Your job contains 1 sequence.
>psy2871
MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF
GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE
DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE
The BLAST search returned 31 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2871
(178 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0004237 - symbol:Hrb87F "Heterogeneous nuclear rib... 607 3.5e-59 1
FB|FBgn0001215 - symbol:Hrb98DE "Heterogeneous nuclear ri... 592 1.4e-57 1
ZFIN|ZDB-GENE-040426-1546 - symbol:zgc:66127 "zgc:66127" ... 531 4.0e-51 1
UNIPROTKB|Q5ZME1 - symbol:HNRNPA2B1 "Uncharacterized prot... 520 5.8e-50 1
FB|FBgn0004903 - symbol:Rb97D "Ribonuclear protein at 97D... 516 1.5e-49 1
ZFIN|ZDB-GENE-030912-14 - symbol:hnrnpa1 "heterogeneous n... 515 2.0e-49 1
UNIPROTKB|F1Q3G7 - symbol:HNRNPA1 "Uncharacterized protei... 515 2.0e-49 1
UNIPROTKB|Q5RBU8 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 515 2.0e-49 1
UNIPROTKB|F1Q1K6 - symbol:HNRNPA2B1 "Uncharacterized prot... 515 2.0e-49 1
UNIPROTKB|P22626 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 515 2.0e-49 1
MGI|MGI:104819 - symbol:Hnrnpa2b1 "heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|F1LM82 - symbol:Hnrnpa2b1 "Heterogeneous nuclea... 515 2.0e-49 1
UNIPROTKB|F1LNF1 - symbol:Hnrnpa2b1 "Heterogeneous nuclea... 515 2.0e-49 1
UNIPROTKB|P09867 - symbol:HNRNPA1 "Heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|E2QYP1 - symbol:HNRNPA1 "Uncharacterized protei... 515 2.0e-49 1
UNIPROTKB|F8VRQ1 - symbol:HNRNPA1 "Heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|F8VSB5 - symbol:HNRNPA1 "Heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|F8VXY0 - symbol:HNRNPA1 "Heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|F8VZ49 - symbol:HNRNPA1 "Heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|F8W1S7 - symbol:HNRNPA1 "Heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|F8W6I7 - symbol:HNRNPA1 "Heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|P09651 - symbol:HNRNPA1 "Heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|Q06A94 - symbol:HNRNPA1 "Uncharacterized protei... 515 2.0e-49 1
UNIPROTKB|A5A6H4 - symbol:HNRNPA1 "Heterogeneous nuclear ... 515 2.0e-49 1
MGI|MGI:104820 - symbol:Hnrnpa1 "heterogeneous nuclear ri... 515 2.0e-49 1
UNIPROTKB|D4ACJ7 - symbol:Hnrnpa1 "RCG50547, isoform CRA_... 515 2.0e-49 1
UNIPROTKB|D4ACJ8 - symbol:Hnrnpa1 "Heterogeneous nuclear ... 515 2.0e-49 1
UNIPROTKB|Q5I0M7 - symbol:Hnrnpa1 "Hnrpa1 protein" specie... 515 2.0e-49 1
RGD|69234 - symbol:Hnrnpa1 "heterogeneous nuclear ribonuc... 515 2.0e-49 1
UNIPROTKB|Q9TTV2 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 515 2.0e-49 1
UNIPROTKB|Q2HJ60 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 513 3.2e-49 1
UNIPROTKB|E1BZE6 - symbol:LOC100859627 "Uncharacterized p... 512 4.1e-49 1
UNIPROTKB|F1NBB6 - symbol:LOC100859627 "Uncharacterized p... 512 4.1e-49 1
UNIPROTKB|F1P5I0 - symbol:LOC100859627 "Uncharacterized p... 512 4.1e-49 1
UNIPROTKB|Q32P51 - symbol:HNRNPA1L2 "Heterogeneous nuclea... 511 5.2e-49 1
UNIPROTKB|Q28521 - symbol:HNRNPA1 "Heterogeneous nuclear ... 511 5.2e-49 1
ZFIN|ZDB-GENE-060224-1 - symbol:hnrnpa3 "heterogeneous nu... 511 5.2e-49 1
UNIPROTKB|F1RX74 - symbol:HNRNPA2B1 "Uncharacterized prot... 511 5.2e-49 1
RGD|1310403 - symbol:Hnrnpa2b1 "heterogeneous nuclear rib... 510 6.7e-49 1
UNIPROTKB|E2RFV7 - symbol:HNRNPA3 "Uncharacterized protei... 504 2.9e-48 1
UNIPROTKB|P51991 - symbol:HNRNPA3 "Heterogeneous nuclear ... 504 2.9e-48 1
UNIPROTKB|F2Z5B4 - symbol:HNRNPA3 "Uncharacterized protei... 504 2.9e-48 1
RGD|2321074 - symbol:LOC100360986 "mCG1035404-like" speci... 504 2.9e-48 1
RGD|727807 - symbol:Hnrnpa3 "heterogeneous nuclear ribonu... 504 2.9e-48 1
UNIPROTKB|E1BEG2 - symbol:HNRNPA3 "Uncharacterized protei... 504 2.9e-48 1
UNIPROTKB|E7EWI9 - symbol:HNRNPA3 "Heterogeneous nuclear ... 504 2.9e-48 1
UNIPROTKB|F1LNG4 - symbol:Hnrnpa3 "Heterogeneous nuclear ... 504 2.9e-48 1
UNIPROTKB|D4A491 - symbol:D4A491 "Uncharacterized protein... 502 4.7e-48 1
UNIPROTKB|D4A1X0 - symbol:D4A1X0 "Uncharacterized protein... 496 2.0e-47 1
UNIPROTKB|F1M2S4 - symbol:F1M2S4 "Uncharacterized protein... 496 2.0e-47 1
UNIPROTKB|D4A6A2 - symbol:D4A6A2 "Uncharacterized protein... 489 1.1e-46 1
UNIPROTKB|D4AD23 - symbol:D4AD23 "Uncharacterized protein... 489 1.1e-46 1
UNIPROTKB|F1M460 - symbol:F1M460 "Uncharacterized protein... 488 1.4e-46 1
UNIPROTKB|G5E5V7 - symbol:G5E5V7 "Uncharacterized protein... 483 4.8e-46 1
UNIPROTKB|F1N4K3 - symbol:F1N4K3 "Uncharacterized protein... 476 2.7e-45 1
UNIPROTKB|F1M6U1 - symbol:F1M6U1 "Uncharacterized protein... 472 7.1e-45 1
UNIPROTKB|E9PSU5 - symbol:E9PSU5 "Uncharacterized protein... 471 9.1e-45 1
UNIPROTKB|F1SA35 - symbol:LOC100737421 "Uncharacterized p... 468 1.9e-44 1
UNIPROTKB|F1PGQ0 - symbol:F1PGQ0 "Uncharacterized protein... 467 2.4e-44 1
UNIPROTKB|F1M5N1 - symbol:F1M5N1 "Uncharacterized protein... 467 2.4e-44 1
UNIPROTKB|F1PVY3 - symbol:F1PVY3 "Uncharacterized protein... 464 5.0e-44 1
UNIPROTKB|E2R5N6 - symbol:E2R5N6 "Uncharacterized protein... 462 8.1e-44 1
UNIPROTKB|D4A2D2 - symbol:D4A2D2 "Uncharacterized protein... 462 8.1e-44 1
UNIPROTKB|F1N3T3 - symbol:F1N3T3 "Uncharacterized protein... 456 3.5e-43 1
UNIPROTKB|F1Q2T4 - symbol:F1Q2T4 "Uncharacterized protein... 456 3.5e-43 1
ZFIN|ZDB-GENE-030131-6154 - symbol:hnrnpa0b "heterogeneou... 450 1.5e-42 1
ZFIN|ZDB-GENE-030131-618 - symbol:hnrnpa0l "heterogeneous... 447 3.2e-42 1
WB|WBGene00001999 - symbol:hrp-1 species:6239 "Caenorhabd... 446 4.0e-42 1
ZFIN|ZDB-GENE-030131-2249 - symbol:hnrnpa0a "heterogeneou... 446 4.0e-42 1
UNIPROTKB|D4A8U2 - symbol:D4A8U2 "Uncharacterized protein... 446 4.0e-42 1
UNIPROTKB|F1M6S2 - symbol:F1M6S2 "Uncharacterized protein... 445 5.2e-42 1
UNIPROTKB|F1SCL3 - symbol:LOC100522980 "Uncharacterized p... 444 6.6e-42 1
UNIPROTKB|F1SCM6 - symbol:LOC100522063 "Uncharacterized p... 444 6.6e-42 1
UNIPROTKB|F1M6C7 - symbol:F1M6C7 "Uncharacterized protein... 444 6.6e-42 1
UNIPROTKB|E2RJI3 - symbol:LOC608729 "Uncharacterized prot... 440 1.7e-41 1
UNIPROTKB|F1LUM4 - symbol:F1LUM4 "Uncharacterized protein... 434 7.5e-41 1
UNIPROTKB|E2RF95 - symbol:E2RF95 "Uncharacterized protein... 434 7.5e-41 1
UNIPROTKB|F1M117 - symbol:F1M117 "Uncharacterized protein... 433 9.6e-41 1
UNIPROTKB|F1M5L3 - symbol:F1M5L3 "Uncharacterized protein... 433 9.6e-41 1
UNIPROTKB|D4A6Z0 - symbol:D4A6Z0 "Uncharacterized protein... 432 1.2e-40 1
UNIPROTKB|F1LYN9 - symbol:F1LYN9 "Uncharacterized protein... 431 1.6e-40 1
UNIPROTKB|E2RJS6 - symbol:E2RJS6 "Uncharacterized protein... 430 2.0e-40 1
UNIPROTKB|F1LZZ2 - symbol:F1LZZ2 "Uncharacterized protein... 421 1.8e-39 1
UNIPROTKB|F1N235 - symbol:F1N235 "Uncharacterized protein... 419 2.9e-39 1
UNIPROTKB|F1MW51 - symbol:F1MW51 "Uncharacterized protein... 419 2.9e-39 1
UNIPROTKB|D4AB76 - symbol:D4AB76 "Uncharacterized protein... 418 3.7e-39 1
UNIPROTKB|F1PQB0 - symbol:HNRNPA1L2 "Uncharacterized prot... 413 1.3e-38 1
UNIPROTKB|F6RSR1 - symbol:HNRNPA0 "Uncharacterized protei... 410 2.6e-38 1
UNIPROTKB|E2RBV8 - symbol:HNRNPA0 "Uncharacterized protei... 410 2.6e-38 1
UNIPROTKB|Q13151 - symbol:HNRNPA0 "Heterogeneous nuclear ... 410 2.6e-38 1
UNIPROTKB|F1RH94 - symbol:HNRNPA0 "Uncharacterized protei... 410 2.6e-38 1
UNIPROTKB|F1LVU1 - symbol:F1LVU1 "Uncharacterized protein... 409 3.4e-38 1
UNIPROTKB|F1LW71 - symbol:F1LW71 "Uncharacterized protein... 409 3.4e-38 1
UNIPROTKB|E2RJS4 - symbol:E2RJS4 "Uncharacterized protein... 406 7.0e-38 1
MGI|MGI:1924384 - symbol:Hnrnpa0 "heterogeneous nuclear r... 404 1.1e-37 1
UNIPROTKB|F1LYB2 - symbol:F1LYB2 "Uncharacterized protein... 402 1.9e-37 1
UNIPROTKB|D4ACP9 - symbol:D4ACP9 "Uncharacterized protein... 402 1.9e-37 1
UNIPROTKB|F1M7F0 - symbol:F1M7F0 "Uncharacterized protein... 402 1.9e-37 1
UNIPROTKB|F1M0H6 - symbol:F1M0H6 "Uncharacterized protein... 398 4.9e-37 1
UNIPROTKB|F1NCI5 - symbol:HNRNPA0 "Uncharacterized protei... 397 6.3e-37 1
WARNING: Descriptions of 1134 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0004237 [details] [associations]
symbol:Hrb87F "Heterogeneous nuclear ribonucleoprotein at
87F" species:7227 "Drosophila melanogaster" [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0005703
"polytene chromosome puff" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035062 "omega speckle" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0007067 "mitosis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
GO:GO:0005737 GO:GO:0007067 GO:GO:0022008 GO:GO:0000166
GO:GO:0043565 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000785
GO:GO:0030529 eggNOG:COG0724 GO:GO:0005703 GO:GO:0000381
GeneTree:ENSGT00700000104255 KO:K12741 EMBL:X54803 EMBL:X58183
EMBL:X58184 EMBL:X59691 EMBL:X62636 EMBL:BT012315 PIR:A41732
PIR:S22315 RefSeq:NP_001163602.1 RefSeq:NP_476806.1
RefSeq:NP_476807.1 UniGene:Dm.1711 ProteinModelPortal:P48810
SMR:P48810 IntAct:P48810 MINT:MINT-296059 STRING:P48810
PaxDb:P48810 EnsemblMetazoa:FBtr0082851 EnsemblMetazoa:FBtr0300590
