGF FI F+DYD VDKIV+
Sbjct: 61 KIFVGGIKEDTTEAHLREYFSEYGPIESIDIITDKETKRSRGFGFITFDDYDPVDKIVMQ 120
Query: 168 KITLLLDRRVE 178
+ ++ + E
Sbjct: 121 RHHMINGHKSE 131
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D + SL+K+F+GG+ TT+ L+ +F ++G I + ++ D TKRSRGFGF
Sbjct: 46 PREDSGRPEAHMSLKKIFVGGIKEDTTEAHLREYFSEYGPIESIDIITDKETKRSRGFGF 105
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + VD + R H I+G E K+A+P++
Sbjct: 106 ITFDDYDPVDKIVMQRHHMINGHKSEVKKALPKN 139
>gi|444719973|gb|ELW60761.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 183
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+FIG L + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFCKLFIGDLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDG+VVE K AV R+E GKP + TVKK+F GG+K D EE R+YF ++
Sbjct: 64 DAAMAARPHSIDGKVVEPKHAVAREESGKPGTHVTVKKLFAGGIKEDTEEHHFRDYFEEY 123
Query: 131 GTIESVNMVTNK 142
G I+++ ++T++
Sbjct: 124 GKIDTIKIITDQ 135
>gi|45360449|ref|NP_988923.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus (Silurana)
tropicalis]
gi|38181654|gb|AAH59760.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus (Silurana)
tropicalis]
Length = 309
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGGL+ +TT+E L+ FE +G++ D VV+ +P TKRSR FGF+TYS A D A+
Sbjct: 11 LCKLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAV 70
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE 134
PH +DG VE KRAV R++ KP A+A VKK+FVGGLK D E DL E+F+QFG +E
Sbjct: 71 EASPHVVDGNNVELKRAVSREDSAKPGAHAKVKKLFVGGLKEDVGESDLLEHFAQFGAVE 130
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
V ++ +K +G KRGF F+ F ++D DK + K + RVE
Sbjct: 131 KVEIIADKVSGKKRGFGFVYFTNHDSADKAAVVKFHSINGHRVE 174
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K ++K+F+GGL + L F Q+G + V ++ D ++ + RGFGF+
Sbjct: 90 REDSAKPGAHAKVKKLFVGGLKEDVGESDLLEHFAQFGAVEKVEIIADKVSGKKRGFGFV 149
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
++ D A + H+I+G VE K+AVP++E+
Sbjct: 150 YFTNHDSADKAAVVKFHSINGHRVEVKKAVPKEEL 184
>gi|351702148|gb|EHB05067.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 181
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 110/158 (69%), Gaps = 4/158 (2%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 27 EPEQLSKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 86
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+ AM PH +DG VVE KR V R++ KP A+ TVKK+ V G+K D E +LR+ F ++
Sbjct: 87 ETAMCTLPHKVDGDVVEPKRTVSREDSVKPGAHLTVKKICVSGIKEDTEAYNLRDDFEKY 146
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++ ++++G K FA +D D +DKIV+ K
Sbjct: 147 GKIEIIEVMEDRQSGKKSEFA---SDDCDTLDKIVVQK 181
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ + K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ Y
Sbjct: 25 PKEPEQLSKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT---YS 81
Query: 160 VVDKIVLSKITL 171
V+++ + TL
Sbjct: 82 CVEEVETAMCTL 93
>gi|119614244|gb|EAW93838.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614246|gb|EAW93840.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614247|gb|EAW93841.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
Length = 301
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP +KRSRGFGF+T+S VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVK
Sbjct: 1 MRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D EE LR+YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL
Sbjct: 61 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 120
Query: 168 KITLLLDRRVE 178
K + E
Sbjct: 121 KYHTINGHNAE 131
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 58 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 117
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 118 VLQKYHTINGHNAEVRKALSRQEM 141
>gi|355750213|gb|EHH54551.1| hypothetical protein EGM_15416, partial [Macaca fascicularis]
Length = 182
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 108/168 (64%), Gaps = 6/168 (3%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVY-----AADKAAVVKFHPIQGHRVE 164
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YAA-----DKAAVVKFHPIQGHRVEVKKAVPKEDI 174
>gi|449474732|ref|XP_004175903.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A0 [Taeniopygia guttata]
Length = 310
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+L +FIGG++ ++T L+ F +G + D VV+ +P TKRSR FGF+TYS + D A
Sbjct: 5 ALCXIFIGGINVQSTKAGLREQFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEADAA 64
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTI 133
M+ PH +DG VE KRAV R++ KP A+A VKK+FVGGLK D E L ++FSQFG
Sbjct: 65 MAASPHAVDGNAVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGVLMQHFSQFGPX 124
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E ++++K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 125 EKAEIISDKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K ++K+F+GGL + L F Q+G ++ D + + RGFGF+
Sbjct: 85 REDSAKPGAHAKVKKLFVGGLKGDVGEGVLMQHFSQFGPXEKAEIISDKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>gi|392350253|ref|XP_003750604.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like [Rattus norvegicus]
Length = 302
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 5 YDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
Y EPE L K+ I ++ T+E+L+ FEQWG + D VVM+DP +KRSR +GF+T
Sbjct: 2 YKSESSKEPEQLWKLSIRERSFKATNENLRNHFEQWGTLTDCVVMRDPNSKRSRVWGFVT 61
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
Y+ K VD AMS + H +DGR VE KRAV R+ + + TVKK+FVGG+K D E L
Sbjct: 62 YATVKEVDAAMSAKTHKVDGRAVEPKRAVSREVSQRQGVHLTVKKIFVGGIKEDTAEYHL 121
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YF Q+G IE + ++T++ + KRGFAF+ + +D +DKIV+ K + E
Sbjct: 122 RDYFEQYGKIEVIEIMTDRGSEKKRGFAFVTSDGHDXMDKIVIRKYHTVNGHNCE 176
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D +++ RGF F+T +D
Sbjct: 103 TVKKIFVGGIKEDTAEYHLRDYFEQYGKIEVIEIMTDRGSEKKRGFAFVTSDGHDXMDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN---ATVKKMFVGG 114
+ + H ++G E ++AV + E ++ ++ F GG
Sbjct: 163 VIRKYHTVNGHNCEVRKAVLKQETATASSSQRGXSISGNFGGG 205
>gi|392342164|ref|XP_003754522.1| PREDICTED: LOW QUALITY PROTEIN: putative heterogeneous nuclear
ribonucleoprotein A1-like 3-like [Rattus norvegicus]
Length = 352
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 5 YDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
Y EPE L K+ I ++ T+E+L+ FEQWG + D VVM+DP +KRSR +GF+T
Sbjct: 2 YKSESSKEPEQLWKLSIRERSFKATNENLRNHFEQWGTLTDCVVMRDPNSKRSRVWGFVT 61
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
Y+ K VD AMS + H +DGR VE KRAV R+ + + TVKK+FVGG+K D E L
Sbjct: 62 YATVKEVDAAMSAKTHKVDGRAVEPKRAVSREVSQRQGVHLTVKKIFVGGIKEDTAEYHL 121
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YF Q+G IE + ++T++ + KRGFAF+ + +D +DKIV+ K + E
Sbjct: 122 RDYFEQYGKIEVIEIMTDRGSEKKRGFAFVTSDGHDXMDKIVIRKYHTVNGHNCE 176
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D +++ RGF F+T +D
Sbjct: 103 TVKKIFVGGIKEDTAEYHLRDYFEQYGKIEVIEIMTDRGSEKKRGFAFVTSDGHDXMDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN---ATVKKMFVGGL 115
+ + H ++G E ++AV + E ++ ++ F GG
Sbjct: 163 VIRKYHTVNGHNCEVRKAVLKQETATASSSQRGXSISGNFGGGC 206
>gi|395546377|ref|XP_003775064.1| PREDICTED: uncharacterized protein LOC100925827 [Sarcophilus
harrisii]
Length = 471
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ +T + L+ FE +G + D VVM +P T RSR FGFI++S K D+A+
Sbjct: 17 LCKLFVGGLNPQTDEFGLRKHFEAFGSLTDCVVMMNPQTNRSRCFGFISFSTMKEADEAV 76
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE 134
+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQFG +E
Sbjct: 77 AAAPHIVDGNHVELKRAVAREDSCRPGAHARVKKIFVGGLKSDMVESDLVEHFSQFGPVE 136
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K++G KRGF F+ F D+D DK + K + R+E
Sbjct: 137 RAKIILHKQSGKKRGFGFVYFFDHDTADKAAVVKFHPIQGHRIE 180
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 104 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
NA + K+FVGGL Q +E LR++F FG++ ++ N +T R F FI F+ D
Sbjct: 14 NAQLCKLFVGGLNPQTDEFGLRKHFEAFGSLTDCVVMMNPQTNRSRCFGFISFSTMKEAD 73
Query: 163 KIVLSKITLLLDRRVE 178
+ V + ++ VE
Sbjct: 74 EAVAAAPHIVDGNHVE 89
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GGL + L F Q+G + ++ + + RGFGF+ + + D A
Sbjct: 108 VKKIFVGGLKSDMVESDLVEHFSQFGPVERAKIILHKQSGKKRGFGFVYFFDHDTADKAA 167
Query: 76 SNRPHNIDGRVVETKRAVPRDE 97
+ H I G +E ++A+P+++
Sbjct: 168 VVKFHPIQGHRIEVRKALPKED 189
>gi|334350508|ref|XP_003342364.1| PREDICTED: hypothetical protein LOC100617798 [Monodelphis
domestica]
Length = 675
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/176 (45%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R S + L K+F+GGL TT+ L+++FE +G + D VV+ + T RSR FGFI
Sbjct: 142 RSPSSSVLKSAQLCKLFVGGLSPYTTEIRLRSYFEAFGCLRDCVVVMNAQTNRSRCFGFI 201
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
T+S D AM+ PH +DG VE KRAV R++ KP A+A VKK+FVGG+K D E D
Sbjct: 202 TFSSLSEADAAMAASPHEVDGSRVELKRAVSREDSCKPGAHARVKKIFVGGIKGDVSESD 261
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
L +FSQFG +E ++ NK++G KRGF F+ F D+D DK + K + RVE
Sbjct: 262 LVRHFSQFGPVEKAEIIVNKQSGKKRGFGFVHFFDHDTADKAAVIKFHPIQGHRVE 317
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K ++K+F+GG+ ++ L F Q+G + ++ + + + RGFGF+
Sbjct: 233 REDSCKPGAHARVKKIFVGGIKGDVSESDLVRHFSQFGPVEKAEIIVNKQSGKKRGFGFV 292
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + D A + H I G VE K+A+P++++
Sbjct: 293 HFFDHDTADKAAVIKFHPIQGHRVEVKKALPKEDL 327
>gi|444728164|gb|ELW68628.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 201
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FIGG + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLWKLFIGGSSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ T+KK+F+ G+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTMKKIFISGIKEDAEEHHLRDYFEQY 128
Query: 131 G 131
Sbjct: 129 A 129
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ + K+F+GG + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLWKLFIGGSSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|195500854|ref|XP_002097552.1| GE24427 [Drosophila yakuba]
gi|194183653|gb|EDW97264.1| GE24427 [Drosophila yakuba]
Length = 430
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 14/179 (7%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +TT ++L+ FF Q+G + D VVM+DP+ SRGFGF+TY + K ++
Sbjct: 29 EHLRKIFIGGLSTQTTMDTLREFFSQFGSVADAVVMRDPVNNHSRGFGFVTYVDPKSIEI 88
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE----------IGKPEANATV---KKMFVGGLKD-QE 119
RPH ID + VETK A+PR E +G A A K+F+GGLKD +
Sbjct: 89 VQKARPHTIDNKAVETKPALPRHEFNRAGGVGSILGGCSAGAGFVKSNKIFLGGLKDFHD 148
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E +REYFSQFG + +V ++ +K+TG KRGF F+EF D +K + +L VE
Sbjct: 149 EKTVREYFSQFGAVATVKLLMDKDTGRKRGFGFLEFEDPSSAEKALAQGKHSILQTLVE 207
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 49/83 (59%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL +++++ +F Q+G + V ++ D T R RGFGF+ + + + A++
Sbjct: 137 KIFLGGLKDFHDEKTVREYFSQFGAVATVKLLMDKDTGRKRGFGFLEFEDPSSAEKALAQ 196
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
H+I +VE KR+ + + GK
Sbjct: 197 GKHSILQTLVEVKRSTQKPDPGK 219
>gi|410914421|ref|XP_003970686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Takifugu rubripes]
Length = 300
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+L K+F+GGL+ +T DE L+ +FE++G++ D VV+ + RSR FGFITYS + D A
Sbjct: 4 ALTKLFVGGLNVQTNDEGLRQYFEKYGQLSDCVVVMNNQLGRSRCFGFITYSTPEEADTA 63
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTI 133
M+ PH +DG VE KRAV R + PE A VKK+FVGG++D E L +YFSQFG +
Sbjct: 64 MAASPHVVDGHNVELKRAVARQDADNPEVLANVKKIFVGGVQDHIEAQHLTDYFSQFGAV 123
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E ++++K TG KRGF F+ F D D K VL++ + +VE
Sbjct: 124 EKAEIISDKLTGKKRGFGFVFFVDTDSATKAVLTRYHTISGNKVE 168
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE L +K+F+GG+ + L +F Q+G + ++ D +T + RGFGF+ + +
Sbjct: 90 PEVLANVKKIFVGGVQDHIEAQHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFVDTD 149
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
A+ R H I G VE K+A+ + E+
Sbjct: 150 SATKAVLTRYHTISGNKVEAKKAMTKQEM 178
>gi|449266123|gb|EMC77233.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Columba livia]
Length = 132
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 96/122 (78%), Gaps = 1/122 (0%)
Query: 48 VMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATV 107
VM+DP TKRSRGFGF+TYS + VD AM+ RPH +DGRVVE KRAV R++ +P A+ TV
Sbjct: 1 VMRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 60
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
KK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+
Sbjct: 61 KKIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI 120
Query: 167 SK 168
K
Sbjct: 121 QK 122
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +F Q+G+I + +M D + + RGF F+
Sbjct: 48 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFV 107
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVE 88
T+ + VD + + H ++G E
Sbjct: 108 TFDDHDSVDKIVIQKYHTVNGHNCE 132
>gi|194901404|ref|XP_001980242.1| GG17034 [Drosophila erecta]
gi|190651945|gb|EDV49200.1| GG17034 [Drosophila erecta]
Length = 427
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 108/179 (60%), Gaps = 14/179 (7%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+F+GGL +TT ++L+ FF Q+G + D VVM+DPIT SRGFGF+TY + K ++
Sbjct: 29 EHLRKIFVGGLSTQTTMDTLREFFSQFGSVADAVVMRDPITNHSRGFGFVTYVDPKSIEI 88
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATV-------------KKMFVGGLKD-QE 119
RPH ID + VETK A+PR E + ++ K+F+GGLKD +
Sbjct: 89 VQRARPHTIDNKAVETKPALPRHEFNRGGGVGSILGGCGVGAGFVKSNKIFIGGLKDFHD 148
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E +REYFSQFG + ++ + +K+TG KRGF F+EF D +K + +L VE
Sbjct: 149 EKTVREYFSQFGAVATMELFMDKDTGRKRGFGFLEFQDPSSTEKALAQGKHSILQTLVE 207
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL +++++ +F Q+G + + + D T R RGFGF+ + + + A++
Sbjct: 137 KIFIGGLKDFHDEKTVREYFSQFGAVATMELFMDKDTGRKRGFGFLEFQDPSSTEKALAQ 196
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
H+I +VE KR+ + GK
Sbjct: 197 GKHSILQTLVEVKRSTQKPHPGK 219
>gi|115532848|ref|NP_001040944.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
gi|351063092|emb|CCD71136.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
Length = 308
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
Query: 33 LQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRA 92
++ F+ Q+GEI D++VM+DP TKRSRGFGF+T+S VD AM RPH IDG+ V+ KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 93 VPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
VPRD+ + E+N + K+++V G++ D ED L EYF+++GT+ ++ +K T RGF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 152 FIEFNDYDVVDKIVLSKITLLLDRRVE 178
F+ F+D+D VD+ VL K ++ R +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 57/102 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S +++++ G+ T++ L +F ++G + ++ D T++ RGFGF
Sbjct: 62 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 121
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+T+ + VD + + H ++G + ++ + +DE+ K + N
Sbjct: 122 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMN 163
>gi|71988518|ref|NP_001023199.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
gi|351063091|emb|CCD71135.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
Length = 309
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
Query: 33 LQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRA 92
++ F+ Q+GEI D++VM+DP TKRSRGFGF+T+S VD AM RPH IDG+ V+ KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 93 VPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
VPRD+ + E+N + K+++V G++ D ED L EYF+++GT+ ++ +K T RGF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 152 FIEFNDYDVVDKIVLSKITLLLDRRVE 178
F+ F+D+D VD+ VL K ++ R +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 57/102 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S +++++ G+ T++ L +F ++G + ++ D T++ RGFGF
Sbjct: 62 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 121
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+T+ + VD + + H ++G + ++ + +DE+ K + N
Sbjct: 122 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMN 163
>gi|198428311|ref|XP_002127222.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 359
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 115/171 (67%), Gaps = 6/171 (3%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+F+GG+++ TTD+ + A+F ++G + D VV++D RS+GFGF+T+ +
Sbjct: 8 EEEQSRKLFVGGINHDTTDDGMSAYFSKYGNVTDCVVIRD--NGRSKGFGFVTFETEEEA 65
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
D M +RPH +D R ++ KRAV R+E KP A+ VKK+F+GG+K+ +E+ LREYF+ F
Sbjct: 66 DACMDDRPHTLDSRTIDVKRAVSREESSKPGAHVQVKKIFIGGVKEGCDENALREYFNTF 125
Query: 131 ---GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
IESV + ++ET +GFAF+ F+D+DVVDK+V +I + R E
Sbjct: 126 TGNARIESVEIPLDRETTRPKGFAFVTFDDFDVVDKLVAKRIHEIGGFRCE 176
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQW---GEIVDVVVMKDPITKRSRGF 60
R + SK ++K+FIGG+ + +L+ +F + I V + D T R +GF
Sbjct: 89 REESSKPGAHVQVKKIFIGGVKEGCDENALREYFNTFTGNARIESVEIPLDRETTRPKGF 148
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
F+T+ + +VD ++ R H I G E K+A+ + E+
Sbjct: 149 AFVTFDDFDVVDKLVAKRIHEIGGFRCEVKKALSKQEM 186
>gi|149615308|ref|XP_001519571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like, partial
[Ornithorhynchus anatinus]
Length = 270
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 100/160 (62%), Gaps = 2/160 (1%)
Query: 21 IGGLD-YRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRP 79
IG L R + FE +G + D VV+ +P TKRSR FGF+TYS + D AM+ P
Sbjct: 1 IGALSTCRRASRGPRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAASP 60
Query: 80 HNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNM 138
H +DG VE KRAV R++ +P A+A VKK+FVGGLK D EDDL E+FSQFG +E +
Sbjct: 61 HAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEDDLVEHFSQFGPVEKAEI 120
Query: 139 VTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+ +K++G KRGF F+ F +D DK + K + RVE
Sbjct: 121 IADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIHGHRVE 160
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL ++ L F Q+G + ++ D + + RGFGF+
Sbjct: 76 REDSARPGAHAKVKKLFVGGLKGDVAEDDLVEHFSQFGPVEKAEIIADKQSGKKRGFGFV 135
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 136 YFQSHDAADKAAVVKFHPIHGHRVEVKKAVPKEDI 170
>gi|340378651|ref|XP_003387841.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Amphimedon queenslandica]
Length = 409
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL RTT E L+ ++ +WGE++D VVMKDP T R RGFGFITY+ + V+ ++
Sbjct: 1 MFIGGLTLRTTKEMLEDYYCRWGEVIDSVVMKDPQTNRPRGFGFITYTSPESVERCLAEG 60
Query: 79 PHNIDGRVVETKRAVPRDEIGK-PEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
PH ID R+VETKRAVPR+E + PE ++ KKMF+GGL +D L Y+ Q+G I
Sbjct: 61 PHEIDERIVETKRAVPREETRQEPEPSSKSKKMFIGGLTTSATKDKLERYYGQWGMIIDA 120
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+VT+ +T RGF F+ +N + V+K + + + +R VE
Sbjct: 121 AVVTDPQTRRSRGFGFVTYNSRESVEKCLAAGPHYIDERLVE 162
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 3 PRYDDSKCTEPES-LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR + + EP S +K+FIGGL T + L+ ++ QWG I+D V+ DP T+RSRGFG
Sbjct: 76 PREETRQEPEPSSKSKKMFIGGLTTSATKDKLERYYGQWGMIIDAAVVTDPQTRRSRGFG 135
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK-PEANATVKKMFVGGLK-DQE 119
F+TY+ + V+ ++ PH ID R+VETK+AVPR+E K + ++ KK+F+GGL D
Sbjct: 136 FVTYNSRESVEKCLAAGPHYIDERLVETKKAVPREETPKETDPSSKSKKVFLGGLHLDTT 195
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+++L E G IE V+++ + E RGF FI F DY+ +++ I + DR VE
Sbjct: 196 KEELMEAAKHIGEIEEVSLIIDPERNKPRGFGFITFTDYESAERLCNQGILRIRDRDVE 254
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 3 PRYDDSKCTEPES-LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR + K T+P S +KVF+GGL TT E L + GEI +V ++ DP + RGFG
Sbjct: 168 PREETPKETDPSSKSKKVFLGGLHLDTTKEELMEAAKHIGEIEEVSLIIDPERNKPRGFG 227
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAV 93
FIT+++ + + + I R VETK+AV
Sbjct: 228 FITFTDYESAERLCNQGILRIRDRDVETKKAV 259
>gi|313230121|emb|CBY07825.1| unnamed protein product [Oikopleura dioica]
Length = 422
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 105/166 (63%), Gaps = 6/166 (3%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
D + EPE RK+FIG L Y +E L+ F ++GEIVD VV KDP TK ++GFGF+T++
Sbjct: 9 DDEFNEPEQARKIFIGNLPYEADEEMLKNHFSRFGEIVDCVVPKDPKTKFAKGFGFVTFT 68
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREY 126
VD+ M+NRPH + GRV+E KRA+ R+E P A + K+++G + D E +++EY
Sbjct: 69 RGTAVDEVMTNRPHKVAGRVLEPKRAISRNESRDPAAAVSTTKLYIGSIGDLTETEIKEY 128
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
FS FG I T E A +G AF+ F D+D VD+IV K T+
Sbjct: 129 FSSFGAI------TEFELHADKGQAFVTFQDHDPVDRIVGDKHTVA 168
>gi|17136826|ref|NP_476935.1| RNA-binding protein 4 [Drosophila melanogaster]
gi|7299787|gb|AAF54966.1| RNA-binding protein 4 [Drosophila melanogaster]
Length = 428
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 14/179 (7%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +TT E+L+ FF Q+G + D VV++DP++ SRGFGF+TY + K V+
Sbjct: 29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEI 88
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATV-------------KKMFVGGLKD-QE 119
RPH ID ++VETK A+PR + + +V K++F+GGLK+ +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHD 148
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E+ +REYFSQFG + SV ++ ++ETG +R F F+EF D +K + + +L VE
Sbjct: 149 ENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVE 207
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+++F+GGL + ++ +F Q+G + V ++ D T R R FGF+ + + + A++
Sbjct: 136 KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALA 195
Query: 77 NRPHNIDGRVVETKRAV 93
R H I +VE KR+
Sbjct: 196 PRKHWILQTLVEVKRST 212
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 100 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
K E ++K+F+GGL Q + LR +FSQFG + ++ + + RGF F+ + D
Sbjct: 24 KEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDP 83
Query: 159 DVVDKIVLSKITLLLDRRVE 178
V+ + ++ + ++ VE
Sbjct: 84 KSVEIVQRARPHTIDNKIVE 103
>gi|604437|gb|AAC47508.1| testis-specific-RRM-protein [Drosophila melanogaster]
Length = 428
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 14/179 (7%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +TT E+L+ FF Q+G + D VV++DP++ SRGFGF+TY + K V+
Sbjct: 29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEI 88
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATV-------------KKMFVGGLKD-QE 119
RPH ID ++VETK A+PR + + +V K++F+GGLK+ +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHD 148
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E+ +REYFSQFG + SV ++ ++ETG +R F F+EF D +K + + +L VE
Sbjct: 149 ENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVE 207
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+++F+GGL + ++ +F Q+G + V ++ D T R R FGF+ + + + A++
Sbjct: 136 KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALA 195
Query: 77 NRPHNIDGRVVETKRAV 93
R H I +VE KR+
Sbjct: 196 PRKHWILQTLVEVKRST 212
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 100 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
K E ++K+F+GGL Q + LR +FSQFG + ++ + + RGF F+ + D
Sbjct: 24 KEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDP 83
Query: 159 DVVDKIVLSKITLLLDRRVE 178
V+ + ++ + ++ VE
Sbjct: 84 KSVEIVQRARPHTIDNKIVE 103
>gi|146197870|dbj|BAF57645.1| hnRNP A2/B1 protein [Dugesia japonica]
Length = 386
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+K+F+GGL +TT+ ++ +F ++G++ DVV M+D +SRGFGF+ + EA+ VD
Sbjct: 17 FKKIFVGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNKSRGFGFVVFKEAESVDRCQ 76
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIE 134
+ RPH + G++V+TKRA+P++E P+ + K++F+GG++ EDDL++YFS FG I
Sbjct: 77 AERPHQLLGKIVDTKRAMPKEESLNPDIHCNSKRIFIGGIRRFFTEDDLKDYFSTFGEIV 136
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +G RGFAFI F D D+VDK++LSK
Sbjct: 137 DCTIKRDNVSGLSRGFAFITFTDRDIVDKVILSK 170
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 59/91 (64%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+++FIGG+ T++ L+ +F +GEIVD + +D ++ SRGF FIT+++ +VD +
Sbjct: 109 KRIFIGGIRRFFTEDDLKDYFSTFGEIVDCTIKRDNVSGLSRGFAFITFTDRDIVDKVIL 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATV 107
++PH I +V+ K+A+ +E+ + + N +
Sbjct: 169 SKPHAIRHCIVDVKKALSPEELRQLDENHST 199
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
KK+FVGGL Q E D+R+YFS++G + V + +K RGF F+ F + + VD+
Sbjct: 18 KKIFVGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNKSRGFGFVVFKEAESVDRCQA 77
Query: 167 SKITLLLDRRVE 178
+ LL + V+
Sbjct: 78 ERPHQLLGKIVD 89
>gi|19528161|gb|AAL90195.1| AT27014p [Drosophila melanogaster]
Length = 428
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 14/179 (7%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +TT E+L+ FF Q+G + D VV++DP++ SRGFGF+TY + K V+
Sbjct: 29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEI 88
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATV-------------KKMFVGGLKD-QE 119
RPH ID ++VETK A+PR + + +V K++F+GGLK+ +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHD 148
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E+ +REYFSQFG + SV ++ ++ETG +R F F+EF D +K + + +L VE
Sbjct: 149 ENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVE 207
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+++F+GGL + ++ +F Q+G + V ++ D T R R FGF+ + + + A++
Sbjct: 136 KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALA 195
Query: 77 NRPHNIDGRVVETKRAV 93
R H I +VE KR+
Sbjct: 196 PRKHWILQTLVEVKRST 212
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 100 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
K E ++K+F+GGL Q + LR +FSQFG + ++ + + RGF F+ + D
Sbjct: 24 KEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDP 83
Query: 159 DVVDKIVLSKITLLLDRRVE 178
V+ + ++ + ++ VE
Sbjct: 84 KSVEIVQRARPHTIDNKIVE 103
>gi|443724647|gb|ELU12551.1| hypothetical protein CAPTEDRAFT_175465 [Capitella teleta]
Length = 314
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+RK+FIGGL+ TTDESL+ +F +G I D VV+KD T RSR FGF+ YS + +VD A
Sbjct: 1 MRKLFIGGLNISTTDESLREYFSAFGTIEDCVVLKDS-TGRSRCFGFVVYSSSAIVDIAQ 59
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIE 134
++RPH +DG+ V+TKRA P+ E + TVKK+FVGGL ++ ++ ++ +F QFG +
Sbjct: 60 ASRPHVLDGKTVDTKRATPKGET----TSQTVKKIFVGGLSRNTTKESIQAFFEQFGGVS 115
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
V+ ++++G RGFA++ FND D VDK+ L ++ RR E
Sbjct: 116 DVDCPLDQKSGLGRGFAYVTFNDSDPVDKVSLIHYHMIDGRRCE 159
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
T ++++K+F+GGL TT ES+QAFFEQ+G + DV D + RGF ++T++++
Sbjct: 82 TTSQTVKKIFVGGLSRNTTKESIQAFFEQFGGVSDVDCPLDQKSGLGRGFAYVTFNDSDP 141
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
VD H IDGR E K+A+ + E+ +
Sbjct: 142 VDKVSLIHYHMIDGRRCEAKKALSKQEMSQ 171
>gi|344246565|gb|EGW02669.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 261
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 98/131 (74%), Gaps = 1/131 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSRGFGF+TYS + VD AM RPH +DGRVVE KRAV R++ KP A+ TVK
Sbjct: 1 MRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D EE +LR+YF ++G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 120
Query: 168 KITLLLDRRVE 178
K + E
Sbjct: 121 KYHTINGHNCE 131
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 47 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 106
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 107 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 141
>gi|55250278|gb|AAH85474.1| Hnrpa3 protein [Mus musculus]
Length = 313
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 98/131 (74%), Gaps = 1/131 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSRGFGF+TYS + VD AM RPH +DGRVVE KRAV R++ KP A+ TVK
Sbjct: 1 MRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D EE +LR+YF ++G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 120
Query: 168 KITLLLDRRVE 178
K + E
Sbjct: 121 KYHTINGHNCE 131
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 58 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 117
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 118 VVQKYHTINGHNCEVKKALSKQEM 141
>gi|296211878|ref|XP_002752596.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Callithrix
jacchus]
Length = 327
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSRGFGF+TY+ + VD AM+ RPH +DGRVVE KRAV R++ +P A+ TVK
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 120
Query: 168 KITLLLDRRVE 178
K + E
Sbjct: 121 KYHTVNGHNCE 131
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 47 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 106
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 107 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 141
>gi|119617173|gb|EAW96767.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_g [Homo
sapiens]
Length = 319
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSRGFGF+TY+ + VD AM+ RPH +DGRVVE KRAV R++ +P A+ TVK
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 120
Query: 168 KITLLLDRRVE 178
K + E
Sbjct: 121 KYHTVNGHNCE 131
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+
Sbjct: 47 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFV 106
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 107 TFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEM 141
>gi|432877061|ref|XP_004073087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL T D+ L+ FEQ+G ++D V+ +RSR FGF+TY + D AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEADAAMAA 66
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
PH ++G VE KRAVP+ + + EA A VKK+FVGGLK D +EDDL +YFSQ+G +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENS 126
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+++ K+TG KRGF F+ F D+ D V + RVE
Sbjct: 127 EIMSEKDTGKKRGFGFVHFTDHYAADMAVAVPFHTVNGHRVE 168
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 53/86 (61%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GGL ++ L +F Q+GE+ + +M + T + RGFGF+ +++ D A+
Sbjct: 96 VKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKDTGKKRGFGFVHFTDHYAADMAV 155
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKP 101
+ H ++G VE K++VP+ E+ P
Sbjct: 156 AVPFHTVNGHRVEVKKSVPKQEMQAP 181
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 111/172 (64%), Gaps = 6/172 (3%)
Query: 10 CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
C +P K+FIGGL ++TT E L+ +F ++GEI + +VM+DPITKRSRGFGF+T+S+
Sbjct: 20 CQDP---GKMFIGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPA 76
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPR--DEIGKPEANATVKKMFVGGLKDQEE-DDLREY 126
VD ++N PH +D +V++ K A PR + +P+ KK+FVGGL DD+++Y
Sbjct: 77 SVDKVLANGPHELDSKVIDPKVAFPRRPNTANQPKLVTKTKKIFVGGLSASTTVDDVKQY 136
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
F QFG IE ++ +K T RGFAF+ F + DVVDK+ + ++ VE
Sbjct: 137 FEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDKVCEIHFHEINNKMVE 188
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT + ++ +FEQ+G+I D ++M D T+R RGF F+T+ +VD
Sbjct: 117 KKIFVGGLSASTTVDDVKQYFEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDKVCE 176
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEAN 104
H I+ ++VE K+A P+ E+ P+ +
Sbjct: 177 IHFHEINNKMVECKKAQPK-EVMMPQGS 203
>gi|432091440|gb|ELK24522.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 117
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 86/106 (81%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L+K+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLQKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD 117
D AM +RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K+
Sbjct: 69 DAAMKSRPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKE 114
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLQKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + S+ + R VE
Sbjct: 67 EVDAAMKSRPHKVDGRVVE 85
>gi|194389862|dbj|BAG60447.1| unnamed protein product [Homo sapiens]
Length = 208
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 93/130 (71%), Gaps = 7/130 (5%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQ-- 129
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG +D Y +Q
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGG----SYNDFGNYNNQSS 124
Query: 130 -FGTIESVNM 138
FG ++ N
Sbjct: 125 NFGPMKGGNF 134
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|432961306|ref|XP_004086601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL T D+ L+ FEQ+G ++D V+ +RSR FGF+TY + + AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEANAAMAA 66
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
PH ++G VE KRAVP+ + + EA VKK+FVGGLK D +EDDL +YFSQFG +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQTDESEARDKVKKIFVGGLKNDIQEDDLTDYFSQFGEVENS 126
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+++ KETG KRGF F+ F D+ D V + RVE
Sbjct: 127 EIMSEKETGKKRGFGFVHFTDHYAADMAVAVPFHTVNGHRVE 168
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 53/86 (61%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GGL ++ L +F Q+GE+ + +M + T + RGFGF+ +++ D A+
Sbjct: 96 VKKIFVGGLKNDIQEDDLTDYFSQFGEVENSEIMSEKETGKKRGFGFVHFTDHYAADMAV 155
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKP 101
+ H ++G VE K+AVP+ E+ P
Sbjct: 156 AVPFHTVNGHRVEVKKAVPKQEMQAP 181
>gi|432877083|ref|XP_004073098.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Oryzias
latipes]
Length = 347
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL T D+ L+ FEQ+G ++D V+ +RSR FGF+TY + + AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEANAAMAA 66
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
PH ++G VE KRAVP+ + + EA A VKK+FVGGLK D +EDDL +YFSQ+G +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENS 126
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+++ K TG KRGF F+ F D D V ++ RVE
Sbjct: 127 EIISEKTTGKKRGFGFVHFTDDYAADMAVAVPFHIVNGHRVE 168
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL T D+ L+ FEQ+G ++D V+ +RSR FGF+TY + + AM+
Sbjct: 197 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEANAAMAA 256
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
PH ++G VE KRAVP+ + + EA A VKK+FVGGLK D +EDDL +YFSQ
Sbjct: 257 SPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQ 309
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GGL ++ L +F Q+GE+ + ++ + T + RGFGF+ +++ D A+
Sbjct: 96 VKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIISEKTTGKKRGFGFVHFTDDYAADMAV 155
Query: 76 SNRPHNIDGRVVETKRAVPRDEIG-KPEANATVKKM-------FVGGLK-DQEEDDLREY 126
+ H ++G VE K+AVP+ E+ KP + + KM FVGGLK D +D LR++
Sbjct: 156 AVPFHIVNGHRVEVKKAVPKQEMQIKPNTSYDLPKMFNQACKLFVGGLKVDTNDDGLRKH 215
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEF 155
F QFGT+ +V +K R F F+ +
Sbjct: 216 FEQFGTLIDCAVVPHKTAQRSRCFGFVTY 244
>gi|432096566|gb|ELK27213.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 117
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 85/106 (80%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLWKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD 117
D AM +RPH +DGRVV+ KRAV R++ +P A+ TVKK+FVGG+K+
Sbjct: 69 DAAMKSRPHKVDGRVVQPKRAVSREDSQRPGAHLTVKKIFVGGIKE 114
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ + K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLWKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSK 168
VD + S+
Sbjct: 67 EVDAAMKSR 75
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 64/162 (39%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E VD +
Sbjct: 227 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 286
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D D+++ YFSQFG +E
Sbjct: 287 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGAVEET 343
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 344 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 385
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ + ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 314 KKIFVGGVSQDTSADEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 373
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 374 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 414
>gi|432877067|ref|XP_004073090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 282
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL T D+ L+ FEQ+G ++D V+ +RSR FGF+TY + D AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEADAAMAA 66
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
PH ++G VE KRAVP+ + + EA A VKK+FVGGLK D +EDDL +YFSQ+G +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENS 126
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+++ K TG KRGF F+ F D D V + RVE
Sbjct: 127 EIMSEKTTGKKRGFGFVHFTDDYAADMAVAVPFHTVNGHRVE 168
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 53/86 (61%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GGL ++ L +F Q+GE+ + +M + T + RGFGF+ +++ D A+
Sbjct: 96 VKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKTTGKKRGFGFVHFTDDYAADMAV 155
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKP 101
+ H ++G VE K++VP+ E+ P
Sbjct: 156 AVPFHTVNGHRVEVKKSVPKQEMQAP 181
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 64/162 (39%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E VD +
Sbjct: 200 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D D+++ YFSQFG +E
Sbjct: 260 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGPVEET 316
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 317 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 358
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ + ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 287 KKIFVGGVSQDTSADEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 346
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 347 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 387
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 111/162 (68%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F Q+G I+DV V+KDP+T+RSRGFGFIT++EA VD ++
Sbjct: 24 KLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDRVLAV 83
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P+++ GK ++ KK+FVGG+ +D D+++ YF+QFG +E
Sbjct: 84 PAHTLDGKKIDPKHATPKNK-GKATPSSKTKKVFVGGVSQDTSADEVKAYFNQFGRVEEA 142
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F DVVD+I + +++VE
Sbjct: 143 VMLMDQQTKRHRGFGFVTFESEDVVDRICEIHYHTIKNKKVE 184
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+ K T +KVF+GG+ T+ + ++A+F Q+G + + V++ D TKR RGFGF+T+
Sbjct: 102 NKGKATPSSKTKKVFVGGVSQDTSADEVKAYFNQFGRVEEAVMLMDQQTKRHRGFGFVTF 161
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+VD H I + VE K+A P++ I
Sbjct: 162 ESEDVVDRICEIHYHTIKNKKVECKKAQPKEAI 194
>gi|195571109|ref|XP_002103546.1| GD20485 [Drosophila simulans]
gi|194199473|gb|EDX13049.1| GD20485 [Drosophila simulans]
Length = 395
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +T+ + L+ FF Q+G + D VVM+DP++ SRGFGF+T+ + K V+
Sbjct: 29 EHLRKIFIGGLSTQTSVDKLREFFSQFGVVSDAVVMRDPMSNHSRGFGFVTFVDPKSVEI 88
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANA---------TVKKMFVGGLKD-QEEDDL 123
RPH ID ++VETK A+PR E + K++F+GGLK+ +E +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQEFKRGSVVGGFRFETGFVNSKRIFLGGLKEYHDEKVV 148
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYFSQFG + SV ++ ++ETG +R F F+EF D DK + + +L VE
Sbjct: 149 REYFSQFGPVASVKLLIDRETGRQRAFGFLEFVDPLSADKALAPRKHWILQTLVE 203
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+++F+GGL ++ ++ +F Q+G + V ++ D T R R FGF+ + + D A++
Sbjct: 132 KRIFLGGLKEYHDEKVVREYFSQFGPVASVKLLIDRETGRQRAFGFLEFVDPLSADKALA 191
Query: 77 NRPHNIDGRVVETKRAV 93
R H I +VE KR+
Sbjct: 192 PRKHWILQTLVEVKRST 208
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 100 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
K E + ++K+F+GGL Q D LRE+FSQFG + ++ + + RGF F+ F D
Sbjct: 24 KDEGHEHLRKIFIGGLSTQTSVDKLREFFSQFGVVSDAVVMRDPMSNHSRGFGFVTFVDP 83
Query: 159 DVVDKIVLSKITLLLDRRVE 178
V+ + ++ + ++ VE
Sbjct: 84 KSVEIVQRARPHTIDNKIVE 103
>gi|403283529|ref|XP_003933171.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Saimiri boliviensis boliviensis]
Length = 254
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSRGFGFI Y+ A+ VD AM+ RPH + GRVVE KRAV R++ +P A+ TVK
Sbjct: 1 MRDPNTKRSRGFGFIRYATAEEVDAAMNARPHKVHGRVVEPKRAVSREDSQRPGAHLTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+F+GG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VD IV+
Sbjct: 61 KIFLGGIKEDTEEHHLRDYFEQYGKIEVIEIITDRGSGKKRGFAFVAFDDHDSVDMIVIQ 120
Query: 168 KITLLLDRRVE 178
K + E
Sbjct: 121 KYHTVNGHNCE 131
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + L+ +FEQ+G+I + ++ D + + RGF F+
Sbjct: 47 REDSQRPGAHLTVKKIFLGGIKEDTEEHHLRDYFEQYGKIEVIEIITDRGSGKKRGFAFV 106
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + VD + + H ++G E ++A+ + E+
Sbjct: 107 AFDDHDSVDMIVIQKYHTVNGHNCEVRKALSKQEM 141
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 108/164 (65%), Gaps = 3/164 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++TT E L+ +F ++GEI + +VM+DPITKRSRGFGF+TY++ VD ++N
Sbjct: 24 KMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSVDKVLAN 83
Query: 78 RPHNIDGRVVETKRAVPR--DEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIE 134
PH +D ++++ K A PR + +P+ KK+FVGGL +D+++YFSQFG IE
Sbjct: 84 GPHELDTKLIDPKLAFPRRPNATQQPKMVTRTKKIFVGGLSASTTLEDVKQYFSQFGKIE 143
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGFAF+ F DVVDK+ + ++ VE
Sbjct: 144 DAMLMFDKATQRHRGFAFVTFECEDVVDKVCEIHFHEINNKMVE 187
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F Q+G+I D ++M D T+R RGF F+T+ +VD
Sbjct: 116 KKIFVGGLSASTTLEDVKQYFSQFGKIEDAMLMFDKATQRHRGFAFVTFECEDVVDKVCE 175
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANAT 106
H I+ ++VE K++ + G +AN +
Sbjct: 176 IHFHEINNKMVECKKSPAK---GGHDANCS 202
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 GKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 157
G E + KMFVGGL Q + LREYF+++G I+ ++ + T RGF F+ + D
Sbjct: 14 GNDEGHQDPGKMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYAD 73
Query: 158 YDVVDKIV 165
VDK++
Sbjct: 74 PGSVDKVL 81
>gi|195329212|ref|XP_002031305.1| GM25919 [Drosophila sechellia]
gi|194120248|gb|EDW42291.1| GM25919 [Drosophila sechellia]
Length = 421
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 14/179 (7%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +T+ E+L+ FF Q+G + D VVM+DP++ SRGFGF+T+ + K V+
Sbjct: 29 EHLRKIFIGGLSTQTSMETLREFFSQFGVVSDAVVMRDPVSNHSRGFGFVTFVDPKSVEI 88
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGK------------PEAN-ATVKKMFVGGLKD-QE 119
RPH ID ++VETK A+PR + + EA K++F+GGLK+ +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGFEAGFVNSKRIFLGGLKEYHD 148
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E +REYFSQFG + SV ++ ++ETG +R F F+EF D +K + + +L VE
Sbjct: 149 EKVVREYFSQFGPVASVKLLIDRETGRQRAFGFLEFVDPLSAEKALAPRKHWILQTLVE 207
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+++F+GGL ++ ++ +F Q+G + V ++ D T R R FGF+ + + + A++
Sbjct: 136 KRIFLGGLKEYHDEKVVREYFSQFGPVASVKLLIDRETGRQRAFGFLEFVDPLSAEKALA 195
Query: 77 NRPHNIDGRVVETKRAV 93
R H I +VE KR+
Sbjct: 196 PRKHWILQTLVEVKRST 212
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 102 EANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 160
E + ++K+F+GGL Q + LRE+FSQFG + ++ + + RGF F+ F D
Sbjct: 26 EGSEHLRKIFIGGLSTQTSMETLREFFSQFGVVSDAVVMRDPVSNHSRGFGFVTFVDPKS 85
Query: 161 VDKIVLSKITLLLDRRVE 178
V+ + ++ + ++ VE
Sbjct: 86 VEIVQRARPHTIDNKIVE 103
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E VD +
Sbjct: 222 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 281
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 282 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEET 338
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 339 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 380
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 309 KKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 368
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 369 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 409
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E VD +
Sbjct: 187 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 246
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 247 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEET 303
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 304 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 345
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 274 KKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 333
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 334 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 374
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 102/150 (68%), Gaps = 3/150 (2%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+FIGGL ++T+ E L+ +F ++G++ +V+VMKDP T+RSRGFGF+T+++A VD ++
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIES 135
+ PH +DG+ ++ K A PR P+ KK+FVGGL DD++ YF QFG +E
Sbjct: 62 SAPHELDGKKIDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPSTVDDVKGYFEQFGRVED 119
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K+T RGFAF+ F DVVDK+
Sbjct: 120 AMLMFDKQTNRHRGFAFVTFESEDVVDKVC 149
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL +T + ++ +FEQ+G + D ++M D T R RGF F+T+ +VD
Sbjct: 91 KKIFVGGLSAPSTVDDVKGYFEQFGRVEDAMLMFDKQTNRHRGFAFVTFESEDVVDKVCE 150
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 151 IHFHEINNKMVECKKAQPKE 170
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 108 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+KMF+GGL Q + LREYFS+FG + V ++ + T RGF F+ F D VDK++