EnsemblMetazoa:FBtr0310621 GeneID:48535 KEGG:dme:Dmel_CG12749
CTD:48535 FlyBase:FBgn0004237 InParanoid:P48810 OMA:MENRDAK
OrthoDB:EOG46WWRF PhylomeDB:P48810 ChiTaRS:Hrb87F GenomeRNAi:48535
NextBio:839451 Bgee:P48810 GermOnline:CG12749 GO:GO:0035062
Uniprot:P48810
Length = 385
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 116/166 (69%), Positives = 137/166 (82%)
Query: 5 YDDSK-CTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
YDD + TEPE LRK+FIGGLDYRTTD+ L+A FE+WG IVDVVVMKDP TKRSRGFGFI
Sbjct: 11 YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD- 122
TYS++ M+D+A + RPH IDGR VE KRAVPR EI P A ATVKK+FVGGL+D +++
Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEEC 130
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF FG I SVN+V++K+TG KRGFAFIEF+DYD VDKI+L K
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQK 176
Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 27/98 (27%), Positives = 56/98 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + +++K+F+GGL +E L+ +F+ +G+IV V ++ D T + RGF F
Sbjct: 101 PRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAF 160
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
I + + VD + + H+I + ++ K+A+ + ++ +
Sbjct: 161 IEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDR 198
>FB|FBgn0001215 [details] [associations]
symbol:Hrb98DE "Heterogeneous nuclear ribonucleoprotein at
98DE" species:7227 "Drosophila melanogaster" [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0003729
"mRNA binding" evidence=ISS;NAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001745 "compound eye morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005703 "polytene chromosome
puff" evidence=IDA] [GO:0033119 "negative regulation of RNA
splicing" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0036099 "female germ-line
stem cell maintenance" evidence=IMP] [GO:0048027 "mRNA 5'-UTR
binding" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
GO:GO:0005634 GO:GO:0000166 GO:GO:0043565 Gene3D:3.30.70.330
GO:GO:0048477 GO:GO:0048027 GO:GO:0030529 GO:GO:0033119
GO:GO:0045727 eggNOG:COG0724 GO:GO:0005703 GO:GO:0000381
GeneTree:ENSGT00700000104255 GO:GO:0036099 KO:K12741
OrthoDB:EOG46WWRF EMBL:M15766 EMBL:M25545 EMBL:M28871 EMBL:M28872
EMBL:M33955 EMBL:M31560 EMBL:M28870 EMBL:AY061448 PIR:A26459
RefSeq:NP_524543.1 RefSeq:NP_733249.1 RefSeq:NP_733250.1
RefSeq:NP_733251.1 RefSeq:NP_733252.1 RefSeq:NP_733253.1
UniGene:Dm.7147 ProteinModelPortal:P07909 SMR:P07909 DIP:DIP-19217N
IntAct:P07909 MINT:MINT-764040 STRING:P07909 PaxDb:P07909
PRIDE:P07909 EnsemblMetazoa:FBtr0085300 EnsemblMetazoa:FBtr0085301
GeneID:43385 KEGG:dme:Dmel_CG9983 CTD:43385 FlyBase:FBgn0001215
InParanoid:P07909 OMA:INIVIDK PhylomeDB:P07909 ChiTaRS:Hrb98DE
GenomeRNAi:43385 NextBio:833644 Bgee:P07909 GermOnline:CG9983
Uniprot:P07909
Length = 365
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 110/165 (66%), Positives = 131/165 (79%)
Query: 5 YDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
+ TEPE +RK+FIGGLDYRTTDE+L+A FE+WG IVDVVVMKDP TKRSRGFGFIT
Sbjct: 19 FPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 78
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDL 123
YS + M+D+A +RPH IDGRVVE KRAVPR +I P A ATVKK+FVG LKD +E +
Sbjct: 79 YSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSI 138
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
R+YF FG I +N+V +KETG KRGFAF+EF+DYD VDK+VL K
Sbjct: 139 RDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK 183
Score = 157 (60.3 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 27/93 (29%), Positives = 56/93 (60%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D +++K+F+G L ++S++ +F+ +G IVD+ ++ D T + RGF F
Sbjct: 108 PRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAF 167
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ + + VD + + H ++G++V+ K+A+P+
Sbjct: 168 VEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 200
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTI 133
M N N +G P+D I +PE ++K+F+GGL + D+ L+ +F ++G I
Sbjct: 1 MVNSNQNQNGNSNGHDDDFPQDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNI 57
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
V ++ + T RGF FI ++ ++D+ S+ + R VE
Sbjct: 58 VDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVE 102
>ZFIN|ZDB-GENE-040426-1546 [details] [associations]
symbol:zgc:66127 "zgc:66127" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-1546 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00700000104376 EMBL:CABZ01055593
EMBL:CABZ01000532 EMBL:CABZ01000533 EMBL:CABZ01000534
EMBL:CABZ01000536 EMBL:CABZ01000539 EMBL:CABZ01000540
EMBL:CABZ01085064 EMBL:CABZ01085065 EMBL:CABZ01085066
EMBL:CABZ01085067 EMBL:CABZ01085068 EMBL:CABZ01088246
EMBL:CABZ01088247 EMBL:CABZ01088248 EMBL:CABZ01088249
EMBL:CABZ01088250 EMBL:CABZ01088251 EMBL:CABZ01092715
EMBL:CABZ01092716 EMBL:CABZ01092717 EMBL:CABZ01092718
IPI:IPI00971841 Ensembl:ENSDART00000082448 Bgee:E7FAB3
Uniprot:E7FAB3
Length = 411
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 100/158 (63%), Positives = 123/158 (77%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL+A FEQWG + D VVM+DP TKRSRGFGF+TYS V
Sbjct: 33 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEV 92
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGR VE KRAV R++ KP A++TVKKMFVGG+K D +E+ LREYF QF
Sbjct: 93 DAAMDARPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQF 152
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+ VN++T K + +RGFAFI F+D+D VD+IV+ K
Sbjct: 153 GKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQK 190
Score = 166 (63.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 32/102 (31%), Positives = 61/102 (59%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D SK +++K+F+GG+ T +E L+ +F Q+G+I +V +M + + + RGF FI
Sbjct: 116 REDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEKNSDKRRGFAFI 175
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANA 105
T+ + VD + + H ++G E ++A+ R+E+ + N+
Sbjct: 176 TFDDHDAVDRIVIQKYHTVNGHNCEVRKALSREEMNRVSMNS 217
>UNIPROTKB|Q5ZME1 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0043047 "single-stranded telomeric DNA binding"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0097157 GO:GO:0048025 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF CTD:3181
GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS EMBL:AC140791
EMBL:AJ719443 IPI:IPI00651336 RefSeq:NP_001026156.1
UniGene:Gga.22131 SMR:Q5ZME1 IntAct:Q5ZME1 STRING:Q5ZME1
Ensembl:ENSGALT00000017975 GeneID:420627 KEGG:gga:420627
InParanoid:Q5ZME1 NextBio:20823513 Uniprot:Q5ZME1
Length = 349
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 97/168 (57%), Positives = 130/168 (77%)
Query: 3 PRYD-DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D +S E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFG
Sbjct: 2 PRGDRESDWREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFG 61
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEE 120
F+T+S VD AM+ RPH IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE
Sbjct: 62 FVTFSSMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEE 121
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LR+YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 122 HHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 169
Score = 150 (57.9 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 26/84 (30%), Positives = 53/84 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 106 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H I+G E ++A+ R E+
Sbjct: 166 VLQKYHTINGHNAEVRKALSRQEM 189
>FB|FBgn0004903 [details] [associations]
symbol:Rb97D "Ribonuclear protein at 97D" species:7227
"Drosophila melanogaster" [GO:0007286 "spermatid development"
evidence=IMP] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0007275
GO:GO:0007286 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
eggNOG:COG0724 GeneTree:ENSGT00700000104255 EMBL:L02106
EMBL:BT001320 PIR:S33679 PIR:S33680 RefSeq:NP_001014671.1
RefSeq:NP_001014672.1 RefSeq:NP_001014673.1 RefSeq:NP_001014674.1
RefSeq:NP_001014675.1 RefSeq:NP_001014676.1 RefSeq:NP_001014677.1
RefSeq:NP_524520.1 RefSeq:NP_733172.1 UniGene:Dm.22918
ProteinModelPortal:Q02926 SMR:Q02926 DIP:DIP-18137N IntAct:Q02926
MINT:MINT-957540 STRING:Q02926 PaxDb:Q02926 PRIDE:Q02926
EnsemblMetazoa:FBtr0085093 EnsemblMetazoa:FBtr0100337
EnsemblMetazoa:FBtr0100339 EnsemblMetazoa:FBtr0100340 GeneID:43231
KEGG:dme:Dmel_CG6354 CTD:43231 FlyBase:FBgn0004903
InParanoid:Q02926 OMA:DICELEH OrthoDB:EOG43N5VC PhylomeDB:Q02926
ChiTaRS:Rb97D GenomeRNAi:43231 NextBio:832835 Bgee:Q02926
GermOnline:CG6354 Uniprot:Q02926
Length = 471
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 100/166 (60%), Positives = 127/166 (76%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R +D C E E LRK+FIGGL TT+E+L+ F+ QWG++VDVVVM+D TKRSRGFGFI
Sbjct: 20 REEDDIC-ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFI 78
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD- 122
TY+++ MVD A NRPH IDG+ VE KRA+PR E E N +VKK+FVGGLKD +++
Sbjct: 79 TYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEEC 138
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD VDK +L K
Sbjct: 139 LREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 134 (52.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
S++K+F+GGL +E L+ +F Q+G +V V ++ D T + RGF F+ + + VD A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 75 MSNRPHNIDGRVVETKRAV 93
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
>ZFIN|ZDB-GENE-030912-14 [details] [associations]
symbol:hnrnpa1 "heterogeneous nuclear
ribonucleoprotein A1" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030912-14 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 eggNOG:COG0724
HSSP:P09651 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF CTD:3178 EMBL:BC044442 IPI:IPI00500189
RefSeq:NP_956398.1 UniGene:Dr.67768 ProteinModelPortal:Q803K3
SMR:Q803K3 STRING:Q803K3 PRIDE:Q803K3 GeneID:378453 KEGG:dre:378453
InParanoid:Q803K3 NextBio:20813776 ArrayExpress:Q803K3 Bgee:Q803K3
Uniprot:Q803K3
Length = 422
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 97/158 (61%), Positives = 123/158 (77%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+A FEQWG + D VVMKDP TKRSRGFGF+TYS V
Sbjct: 28 EPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDEV 87
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
+ +M RPH +DGR+VE KRAV R++ KP A+ TVKK+FVGG+KD EE+ LR+YF QF
Sbjct: 88 NASMDARPHKVDGRLVEPKRAVSREDSSKPFAHTTVKKIFVGGIKDDTEENHLRDYFDQF 147
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE V ++ + +TG KRGFAF+ F+D+D VD+IV+ K
Sbjct: 148 GKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQK 185
Score = 153 (58.9 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 30/95 (31%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D SK +++K+F+GG+ T + L+ +F+Q+G+I V +M D T RGF F+
Sbjct: 111 REDSSKPFAHTTVKKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFV 170
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H ++G E ++A+ + E+
Sbjct: 171 TFDDHDSVDRIVIQKYHTVNGHNCEVRKALSKQEM 205
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 99 GKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 157
G+P ++K+F+GGL + DD LR +F Q+GT+ ++ + T RGF F+ ++
Sbjct: 24 GQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSS 83
Query: 158 YDVVD 162
D V+
Sbjct: 84 VDEVN 88
>UNIPROTKB|F1Q3G7 [details] [associations]
symbol:HNRNPA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013
GO:GO:0051168 GO:GO:0000380 GO:GO:0051170
GeneTree:ENSGT00550000074566 EMBL:AAEX03014967
Ensembl:ENSCAFT00000010627 OMA:QAQQGGW Uniprot:F1Q3G7
Length = 384
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 90 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 150 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 187
Score = 148 (57.2 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 124 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 183
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 184 VIQKYHTVNGHNCEVRKALSKQEMASASSS 213
Score = 110 (43.8 bits), Expect = 0.00032, P = 0.00032
Identities = 25/83 (30%), Positives = 46/83 (55%)
Query: 84 GRVVETKRAVPRDEIGKPEANAT---VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMV 139
GR + +A RD+ +P++ ++K+F+GGL + D+ LR +F Q+GT+ ++
Sbjct: 8 GRSLPMPKARRRDKKARPKSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVM 67
Query: 140 TNKETGAKRGFAFIEFNDYDVVD 162
+ T RGF F+ + + VD
Sbjct: 68 RDPNTKRSRGFGFVTYATVEEVD 90
>UNIPROTKB|Q5RBU8 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9601 "Pongo abelii" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0030529
HOVERGEN:HBG002295 CTD:3181 KO:K13158 EMBL:CR858535
RefSeq:NP_001127331.1 UniGene:Pab.19213 HSSP:P22626
ProteinModelPortal:Q5RBU8 SMR:Q5RBU8 PRIDE:Q5RBU8 GeneID:100174392
KEGG:pon:100174392 InParanoid:Q5RBU8 Uniprot:Q5RBU8
Length = 353
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 94/163 (57%), Positives = 128/163 (78%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 152 (58.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 26/90 (28%), Positives = 57/90 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 170 VLQKHHTINGHNAEVRKALSRQEMQEVQSS 199
>UNIPROTKB|F1Q1K6 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 OMA:HYSARTS EMBL:AAEX03009384
Ensembl:ENSCAFT00000004622 Uniprot:F1Q1K6
Length = 353
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 94/163 (57%), Positives = 128/163 (78%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 151 (58.2 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 26/90 (28%), Positives = 57/90 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQEMQEVQSS 199
>UNIPROTKB|P22626 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0097157 "pre-mRNA intronic
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0006397 "mRNA processing" evidence=IDA]
[GO:0050658 "RNA transport" evidence=IDA] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000398
GO:GO:0071013 GO:GO:0050658 eggNOG:COG0724 GO:GO:0043047
HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
HPA:HPA001666 CTD:3181 KO:K13158 OMA:HYSARTS EMBL:M29064
EMBL:M29065 EMBL:U09123 EMBL:U09120 EMBL:U09121 EMBL:U09122
EMBL:D28877 EMBL:AK289429 IPI:IPI00396378 IPI:IPI00414696
PIR:A56845 RefSeq:NP_002128.1 RefSeq:NP_112533.1 UniGene:Hs.487774
PDB:1X4B PDBsum:1X4B ProteinModelPortal:P22626 SMR:P22626
IntAct:P22626 MINT:MINT-4998934 STRING:P22626 PhosphoSite:P22626
DMDM:133257 REPRODUCTION-2DPAGE:IPI00396378
REPRODUCTION-2DPAGE:IPI00414696 REPRODUCTION-2DPAGE:P22626
SWISS-2DPAGE:P22626 UCD-2DPAGE:P22626 PaxDb:P22626 PRIDE:P22626
Ensembl:ENST00000354667 Ensembl:ENST00000356674
Ensembl:ENST00000360787 GeneID:3181 KEGG:hsa:3181 UCSC:uc003sxr.4
UCSC:uc003sxs.4 GeneCards:GC07M026229 HGNC:HGNC:5033 HPA:CAB012403
MIM:600124 neXtProt:NX_P22626 PharmGKB:PA162391140 PhylomeDB:P22626
ChiTaRS:HNRNPA2B1 EvolutionaryTrace:P22626 GenomeRNAi:3181
NextBio:12622 PMAP-CutDB:P22626 Bgee:P22626 CleanEx:HS_HNRNPA2B1
Genevestigator:P22626 GermOnline:ENSG00000122566 Uniprot:P22626
Length = 353
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 94/163 (57%), Positives = 128/163 (78%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 151 (58.2 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 26/90 (28%), Positives = 57/90 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQEMQEVQSS 199
>MGI|MGI:104819 [details] [associations]
symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein
A2/B1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=ISO]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IMP;IDA] [GO:0050658 "RNA transport" evidence=ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:104819 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0097157 GO:GO:0050658 GO:GO:0048025
eggNOG:COG0724 GO:GO:0043047 HOVERGEN:HBG002295 OrthoDB:EOG4HQDKF
CTD:3181 GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS
ChiTaRS:HNRNPA2B1 EMBL:AF406651 EMBL:AF452567 EMBL:AF073990
EMBL:AF073993 EMBL:AK089012 EMBL:AK137214 EMBL:BC059107
EMBL:BC141253 IPI:IPI00405058 IPI:IPI00622847 IPI:IPI00828488
RefSeq:NP_058086.2 RefSeq:NP_872591.1 RefSeq:XP_001473875.2
UniGene:Mm.155896 ProteinModelPortal:O88569 SMR:O88569
IntAct:O88569 STRING:O88569 PhosphoSite:O88569
REPRODUCTION-2DPAGE:IPI00405058 REPRODUCTION-2DPAGE:O88569
SWISS-2DPAGE:O88569 PaxDb:O88569 PRIDE:O88569
Ensembl:ENSMUST00000069949 Ensembl:ENSMUST00000090002
Ensembl:ENSMUST00000114459 GeneID:100045191 GeneID:53379
KEGG:mmu:100045191 KEGG:mmu:53379 UCSC:uc009bxm.1 UCSC:uc009bxn.1
NextBio:458663 Bgee:O88569 CleanEx:MM_HNRNPA2B1
Genevestigator:O88569 GermOnline:ENSMUSG00000004980 Uniprot:O88569
Length = 353
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 94/163 (57%), Positives = 128/163 (78%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 151 (58.2 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 26/90 (28%), Positives = 57/90 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQEMQEVQSS 199
>UNIPROTKB|F1LM82 [details] [associations]
symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:1310403 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00700000104376 IPI:IPI00923129
Ensembl:ENSRNOT00000015325 ArrayExpress:F1LM82 Uniprot:F1LM82
Length = 312
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 94/163 (57%), Positives = 128/163 (78%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 10 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 69
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 70 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 129
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 130 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 172
Score = 151 (58.2 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 26/90 (28%), Positives = 57/90 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 109 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 168
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 169 VLQKYHTINGHNAEVRKALSRQEMQEVQSS 198
>UNIPROTKB|F1LNF1 [details] [associations]
symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1310403
GO:GO:0005730 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0071013 GO:GO:0050658 GO:GO:0043047
GeneTree:ENSGT00700000104376 OMA:HYSARTS IPI:IPI00867934
ProteinModelPortal:F1LNF1 Ensembl:ENSRNOT00000015152
ArrayExpress:F1LNF1 Uniprot:F1LNF1
Length = 352
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 94/163 (57%), Positives = 128/163 (78%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 10 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 69
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 70 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 129
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 130 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 172
Score = 151 (58.2 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 26/90 (28%), Positives = 57/90 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 109 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 168
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 169 VLQKYHTINGHNAEVRKALSRQEMQEVQSS 198
>UNIPROTKB|P09867 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003697
GO:GO:0030529 GO:GO:0051028 GO:GO:0071013 GO:GO:0051168
eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
Pfam:PF11627 EMBL:BC105413 IPI:IPI00692235 PIR:A27241
RefSeq:NP_001039376.1 UniGene:Bt.88002 ProteinModelPortal:P09867
SMR:P09867 STRING:P09867 PRIDE:P09867 Ensembl:ENSBTAT00000002033
GeneID:505093 KEGG:bta:505093 CTD:3178 GeneTree:ENSGT00550000074566
OMA:IEVEIMT BindingDB:P09867 NextBio:20866978 Uniprot:P09867
Length = 320
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|E2QYP1 [details] [associations]
symbol:HNRNPA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:AAEX03014967
ProteinModelPortal:E2QYP1 PRIDE:E2QYP1 Ensembl:ENSCAFT00000010628
NextBio:20853043 Uniprot:E2QYP1
Length = 373
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|F8VRQ1 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01021093 ProteinModelPortal:F8VRQ1 SMR:F8VRQ1 PRIDE:F8VRQ1
Ensembl:ENST00000551133 ArrayExpress:F8VRQ1 Bgee:F8VRQ1
Uniprot:F8VRQ1
Length = 307
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|F8VSB5 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01022218 ProteinModelPortal:F8VSB5 SMR:F8VSB5 PRIDE:F8VSB5
Ensembl:ENST00000552494 ArrayExpress:F8VSB5 Bgee:F8VSB5
Uniprot:F8VSB5
Length = 306
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|F8VXY0 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01022801 ProteinModelPortal:F8VXY0 SMR:F8VXY0 PRIDE:F8VXY0
Ensembl:ENST00000547617 ArrayExpress:F8VXY0 Bgee:F8VXY0
Uniprot:F8VXY0
Length = 304
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|F8VZ49 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 EMBL:AC078778
HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022460
ProteinModelPortal:F8VZ49 SMR:F8VZ49 PRIDE:F8VZ49
Ensembl:ENST00000548688 ArrayExpress:F8VZ49 Bgee:F8VZ49
Uniprot:F8VZ49
Length = 231
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 28 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 87
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 88 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 147
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 148 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 185
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 122 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 181
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 182 VIQKYHTVNGHNCEVRKALSKQEMASASSS 211
>UNIPROTKB|F8W1S7 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01021812 ProteinModelPortal:F8W1S7 SMR:F8W1S7 PRIDE:F8W1S7
Ensembl:ENST00000552591 ArrayExpress:F8W1S7 Bgee:F8W1S7
Uniprot:F8W1S7
Length = 330
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|F8W6I7 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01021324 ProteinModelPortal:F8W6I7 SMR:F8W6I7 PRIDE:F8W6I7
Ensembl:ENST00000330752 ArrayExpress:F8W6I7 Bgee:F8W6I7
Uniprot:F8W6I7
Length = 320
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|P09651 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0006397 "mRNA processing" evidence=TAS] [GO:0003727
"single-stranded RNA binding" evidence=IC] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006405 "RNA export from nucleus" evidence=IC]
[GO:0051170 "nuclear import" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0051168 "nuclear
export" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] Reactome:REACT_71
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0019048 GO:GO:0005654
GO:GO:0005730 GO:GO:0000166 Reactome:REACT_1675 GO:GO:0003727
Gene3D:3.30.70.330 EMBL:CH471054 GO:GO:0045111 GO:GO:0003697
Pathway_Interaction_DB:ar_pathway GO:GO:0051028 GO:GO:0000398
GO:GO:0071013 eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295
GO:GO:0051170 GO:GO:0006405 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF CTD:3178 OMA:IEVEIMT EMBL:X12671 EMBL:X06747
EMBL:X79536 EMBL:AK291113 EMBL:AC078778 EMBL:BC002355 EMBL:BC009600
EMBL:BC012158 EMBL:BC033714 EMBL:BC052296 EMBL:BC070315
EMBL:BC074502 EMBL:BC103707 EMBL:X04347 IPI:IPI00215965
IPI:IPI00465365 IPI:IPI00797148 PIR:S02061 PIR:S12520
RefSeq:NP_002127.1 RefSeq:NP_112420.1 UniGene:Hs.546261
UniGene:Hs.655424 PDB:1HA1 PDB:1L3K PDB:1PGZ PDB:1PO6 PDB:1U1K
PDB:1U1L PDB:1U1M PDB:1U1N PDB:1U1O PDB:1U1P PDB:1U1Q PDB:1U1R
PDB:1UP1 PDB:2H4M PDB:2LYV PDB:2UP1 PDBsum:1HA1 PDBsum:1L3K
PDBsum:1PGZ PDBsum:1PO6 PDBsum:1U1K PDBsum:1U1L PDBsum:1U1M
PDBsum:1U1N PDBsum:1U1O PDBsum:1U1P PDBsum:1U1Q PDBsum:1U1R
PDBsum:1UP1 PDBsum:2H4M PDBsum:2LYV PDBsum:2UP1 DisProt:DP00324
ProteinModelPortal:P09651 SMR:P09651 DIP:DIP-29338N IntAct:P09651
MINT:MINT-1035550 STRING:P09651 PhosphoSite:P09651 DMDM:288558857
SWISS-2DPAGE:P09651 PaxDb:P09651 PRIDE:P09651
Ensembl:ENST00000340913 Ensembl:ENST00000546500
Ensembl:ENST00000547276 Ensembl:ENST00000547566 GeneID:3178
KEGG:hsa:3178 UCSC:uc001sfl.3 UCSC:uc001sfm.3 UCSC:uc001sfn.3
GeneCards:GC12P054674 H-InvDB:HIX0032087 H-InvDB:HIX0040127
H-InvDB:HIX0202582 HGNC:HGNC:5031 HPA:CAB010894 HPA:HPA001666
MIM:164017 neXtProt:NX_P09651 PharmGKB:PA162391113
InParanoid:P09651 PhylomeDB:P09651 BindingDB:P09651
ChEMBL:CHEMBL1955709 ChiTaRS:HNRNPA1 EvolutionaryTrace:P09651
GenomeRNAi:3178 NextBio:12614 ArrayExpress:P09651 Bgee:P09651
CleanEx:HS_HNRNPA1 Genevestigator:P09651 GermOnline:ENSG00000135486
Uniprot:P09651
Length = 372
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|Q06A94 [details] [associations]
symbol:HNRNPA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013 GO:GO:0051168
eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 OMA:IEVEIMT
EMBL:CU694683 EMBL:DQ972970 RefSeq:NP_001070686.1 UniGene:Ssc.49600
SMR:Q06A94 Ensembl:ENSSSCT00000000309 GeneID:768103 KEGG:ssc:768103
Uniprot:Q06A94
Length = 320
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|A5A6H4 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9598 "Pan troglodytes" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
GeneTree:ENSGT00550000074566 OMA:IEVEIMT EMBL:AB222102
EMBL:AL954201 RefSeq:NP_001091892.1 RefSeq:NP_001184040.1
RefSeq:XP_003318234.1 RefSeq:XP_003954396.1 UniGene:Ptr.6288
UniGene:Ptr.6435 ProteinModelPortal:A5A6H4 SMR:A5A6H4 PRIDE:A5A6H4
Ensembl:ENSPTRT00000010845 GeneID:100615525 GeneID:739306
GeneID:747284 KEGG:ptr:100615525 KEGG:ptr:739306 KEGG:ptr:747284
CTD:739306 InParanoid:A5A6H4 BindingDB:A5A6H4 NextBio:20906554
Uniprot:A5A6H4
Length = 320
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>MGI|MGI:104820 [details] [associations]
symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051168 "nuclear export" evidence=ISO] [GO:0051170 "nuclear
import" evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:104820 GO:GO:0005737
GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0003697 GO:GO:0051028 GO:GO:0051168
eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 ChiTaRS:HNRNPA1
EMBL:M99167 EMBL:D86729 EMBL:D86728 EMBL:AK007802 EMBL:AK088308
EMBL:AK131999 EMBL:AK135391 EMBL:AK161730 EMBL:AK166901
EMBL:AK167161 EMBL:AK167810 EMBL:AK167913 EMBL:AK168420
EMBL:AK168531 EMBL:BC080675 EMBL:BC083136 IPI:IPI00553777
IPI:IPI00817004 PIR:A44485 RefSeq:NP_034577.1 UniGene:Mm.237064
UniGene:Mm.432031 ProteinModelPortal:P49312 SMR:P49312
IntAct:P49312 STRING:P49312 PhosphoSite:P49312 PaxDb:P49312
PRIDE:P49312 Ensembl:ENSMUST00000087351 GeneID:15382 KEGG:mmu:15382
UCSC:uc007xxp.1 UCSC:uc012aah.1 BindingDB:P49312 NextBio:288050
Bgee:P49312 CleanEx:MM_HNRNPA1 Genevestigator:P49312
GermOnline:ENSMUSG00000058922 Uniprot:P49312
Length = 320
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|D4ACJ7 [details] [associations]
symbol:Hnrnpa1 "RCG50547, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69234 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013 GO:GO:0051168
EMBL:CH474035 GO:GO:0000380 GO:GO:0051170 OrthoDB:EOG4HQDKF
OMA:IEVEIMT IPI:IPI00781944 SMR:D4ACJ7 Ensembl:ENSRNOT00000055284
Uniprot:D4ACJ7
Length = 373
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|D4ACJ8 [details] [associations]