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 167 S 167
S
Sbjct: 62 S 62
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT+SE VD+ +
Sbjct: 57 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 116
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P+ KK+FVGG+ +D D+++ YFSQFG +E
Sbjct: 117 PIHTLDGKKIDPKHATPKN---RPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEET 173
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 174 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 215
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
+P +K+F+GG+ T+ + ++A+F Q+G++ + V++ D TKR RGFGF+T+ +V
Sbjct: 139 QPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVV 198
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
D H I + VE K+A P++ + + A K++ + GL
Sbjct: 199 DRVCEIHFHTIKNKKVECKKAQPKEAV-QASAQLLGKRLMLSGL 241
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT+SE VD+ +
Sbjct: 42 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 101
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P+ KK+FVGG+ +D D+++ YFSQFG +E
Sbjct: 102 PIHTLDGKKIDPKHATPKN---RPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEET 158
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 159 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 200
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
+P +K+F+GG+ T+ + ++A+F Q+G++ + V++ D TKR RGFGF+T+ +V
Sbjct: 124 QPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVV 183
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
D H I + VE K+A P++ + + A K++ + GL
Sbjct: 184 DRVCEIHFHTIKNKKVECKKAQPKEAV-QASAQLLGKRLMLSGL 226
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 62/162 (38%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E VD +
Sbjct: 200 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 260 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEET 316
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 317 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 358
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 287 KKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 346
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 347 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 387
>gi|328711026|ref|XP_001943905.2| PREDICTED: hypothetical protein LOC100169433 [Acyrthosiphon pisum]
Length = 530
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 111/162 (68%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G++ +V++MKDPIT+RSRGFGFIT+S+A+ V+ ++
Sbjct: 219 KLFVGGLSWQTSADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAETVEKVLAV 278
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P+A + KK+FVGG+ +D D+++ YFSQFG +E
Sbjct: 279 PIHTLDGKKIDPKHATPKN---RPKAGSKTKKIFVGGVSQDTTADEVKAYFSQFGKVEET 335
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ ++ T RGF F+ F + D+VD I + +++VE
Sbjct: 336 VMLMDQHTKRHRGFGFVTFENDDIVDTICEIHFHTIKNKKVE 377
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ TT + ++A+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 306 KKIFVGGVSQDTTADEVKAYFSQFGKVEETVMLMDQHTKRHRGFGFVTFENDDIVDTICE 365
Query: 77 NRPHNIDGRVVETKRAVPRDEI 98
H I + VE K+A P++ +
Sbjct: 366 IHFHTIKNKKVECKKAQPKELV 387
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L +F +G + DV++MKDP+T+RSRGFGFIT+ E VD +
Sbjct: 183 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 242
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ K ++N T KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 243 PIHTLDGKKIDPKHATPKNR-PKTQSNKT-KKIFVGGVSQDTSAEEVKAYFSQFGKVEET 300
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 301 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 342
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 60/105 (57%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
T+ +K+F+GG+ T+ E ++A+F Q+G++ + V++ D TKR RGFGF+T+ +
Sbjct: 265 TQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 324
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
VD H I + VE K+A P++ + K++ +G L
Sbjct: 325 VDRVCEIHFHTIKNKKVECKKAQPKEAVAPTAQQLLQKRIILGNL 369
>gi|344235610|gb|EGV91713.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 146
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 94/131 (71%), Gaps = 1/131 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSRGFGF+TYS + VD AM +PH IDG VV KRAV R+ KP A+ TVK
Sbjct: 1 MRDPQTKRSRGFGFVTYSCVEEVDAAMCAQPHKIDGSVVAPKRAVSREGSIKPGAHLTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D EE +LR+YF ++G IE++ ++ ++++G KRGF F+ F+D+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFVFVTFDDHDTVDKIVVQ 120
Query: 168 KITLLLDRRVE 178
K + E
Sbjct: 121 KYLTINGHNCE 131
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD
Sbjct: 58 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFVFVTFDDHDTVDKI 117
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + I+G E K+A+ + E+
Sbjct: 118 VVQKYLTINGHNCEVKKALSKQEM 141
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 109/162 (67%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L +F +G++ DV++MKDPIT+RSRGFGFIT+ E VD +
Sbjct: 103 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVLKV 162
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ K ++N T KK+FVGG+ +D +++R+YFSQFG ++
Sbjct: 163 PIHTLDGKKIDPKHATPKNRP-KTQSNKT-KKIFVGGVSQDTSAEEVRQYFSQFGKVDET 220
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 221 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 262
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
T+ +K+F+GG+ T+ E ++ +F Q+G++ + V++ D TKR RGFGF+T+ +
Sbjct: 185 TQSNKTKKIFVGGVSQDTSAEEVRQYFSQFGKVDETVMLMDQQTKRHRGFGFVTFENEDV 244
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
VD H I + VE K+A P++ + K++ +G L
Sbjct: 245 VDRVCEIHFHTIKNKKVECKKAQPKEAVTPTAQQLLQKRIILGNL 289
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L +F +G++ DV++MKDPIT+RSRGFGFIT+ E VD +
Sbjct: 168 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVLKV 227
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ K ++N T KK+FVGG+ +D +++++YFSQFG +E
Sbjct: 228 PIHTLDGKKIDPKHATPKNR-PKTQSNKT-KKIFVGGVSQDTSAEEVKQYFSQFGKVEET 285
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F DVVD++ + +++VE
Sbjct: 286 VMLMDQQTKRHRGFGFVTFEHEDVVDRVCEIHFHTIKNKKVE 327
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
T+ +K+F+GG+ T+ E ++ +F Q+G++ + V++ D TKR RGFGF+T+ +
Sbjct: 250 TQSNKTKKIFVGGVSQDTSAEEVKQYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEHEDV 309
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
VD H I + VE K+A P++ + K++ +G L
Sbjct: 310 VDRVCEIHFHTIKNKKVECKKAQPKEAVTPTAQQLLQKRIILGNL 354
>gi|325179628|emb|CCA14026.1| heterogeneous nuclear ribonucleoprotein A1 putative [Albugo
laibachii Nc14]
Length = 618
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 22/190 (11%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
T+ L K+FIGGL Y TTDE L+++F +G + D VVMKDPI++RSRGFGFITY++
Sbjct: 2 TDASKLGKIFIGGLSYETTDEKLRSYFGAFGSVTDAVVMKDPISRRSRGFGFITYADPAC 61
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATV---------------------KK 109
VD A++ H +D R VE KRAVPR + + + T+ KK
Sbjct: 62 VDRALAQPSHVLDSRRVEAKRAVPRADNSREVVSTTIKPSGPIVLPTLNSACASGGATKK 121
Query: 110 MFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+FVGGL + +D + ++YF ++G + S ++ N+ET RGF F+ F + VD I+ +
Sbjct: 122 IFVGGLHYETKDAEFKKYFQKYGKVVSAEVMFNRETNKSRGFGFVIFENEQSVDLILNER 181
Query: 169 ITLLLDRRVE 178
++ + VE
Sbjct: 182 DHMIDGKLVE 191
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 60/92 (65%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+S C + +K+F+GGL Y T D + +F+++G++V VM + T +SRGFGF+ +
Sbjct: 110 NSACASGGATKKIFVGGLHYETKDAEFKKYFQKYGKVVSAEVMFNRETNKSRGFGFVIFE 169
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ VD ++ R H IDG++VE KRAVPR ++
Sbjct: 170 NEQSVDLILNERDHMIDGKLVEVKRAVPRTDV 201
>gi|301121326|ref|XP_002908390.1| heterogeneous nuclear ribonucleoprotein A1, putative [Phytophthora
infestans T30-4]
gi|262103421|gb|EEY61473.1| heterogeneous nuclear ribonucleoprotein A1, putative [Phytophthora
infestans T30-4]
Length = 632
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 23/186 (12%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGGL Y TTDE L+++F +G + D VVMKDPI++RSRGFGFITY++ VD A+
Sbjct: 7 LGKIFIGGLSYETTDEKLRSYFGAYGTVTDAVVMKDPISRRSRGFGFITYADPLCVDRAL 66
Query: 76 SNRPHNIDGRVVETKRAVPRDE----IGKPEANATV------------------KKMFVG 113
+ H +D R VE KRAVPR E IG +++ V KK+FVG
Sbjct: 67 AQPNHILDSRRVEAKRAVPRAESMRDIGNSASSSRVNGSTSISSISANSAVGATKKIFVG 126
Query: 114 GLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
GL + +D D ++YF Q+G + S ++ N+ET RGF F+ F V+ ++ K ++
Sbjct: 127 GLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEASVELVLQDKNHVI 186
Query: 173 LDRRVE 178
+ VE
Sbjct: 187 DGKSVE 192
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 59/97 (60%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL Y T D + +F Q+G++V VM + T +SRGFGF+ + V+ +
Sbjct: 121 KKIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEASVELVLQ 180
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVG 113
++ H IDG+ VE KRAVPR ++ P + ++ F G
Sbjct: 181 DKNHVIDGKSVEVKRAVPRTDVPPPRSVSSRGNSFSG 217
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 106/168 (63%), Gaps = 10/168 (5%)
Query: 6 DDSKCTEPESLR-------KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSR 58
+DS+ T P S K+FIGGL ++T E L+ +F ++G+I +V+VMKDP T+RSR
Sbjct: 33 NDSQPTNPASPTEAAHDPGKMFIGGLSWQTAPEGLREYFSKFGDITEVMVMKDPSTRRSR 92
Query: 59 GFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
GFGF+T+S+ VD ++N PH +DG+ ++ K A P+ P+ KK+FVGGL
Sbjct: 93 GFGFVTFSDPASVDKVLANGPHELDGKKIDPKIAFPKR--AHPKMVTRTKKVFVGGLSAP 150
Query: 119 EE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+D++ YF QFG IE ++ +K+T RGF F+ F + DVVDK+
Sbjct: 151 TTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVVDKVC 198
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+KVF+GGL TT E ++ +F+Q+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 140 KKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVVDKVCE 199
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 200 IHFHEINNKMVECKKAQPKE 219
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 137 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 196
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 197 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 253
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 254 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 295
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 224 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 283
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 284 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 324
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 188 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 247
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 248 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 304
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 305 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 346
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 275 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 334
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 335 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 375
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 264 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 320
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 321 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 362
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 351 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 391
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 175 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 234
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 235 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 291
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 292 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 333
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 262 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 321
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 322 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 362
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 148 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 207
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 208 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 264
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 265 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 306
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 235 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 294
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 295 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 335
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 236 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 292
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 293 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 334
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 263 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 322
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 323 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 363
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 207 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 266
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 267 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 323
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 324 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 365
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 294 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 353
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 354 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 394
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 264 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 320
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 321 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 362
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 351 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 391
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 205 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 264
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 265 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 321
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 322 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 363
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 292 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 351
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 352 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 392
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 264 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 320
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 321 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 362
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 351 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 391
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 236 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 292
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 293 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 334
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 263 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 322
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 323 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 363
>gi|432952652|ref|XP_004085179.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 240
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL T D+ L+ FEQ+G ++D V+ +RSR FGF+TY + + AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDFAVVPHKTAQRSRCFGFVTYLTPEEANAAMAA 66
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
PH ++G VE KRAVP+ + + EA VKK+FVGGLK D +EDDL +YFSQ+G +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQTDESEARDKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENS 126
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+++ K TG KRGF F+ F D D V + RVE
Sbjct: 127 EIMSEKTTGKKRGFGFVHFTDDYAADMAVAVPFHTVNGHRVE 168
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GGL ++ L +F Q+GE+ + +M + T + RGFGF+ +++ D A+
Sbjct: 96 VKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKTTGKKRGFGFVHFTDDYAADMAV 155
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE 119
+ H ++G VE K+AVP+ E M GG DQ+
Sbjct: 156 AVPFHTVNGHRVEVKKAVPKQE------------MQAGGCSDQQ 187
>gi|219521089|gb|AAI72047.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521464|gb|AAI72049.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521466|gb|AAI72057.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521468|gb|AAI72058.1| Hnrnpa1l2 protein [Mus musculus]
Length = 275
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 94/131 (71%), Gaps = 1/131 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSR FGF+TY+ + VD AM+ RPH +DGRVVE KRAV R++ P A+ TVK
Sbjct: 1 MRDPNTKRSRCFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQIPGAHLTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+ VGG+K D +E LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+
Sbjct: 61 KILVGGIKEDTKEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 120
Query: 168 KITLLLDRRVE 178
K + E
Sbjct: 121 KYHTVNGHNCE 131
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+ +GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 58 TVKKILVGGIKEDTKEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 117
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 118 VIQKYHTVNGHNCEVRKALSKQEM 141
>gi|390331824|ref|XP_003723360.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Strongylocentrotus purpuratus]
Length = 360
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 112/176 (63%), Gaps = 13/176 (7%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K EPE RK+F+GGL Y T +++++ +F Q+GEIVD V+KDP + +S+GFGF+T++
Sbjct: 3 EGKYKEPEQERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFA 62
Query: 67 EAKMVDDAMSNR---PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDD 122
K V+ M R PH +D R V+ +RA+ RDE G + K FVGG+ K+ E++
Sbjct: 63 SRKEVNKVMGARKENPHRLDNRAVDVRRAMARDEKGPKNPSF---KCFVGGIPKETTEEE 119
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LR YFSQFG I + + +K GF+FI ++D D VD+IV+ K + ++VE
Sbjct: 120 LRAYFSQFGQIVELALHLSK------GFSFITYDDTDCVDQIVMKKFHHINGKKVE 169
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K F+GG+ TT+E L+A+F Q+G+IV++ + S+GF FITY + VD +
Sbjct: 105 KCFVGGIPKETTEEELRAYFSQFGQIVELALH------LSKGFSFITYDDTDCVDQIVMK 158
Query: 78 RPHNIDGRVVETKRAVPRDEI 98
+ H+I+G+ VE K+A ++E+
Sbjct: 159 KFHHINGKKVEGKKAYSKEEM 179
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 109/162 (67%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+E+L+ +F Q+G+I D+ +M+D T RSRGFGF+T+++ VD+ +
Sbjct: 154 KMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDEVLKK 213
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PR+E K K+FVGG+ + E+D +YFSQFGTI
Sbjct: 214 Q-HVLDGKLIDPKRAIPREEQDK------TGKIFVGGIAAEVTEEDFTDYFSQFGTIIDA 266
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K L R +E
Sbjct: 267 QLMIDKDTGRSRGFGFVTYDSPDAVDRVCANKYVPLKGRSME 308
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ T+E +F Q+G I+D +M D T RSRGFGF+TY VD +N
Sbjct: 238 KIFVGGIAAEVTEEDFTDYFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAVDRVCAN 297
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANA 105
+ + GR +E KRA PR++ NA
Sbjct: 298 KYVPLKGRSMEIKRAEPRNQQQNQRTNA 325
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++TT ESL+ F ++GEI + +VMKDP TKRSRGFGF+TY + VD
Sbjct: 21 PNDPGKMFIGGLSWQTTVESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVD 80
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
+ N PH +D + V+ K A PR +P+ KK+FVGGL +D++ YFSQ+G
Sbjct: 81 TCLENGPHILDNKTVDPKVAFPRK--AQPKMVTRTKKIFVGGLSAATTVEDVKNYFSQYG 138
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K T RGF F+ F + DVVDK+
Sbjct: 139 KIEDAMLMFDKTTNRHRGFGFVTFENEDVVDKVC 172
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F Q+G+I D ++M D T R RGFGF+T+ +VD
Sbjct: 114 KKIFVGGLSAATTVEDVKNYFSQYGKIEDAMLMFDKTTNRHRGFGFVTFENEDVVDKVCE 173
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 174 IHFHEINKKMVECKKAQPKE 193
>gi|444730345|gb|ELW70732.1| Chromodomain-helicase-DNA-binding protein 2 [Tupaia chinensis]
Length = 976
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 104/158 (65%), Gaps = 24/158 (15%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDE L++ FEQWG +++ + V
Sbjct: 475 EPEQLRKLFIGGLSFETTDERLRSHFEQWGTLMNCM----------------------EV 512
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
D AM+ +PH +DGRVVE KRAV R++ + A+ TVKK+FVGG+K++ EE LR+ F Q+
Sbjct: 513 DAAMNAKPHKVDGRVVEPKRAVSREDSQRLGAHLTVKKIFVGGIKEETEEHHLRDDFEQY 572
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G E + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 573 GKTEVIKIMTDRGSG-KRGFAFVNFDDHDSVDKIVIQK 609
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ FEQ+G+ + +M D + + RGF F+ + + VD
Sbjct: 547 TVKKIFVGGIKEETEEHHLRDDFEQYGKTEVIKIMTDRGSGK-RGFAFVNFDDHDSVDKI 605
Query: 75 MSNRPHNIDGRVVETK---RAVPR--DEIGKPEANATVKKMF 111
+ + H ++G E K R V + ++ KP+ +V++
Sbjct: 606 VIQKYHTVNGHNCECKERMRPVKKALKQLDKPDKGLSVQEQL 647
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 104/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V +
Sbjct: 206 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVQKVLKV 265
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 266 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEET 322
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 323 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 364
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 293 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 352
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 353 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTLGVQ 393
>gi|402879932|ref|XP_003903574.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Papio anubis]
Length = 152
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSR FGF+TY+ + VD AM+ RPH +DGR VETKR + R +P A+ VK
Sbjct: 1 MRDPNTKRSRSFGFVTYATVEEVDTAMNARPHKVDGRAVETKRTISRGNSQRPGAHLAVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D EE LR+ F Q+G +E + ++T++ +G KRGFAF+ F+D+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEHHLRDNFEQYGKMEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 120
Query: 168 K 168
K
Sbjct: 121 K 121
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 53/90 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ FEQ+G++ + +M D + + RGF F+T+ + VD
Sbjct: 58 AVKKIFVGGIKEDTEEHHLRDNFEQYGKMEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 117
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 118 VIQKYHTVNGHNCEVRKALSKQEMASASSS 147
>gi|115629158|ref|XP_779906.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform 1 [Strongylocentrotus purpuratus]
Length = 360
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 13/171 (7%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+F+GGL Y T +++++ +F Q+GEIVD V+KDP + +S+GFGF+T++ K V
Sbjct: 8 EPEQERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKEV 67
Query: 72 DDAMSNR---PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYF 127
+ M R PH +D R V+ +RA+ RDE G + K FVGG+ K+ E++LR YF
Sbjct: 68 NKVMGARKENPHRLDNRAVDVRRAMARDEKGPKNPSF---KCFVGGIPKETTEEELRAYF 124
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
SQFG I + + +K GF+FI ++D D VD+IV+ K + ++VE
Sbjct: 125 SQFGQIVELALHLSK------GFSFITYDDTDCVDQIVMKKFHHINGKKVE 169
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K F+GG+ TT+E L+A+F Q+G+IV++ + S+GF FITY + VD +
Sbjct: 105 KCFVGGIPKETTEEELRAYFSQFGQIVELALH------LSKGFSFITYDDTDCVDQIVMK 158
Query: 78 RPHNIDGRVVETKRAVPRDEI 98
+ H+I+G+ VE K+A ++E+
Sbjct: 159 KFHHINGKKVEGKKAYSKEEM 179
>gi|358342147|dbj|GAA49679.1| heterogeneous nuclear ribonucleoprotein A1 A2/B1 homolog
[Clonorchis sinensis]
Length = 919
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 68/149 (45%), Positives = 100/149 (67%), Gaps = 3/149 (2%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGL+ T D L+ F+ ++G + D VVMKD I RSRGFGF+TY + +M + A +
Sbjct: 283 RKLFVGGLNPVTDDYRLREFYSKFGVVTDAVVMKD-IAGRSRGFGFVTYEDPQMAEVACN 341
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIES 135
RPH IDG++V+ K+AVP+ + P + V+K+F+GGL+ +D DL YFS+FG I
Sbjct: 342 ARPHEIDGKIVDAKKAVPKGD-AHPIPDIPVRKIFIGGLRRSVKDSDLFSYFSEFGQIVE 400
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ +KET RGF F+ F D D VD++
Sbjct: 401 AVVMMDKETNQSRGFGFVTFVDTDSVDRV 429
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+RK+FIGGL D L ++F ++G+IV+ VVM D T +SRGFGF+T+ + VD
Sbjct: 371 VRKIFIGGLRRSVKDSDLFSYFSEFGQIVEAVVMMDKETNQSRGFGFVTFVDTDSVDRVA 430
Query: 76 SNRPHNIDGRVVETKRAVPRDEI 98
+ H+I G V+ K+AV +D++
Sbjct: 431 NETLHSICGFPVDVKKAVAKDDL 453
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 92 AVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGF 150
A P + P N +K+FVGGL +D LRE++S+FG + +V G RGF
Sbjct: 267 AHPVITMSNPNCNMLERKLFVGGLNPVTDDYRLREFYSKFGVVTDA-VVMKDIAGRSRGF 325
Query: 151 AFIEFND 157
F+ + D
Sbjct: 326 GFVTYED 332
>gi|390331826|ref|XP_003723361.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Strongylocentrotus purpuratus]
Length = 330
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 13/171 (7%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+F+GGL Y T +++++ +F Q+GEIVD V+KDP + +S+GFGF+T++ K V
Sbjct: 17 EPEQERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKEV 76
Query: 72 DDAMSNR---PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYF 127
+ M R PH +D R V+ +RA+ RDE G + K FVGG+ K+ E++LR YF
Sbjct: 77 NKVMGARKENPHRLDNRAVDVRRAMARDEKGPKNPSF---KCFVGGIPKETTEEELRAYF 133
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
SQFG I + + +K GF+FI ++D D VD+IV+ K + ++VE
Sbjct: 134 SQFGQIVELALHLSK------GFSFITYDDTDCVDQIVMKKFHHINGKKVE 178
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K F+GG+ TT+E L+A+F Q+G+IV++ + S+GF FITY + VD +
Sbjct: 114 KCFVGGIPKETTEEELRAYFSQFGQIVELAL------HLSKGFSFITYDDTDCVDQIVMK 167
Query: 78 RPHNIDGRVVETKRAVPRDEI 98
+ H+I+G+ VE K+A ++E+
Sbjct: 168 KFHHINGKKVEGKKAYSKEEM 188
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 72/178 (40%), Positives = 113/178 (63%), Gaps = 11/178 (6%)
Query: 5 YDDSKCTEPESLR---KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
Y D + T +++ K+FIGGL++ TTDESL+ +F Q+GE+V+ VM+D T RSRGFG
Sbjct: 153 YGDPQATGSPAIKEDGKMFIGGLNWETTDESLKEYFSQYGEVVECTVMRDGPTGRSRGFG 212
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEE 120
F+T+ + K V+ M + H +DG++++ KRA+PRDE K K+FVGG+ ++ E
Sbjct: 213 FLTFKDPKTVNIVMV-KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATE 265
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
D REYF+QFG + ++ +K+TG RGF F+ F+ V+ + +LD+ +E
Sbjct: 266 TDFREYFTQFGRVLDATLMMDKDTGRPRGFGFVTFDSEGAVENALNCPTLAILDKPIE 323
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T+ + +F Q+G ++D +M D
Sbjct: 227 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATETDFREYFTQFGRVLDATLMMD 286
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V++A++ I + +E K+A PR I
Sbjct: 287 KDTGRPRGFGFVTFDSEGAVENALNCPTLAILDKPIEVKKAQPRGNI 333
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTDESL+ +FEQ+GE++D VM+D T RSRGFGF+T+ + K V MS
Sbjct: 121 KMFIGGLNWETTDESLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPKCVQVVMSK 180
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H++DG++++ KRA+PR+E K KMFVGG+ D E++ R++F+QFG +
Sbjct: 181 E-HHLDGKIIDPKRAIPREEQEK------TAKMFVGGVPADCTEEEFRDFFNQFGRVLDA 233
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F + V+ + + + VE
Sbjct: 234 TLMMDKDTGRPRGFGFVTFENEAAVENTMSQPYITIHGKPVE 275
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T+E + FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 199 EQEKTAKMFVGGVPADCTEEEFRDFFNQFGRVLDATLMMDKDTGRPRGFGFVTFENEAAV 258
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
++ MS I G+ VE KRA P+
Sbjct: 259 ENTMSQPYITIHGKPVEVKRATPK 282
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
T P S K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT+ EA
Sbjct: 25 TSP-SPSKLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQEAAS 83
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQ 129
VD ++ H +DG+ ++ K A P+ KP A KK+FVGG+ +D D++R YF+Q
Sbjct: 84 VDKVLAVPVHTLDGKRIDPKHATPKSAP-KP---AKTKKIFVGGVGQDTSADEVRAYFAQ 139
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG +E M+ +++T RGF F+ F+ + V+++ + +++VE
Sbjct: 140 FGAVEDAVMLMDQQTKRHRGFGFVTFHSEEAVERVCDIHFHTIKNKKVE 188
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 3 PRYDDSKCT-EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
P++ K +P +K+F+GG+ T+ + ++A+F Q+G + D V++ D TKR RGFG
Sbjct: 102 PKHATPKSAPKPAKTKKIFVGGVGQDTSADEVRAYFAQFGAVEDAVMLMDQQTKRHRGFG 161
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
F+T+ + V+ H I + VE KRA P++ +
Sbjct: 162 FVTFHSEEAVERVCDIHFHTIKNKKVECKRAQPKEAVA 199
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I +V+VMKDP T+RSRGFGFIT+++ VD
Sbjct: 118 PNDPGKMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVD 177
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ ++ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 178 KVLAQGTHELDGKKIDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 235
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 236 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 269
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 211 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 270
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 271 IHFHEINNKMVECKKAQPKE 290
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT++E VD +
Sbjct: 41 KLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +AN T KK+FVGG+ +D D+++ YF+QFG +E
Sbjct: 101 PIHTLDGKKIDPKHATPKNR--AKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEET 157
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 158 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 199
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ + ++A+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 128 KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 187
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I + VE K+A P++ + +P A A
Sbjct: 188 IHFHTIKNKKVECKKAQPKEAV-QPGALA 215
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 68/156 (43%), Positives = 104/156 (66%), Gaps = 8/156 (5%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+FIGGL++ TTDESL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K+V+ M
Sbjct: 225 KKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIVMV 284
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIES 135
+ H +DG++++ KRA+PRDE K K+FVGG+ + D + REYFSQFG +
Sbjct: 285 -KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSPETTDHEFREYFSQFGRVVD 337
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F V+ + +K+ L
Sbjct: 338 ATLMMDKDTGRPRGFGFVTFESEAGVEACLNAKLEL 373
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD + +F Q+G +VD +M D
Sbjct: 284 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSPETTDHEFREYFSQFGRVVDATLMMD 343
Query: 52 PITKRSRGFGFITY-SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
T R RGFGF+T+ SEA + +A N + G+ +E K+A PR + E
Sbjct: 344 KDTGRPRGFGFVTFESEAGV--EACLNAKLELHGKPIEVKKAQPRGNLRDDE 393
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 103 ANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 161
A A KKMF+GGL + D+ LR YFSQFG + ++ + TG RGF F+ F D VV
Sbjct: 220 AIAIAKKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVV 279
Query: 162 DKIVLSK 168
+ +++ +
Sbjct: 280 NIVMVKE 286
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 108/173 (62%), Gaps = 16/173 (9%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVFIGG+ + TT+E+L+ +F+ +G++V+ V+M+D +T R+RGFGFI +SE VD + +
Sbjct: 7 KVFIGGISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDRVLQD 66
Query: 78 RPHNIDGRVVETKRAVPRDE-----------IGKPEANATVKKMFVGGLKDQ-EEDDLRE 125
+ H IDGR VE KRAVPR+E +G A KK+FVGGL EDD +
Sbjct: 67 K-HTIDGRQVELKRAVPREEHQRNAQKSGSNVG---AGPRTKKIFVGGLAPTVTEDDFKG 122
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF QFGTI V ++ + + RGF FI F+ + VDK+V+ L D+ VE
Sbjct: 123 YFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVMKNFHELHDKTVE 175
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T++ + +FEQ+G I DVVVM D I++R RGFGFIT+ + VD +
Sbjct: 104 KKIFVGGLAPTVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVM 163
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H + + VE KRA+P++
Sbjct: 164 KNFHELHDKTVEVKRALPKE 183
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT++E VD +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +AN T KK+FVGG+ +D D+++ YF+QFG +E
Sbjct: 122 PIHTLDGKKIDPKHATPKNR--AKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEET 178
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 179 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 220
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ + ++A+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 149 KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 208
Query: 77 NRPHNIDGRVVETKRAVPRDEI 98
H I + VE K+A P++ +
Sbjct: 209 IHFHTIKNKKVECKKAQPKEAV 230
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT++E VD +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +AN T KK+FVGG+ +D D+++ YF+QFG +E
Sbjct: 122 PIHTLDGKKIDPKHATPKNR--AKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEET 178
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 179 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 220
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ + ++A+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 149 KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 208
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
H I + VE K+A P++ + +P A K++ +G L
Sbjct: 209 IHFHTIKNKKVECKKAQPKEAV-QPGALTLGKRVVLGAL 246
>gi|392343305|ref|XP_003754847.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Rattus norvegicus]
gi|392355808|ref|XP_003752141.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Rattus norvegicus]
Length = 264
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 109/159 (68%), Gaps = 5/159 (3%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E L+KVFIGGL ++TT+E L++ FE+W + D VVM+ P TKRSR FGF+ Y+ + V
Sbjct: 9 ELEQLQKVFIGGLSFKTTNEGLRSHFEEWETLTDCVVMRAPNTKRSRVFGFVIYATVEEV 68
Query: 72 DDAMSNRPHNIDG-RVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
D A++ RPH +DG VVE+KRA+ R++ + A+ TVK +F+ +K D EE L++YF Q
Sbjct: 69 DAAINARPHXVDGSSVVESKRALSREDSQRLGAHLTVKNIFLDVIKEDTEEHHLQDYFEQ 128
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ IE + ++ ++ +G KR + F+D D VDKIV+ K
Sbjct: 129 YSKIEVIEIMPDRGSGKKR---XVTFDDKDSVDKIVIQK 164
>gi|167516158|ref|XP_001742420.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779044|gb|EDQ92658.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 100/163 (61%), Gaps = 15/163 (9%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL TT + L +F+ +G++VD VVM DP T R+RGFGF+TY + + D +++
Sbjct: 1 KLFIGGLSPETTHDRLLDYFQVFGDVVDCVVMTDPATGRTRGFGFVTYRDGRCCDSVLAH 60
Query: 78 RPHNIDGRVVETKRAVPRDEI-----------GKPEANA---TVKKMFVGGLKDQEEDD- 122
RPH +DGR V+ KRAVPR E+ KP + + V+K+FVGGL ++
Sbjct: 61 RPHVVDGREVDPKRAVPRQEMESSPRSSSATRAKPRSASFTHHVRKVFVGGLPPTATNEM 120
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
L YFS FG +E ++ +K+T RGF F+ F D + DK+V
Sbjct: 121 LHRYFSHFGGVEEAVIIHDKQTRTPRGFGFVTFEDPIIADKVV 163
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 3 PRYDDSKCTEPES------LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKR 56
PR + +P S +RKVF+GGL T+E L +F +G + + V++ D T+
Sbjct: 85 PRSSSATRAKPRSASFTHHVRKVFVGGLPPTATNEMLHRYFSHFGGVEEAVIIHDKQTRT 144
Query: 57 SRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
RGFGF+T+ + + D +S H G++VE KRA P+ + K
Sbjct: 145 PRGFGFVTFEDPIIADKVVSVHYHEFYGKMVEVKRAEPKADASK 188
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 109 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+F+GGL + D L +YF FG + ++T+ TG RGF F+ + D D ++
Sbjct: 1 KLFIGGLSPETTHDRLLDYFQVFGDVVDCVVMTDPATGRTRGFGFVTYRDGRCCDSVLAH 60
Query: 168 KITLLLDRRVE 178
+ ++ R V+
Sbjct: 61 RPHVVDGREVD 71
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L +F +G + DV++MKDP+T+RSRGFGFIT+ E VD +
Sbjct: 112 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 171
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ K ++N T KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 172 PIHTLDGKKIDPKHATPKNRP-KTQSNKT-KKIFVGGVSQDTSAEEVKAYFSQFGKVEET 229
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 230 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 271
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
T+ +K+F+GG+ T+ E ++A+F Q+G++ + V++ D TKR RGFGF+T+ +
Sbjct: 194 TQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 253
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
VD H I + VE K+A P++ + K++ +G L
Sbjct: 254 VDRVCEIHFHTIKNKKVECKKAQPKEAVAPTAQQLLQKRIILGNL 298
>gi|324514688|gb|ADY45952.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 448
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 107/182 (58%), Gaps = 24/182 (13%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P LRK+FIGGL + TTDE L+ F+ QWG +VD +V++DP TK SRGFGF+T++ +M +
Sbjct: 138 PPQLRKLFIGGLSHETTDEQLRLFYSQWGNVVDCIVIRDPQTKYSRGFGFVTFATMQMAE 197
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEI-------------GKPEANATVKKMFVGGLKDQE 119
AM++RPH I+ +VV+ KRA+PR+++ G+P+ K+ + G+ +
Sbjct: 198 AAMADRPHTINNKVVDPKRAIPREQMSPMLPNHPPPFLEGEPDPGC---KLSLSGIHWEY 254
Query: 120 E--DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK-IVLSKITLLLDRR 176
D LR YF FG +E V ++ N RGF F+ F + D+ + K+ ++ R
Sbjct: 255 HTVDVLRHYFDTFGVVEQVEILGN-----PRGFGFVVFEEKSAADRCLAHGKVHMINGRN 309
Query: 177 VE 178
E
Sbjct: 310 CE 311
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 98 IGKPEANATV--------KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKR 148
+G P NA + +K+F+GGL + D+ LR ++SQ+G + ++ + +T R
Sbjct: 124 VGHPSNNAQLNGEGPPQLRKLFIGGLSHETTDEQLRLFYSQWGNVVDCIVIRDPQTKYSR 183
Query: 149 GFAFIEF 155
GF F+ F
Sbjct: 184 GFGFVTF 190
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 59/162 (36%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ + V+ +
Sbjct: 211 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEKVLKV 270
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +P KK+FVGG+ +D ++++ YF+QFG +E
Sbjct: 271 PIHTLDGKKIDPKHATPKN---RPRQANKTKKIFVGGVSQDTSAEEVKAYFAQFGPVEET 327
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 328 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 369
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 298 KKIFVGGVSQDTSAEEVKAYFAQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 357
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
H I + VE K+A P++ + P A K++ +G L Q
Sbjct: 358 IHFHTIKNKKVECKKAQPKESV-TPAAQLLQKRIMLGSLGVQ 398
>gi|196004432|ref|XP_002112083.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
gi|190585982|gb|EDV26050.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
Length = 331
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+E LQ +F ++G IV + DPIT RSRGF F+T++ VD + +
Sbjct: 74 KMFIGGLNWETTEEGLQKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFANPADVDKVLES 133
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
PH +D R V+ KRA+P + + + KK+F+GGL + E L+E+FS+FG I V
Sbjct: 134 GPHQLDNRTVDPKRALPLHKQIQLKGQHRTKKIFIGGLGAEHTESSLKEFFSEFGNILDV 193
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
VT+K T +RGF F+ F+ + VDK + ++ R+VE
Sbjct: 194 EFVTDKLTRKRRGFCFLSFDTEEAVDKACEKQFHVVSGRQVE 235
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+FIGGL T+ SL+ FF ++G I+DV + D +T++ RGF F+++ + VD A
Sbjct: 164 KKIFIGGLGAEHTESSLKEFFSEFGNILDVEFVTDKLTRKRRGFCFLSFDTEEAVDKACE 223
Query: 77 NRPHNIDGRVVETKRAVPRDEIGK 100
+ H + GR VE KRA P+D+ +
Sbjct: 224 KQFHVVSGRQVEIKRATPKDQASR 247
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT++E VD +
Sbjct: 41 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +AN T KK+FVGG+ +D ++++ YF+QFG +E
Sbjct: 101 PIHTLDGKKIDPKHATPKNRAK--QANRT-KKIFVGGVSQDTSSEEVKAYFNQFGKVEET 157
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 158 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 199
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 128 KKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 187
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
H I + VE K+A P++ + + A A K++ +G L
Sbjct: 188 IHFHTIKNKKVECKKAQPKEAVQQ-GALALGKRVVLGAL 225
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 13/188 (6%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R +S +E E +K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+
Sbjct: 63 RTRESMPSEQEERKKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFV 122
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMF 111
+ + V +++RPH +DGR ++ K PR + G N+ K+F
Sbjct: 123 KFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIF 182
Query: 112 VGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKIT 170
VGG+ + E +LREYF +FG + V M+ + E RGF FI F D VD+ V
Sbjct: 183 VGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFH 242
Query: 171 LLLDRRVE 178
++ ++VE
Sbjct: 243 DIMGKKVE 250
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 171 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 224
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 225 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 270
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +FEQ+GE++D VM+D T RSRGFGF+T+ K V++ MS
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMS- 222
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H++DG++++ KRA+PR+E K KMFVGG+ D E++ R +F+QFG +
Sbjct: 223 KEHHLDGKIIDPKRAIPREEQEK------TAKMFVGGVPGDCTEEEFRNFFNQFGRVLDA 276
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ + + V+ + + + VE
Sbjct: 277 TLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVE 318
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T+E + FF Q+G ++D +M D T R RGFGF+TY V
Sbjct: 242 EQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAV 301
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
+ MS I G+ VE KRA P+
Sbjct: 302 EATMSQPYITIHGKPVEVKRATPK 325
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 106/162 (65%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G I DV++MKDP+T+RSRGFGFIT+ E V++ +
Sbjct: 60 KLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVENVLKV 119
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P+ G+ + N KK+FVGG+ +D D+++ YFSQFG +E
Sbjct: 120 PVHTLDGKKIDPKHATPK---GRGKTNGKTKKIFVGGVSQDTSSDEVKVYFSQFGKVEEA 176
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + + VD++ + +++VE
Sbjct: 177 VMLMDQQTKRHRGFGFVTFENEETVDRVCEIHFHNIKNKKVE 218
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ + ++ +F Q+G++ + V++ D TKR RGFGF+T+ + VD
Sbjct: 147 KKIFVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKRHRGFGFVTFENEETVDRVCE 206
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
HNI + VE K+A+P++ + K+M VG L
Sbjct: 207 IHFHNIKNKKVECKKAMPKEVV---AGTLLGKRMVVGPL 242
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
S P K+FIGGL ++T+ ESL+ +F ++G+I +V+VMKDP T+RSRGFGFIT+++
Sbjct: 13 SPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFAD 72
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREY 126
VD ++ H +DG+ ++ K A PR P+ KK+FVGGL +D++ Y
Sbjct: 73 PASVDKVLAQGTHELDGKKIDPKVAFPRRT--HPKMVTRTKKIFVGGLSAPTTLEDVKNY 130
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
F QFG IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 131 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 169
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 171 IHFHEINNKMVECKKAQPKE 190
>gi|430813105|emb|CCJ29521.1| unnamed protein product [Pneumocystis jirovecii]
Length = 397
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%), Gaps = 8/161 (4%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTDESL+A+FEQ+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PR+E K KMFVGG+ +D ED+ RE+FS FG +
Sbjct: 61 -HYLDGKIIDPKRAIPREEQEK------TAKMFVGGVSQDCTEDEFREFFSAFGRVIDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F V+ + + D+++E
Sbjct: 114 LMIDKDTGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQIE 154
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T++ + FF +G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTAKMFVGGVSQDCTEDEFREFFSAFGRVIDATLMIDKDTGRPRGFGFVTFESDAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
++AMS I + +E KRA P+ I
Sbjct: 138 ENAMSQPYLAIHDKQIEVKRATPKGNI 164
>gi|432955934|ref|XP_004085635.1| PREDICTED: deleted in azoospermia protein 1-like, partial [Oryzias
latipes]
Length = 502
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL T D+ L+ FEQ+G + D VV+++ +RSR FGF+TYS + + AM+
Sbjct: 15 KLFIGGLCVNTNDDGLRKHFEQFGTLTDFVVLQNKNAQRSRCFGFVTYSTPEETNAAMAA 74
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH ++G VE KRA+P+ + K EA A +K+FVGGLK+ +E L +YFS++G +E
Sbjct: 75 APHTVEGNSVEVKRAIPKAKDNKSEAFAKGEKIFVGGLKNNIKEYHLTDYFSRYGPVEKS 134
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ KETG KRGF F+ F + D ++ K + VE
Sbjct: 135 EILLEKETGKKRGFGFVHFTHHKTADLALVEKYHTVNGHLVE 176
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 59 GFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
GFGF+TYS + + AM+ PH + V+ K AVP+ + A A +K+FVGGLK+