symbol:Hnrnpa1 "Heterogeneous nuclear ribonucleoprotein A1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 IPI:IPI00780243 Ensembl:ENSRNOT00000055282
ArrayExpress:D4ACJ8 Uniprot:D4ACJ8
Length = 268
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>UNIPROTKB|Q5I0M7 [details] [associations]
symbol:Hnrnpa1 "Hnrpa1 protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CH474035 eggNOG:COG0724 HOVERGEN:HBG002295 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 IPI:IPI00421500
UniGene:Rn.25771 EMBL:BC088150 SMR:Q5I0M7 STRING:Q5I0M7
Ensembl:ENSRNOT00000055285 Genevestigator:Q5I0M7 Uniprot:Q5I0M7
Length = 320
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 148 (57.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>RGD|69234 [details] [associations]
symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO;ISS;TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISO]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0045111
"intermediate filament cytoskeleton" evidence=ISO] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051168 "nuclear export"
evidence=ISO;ISS] [GO:0051170 "nuclear import" evidence=ISO;ISS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:69234 GO:GO:0005737 GO:GO:0005654 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0003697 GO:GO:0016070 GO:GO:0051028
GO:GO:0051168 eggNOG:COG0724 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 InterPro:IPR021662 Pfam:PF11627
CTD:3178 EMBL:M12156 IPI:IPI00421500 PIR:A38304 RefSeq:NP_058944.1
UniGene:Rn.25771 ProteinModelPortal:P04256 SMR:P04256 IntAct:P04256
STRING:P04256 PhosphoSite:P04256 PRIDE:P04256 GeneID:29578
KEGG:rno:29578 UCSC:RGD:69234 NextBio:609678 ArrayExpress:P04256
Genevestigator:P04256 GermOnline:ENSRNOG00000036839 Uniprot:P04256
Length = 320
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 96/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 146 (56.5 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALCKQEMASASSS 192
>UNIPROTKB|Q9TTV2 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9490 "Saguinus oedipus" [GO:0030529
"ribonucleoprotein complex" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
GO:GO:0030529 HOVERGEN:HBG002295 HSSP:P22626 EMBL:AF192348
ProteinModelPortal:Q9TTV2 SMR:Q9TTV2 Uniprot:Q9TTV2
Length = 341
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 93/158 (58%), Positives = 128/158 (81%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL ++TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF+++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 25/90 (27%), Positives = 56/90 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +F ++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEMQEVQSS 187
>UNIPROTKB|Q2HJ60 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0043047 "single-stranded
telomeric DNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0030529 GO:GO:0097157 GO:GO:0048025
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442
OrthoDB:EOG4HQDKF EMBL:BC113298 IPI:IPI00695201
RefSeq:NP_001039440.1 UniGene:Bt.48137 ProteinModelPortal:Q2HJ60
SMR:Q2HJ60 STRING:Q2HJ60 PRIDE:Q2HJ60 Ensembl:ENSBTAT00000007527
GeneID:507564 KEGG:bta:507564 CTD:3181 GeneTree:ENSGT00700000104376
KO:K13158 OMA:HYSARTS NextBio:20868121 Uniprot:Q2HJ60
Length = 341
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 93/158 (58%), Positives = 126/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 151 (58.2 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 26/90 (28%), Positives = 57/90 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQEMQEVQSS 187
>UNIPROTKB|E1BZE6 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00812068 ProteinModelPortal:E1BZE6
Ensembl:ENSGALT00000038715 Uniprot:E1BZE6
Length = 380
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 96/158 (60%), Positives = 126/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 28 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 87
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LREYF ++
Sbjct: 88 DAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKY 147
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 148 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 185
Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 111 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFV 170
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 171 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 205
Score = 116 (45.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 86 VVETKRAVPRDEIG-KPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKE 143
V + KR R G +P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +
Sbjct: 10 VEDYKRKGRRSSQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQ 69
Query: 144 TGAKRGFAFIEFNDYDVVD 162
T RGF F+ ++ + VD
Sbjct: 70 TKRSRGFGFVTYSCVEEVD 88
>UNIPROTKB|F1NBB6 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00818847 Ensembl:ENSGALT00000029498 Uniprot:F1NBB6
Length = 310
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 96/158 (60%), Positives = 126/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 16 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LREYF ++
Sbjct: 76 DAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 136 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 173
Score = 155 (59.6 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 99 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFV 158
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 159 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 193
Score = 113 (44.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 22/70 (31%), Positives = 44/70 (62%)
Query: 95 RDEIG-KPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 152
+ ++G +P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F
Sbjct: 7 KGKVGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 66
Query: 153 IEFNDYDVVD 162
+ ++ + VD
Sbjct: 67 VTYSCVEEVD 76
>UNIPROTKB|F1P5I0 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00971390 Ensembl:ENSGALT00000015053 Uniprot:F1P5I0
Length = 288
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 96/158 (60%), Positives = 126/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 4 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AMS RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LREYF ++
Sbjct: 64 DAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 124 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 161
Score = 155 (59.6 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 87 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFV 146
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 147 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 181
Score = 111 (44.1 bits), Expect = 0.00014, P = 0.00014
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 100 KPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
+P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++
Sbjct: 1 EPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCV 60
Query: 159 DVVD 162
+ VD
Sbjct: 61 EEVD 64
>UNIPROTKB|Q32P51 [details] [associations]
symbol:HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein
A1-like 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000380 "alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 eggNOG:COG0724 HSSP:Q61474
EMBL:CH471124 EMBL:AK123159 EMBL:AL137058 EMBL:BC108266
IPI:IPI00879501 RefSeq:NP_001011724.1 RefSeq:NP_001011725.1
UniGene:Hs.447506 ProteinModelPortal:Q32P51 SMR:Q32P51
IntAct:Q32P51 STRING:Q32P51 PhosphoSite:Q32P51 DMDM:190356061
PaxDb:Q32P51 PRIDE:Q32P51 Ensembl:ENST00000342657
Ensembl:ENST00000357495 Ensembl:ENST00000398039 GeneID:144983
KEGG:hsa:144983 UCSC:uc001vgx.1 CTD:144983 GeneCards:GC13P053192
HGNC:HGNC:27067 neXtProt:NX_Q32P51 PharmGKB:PA164720701
HOGENOM:HOG000234442 InParanoid:Q32P51 KO:K12741 OMA:HYGSIVD
OrthoDB:EOG4HQDKF GenomeRNAi:144983 NextBio:85023 Bgee:Q32P51
Genevestigator:Q32P51 InterPro:IPR021662 Pfam:PF11627
Uniprot:Q32P51
Length = 320
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 95/158 (60%), Positives = 124/158 (78%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 155 (59.6 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 30/106 (28%), Positives = 60/106 (56%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKK---MFVGGLKD 117
+ + H + G E ++A+P+ E+ ++ ++ F GG D
Sbjct: 163 VIQKYHTVKGHNCEVRKALPKQEMASASSSQRGRRGSGNFGGGRGD 208
>UNIPROTKB|Q28521 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9544 "Macaca mulatta" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
EMBL:M84334 PIR:S30192 RefSeq:NP_001036248.1 UniGene:Mmu.4980
ProteinModelPortal:Q28521 SMR:Q28521 STRING:Q28521 PRIDE:Q28521
GeneID:702977 KEGG:mcc:702977 InParanoid:Q28521 NextBio:19966247
Uniprot:Q28521
Length = 320
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 95/158 (60%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D++ VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQK 166
Score = 149 (57.5 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQEMASASSS 192