Sbjct: 370 GFGFVTYSTPEETNAAMAASPHTVQRNSVKVKVAVPKGKANGSAAPAKGEKIFVGGLKNN 429
Query: 119 -EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRV 177
EE L YFS++G +E ++ KETG KRGF F+ F + D ++ K + V
Sbjct: 430 IEEFHLTNYFSRYGQVEKSEILLEKETGKKRGFGFVHFTHHKTADLALVEKYHTVNGHLV 489
Query: 178 E 178
E
Sbjct: 490 E 490
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Query: 60 FGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ- 118
FGF+TYS + + AM+ PH + V+ K AVP+ + A A +K+FVGGLK+
Sbjct: 214 FGFVTYSTPEETNAAMAAAPHTVQRNSVKVKGAVPKAKANGSAAPAKGEKIFVGGLKNNI 273
Query: 119 EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EE L +YFS++G +E ++ KETG KRGF F+ F + D ++ K + VE
Sbjct: 274 EEYHLTDYFSRYGPVEKSEILLEKETGKKRGFGFVHFTHHKTADLALVEKYHTVNGHLVE 333
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
P+ + P K+F+GGL + L +F ++G++ ++ + T + RGFGF
Sbjct: 405 PKGKANGSAAPAKGEKIFVGGLKNNIEEFHLTNYFSRYGQVEKSEILLEKETGKKRGFGF 464
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ ++ K D A+ + H ++G +VE K+AV + E+
Sbjct: 465 VHFTHHKTADLALVEKYHTVNGHLVEVKKAVAKQEM 500
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
P+ + P K+F+GGL + L +F ++G + ++ + T + RGFGF
Sbjct: 248 PKAKANGSAAPAKGEKIFVGGLKNNIEEYHLTDYFSRYGPVEKSEILLEKETGKKRGFGF 307
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ ++ K D A+ + H ++G +VE K+AV + E+
Sbjct: 308 VHFTHHKTADLALVEKYHTVNGHLVEIKKAVAKQEM 343
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
P+ D+K K+F+GGL + L +F ++G + ++ + T + RGFGF
Sbjct: 91 PKAKDNKSEAFAKGEKIFVGGLKNNIKEYHLTDYFSRYGPVEKSEILLEKETGKKRGFGF 150
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ ++ K D A+ + H ++G +VE K+AV + E+
Sbjct: 151 VHFTHHKTADLALVEKYHTVNGHLVEVKKAVAKQEM 186
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 107 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 156
V K+F+GGL DD LR++F QFGT+ ++ NK R F F+ ++
Sbjct: 13 VCKLFIGGLCVNTNDDGLRKHFEQFGTLTDFVVLQNKNAQRSRCFGFVTYS 63
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 13/179 (7%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P RK+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 52 PPGSRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVG 111
Query: 73 DAMSNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQE 119
+++RPH +DGR ++ K PR + G N K+FVGG+ +
Sbjct: 112 TVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCG 171
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E +LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 172 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 230
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D++K K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 151 PRSDNNKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 204
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEANATVKKM 110
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+ ++
Sbjct: 205 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQVPGQPGASQWGSRL 256
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
S P K+FIGGL ++T+ ESL+ +F ++G+I +V+VMKDP T+RSRGFGFIT+++
Sbjct: 13 SPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFAD 72
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREY 126
VD ++ H +DG+ ++ K A PR P+ KK+FVGGL +D++ Y
Sbjct: 73 PASVDKVLAQGNHELDGKKIDPKVAFPRRT--HPKMVTRTKKIFVGGLSAPTTLEDVKNY 130
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
F QFG IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 131 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 169
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 171 IHFHEINNKMVECKKAQPKE 190
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT++E VD +
Sbjct: 56 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 115
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +AN T KK+FVGG+ +D ++++ YF+QFG +E
Sbjct: 116 PIHTLDGKKIDPKHATPKNRAK--QANRT-KKIFVGGVSQDTSSEEVKAYFNQFGKVEET 172
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 173 VMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 214
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 143 KKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 202
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
H I + VE K+A P++ + +P A A K++ +G L
Sbjct: 203 IHFHTIKNKKVECKKAQPKEAV-QPGALALGKRVVLGAL 240
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
S P K+FIGGL ++T+ ESL+ +F ++G+I +V+VMKDP T+RSRGFGFIT+++
Sbjct: 13 SPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFAD 72
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREY 126
VD ++ H +DG+ ++ K A PR P+ KK+FVGGL +D++ Y
Sbjct: 73 PASVDKVLAQGNHELDGKKIDPKVAFPRRT--HPKMVTRTKKIFVGGLSAPTTLEDVKNY 130
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
F QFG IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 131 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 169
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 171 IHFHEINNKMVECKKAQPKE 190
>gi|291233795|ref|XP_002736841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein at 27C-like
[Saccoglossus kowalevskii]
Length = 540
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/156 (39%), Positives = 99/156 (63%), Gaps = 5/156 (3%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E + K+F+GGL + +T +SLQ F ++GE++D V+MKDPIT+RSRGFGF+ + + V
Sbjct: 5 EEIGKIFVGGLSWESTQDSLQKHFMKYGEVIDCVIMKDPITQRSRGFGFVKFKDPVCVQT 64
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEA----NATVKKMFVGGLKDQ-EEDDLREYFS 128
A++ PH +DGR ++ K PR + K + + VKK+F+GG+ EDD+ +FS
Sbjct: 65 ALAGAPHILDGRTIDPKPCTPRSQQQKTQQMGQFSGRVKKVFIGGIPPNCNEDDINNFFS 124
Query: 129 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
QFG + M+ +++ RGF F+ F D+V+K+
Sbjct: 125 QFGQVTEFIMMYDQQQKRPRGFGFLSFESEDIVEKV 160
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++KVFIGG+ ++ + FF Q+G++ + ++M D KR RGFGF+++ +V+
Sbjct: 102 VKKVFIGGIPPNCNEDDINNFFSQFGQVTEFIMMYDQQQKRPRGFGFLSFESEDIVEKVC 161
Query: 76 SNRPHNIDGRVVETKRAVPRD 96
+ R H I+G+ VE K+A PRD
Sbjct: 162 TIRYHTINGKTVECKKAEPRD 182
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 13/175 (7%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 63 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 122
Query: 77 NRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDDL 123
+RPH +DGR ++ K PR + G N+ K+FVGG+ + E +L
Sbjct: 123 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 182
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 183 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 237
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 158 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 211
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 212 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 257
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 13/175 (7%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 93 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 152
Query: 77 NRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDDL 123
+RPH +DGR ++ K PR + G N+ K+FVGG+ + E +L
Sbjct: 153 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 212
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 213 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 267
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 6/107 (5%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 188 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 241
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKK 109
IT+ + + VD A++ H+I G+ VE KRA PRD +P +
Sbjct: 242 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQPPGQPGASQ 288
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 25 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 84
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ V+ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 85 KVLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 142
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 143 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 176
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 178 IHFHEINNKMVECKKAQPKE 197
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 13/175 (7%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 48 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 107
Query: 77 NRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDDL 123
+RPH +DGR ++ K PR + G N+ K+FVGG+ + E +L
Sbjct: 108 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 167
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 168 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 222
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 143 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 196
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 197 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 242
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 101/154 (65%), Gaps = 8/154 (5%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGL + TT+E + FE++GE+V+ ++++DP+TKRSRGFGFI Y +D A+
Sbjct: 3 RKLFVGGLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKALL 62
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIES 135
+ H IDG+ VE KR+VPR++ KK+F+GGL D DL+ YF ++G +
Sbjct: 63 HATHVIDGKQVEPKRSVPREQ-------TRTKKIFIGGLPPNTSDEDLKIYFGKYGVVSE 115
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKI 169
V ++ +KETG RGF F+ F+ + K +++K+
Sbjct: 116 VELLRDKETGRLRGFGFVSFDTPEGAQKALVTKM 149
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 52/79 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+FIGGL T+DE L+ +F ++G + +V +++D T R RGFGF+++ + A+
Sbjct: 87 KKIFIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDKETGRLRGFGFVSFDTPEGAQKALV 146
Query: 77 NRPHNIDGRVVETKRAVPR 95
+ H I+G++ + K+A P+
Sbjct: 147 TKMHEINGKMAQVKKAEPK 165
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+FVGGL + E+ RE+F +FG + + ++ + T RGF FI + + +DK +L
Sbjct: 3 RKLFVGGLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKALL 62
Query: 167 SKITLLLDRRVE 178
++ ++VE
Sbjct: 63 HATHVIDGKQVE 74
>gi|148705158|gb|EDL37105.1| mCG15001 [Mus musculus]
Length = 132
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + T DES ++ FEQWG + D V M+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFATADESQRSHFEQWGVLTDCVGMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD 117
D AM+ RPH +DGRVVE KRAV R++ + A+ TVKK+ VGG+K+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSHRLGAHLTVKKILVGGIKE 114
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL D+ R +F Q+G + + + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFATADESQRSHFEQWGVLTDCVGMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 13/175 (7%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 35 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 94
Query: 77 NRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDDL 123
+RPH +DGR ++ K PR + G N+ K+FVGG+ + E +L
Sbjct: 95 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 154
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 155 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 209
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 130 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 183
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 184 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 229
>gi|312095606|ref|XP_003148410.1| hypothetical protein LOAG_12851 [Loa loa]
Length = 233
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 20/185 (10%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+S+C P RK+FIGGL + TTDE L+ ++ QWG +VD +V++DP TK SRGFGF+T++
Sbjct: 54 NSEC--PPQPRKLFIGGLSHETTDEQLRQYYSQWGTVVDCIVIRDPQTKYSRGFGFVTFA 111
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK----------KMFVGGLK 116
+M + AM++RPH I+ +VV+ KRA+PR+++ N K+ + G+
Sbjct: 112 TIQMAEAAMADRPHTINNKVVDPKRAIPREQMSPLLPNHPPSFLEIEPDPGCKLSLSGIH 171
Query: 117 DQEE--DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV-LSKITLLL 173
DDLR+YF FGT+E V ++ N RG F+ F DK + KI ++
Sbjct: 172 WAWHTVDDLRQYFDNFGTVEQVEILGN-----PRGLGFVVFESKPSADKCLEHGKIHIIN 226
Query: 174 DRRVE 178
++ E
Sbjct: 227 GQKCE 231
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 25 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 84
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ V+ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 85 KVLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 142
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 143 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 176
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 178 IHFHEINNKMVECKKAQPKE 197
>gi|170585802|ref|XP_001897671.1| heterogeneous nuclear ribonucleoprotein A1,putative [Brugia malayi]
gi|158594978|gb|EDP33555.1| heterogeneous nuclear ribonucleoprotein A1,putative [Brugia malayi]
Length = 355
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 20/185 (10%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+S+C P RK+FIGGL + TTDE L+ ++ QWG +VD +V++DP TK SRGFGF+T++
Sbjct: 44 NSEC--PPQPRKLFIGGLSHETTDEQLRQYYSQWGTVVDCIVIRDPQTKYSRGFGFVTFA 101
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK----------KMFVGGLK 116
+M + AM++RPH I+ +VV+ KRA+PR+++ N K+ + G+
Sbjct: 102 TIQMAEAAMADRPHTINNKVVDPKRAIPREQMSPLLPNHPPSFLEIEPDPGCKLSLSGIH 161
Query: 117 DQEE--DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV-LSKITLLL 173
DDLR+YF FGT+E V ++ G RG F+ F + DK + KI ++
Sbjct: 162 WAWHTVDDLRQYFDNFGTVEQVEIL-----GNPRGLGFVVFENKSSADKCLEHGKIHIIN 216
Query: 174 DRRVE 178
++ E
Sbjct: 217 GQKCE 221
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 272
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 273 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 304 KFIDFKDRKIEIKRAEPR 321
>gi|156361834|ref|XP_001625489.1| predicted protein [Nematostella vectensis]
gi|156212325|gb|EDO33389.1| predicted protein [Nematostella vectensis]
Length = 164
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 97/150 (64%), Gaps = 3/150 (2%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGL T LQ +FE++GE+ D V+M DP+TKRSR FGFIT+ + +V + M
Sbjct: 1 RKIFVGGLAISTDSAGLQGYFEKYGEVTDCVLMTDPVTKRSRCFGFITFRDPSVVQNVMD 60
Query: 77 NRPHNIDGRVVETKRAVPRDE-IGKPEANATVK-KMFVGGLKDQ-EEDDLREYFSQFGTI 133
++PH +DG++++ K AVPR G P+ N + K+FVGGL + DL +YF+ +G +
Sbjct: 61 DKPHQLDGKMIDPKPAVPRGPGQGPPQGNQNNEFKIFVGGLAHSTSKQDLEDYFTAYGKV 120
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDK 163
SVN++ + +T RGF F+ F D V K
Sbjct: 121 VSVNLMVDPQTQKMRGFGFVTFESKDSVTK 150
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T+ + L+ +F +G++V V +M DP T++ RGFGF+T+ V A
Sbjct: 95 KIFVGGLAHSTSKQDLEDYFTAYGKVVSVNLMVDPQTQKMRGFGFVTFESKDSVTKAADE 154
Query: 78 RPHNIDGRVV 87
H I+G+ V
Sbjct: 155 HYHQINGKTV 164
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+K+FVGGL + L+ YF ++G + ++T+ T R F FI F D VV ++
Sbjct: 1 RKIFVGGLAISTDSAGLQGYFEKYGEVTDCVLMTDPVTKRSRCFGFITFRDPSVVQNVM 59
>gi|297278753|ref|XP_002801608.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Macaca
mulatta]
Length = 130
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+S + FE+WG + D VVM+DP TK SRGFG +T S + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSFREHFEKWGTLTDCVVMRDPQTKHSRGFGSVTCSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
D AM +PH +DGRVV+ KRAV R++ KP A+ TVK +FVGG+K D EE +LRE
Sbjct: 68 DAAMCAQPHKVDGRVVKPKRAVSREDSVKPGAHLTVKNIFVGGVKEDTEEYNLRELL 124
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P ++K+F+GGL + DD RE+F ++GT+ ++ + +T RGF + + +
Sbjct: 6 PNEPEQLRKLFIGGLSFETTDDSFREHFEKWGTLTDCVVMRDPQTKHSRGFGSVTCSCVE 65
Query: 160 VVDKIVLSK 168
VD + ++
Sbjct: 66 EVDAAMCAQ 74
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 147 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 206
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 207 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 259
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 260 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 301
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 231 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 290
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 291 KFIDFKDRKIEIKRAEPR 308
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 95 RDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
++E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 133 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 192
Query: 154 EFNDYDVVDKIVLSKITLLLDRRV 177
F VD++V K +LD +V
Sbjct: 193 SFEKPSSVDEVV--KTQHILDGKV 214
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 272
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 273 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 304 KFIDFKDRKIEIKRAEPR 321
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 272
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 273 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 304 KFIDFKDRKIEIKRAEPR 321
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 272
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 273 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 304 KFIDFKDRKIEIKRAEPR 321
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 162 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 221
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 222 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 274
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 275 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 316
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 246 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 305
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 306 KFIDFKDRKIEIKRAEPR 323
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 272
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 273 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 304 KFIDFKDRKIEIKRAEPR 321
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 95 RDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
++E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 154 EFNDYDVVDKIVLSKITLLLDRRV 177
F VD++V K +LD +V
Sbjct: 206 SFEKPSSVDEVV--KTQHILDGKV 227
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 163 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 222
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 223 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 275
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 276 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 317
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 247 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 306
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 307 KFIDFKDRKIEIKRAEPR 324
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 87 VETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETG 145
E + A ++E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG
Sbjct: 141 TEQQVAQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATG 200
Query: 146 AKRGFAFIEFNDYDVVDKIVLSKITLLLDRRV 177
RGF F+ F VD++V K +LD +V
Sbjct: 201 RSRGFGFLSFEKPSSVDEVV--KTQHILDGKV 230
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 13/174 (7%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 213 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 272
Query: 78 RPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
RPH +DGR ++ K PR + G N+ K+FVGG+ E +LR
Sbjct: 273 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 332
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 333 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 386
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 307 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 360
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 361 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 394
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 272
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 273 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 304 KFIDFKDRKIEIKRAEPR 321
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 95 RDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
++E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 154 EFNDYDVVDKIVLSKITLLLDRRV 177
F VD++V K +LD +V
Sbjct: 206 SFEKPSSVDEVV--KTQHILDGKV 227
>gi|351695197|gb|EHA98115.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Heterocephalus
glaber]
Length = 282
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 92/157 (58%), Gaps = 39/157 (24%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL++ TT+ESL+ +++QWG++ D VV++DP +KRSRG GF+T+S V
Sbjct: 23 EKEQFRKLFIGGLNFETTEESLRNYYKQWGKLTDCVVLRDPASKRSRGSGFVTFSSMGEV 82
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RPH+IDGRVVE KRAV R+E GK + TVKK
Sbjct: 83 DAAMAARPHSIDGRVVEPKRAVAREESGKSGTHVTVKK---------------------- 120
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
GF F+ F+D+D VDKIVL K
Sbjct: 121 -----------------GFGFVTFDDHDPVDKIVLQK 140
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RG F+ F+ VD +
Sbjct: 28 RKLFIGGLNFETTEESLRNYYKQWGKLTDCVVLRDPASKRSRGSGFVTFSSMGEVDAAMA 87
Query: 167 SKITLLLDRRVE 178
++ + R VE
Sbjct: 88 ARPHSIDGRVVE 99
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 272
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 273 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + R +E KRA PR
Sbjct: 304 KFIDFKDRKIEIKRAEPR 321
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 95 RDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
++E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 154 EFNDYDVVDKIVLSKITLLLDRRV 177
F VD++V K +LD +V
Sbjct: 206 SFEKPSSVDEVV--KTQHILDGKV 227
>gi|344284992|ref|XP_003414248.1| PREDICTED: hypothetical protein LOC100654996 [Loxodonta africana]
Length = 595
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 324 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 382
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 383 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 436
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 437 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 483
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 419 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 478
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 479 IMEKKYHNVGLSKCEIKVAMSKE 501
>gi|432112509|gb|ELK35247.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 168
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSRG GF+TY+ + VD AM++RPH +DGRVVE KRAV R++ +P A+ TVK
Sbjct: 1 MRDPNTKRSRGCGFVTYATVEEVDTAMNSRPHKVDGRVVEPKRAVSREDSQRPGAHLTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
K+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D++
Sbjct: 61 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHN 112
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+
Sbjct: 58 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 108
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 26 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 85
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ V+ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 86 KVLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 143
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 144 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 177
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 119 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 178
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 179 IHFHEINNKMVECKKAQPKE 198
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 35 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 94
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ V+ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 95 KVLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 152
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 153 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 186
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 128 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 187
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 188 IHFHEINNKMVECKKAQPKE 207
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 13/175 (7%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 27 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 86
Query: 77 NRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDDL 123
+RPH +DGR ++ K PR + G N K+FVGG+ + E +L
Sbjct: 87 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETEL 146
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 147 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 201
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D++K K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 122 PRSDNNKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 175
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 176 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQVPGQPGAS 221
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T E L+ +F ++GEI +V+VMKDP T+RSRGFGF+T+++ V+ ++N
Sbjct: 23 KMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPASVEKVLAN 82
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESV 136
PH +DG+ ++ K A P+ P+ KK+FVGGL +D++ YF QFG IE
Sbjct: 83 GPHELDGKKIDPKIAFPKR--AHPKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRIEDA 140
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+T RGF F+ F DVVDK+ + ++ VE
Sbjct: 141 MLMFDKQTNRHRGFGFVTFELEDVVDKVCEVHFHEINNKMVE 182
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+KVF+GGL TT E ++ +F+Q+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 111 KKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFELEDVVDKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 171 VHFHEINNKMVECKKAQPKE 190
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 87 VETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETG 145
+E++ AV + EA KMF+GGL Q + LREYFS+FG I V ++ + T
Sbjct: 1 MESEVAVQSNSSSPNEAAHDPGKMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTR 60
Query: 146 AKRGFAFIEFNDYDVVDKIV 165
RGF F+ F D V+K++
Sbjct: 61 RSRGFGFVTFADPASVEKVL 80
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 39 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 98
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ V+ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 99 KVLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 156
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 157 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 190
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 191
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 192 IHFHEINNKMVECKKAQPKE 211
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++TT E L+ FE++GE+ + VVM+DP+TKRSRGFGF+T+ + K VD +++
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+DG+ ++ K AVP+ K T KK+F+GGL + E+D+++YFSQFG I
Sbjct: 61 GAQELDGKKIDPKLAVPKRAPAK--MVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKITET 118
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DK ++ L+ +++VE
Sbjct: 119 MLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVE 160
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+ +K+FIGGL T++E ++ +F Q+G+I + ++M D T+R RGFGF+T+ D A
Sbjct: 87 TTKKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRGFGFVTFESENSADKA 146
Query: 75 MSNRPHNIDGRVVETKRAVPRD 96
+ H I+ + VE K+A P++
Sbjct: 147 CDTQYHLINNKKVEVKKAQPKE 168
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 25 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 84
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ V+ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 85 KVLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 142
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 143 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 176
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 178 IHFHEINNKMVECKKAQPKE 197
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 39 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 98
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ V+ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 99 KVLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 156
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 157 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 190
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 191
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 192 IHFHEINNKMVECKKAQPKE 211
>gi|225708562|gb|ACO10127.1| Heterogeneous nuclear ribonucleoprotein A0 [Osmerus mordax]
Length = 308
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL+ T ++ L+ FEQ+GE+ D V+ + +RSR FGF+TY A+ D AM+
Sbjct: 9 KLFVGGLNVDTDNDGLRKHFEQFGELTDCAVVMNQQLQRSRCFGFVTYKTAEEADAAMAA 68
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESV 136
RPH +DG+ VE KRAV R++ P NA VKK+FVGGLKD ED+ L EYF+QFG ++
Sbjct: 69 RPHVVDGKNVEVKRAVAREDADDPVINAKVKKIFVGGLKDDIEDEHLTEYFTQFGEVQKA 128
Query: 137 NMVTNKETGAKRGFAFIEF 155
+++ KETG KRGF F+ F
Sbjct: 129 EVISEKETGKKRGFGFVHF 147
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GGL DE L +F Q+GE+ V+ + T + RGFGF+ +++ D A
Sbjct: 98 VKKIFVGGLKDDIEDEHLTEYFTQFGEVQKAEVISEKETGKKRGFGFVHFTDDDAADKAA 157
Query: 76 SNRPHNIDGRVVETKRAVPRDE 97
+ H I+G VE K+A+ + E
Sbjct: 158 LLKFHTINGHRVEVKKALTKQE 179
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 105 ATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 155
A + K+FVGGL D + D LR++F QFG + +V N++ R F F+ +
Sbjct: 5 AKICKLFVGGLNVDTDNDGLRKHFEQFGELTDCAVVMNQQLQRSRCFGFVTY 56
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 25 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 84
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ V+ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 85 KVLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 142
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 143 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 176
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 178 IHFHEINNKMVECKKAQPKE 197
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 1 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQN 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ + K+F+GGL E DLR YF++FG + V
Sbjct: 61 GPHQLDGRTIDPKPCNPRT-LQKPKRSGGFPKVFLGGLPSNVTETDLRSYFTRFGKVMEV 119
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D + VD+ V L ++VE
Sbjct: 120 VIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVE 161
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 9/95 (9%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P +L+K VF+GGL T+ L+++F ++G++++VV+M D K+S
Sbjct: 71 DPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSYFTRFGKVMEVVIMYDQEKKKS 130
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRA 92
RGFGF+++ + + VD ++ N++G+ VE KRA
Sbjct: 131 RGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRA 165
>gi|328779378|ref|XP_003249642.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis mellifera]
Length = 212
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 102/149 (68%), Gaps = 4/149 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+RSRGFGFIT++E VD +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG+ ++ K A P++ +AN T KK+FVGG+ +D D+++ YF+QFG +E
Sbjct: 122 PIHTLDGKKIDPKHATPKNR--AKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEET 178
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
M+ +++T RGF F+ F + DVVD++
Sbjct: 179 VMLMDQQTKRHRGFGFVTFENEDVVDRVC 207
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 40/56 (71%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
+K+F+GG+ T+ + ++A+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 149 KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVD 204
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 109 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGGL Q + LREYF FGT+ V ++ + T RGF FI F + VDK++
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 168 KITLLLDRRVE 178
I L ++++
Sbjct: 122 PIHTLDGKKID 132
>gi|393910199|gb|EJD75782.1| hypothetical protein LOAG_17145 [Loa loa]
Length = 355
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 20/185 (10%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+S+C P RK+FIGGL + TTDE L+ ++ QWG +VD +V++DP TK SRGFGF+T++
Sbjct: 47 NSEC--PPQPRKLFIGGLSHETTDEQLRQYYSQWGTVVDCIVIRDPQTKYSRGFGFVTFA 104
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK----------KMFVGGLK 116
+M + AM++RPH I+ +VV+ KRA+PR+++ N K+ + G+
Sbjct: 105 TIQMAEAAMADRPHTINNKVVDPKRAIPREQMSPLLPNHPPSFLEIEPDPGCKLSLSGIH 164
Query: 117 DQEE--DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV-LSKITLLL 173
DDLR+YF FGT+E V ++ G RG F+ F DK + KI ++
Sbjct: 165 WAWHTVDDLRQYFDNFGTVEQVEIL-----GNPRGLGFVVFESKPSADKCLEHGKIHIIN 219
Query: 174 DRRVE 178
++ E
Sbjct: 220 GQKCE 224
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ + K+F+GGL E DLR +F++FG + V
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQ-KPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D D VD+ V L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVE 174
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVF+GGL T+ L++FF ++G++++VV+M D K+SRGFGF+++ + VD ++
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
N++G+ VE KRA PRD K
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSK 186
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 104/177 (58%), Gaps = 13/177 (7%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+ RK+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 5 NCRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 64
Query: 75 MSNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEED 121
+++RPH +DGR ++ K PR + G ++ K+FVGG+ + E
Sbjct: 65 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGET 124
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 125 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 181
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 102 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 155
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 156 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 201
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ + K+F+GGL E DLR +F++FG + V
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQ-KPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D D VD+ V L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVE 174
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVF+GGL T+ L++FF ++G++++VV+M D K+SRGFGF+++ + VD ++
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
N++G+ VE KRA PRD K
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSK 186
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ + K+F+GGL E DLR +F++FG + V
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQ-KPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D D VD+ V L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVE 174
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVF+GGL T+ L++FF ++G++++VV+M D K+SRGFGF+++ + VD ++
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
N++G+ VE KRA PRD K
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSK 186
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ + K+F+GGL E DLR +F++FG + V
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQ-KPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D D VD+ V L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVE 174
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVF+GGL T+ L++FF ++G++++VV+M D K+SRGFGF+++ + VD ++
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
N++G+ VE KRA PRD K
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSK 186
>gi|116197887|ref|XP_001224755.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
gi|88178378|gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
Length = 886
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 66/150 (44%), Positives = 100/150 (66%), Gaps = 8/150 (5%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E+ RK+FIGGL++ TTD+SL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+
Sbjct: 386 ENTRKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDGATGRSRGFGFLTFKDPKTVNI 445
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGT 132
M + H +DG++++ KRA+PRDE K K+FVGG+ + D + REYF+QFG
Sbjct: 446 VMV-KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDHEFREYFAQFGR 498
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
+ ++ +K+TG RGF F+ F VD
Sbjct: 499 VVDATLMMDKDTGRPRGFGFVTFESEAGVD 528
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD + +F Q+G +VD +M D
Sbjct: 448 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMD 507
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANA 105
T R RGFGF+T+ VD ++ P I G+ +E K+A PR + E A
Sbjct: 508 KDTGRPRGFGFVTFESEAGVDACLAT-PLEIHGKPIEVKKAQPRGNLRDEEDAA 560
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 14/179 (7%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P SL K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 2 PCSL-KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVG 60
Query: 73 DAMSNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQE 119
+++RPH +DGR ++ K PR + G N+ K+FVGG+ +
Sbjct: 61 TVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCG 120
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E +LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 121 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 179
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 100 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 153
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 154 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 199
>gi|397484877|ref|XP_003813592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2-like
[Pan paniscus]
Length = 257
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 78/100 (78%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + T DESL++ FEQWG + D +VM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETIDESLRSHFEQWGTLTDCLVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMF 111
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+F
Sbjct: 69 DAAMNTRPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIF 108
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 89 TKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAK 147
+K A P++ PE ++K+F+GGL + D+ LR +F Q+GT+ ++ + T
Sbjct: 2 SKSASPKE----PE---QLRKLFIGGLSFETIDESLRSHFEQWGTLTDCLVMRDPNTKCS 54
Query: 148 RGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
RGF F+ + + VD + ++ + R VE
Sbjct: 55 RGFGFVTYATVEEVDAAMNTRPHKVDGRVVE 85
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLK-DQEEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
DD + +S K+F+GG+ + TT+ES FE++G I D V+MKD TK RGFGF+T+
Sbjct: 168 DDGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 227
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
S+ ++D + + H IDGR VE KR VPR+E+ + T +K+FVGGL ED+LR
Sbjct: 228 SDPSVIDKVLEDE-HVIDGRTVEVKRTVPREEMSSKDGPKT-RKIFVGGLPSSLTEDELR 285
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
E+FS +G I ++ + TG RGF F+ F D V++++
Sbjct: 286 EHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 326
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S P++ RK+F+GGL T++ L+ F +G+IV+ +M D T RSRGFGF
Sbjct: 255 PREEMSSKDGPKT-RKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGF 313
Query: 63 ITYSEAKMVDDAMS-NRPHNIDGRVVETKRAVPRDEIG 99
+T+ V+ +S R ++ G+ VE K+A P+ G
Sbjct: 314 VTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGG 351
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 13/175 (7%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 99 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 158
Query: 77 NRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDDL 123
+RPH +DGR ++ K PR + G ++ K+FVGG+ + E +L
Sbjct: 159 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 218
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 219 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 273
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 194 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 247
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
IT+ + + VD A++ H+I G+ VE KRA PRD + A +
Sbjct: 248 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQAGASQW 295
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ + K+F+GGL E DLR +F +FG + V
Sbjct: 74 GPHQLDGRTIDPKPCNPR-TLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D D VD+ V L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVE 174
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P +L+K VF+GGL T+ L++FF+++G++++VV+M D K+S
Sbjct: 84 DPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEVVIMYDQEKKKS 143
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
RGFGF+++ + VD + N++G+ VE KRA PRD K
Sbjct: 144 RGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEPRDSSSK 186
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
IT+ + + VD A++ H+I G+ VE KRA PRD +P +
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQPPGQPGASQW 206
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ + K+F+GGL E DLR +F +FG + V
Sbjct: 74 GPHQLDGRTIDPKPCNPR-TLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D D VD+ V L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVE 174
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P +L+K VF+GGL T+ L++FF+++G++++VV+M D K+S
Sbjct: 84 DPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEVVIMYDQEKKKS 143
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
RGFGF+++ + VD + N++G+ VE KRA PRD K
Sbjct: 144 RGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEPRDSSSK 186
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 10/105 (9%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFI
Sbjct: 106 RSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFI 159
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
T+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 160 TFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTPPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|440910410|gb|ELR60208.1| DAZ-associated protein 1, partial [Bos grunniens mutus]
Length = 386
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 13/174 (7%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 RPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
RPH +DGR ++ K PR + G N+ K+FVGG+ E +LR
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 120
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 174
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 95 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 148
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 149 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 194
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDD 122
++RPH +DGR ++ K PR + G N+ K+FVGG+ E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT++ L+ +F ++GE+ D V+M+DP+TKR RGFGF+T+++ V++ M N
Sbjct: 13 KIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEEVMKN 72
Query: 78 RPHNIDGRVVET-----KRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFG 131
PH +D + ++ K A P + G N VKK+FVGG+ EDD+R +F QFG
Sbjct: 73 GPHTLDNKTIDPKPATMKSATPPSQGG--SFNGRVKKVFVGGIAAGTTEDDVRSFFGQFG 130
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+ +++ +K T RGF F+ F+ DVVD++ + + VE
Sbjct: 131 PVTEIDLKFDKATQRMRGFGFVGFDSEDVVDRLCQIHFHQINGKTVE 177
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++KVF+GG+ TT++ +++FF Q+G + ++ + D T+R RGFGF+ + +VD
Sbjct: 105 VKKVFVGGIAAGTTEDDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVVDRLC 164
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEA 103
H I+G+ VE K+A PR P++
Sbjct: 165 QIHFHQINGKTVEVKKAEPRFSATGPQS 192
>gi|194382016|dbj|BAG64377.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 76/96 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATV 107
D AM+ RPH +DGRVVE KRAV R++ +P A+ TV
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVDGRVVE 85
>gi|55742017|ref|NP_001006737.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
gi|49522454|gb|AAH75497.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 103/177 (58%), Gaps = 14/177 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPR-------------DEIGKPEANATVKKMFVGGL-KDQEED 121
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGET 128
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 ELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 185
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
TE K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + +
Sbjct: 108 TENSRSNKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 167
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
VD A++ H+I G+ VE KRA PRD G P +N
Sbjct: 168 VDQAVNMHFHDIMGKKVEVKRAEPRDSKSQTPGPPGSN 205
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 102/174 (58%), Gaps = 13/174 (7%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 40 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 99
Query: 78 RPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDDLR 124
RPH +DGR ++ K PR + G N+ K+FVGG+ + E +LR
Sbjct: 100 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRNDNSKSNKIFVGGIPHNCGETELR 159
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 160 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 213
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 134 PRNDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 187
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 188 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQVPGQPGAS 233
>gi|119589908|gb|EAW69502.1| DAZ associated protein 1, isoform CRA_b [Homo sapiens]
Length = 405
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPR---DEIGKPEA--------NATVKKMFVGGL-KDQEEDDL 123
++RPH +DGR ++ K PR E +P+ N+ K+FVGG+ + E +L
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDNSKSNKIFVGGIPHNCGETEL 128
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 183
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 104 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 158 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 203
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T ESLQ +F ++GE++D VVMK+ + RSRGFGF+T+++ V+ + N
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ +++ K+F+GGL E DLR +FS++G + V
Sbjct: 74 GPHVLDGRTIDPKPCNPR-TLQKPKRSSSYPKVFLGGLPSNVTETDLRTFFSRYGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D D VD+ V L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVE 174
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
S KVF+GGL T+ L+ FF ++G++++VV+M D K+SRGFGF+++ + VD
Sbjct: 100 SSYPKVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDR 159
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
++ N+ G+ VE K+A PRD
Sbjct: 160 CVAEHFVNLSGKQVEIKKAEPRDS 183
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 108/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G++ D+ +M+D T RSRGFGF+T++EA VD+ +
Sbjct: 209 KMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTFAEASSVDEVVKT 268
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + E+FSQ+GTI
Sbjct: 269 Q-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 321
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VD++ +K +R+E
Sbjct: 322 QLMLDKDTGRSRGFGFITYDTPDAVDRVCENKFIEFKGKRIE 363
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T RSRGFGFITY VD N
Sbjct: 293 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDRVCEN 352
Query: 78 RPHNIDGRVVETKRAVPR 95
+ G+ +E KRA PR
Sbjct: 353 KFIEFKGKRIEIKRAEPR 370
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 107 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+ KMF+GGL + ED+L++YFS++G + + ++ + TG RGF F+ F + VD++V
Sbjct: 207 ICKMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTFAEASSVDEVV 266
Query: 166 LSKITLLLDRRV 177
K +LD +V
Sbjct: 267 --KTQHILDGKV 276
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 14/180 (7%)
Query: 13 PESLR-KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P S+ K+F+GGLD+ TT E+L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 39 PSSISGKLFVGGLDWSTTQETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 98
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQ 118
+++RPH +DGR ++ K PR + G N+ K+FVGG+ +
Sbjct: 99 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 158
Query: 119 EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E +LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 159 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 218
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 139 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 192
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 193 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 238
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T ESLQ +F ++GE++D VVMK+ + RSRGFGF+T+++ V+ + N
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ +++ K+F+GGL E DLR +FS++G + V
Sbjct: 74 GPHVLDGRTIDPKPCNPR-TLQKPKRSSSYPKVFLGGLPSNVTETDLRTFFSRYGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D D VD+ V L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVE 174
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
S KVF+GGL T+ L+ FF ++G++++VV+M D K+SRGFGF+++ + VD
Sbjct: 100 SSYPKVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDR 159
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
++ N+ G+ VE K+A PRD
Sbjct: 160 CVAEHFVNLSGKQVEIKKAEPRDS 183
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 13/174 (7%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 RPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
RPH +DGR ++ K PR + G N+ K+FVGG+ E +LR
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 120
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 174
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 95 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 148
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 149 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 194
>gi|89271354|emb|CAJ83458.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 347
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 103/177 (58%), Gaps = 14/177 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPR-------------DEIGKPEANATVKKMFVGGL-KDQEED 121
++RPH +DGR ++ K PR + G N+ K+FVGG+ + E
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGET 128
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 ELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 185
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR ++S+ K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 106 PRTENSRSN------KIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGF 159
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G P +N
Sbjct: 160 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQTPGPPGSN 205
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
DD + +S K+F+GG+ + TT+ES FE++G I D V+MKD TK RGFGF+T+
Sbjct: 55 DDGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 114
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
S+ ++D + + H IDGR VE KR VPR+E+ + T +K+FVGGL ED+LR
Sbjct: 115 SDPSVIDKVLEDE-HVIDGRTVEVKRTVPREEMSSKDGPKT-RKIFVGGLPSSLTEDELR 172
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
E+FS +G I ++ + TG RGF F+ F D V++++
Sbjct: 173 EHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 213
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S P++ RK+F+GGL T++ L+ F +G+IV+ +M D T RSRGFGF
Sbjct: 142 PREEMSSKDGPKT-RKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGF 200
Query: 63 ITYSEAKMVDDAMS-NRPHNIDGRVVETKRAVPRDEIG 99
+T+ V+ +S R ++ G+ VE K+A P+ G
Sbjct: 201 VTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGG 238
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + T +ESL +F+++G ++D VVM+D +T+RSRGFGF+T+++ K V D +S+
Sbjct: 1 KLFVGGISWNTNEESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSS 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH + R ++ KRA+PR A+ T+KK+F+GGL ED ++ YF QFG IE
Sbjct: 61 GPHVVCDREIDPKRAIPRSS--SDPASTTIKKLFLGGLASSMNEDSIKNYFVQFGEIEDA 118
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRV 177
+++TG RGF FI F + + ++ + + RV
Sbjct: 119 LCQRDRDTGRPRGFGFITFKTEEAAESVLRQQYHTIDGNRV 159
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GGL ++S++ +F Q+GEI D + +D T R RGFGFIT+ + +
Sbjct: 87 TIKKLFLGGLASSMNEDSIKNYFVQFGEIEDALCQRDRDTGRPRGFGFITFKTEEAAESV 146
Query: 75 MSNRPHNIDGRVV 87
+ + H IDG V
Sbjct: 147 LRQQYHTIDGNRV 159
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+ + E+ L +YF ++GT+ ++ + T RGF F+ F D V ++ S
Sbjct: 1 KLFVGGISWNTNEESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSS 60
Query: 168 KITLLLDRRVE 178
++ DR ++
Sbjct: 61 GPHVVCDREID 71
>gi|345323573|ref|XP_001508014.2| PREDICTED: DAZ-associated protein 1-like [Ornithorhynchus anatinus]
Length = 445
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 101/174 (58%), Gaps = 13/174 (7%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE++D V+MKD T +SRGFGF+ + + V +++
Sbjct: 50 KLFVGGLDWSTTQETLRSYFSQYGEVIDCVIMKDKTTNQSRGFGFVKFKDPNCVGAVLAS 109
Query: 78 RPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDDLR 124
RPH +DGR ++ K PR + G N K+FVGG+ + E +LR
Sbjct: 110 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELR 169
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 170 EYFKKFGVVSEVVMIYDAEKQRPRGFGFITFEDQQSVDQAVNMHFHDIMGKKVE 223
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D++K K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 144 PRSDNNKSN------KIFVGGIPHNCGETELREYFKKFGVVSEVVMIYDAEKQRPRGFGF 197
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
IT+ + + VD A++ H+I G+ VE KRA PRD +P+ +
Sbjct: 198 ITFEDQQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQPQGQPGTNQW 245
>gi|189241702|ref|XP_966757.2| PREDICTED: similar to hrp48.1 [Tribolium castaneum]
Length = 400
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT ++LQ FF ++GE++D VVMK+ + RSRGFGF+T+S+ V+ + N
Sbjct: 16 KLFVGGLSWETTQDNLQRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSDPANVNTVLQN 75
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ K+F+GGL E DLR +F++FG + V
Sbjct: 76 GPHTLDGRTIDPKPCNPR-TLQKPKKGGGYPKVFLGGLPSNVTETDLRTFFTRFGKVMEV 134
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D + VD+ V L ++VE
Sbjct: 135 VIMYDQEKKKSRGFGFLSFEDEESVDRCVSEHFVNLNGKQVE 176
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P +L+K VF+GGL T+ L+ FF ++G++++VV+M D K+S
Sbjct: 86 DPKPCNPRTLQKPKKGGGYPKVFLGGLPSNVTETDLRTFFTRFGKVMEVVIMYDQEKKKS 145
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIG 99
RGFGF+++ + + VD +S N++G+ VE K+A PRD G
Sbjct: 146 RGFGFLSFEDEESVDRCVSEHFVNLNGKQVEIKKAEPRDGSG 187
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
DD + +S K+F+GG+ + TT+ES FE++G I D V+MKD TK RGFGF+T+
Sbjct: 55 DDGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 114
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
S+ ++D + + H IDGR VE KR VPR+E+ + T +K+FVGGL ED+LR
Sbjct: 115 SDPSVIDKVLEDE-HVIDGRTVEVKRTVPREEMSSKDGPKT-RKIFVGGLPSSLTEDELR 172
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
E+FS +G I ++ + TG RGF F+ F D V++++
Sbjct: 173 EHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 213
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S P++ RK+F+GGL T++ L+ F +G+IV+ +M D T RSRGFGF
Sbjct: 142 PREEMSSKDGPKT-RKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGF 200
Query: 63 ITYSEAKMVDDAMS-NRPHNIDGRVVETKRAVPRDEIG 99
+T+ V+ +S R ++ G+ VE K+A P+ G
Sbjct: 201 VTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGG 238
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ + K+F+GGL E DLR +F+++G + V
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQ-KPKRSGGFPKVFLGGLPSNVTETDLRTFFNRYGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D D VD+ V L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVE 174
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVF+GGL T+ L+ FF ++G++++VV+M D K+SRGFGF+++ + VD ++
Sbjct: 104 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 78 RPHNIDGRVVETKRAVPRDEIGK 100
N++G+ VE KRA PRD K
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSK 186
>gi|71894833|ref|NP_001026599.1| DAZ-associated protein 1 [Gallus gallus]
gi|53127644|emb|CAG31151.1| hypothetical protein RCJMB04_2n4 [Gallus gallus]
Length = 409
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 101/176 (57%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 10 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 69
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDD 122
++RPH +DGR ++ K PR + G N K+FVGG+ E +
Sbjct: 70 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETE 129
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 130 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 185
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD A++
Sbjct: 115 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 174
Query: 78 RPHNIDGRVVETKRAVPRD 96
H+I G+ VE KRA PRD
Sbjct: 175 HFHDIMGKKVEVKRAEPRD 193
>gi|353230165|emb|CCD76336.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 346
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL TT E L+ +F+++GE+ + ++M+DP+TKRSRGFGFIT+S+ V+ +
Sbjct: 79 KMFIGGLSPTTTSEGLRDYFQKYGELREYMIMRDPLTKRSRGFGFITFSDPVCVEKVLET 138
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +D + ++ K AVPR + + K++F+GG+ Q ++L EYFSQFG +ES
Sbjct: 139 APHILDYKKIDPKLAVPRKSGQNTKVSTKTKRVFIGGVATQTTNEELSEYFSQFGKLESC 198
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + +K+ L ++ VE
Sbjct: 199 ELMMDKSTNRHRGFGFVTFESEESAEKVCEIHFHDLHNKMVE 240
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
++VFIGG+ +TT+E L +F Q+G++ +M D T R RGFGF+T+ + +
Sbjct: 169 KRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCE 228
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H++ ++VE K+AVP++
Sbjct: 229 IHFHDLHNKMVEAKKAVPKE 248
>gi|224087811|ref|XP_002194831.1| PREDICTED: DAZ-associated protein 1 [Taeniopygia guttata]
Length = 410
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 100/176 (56%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 11 FEKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 70
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDD 122
++RPH +DGR ++ K PR + G N K+FVGG+ E +
Sbjct: 71 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETE 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 131 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 186
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD A++
Sbjct: 116 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 175
Query: 78 RPHNIDGRVVETKRAVPRD 96
H+I G+ VE KRA PRD
Sbjct: 176 HFHDIMGKKVEVKRAEPRD 194
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 101/155 (65%), Gaps = 8/155 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTDESL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K+V+ M +
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K+FVGG+ ++ +DD +F +FG +
Sbjct: 60 EHTLDGKLIDPKRAIPRDE------QERTAKIFVGGVSQEASQDDFANFFRRFGNVLDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +KETG RGF F+ F+ VD+ + S + +
Sbjct: 114 LMMDKETGRPRGFGFVTFDSEAAVDRTLESPLAIC 148
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ + + FF ++G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQERTAKIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKETGRPRGFGFVTFDSEAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
D + + P I G+ +E KRA PR ++
Sbjct: 138 DRTLES-PLAICGKNIEVKRAQPRGDM 163
>gi|159163803|pdb|2CJK|A Chain A, Structure Of The Rna Binding Domain Of Hrp1 In Complex
With Rna
gi|301598362|pdb|2KM8|C Chain C, Interdomain Rrm Packing Contributes To Rna Recognition In
The Rna15, Hrp1, Anchor Rna 3' Processing Ternary
Complex
Length = 167
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 5 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 64
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 65 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 117
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 118 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 159
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A V
Sbjct: 83 EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV 142
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
D N+ + R +E KRA PR
Sbjct: 143 DRVCQNKFIDFKDRKIEIKRAEPR 166
>gi|322711386|gb|EFZ02959.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium
anisopliae ARSEF 23]
Length = 517
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 101/151 (66%), Gaps = 8/151 (5%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGGL++ TTD+SL+ +FEQ+GE+V+ VM+D T RSRGFGF+T+ +AK V+ M
Sbjct: 111 LLKMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVM 170
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIE 134
+ H +DG++++ KRA+PRDE K K+FVGG+ + D + R+YF+QFG +
Sbjct: 171 V-KEHFLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDQEFRDYFAQFGRVV 223
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K+TG RGF F+ F V+ +
Sbjct: 224 DATLMMDKDTGRPRGFGFVTFESEAGVEACI 254
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY-SEAKM 70
E E K+F+GG+ TTD+ + +F Q+G +VD +M D T R RGFGF+T+ SEA +
Sbjct: 191 EQEKTSKIFVGGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 250
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKK 109
+A N P I G+ VE KRA PR + + E A K
Sbjct: 251 --EACINVPLEIHGKPVEVKRAQPRGNLREEEEAAKRSK 287
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + D LREYF QFG + ++ + TG RGF F+ F D V+ IV+
Sbjct: 113 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVN-IVMV 171
Query: 168 KITLL 172
K L
Sbjct: 172 KEHFL 176
>gi|195999482|ref|XP_002109609.1| hypothetical protein TRIADDRAFT_20799 [Trichoplax adhaerens]
gi|190587733|gb|EDV27775.1| hypothetical protein TRIADDRAFT_20799 [Trichoplax adhaerens]
Length = 154
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 103/154 (66%), Gaps = 4/154 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TTDE+L+ +F ++G+I D VV+ + +++ RGFGF+TY + V + ++
Sbjct: 2 KIFIGGLSFDTTDETLRNYFAKYGDIADSVVICESGSRKPRGFGFVTYKDVTSVKNCLAG 61
Query: 78 RPHNIDGRVVETKRAVPR--DEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIE 134
PH IDG+ VE K AVPR +E+ P + KK+F+GGL E ++R+YF+QFG I
Sbjct: 62 IPHQIDGKTVEVKHAVPRESNELAAPHERRS-KKIFIGGLGASTTETEIRQYFNQFGKIL 120
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
++++ +++T RGF F+ F D VDK++ ++
Sbjct: 121 NIDLKKDRDTNVLRGFGFVVFEAEDSVDKVLTAR 154
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+FIGGL TT+ ++ +F Q+G+I+++ + KD T RGFGF+ + VD ++
Sbjct: 93 KKIFIGGLGASTTETEIRQYFNQFGKILNIDLKKDRDTNVLRGFGFVVFEAEDSVDKVLT 152
Query: 77 NR 78
R
Sbjct: 153 AR 154
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+ES++ +F Q+G+++D+ +MKD T RSRGFGF+T++ + VD+ +
Sbjct: 107 KMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDEVL-K 165
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+P++E K K+FVGG+ + E + EYF QFG I
Sbjct: 166 KTHVLDGKLIDPKRAIPKEEQDK------TGKIFVGGVAPEVTEAEFTEYFQQFGNIIDS 219
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RG+ F+ ++ D VD++ +K L + +E
Sbjct: 220 QLMLDKDTGRSRGYGFVTYDSPDAVDRVTQNKYVLFHGKNME 261
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ T+ +F+Q+G I+D +M D T RSRG+GF+TY VD N
Sbjct: 191 KIFVGGVAPEVTEAEFTEYFQQFGNIIDSQLMLDKDTGRSRGYGFVTYDSPDAVDRVTQN 250
Query: 78 RPHNIDGRVVETKRAVPRDE---------IGKPEANAT 106
+ G+ +E KRA PR++ IG+P+ T
Sbjct: 251 KYVLFHGKNMEIKRAEPRNQQKAGSSYSNIGQPQQTYT 288
>gi|148223810|ref|NP_001082088.1| DAZ-associated protein 1 [Xenopus laevis]
gi|44887870|sp|Q98SJ2.1|DAZP1_XENLA RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1; AltName:
Full=Proline-rich Vg1 mRNA-binding protein
gi|13488613|gb|AAK26172.1| proline-rich Vg1 mRNA-binding protein [Xenopus laevis]
Length = 360
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 14/177 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD---EIGKPE----------ANATVKKMFVGGL-KDQEED 121
++RPH +DGR ++ K PR E +P N+ K+FVGG+ + E
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGET 128
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+L+EYF++FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 ELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 185
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 10/107 (9%)
Query: 2 KPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
+PR ++S+ K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFG
Sbjct: 105 EPRTENSRSN------KIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFG 158
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
FIT+ + + VD A++ H+I G+ VE KRA PRD G P +N
Sbjct: 159 FITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQTPGPPGSN 205
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 104/156 (66%), Gaps = 8/156 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTDESL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 102 KMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMV- 160
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K+FVGG+ +D E D +E+F +FG +
Sbjct: 161 KEHQLDGKLIDPKRAIPRDE------QERTAKIFVGGVSQDATESDFKEFFMKFGRVLDA 214
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +K+TG RGF F+ F++ V++ + +++L
Sbjct: 215 TLMMDKDTGRPRGFGFVTFDNDLAVERTLEGPLSIL 250
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T+ + FF ++G ++D +M D T R RGFGF+T+ V
Sbjct: 180 EQERTAKIFVGGVSQDATESDFKEFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDNDLAV 239
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPE 102
+ + P +I G+ +E KRA PR ++G+ E
Sbjct: 240 ERTLEG-PLSILGKPIEVKRAQPRGKMGEDE 269
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 14/177 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD---EIGKPE----------ANATVKKMFVGGL-KDQEED 121
++RPH +DGR ++ K PR E +P N+ K+FVGG+ + E
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGET 128
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+L+EYF++FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 ELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 185
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 10/107 (9%)
Query: 2 KPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
+PR ++S+ K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFG
Sbjct: 105 EPRTENSRSN------KIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFG 158
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
FIT+ + + VD A++ H+I G+ VE KRA PRD G P +N
Sbjct: 159 FITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQTPGPPGSN 205
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+RK+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 9 IRKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVM 68
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIE 134
H +DG++++ KRA+PRDE K K+FVGG+ ++ E + +E+F+QFG +
Sbjct: 69 VKE-HYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQEFKEFFTQFGRVI 121
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ + + +E
Sbjct: 122 DATLMIDKDTGRPRGFGFVTF-DSEAAVEAALSRPLAICGKPIE 164
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + FF Q+G ++D +M D
Sbjct: 69 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMID 128
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ A+S RP I G+ +E K+A PR +
Sbjct: 129 KDTGRPRGFGFVTFDSEAAVEAALS-RPLAICGKPIEVKKAQPRGNL 174
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR + G ++ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR + G ++ K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGAS 204
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 1 MGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 60
Query: 76 SNRPHNIDGRVVETKRAVPR---DEIGKPEA--------NATVKKMFVGGL-KDQEEDDL 123
++RPH +DGR ++ K PR E +P+ ++ K+FVGG+ + E +L
Sbjct: 61 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETEL 120
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 121 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 175
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 96 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 149
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 150 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGAS 195
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT++ L+ +F ++G++ ++ +MKDP T RSRGFGF+T+ A VD+ +
Sbjct: 123 KMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFESASSVDEVVKT 182
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + E+F+Q+GTI
Sbjct: 183 Q-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGPDVRPKEFEEFFAQWGTIIDA 235
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VDK+ +K R++E
Sbjct: 236 QLMLDKDTGRSRGFGFITYDTPDAVDKVCQNKFIDFKGRKIE 277
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T RSRGFGFITY VD N
Sbjct: 207 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDKVCQN 266
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + GR +E KRA PR
Sbjct: 267 KFIDFKGRKIEIKRAAPR 284
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL + TT E+LQ +F ++G++VD VVMK+ + RSRGFGF+T+++ V +
Sbjct: 18 LIKLFVGGLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVL 77
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIE 134
N PH +DGR ++ K PR + KP+ N K+F+GGL E DLR++F ++G +
Sbjct: 78 QNGPHVLDGRTIDPKPCNPR-TLSKPKRNNGYPKVFLGGLPSNVTETDLRQFFMRYGKVM 136
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
V ++ ++E RGF F+ F D D V++ V L ++VE
Sbjct: 137 EVVIMYDQEKKKSRGFGFLSFEDEDAVERCVADHFVNLHGKQVE 180
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 9/103 (8%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P +L K VF+GGL T+ L+ FF ++G++++VV+M D K+S
Sbjct: 90 DPKPCNPRTLSKPKRNNGYPKVFLGGLPSNVTETDLRQFFMRYGKVMEVVIMYDQEKKKS 149
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
RGFGF+++ + V+ +++ N+ G+ VE K+A PRD GK
Sbjct: 150 RGFGFLSFEDEDAVERCVADHFVNLHGKQVEIKKAEPRDASGK 192
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPR---DEIGKPEA--------NATVKKMFVGGL-KDQEEDDL 123
++RPH +DGR ++ K PR E +P+ ++ K+FVGG+ + E +L
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETEL 128
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 183
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 104 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 158 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGAS 203
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPR---DEIGKPEA--------NATVKKMFVGGL-KDQEEDDL 123
++RPH +DGR ++ K PR E +P+ ++ K+FVGG+ + E +L
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETEL 128
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 183
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 104 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 158 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGAS 203
>gi|74214542|dbj|BAE31119.1| unnamed protein product [Mus musculus]
gi|74214594|dbj|BAE31140.1| unnamed protein product [Mus musculus]
Length = 405
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPR---DEIGKPEA--------NATVKKMFVGGL-KDQEEDDL 123
++RPH +DGR ++ K PR E +P+ ++ K+FVGG+ + E +L
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPEQTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETEL 128
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFRDIMGKKVE 183
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 104 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ +I G+ VE KRA PRD G+P A+
Sbjct: 158 ITFEDEQSVDQAVNMHFRDIMGKKVEVKRAEPRDSKNQAPGQPGAS 203
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 13/174 (7%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 31 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 90
Query: 78 RPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
RPH +DGR ++ K PR + G N K+FVGG+ E +LR
Sbjct: 91 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELR 150
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 151 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 204
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD A++
Sbjct: 134 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 193
Query: 78 RPHNIDGRVVETKRAVPRD 96
H+I G+ VE KRA PRD
Sbjct: 194 HFHDIMGKKVEVKRAEPRD 212
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 100/155 (64%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+TY+E V
Sbjct: 17 SPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+ ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 77 EKVLAQNRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQF 134
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 135 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 169
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 171 IHFHEINNKMVECKKAQPK-EVMTPTGSA 198
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPR---DEIGKPEA--------NATVKKMFVGGL-KDQEEDDL 123
++RPH +DGR ++ K PR E +P+ ++ K+FVGG+ + E +L
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETEL 128
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
REYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 183
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 104 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 158 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGAS 203
>gi|508270|gb|AAA64654.1| A+U-rich RNA-binding protein [Mus musculus]
Length = 269
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 104/167 (62%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 53 PRHTEAAAAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 111
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 112 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 165
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + +K+T +RGF FI F + + V KI+ K
Sbjct: 166 KIREYFGGFGEVESIELPMDKKTNKRRGFCFITFKEEEPVKKIMEKK 212
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 148 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKKTNKRRGFCFITFKEEEPVKK 207
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 208 IMEKKYHNVGLSKCEIKVAMSKE 230
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 100/149 (67%), Gaps = 8/149 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ +AK V+ M
Sbjct: 120 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMV- 178
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ + D + +EYF+QFG +
Sbjct: 179 KEHFLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDQEFKEYFAQFGRVVDA 232
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K+TG RGF F+ F + VD +
Sbjct: 233 TLMMDKDTGRPRGFGFVTFENEAGVDACI 261
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ TTD+ + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 198 EQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGV 257
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
DA N P I G+ +E K+A PR +
Sbjct: 258 -DACINVPLEIHGKPIEVKKAQPRGNL 283
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + D LR+YFSQFG + ++ + TG RGF F+ F D V+ IV+
Sbjct: 120 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVN-IVMV 178
Query: 168 KITLL 172
K L
Sbjct: 179 KEHFL 183
>gi|291243919|ref|XP_002741849.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Saccoglossus kowalevskii]
Length = 415
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 110/183 (60%), Gaps = 16/183 (8%)
Query: 6 DDSKCTEPESLR---------KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKR 56
DD +C E + K+F+GGL + TT + L+ +F+++G +VD + DP+T R
Sbjct: 63 DDYECAPGERINASKNQDDDGKLFVGGLSWETTQKDLKEYFKKFGPVVDCTIKIDPVTGR 122
Query: 57 SRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK 116
SRGFGF+ +++ V+ + + H +DGR+++ KRA R G+P + K+FVGGL
Sbjct: 123 SRGFGFVLFADGASVEKVLQPQEHKLDGRIIDPKRAKARG--GQP----PITKIFVGGLN 176
Query: 117 DQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDR 175
+ E++LR+YF++FG I+ V + ++ T +RGF FIEF D V++I + LL +
Sbjct: 177 PEYPENELRDYFTKFGAIKEVELPIDRATNKRRGFCFIEFEKEDSVEEICKQQFHLLGNN 236
Query: 176 RVE 178
+ E
Sbjct: 237 KCE 239
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGL+ + L+ +F ++G I +V + D T + RGF FI + + V++
Sbjct: 167 ITKIFVGGLNPEYPENELRDYFTKFGAIKEVELPIDRATNKRRGFCFIEFEKEDSVEEIC 226
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATV 107
+ H + E K+A P+D+ K A V
Sbjct: 227 KQQFHLLGNNKCEVKKATPKDQNTKQAVTAAV 258
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S K+F+GG+ + TT+ES F ++G I D V+MKD TK RGFGF+T+S+ ++D
Sbjct: 60 SSGKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 119
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTI 133
+ + HNIDGR VE KR VPR+E+ + T +K+FVGGL EDDLR++FS +G +
Sbjct: 120 LEDE-HNIDGRTVEVKRTVPREEMSSKDGPKT-RKIFVGGLPSTLTEDDLRDHFSSYGNV 177
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ + TG RGF F+ F D V++++
Sbjct: 178 VEHQIMVDHSTGRSRGFGFVTFESEDSVERVI 209
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S P++ RK+F+GGL T++ L+ F +G +V+ +M D T RSRGFGF
Sbjct: 138 PREEMSSKDGPKT-RKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGF 196
Query: 63 ITYSEAKMVDDAMS-NRPHNIDGRVVETKRAVPRDEIG 99
+T+ V+ +S R ++ G+ VE K+A P+ G
Sbjct: 197 VTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGG 234
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S K+F+GG+ + TT+ES F ++G I D V+MKD TK RGFGF+T+S+ ++D
Sbjct: 60 SSGKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 119
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTI 133
+ + HNIDGR VE KR VPR+E+ + T +K+FVGGL EDDLR++FS +G +
Sbjct: 120 LEDE-HNIDGRTVEVKRTVPREEMSSKDGPKT-RKIFVGGLPSTLTEDDLRDHFSSYGNV 177
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ + TG RGF F+ F D V++++
Sbjct: 178 VEHQIMVDHSTGRSRGFGFVTFESEDSVERVI 209
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S P++ RK+F+GGL T++ L+ F +G +V+ +M D T RSRGFGF
Sbjct: 138 PREEMSSKDGPKT-RKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGF 196
Query: 63 ITYSEAKMVDDAMS-NRPHNIDGRVVETKRAVPRDEIG 99
+T+ V+ +S R ++ G+ VE K+A P+ G
Sbjct: 197 VTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGG 234
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 105/161 (65%), Gaps = 9/161 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTDESL+ +F Q+GE+ + VM+D T RSRGFGF+T+ +AK V+ M
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +++F QFG +
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQDFKQFFMQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F+ V+K LS+ +L + +E
Sbjct: 114 LMMDKDTGRPRGFGFVTFDGDAAVEK-ALSRPLEILGKPIE 153
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T++ + FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD 122
+ A+S RP I G+ +E K+A PR + E N GG +DQ ++D
Sbjct: 138 EKALS-RPLEILGKPIEVKKAQPRGNLR--ENNDQRGGHRAGGYRDQSQND 185
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ T RSRGFGF+T+++ VD A+ N
Sbjct: 19 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALEN 78
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ K+F+GGL E DLR +FS++G + V
Sbjct: 79 GPHTLDGRTIDPKPCNPRS-LHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEV 137
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F + V++ + ++VE
Sbjct: 138 VIMYDQEKKKSRGFGFLSFENEPAVERATAEHFVNISGKQVE 179
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P SL K VF+GGL T+ L++FF ++G +++VV+M D K+S
Sbjct: 89 DPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKS 148
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
RGFGF+++ V+ A + NI G+ VE K+A PRD G
Sbjct: 149 RGFGFLSFENEPAVERATAEHFVNISGKQVEIKKAEPRDGSGN 191
>gi|50548677|ref|XP_501808.1| YALI0C13860p [Yarrowia lipolytica]
gi|49647675|emb|CAG82118.1| YALI0C13860p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 107/161 (66%), Gaps = 8/161 (4%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTDESL +F Q+GE+++ VM+D + +SRGFGF+T+ + K V+ M+ +
Sbjct: 1 MFIGGLNWETTDESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDPKCVNAVMA-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PR+E K K+FVGG+ D E+D +++F Q+GT+
Sbjct: 60 EHYLDGKIIDPKRAIPREEQDK------TSKIFVGGVGSDVTEEDYKQFFEQYGTVIDAQ 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K++G RGF F+ F+ ++ I+ + +L D+ +E
Sbjct: 114 LMIDKDSGRPRGFGFVTFDSEQAMNTILAQPLLILKDKPIE 154
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + K+F+GG+ T+E + FFEQ+G ++D +M D + R RGFGF+T+ + +
Sbjct: 78 EQDKTSKIFVGGVGSDVTEEDYKQFFEQYGTVIDAQLMIDKDSGRPRGFGFVTFDSEQAM 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
+ ++ + + +E KRA R
Sbjct: 138 NTILAQPLLILKDKPIEVKRAENR 161
>gi|405977312|gb|EKC41770.1| Heterogeneous nuclear ribonucleoprotein 27C [Crassostrea gigas]
Length = 569
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 65/177 (36%), Positives = 102/177 (57%), Gaps = 15/177 (8%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+FIGGL + T +SL FF Q+GE++D VVMK+ T +SRGFGF+T+++A+ VD +S
Sbjct: 41 KKLFIGGLSWDTDQDSLLNFFSQYGEVIDCVVMKNQQTGKSRGFGFVTFNDAQCVDTVLS 100
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATV---------------KKMFVGGLKDQEED 121
PH IDGR V+ K P+ P+ KK+F+GGL + +ED
Sbjct: 101 AAPHTIDGRQVDAKPCNPKAANKGPKDGGGRIHGGGGGGGGGGDKDKKIFMGGLPNVDED 160
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LR +F ++G + VN++ +++ RGF F+ F D VD++ + ++VE
Sbjct: 161 FLRNFFGKYGKVLDVNIMIDQQNKKSRGFGFLTFESEDAVDQVCAEHFININGKQVE 217
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL ++ L+ FF ++G+++DV +M D K+SRGFGF+T+ VD +
Sbjct: 147 KKIFMGGLP-NVDEDFLRNFFGKYGKVLDVNIMIDQQNKKSRGFGFLTFESEDAVDQVCA 205
Query: 77 NRPHNIDGRVVETKRAVPRD 96
NI+G+ VE KRA PRD
Sbjct: 206 EHFININGKQVECKRAEPRD 225
>gi|398396946|ref|XP_003851931.1| hypothetical protein MYCGRDRAFT_28846, partial [Zymoseptoria
tritici IPO323]
gi|339471811|gb|EGP86907.1| hypothetical protein MYCGRDRAFT_28846 [Zymoseptoria tritici IPO323]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 104/156 (66%), Gaps = 8/156 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D + RSRGFGF+T+ + K V+ M
Sbjct: 1 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKTVNTVMV- 59
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H++DG++++ KRA+PRDE K+FVGG+ ++ E D +E+F QFG +
Sbjct: 60 KEHSLDGKLIDPKRAIPRDE------QERTAKIFVGGVSQEATEQDFKEFFMQFGRVLDA 113
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +K+TG RGF F+ F+D V++ + + +L
Sbjct: 114 TLMMDKDTGRPRGFGFVTFDDEKAVERTLEGPLAIL 149
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T++ + FF Q+G ++D +M D T R RGFGF+T+ + K V
Sbjct: 79 EQERTAKIFVGGVSQEATEQDFKEFFMQFGRVLDATLMMDKDTGRPRGFGFVTFDDEKAV 138
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
+ + P I G+ +E KRA PR
Sbjct: 139 ERTLEG-PLAILGKGIEVKRAQPR 161
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 102/155 (65%), Gaps = 8/155 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 123 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV- 181
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ + D + REYF+QFG +
Sbjct: 182 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDHEFREYFAQFGRVVDA 235
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F V+ + +K+ +
Sbjct: 236 TLMMDKDTGRPRGFGFVTFESEAGVEACLAAKLEI 270
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ TTD + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 201 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 260
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ ++ + I G+ +E K+A PR +
Sbjct: 261 EACLAAK-LEIHGKPIEVKKAQPRGNL 286
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 100/155 (64%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+TY+E V
Sbjct: 17 SPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+ ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 77 EKVLAQNRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQF 134
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 135 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 169
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 171 IHFHEINNKMVECKKAQPK-EVMTPTGSA 198
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 101/167 (60%), Gaps = 7/167 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+ + T+++ L+ +F +G++VDVV+MKD T R+RGFGF+ + + + D +
Sbjct: 7 KIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADRVIQE 66
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPE-----ANATVKKMFVGGLKDQ-EEDDLREYFSQFG 131
+ H IDGR VE KR VPRDE + A KK+FVGGL EDD R+YF QFG
Sbjct: 67 K-HTIDGRAVEAKRVVPRDEQQNVQRTSNMAGPRTKKIFVGGLAPTVTEDDFRKYFEQFG 125
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
I V ++ + T RGF FI ++ D VDK++ L ++ VE
Sbjct: 126 NITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQQTFHQLKEKTVE 172
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T++ + +FEQ+G I DVVVM D T+R RGFGFITY VD +
Sbjct: 101 KKIFVGGLAPTVTEDDFRKYFEQFGNITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQ 160
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H + + VE KRA+P+D
Sbjct: 161 QTFHQLKEKTVEVKRAIPKD 180
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 13/176 (7%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 9 IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68
Query: 76 SNRPHNIDGRVVETKRAVPR---DEIGKPEAN---------ATVKKMFVGGL-KDQEEDD 122
++RPH +DGR ++ K PR E +P+ + K+FVGG+ + E +
Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDYSKSNKIFVGGIPHNCGETE 128
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDYSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 204
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 100/149 (67%), Gaps = 8/149 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +FEQ+GE+V+ VM+D T RSRGFGF+T+ +AK V+ M
Sbjct: 109 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMV- 167
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ + D + R+YF+QFG +
Sbjct: 168 KEHFLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDQEFRDYFAQFGRVVDA 221
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K+TG RGF F+ F V+ +
Sbjct: 222 TLMMDKDTGRPRGFGFVTFESEAGVEACI 250
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY-SEAKM 70
E E K+F+GG+ TTD+ + +F Q+G +VD +M D T R RGFGF+T+ SEA +
Sbjct: 187 EQEKTSKIFVGGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 246
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+A N P I G+ VE KRA PR +
Sbjct: 247 --EACINVPLEIHGKPVEVKRAQPRGNL 272
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + D LREYF QFG + ++ + TG RGF F+ F D V+ IV+
Sbjct: 109 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVN-IVMV 167
Query: 168 KITLL 172
K L
Sbjct: 168 KEHFL 172
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+TY+E V
Sbjct: 17 SPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+ ++ H +D + ++ K A PR +P+ KK+FVGGL + +D++ YF QF
Sbjct: 77 EKVLAQNRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQF 134
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 135 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 169
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 171 IHFHEINNKMVECKKAQPK-EVMTPTGSA 198
>gi|226478812|emb|CAX72901.1| RNA-binding protein Musashi homolog 2 [Schistosoma japonicum]
Length = 345
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL TT E L+ +F+++GE+ + ++M+DP+TKRSRGFGF+T+S+ V+ +
Sbjct: 79 KMFIGGLSPTTTSEVLRDYFQKYGELREYMIMRDPLTKRSRGFGFVTFSDPMCVEKVLEA 138
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +D + ++ K AVPR + + K++F+GG+ Q ++L EYFSQFG +ES
Sbjct: 139 APHILDFKKIDPKLAVPRKSGQNTKISTKTKRVFIGGVATQTTNEELSEYFSQFGKLESC 198
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + +K+ L ++ VE
Sbjct: 199 ELMMDKSTNRHRGFGFVTFESEESAEKVCEIHFHDLHNKMVE 240
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
++VFIGG+ +TT+E L +F Q+G++ +M D T R RGFGF+T+ + +
Sbjct: 169 KRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCE 228
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H++ ++VE K+AVP++
Sbjct: 229 IHFHDLHNKMVEAKKAVPKE 248
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 100/155 (64%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+TY+E V
Sbjct: 17 SPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+ ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 77 EKVLAQNRHELDSKTIDPKVAFPRRA--QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQF 134
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 135 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 169
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 171 IHFHEINNKMVECKKAQPK-EVMTPTGSA 198
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T+ E+LQ +F ++GE++D VVMK+ T RSRGFGF+T+++ + V+ A+ N
Sbjct: 19 KLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 78
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ K+F+GGL E DLR +F ++GT+ V
Sbjct: 79 GPHTLDGRTIDPKPCNPRSQH-KPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGTVMEV 137
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F + V++ + ++VE
Sbjct: 138 VIMYDQEKKKSRGFGFLSFENESAVERATTDHFVHISGKQVE 179
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVF+GGL T+ L++FF ++G +++VV+M D K+SRGFGF+++ V+ A ++
Sbjct: 109 KVFLGGLPPNITETDLRSFFCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVERATTD 168
Query: 78 RPHNIDGRVVETKRAVPRD 96
+I G+ VE K+A PRD
Sbjct: 169 HFVHISGKQVEVKKAEPRD 187
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/146 (41%), Positives = 98/146 (67%), Gaps = 8/146 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV- 164
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ ++ E + +E+F+QFG +
Sbjct: 165 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQEFKEFFTQFGRVIDA 218
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVD 162
++ +K+TG RGF F+ F+ V+
Sbjct: 219 TLMIDKDTGRPRGFGFVTFDSEAAVE 244
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + FF Q+G ++D +M D
Sbjct: 164 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMID 223
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T R RGFGF+T+ V+ A+S RP I G+ +E K+A PR
Sbjct: 224 KDTGRPRGFGFVTFDSEAAVEAALS-RPLAICGKPIEVKKAQPR 266
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/146 (41%), Positives = 98/146 (67%), Gaps = 8/146 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV- 164
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ ++ E + +E+F+QFG +
Sbjct: 165 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQEFKEFFTQFGRVIDA 218
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVD 162
++ +K+TG RGF F+ F+ V+
Sbjct: 219 TLMIDKDTGRPRGFGFVTFDSEAAVE 244
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + FF Q+G ++D +M D
Sbjct: 164 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMID 223
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T R RGFGF+T+ V+ A+S RP I G+ +E K+A PR
Sbjct: 224 KDTGRPRGFGFVTFDSEAAVEAALS-RPLAICGKPIEVKKAQPR 266
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 100/149 (67%), Gaps = 8/149 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ +AK V+ M
Sbjct: 121 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMV- 179
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ + D + +EYF+QFG +
Sbjct: 180 KEHFLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDQEFKEYFAQFGRVVDA 233
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K+TG RGF F+ F + VD +
Sbjct: 234 TLMMDKDTGRPRGFGFVTFENEAGVDACI 262
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ TTD+ + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 199 EQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGV 258
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
DA N P I G+ +E K+A PR +
Sbjct: 259 -DACINVPLEIHGKPIEVKKAQPRGNL 284
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + D LR+YF+QFG + ++ + TG RGF F+ F D V+ IV+
Sbjct: 121 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVN-IVMV 179
Query: 168 KITLL 172
K L
Sbjct: 180 KEHFL 184
>gi|156407160|ref|XP_001641412.1| predicted protein [Nematostella vectensis]