>ZFIN|ZDB-GENE-060224-1 [details] [associations]
symbol:hnrnpa3 "heterogeneous nuclear
ribonucleoprotein A3" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-060224-1 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104376 EMBL:CR848724 IPI:IPI00863016
UniGene:Dr.85855 SMR:B0V1I7 Ensembl:ENSDART00000135273 OMA:IETIDIM
Uniprot:B0V1I7
Length = 312
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 97/163 (59%), Positives = 124/163 (76%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
DSK EPE LRK+FIGGL + TT++SL+A FEQWG++ D VVM+DP KRSRGFGF+TYS
Sbjct: 5 DSK--EPEQLRKLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYS 62
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +RE
Sbjct: 63 SVSEVDAAMTARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIRE 122
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
YF +G IE+++++ + TG KRGF F+ F+D+D VDKIV K
Sbjct: 123 YFECYGKIETIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQK 165
Score = 148 (57.2 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 27/95 (28%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K +++K+F+GG+ T + ++ +FE +G+I + +M++ T + RGF F+
Sbjct: 91 REDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFECYGKIETIDIMEERSTGKKRGFCFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD ++ + H I+ E ++A+P+ E+
Sbjct: 151 TFDDHDTVDKIVAQKYHTINSHNCEVRKALPKQEM 185
>UNIPROTKB|F1RX74 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0050658 "RNA transport" evidence=IEA] [GO:0048025 "negative
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005730 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0071013 GO:GO:0050658
GO:GO:0043047 GeneTree:ENSGT00700000104376 OMA:HYSARTS
EMBL:CU469303 Ensembl:ENSSSCT00000017244 Uniprot:F1RX74
Length = 353
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 93/163 (57%), Positives = 127/163 (77%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
YF ++G ++++ ++T++++G KRGF F F+D+D VDKIVL K
Sbjct: 131 YFEEYGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKIVLQK 173
Score = 147 (56.8 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 25/90 (27%), Positives = 56/90 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G++ + ++ D + + RGFGF T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQEMQEVQSS 199
>RGD|1310403 [details] [associations]
symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein A2/B1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA;ISO]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IEA;ISO]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IEA;ISO] [GO:0050658 "RNA transport" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1310403 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 GO:GO:0071013 GO:GO:0050658
eggNOG:COG0724 GO:GO:0043047 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
CTD:3181 KO:K13158 EMBL:AB006815 EMBL:AB006816 EMBL:AB006817
EMBL:AB006818 IPI:IPI00212969 IPI:IPI00867934 IPI:IPI00923129
IPI:IPI00923135 RefSeq:NP_001098083.1 UniGene:Rn.231911
ProteinModelPortal:A7VJC2 SMR:A7VJC2 STRING:A7VJC2 PRIDE:A7VJC2
GeneID:362361 KEGG:rno:362361 UCSC:RGD:1310403 HOVERGEN:HBG108415
InParanoid:A7VJC2 NextBio:679650 ArrayExpress:A7VJC2
Genevestigator:A7VJC2 Uniprot:A7VJC2
Length = 353
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 93/163 (57%), Positives = 127/163 (77%)
Query: 7 DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYS 66
+ K E E RK+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70
Query: 67 EAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLRE 125
VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130
Query: 126 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI L K
Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQK 173
Score = 150 (57.9 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 26/90 (28%), Positives = 56/90 (62%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ H I+G E ++A+ R E+ + +++
Sbjct: 170 FLQKYHTINGHNAEVRKALSRQEMQEVQSS 199
>UNIPROTKB|E2RFV7 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 GeneTree:ENSGT00700000104376 CTD:220988 OMA:QGHDPKE
EMBL:AAEX03017802 RefSeq:XP_543761.2 ProteinModelPortal:E2RFV7
Ensembl:ENSCAFT00000021410 GeneID:608074 KEGG:cfa:608074
Uniprot:E2RFV7
Length = 378
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 94/158 (59%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 113 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 173 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 114 (45.2 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 90 KRAVPRDEIGK-PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAK 147
+R R E G P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T
Sbjct: 16 RRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRS 75
Query: 148 RGFAFIEFNDYDVVDKIVLSK 168
RGF F+ ++ + VD + ++
Sbjct: 76 RGFGFVTYSCVEEVDAAMCAR 96
>UNIPROTKB|P51991 [details] [associations]
symbol:HNRNPA3 "Heterogeneous nuclear ribonucleoprotein A3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0030529
"ribonucleoprotein complex" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471058
GO:GO:0000398 GO:GO:0071013 eggNOG:COG0724 HOVERGEN:HBG002295
EMBL:AC079305 HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF
HPA:HPA001666 EMBL:AY363225 EMBL:BC112027 EMBL:BC113470
IPI:IPI00419373 IPI:IPI00455134 PIR:I52962 RefSeq:NP_919223.1
UniGene:Hs.516539 ProteinModelPortal:P51991 SMR:P51991
IntAct:P51991 MINT:MINT-4999802 STRING:P51991 PhosphoSite:P51991
DMDM:51338779 PaxDb:P51991 PRIDE:P51991 Ensembl:ENST00000392524
Ensembl:ENST00000411529 Ensembl:ENST00000435711 GeneID:220988
KEGG:hsa:220988 UCSC:uc002ulb.1 CTD:220988 GeneCards:GC02P178077
HGNC:HGNC:24941 MIM:605372 neXtProt:NX_P51991 PharmGKB:PA162391169
InParanoid:P51991 OMA:QGHDPKE PhylomeDB:P51991 ChiTaRS:HNRNPA3
GenomeRNAi:220988 NextBio:91133 PMAP-CutDB:P51991
ArrayExpress:P51991 Bgee:P51991 CleanEx:HS_HNRNPA3
Genevestigator:P51991 GermOnline:ENSG00000170144 Uniprot:P51991
Length = 378
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 94/158 (59%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 113 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 173 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 114 (45.2 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 90 KRAVPRDEIGK-PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAK 147
+R R E G P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T
Sbjct: 16 RRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRS 75
Query: 148 RGFAFIEFNDYDVVDKIVLSK 168
RGF F+ ++ + VD + ++
Sbjct: 76 RGFGFVTYSCVEEVDAAMCAR 96
>UNIPROTKB|F2Z5B4 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013 KO:K12741
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:CU862048
RefSeq:XP_003133549.1 ProteinModelPortal:F2Z5B4 SMR:F2Z5B4
Ensembl:ENSSSCT00000017409 GeneID:100516520 KEGG:ssc:100516520
Uniprot:F2Z5B4
Length = 379
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 94/158 (59%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 113 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 173 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 114 (45.2 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 90 KRAVPRDEIGK-PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAK 147
+R R E G P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T
Sbjct: 16 RRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRS 75
Query: 148 RGFAFIEFNDYDVVDKIVLSK 168
RGF F+ ++ + VD + ++
Sbjct: 76 RGFGFVTYSCVEEVDAAMCAR 96
>RGD|2321074 [details] [associations]
symbol:LOC100360986 "mCG1035404-like" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:2321074 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 IPI:IPI00559028
PRIDE:D4ACQ0 Ensembl:ENSRNOT00000002122 UCSC:RGD:2321074
ArrayExpress:D4ACQ0 Uniprot:D4ACQ0
Length = 320
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 94/158 (59%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 154 (59.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 113 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 173 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 114 (45.2 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 90 KRAVPRDEIGK-PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAK 147
+R R E G P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T
Sbjct: 16 RRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRS 75
Query: 148 RGFAFIEFNDYDVVDKIVLSK 168
RGF F+ ++ + VD + ++
Sbjct: 76 RGFGFVTYSCVEEVDAAMCAR 96
>RGD|727807 [details] [associations]
symbol:Hnrnpa3 "heterogeneous nuclear ribonucleoprotein A3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IMP] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0035770
"ribonucleoprotein granule" evidence=IDA] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IMP] [GO:0051033 "RNA transmembrane transporter activity"
evidence=IMP] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:727807 GO:GO:0005634
GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043005 GO:GO:0005681