gi|156228551|gb|EDO49349.1| predicted protein [Nematostella vectensis]
Length = 177
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 104/159 (65%), Gaps = 10/159 (6%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+E L+ +F QWG IVD V+MK RSRGFGF+TY + V++ +
Sbjct: 1 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKR--DGRSRGFGFVTYESSDSVNEVLKK 58
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQF------ 130
+ H +D R +E KR+VPRDE G PEA + +K+FVGGL E+D++EYF+
Sbjct: 59 KDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKNGM 118
Query: 131 GTIESVNMVTNKETGAK-RGFAFIEFNDYDVVDKIVLSK 168
G + V++ +++ + RGFAF+ F++ ++V+K+ K
Sbjct: 119 GEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMK 157
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+F+GGL + E+ L++YFSQ+GTI V+ V K G RGF F+ + D V++++
Sbjct: 1 KIFIGGLNWNTTEEGLKDYFSQWGTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLKK 58
Query: 168 KITLLLDRRVE 178
K +L DR +E
Sbjct: 59 KDHVLDDREIE 69
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQW------GEIVDVVVMKDPIT-KRSRGFGF 62
PE++ RK+F+GGL T +E ++ +F GE++DV + +D KR RGF F
Sbjct: 82 PEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAF 141
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+T+ ++V+ + + H I + E K+A P+
Sbjct: 142 VTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQ 174
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 100/149 (67%), Gaps = 8/149 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ +AK V+ M
Sbjct: 116 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMV- 174
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ +D + + RE+F+QFG +
Sbjct: 175 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQDTTDQEFREFFAQFGRVIDA 228
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K+TG RGF F+ F VD +
Sbjct: 229 TLMMDKDTGRPRGFGFVTFESEAGVDACI 257
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY-SEAKM 70
E E K+F+GG+ TTD+ + FF Q+G ++D +M D T R RGFGF+T+ SEA +
Sbjct: 194 EQEKTSKIFVGGVSQDTTDQEFREFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGV 253
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEI 98
DA N P I G+ +E KRA PR +
Sbjct: 254 --DACINIPLEIHGKPIEVKRAQPRGNL 279
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + D LR+YFSQFG + ++ + TG RGF F+ F D V+ +++
Sbjct: 116 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 175
Query: 168 KITL 171
+ L
Sbjct: 176 EHYL 179
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 103/155 (66%), Gaps = 8/155 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ +AK V+ M
Sbjct: 48 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMV- 106
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ + D + ++YF+QFG +
Sbjct: 107 KEHFLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDQEFKDYFAQFGRVVDA 160
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F + VD + + + +
Sbjct: 161 TLMMDKDTGRPRGFGFVTFESEEGVDACLKTHLEI 195
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ TTD+ + +F Q+G +VD +M D T R RGFGF+T+ + V
Sbjct: 126 EQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEEGV 185
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
D + I G+ +E K+A PR +
Sbjct: 186 DACLKTH-LEIHGKPIEVKKAQPRGNL 211
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ T RSRGFGF+T+++ + VD A+ N
Sbjct: 13 KLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRALEN 72
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ K+F+GGL E DLR +F ++G + V
Sbjct: 73 GPHTLDGRTIDPKPCNPRSQH-KPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGNVMEV 131
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F + V++ + ++VE
Sbjct: 132 VIMYDQEKKKSRGFGFLSFENEVAVERATTDHFVHISGKQVE 173
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVF+GGL T+ L++FF ++G +++VV+M D K+SRGFGF+++ V+ A ++
Sbjct: 103 KVFLGGLPPNITETDLRSFFCRYGNVMEVVIMYDQEKKKSRGFGFLSFENEVAVERATTD 162
Query: 78 RPHNIDGRVVETKRAVPRD 96
+I G+ VE K+A PRD
Sbjct: 163 HFVHISGKQVEVKKAEPRD 181
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 102/155 (65%), Gaps = 8/155 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+++ VM+D + RSRGFGF+T+ +A+ V+ M +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K+FVGG+ ++ E D +EYF QFG +
Sbjct: 60 EHYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQEATEQDFKEYFMQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +K+TG RGF F+ F+ VD + S + +L
Sbjct: 114 LMMDKDTGRPRGFGFVTFDSEAAVDACLDSPLEIL 148
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + +F Q+G +VD +M D
Sbjct: 58 VKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKEYFMQFGRVVDATLMMD 117
Query: 52 PITKRSRGFGFITY-SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ SEA + DA + P I G+ +E K+A PR +
Sbjct: 118 KDTGRPRGFGFVTFDSEAAV--DACLDSPLEILGKPIEVKKAQPRGNM 163
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 104/162 (64%), Gaps = 9/162 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +++F QFG +
Sbjct: 172 E-HYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEANEQDFKQFFMQFGRVVDA 224
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 225 TLMIDKDTGRPRGFGFVTF-DSEAAVEAALSRPLEILGKPIE 265
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ ++ + FF Q+G +VD +M D
Sbjct: 170 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID 229
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ A+S RP I G+ +E K+A PR +
Sbjct: 230 KDTGRPRGFGFVTFDSEAAVEAALS-RPLEILGKPIEVKKAQPRGNL 275
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 102/160 (63%), Gaps = 8/160 (5%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P RK+FIGGL++ TTD+SL+ +F +GE+V+ VM+D T RSRGFGF+T+ + K V+
Sbjct: 10 PLYFRKMFIGGLNWETTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVN 69
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFG 131
M + H +DG++++ KRA+PRDE K K+FVGG+ + D + REYF+QFG
Sbjct: 70 IVMV-KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDHEFREYFAQFG 122
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
+ ++ +K+TG RGF F+ F V+ + + + +
Sbjct: 123 RVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSANLEI 162
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD + +F Q+G +VD +M D
Sbjct: 73 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMD 132
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
T R RGFGF+T+ V+ +S I G+ +E K+A PR + + E N
Sbjct: 133 KDTGRPRGFGFVTFESEAGVEACLSAN-LEIHGKPIEVKKAQPRGNLREEEEN 184
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 113/177 (63%), Gaps = 13/177 (7%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK ES K+FIGGL++ TT+E L+ +F ++G +VD+ +MKD + RSRGFGF
Sbjct: 220 PRADLSK----ESC-KLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGF 274
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEED 121
+++ VD+ + ++ H +DG+V++ KRA+PR+E K K+FVGG+ D
Sbjct: 275 LSFEHPSSVDEVVKSQ-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGPDVRPK 327
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+ E+F+Q+GTI ++ +K+TG RGF FI ++ + VD++ +K D+++E
Sbjct: 328 EFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSGEAVDRVCQNKYIQFKDKQIE 384
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T RSRGFGFITY + VD N
Sbjct: 314 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSGEAVDRVCQN 373
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + +E KRA PR
Sbjct: 374 KYIQFKDKQIEIKRAAPR 391
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 62/146 (42%), Positives = 98/146 (67%), Gaps = 8/146 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV- 167
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +E+F+QFG +
Sbjct: 168 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEANEHDFKEFFAQFGRVIDA 221
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVD 162
++ +K+TG RGF F+ F+ V+
Sbjct: 222 TLMIDKDTGRPRGFGFVTFDSEAAVE 247
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ + + FF Q+G ++D +M D
Sbjct: 167 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMID 226
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T R RGFGF+T+ V+ A+S P I G+ +E K+A PR
Sbjct: 227 KDTGRPRGFGFVTFDSEAAVEAALSG-PLEICGKPIEVKKAQPR 269
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + D L++YFSQFG ++ ++ + TG RGF F+ F D V+ +++
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 168 K 168
+
Sbjct: 169 E 169
>gi|301753349|ref|XP_002912535.1| PREDICTED: hypothetical protein LOC100472152 [Ailuropoda
melanoleuca]
Length = 642
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 371 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 429
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 430 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 483
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 484 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 530
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 466 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 525
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 526 IMEKKYHNVGLSKCEIKVAMSKE 548
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 105/165 (63%), Gaps = 8/165 (4%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+C ++L K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ +
Sbjct: 146 ECISDDALDKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDP 205
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYF 127
K V+ M + H +DG++++ KRA+PRDE K+FVGG+ ++ E D +++F
Sbjct: 206 KTVNTVMV-KEHYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQEATEQDFKQFF 258
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
QFG + ++ +K++G RGF F+ F+ V+ + + +L
Sbjct: 259 MQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL 303
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + FF Q+G +VD +M D
Sbjct: 213 VKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMID 272
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ R RGFGF+T+ V+ +S P I G+ +E K+A PR
Sbjct: 273 KDSGRPRGFGFVTFDSEAAVEATLSG-PLEILGKPIEVKKAQPR 315
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT++ L+ +F ++G ++D+ +MKDP + RSRGFGF+T+ E VD+ +
Sbjct: 158 KMFIGGLNWETTEDGLREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFEEPSSVDEVVKT 217
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KR++PR+E K K+FVGG+ D + E+FSQ+GTI
Sbjct: 218 Q-HILDGKVIDPKRSIPREEQDK------TGKIFVGGIGADVRPKEFEEFFSQYGTIIDA 270
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ + VD++ +K +++E
Sbjct: 271 QLMLDKDTGRSRGFGFVTYDSPEAVDRVCQNKYIDFKGKQIE 312
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF Q+G I+D +M D T RSRGFGF+TY + VD N
Sbjct: 242 KIFVGGIGADVRPKEFEEFFSQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPEAVDRVCQN 301
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + G+ +E KRA PR
Sbjct: 302 KYIDFKGKQIEIKRAEPR 319
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT E+LQ +F ++GE++D VVMK+ T RSRGFGF+T+++ + V+ A+ N
Sbjct: 20 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 79
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ K+F+GGL E DLR +FS++G + V
Sbjct: 80 GPHTLDGRTIDPKPCNPRS-LHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEV 138
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F + V++ + ++VE
Sbjct: 139 VIMYDQEKKKSRGFGFLSFENEAAVERATAEHFVNISGKQVE 180
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P SL K VF+GGL T+ L++FF ++G +++VV+M D K+S
Sbjct: 90 DPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKS 149
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
RGFGF+++ V+ A + NI G+ VE K+A PRD G
Sbjct: 150 RGFGFLSFENEAAVERATAEHFVNISGKQVEIKKAEPRDGSGN 192
>gi|440632909|gb|ELR02828.1| hypothetical protein GMDG_05764 [Geomyces destructans 20631-21]
Length = 544
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 101/156 (64%), Gaps = 8/156 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D + RSRGFGF+T+ +A+ V+ M
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFKDARTVNVVMVK 162
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG++++ KRA+PRDE K+FVGG+ ++ E D +EYF QFG +
Sbjct: 163 E-HYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQEASELDFKEYFMQFGRVVDA 215
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +K+TG RGF F+ F+ VD + + +L
Sbjct: 216 TLMMDKDTGRPRGFGFVTFDSEAAVDACINIPLEIL 251
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ ++ + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 181 EQERTSKIFVGGVSQEASELDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAV 240
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
DA N P I G+ +E K+A PR +
Sbjct: 241 -DACINIPLEILGKPIEVKKAQPRGNV 266
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 35 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 93
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + EA+ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 94 VLFKEAESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 147
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 148 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 194
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 130 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 189
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 190 IMEKKYHNVGLSKCEIKVAMSKE 212
>gi|432908112|ref|XP_004077759.1| PREDICTED: DAZ-associated protein 1-like [Oryzias latipes]
Length = 449
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL T D+ L+ FEQ+G + D VV+++ +RSR FGF+TYS + + AM+
Sbjct: 54 KLFIGGLCVNTNDDGLRKHFEQFGTLTDFVVLQNKNAQRSRCFGFVTYSTPEEANAAMAA 113
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
PH ++G VE KRA+P+ + K EA A +K+FVGGL+ D +E L +YFS +G +E
Sbjct: 114 APHTVEGNSVEVKRAIPKAKDNKSEAFAKGEKIFVGGLRNDIKESHLTDYFSWYGQVEKS 173
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ KETG KRGF F+ F ++ D ++ K + VE
Sbjct: 174 EILLEKETGKKRGFGFVHFTHHNSADLALVVKYHTVNGHLVE 215
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 129
+ AM+ PH + V+ K AVP+ + A A +K+FVGGLK+ EE L +YFS+
Sbjct: 264 TNTAMAAAPHTVQRNSVKVKVAVPKRKANGSAAPAKGEKIFVGGLKNNIEEYHLTDYFSR 323
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+G +E ++ +KETG KRGF F+ F + D ++ K + VE
Sbjct: 324 YGQVEKSEILLDKETGKKRGFGFVHFTHHKTADLALVEKYHTVNGHLVE 372
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
P+ + P K+F+GGL + L +F ++G++ ++ D T + RGFGF
Sbjct: 287 PKRKANGSAAPAKGEKIFVGGLKNNIEEYHLTDYFSRYGQVEKSEILLDKETGKKRGFGF 346
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ ++ K D A+ + H ++G +VE K+AV R E+
Sbjct: 347 VHFTHHKTADLALVEKYHTVNGHLVEVKKAVARQEM 382
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
P+ D+K K+F+GGL + L +F +G++ ++ + T + RGFGF
Sbjct: 130 PKAKDNKSEAFAKGEKIFVGGLRNDIKESHLTDYFSWYGQVEKSEILLEKETGKKRGFGF 189
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ ++ D A+ + H ++G +VE K+AV + E+
Sbjct: 190 VHFTHHNSADLALVVKYHTVNGHLVEVKKAVAKQEM 225
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 107 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 156
V K+F+GGL DD LR++F QFGT+ ++ NK R F F+ ++
Sbjct: 52 VCKLFIGGLCVNTNDDGLRKHFEQFGTLTDFVVLQNKNAQRSRCFGFVTYS 102
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S K+F+GG+ + TT+E+ F ++G I D V+MKD TK RGFGF+T+S+ ++D
Sbjct: 63 SSGKIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 122
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTI 133
+ + HNIDGR VE KR VPR+E+ + T +K+FVGGL EDDLR++FS +G +
Sbjct: 123 LEDE-HNIDGRTVEVKRTVPREEMSSKDGPKT-RKIFVGGLPASLSEDDLRDHFSSYGKV 180
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ + TG RGF F+ F D V++++
Sbjct: 181 VEHQIMVDHSTGRSRGFGFVTFESEDSVERVI 212
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S P++ RK+F+GGL +++ L+ F +G++V+ +M D T RSRGFGF
Sbjct: 141 PREEMSSKDGPKT-RKIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGF 199
Query: 63 ITYSEAKMVDDAMS-NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
+T+ V+ +S R ++ G+ VE K+A P+ G +N
Sbjct: 200 VTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHSSNG 243
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 107/174 (61%), Gaps = 7/174 (4%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
+E + + K+F+GGL TTD+ L+ F +GEIV+ +VM+D +T+ SRGFGF+ Y++A
Sbjct: 2 SEGDEVGKIFVGGLTRETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAGA 61
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK-----KMFVGGL-KDQEEDDLR 124
V + + NRPH +D + ++ K P+ I + + NA ++ K+F+GGL ++ E++++
Sbjct: 62 VAEVLKNRPHTLDNKKIDPKPCTPKT-IQQQKKNAQIEHTQTHKIFIGGLAQNATEEEVK 120
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YFSQ+G++ V V NKE +GF F+ F VD+ V + +RVE
Sbjct: 121 AYFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQAVGKHFHEICGKRVE 174
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E K+FIGGL T+E ++A+F Q+G + +VV + + R +GFGF+T+ V
Sbjct: 98 EHTQTHKIFIGGLAQNATEEEVKAYFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAV 157
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ H I G+ VE KRA PR+ +
Sbjct: 158 DQAVGKHFHEICGKRVEAKRATPRETM 184
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 62/146 (42%), Positives = 98/146 (67%), Gaps = 8/146 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV- 167
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +E+F+QFG +
Sbjct: 168 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEANEHDFKEFFAQFGRVIDA 221
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVD 162
++ +K+TG RGF F+ F+ V+
Sbjct: 222 TLMIDKDTGRPRGFGFVTFDSEAAVE 247
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ + + FF Q+G ++D +M D
Sbjct: 167 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMID 226
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T R RGFGF+T+ V+ A+S P I G+ +E K+A PR
Sbjct: 227 KDTGRPRGFGFVTFDSEAAVEAALSG-PLEICGKPIEVKKAQPR 269
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + D L++YFSQFG ++ ++ + TG RGF F+ F D V+ +++
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 168 K 168
+
Sbjct: 169 E 169
>gi|327291027|ref|XP_003230223.1| PREDICTED: DAZ-associated protein 1-like, partial [Anolis
carolinensis]
Length = 170
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 99/159 (62%), Gaps = 11/159 (6%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 RPHNIDGRVVETKRAVPRD---EIGKPE-------ANATVKKMFVGGL-KDQEEDDLREY 126
RPH +DGR ++ K PR E +P+ +++ K+FVGG+ + E +LREY
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGSRSDSKSNKIFVGGIPHNCGETELREY 120
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
F +FG + V M+ + E RGF FI F D VD+ V
Sbjct: 121 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 159
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 46/68 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD A++
Sbjct: 102 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 161
Query: 78 RPHNIDGR 85
H+I G+
Sbjct: 162 HFHDIMGK 169
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGGL ++ LR YFSQ+G + ++ +K T RGF F++F D + V ++ S
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 168 KITLLLDRRVE 178
+ L R ++
Sbjct: 61 RPHTLDGRNID 71
>gi|308510723|ref|XP_003117544.1| hypothetical protein CRE_00749 [Caenorhabditis remanei]
gi|308238190|gb|EFO82142.1| hypothetical protein CRE_00749 [Caenorhabditis remanei]
Length = 336
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 96/162 (59%), Gaps = 14/162 (8%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P LRK+FIGGL + TTDE L +F QWG +VD +V++DP TK SRGFGF+T++ +
Sbjct: 66 PPQLRKLFIGGLSHETTDEQLGNYFSQWGPVVDAIVIRDPTTKHSRGFGFVTFASIFSAE 125
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGK--PEA-----NATVKKMFVGGLKD--QEEDDL 123
AM++RPH + G+ V++KRA+PR+++ P A K+ + G+ D L
Sbjct: 126 SAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLSGITSGIHSVDSL 185
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
R YF FGT++ V ++ G RG F+ + D + D+ +
Sbjct: 186 RVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 104/162 (64%), Gaps = 9/162 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +++F QFG +
Sbjct: 87 E-HYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQDFKQFFMQFGRVVDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 140 TLMIDKDTGRPRGFGFVTF-DSEAAVEATLSRPLEILGKSIE 180
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T++ + FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 105 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 164
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ +S RP I G+ +E K+A PR +
Sbjct: 165 EATLS-RPLEILGKSIEVKKAQPRGNL 190
>gi|410915348|ref|XP_003971149.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 4
[Takifugu rubripes]
Length = 350
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 82 QHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF FI F + D+V+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVE 181
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGFIT+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 103/160 (64%), Gaps = 5/160 (3%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+S P S K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T++
Sbjct: 9 NSALLSPSS--KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 66
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
+ VD ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++
Sbjct: 67 DPASVDKVLAQPHHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSANTVVEDVKQ 124
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
YF QFG +E ++ +K T RGF F+ F + DVV+K+
Sbjct: 125 YFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 164
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPP 190
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 100/154 (64%), Gaps = 8/154 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ + D + REYF+QFG +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDHEFREYFAQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F VD + + + +
Sbjct: 114 LMMDKDTGRPRGFGFVTFESEAGVDACLSANLEI 147
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD + +F Q+G +VD +M D
Sbjct: 58 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMD 117
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ VD +S I G+ +E K+A PR +
Sbjct: 118 KDTGRPRGFGFVTFESEAGVDACLSAN-LEIHGKPIEVKKAQPRGNL 163
>gi|353232013|emb|CCD79368.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 260
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+FIGGL +T + SL+ ++ QWGEI+DVVVMKDP +++SRGFGF+TY ++ VD A +
Sbjct: 14 KKLFIGGLSPKTDENSLKNYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYKDSSSVDAAQN 73
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDL 123
NRPH +DG+ V+TKRA+PR+E PE +A VKK+FVG L KD +DL
Sbjct: 74 NRPHTVDGKEVDTKRAMPREET-SPEVHAAVKKIFVGALKKDVTNEDL 120
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 108 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
KK+F+GGL + +E+ L+ Y+ Q+G I V ++ + + RGF F+ + D VD
Sbjct: 14 KKLFIGGLSPKTDENSLKNYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYKDSSSVD 69
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 96/149 (64%), Gaps = 3/149 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + TT+E+ F ++G I D V+MKD TK RGFGF+T+S+ ++D + +
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 105
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
HNIDGR VE KR VPR+E+ + T +K+FVGGL EDDLR++FS +G +
Sbjct: 106 E-HNIDGRTVEVKRTVPREEMSSKDGPKT-RKIFVGGLPASLSEDDLRDHFSSYGKVVEH 163
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ + TG RGF F+ F D V++++
Sbjct: 164 QIMVDHSTGRSRGFGFVTFESEDSVERVI 192
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S P++ RK+F+GGL +++ L+ F +G++V+ +M D T RSRGFGF
Sbjct: 121 PREEMSSKDGPKT-RKIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGF 179
Query: 63 ITYSEAKMVDDAMS-NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
+T+ V+ +S R ++ G+ VE K+A P+ G +N
Sbjct: 180 VTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHSSNG 223
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 15/176 (8%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGG+ + T ++SL+ +F +GE+V+ V+MKD T R+RGFGF+ +++ + + +
Sbjct: 5 LGKLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVV 64
Query: 76 SNRPHNIDGRVVETKRAVPRDE------------IGKPEANATVKKMFVGGLKDQ-EEDD 122
+ + H IDGR+VE K+AVPRD+ G P T KK+FVGGL E D
Sbjct: 65 TEK-HTIDGRMVEAKKAVPRDDHQFLNKNSSSSIHGSPVPGHT-KKIFVGGLSSTITEGD 122
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++YF QFGTI V ++ + T RGF FI ++ D VDK++L+ L + VE
Sbjct: 123 FKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLNAFHELNGKMVE 178
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P +K+F+GGL T+ + +F+Q+G I DVVVM D T+R RGFGFITY VD
Sbjct: 103 PGHTKKIFVGGLSSTITEGDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVD 162
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKP 101
+ N H ++G++VE KRAVP++ P
Sbjct: 163 KVLLNAFHELNGKMVEVKRAVPKEPSPGP 191
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 65/162 (40%), Positives = 105/162 (64%), Gaps = 9/162 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 100 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV- 158
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +++F QFG +
Sbjct: 159 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEANEQDFKQFFMQFGRVVDA 212
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F+ V+ LS+ +L + +E
Sbjct: 213 TLMIDKDTGRPRGFGFVTFDSEAAVEA-ALSRPLEILGKPIE 253
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ ++ + FF Q+G +VD +M D
Sbjct: 158 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID 217
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T R RGFGF+T+ V+ A+S RP I G+ +E K+A PR
Sbjct: 218 KDTGRPRGFGFVTFDSEAAVEAALS-RPLEILGKPIEVKKAQPR 260
>gi|340515592|gb|EGR45845.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 99/149 (66%), Gaps = 8/149 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D + RSRGFGF+T+ + K V+ M
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMV- 171
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ +D + + REYF+QFG +
Sbjct: 172 KEHFLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQDTTDQEFREYFAQFGRVVDA 225
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K+TG RGF F+ F VD +
Sbjct: 226 TLMMDKDTGRPRGFGFVTFESEAGVDACI 254
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY-SEAKM 70
E E K+F+GG+ TTD+ + +F Q+G +VD +M D T R RGFGF+T+ SEA +
Sbjct: 191 EQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 250
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEI 98
DA N P I G+ +E K+A PR +
Sbjct: 251 --DACINVPLEIHGKPIEVKKAQPRGNL 276
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + D LR+YFSQFG + ++ + +G RGF F+ F D V+ IV+
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVN-IVMV 171
Query: 168 KITLL 172
K L
Sbjct: 172 KEHFL 176
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 65/162 (40%), Positives = 105/162 (64%), Gaps = 9/162 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV- 170
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +++F QFG +
Sbjct: 171 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEANEQDFKQFFMQFGRVVDA 224
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F+ V+ LS+ +L + +E
Sbjct: 225 TLMIDKDTGRPRGFGFVTFDSEAAVEA-ALSRPLEILGKPIE 265
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ ++ + FF Q+G +VD +M D
Sbjct: 170 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID 229
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T R RGFGF+T+ V+ A+S RP I G+ +E K+A PR
Sbjct: 230 KDTGRPRGFGFVTFDSEAAVEAALS-RPLEILGKPIEVKKAQPR 272
>gi|238880917|gb|EEQ44555.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 475
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 105/163 (64%), Gaps = 8/163 (4%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK FIGGL + TT+E+L + F+++G IVD +MKD T RSRGFGF+T+ +AK VD +
Sbjct: 162 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 221
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 135
+R H +DG++++ KRA+ +++ K V K+FVGG+ E++ +FSQFG I
Sbjct: 222 DR-HVLDGKLIDPKRAISKEDQEK------VGKIFVGGIDPMVTEEEFDNFFSQFGKIID 274
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ VDK+ ++K L + +E
Sbjct: 275 CQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAME 317
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E + K+F+GG+D T+E FF Q+G+I+D +M D T RSRGFGF+TY VD
Sbjct: 243 EKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDK 302
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
N+ + G+ +E KRA PR +
Sbjct: 303 VCVNKYLTLKGKAMEVKRAAPRGQ 326
>gi|410915344|ref|XP_003971147.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Takifugu rubripes]
Length = 407
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 82 QHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF FI F + D+V+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVE 181
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGFIT+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 75 DKVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 167
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF
Sbjct: 5 APQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|68465675|ref|XP_723199.1| likely RNA binding protein [Candida albicans SC5314]
gi|68465968|ref|XP_723052.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445066|gb|EAL04337.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445222|gb|EAL04492.1| likely RNA binding protein [Candida albicans SC5314]
Length = 475
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 105/163 (64%), Gaps = 8/163 (4%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK FIGGL + TT+E+L + F+++G IVD +MKD T RSRGFGF+T+ +AK VD +
Sbjct: 162 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 221
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 135
+R H +DG++++ KRA+ +++ K V K+FVGG+ E++ +FSQFG I
Sbjct: 222 DR-HVLDGKLIDPKRAISKEDQEK------VGKIFVGGIDPMVTEEEFDNFFSQFGKIID 274
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ VDK+ ++K L + +E
Sbjct: 275 CQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAME 317
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E + K+F+GG+D T+E FF Q+G+I+D +M D T RSRGFGF+TY VD
Sbjct: 243 EKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDK 302
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
N+ + G+ +E KRA PR +
Sbjct: 303 VCVNKYLTLKGKAMEVKRAAPRGQ 326
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 105/162 (64%), Gaps = 9/162 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV- 171
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +++F QFG +
Sbjct: 172 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQDFKQFFMQFGRVVDA 225
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 226 TLMIDKDTGRPRGFGFVTF-DSEAAVEATLSRPLEILGKSIE 266
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T++ + FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 191 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 250
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ +S RP I G+ +E K+A PR +
Sbjct: 251 EATLS-RPLEILGKSIEVKKAQPRGNL 276
>gi|410915342|ref|XP_003971146.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Takifugu rubripes]
Length = 388
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 82 QHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF FI F + D+V+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVE 181
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGFIT+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|241953399|ref|XP_002419421.1| cleavage and polyadenylation factor CF I component, putative;
nuclear polyadenylated RNA-binding protein, putative
[Candida dubliniensis CD36]
gi|223642761|emb|CAX43015.1| cleavage and polyadenylation factor CF I component, putative
[Candida dubliniensis CD36]
Length = 505
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 105/163 (64%), Gaps = 8/163 (4%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK FIGGL + TT+E+L + F+++G IVD +MKD T RSRGFGF+T+ +AK VD +
Sbjct: 186 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 245
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 135
+R H +DG++++ KRA+ +++ K V K+FVGG+ E++ +FSQFG I
Sbjct: 246 DR-HVLDGKLIDPKRAISKEDQEK------VGKIFVGGIDPMVTEEEFDNFFSQFGKIID 298
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ VDK+ ++K L + +E
Sbjct: 299 CQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAME 341
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E + K+F+GG+D T+E FF Q+G+I+D +M D T RSRGFGF+TY VD
Sbjct: 267 EKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDK 326
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
N+ + G+ +E KRA PR +
Sbjct: 327 VCVNKYLTLKGKAMEVKRAAPRGQ 350
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 75 DKVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 167
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF
Sbjct: 5 APQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G+++D+ +MKD T RSRGFGF+T+ E VD+ +
Sbjct: 158 KMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDEVVKT 217
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + E+F+Q+GTI
Sbjct: 218 Q-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGADVRPKEFEEFFAQWGTIIDA 270
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K +++E
Sbjct: 271 QLMLDKDTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKKIE 312
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T RSRGFGF+TY VD N
Sbjct: 242 KIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQN 301
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + G+ +E KRA PR
Sbjct: 302 KFIDFKGKKIEIKRAEPR 319
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 107 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+ KMF+GGL + ED LR+YFS++G + + ++ + TG RGF F+ F++ VD++V
Sbjct: 156 ICKMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDEVV 215
Query: 166 LSKITLLLDRRV 177
K +LD +V
Sbjct: 216 --KTQHILDGKV 225
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF FI F DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFITFEGEDVVEKVCEIHFHEINNKMVE 181
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGFIT+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|302307303|ref|NP_983936.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|299788936|gb|AAS51760.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|374107149|gb|AEY96057.1| FADL160Wp [Ashbya gossypii FDAG1]
Length = 526
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 108/164 (65%), Gaps = 8/164 (4%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+FIGGL++ TT+++L+ +F ++G + +V +M+D T RSRGFGF+++++A VD+ +
Sbjct: 162 INKMFIGGLNWETTEDNLREYFSKYGNVTEVKIMRDGTTGRSRGFGFLSFADASSVDEVV 221
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIE 134
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + E+FSQ+G+I
Sbjct: 222 KTQ-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGSII 274
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VD++ +K +R+E
Sbjct: 275 DAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQNKFIEFKGKRIE 318
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T RSRGFGFITY VD N
Sbjct: 248 KIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQN 307
Query: 78 RPHNIDGRVVETKRAVPR 95
+ G+ +E KRA PR
Sbjct: 308 KFIEFKGKRIEIKRAEPR 325
>gi|432100128|gb|ELK29014.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 118
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 77/101 (76%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FI GL + TT+ESL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGLSFETTNESLRSHFEQWGMLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFV 112
D AM+ RPH +DGRVVE KRAV R++ +P A+ KK+FV
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLMGKKIFV 109
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 101 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+ GL + + LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIRGLSFETTNESLRSHFEQWGMLTDCVVMRDPNTKCSRGFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 16 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 76 DKVLAQSRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQF 133
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 134 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 170 IHFHEINNKMVECKKAQPK-EVMSPTGSA 197
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
S K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD
Sbjct: 14 SSSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGT 132
++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG
Sbjct: 74 VLAQPHHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGK 131
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+E ++ +K T RGF F+ F + DVV+K+
Sbjct: 132 VEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 164
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPP 190
>gi|148679912|gb|EDL11859.1| mCG122300 [Mus musculus]
Length = 317
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
Query: 54 TKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVG 113
KRSRGFGF+TYS + VD AM RP+ +DGRVVE KRAV R++ KP A+ TVKK+FVG
Sbjct: 16 NKRSRGFGFVTYSCVEEVDAAMCARPYKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVG 75
Query: 114 GLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
G+K D EE +LR+Y ++G IE++ ++ ++++ KRGFAF+ F+D+D +DKIV+ K +
Sbjct: 76 GIKEDTEEYNLRDYSEKYGKIETIEVMEDRQSEKKRGFAFVTFDDHDTLDKIVVQKYHTI 135
Query: 173 LDRRVE 178
E
Sbjct: 136 NGHNCE 141
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 54/84 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + +L+ + E++G+I + VM+D +++ RGF F+T+ + +D
Sbjct: 68 TVKKIFVGGIKEDTEEYNLRDYSEKYGKIETIEVMEDRQSEKKRGFAFVTFDDHDTLDKI 127
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E K+A+ + E+
Sbjct: 128 VVQKYHTINGHNCEVKKALSKQEM 151
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 75 DKVLAQSRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 167
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF
Sbjct: 5 APQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|410915346|ref|XP_003971148.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Takifugu rubripes]
Length = 328
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 82 QHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF FI F + D+V+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVE 181
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGFIT+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|444509540|gb|ELV09335.1| DAZ-associated protein 1, partial [Tupaia chinensis]
Length = 391
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 99/162 (61%), Gaps = 11/162 (6%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
RPH +DGR + PR + N+ K+FVGG+ + E +LREYF +FG + V
Sbjct: 61 RPHTLDGR----NQKGPRSD------NSKSNKIFVGGIPHNCGETELREYFKKFGVVTEV 110
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 111 VMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 152
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 10/106 (9%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 73 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 126
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE----IGKPEAN 104
IT+ + + VD A++ H+I G+ VE KRA PRD G+P A+
Sbjct: 127 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGAS 172
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 65/162 (40%), Positives = 105/162 (64%), Gaps = 9/162 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV- 169
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +++F QFG +
Sbjct: 170 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQDFKQFFMQFGRVIDA 223
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 224 TLMIDKDTGRPRGFGFVTF-DSEAAVEAALSRPLEILGKTIE 264
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + FF Q+G ++D +M D
Sbjct: 169 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMID 228
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T R RGFGF+T+ V+ A+S RP I G+ +E K+A PR
Sbjct: 229 KDTGRPRGFGFVTFDSEAAVEAALS-RPLEILGKTIEVKKAQPR 271
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 75 DKVLAQTRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 167
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPAGSA 196
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 100/155 (64%), Gaps = 8/155 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTDESL+ +F Q+GE+++ VM+D + RSRGFGF+T+ +A+ V+ M
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K+FVGG+ ++ E D ++YF QFG +
Sbjct: 61 -HYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQEATEQDFKQYFMQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +K+TG RGF F+ F+ V+ + + +L
Sbjct: 114 LMMDKDTGRPRGFGFVTFDSEAAVEACLEGPLEIL 148
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T++ + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQEATEQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + P I G+ +E K+A PR +
Sbjct: 138 EACLEG-PLEILGKPIEVKKAQPRGNM 163
>gi|50294199|ref|XP_449511.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528825|emb|CAG62487.1| unnamed protein product [Candida glabrata]
Length = 513
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 104/162 (64%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT++ L+ +F ++G +V++ +MKDP T RSRGFGF+++ VD+ +
Sbjct: 131 KMFIGGLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDAPSSVDEVVKT 190
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PR+E K K+FVGGL D + EYFSQ+GTI
Sbjct: 191 Q-HILDGKVIDPKRAIPREEQDK------TGKIFVGGLGTDVRPKEFEEYFSQWGTIIDA 243
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D +K+ S+ +++E
Sbjct: 244 QLMLDKDTGRSRGFGFVTYDSPDAAEKVCESRYREFKGKQIE 285
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + + +F QWG I+D +M D T RSRGFGF+TY + +
Sbjct: 215 KIFVGGLGTDVRPKEFEEYFSQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAAEKVCES 274
Query: 78 RPHNIDGRVVETKRAVPRDE 97
R G+ +E KRA PR +
Sbjct: 275 RYREFKGKQIEIKRAEPRHQ 294
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 16 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 76 DKVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQF 133
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 134 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 168
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 170 IHFHEINNKMVECKKAQPK-EVMSPTGSA 197
>gi|119626277|gb|EAX05872.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_a [Homo sapiens]
Length = 377
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 75 DKVLAQSRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 167
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF
Sbjct: 5 APQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 100/149 (67%), Gaps = 8/149 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ +AK V+ M
Sbjct: 117 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMV- 175
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ +D + + R++F+QFG +
Sbjct: 176 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQDTTDQEFRDFFAQFGRVIDA 229
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K+TG RGF F+ F VD +
Sbjct: 230 TLMMDKDTGRPRGFGFVTFESEAGVDNCI 258
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD+ + FF Q+G ++D +M D
Sbjct: 175 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFRDFFAQFGRVIDATLMMD 234
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ VD+ +S P I G+ +E KRA PR +
Sbjct: 235 KDTGRPRGFGFVTFESEAGVDNCIS-IPLEIHGKPIEVKRAQPRGNL 280
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + D LR+YFSQFG + ++ + TG RGF F+ F D V+ +++
Sbjct: 117 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 176
Query: 168 KITL 171
+ L
Sbjct: 177 EHYL 180
>gi|25147051|ref|NP_741783.1| Protein H28G03.1, isoform a [Caenorhabditis elegans]
gi|351064182|emb|CCD72471.1| Protein H28G03.1, isoform a [Caenorhabditis elegans]
Length = 336
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 105/177 (59%), Gaps = 16/177 (9%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P LRK+FIGGL + TTDE L +F QWG +VD +V++DP TK SRGFGF+T++ +
Sbjct: 66 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 125
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGK--PEA-----NATVKKMFVGGLKD--QEEDDL 123
AM++RPH + G+ V++KRA+PR+++ P A K+ + G+ + D L
Sbjct: 126 SAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSL 185
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL--SKITLLLDRRVE 178
R YF FGT++ V ++ G RG F+ + D + D+ + S ++ +R++E
Sbjct: 186 RVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 237
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 100/160 (62%), Gaps = 5/160 (3%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
S P S K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+
Sbjct: 13 SSPTYHPSS--KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFM 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
+ VD ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++
Sbjct: 71 DQAGVDKVLAQSRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQ 128
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
YF QFG ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 129 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 170 IHFHEINNKMVECKKAQPK-EVMSPTGSA 197
>gi|74001695|ref|XP_848950.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Canis lupus familiaris]
Length = 306
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|410921768|ref|XP_003974355.1| PREDICTED: DAZ-associated protein 1-like [Takifugu rubripes]
Length = 435
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 16/175 (9%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANAT-------------VKKMFVGGLKDQ-EEDDL 123
+PHN+DGR ++ K PR +PE + T KK+FVGG+ E +L
Sbjct: 72 KPHNLDGRNIDPKPCTPRGM--QPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPEL 129
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YF++FG + V M+ + E RGF FI F VD+ V ++ ++VE
Sbjct: 130 RDYFNRFGAVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVE 184
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFGFIT+ + VD A++
Sbjct: 113 KKIFVGGIPHNCGEPELRDYFNRFGAVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 77 NRPHNIDGRVVETKRAVPRDE 97
H+I G+ VE K+A PRD
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDS 193
>gi|209156106|gb|ACI34285.1| DAZ-associated protein 1 [Salmo salar]
Length = 436
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 102/174 (58%), Gaps = 14/174 (8%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 RPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
+PHN+DGR ++ K PR + K ++N + KK+FVGG+ E +LR
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKVRTKDGWKGSKADSNKS-KKIFVGGIPHNCGEPELR 130
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF++FG + V M+ + E RGF FI F VD+ V ++ ++VE
Sbjct: 131 EYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVE 184
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFGFIT+ + VD A++
Sbjct: 113 KKIFVGGIPHNCGEPELREYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 77 NRPHNIDGRVVETKRAVPRDE 97
H+I G+ VE K+A PRD
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDS 193
>gi|25147057|ref|NP_741784.1| Protein H28G03.1, isoform c [Caenorhabditis elegans]
gi|351064184|emb|CCD72473.1| Protein H28G03.1, isoform c [Caenorhabditis elegans]
Length = 335
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 105/177 (59%), Gaps = 16/177 (9%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P LRK+FIGGL + TTDE L +F QWG +VD +V++DP TK SRGFGF+T++ +
Sbjct: 65 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 124
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGK--PEA-----NATVKKMFVGGLKD--QEEDDL 123
AM++RPH + G+ V++KRA+PR+++ P A K+ + G+ + D L
Sbjct: 125 SAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSL 184
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL--SKITLLLDRRVE 178
R YF FGT++ V ++ G RG F+ + D + D+ + S ++ +R++E
Sbjct: 185 RVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 236
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 75 DKVLAQTRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 167
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPAGSA 196
>gi|116256514|ref|NP_031542.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Mus musculus]
gi|29145079|gb|AAH49098.1| Heterogeneous nuclear ribonucleoprotein D [Mus musculus]
gi|148688366|gb|EDL20313.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Mus
musculus]
Length = 306
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHTEAAAAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 103/161 (63%), Gaps = 9/161 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +++F QFG +
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQDFKQFFMQFGRVIDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 114 LMIDKDTGRPRGFGFVTF-DSEAAVEAALSRPLEILGKTIE 153
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + FF Q+G ++D +M D
Sbjct: 58 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMID 117
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ A+S RP I G+ +E K+A PR +
Sbjct: 118 KDTGRPRGFGFVTFDSEAAVEAALS-RPLEILGKTIEVKKAQPRGNL 163
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 75 DKVLAQTRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 167
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPAGSA 196
>gi|119193228|ref|XP_001247220.1| hypothetical protein CIMG_00991 [Coccidioides immitis RS]
Length = 506
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 104/162 (64%), Gaps = 9/162 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMV- 69
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K+FVGG+ +D E D +++F QFG +
Sbjct: 70 KEHYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDA 123
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 124 TLMIDKDTGRPRGFGFVTF-DSEAAVEACLSQPLEILGKPIE 164
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ ++ + FF Q+G +VD +M D
Sbjct: 69 VKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMID 128
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ +S +P I G+ +E K+A PR +
Sbjct: 129 KDTGRPRGFGFVTFDSEAAVEACLS-QPLEILGKPIEVKKAQPRGNL 174
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 97/149 (65%), Gaps = 3/149 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + TT+E+LQ +FE +G ++D V+M+D T RGFGF+T+ + + D A +
Sbjct: 51 KIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRAATK 110
Query: 78 RPHNIDGRVVETKRAVPRDE-IGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 135
R H +DGR VE K+AVP+ E I + + +K+FVGGL E+D EYF + G +
Sbjct: 111 R-HELDGRQVEAKKAVPKAEYITRSQVTKPTRKIFVGGLPLSCTEEDFMEYFERLGHVVE 169
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
+++ + +TG RGF F+ F+ D+V+K+
Sbjct: 170 AHIMYDHQTGISRGFGFVTFSSEDMVEKV 198
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
S+ T+P RK+F+GGL T+E +FE+ G +V+ +M D T SRGFGF+T+S
Sbjct: 134 SQVTKP--TRKIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSS 191
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPR 95
MV+ H I G++VE K+A P+
Sbjct: 192 EDMVEKVFEQSQHEIKGKIVEVKKAEPK 219
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
S P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+T+ +
Sbjct: 11 STADSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVD 70
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREY 126
VD ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++Y
Sbjct: 71 QAGVDKVLAQTRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQY 128
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
F QFG ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 129 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 167
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
>gi|148230364|ref|NP_001091533.1| heterogeneous nuclear ribonucleoprotein D0 [Bos taurus]
gi|146231918|gb|ABQ13034.1| heterogeneous nuclear ribonucleoprotein D [Bos taurus]
gi|296486390|tpg|DAA28503.1| TPA: heterogeneous nuclear ribonucleoprotein D [Bos taurus]
Length = 306
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|395834191|ref|XP_003790095.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Otolemur garnettii]
Length = 306
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 12/178 (6%)
Query: 6 DDSKCTEPESLR----KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
D+S P +L K+FIGGL++ TT+E L ++F ++GEI+D +MKD T RSRGFG
Sbjct: 148 DNSSKMAPSNLGRDSGKMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFG 207
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EE 120
F+T+ + + VD+ + + H +DG++++ KRA+ R+E K V K+FVGG+ E
Sbjct: 208 FLTFKDPRAVDEVIK-KDHILDGKLIDPKRAIAREEQDK------VGKIFVGGIDPLVNE 260
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
D ++FSQFG I ++ +K+TG RGF FI ++ + VD++ ++K L + +E
Sbjct: 261 RDFNDFFSQFGHIIDAQLMIDKDTGRSRGFGFITYDSPEAVDRVCVNKYLTLKGKAME 318
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + + K+F+GG+D + FF Q+G I+D +M D T RSRGFGFITY + V
Sbjct: 242 EQDKVGKIFVGGIDPLVNERDFNDFFSQFGHIIDAQLMIDKDTGRSRGFGFITYDSPEAV 301
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
D N+ + G+ +E KRA PR
Sbjct: 302 DRVCVNKYLTLKGKAMEVKRAEPR 325
>gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Homo sapiens]
gi|114594009|ref|XP_001143722.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pan troglodytes]
gi|395735083|ref|XP_003776519.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pongo abelii]
gi|402869389|ref|XP_003898745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Papio anubis]
gi|870745|dbj|BAA09523.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815613|gb|AAC23475.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|18645125|gb|AAH23977.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|19683928|gb|AAH26015.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|119626282|gb|EAX05877.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626286|gb|EAX05881.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626287|gb|EAX05882.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|208966456|dbj|BAG73242.1| heterogeneous nuclear ribonucleoprotein D [synthetic construct]
gi|380783617|gb|AFE63684.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|383417963|gb|AFH32195.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|384940050|gb|AFI33630.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|410265342|gb|JAA20637.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
gi|410292488|gb|JAA24844.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 306
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|410351151|gb|JAA42179.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 307
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 85 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 143
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 144 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 197
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 198 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 244
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 180 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 239
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 240 IMEKKYHNVGLSKCEIKVAMSKE 262
>gi|119626284|gb|EAX05879.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_f [Homo sapiens]
Length = 277
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 55 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 113
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 114 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 167
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 168 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 214
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 150 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 209
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 210 IMEKKYHNVGLSKCEIKVAMSKE 232
>gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Length = 298
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 76 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 134
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 135 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 188
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 189 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 235
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 171 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 230
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 231 IMEKKYHNVGLSKCEIKVAMSKE 253
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G +V++ +MKD T RSRGFGF+T+ A VD+ +
Sbjct: 165 KMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTFENASSVDEVVKT 224
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + E+F+Q+GTI
Sbjct: 225 Q-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGADVRPKEFEEFFAQYGTIIDA 277
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ SK +++E
Sbjct: 278 QLMLDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIE 319
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF Q+G I+D +M D T RSRGFGF+TY VD +
Sbjct: 249 KIFVGGIGADVRPKEFEEFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQS 308
Query: 78 RPHNIDGRVVETKRAVPRD 96
+ G+ +E KRA PR+
Sbjct: 309 KYIEFKGKQIEIKRAEPRN 327
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 75 DKVLAQTRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 167
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPAGSA 196
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 16/175 (9%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANAT-------------VKKMFVGGLKDQ-EEDDL 123
+PHN+DGR ++ K PR +PE + T KK+FVGG+ E +L
Sbjct: 72 KPHNLDGRNIDPKPCTPRGM--QPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPEL 129
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YF++FG + V M+ + E RGF FI F VD+ V ++ ++VE
Sbjct: 130 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVE 184
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFGFIT+ + VD A++
Sbjct: 113 KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 77 NRPHNIDGRVVETKRAVPRDE 97
H+I G+ VE K+A PRD
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDS 193
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 102/164 (62%), Gaps = 8/164 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 177 PRHTEAAAAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 235
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 236 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 289
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+REYF FG +ES+ + + +T +RGF FI F + + V KI+
Sbjct: 290 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 333
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 272 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 331
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 332 IMEKKYHNVGLSKCEIKVAMSKE 354
>gi|395542043|ref|XP_003772944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Sarcophilus
harrisii]
Length = 306
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 35 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 93
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 94 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 147
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 148 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 194
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 130 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 189
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 190 IMEKKYHNVGLSKCEIKVAMSKE 212
>gi|25513662|pir||F89530 protein H28G03.1 [imported] - Caenorhabditis elegans
Length = 336
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 97/162 (59%), Gaps = 14/162 (8%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P LRK+FIGGL + TTDE L +F QWG +VD +V++DP TK SRGFGF+T++ +
Sbjct: 66 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 125
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGK--PEA-----NATVKKMFVGGLKD--QEEDDL 123
AM++RPH + G+ V++KRA+PR+++ P A K+ + G+ + D L
Sbjct: 126 SAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSL 185
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
R YF FGT++ V ++ G RG F+ + D + D+ +
Sbjct: 186 RVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+TY++ V
Sbjct: 17 SPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+ ++ H +D + ++ K A PR +P+ KK+FVGGL + +D++ YF QF
Sbjct: 77 EKVLAQNRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQF 134
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 135 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 169
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 171 IHFHEINNKMVECKKAQPK-EVMTPTGSA 198
>gi|148878011|gb|AAI46039.1| HNRNPD protein [Bos taurus]
Length = 355
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Query: 6 DDSKCTEPESLR---KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
S + P+S K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF
Sbjct: 6 SQSGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGF 65
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+T+ + VD ++ H +D + ++ K A PR +P+ KK+FVGGL + +
Sbjct: 66 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVE 123
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
D+++YF QFG ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 124 DVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVC 167
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P ++A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTSSA 196
>gi|432112552|gb|ELK35268.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 168
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 71/92 (77%)
Query: 5 YDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
Y + EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+T
Sbjct: 61 YAGASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT 120
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
Y+ + VD AM+ RPH +DGRVVE KRAV R+
Sbjct: 121 YATVEEVDAAMNARPHKVDGRVVEPKRAVSRE 152
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 99 GKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 157
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ +
Sbjct: 64 ASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 123
Query: 158 YDVVD 162
+ VD
Sbjct: 124 VEEVD 128
>gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Homo sapiens]
gi|386782249|ref|NP_001247736.1| heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|114594005|ref|XP_001143807.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pan troglodytes]
gi|297673867|ref|XP_002814969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Pongo abelii]
gi|402869391|ref|XP_003898746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Papio anubis]
gi|13124489|sp|Q14103.1|HNRPD_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|870749|dbj|BAA09525.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815612|gb|AAC23474.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|12803191|gb|AAH02401.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|63990762|gb|AAY40913.1| unknown [Homo sapiens]
gi|119626280|gb|EAX05875.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|119626281|gb|EAX05876.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|123982850|gb|ABM83166.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|123997529|gb|ABM86366.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|355687289|gb|EHH25873.1| Heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|380783619|gb|AFE63685.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|383417965|gb|AFH32196.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|384940052|gb|AFI33631.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
Length = 355
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|410351149|gb|JAA42178.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 356
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 85 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 143
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 144 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 197
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 198 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 244
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 180 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 239
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 240 IMEKKYHNVGLSKCEIKVAMSKE 262
>gi|397524667|ref|XP_003832310.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Pan paniscus]
Length = 355
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 8/157 (5%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+FIGGL++ TT++SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 87 RKMFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNIVMV 146
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIES 135
+ H +DG++++ KRA+PR+E K+FVGG+ ++ E+D +F QFG +
Sbjct: 147 -KEHYLDGKIIDPKRAIPREE------QERTSKIFVGGVSQEATEEDFTAFFKQFGRVVD 199
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +KETG RGF F+ F+ VD + + +L
Sbjct: 200 ATLMMDKETGRPRGFGFVTFDGDAAVDATLKGPLQIL 236
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T+E AFF+Q+G +VD +M D
Sbjct: 146 VKEHYLDGKIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTAFFKQFGRVVDATLMMD 205
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T R RGFGF+T+ VD + P I G+ +E KRA PR
Sbjct: 206 KETGRPRGFGFVTFDGDAAVDATLKG-PLQILGKPIEVKRAQPR 248
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
V A + P N+ VE A + + AN+ +KMF+GGL + ED L+ YF+Q
Sbjct: 50 VQSANISIPANLMRSHVEKCFAYNHVPLNQVNANSQCRKMFIGGLNWETTEDSLKGYFTQ 109
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
FG + ++ + TG RGF F+ F D V+ +++ +
Sbjct: 110 FGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNIVMVKE 148
>gi|74001715|ref|XP_857957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 11
[Canis lupus familiaris]
Length = 355
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|395834193|ref|XP_003790096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Otolemur garnettii]
Length = 355
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|25147054|ref|NP_741785.1| Protein H28G03.1, isoform b [Caenorhabditis elegans]
gi|351064183|emb|CCD72472.1| Protein H28G03.1, isoform b [Caenorhabditis elegans]
Length = 315
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 105/177 (59%), Gaps = 16/177 (9%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P LRK+FIGGL + TTDE L +F QWG +VD +V++DP TK SRGFGF+T++ +
Sbjct: 45 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 104
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGK--PEA-----NATVKKMFVGGLKD--QEEDDL 123
AM++RPH + G+ V++KRA+PR+++ P A K+ + G+ + D L
Sbjct: 105 SAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSL 164
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL--SKITLLLDRRVE 178
R YF FGT++ V ++ G RG F+ + D + D+ + S ++ +R++E
Sbjct: 165 RVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 216
>gi|322798126|gb|EFZ19965.1| hypothetical protein SINV_80273 [Solenopsis invicta]
Length = 370
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 108/177 (61%), Gaps = 19/177 (10%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITK---------------RSRGFGF 62
K+F+GGL ++T+ E L+ +F +G + DV++MKDP+T+ RSRGFGF
Sbjct: 41 KLFVGGLSWQTSSEKLREYFSMFGTVTDVLIMKDPMTQTVLVHRAGSRLVRLQRSRGFGF 100
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEED 121
IT++E VD + H +DG+ ++ K A P++ +AN T KK+FVGG+ +D D
Sbjct: 101 ITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNR--AKQANRT-KKIFVGGVSQDTSSD 157
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+++ YF+QFG +E M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 158 EVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 214
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ + ++A+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 143 KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 202
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
H I + VE K+A P++ + +P A A K++ +G L
Sbjct: 203 IHFHTIKNKKVECKKAQPKEAV-QPGALALGKRVVLGAL 240
>gi|116256512|ref|NP_001070733.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Mus musculus]
gi|33516945|sp|Q60668.2|HNRPD_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|148688367|gb|EDL20314.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Mus
musculus]
Length = 355
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHTEAAAAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 16/175 (9%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANAT-------------VKKMFVGGLKDQ-EEDDL 123
+PHN+DGR ++ K PR +PE + T KK+FVGG+ E +L
Sbjct: 72 KPHNLDGRNIDPKPCTPRGM--QPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPEL 129
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YF++FG + V M+ + E RGF FI F VD+ V ++ ++VE
Sbjct: 130 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVE 184
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFGFIT+ + VD A++
Sbjct: 113 KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 77 NRPHNIDGRVVETKRAVPRDE 97
H+I G+ VE K+A PRD
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDS 193
>gi|410957357|ref|XP_003985295.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Felis catus]
Length = 290
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 19 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 77
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 78 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 131
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 132 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 178
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 114 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 173
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 174 IMEKKYHNVGLSKCEIKVAMSKE 196
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 104/168 (61%), Gaps = 3/168 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+TY++ V
Sbjct: 17 SPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+ ++ H +D + ++ K A PR +P+ KK+FVGGL + +D++ YF QF
Sbjct: 77 EKVLAQNRHELDSKTIDPKVAFPRRA--QPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQF 134
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G ++ ++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 135 GKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 182
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 171 IHFHEINNKMVECKKAQPK-EVMTPTGSA 198
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 20 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 78
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 79 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 132
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 133 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 179
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 115 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 174
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 175 IMEKKYHNVGLSKCEIKVAMSKE 197
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 102/164 (62%), Gaps = 8/164 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 150 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 208
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 209 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 262
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+REYF FG +ES+ + + +T +RGF FI F + + V KI+
Sbjct: 263 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 306
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 245 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 304
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 305 IMEKKYHNVGLSKCEIKVAMSKE 327
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Query: 6 DDSKCTEPESLR---KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
S + P+S K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF
Sbjct: 6 SQSGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGF 65
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+T+ + VD ++ H +D + ++ K A PR +P+ KK+FVGGL + +
Sbjct: 66 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVE 123
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
D+++YF QFG ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 124 DVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVC 167
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P ++A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTSSA 196
>gi|440898655|gb|ELR50103.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Bos grunniens
mutus]
Length = 277
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 6 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 64
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 65 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 118
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 119 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 165
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 101 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 160
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 161 IMEKKYHNVGLSKCEIKVAMSKE 183
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D++ YF QF
Sbjct: 75 DKVLAQSRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 167
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF
Sbjct: 5 APQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|332233349|ref|XP_003265864.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Nomascus leucogenys]
Length = 355
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|211826253|gb|AAH11172.2| Hnrnpd protein [Mus musculus]
Length = 351
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 80 PRHTEAAAAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 138
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 139 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 192
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 193 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 239
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 175 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 234
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 235 IMEKKYHNVGLSKCEIKVAMSKE 257
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Query: 6 DDSKCTEPESLR---KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
S + P+S K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF
Sbjct: 6 SQSGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGF 65
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+T+ + VD ++ H +D + ++ K A PR +P+ KK+FVGGL + +
Sbjct: 66 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVE 123
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
D+++YF QFG ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 124 DVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVC 167
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P ++A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTSSA 196
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 103/161 (63%), Gaps = 9/161 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +++F QFG +
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEANEQDFKQFFMQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 114 LMIDKDTGRPRGFGFVTF-DSEAAVEAALSRPLEILGKPIE 153
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ ++ + FF Q+G +VD +M D
Sbjct: 58 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID 117
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ A+S RP I G+ +E K+A PR +
Sbjct: 118 KDTGRPRGFGFVTFDSEAAVEAALS-RPLEILGKPIEVKKAQPRGNL 163
>gi|403263350|ref|XP_003924000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Saimiri boliviensis boliviensis]
Length = 306
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|444723247|gb|ELW63906.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Tupaia
chinensis]
Length = 296
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 37 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 95
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 96 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 149
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 150 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 196
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 132 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 191
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 192 IMEKKYHNVGLSKCEIKVAMSKE 214
>gi|298713788|emb|CBJ27160.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 380
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 109/218 (50%), Gaps = 57/218 (26%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TTDE+L+ +FEQ+G + D +VMKD +++RSRGFGFITY + VD A+S
Sbjct: 10 KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMNSASVDAALSV 69
Query: 78 RPHNIDGRVVETKRAVPRDEI--------------------------------------- 98
+ H +D R VE KRAVPR E+
Sbjct: 70 KQHIVDNRRVEAKRAVPRSEVPPKVEPQQQLAQSPSLQSQNSWDTPFAMESYALRGVTPE 129
Query: 99 GKPEANATVK-----------------KMFVGGLKDQEED-DLREYFSQFGTIESVNMVT 140
G+ +N+TV K+FVGGL + D L+ YF QFG +++ ++
Sbjct: 130 GRTRSNSTVSASSMGGLITLDGVPMATKIFVGGLHYETRDASLQAYFEQFGPVQTAEVMF 189
Query: 141 NKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
N+ET RGF F+ F + + ++ S + + VE
Sbjct: 190 NRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVE 227
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL Y T D SLQA+FEQ+G + VM + T +SRGFGF+ + + + + +
Sbjct: 157 KIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQS 216
Query: 78 RPHNIDGRVVETKRAVPRDE 97
H ++G+VVE KRAVPR +
Sbjct: 217 SHHTVNGKVVEVKRAVPRAQ 236
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 16/176 (9%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+ + T++E L+ +F ++GE+V V+MKD +T R+RGFGF+ +S+ +VD A+
Sbjct: 7 KIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIVDIALQE 66
Query: 78 RPHNIDGRVVETKRAVPR--------------DEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ H IDGR VE K+AVPR D G + KK+FVGGL + E+D
Sbjct: 67 K-HTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYGGGSVRTKKIFVGGLPANLTEED 125
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+ YF QFG I V ++ + T RGF FI F+ D V+ ++ L ++ VE
Sbjct: 126 FKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQKSFHQLNEKLVE 181
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 6 DDSKCTEPESLR--KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+DS+ S+R K+F+GGL T+E + +F+Q+G I DVVVM D T+R RGFGFI
Sbjct: 97 NDSQGYGGGSVRTKKIFVGGLPANLTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFI 156
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
++ V+ + H ++ ++VE KRA+P+D
Sbjct: 157 SFDSEDAVESVLQKSFHQLNEKLVEVKRALPKD 189
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 97/149 (65%), Gaps = 3/149 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD ++
Sbjct: 25 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 84
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 85 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDA 142
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F D+V+K+
Sbjct: 143 MLMFDKTTNRHRGFGFVTFESEDIVEKVC 171
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 113 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 172
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 173 IHFHEINNKMVECKKAQPK-EVMSPTGSA 200
>gi|334330945|ref|XP_001364005.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Monodelphis domestica]
Length = 376
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 105 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 163
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 164 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 217
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 218 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 264
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 200 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 259
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 260 IMEKKYHNVGLSKCEIKVAMSKE 282
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 97/149 (65%), Gaps = 3/149 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD ++
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDA 138
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F D+V+K+
Sbjct: 139 MLMFDKTTNRHRGFGFVTFESEDIVEKVC 167
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF
Sbjct: 5 APQPGLASPDSPYDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D++ YF QF
Sbjct: 75 DKVLAQSRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 133 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 167
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF
Sbjct: 5 APQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|358396002|gb|EHK45389.1| hypothetical protein TRIATDRAFT_131648 [Trichoderma atroviride IMI
206040]
Length = 405
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 99/148 (66%), Gaps = 8/148 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D + RSRGFGF+T+ +AK V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTVNIVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ +D + + REYF+QFG +
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQDTTDQEFREYFAQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K+TG RGF F+ F VD +
Sbjct: 114 LMMDKDTGRPRGFGFVTFESEAGVDACI 141
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ TTD+ + +F Q+G +VD +M D T R RGFGF+T+ E++
Sbjct: 78 EQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF-ESEAG 136
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
DA N P I G+ +E K+A PR +
Sbjct: 137 VDACINVPLEIHGKPIEVKKAQPRGNL 163
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 110 MFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
MF+GGL + D LR+YFSQFG + ++ + +G RGF F+ F D V+ IV+ K
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTVN-IVMVK 59
Query: 169 ITLL 172
L
Sbjct: 60 EHFL 63
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 102/156 (65%), Gaps = 8/156 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTVMV- 161
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H++DG++++ KRA+PRDE K+FVGG+ +D E D +F +FG +
Sbjct: 162 KEHSLDGKLIDPKRAIPRDE------QERTAKIFVGGVSQDATEQDFEAFFQKFGRVLDA 215
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +K+TG RGF F+ F++ V++ + + +L
Sbjct: 216 TLMMDKDTGRPRGFGFVTFDNEMAVERTLEGPLAIL 251
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T++ +AFF+++G ++D +M D T R RGFGF+T+ V
Sbjct: 181 EQERTAKIFVGGVSQDATEQDFEAFFQKFGRVLDATLMMDKDTGRPRGFGFVTFDNEMAV 240
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ + P I G+ +E KRA PR ++
Sbjct: 241 ERTLEG-PLAILGKPIEVKRAQPRGKM 266
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 103/162 (63%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+E+L+ +F ++G + D+ +MKD T RSRGFGF+T+ VD+ +
Sbjct: 95 KMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEVVKT 154
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KR++PR+E K K+FVGG+ D + E+FSQ+G I
Sbjct: 155 Q-HILDGKVIDPKRSIPREEQDK------TGKIFVGGIGADVRPKEFEEFFSQYGNIIDA 207
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ SK +++E
Sbjct: 208 QLMLDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIE 249
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF Q+G I+D +M D T RSRGFGF+TY VD +
Sbjct: 179 KIFVGGIGADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQS 238
Query: 78 RPHNIDGRVVETKRAVPR 95
+ G+ +E KRA PR
Sbjct: 239 KYIEFKGKQIEIKRAQPR 256
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Query: 6 DDSKCTEPESLR---KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
S + P+S K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF
Sbjct: 6 SQSGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGF 65
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+T+ + VD ++ H +D + ++ K A PR +P+ KK+FVGGL + +
Sbjct: 66 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVE 123
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
D+++YF QFG ++ ++ +K T RGF F+ F D+V+K+
Sbjct: 124 DVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVC 167
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P ++A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTSSA 196
>gi|348523119|ref|XP_003449071.1| PREDICTED: DAZ-associated protein 1-like [Oreochromis niloticus]
Length = 435
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 16/175 (9%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANAT-------------VKKMFVGGLKDQ-EEDDL 123
+PHN+DGR ++ K PR +PE + T KK+FVGG+ E +L
Sbjct: 72 KPHNLDGRNIDPKPCTPRGM--QPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPEL 129
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YF++FG + V M+ + E RGF FI F VD+ V ++ ++VE
Sbjct: 130 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVE 184
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFGFIT+ + VD A++
Sbjct: 113 KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 172
Query: 77 NRPHNIDGRVVETKRAVPRDE 97
H+I G+ VE K+A PRD
Sbjct: 173 MHFHDIMGKKVEVKKAEPRDS 193
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 104/161 (64%), Gaps = 9/161 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ +AK V+ M +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K+FVGG+ +D E D +++F QFG +
Sbjct: 60 EHYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQDATEQDFKKFFMQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 114 LMIDKDTGRPRGFGFVTF-DSEAAVEACLSQPLEILGKPIE 153
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + FF Q+G +VD +M D
Sbjct: 58 VKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQDATEQDFKKFFMQFGRVVDATLMID 117
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ +S +P I G+ +E K+A PR +
Sbjct: 118 KDTGRPRGFGFVTFDSEAAVEACLS-QPLEILGKPIEVKKAQPRGNM 163
>gi|432858970|ref|XP_004069029.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oryzias
latipes]
Length = 299
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+TY++ V+ ++
Sbjct: 1 MFIGGLSWQTTQEGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQVLAQN 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 61 RHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F + DVV+K+
Sbjct: 119 LMFDKTTNRHRGFGFVTFENEDVVEKVC 146
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 148 IHFHEINNKMVECKKAQPK-EVMTPTGSA 175
>gi|410292486|gb|JAA24843.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 355
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|355765936|gb|EHH62474.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Macaca
fascicularis]
Length = 302
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 31 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 89
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 90 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 143
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 144 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 190
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 126 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 185
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 186 IMEKKYHNVGLSKCEIKVAMSKE 208
>gi|403263352|ref|XP_003924001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Saimiri boliviensis boliviensis]
Length = 355
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|71896513|ref|NP_001025523.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus (Silurana)
tropicalis]
gi|52355236|gb|AAU44811.1| AUF1 [Xenopus (Silurana) tropicalis]
Length = 295
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 27 KIDASKTEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 84
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 85 LFKESEGVDKVMEQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 138
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG IE++ + + +T +RGF FI F + D V KI+ K
Sbjct: 139 IREYFGTFGEIEAIELPMDNKTNKRRGFCFITFKEEDPVKKIMEKK 184
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GEI + + D T + RGF FIT+ E V
Sbjct: 120 EPVKKIFVGGLSPDTPEEKIREYFGTFGEIEAIELPMDNKTNKRRGFCFITFKEEDPVKK 179
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 180 IMEKKYHNVGLSKCEIKVALSKE 202
>gi|354497793|ref|XP_003511003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Cricetulus griseus]
Length = 286
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 15 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 73
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 74 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 127
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 128 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 174
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 110 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 169
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 170 IMEKKYHNVGLSKCEIKVAMSKE 192
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 104/168 (61%), Gaps = 9/168 (5%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
+PE LRK+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + EA V
Sbjct: 208 QPE-LRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASV 266
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQF 130
D + + H +DGRV++ K+A+ + VKK+FVGGL + ED +R+YF +F
Sbjct: 267 DKVLDQKEHRLDGRVIDPKKAMAMKK-------DPVKKIFVGGLNPEATEDKIRDYFGEF 319
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G IE++ + + +T +RGF FI F + + V KI+ K + + E
Sbjct: 320 GEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCE 367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 51/83 (61%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T++ ++ +F ++GEI + + DP T + RGF FIT+ E + V
Sbjct: 293 DPVKKIFVGGLNPEATEDKIRDYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKK 352
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + HN+ G E K A P++
Sbjct: 353 ILEKKFHNVSGSKCEIKVAQPKE 375
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 100 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
+P ++KMFVGGL D + DL++YF++FG + + + TG RGF FI F +
Sbjct: 204 RPRKQPELRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEA 263
Query: 159 DVVDKIVLSKITLLLDRRV 177
VDK VL + LD RV
Sbjct: 264 ASVDK-VLDQKEHRLDGRV 281
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 106/168 (63%), Gaps = 8/168 (4%)
Query: 1 MKPRYDD--SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSR 58
+ P +D S C +P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP TKR+R
Sbjct: 29 LSPASEDGSSGCNDPG---KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRAR 85
Query: 59 GFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ 118
GFGFIT+++ V+ +++ H +DG+ ++ K A P+ +P+ KK+F+GGL
Sbjct: 86 GFGFITFADPASVEKVLAHDQHELDGKKIDPKVAFPKR--AQPKMIIKTKKVFIGGLSAT 143
Query: 119 EE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+D+R YF Q+G +E ++ +K T RGF FI F++ DV DK+
Sbjct: 144 STLEDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVC 191
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 7/127 (5%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+KVFIGGL +T E ++ +FEQ+G++ D ++M D T+R RGFGFIT+ + D
Sbjct: 133 KKVFIGGLSATSTLEDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 192
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEAN----ATVKKMFVGGLKDQEEDDLREYFSQFGT 132
H I+G++VE K+A P++ + + N A + ++ GL ++ Y + GT
Sbjct: 193 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLY--GLGPEQLLAYASYLPRLGT 250
Query: 133 IESVNMV 139
NM+
Sbjct: 251 Y-GANML 256
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 88 ETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGA 146
ET + P E G N KMF+GGL Q + LR+YF +FG + ++ + T
Sbjct: 25 ETTQLSPASEDGSSGCN-DPGKMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKR 83