GO:GO:0051028 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF CTD:220988
EMBL:AY363226 EMBL:AY363227 EMBL:BC081878 IPI:IPI00382376
IPI:IPI00464458 RefSeq:NP_001104764.1 RefSeq:NP_001104765.1
RefSeq:NP_937765.1 UniGene:Rn.107690 UniGene:Rn.99947
ProteinModelPortal:Q6URK4 SMR:Q6URK4 STRING:Q6URK4
PhosphoSite:Q6URK4 PRIDE:Q6URK4 GeneID:362152 KEGG:rno:362152
UCSC:RGD:727807 InParanoid:Q6URK4 NextBio:678824
ArrayExpress:Q6URK4 Genevestigator:Q6URK4 GO:GO:0035770
GO:GO:0051033 Uniprot:Q6URK4
Length = 379
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 94/158 (59%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 113 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 173 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 114 (45.2 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 90 KRAVPRDEIGK-PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAK 147
+R R E G P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T
Sbjct: 16 RRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRS 75
Query: 148 RGFAFIEFNDYDVVDKIVLSK 168
RGF F+ ++ + VD + ++
Sbjct: 76 RGFGFVTYSCVEEVDAAMCAR 96
>UNIPROTKB|E1BEG2 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:DAAA02004160
IPI:IPI00690667 Ensembl:ENSBTAT00000028757 Uniprot:E1BEG2
Length = 380
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 94/158 (59%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 113 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 173 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 207
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESV 136
RP GR + A D P+ ++K+F+GGL + DD LRE+F ++GT+
Sbjct: 9 RPQPDSGRRRRRRGAQGHD----PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDC 64
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
++ + +T RGF F+ ++ + VD + ++
Sbjct: 65 VVMRDPQTKRSRGFGFVTYSCVEEVDAAMCAR 96
>UNIPROTKB|E7EWI9 [details] [associations]
symbol:HNRNPA3 "Heterogeneous nuclear ribonucleoprotein A3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC079305 HGNC:HGNC:24941
ChiTaRS:HNRNPA3 IPI:IPI00939124 ProteinModelPortal:E7EWI9
SMR:E7EWI9 Ensembl:ENST00000416446 ArrayExpress:E7EWI9 Bgee:E7EWI9
Uniprot:E7EWI9
Length = 322
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 94/158 (59%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 154 (59.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 91 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 151 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 185
Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSK 168
VD + ++
Sbjct: 66 EVDAAMCAR 74
>UNIPROTKB|F1LNG4 [details] [associations]
symbol:Hnrnpa3 "Heterogeneous nuclear ribonucleoprotein A3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00567786 Ensembl:ENSRNOT00000050735 ArrayExpress:F1LNG4
Uniprot:F1LNG4
Length = 357
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 94/158 (59%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 154 (59.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 91 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 150
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 151 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 185
Score = 111 (44.1 bits), Expect = 0.00021, P = 0.00021
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 160 VVDKIVLSK 168
VD + ++
Sbjct: 66 EVDAAMCAR 74
>UNIPROTKB|D4A491 [details] [associations]
symbol:D4A491 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
IPI:IPI00560785 ProteinModelPortal:D4A491
Ensembl:ENSRNOT00000046349 OMA:DNAMEAR Uniprot:D4A491
Length = 239
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 94/158 (59%), Positives = 123/158 (77%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE +RK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 2 EPEQVRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH ++GRVVE KRAV R++ +P+A TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 62 DAAMNARPHKVNGRVVEPKRAVSREDSQRPDAYLTVKKIFVGGIKEDTEEHHLRDYFGQY 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G E + +VT++ +G KRGFAF+ F+D D VDKIV+ K
Sbjct: 122 GKTEVIEIVTDRGSGKKRGFAFVTFDDRDSVDKIVIQK 159
Score = 129 (50.5 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 23/86 (26%), Positives = 51/86 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +F Q+G+ + ++ D + + RGF F+T+ + VD
Sbjct: 96 TVKKIFVGGIKEDTEEHHLRDYFGQYGKTEVIEIVTDRGSGKKRGFAFVTFDDRDSVDKI 155
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGK 100
+ + H ++G E ++A P ++ G+
Sbjct: 156 VIQKYHTVNGHNCEVRKA-PSNQRGR 180
>UNIPROTKB|D4A1X0 [details] [associations]
symbol:D4A1X0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0097157
GO:GO:0048025 OrthoDB:EOG4HQDKF IPI:IPI00778370
ProteinModelPortal:D4A1X0 Ensembl:ENSRNOT00000061082 Uniprot:D4A1X0
Length = 312
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 92/158 (58%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+FIGGL + TT+ESL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFCKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVKK+FVGG+K D EE LR+YF ++
Sbjct: 64 DVAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSG-KRGFGFVTFDDHDPVDKIVLQK 160
Score = 134 (52.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 25/84 (29%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGK-RGFGFVTFDDHDPVDKI 156
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H +G E ++A+ R E+
Sbjct: 157 VLQKYHTKNGHNAEVRKALSRQEM 180
>UNIPROTKB|F1M2S4 [details] [associations]
symbol:F1M2S4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00951465
ProteinModelPortal:F1M2S4 Ensembl:ENSRNOT00000050715 Uniprot:F1M2S4
Length = 208
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 93/157 (59%), Positives = 123/157 (78%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FIGGL ++TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 2 EPEQLLKLFIGGLSFKTTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVG +D EE LR+YF Q+G
Sbjct: 62 DAAMNARPHKVDGRVVEPKRAVSREDSRRPGAHLTVKKIFVG--EDTEEHHLRDYFEQYG 119
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 120 KIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 156
Score = 129 (50.5 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 25/90 (27%), Positives = 53/90 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+G D T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 96 TVKKIFVGE-D--TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 152
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 153 VIQKYHTVNGHNCEVRKALSKQEMASASSS 182
>UNIPROTKB|D4A6A2 [details] [associations]
symbol:D4A6A2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00949070
ProteinModelPortal:D4A6A2 Ensembl:ENSRNOT00000035567 Uniprot:D4A6A2
Length = 232
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ F++WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFQKWGTLTDCVVMRDPQTKRSRGFGFVTYS-CEEV 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D E +LR+YF ++
Sbjct: 67 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTGEYNLRDYFEKY 126
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 127 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 164
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 90 REDSVKPGAHLTVKKIFVGGIKEDTGEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 149
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 150 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 184
Score = 105 (42.0 bits), Expect = 0.00051, P = 0.00051
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFQKWGTLTDCVVMRDPQTKRSRGFGFVTYSCEE 65
Query: 160 V 160
V
Sbjct: 66 V 66
>UNIPROTKB|D4AD23 [details] [associations]
symbol:D4AD23 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
InterPro:IPR021662 Pfam:PF11627 IPI:IPI00390944
ProteinModelPortal:D4AD23 Ensembl:ENSRNOT00000039846 Uniprot:D4AD23
Length = 313
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 90/157 (57%), Positives = 120/157 (76%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIG L + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGALSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RP ++GRVVE KRAV R++ +P A+ TVKK+FVGG+K+ E LR+YF Q+G
Sbjct: 69 DAAMNARPQKVNGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEHHLRDYFEQYG 128
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
E + ++T++ G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 KTEVIEIMTDRGRGKKRGFAFVTFDDHDSVDKIVIQK 165
Score = 126 (49.4 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T+ L+ +FEQ+G+ + +M D + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIK-EDTEHHLRDYFEQYGKTEVIEIMTDRGRGKKRGFAFVTFDDHDSVDKI 161
Query: 75 MSNRPHNIDGRVVETK 90
+ + H ++G ET+
Sbjct: 162 VIQKYHTVNGHNCETR 177
>UNIPROTKB|F1M460 [details] [associations]
symbol:F1M460 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00569538
ProteinModelPortal:F1M460 Ensembl:ENSRNOT00000043465
ArrayExpress:F1M460 Uniprot:F1M460
Length = 224
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 92/162 (56%), Positives = 124/162 (76%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+ IGGL + TTD+SL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 3 EPEQLRKLLIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 62