Query: 147 KRGFAFIEFNDYDVVDKIV 165
RGF FI F D V+K++
Sbjct: 84 ARGFGFITFADPASVEKVL 102
>gi|296196172|ref|XP_002745745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Callithrix jacchus]
Length = 325
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 54 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 112
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 113 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 166
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 167 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 213
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 149 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 208
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 209 IMEKKYHNVGLSKCEIKVAMSKE 231
>gi|351695030|gb|EHA97948.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Heterocephalus
glaber]
Length = 277
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 6 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 64
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 65 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 118
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 119 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 165
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 101 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 160
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 161 IMEKKYHNVGLSKCEIKVAMSKE 183
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD ++
Sbjct: 21 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 80
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 81 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 138
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 139 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 180
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMFPP 193
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D + +SL K+F+GG+ + TT+ES FE++G I D V+MKD TK RGFGF+T+
Sbjct: 44 EDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 103
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
S+ ++D + + H IDGR VE KR VPR+E+ + T +K+F+GGL ED+L+
Sbjct: 104 SDPSVIDKVLED-DHVIDGRTVEVKRTVPREEMITKDGPKT-RKIFIGGLPPSLTEDELK 161
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++FS +G + ++ + TG RGF FI F D V++++
Sbjct: 162 DHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVI 202
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+FIGGL T++ L+ F +G +V+ +M D T RSRGFGFIT+ V+ +S
Sbjct: 144 RKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVIS 203
Query: 77 -NRPHNIDGRVVETKRAVPR 95
R ++ G+ VE K+A P+
Sbjct: 204 EGRMRDLGGKQVEIKKAEPK 223
>gi|367025853|ref|XP_003662211.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
gi|347009479|gb|AEO56966.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 100/154 (64%), Gaps = 8/154 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ + D + REYF+QFG +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDHEFREYFAQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F V+ + + + +
Sbjct: 114 LMMDKDTGRPRGFGFVTFESEAGVEACLAANLEI 147
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD + +F Q+G +VD +M D
Sbjct: 58 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMD 117
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ ++ I G+ +E K+A PR +
Sbjct: 118 KDTGRPRGFGFVTFESEAGVEACLAAN-LEIHGKPIEVKKAQPRGNL 163
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 98/149 (65%), Gaps = 3/149 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 78 PHHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 135
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F + DVV+K+
Sbjct: 136 MLMFDKTTNRHRGFGFVTFENEDVVEKVC 164
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPP 190
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 108/164 (65%), Gaps = 8/164 (4%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+FIGGL++ TT+++L+ +F ++G + +V +M+D T RSRGFGF+++++A VD+ +
Sbjct: 170 INKMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSVDEVV 229
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIE 134
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + E+FS++G+I
Sbjct: 230 KTQ-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGPDVRPKEFEEFFSEWGSII 282
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VD++ +K +R+E
Sbjct: 283 DAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQNKFIEFKGKRIE 326
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF +WG I+D +M D T RSRGFGFITY VD N
Sbjct: 256 KIFVGGIGPDVRPKEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQN 315
Query: 78 RPHNIDGRVVETKRAVPR 95
+ G+ +E KRA PR
Sbjct: 316 KFIEFKGKRIEIKRAEPR 333
>gi|341874087|gb|EGT30022.1| hypothetical protein CAEBREN_23175 [Caenorhabditis brenneri]
Length = 335
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 96/162 (59%), Gaps = 14/162 (8%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P LRK+FIGGL + TTDE L +F QWG +VD +V++DP TK SRGFGF+T++ +
Sbjct: 66 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 125
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGK--PEA-----NATVKKMFVGGLKD--QEEDDL 123
AM++RPH + G+ V++KRA+PR+++ P A K+ + G+ D L
Sbjct: 126 SAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITHGVHSVDSL 185
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
R YF FGT++ V ++ G RG F+ + D + D+ +
Sbjct: 186 RVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/165 (36%), Positives = 104/165 (63%), Gaps = 8/165 (4%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+C ++ K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ +
Sbjct: 146 ECISDDAPDKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDP 205
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYF 127
K V+ M + H +DG++++ KRA+PRDE K+FVGG+ ++ E D +++F
Sbjct: 206 KTVNTVMV-KEHYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQEATEQDFKQFF 258
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
QFG + ++ +K++G RGF F+ F+ V+ + + +L
Sbjct: 259 MQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL 303
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + FF Q+G +VD +M D
Sbjct: 213 VKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMID 272
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ R RGFGF+T+ V+ +S P I G+ +E K+A PR
Sbjct: 273 KDSGRPRGFGFVTFDSEAAVEATLSG-PLEILGKPIEVKKAQPR 315
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT++ L+ +F ++G ++++ +MKD T RSRGFGF+T+ VD+ +
Sbjct: 198 KMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFEHPSSVDEVVKT 257
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KR++P++E K + K+FVGG+ D + E+F+QFGTI
Sbjct: 258 Q-HILDGKVIDPKRSIPKEEQDK------IGKIFVGGIGTDVRPKEFEEFFAQFGTIIDA 310
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VDK+ +K +++E
Sbjct: 311 QLMLDKDTGRSRGFGFITYDSADAVDKVCQNKYIDFKGKQIE 352
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + + K+F+GG+ + + FF Q+G I+D +M D T RSRGFGFITY A V
Sbjct: 276 EQDKIGKIFVGGIGTDVRPKEFEEFFAQFGTIIDAQLMLDKDTGRSRGFGFITYDSADAV 335
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFV 112
D N+ + G+ +E KRA R GKP A+A+ +M
Sbjct: 336 DKVCQNKYIDFKGKQIEVKRAQQRHSHGKP-ADASNSQMLT 375
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 103/156 (66%), Gaps = 8/156 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTDESL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 104 KMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVMV- 162
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H++DG++++ KRA+PRDE K+FVGG+ ++ E D +++F +FG +
Sbjct: 163 KEHSLDGKLIDPKRAIPRDE------QERTAKIFVGGVSQEATEADFKDFFMKFGRVLDA 216
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +K+TG RGF F+ F+ V++ + + +L
Sbjct: 217 TLMMDKDTGRPRGFGFVTFDSELAVERTLEGPLAIL 252
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T+ + FF ++G ++D +M D T R RGFGF+T+ V
Sbjct: 182 EQERTAKIFVGGVSQEATEADFKDFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDSELAV 241
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEA 103
+ + P I G+ +E KRA PR ++G+ EA
Sbjct: 242 ERTLEG-PLAILGKPIEVKRAQPRGKMGEEEA 272
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 108/162 (66%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+E+L+ +F ++G++V++ +MKD T RSRGFGF+T+ +A VD+ +
Sbjct: 157 KMFIGGLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLTFEDATSVDEVVKT 216
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + ++F+Q+GTI
Sbjct: 217 Q-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGADVRPKEFEDFFAQYGTIIDA 269
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K +++E
Sbjct: 270 QLMLDKDTGRSRGFGFVTYDSPDAVDRVCQNKFIEFKGKQIE 311
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF Q+G I+D +M D T RSRGFGF+TY VD N
Sbjct: 241 KIFVGGIGADVRPKEFEDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQN 300
Query: 78 RPHNIDGRVVETKRAVPR 95
+ G+ +E KRA PR
Sbjct: 301 KFIEFKGKQIEIKRAEPR 318
>gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Length = 358
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 102/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKGEEPVKKIMEKK 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKGEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D + +SL K+F+GG+ + TT+ES FE++G I D V+MKD TK RGFGF+T+
Sbjct: 103 EDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 162
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
S+ ++D + + H IDGR VE KR VPR+E+ + T +K+F+GGL ED+L+
Sbjct: 163 SDPSVIDKVLED-DHVIDGRTVEVKRTVPREEMITKDGPKT-RKIFIGGLPPSLTEDELK 220
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++FS +G + ++ + TG RGF FI F D V++++
Sbjct: 221 DHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVI 261
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+FIGGL T++ L+ F +G +V+ +M D T RSRGFGFIT+ V+ +S
Sbjct: 203 RKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVIS 262
Query: 77 -NRPHNIDGRVVETKRAVPR 95
R ++ G+ VE K+A P+
Sbjct: 263 EGRMRDLGGKQVEIKKAEPK 282
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGFIT+++ VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSASTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + D+V+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMVE 181
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARSL 203
>gi|150866885|ref|XP_001386627.2| hypothetical protein PICST_68431 [Scheffersomyces stipitis CBS
6054]
gi|149388141|gb|ABN68598.2| nuclear polyadenylated RNA-binding protein 4 [Scheffersomyces
stipitis CBS 6054]
Length = 481
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+E L ++F ++GE+VD +MKD T +SRGFGF+T+ + K VD+ +
Sbjct: 161 KMFIGGLNWDTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKSVDEVIKT 220
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
H +DG++++ KRA+ R+E K V K+FVGG+ E + ++FSQFG+I
Sbjct: 221 D-HILDGKLIDPKRAIAREEQDK------VGKIFVGGIDPMVNEKEFHDFFSQFGSIIDA 273
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K++G RGF FI F+ D VD++ ++K L + +E
Sbjct: 274 QLMIDKDSGRSRGFGFITFDSPDAVDRVTVNKFLTLKGKAME 315
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + + K+F+GG+D ++ FF Q+G I+D +M D + RSRGFGFIT+ V
Sbjct: 239 EQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDSGRSRGFGFITFDSPDAV 298
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
D N+ + G+ +E KRA PR
Sbjct: 299 DRVTVNKFLTLKGKAMEVKRAEPR 322
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 102/161 (63%), Gaps = 9/161 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ ++ E D + +F QFG +
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEANEQDFKSFFMQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 114 LMIDKDTGRPRGFGFVTF-DSEAAVEAALSRPLEILGKPIE 153
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ ++ ++FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEANEQDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ A+S RP I G+ +E K+A PR +
Sbjct: 138 EAALS-RPLEILGKPIEVKKAQPRGNL 163
>gi|148227150|ref|NP_001088992.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus laevis]
gi|52082714|gb|AAU25946.1| p37 AUF1 [Xenopus laevis]
Length = 295
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 101/166 (60%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 27 KIDASKTEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 84
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D ED
Sbjct: 85 LFKESEGVDKVMEQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEDK 138
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +E++ + + +T +RGF FI F + D V I+ K
Sbjct: 139 IREYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEEDPVKNIMEKK 184
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E V +
Sbjct: 120 EPVKKIFVGGLSPDTPEDKIREYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEEDPVKN 179
Query: 74 AMSNRPHNIDGRVVETKRAV 93
M + HN+ E K A+
Sbjct: 180 IMEKKYHNVGLSKCEIKVAL 199
>gi|85101893|ref|XP_961230.1| hypothetical protein NCU04239 [Neurospora crassa OR74A]
gi|11595517|emb|CAC18311.1| related to heterogeneous nuclear ribonucleoprotein [Neurospora
crassa]
gi|28922772|gb|EAA31994.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 503
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 100/154 (64%), Gaps = 8/154 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ + D + REYF+QFG +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDHEFREYFAQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F V+ + + + +
Sbjct: 114 LMMDKDTGRPRGFGFVTFESEAGVEACLSANLEI 147
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD + +F Q+G +VD +M D
Sbjct: 58 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMD 117
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ +S I G+ +E K+A PR +
Sbjct: 118 KDTGRPRGFGFVTFESEAGVEACLSAN-LEIHGKPIEVKKAQPRGNL 163
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 107/173 (61%), Gaps = 8/173 (4%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
+ P+ + + T + K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGF
Sbjct: 96 ISPQQPEPQGTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGF 155
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQE 119
GF+T+ + K V+ M + H +DG++++ KRA+PRDE K+FVGG+ +D
Sbjct: 156 GFLTFKDPKTVNTVMV-KEHYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQDAN 208
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
E D +++F QFG + ++ +K+TG RGF F+ F+ V+ + + +L
Sbjct: 209 EQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL 261
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 27/133 (20%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ ++ + FF Q+G +VD +M D
Sbjct: 171 VKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMID 230
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMF 111
T R RGFGF+T+ V+ +S +P I G+ +E K+A PR
Sbjct: 231 KDTGRPRGFGFVTFDSEAAVEACLS-QPLEILGKPIEVKKAQPR---------------- 273
Query: 112 VGGLKDQEEDDLR 124
G L+D+++ LR
Sbjct: 274 -GNLRDEDDRRLR 285
>gi|66911597|gb|AAH97855.1| LOC496375 protein [Xenopus laevis]
Length = 286
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 101/166 (60%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 18 KIDASKTEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 75
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D ED
Sbjct: 76 LFKESEGVDKVMEQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEDK 129
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +E++ + + +T +RGF FI F + D V I+ K
Sbjct: 130 IREYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEEDPVKNIMEKK 175
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E V +
Sbjct: 111 EPVKKIFVGGLSPDTPEDKIREYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEEDPVKN 170
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 171 IMEKKYHNVGLSKCEIKVALSKE 193
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E+ +K+FIGGL TT E+L+ +F+ +G+I DV+++KDP+TKRSRGFGF+T+ E ++
Sbjct: 14 ETNKKLFIGGLSPNTTLETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEK 73
Query: 74 AMSNRPHNIDGRVVETKRAVPR--DEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQF 130
+ N PH +D + ++ K A+P+ D + K +K+F+GGL + DL +F ++
Sbjct: 74 ILLNSPHFLDSKKIDPKIAIPKKPDLVDKSINTEKTRKVFIGGLSNNTVHKDLEAFFGKY 133
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G IES ++ +K T RGF F+ F ++ + I
Sbjct: 134 GKIESCELMMDKSTNRHRGFGFVMFEKEEIANHIC 168
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E RKVFIGGL T + L+AFF ++G+I +M D T R RGFGF+ + + ++ +
Sbjct: 107 EKTRKVFIGGLSNNTVHKDLEAFFGKYGKIESCELMMDKSTNRHRGFGFVMFEKEEIANH 166
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEI 98
+ R H I+ ++VE K+A+P+D I
Sbjct: 167 ICNIRYHEINSKMVEAKKALPKDLI 191
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 106 TVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
T KK+F+GGL + LR YF +G I+ V ++ + T RGF F+ F +Y ++KI
Sbjct: 15 TNKKLFIGGLSPNTTLETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKI 74
Query: 165 VLSKITLLLDRRVE 178
+L+ L ++++
Sbjct: 75 LLNSPHFLDSKKID 88
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD ++
Sbjct: 1 MFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 61 RHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F D+V+K+
Sbjct: 119 LMFDKTTNRHRGFGFVTFESEDIVEKVC 146
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 148 IHFHEINNKMVECKKAQPK-EVMSPTGSA 175
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 102/161 (63%), Gaps = 9/161 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +E+F+QFG +
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEANEHDFKEFFAQFGRVIDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS + + +E
Sbjct: 114 LMIDKDTGRPRGFGFVTF-DSEAAVEAALSGPLEICGKPIE 153
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ + + FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ A+S P I G+ +E K+A PR +
Sbjct: 138 EAALSG-PLEICGKPIEVKKAQPRGNL 163
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 102/161 (63%), Gaps = 9/161 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ ++ E D +E+F+QFG +
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEANEHDFKEFFAQFGRVIDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS + + +E
Sbjct: 114 LMIDKDTGRPRGFGFVTF-DSEAAVEAALSGPLEICGKPIE 153
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ + + FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ A+S P I G+ +E K+A PR +
Sbjct: 138 EAALSG-PLEICGKPIEVKKAQPRGNL 163
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 78 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 135
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 136 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 177
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARGL 199
>gi|350294627|gb|EGZ75712.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 324
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 100/154 (64%), Gaps = 8/154 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ + D + REYF+QFG +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDHEFREYFAQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F V+ + + + +
Sbjct: 114 LMMDKDTGRPRGFGFVTFESEAGVEACLSANLEI 147
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD + +F Q+G +VD +M D
Sbjct: 58 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMD 117
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ +S I G+ +E K+A PR +
Sbjct: 118 KDTGRPRGFGFVTFESEAGVEACLSAN-LEIHGKPIEVKKAQPRGNL 163
>gi|327273004|ref|XP_003221273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Anolis
carolinensis]
Length = 334
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%), Gaps = 7/152 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGFI + EA+ VD M
Sbjct: 78 KMFIGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKVMDQ 137
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H ++G+V++ KRA + +KK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 KEHKLNGKVIDPKRAKAM------KTKEPIKKIFVGGLSPDTPEEKIREYFGGFGEVESI 191
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI F D + V KI+ K
Sbjct: 192 ELPMDNKTNKRRGFCFITFKDEEPVKKIMEKK 223
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ + + V
Sbjct: 159 EPIKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKDEEPVKK 218
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 219 IMEKKYHNVGLSKCEIKVAMSKE 241
>gi|402868384|ref|XP_003898284.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 263
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 74/96 (77%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPKQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATV 107
D AM+ RPH ++GRVVE KR+V R++ +P A T
Sbjct: 69 DAAMNARPHKVNGRVVEPKRSVSREDSQRPGARLTT 104
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 EVDAAMNARPHKVNGRVVE 85
>gi|303312249|ref|XP_003066136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105798|gb|EER23991.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040133|gb|EFW22067.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coccidioides
posadasii str. Silveira]
Length = 495
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 102/161 (63%), Gaps = 9/161 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K+FVGG+ +D E D +++F QFG +
Sbjct: 61 -HYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 114 LMIDKDTGRPRGFGFVTF-DSEAAVEACLSQPLEILGKPIE 153
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ ++ + FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ +S +P I G+ +E K+A PR +
Sbjct: 138 EACLS-QPLEILGKPIEVKKAQPRGNL 163
>gi|417410217|gb|JAA51585.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 379
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 103/167 (61%), Gaps = 9/167 (5%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 158 PRHSEAAAAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 216
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 217 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 270
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + +K T +RGF FI F + + V KI+ K
Sbjct: 271 KIREYFGGFGEVESIELPMDK-TNKRRGFCFITFKEEEPVKKIMEKK 316
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D KR RGF FIT+ E + V
Sbjct: 253 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKTNKR-RGFCFITFKEEEPVKK 311
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 312 IMEKKYHNVGLSKCEIKVAMSKE 334
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 78 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 135
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 136 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 177
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPP 190
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+D + +SL K+F+GG+ + TT+ES FE++G I D V+MKD TK RGFGF+T+
Sbjct: 44 EDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 103
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLR 124
S+ ++D + + H IDGR VE KR VPR+E+ + T +K+F+GGL ED+L+
Sbjct: 104 SDPSVIDKVLED-DHVIDGRTVEVKRTVPREEMITKDGPKT-RKIFIGGLPPSLTEDELK 161
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++FS +G + ++ + TG RGF F+ F D V++++
Sbjct: 162 DHFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 202
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+FIGGL T++ L+ F +G +V+ +M D T RSRGFGF+T+ V+ +S
Sbjct: 144 RKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVIS 203
Query: 77 -NRPHNIDGRVVETKRAVPR 95
R ++ G+ VE K+A P+
Sbjct: 204 EGRMRDLGGKQVEIKKAEPK 223
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 102/161 (63%), Gaps = 8/161 (4%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ +D E+D +F+QFG +
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEK------TAKIFVGGVSQDATEEDFESFFAQFGRVIDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F+ V++ + +L + +E
Sbjct: 114 LMMDKDTGRPRGFGFVTFDSDAAVERCLEYHPLEILGKPIE 154
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T+E ++FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTAKIFVGGVSQDATEEDFESFFAQFGRVIDATLMMDKDTGRPRGFGFVTFDSDAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
+ + P I G+ +E KRA PR ++G+
Sbjct: 138 ERCLEYHPLEILGKPIEVKRAQPRGKMGE 166
>gi|433344|gb|AAC50056.1| p37 AUF1 [Homo sapiens]
Length = 286
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 65 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 122
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 123 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 176
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 177 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 222
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 158 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 218 IMEKKYHNVGLSKCEIKVAMSKE 240
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 78 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 135
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 136 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 177
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPP 190
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 78 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 135
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 136 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 177
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPP 190
>gi|181914|gb|AAA35781.1| DNA-binding protein [Homo sapiens]
Length = 328
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 63 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 121
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 122 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 175
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RG FI F + + V KI+ K
Sbjct: 176 KIREYFGGFGEVESIELPMDNKTNKRRGLCFITFKEEEPVKKIMEKK 222
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RG FIT+ E + V
Sbjct: 158 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGLCFITFKEEEPVKK 217
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 218 IMEKKYHNVGLSKCEIKVAMSKE 240
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 102/155 (65%), Gaps = 8/155 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 42 KMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTVNIVMV- 100
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ + D + +EYF+QFG +
Sbjct: 101 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDQEFKEYFAQFGRVVDA 154
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F V+ + +++ +
Sbjct: 155 TLMMDKDTGRPRGFGFLTFESEAGVEACLSTELEI 189
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD+ + +F Q+G +VD +M D
Sbjct: 100 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMD 159
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T R RGFGF+T+ V+ +S I G+ +E K+A PR +
Sbjct: 160 KDTGRPRGFGFLTFESEAGVEACLSTE-LEIHGKAIEVKKAQPRGNL 205
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 106/172 (61%), Gaps = 12/172 (6%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+ + TT++ L+ +F+++GE+V+ V+MKD T+R+RGFGF+ +++ + D + +
Sbjct: 7 KLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFADPAIADRVVLD 66
Query: 78 RPHNIDGRVVETKRAVPRDE----------IGKPEANATVKKMFVGGLKDQ-EEDDLREY 126
+ H IDGR VE K+A+PRD+ P + KK+FVGGL E+D R+Y
Sbjct: 67 K-HTIDGRTVEAKKAIPRDDQQHMNRNSNIAHAPPSQVRTKKIFVGGLAPTVTENDFRKY 125
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
F QFGTI V ++ + T RGF FI ++ D VD+++ L + VE
Sbjct: 126 FEQFGTITDVVVMYDHSTQRPRGFGFITYDSEDAVDQVLQKTFHDLNGKMVE 177
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T+ + +FEQ+G I DVVVM D T+R RGFGFITY VD +
Sbjct: 106 KKIFVGGLAPTVTENDFRKYFEQFGTITDVVVMYDHSTQRPRGFGFITYDSEDAVDQVLQ 165
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H+++G++VE KRAVP++
Sbjct: 166 KTFHDLNGKMVEVKRAVPKE 185
>gi|344238619|gb|EGV94722.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Cricetulus griseus]
Length = 282
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF +
Sbjct: 4 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEE 63
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K + E
Sbjct: 64 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAE 112
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 39 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 98
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 99 VLQKYHTINGHNAEVRKALSRQEM 122
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARGL 203
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|431916163|gb|ELK16415.1| Heterogeneous nuclear ribonucleoprotein D0 [Pteropus alecto]
Length = 334
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARGL 203
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 61 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 118
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 119 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 160
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 89 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 148
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 149 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARGL 182
>gi|326431512|gb|EGD77082.1| RNA binding protein [Salpingoeca sp. ATCC 50818]
Length = 386
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 112/179 (62%), Gaps = 14/179 (7%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E+ RK+F+G LD RTT E L +F+++G IVD VVM D RSRGFGF+T+ EA V+
Sbjct: 16 ENNRKIFVGSLDPRTTREQLVDYFDKFGNIVDCVVMTDAQGTRSRGFGFVTFKEAASVEQ 75
Query: 74 AMSNRPHNIDGRVVETKRAVPR----------DEIGKPEANATVKKMFVGGL-KDQEEDD 122
+++ PH I GRV++ KRA+PR + + V+K+F+GGL D +E++
Sbjct: 76 VLASGPHEIAGRVIDPKRALPRHHHDDPHQQQQQQPQQHRQPRVRKVFLGGLPHDAKEEE 135
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLD---RRVE 178
++++FS++G +E V + ++ +G RGF F+ F + VD++V S + ++ +RVE
Sbjct: 136 IKDFFSKYGDVEDVIIQYDRISGRPRGFGFVVFENDATVDQLVTSSERVYVEFKGKRVE 194
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARGL 203
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 62 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 119
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 120 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 161
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 90 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 149
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 150 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARGL 183
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 14/173 (8%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+ + T +E L+ +F +GE+V+ V+MKD T R+RGFGF+ +S+ + + +
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAIAEIVIKE 66
Query: 78 RPHNIDGRVVETKRAVPRDE-----------IGKPEANATVKKMFVGGLKDQ-EEDDLRE 125
+ HNIDGR+VE K+AVPRD+ G P T +K+FVGGL E D ++
Sbjct: 67 K-HNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRT-RKIFVGGLASTVTESDFKK 124
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF QFGTI V ++ + T RGF FI ++ + VDK++L L + VE
Sbjct: 125 YFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVE 177
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P RK+F+GGL T+ + +F+Q+G I DVVVM D T+R RGFGFITY + VD
Sbjct: 102 PGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD 161
Query: 73 DAMSNRPHNIDGRVVETKRAVPRD 96
+ H ++G++VE KRAVP++
Sbjct: 162 KVLLKTFHELNGKMVEVKRAVPKE 185
>gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus]
Length = 304
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF
Sbjct: 82 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 141 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 194
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 195 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 241
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 177 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 237 IMEKKYHNVGLSKCEIKVAMSKE 259
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARGL 203
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 103/162 (63%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGLD+ T++E L+ +F ++GE++D +M++ T RSRGFGF+T++E + VD+ +
Sbjct: 129 KMFIGGLDWDTSEERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSVDEVVKT 188
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
H +DG+V++ KRA+PRDE K K+FVGG+ + + +F +FGTI
Sbjct: 189 E-HVLDGKVIDPKRAIPRDEQDK------TGKIFVGGIAPEVRPKEFENFFGKFGTIIDA 241
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F+ D VD++ + R++E
Sbjct: 242 QLMLDKDTGRSRGFGFVTFDAPDAVDRVCQGRYLDFNGRQIE 283
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF ++G I+D +M D T RSRGFGF+T+ VD
Sbjct: 213 KIFVGGIAPEVRPKEFENFFGKFGTIIDAQLMLDKDTGRSRGFGFVTFDAPDAVDRVCQG 272
Query: 78 RPHNIDGRVVETKRAVPR 95
R + +GR +E KRA PR
Sbjct: 273 RYLDFNGRQIEVKRAEPR 290
>gi|351694939|gb|EHA97857.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 129
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Query: 43 IVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHN--IDGRVVETKRAVPRDEIGK 100
+ D VVM+DP TKRSRGFGF+TY+ + VD R +DG VVE KR V R++ +
Sbjct: 2 LTDCVVMRDPNTKRSRGFGFVTYATVEEVDAGSHERKATQVMDGGVVEPKRTVSREDSQR 61
Query: 101 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P A+ TVKK+FVGG+K D EE L++YF Q+G IE + ++T++ + KRGFAF+ F+D+D
Sbjct: 62 PGAHLTVKKIFVGGIKEDTEEHHLQDYFKQYGKIEVIEIMTDRGSRKKRGFAFVTFDDHD 121
Query: 160 VVDKIVL 166
VDKIV+
Sbjct: 122 SVDKIVI 128
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T + LQ +F+Q+G+I + +M D +++ RGF F+
Sbjct: 56 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLQDYFKQYGKIEVIEIMTDRGSRKKRGFAFV 115
Query: 64 TYSEAKMVD 72
T+ + VD
Sbjct: 116 TFDDHDSVD 124
>gi|116256516|ref|NP_001070735.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Mus musculus]
gi|148688365|gb|EDL20312.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Mus
musculus]
Length = 287
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|51477708|ref|NP_001003810.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Homo sapiens]
gi|332819424|ref|XP_003310366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735086|ref|XP_003776520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pongo abelii]
gi|119626285|gb|EAX05880.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_g [Homo sapiens]
Length = 287
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|449499935|ref|XP_004175398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 340
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 49 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 106
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 107 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 160
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 161 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 206
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 142 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 201
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 202 IMEKKYHNVGLSKCEIKVAMSKE 224
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVD 75
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG
Sbjct: 76 KVLAQTRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFG 133
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 134 KVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 167
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P ++
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSS 196
>gi|127139464|ref|NP_001076009.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Rattus
norvegicus]
gi|149046817|gb|EDL99591.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Rattus
norvegicus]
Length = 304
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF
Sbjct: 82 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 141 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 194
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 195 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 241
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 177 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 237 IMEKKYHNVGLSKCEIKVAMSKE 259
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G ++D+ +MKD T RSRGFGF+T+ + VD+ +
Sbjct: 160 KMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEVVKT 219
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + E+F+Q+GTI
Sbjct: 220 Q-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGADVRPKEFEEFFAQWGTIIDA 272
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K +++E
Sbjct: 273 QLMLDKDTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKKIE 314
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + K+F+GG+ + + FF QWG I+D +M D T RSRGFGF+TY V
Sbjct: 238 EQDKTGKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAV 297
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
D N+ + G+ +E KRA PR
Sbjct: 298 DRVCQNKFIDFKGKKIEIKRAEPR 321
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 107 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+ KMF+GGL + ED LR+YFS++G + + ++ + TG RGF F+ F+ VD++V
Sbjct: 158 ICKMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEVV 217
Query: 166 LSKITLLLDRRV 177
K +LD +V
Sbjct: 218 --KTQHILDGKV 227
>gi|74001711|ref|XP_857875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 9
[Canis lupus familiaris]
Length = 287
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 103/163 (63%), Gaps = 4/163 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + TT+ES FE++G I D V+MKD TK RGFGF+T+S+ ++D + +
Sbjct: 29 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 88
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
H IDGR VE KR VPR+E+ + T +K+FVGG+ ED L+E+FS +G +
Sbjct: 89 E-HTIDGRTVEVKRTVPREEMSSKDGPKT-RKIFVGGIPPSLTEDKLKEHFSSYGKVVEH 146
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVL-SKITLLLDRRVE 178
++ + TG RGF F+ F + D V++++ ++ L ++VE
Sbjct: 147 QIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVE 189
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S P++ RK+F+GG+ T++ L+ F +G++V+ +M D T RSRGFGF
Sbjct: 104 PREEMSSKDGPKT-RKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGF 162
Query: 63 ITYSEAKMVDDAMS-NRPHNIDGRVVETKRAVPRDEIG 99
+T+ V+ MS R H++ G+ VE K+A P+ G
Sbjct: 163 VTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKKPGG 200
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 103/163 (63%), Gaps = 4/163 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + TT+ES FE++G I D V+MKD TK RGFGF+T+S+ ++D + +
Sbjct: 92 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 151
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
H IDGR VE KR VPR+E+ + T +K+FVGG+ ED L+E+FS +G +
Sbjct: 152 E-HTIDGRTVEVKRTVPREEMSSKDGPKT-RKIFVGGIPPSLTEDKLKEHFSSYGKVVEH 209
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVL-SKITLLLDRRVE 178
++ + TG RGF F+ F + D V++++ ++ L ++VE
Sbjct: 210 QIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVE 252
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + S P++ RK+F+GG+ T++ L+ F +G++V+ +M D T RSRGFGF
Sbjct: 167 PREEMSSKDGPKT-RKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGF 225
Query: 63 ITYSEAKMVDDAMS-NRPHNIDGRVVETKRAVPRDEIG 99
+T+ V+ MS R H++ G+ VE K+A P+ G
Sbjct: 226 VTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKKPGG 263
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD ++
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 61 RHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F D+V+K+
Sbjct: 119 LMFDKTTNRHRGFGFVTFESEDIVEKVC 146
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 148 IHFHEINNKMVECKKAQPK-EVMSPTGSA 175
>gi|116256518|ref|NP_001070734.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Mus musculus]
gi|148688364|gb|EDL20311.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Mus
musculus]
Length = 336
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Homo sapiens]
gi|332819428|ref|XP_003310368.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735088|ref|XP_003776521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 4
[Pongo abelii]
gi|402869393|ref|XP_003898747.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Papio anubis]
gi|2815614|gb|AAC23476.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|119626279|gb|EAX05874.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626283|gb|EAX05878.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626288|gb|EAX05883.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|158258851|dbj|BAF85396.1| unnamed protein product [Homo sapiens]
gi|380783615|gb|AFE63683.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|383417961|gb|AFH32194.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|384940048|gb|AFI33629.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
Length = 336
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|410351153|gb|JAA42180.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 337
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 68 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 125
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 126 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 179
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 180 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 225
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 161 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 220
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 221 IMEKKYHNVGLSKCEIKVAMSKE 243
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT++ L+ +F ++G +VD+ +MKD T RSRGFGF+T+ + VD+ +
Sbjct: 194 KLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDEVVKT 253
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + E+F+Q+GTI
Sbjct: 254 Q-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGPDVRPKEFEEFFAQWGTIIDA 306
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ + VD++ +K +++E
Sbjct: 307 QLMLDKDTGRSRGFGFITYDSSEAVDRVCQNKYIDFKGKQIE 348
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + FF QWG I+D +M D T RSRGFGFITY ++ VD N
Sbjct: 278 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSSEAVDRVCQN 337
Query: 78 RPHNIDGRVVETKRAVPR 95
+ + G+ +E KRA PR
Sbjct: 338 KYIDFKGKQIEIKRAAPR 355
>gi|268579353|ref|XP_002644659.1| Hypothetical protein CBG14639 [Caenorhabditis briggsae]
Length = 333
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 14/162 (8%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P LRK+FIGGL + TTDE L +F QWG +VD +V++DP TK SRGFGF+T+ +
Sbjct: 66 PPQLRKLFIGGLSHETTDEQLGNYFSQWGHVVDAIVIRDPNTKTSRGFGFVTFHSIFSAE 125
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDE----IGKP--EANATVK-KMFVGGLKD--QEEDDL 123
AM++RPH + G+ V++KRA+PR++ I P E + + K+ + G+ D L
Sbjct: 126 AAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPSPGCKLLLSGITSGVHSVDSL 185
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
R YF FGT++ V ++ G RG F+ + D + D+ +
Sbjct: 186 RVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVD 75
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG
Sbjct: 76 KVLAQTRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFG 133
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 134 KVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 167
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P ++
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSS 196
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ T+++ L +F Q+GE+VD +M+D T +SRGFGF+T+ + K V++ +
Sbjct: 162 KMFIGGLNWDTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVI-K 220
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
R H +DG++++ KRA+ R+E K V K+FVGG+ E + ++FSQFG+I
Sbjct: 221 RDHILDGKLIDPKRAIAREEQDK------VGKIFVGGIDPMVNEKEFHDFFSQFGSIIDA 274
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VD++ ++K L + +E
Sbjct: 275 QLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSME 316
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + + K+F+GG+D ++ FF Q+G I+D +M D T RSRGFGFITY V
Sbjct: 240 EQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAV 299
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
D N+ + G+ +E KRA PR
Sbjct: 300 DRVTVNKYLTLKGKSMEVKRAEPR 323
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 95/148 (64%), Gaps = 3/148 (2%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD ++
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 61 RHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F D+V+K+
Sbjct: 119 LMFDKTTNRHRGFGFVTFESEDIVEKVC 146
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 148 IHFHEINNKMVECKKAQPK-EVMSPTGSA 175
>gi|403263354|ref|XP_003924002.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Saimiri boliviensis boliviensis]
Length = 336
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|74001707|ref|XP_535627.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Canis lupus familiaris]
Length = 336
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|395834195|ref|XP_003790097.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Otolemur garnettii]
Length = 336
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|417399538|gb|JAA46770.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 354
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 103/167 (61%), Gaps = 9/167 (5%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAAAAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + +K T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDK-TNKRRGFCFITFKEEEPVKKIMEKK 242
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D KR RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKTNKR-RGFCFITFKEEEPVKK 237
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 238 IMEKKYHNVGLSKCEIKVAMSKE 260
>gi|194390332|dbj|BAG61935.1| unnamed protein product [Homo sapiens]
Length = 303
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 34 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 91
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 92 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 145
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 146 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 191
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 127 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 186
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 187 IMEKKYHNVGLSKCEIKVAMSKE 209
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 62/156 (39%), Positives = 100/156 (64%), Gaps = 8/156 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+ESL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 106 KMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMV- 164
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PR+E K+FVGG+ ++ E+D +F QFG +
Sbjct: 165 KEHYLDGKIIDPKRAIPREE------QERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDA 218
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +KETG RGF F+ F+ VD + + + +L
Sbjct: 219 TLMMDKETGRPRGFGFVTFDGDAAVDATLRAPLQIL 254
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T+E FF+Q+G +VD +M D
Sbjct: 164 VKEHYLDGKIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMD 223
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKK 109
T R RGFGF+T+ V DA P I G+ +E KRA PR + E KK
Sbjct: 224 KETGRPRGFGFVTFDGDAAV-DATLRAPLQILGKQIEVKRAQPRGNMRDEEGGDGGKK 280
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 102/155 (65%), Gaps = 8/155 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 117 KMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVNIVMV- 175
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ +D + + +++F+QFG +
Sbjct: 176 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQDTTDQEFKDFFAQFGRVVDA 229
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F VD + ++ +
Sbjct: 230 TLMMDKDTGRPRGFGFVTFESEAGVDACLAQELEI 264
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ TTD+ + FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 195 EQEKTSKIFVGGVSQDTTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 254
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
D ++ I G+ +E K+A PR +
Sbjct: 255 DACLAQE-LEIHGKPIEVKKAQPRGNM 280
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 96/149 (64%), Gaps = 3/149 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++TT E L+ +F +G++ + +VM+DP+TKRSRGFGF+T+ + VD ++
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 81 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDA 138
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F D+V+KI
Sbjct: 139 MLMFDKTTNRHRGFGFVTFEGEDIVEKIC 167
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICD 168
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 169 IHFHEINNKMVECKKAQPKE 188
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYFS FG ++ ++ + T RGF
Sbjct: 5 APQPGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|13124487|sp|Q9JJ54.1|HNRPD_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|9588096|dbj|BAB03465.1| RNA binding protein p45AUF1 [Rattus norvegicus]
Length = 353
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF
Sbjct: 82 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 141 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 194
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 195 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 241
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 177 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 237 IMEKKYHNVGLSKCEIKVAMSKE 259
>gi|344257880|gb|EGW13984.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 122
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 71/93 (76%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + T D+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETADDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
D AM RPH +DGRVVE KRAV R++ KP A+
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAH 100
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETADDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 66 EVDAAMCARPHKVDGRVVE 84
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 61/165 (36%), Positives = 104/165 (63%), Gaps = 8/165 (4%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+C ++ K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ +
Sbjct: 146 ECISDDAPDKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDP 205
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYF 127
K V+ M + H +DG++++ KRA+PRDE K+FVGG+ ++ E D +++F
Sbjct: 206 KTVNTVMV-KEHYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQEATEQDFKQFF 258
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
QFG + ++ +K++G RGF F+ F+ V+ + + +L
Sbjct: 259 MQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL 303
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ + FF Q+G +VD +M D
Sbjct: 213 VKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMID 272
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ R RGFGF+T+ V+ +S P I G+ +E K+A PR
Sbjct: 273 KDSGRPRGFGFVTFDSEAAVEATLSG-PLEILGKPIEVKKAQPR 315
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 96/149 (64%), Gaps = 3/149 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++TT E L+ +F +G++ + +VM+DP+TKRSRGFGF+T+ + VD ++
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 81 SRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDA 138
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F D+V+KI
Sbjct: 139 MLMFDKTTNRHRGFGFVTFEGEDIVEKIC 167
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICD 168
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 169 IHFHEINNKMVECKKAQPKE 188
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYFS FG ++ ++ + T RGF
Sbjct: 5 APQPGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|410292490|gb|JAA24845.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 336
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 178
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 179 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|224049399|ref|XP_002190694.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Taeniopygia guttata]
gi|449499942|ref|XP_004175399.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 318
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 49 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 106
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 107 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 160
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 161 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 206
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 142 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 201
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 202 IMEKKYHNVGLSKCEIKVAMSKE 224
>gi|417409283|gb|JAA51156.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 279
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 103/167 (61%), Gaps = 9/167 (5%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 9 PRHSEAAAAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 67
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 68 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 121
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + +K T +RGF FI F + + V KI+ K
Sbjct: 122 KIREYFGGFGEVESIELPMDK-TNKRRGFCFITFKEEEPVKKIMEKK 167
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D KR RGF FIT+ E + V
Sbjct: 104 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKTNKR-RGFCFITFKEEEPVKK 162
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 163 IMEKKYHNVGLSKCEIKVAMSKE 185
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 62/156 (39%), Positives = 100/156 (64%), Gaps = 8/156 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 103 KMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIVMV- 161
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PR+E K K+FVGG+ ++ E D + +F QFG +
Sbjct: 162 KEHYLDGKIIDPKRAIPREEQEK------TAKIFVGGVSQEATEQDFKSFFEQFGRVIDA 215
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +K+TG RGF F+ F+ VD + + +L
Sbjct: 216 TLMMDKDTGRPRGFGFVTFDGEAAVDACLQGPLAIL 251
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 27/130 (20%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ T++ ++FFEQ+G ++D +M D
Sbjct: 161 VKEHYLDGKIIDPKRAIPREEQEKTAKIFVGGVSQEATEQDFKSFFEQFGRVIDATLMMD 220
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMF 111
T R RGFGF+T+ VD + P I G+ +E KRA PR
Sbjct: 221 KDTGRPRGFGFVTFDGEAAVDACLQG-PLAILGKPIEVKRAQPR---------------- 263
Query: 112 VGGLKDQEED 121
G LKD ++D
Sbjct: 264 -GNLKDNDDD 272
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 103/161 (63%), Gaps = 3/161 (1%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD ++
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQP 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 61 HHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 119 LMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 159
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPP 172
>gi|127138710|ref|NP_077380.2| heterogeneous nuclear ribonucleoprotein D0 isoform a [Rattus
norvegicus]
gi|149046816|gb|EDL99590.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Rattus
norvegicus]
Length = 353
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF
Sbjct: 82 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 141 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEE 194
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 195 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 241
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 177 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 237 IMEKKYHNVGLSKCEIKVAMSKE 259
>gi|357628443|gb|EHJ77777.1| hypothetical protein KGM_04418 [Danaus plexippus]
Length = 414
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T+ E+LQ +F ++G+++D VVMK+ + RSRGFGF+T++E +V+ + N
Sbjct: 14 KLFVGGLSWETSQENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ K+F+GGL E DLR +F ++G + V
Sbjct: 74 GPHQLDGRTIDPKPCNPR-TLQKPKRGGGYPKVFLGGLPSNITETDLRVFFGRYGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D V+++ L ++VE
Sbjct: 133 VIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVE 174
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P +L+K VF+GGL T+ L+ FF ++G++++VV+M D K+S
Sbjct: 84 DPKPCNPRTLQKPKRGGGYPKVFLGGLPSNITETDLRVFFGRYGKVMEVVIMYDQEKKKS 143
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
RGFGF+++ + V+ N++G+ VE KRA PRD
Sbjct: 144 RGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAEPRD 182
>gi|345564567|gb|EGX47528.1| hypothetical protein AOL_s00083g337 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 61/146 (41%), Positives = 97/146 (66%), Gaps = 8/146 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTDESL+ +F Q+GE+ + VM+D + RSRGFGF+T+ + K V+ M
Sbjct: 159 KMFIGGLNWETTDESLRDYFSQFGEVSECTVMRDGPSGRSRGFGFLTFKDPKTVNIVMV- 217
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K+FVGG+ ++ E++ + +F QFG +
Sbjct: 218 KEHYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQEASEEEFKNFFMQFGRVIDS 271
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVD 162
++ +KETG RGF F+ F++ VD
Sbjct: 272 TLMIDKETGRPRGFGFVTFDNEAAVD 297
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ ++E + FF Q+G ++D +M D
Sbjct: 217 VKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEASEEEFKNFFMQFGRVIDSTLMID 276
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T R RGFGF+T+ VD A+ + I + +E K+A PR
Sbjct: 277 KETGRPRGFGFVTFDNEAAVDLALQHPDLRIRDKPIEVKKAQPR 320
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ T+++ L +F Q+GE+VD +M+D T +SRGFGF+T+ + K V++ +
Sbjct: 162 KMFIGGLNWDTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVI-K 220
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
R H +DG++++ KRA+ R+E K V K+FVGG+ E + ++FSQFG+I
Sbjct: 221 RDHILDGKLIDPKRAIAREEQDK------VGKIFVGGIDPMVNEKEFHDFFSQFGSIIDA 274
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VD++ ++K L + +E
Sbjct: 275 QLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSME 316
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + + K+F+GG+D ++ FF Q+G I+D +M D T RSRGFGFITY V
Sbjct: 240 EQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAV 299
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
D N+ + G+ +E KRA PR
Sbjct: 300 DRVTVNKYLTLKGKSMEVKRAEPR 323
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ ESL+ +F ++GEI +V+++P TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 181
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|318086954|gb|ADV40069.1| putative heterogeneous nuclear ribonucleoprotein isoform A
[Latrodectus hesperus]
Length = 293
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + TT E LQ +F ++GE+VD VVMK+ T RSRGFGF+T+ + V
Sbjct: 13 EEAGKIFVGGLSWETTQEKLQEYFSRYGEVVDCVVMKNSETNRSRGFGFVTFKDVACVAK 72
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGT 132
+S+ PH +DGR ++ K RD +A K+F+GGL + E DLR +FS++GT
Sbjct: 73 VLSSGPHEVDGRTIDPKVCSSRDSQQNKKA-GQYPKVFLGGLPPNCTETDLRSFFSRYGT 131
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+ V ++ ++E RGF F+ F D V ++ + +++E
Sbjct: 132 VVEVVLMYDQEKKKSRGFGFLSFETEDSVKQVCAEHFVKINGKKIE 177
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVF+GGL T+ L++FF ++G +V+VV+M D K+SRGFGF+++ V +
Sbjct: 107 KVFLGGLPPNCTETDLRSFFSRYGTVVEVVLMYDQEKKKSRGFGFLSFETEDSVKQVCAE 166
Query: 78 RPHNIDGRVVETKRAVPRDE 97
I+G+ +E K A PRD+
Sbjct: 167 HFVKINGKKIECKHAEPRDK 186
>gi|47217429|emb|CAG00789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 476
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 96/162 (59%), Gaps = 16/162 (9%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 1 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANAT-------------VKKMFVGGL-KDQEEDDL 123
+PHN+DGR ++ K PR +PE + T KK+FVGG+ + E +L
Sbjct: 61 KPHNLDGRNIDPKPCTPRGM--QPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPEL 118
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
R+YF++FG + V M+ + E RGF FI F VD+ V
Sbjct: 119 RDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAV 160
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFGFIT+ + VD A++
Sbjct: 102 KKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVN 161
Query: 77 NRPHNIDGR 85
H+I G+
Sbjct: 162 MHFHDIMGK 170
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGGL ++ LR YFSQ+G + ++ +K T RGF F++F D + V ++ +
Sbjct: 1 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 60
Query: 168 KITLLLDRRVE 178
K L R ++
Sbjct: 61 KPHNLDGRNID 71
>gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 215
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%), Gaps = 7/152 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+ + E++ VD M
Sbjct: 7 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 66
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H ++G+V++ KRA + VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 67 KEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESI 120
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI F + + V KI+ K
Sbjct: 121 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 152
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 88 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 147
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 148 IMEKKYHNVGLSKCEIKVAMSKE 170
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 99/156 (63%), Gaps = 8/156 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT++SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 108 KMFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMV- 166
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PR+E K+FVGG+ ++ E+D +F QFG +
Sbjct: 167 KEHYLDGKIIDPKRAIPREE------QERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDA 220
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +KETG RGF F+ F+ VD + + +L
Sbjct: 221 TLMMDKETGRPRGFGFVTFDGDAAVDATLRGPLQIL 256
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T+E FF+Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 186 EQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAV 245
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
D + P I G+ +E KRA PR +
Sbjct: 246 DATLRG-PLQILGKQIEVKRAQPRGNM 271
>gi|162462398|ref|NP_001104824.1| hnRNPA/B-like 28 [Bombyx mori]
gi|161334098|gb|ABX60898.1| hnRNPA/B-like protein [Bombyx mori]
Length = 250
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T+ E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+++ +V+ + N
Sbjct: 8 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 67
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ K+F+GGL E DLR +F ++G + V
Sbjct: 68 GPHQLDGRTIDPKPCNPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEV 126
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D V+++ L ++VE
Sbjct: 127 VIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVE 168
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P +L+K VF+GGL T+ L+ FF ++G++++VV+M D K+S
Sbjct: 78 DPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEKKKS 137
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
RGFGF+++ + V+ N++G+ VE KRA PRD
Sbjct: 138 RGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAEPRD 176
>gi|294658754|ref|XP_002770838.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
gi|202953359|emb|CAR66359.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
Length = 411
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT++ L +F ++GE++D +M+D T +SRGFGF+T+ + K VD+ +
Sbjct: 87 KMFIGGLNWDTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDEVIKT 146
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
H +DG++++ KRA+ R+E K V K+FVGG+ E D ++FSQFG+I
Sbjct: 147 D-HILDGKLIDPKRAIAREEQDK------VGKIFVGGIDPMVNEKDFNDFFSQFGSIIDA 199
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VD++ ++K L + +E
Sbjct: 200 QLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSME 241
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + + K+F+GG+D ++ FF Q+G I+D +M D T RSRGFGFITY V
Sbjct: 165 EQDKVGKIFVGGIDPMVNEKDFNDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAV 224
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
D N+ + G+ +E KRA PR
Sbjct: 225 DRVTVNKYLTLKGKSMEVKRAEPR 248
>gi|449273028|gb|EMC82657.1| DAZ-associated protein 1, partial [Columba livia]
Length = 395
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 10/171 (5%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 RPHNIDGRVVETKRAVPR---DEIGKPEANATVKKMFV-------GGLKDQEEDDLREYF 127
RPH +DGR ++ K PR E +P+ K + G + E +LREYF
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWVRKDTWCSCDFIINGIPHNCGETELREYF 120
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 121 KKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 171
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 21 IGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPH 80
I G+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD A++ H
Sbjct: 104 INGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFH 163
Query: 81 NIDGRVVETKRAVPRDE 97
+I G+ VE KRA PRD
Sbjct: 164 DIMGKKVEVKRAEPRDS 180
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 100/154 (64%), Gaps = 8/154 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ + D + ++YF+QFG +
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDQEFKDYFAQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F VD + + + +
Sbjct: 114 LMMDKDTGRPRGFGFVTFESEAGVDACLSTSLEI 147
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ TTD+ + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANA 105
D +S I G+ +E K+A PR + + E A
Sbjct: 138 DACLSTS-LEIHGKPIEVKKAQPRGNLREEEEAA 170
>gi|395746892|ref|XP_003778531.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like [Pongo abelii]
Length = 254
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 73/97 (75%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL++ TT+ESL++ FEQWG + D VVM+DP TK S GFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLNFETTNESLRSHFEQWGTLTDCVVMRDPSTKCSWGFGFVTYAPVEAV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
D AM+ RPH +DGR VE +RAV R + +P A+ TV
Sbjct: 69 DAAMNARPHKVDGRAVEXQRAVSRGDSQRPGAHLTVN 105
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 101 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + + LR +F Q+GT+ ++ + T GF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLNFETTNESLRSHFEQWGTLTDCVVMRDPSTKCSWGFGFVTYAPVE 66
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + ++ + R VE
Sbjct: 67 AVDAAMNARPHKVDGRAVE 85
>gi|58332792|ref|NP_001011470.1| musashi RNA-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|147899394|ref|NP_001081302.1| nrp-1B [Xenopus laevis]
gi|214632|gb|AAA49920.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
gi|52221204|gb|AAH82667.1| LOC397764 protein [Xenopus laevis]
gi|56970642|gb|AAH88603.1| musashi homolog 1 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 96/149 (64%), Gaps = 3/149 (2%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++TT E L+ +F +G++ + +VM+DP+TKRSRGFGF+T+ + VD ++
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 81 SRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDA 138
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ +K T RGF F+ F D+V+K+
Sbjct: 139 MLMFDKTTNRHRGFGFVTFEGEDIVEKVC 167
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCD 168
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 169 IHFHEINNKMVECKKAQPKE 188
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYFS FG ++ ++ + T RGF
Sbjct: 5 APQPGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|345790931|ref|XP_854252.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Canis lupus
familiaris]
Length = 362
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGV 74
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 75 DKVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQF 132
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ ++ +K T RGF F+ F D+V+K+
Sbjct: 133 EKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 167
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+ ++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 93 VPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFA 151
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF
Sbjct: 5 APQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 64
Query: 152 FIEFNDYDVVDKIV 165
F+ F D VDK++
Sbjct: 65 FVTFMDQAGVDKVL 78
>gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 267
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%), Gaps = 7/152 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+ + E++ VD M
Sbjct: 10 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 69
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H ++G+V++ KRA + VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 70 KEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESI 123
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI F + + V KI+ K
Sbjct: 124 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 155
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 91 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 150
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 151 IMEKKYHNVGLSKCEIKVAMSKE 173
>gi|336472157|gb|EGO60317.1| hypothetical protein NEUTE1DRAFT_56573, partial [Neurospora
tetrasperma FGSC 2508]
Length = 139
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 94/138 (68%), Gaps = 8/138 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV-K 59
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K K+FVGG+ + D + REYF+QFG +
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDHEFREYFAQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEF 155
++ +K+TG RGF F+ F
Sbjct: 114 LMMDKDTGRPRGFGFVTF 131
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 1 MKPRYDDSKCTEP---------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+K Y D K +P E K+F+GG+ TTD + +F Q+G +VD +M D
Sbjct: 58 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMD 117
Query: 52 PITKRSRGFGFITY-SEA 68
T R RGFGF+T+ SEA
Sbjct: 118 KDTGRPRGFGFVTFESEA 135
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 110 MFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
MF+GGL + D LR+YFSQFG + ++ + TG RGF F+ F D V+ +++ +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 169 ITL 171
L
Sbjct: 61 HYL 63
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 61 HHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 119 LMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 159
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPP 172
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 105/174 (60%), Gaps = 15/174 (8%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+ + T +E L+ +F +GE+V+ V+MKD T R+RGFGF+ +++A + + +
Sbjct: 7 KLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIME 66
Query: 78 RPHNIDGRVVETKRAVPRDE------------IGKPEANATVKKMFVGGLKDQ-EEDDLR 124
+ HNIDGR+VE K+AVPRD+ G P T +K+FVGGL E D R
Sbjct: 67 K-HNIDGRMVEAKKAVPRDDQNILNRSTGSSIHGSPGPGRT-RKIFVGGLASTVTETDFR 124
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+YF Q+GTI V ++ + T RGF FI ++ + VDK+++ L + VE
Sbjct: 125 KYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVE 178
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P RK+F+GGL T+ + +FEQ+G I DVVVM D T+R RGFGFITY + VD
Sbjct: 103 PGRTRKIFVGGLASTVTETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD 162
Query: 73 DAMSNRPHNIDGRVVETKRAVPRD 96
+ H ++G++VE KRAVP++
Sbjct: 163 KVLMKTFHELNGKMVEVKRAVPKE 186
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 61 HHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 119 LMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 159
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPP 172
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T+ E+LQ +F ++GE++D VVMK+ + RSRGFGF+T+++ +V+ + N
Sbjct: 14 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 73
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
PH +DGR ++ K PR + KP+ K+F+GGL E DLR +F ++G + V
Sbjct: 74 GPHQLDGRTIDPKPCNPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEV 132
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ ++E RGF F+ F D V+++ L ++VE
Sbjct: 133 VIMYDQERKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVE 174
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 7 DSKCTEPESLRK---------VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRS 57
D K P +L+K VF+GGL T+ L+ FF ++G++++VV+M D K+S
Sbjct: 84 DPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQERKKS 143
Query: 58 RGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
RGFGF+++ + V+ N++G+ VE KRA PRD
Sbjct: 144 RGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAEPRD 182
>gi|127138754|ref|NP_001076010.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Rattus
norvegicus]
gi|149046820|gb|EDL99594.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Rattus
norvegicus]
Length = 285
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF+
Sbjct: 65 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFV 122
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 123 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 176
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 177 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 222
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 158 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 218 IMEKKYHNVGLSKCEIKVAMSKE 240
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 61 HHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F + DVV+K+ + ++ VE
Sbjct: 119 LMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE 159
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARGL 181
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 98/154 (63%), Gaps = 4/154 (2%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++TT + L+ +F ++GE+ + +VM+D TKRSRGFGFIT+ + V+
Sbjct: 17 PNDPGKMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVE 76
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
++ H +D + ++ K A P+ P+ T KK+FVGGL + DD++ +FSQ+G
Sbjct: 77 KVLAQAAHELDQKKIDPKVAFPKRS--HPKVTRT-KKIFVGGLSANTTADDIKNHFSQYG 133
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+E ++ +K+T RGF F+ F+ DVVDKI
Sbjct: 134 KVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKIC 167
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT + ++ F Q+G++ + +M D T R RGFGF+T+ +VD
Sbjct: 109 KKIFVGGLSANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKICE 168
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H ++ ++VE K+A P++
Sbjct: 169 IHFHEVNSKMVECKKAQPKE 188
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 109 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL Q D LREYFS+FG + ++ ++ T RGF FI F D V+K VL+
Sbjct: 22 KMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEK-VLA 80
Query: 168 KITLLLDRR 176
+ LD++
Sbjct: 81 QAAHELDQK 89
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 100/157 (63%), Gaps = 8/157 (5%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
K+FIGGL++ TTDESL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 182 FSKMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVM 241
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIE 134
+ H +DG++++ KRA+PRDE K K+FVGG+ + D + +++F+QFG +
Sbjct: 242 V-KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQETTDQEFKDFFAQFGRVV 294
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
++ +K+TG RGF F+ F V+ + + +
Sbjct: 295 DATLMMDKDTGRPRGFGFVTFESEAGVEACLARDLEI 331
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ TTD+ + FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 262 EQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 321
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ ++ R I G+++E K+A PR +
Sbjct: 322 EACLA-RDLEIHGKLIEVKKAQPRGNL 347
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 87 VETKRAVPRDEIGKPEANATVK--KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKE 143
V + R +++ +P A + V+ KMF+GGL + D+ LR+YFSQFG + ++ +
Sbjct: 160 VTSGRWSNQEQTLRPIATSLVEFSKMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGT 219
Query: 144 TGAKRGFAFIEFNDYDVVDKIVLSKITL 171
TG RGF F+ F D V+ +++ + L
Sbjct: 220 TGRSRGFGFLTFKDPKTVNIVMVKEHYL 247
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + E+ VD
Sbjct: 94 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDK 153
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + VKK+FVGGL + ED +REYF FG
Sbjct: 154 VLDQKEHRLDGRVIDPKKAMAMKK-------DPVKKIFVGGLNPEATEDKIREYFGDFGE 206
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
IES+ + + +T +RGF FI F + D V KI+ K + + E
Sbjct: 207 IESIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVGGSKCE 252
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GGL+ T++ ++ +F +GEI + + DP T + RGF FIT+ E V +
Sbjct: 180 VKKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKIL 239
Query: 76 SNRPHNIDGRVVETKRAVPRD 96
+ HN+ G E K A P++
Sbjct: 240 EKKFHNVGGSKCEIKVAQPKE 260
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 85 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 144
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F + VDK VL + LD RV
Sbjct: 145 FKESASVDK-VLDQKEHRLDGRV 166
>gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus]
Length = 285
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 9/166 (5%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF+
Sbjct: 65 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFV 122
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + VKK+FVGGL D E+
Sbjct: 123 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM------KTKEPVKKIFVGGLSPDTPEEK 176
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 177 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 222
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 158 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
M + HN+ E K A+ ++
Sbjct: 218 IMEKKYHNVGLSKCEIKVAMSKE 240
>gi|149241445|ref|XP_001526315.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450438|gb|EDK44694.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 548
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+E L F ++GE+VD +MKD T RSRGFGF+T+ + V DA+
Sbjct: 205 KMFIGGLNWDTTEEGLAEHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKDPASV-DAVIK 263
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
H +DG++++ KRA+ R++ + V K+FVGG+ E + E+FS+FG+I
Sbjct: 264 EEHILDGKLIDPKRAIAREDQDR------VGKIFVGGIDPMVTEREFNEFFSKFGSIIDC 317
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VDK+ ++K L + +E
Sbjct: 318 QLMIDKDTGRSRGFGFITYDSPDAVDKVCVNKYLTLKGKAME 359
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+D T+ FF ++G I+D +M D T RSRGFGFITY VD N
Sbjct: 289 KIFVGGIDPMVTEREFNEFFSKFGSIIDCQLMIDKDTGRSRGFGFITYDSPDAVDKVCVN 348
Query: 78 RPHNIDGRVVETKRAVPRDE 97
+ + G+ +E KRA PR +
Sbjct: 349 KYLTLKGKAMEVKRAAPRGQ 368
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 14/173 (8%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+ + T +E L+ +F +GE+V+ V+MKD T R+RGFGF+ +S+ + + +
Sbjct: 7 KLFIGGISWDTNEERLREYFCTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAEIVIKE 66
Query: 78 RPHNIDGRVVETKRAVPRDE-----------IGKPEANATVKKMFVGGLKDQ-EEDDLRE 125
+ HNIDGR+VE K+AVPRD+ G P T +K+FVGGL E D ++
Sbjct: 67 K-HNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRT-RKIFVGGLASTVTESDFKK 124
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF QFGTI V ++ + T RGF FI ++ + VDK++L L + VE
Sbjct: 125 YFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVE 177
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P RK+F+GGL T+ + +F+Q+G I DVVVM D T+R RGFGFITY + VD
Sbjct: 102 PGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD 161
Query: 73 DAMSNRPHNIDGRVVETKRAVPRD 96
+ H ++G++VE KRAVP++
Sbjct: 162 KVLLKTFHELNGKMVEVKRAVPKE 185
>gi|159163526|pdb|1X4B|A Chain A, Solution Structure Of Rrm Domain In Heterogeneous Nuclear
Ribonucleaoproteins A2B1
Length = 116
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 70/88 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 23 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 82
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIG 99
D AM+ RPH+IDGRVVE KRAV R+E G
Sbjct: 83 DAAMAARPHSIDGRVVEPKRAVAREESG 110
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD +
Sbjct: 28 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 87
Query: 167 SKITLLLDRRVE 178
++ + R VE
Sbjct: 88 ARPHSIDGRVVE 99
>gi|148703784|gb|EDL35731.1| mCG52115 [Mus musculus]
Length = 156
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 96/150 (64%), Gaps = 10/150 (6%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E LRK+FIGGL + TTD+SL+ FE+WG + D V+M +P TK SR +GF+TYS + V
Sbjct: 8 EAEQLRKLFIGGLSFETTDDSLREQFEKWGTLTDCVLMSNPQTKCSRDYGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKP--------EANATVKKMFVGGLKDQ-EEDD 122
DDAM +PH + G VV+ KRA+ R+ KP ++ TVKK+FVG +K+ ++ +
Sbjct: 68 DDAMCTQPHKVYGHVVKLKRAISRENSVKPGPQTNLDSNSDLTVKKIFVGSIKENMKKYN 127
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAF 152
R F ++G I ++ + N+++G KR
Sbjct: 128 QRINFGKYGKIATIE-IENRQSGKKRNLLL 156
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE F ++GT+ +++N +T R + F+ ++ +
Sbjct: 6 PKEAEQLRKLFIGGLSFETTDDSLREQFEKWGTLTDCVLMSNPQTKCSRDYGFVTYSCVE 65
Query: 160 VVDKIVLSK 168
VD + ++
Sbjct: 66 EVDDAMCTQ 74
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFDQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVE 181
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H++ + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 82 QKHSVLIKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF FI F D+V+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVE 181
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGFIT+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 98/155 (63%), Gaps = 8/155 (5%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVN 137
H +DG++++ KRA+PRDE K+FVGG+ ++ E D +++F QFG +
Sbjct: 61 -HYLDGKIIDPKRAIPRDE------QERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDAT 113
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
++ +K++G RGF F+ F+ V+ + + +L
Sbjct: 114 LMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL 148
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T++ + FF Q+G +VD +M D + R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAV 137
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
+ +S P I G+ +E K+A PR
Sbjct: 138 EATLSG-PLEILGKPIEVKKAQPR 160
>gi|89257506|gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 103/174 (59%), Gaps = 15/174 (8%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+ + TT++ L+ +F+ +GE+++ V+MKD T R+RGFGF+ +S+ + + +
Sbjct: 7 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFSDPIVAERVVFL 66
Query: 78 RPHNIDGRVVETKRAVPRDE------------IGKPEANATVKKMFVGGLKDQ-EEDDLR 124
R H IDG++VE K+AVPRD+ G P A KK+FVGGL E + +
Sbjct: 67 R-HVIDGKLVEAKKAVPRDDHVVLNKSYNTSLQGSP-GPANSKKIFVGGLASSVTEAEFK 124
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+YF+QFG I V ++ + T RGF FI F D VDK++ L + VE
Sbjct: 125 KYFAQFGVITDVVVMYDHRTQRPRGFGFISFESEDAVDKVLQRTFHELNGKMVE 178
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 55/92 (59%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P + +K+F+GGL T+ + +F Q+G I DVVVM D T+R RGFGFI++ VD
Sbjct: 103 PANSKKIFVGGLASSVTEAEFKKYFAQFGVITDVVVMYDHRTQRPRGFGFISFESEDAVD 162
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ H ++G++VE K AVP++ P N
Sbjct: 163 KVLQRTFHELNGKMVEVKLAVPKEMALNPIRN 194
>gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella zeae PH-1]
Length = 552
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 13/154 (8%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ +AK V+ M
Sbjct: 122 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMV- 180
Query: 78 RPHNIDGRV-----VETKRAVPRDEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFG 131
+ H +DG++ ++ KRA+PRDE K K+FVGG+ + D + +EYF+QFG
Sbjct: 181 KEHFLDGKILILLQIDPKRAIPRDEQEK------TSKIFVGGVSQETTDQEFKEYFAQFG 234
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+ ++ +K+TG RGF F+ F + VD +
Sbjct: 235 RVVDATLMMDKDTGRPRGFGFVTFENEAGVDACI 268
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ TTD+ + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 205 EQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGV 264
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
DA N P I G+ +E K+A PR +
Sbjct: 265 -DACINVPLEIHGKPIEVKKAQPRGNL 290
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 109 KMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL- 166
KMF+GGL + D LR+YF+QFG + ++ + TG RGF F+ F D V+ +++
Sbjct: 122 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK 181
Query: 167 -----SKITLLL 173
KI +LL
Sbjct: 182 EHFLDGKILILL 193
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 61 HHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F DVV+K+ + ++ VE
Sbjct: 119 LMFDKTTNRHRGFGFVTFESEDVVEKVCEIHFHEINNKMVE 159
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPP 172
>gi|432899442|ref|XP_004076560.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Oryzias latipes]
Length = 328
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H++ + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 82 QKHSVLIKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF FI F D+V+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVE 181
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGFIT+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|448522704|ref|XP_003868757.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis Co 90-125]
gi|380353097|emb|CCG25853.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis]
Length = 488
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 104/162 (64%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+E L +F ++GEI D +MKD T RSRGFGF+T+ + V D +
Sbjct: 172 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAV-DVVIK 230
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+ R++ + V K+F+GG+ E++ ++FS+FGTI
Sbjct: 231 QDHILDGKLIDPKRAISREDQDR------VGKIFIGGIDPMVSENEFNDFFSKFGTIIDC 284
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI F+ D VD++ ++K L + +E
Sbjct: 285 QLMIDKDTGRSRGFGFITFDSPDAVDRVCVNKFLTLKGKAME 326
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+D ++ FF ++G I+D +M D T RSRGFGFIT+ VD N
Sbjct: 256 KIFIGGIDPMVSENEFNDFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVN 315
Query: 78 RPHNIDGRVVETKRAVPRDE 97
+ + G+ +E KRA PR +
Sbjct: 316 KFLTLKGKAMEVKRAAPRGQ 335
>gi|255726600|ref|XP_002548226.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
gi|240134150|gb|EER33705.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
Length = 472
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K F+GGLD++TT+E L F ++GEIVD +MKD T RSRGFGF+T+ + VD + +
Sbjct: 144 KTFLGGLDWQTTEEKLVEHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASVDALLKD 203
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
R H +DG++++ KRA+ +++ K V K+F+GG+ E + E+FSQFG I
Sbjct: 204 R-HILDGKLIDPKRAISKEDQEK------VGKIFIGGIDPMVTEQEFDEFFSQFGKIIDC 256
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ VD++ ++K L + +E
Sbjct: 257 QLMIDKDTGRSRGFGFITYDSPAAVDRVCVNKYLTLKGKAME 298
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E + K+FIGG+D T++ FF Q+G+I+D +M D T RSRGFGFITY VD
Sbjct: 224 EKVGKIFIGGIDPMVTEQEFDEFFSQFGKIIDCQLMIDKDTGRSRGFGFITYDSPAAVDR 283
Query: 74 AMSNRPHNIDGRVVETKRAVPR 95
N+ + G+ +E KRA PR
Sbjct: 284 VCVNKYLTLKGKAMEVKRAAPR 305
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 64/164 (39%), Positives = 105/164 (64%), Gaps = 8/164 (4%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
+ K+FIGGL++ TT+E L+ +F ++G + +V +MKD T RSRGFGF+T+ A VD+ +
Sbjct: 185 INKMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTFENASSVDEVV 244
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIE 134
+ H +DG+V++ KRA+PR+E K K+FVGG+ D + E+FSQ+G+I
Sbjct: 245 KTQ-HILDGKVIDPKRAIPREEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGSII 297
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI ++ D VD++ +K +++E
Sbjct: 298 DAQLMLDKDTGRSRGFGFITYDTPDAVDRVCQNKFIEFKGKQIE 341
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + K+F+GG+ + + FF QWG I+D +M D T RSRGFGFITY V
Sbjct: 265 EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDTPDAV 324
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
D N+ G+ +E KRA PR
Sbjct: 325 DRVCQNKFIEFKGKQIEIKRAEPR 348
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 100 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
K + + + KMF+GGL + E+ LR+YFS++G + V ++ + TG RGF F+ F +
Sbjct: 178 KADLSRDINKMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTFENA 237
Query: 159 DVVDKIVLSKITLLLDRRV 177
VD++V K +LD +V
Sbjct: 238 SSVDEVV--KTQHILDGKV 254
>gi|431909006|gb|ELK12597.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Pteropus alecto]
Length = 220
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE ++YF +
Sbjct: 4 VDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHFKDYFEE 63
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 64 YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 102
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 2 KPRYDDSKCTEPE---------------SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDV 46
+P D + EP+ +++K+F+GG+ T + + +FE++G+I +
Sbjct: 11 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHFKDYFEEYGKIDTI 70
Query: 47 VVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVET 89
++ D + + RGFGF+T+ + VD + + H I+G E
Sbjct: 71 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEA 113
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF Q+G +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVE 181
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H++ + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 82 QKHSVLIKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF FI F D+V+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVE 181
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGFIT+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF Q+G +E
Sbjct: 82 PHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K T RGF F+ F DVV+K+ + ++ VE
Sbjct: 140 MLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVE 181
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
>gi|354547999|emb|CCE44734.1| hypothetical protein CPAR2_405380 [Candida parapsilosis]
Length = 513
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+E L +F ++GEI D +MKD T RSRGFGF+T+ + VD +
Sbjct: 194 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ 253
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
H +DG++++ KRA+ R++ + V K+F+GG+ E + E+FS+FGTI
Sbjct: 254 D-HILDGKLIDPKRAISREDQDR------VGKIFIGGIDPMVSEGEFNEFFSKFGTIIDC 306
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF FI F+ D VD++ ++K L + +E
Sbjct: 307 QLMIDKDTGRSRGFGFITFDSPDAVDRVCVNKYLTLKGKAME 348
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+D ++ FF ++G I+D +M D T RSRGFGFIT+ VD N
Sbjct: 278 KIFIGGIDPMVSEGEFNEFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVN 337
Query: 78 RPHNIDGRVVETKRAVPRDE 97
+ + G+ +E KRA PR +
Sbjct: 338 KYLTLKGKAMEVKRAAPRGQ 357
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,708,898,750
Number of Sequences: 23463169
Number of extensions: 104800042
Number of successful extensions: 328663
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15474
Number of HSP's successfully gapped in prelim test: 6937
Number of HSP's that attempted gapping in prelim test: 271293
Number of HSP's gapped (non-prelim): 48864
length of query: 178
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 45
effective length of database: 9,238,593,890
effective search space: 415736725050
effective search space used: 415736725050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)