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A+ RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 63 DAAVCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 122
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL 172
G IE++ ++ + ++G KRGFAF+ F+D+D VDKIV K ++
Sbjct: 123 GKIETIEVMEDSQSGKKRGFAFVTFDDHDTVDKIVDQKYHII 164
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 86 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDSQSGKKRGFAFV 145
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 146 TFDDHDTVDKIVDQKYHIINGHNCEVKKALSKQEM 180
>UNIPROTKB|G5E5V7 [details] [associations]
symbol:G5E5V7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051170 "nuclear import" evidence=IEA] [GO:0051168 "nuclear
export" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
EMBL:DAAA02007960 Ensembl:ENSBTAT00000036150 OMA:ANTMPIL
Uniprot:G5E5V7
Length = 319
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 94/158 (59%), Positives = 122/158 (77%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E LRK+FIGGL + TTDESL++ FEQWG + D VVM DP TKRSRGFGF+TY+ + V
Sbjct: 18 ELEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVM-DPNTKRSRGFGFVTYTTVEEV 76
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RP +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 77 DAAMNARPQKMDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 136
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 137 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 174
Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 25/90 (27%), Positives = 53/90 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 111 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 170
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H +G E ++A+ + E+ ++
Sbjct: 171 VIQKYHTGNGHNCEVRKALSKQEMASASSS 200
>UNIPROTKB|F1N4K3 [details] [associations]
symbol:F1N4K3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:DAAA02019527
IPI:IPI00906169 Ensembl:ENSBTAT00000002951 OMA:HAINGHH
Uniprot:F1N4K3
Length = 329
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 85/158 (53%), Positives = 125/158 (79%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E +RK+FIGGL ++TT+ESL+ +++QWGE+ D VV++D ++RSRG GF+T+S V
Sbjct: 4 EAEQIRKLFIGGLSFQTTEESLRKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSVTEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRV+E +RA+PR+ G+ A+ T+KK+FVGG+K D EE LREYF ++
Sbjct: 64 DAAMAARPHSIDGRVLEPRRAIPREASGQRGAHWTLKKLFVGGIKEDTEEHHLREYFEKY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+++ ++T++++G KRGF F+ F+DYD VDKIVL K
Sbjct: 124 GKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKIVLQK 161
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 28/95 (29%), Positives = 58/95 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+L+K+F+GG+ T + L+ +FE++G+I + ++ D + R RGFGF+T+ + VD
Sbjct: 98 TLKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKI 157
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKK 109
+ + H I+G E ++A+ E+ + + + + K+
Sbjct: 158 VLQKYHAINGHHAEVRKALSIWEMQQVQGSRSRKR 192
>UNIPROTKB|F1M6U1 [details] [associations]
symbol:F1M6U1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00362299 Ensembl:ENSRNOT00000007800
Uniprot:F1M6U1
Length = 252
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 89/156 (57%), Positives = 118/156 (75%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E L K+FI GL + TTDESL++ FE+WG + D VVM+DP TKR RGFGF+TY+ + VD
Sbjct: 4 EQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDA 63
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGT 132
AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVG +K D EE LREYF Q+G
Sbjct: 64 AMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGK 123
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE + ++T++ +G KRGF F+ F+D+D VDKIV+ K
Sbjct: 124 IEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQK 159
Score = 139 (54.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 24/90 (26%), Positives = 53/90 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+G + T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 96 TVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKI 155
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 156 VIQKYHTVNGHNCEVRKALSKQEMASASSS 185
>UNIPROTKB|E9PSU5 [details] [associations]
symbol:E9PSU5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 IPI:IPI00364363 PRIDE:E9PSU5
Ensembl:ENSRNOT00000022054 Uniprot:E9PSU5
Length = 363
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 93/165 (56%), Positives = 124/165 (75%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFE-------QWGEIVDVVVMKDPITKRSRGFGFIT 64
EPE LRK+FIGGL + TTD+SL+ FE +WG + D VVM+DP TKRSRGFGF+T
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEGWRDGSEKWGTLTDCVVMRDPQTKRSRGFGFVT 67
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDL 123
YS + VD AM RPH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D E +L
Sbjct: 68 YS-CEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTGEYNL 126
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
R+YF ++G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 127 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 171
Score = 153 (58.9 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 30/95 (31%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 97 REDSVKPGAHLTVKKIFVGGIKEDTGEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 156
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 157 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 191
>UNIPROTKB|F1SA35 [details] [associations]
symbol:LOC100737421 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:FP326688 RefSeq:XP_003480852.1
Ensembl:ENSSSCT00000014862 GeneID:100737421 KEGG:ssc:100737421
OMA:STFGNIV Uniprot:F1SA35
Length = 349
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 84/156 (53%), Positives = 121/156 (77%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+FIGGL RTT++SL+ +++QWG++ D VV++DP KRSRGFGF+T+S VD
Sbjct: 18 EQFHKLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSVAEVDA 77
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGT 132
AM+ RPH++DG+VV+ KRAV R+E KP A+ VKK+FVGG+K D EE LR+YF ++G
Sbjct: 78 AMAARPHSVDGKVVDPKRAVAREESEKPGAHLAVKKLFVGGIKEDTEEHHLRDYFEKYGK 137
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
I+++ ++T++++G KRGF F+ F+D+D VDKIVL K
Sbjct: 138 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 149 (57.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 27/99 (27%), Positives = 60/99 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 AVKKLFVGGIKEDTEEHHLRDYFEKYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVG 113
+ + H I+G E +A+ R E+ + +++ + + +G
Sbjct: 170 VLQKYHTINGHHAEVGKALSRQEMQEVQSSTSGRGGHIG 208
>UNIPROTKB|F1PGQ0 [details] [associations]
symbol:F1PGQ0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03010176
Ensembl:ENSCAFT00000005615 OMA:RRYQRIT Uniprot:F1PGQ0
Length = 318
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 91/158 (57%), Positives = 121/158 (76%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FIGGL + TT+ESL++ FEQWG D VVM+DP TKRSRG GF+ Y+ + V
Sbjct: 9 EPEQLWKLFIGGLSFETTEESLRSHFEQWGTFTDCVVMRDPNTKRSRGVGFLMYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAAMNARPH-VDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G K+GFAF+ F+D+D VDKIV+ K
Sbjct: 128 GKIEVIEIMTDRGSG-KKGFAFVTFDDHDSVDKIVIQK 164
Score = 136 (52.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 27/100 (27%), Positives = 59/100 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + +GF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGK-KGFAFVTFDDHDSVDKI 160
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGG 114
+ + H ++G E ++A+ + E+ A++T + + G
Sbjct: 161 VIQKYHPVNGHSCEVRKALSKQEMAS--ASSTQRDLSGSG 198
>UNIPROTKB|F1M5N1 [details] [associations]
symbol:F1M5N1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00567689
ProteinModelPortal:F1M5N1 Ensembl:ENSRNOT00000023344 Uniprot:F1M5N1
Length = 207
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 90/158 (56%), Positives = 118/158 (74%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE +RK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 5 EPEQVRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 64
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE KRAV ++ +P A +K +FVG +K D EE LR+YF Q+
Sbjct: 65 DAAMNARPHKVDGRVVEPKRAVSIEDSQRPGAYLNMK-IFVGAIKEDTEEHHLRDYFGQY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G E + +VT++ +G KRGFAF+ F+D D VDKIV+ K
Sbjct: 124 GKTEVIEIVTDRGSGKKRGFAFVTFDDRDSVDKIVIQK 161
Score = 120 (47.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 21/87 (24%), Positives = 47/87 (54%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+G + T + L+ +F Q+G+ + ++ D + + RGF F+T+ + VD +
Sbjct: 101 KIFVGAIKEDTEEHHLRDYFGQYGKTEVIEIVTDRGSGKKRGFAFVTFDDRDSVDKIVIQ 160
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ H ++G E ++A + E+ ++
Sbjct: 161 KYHTVNGHNCEVRKAPSKQEMASASSS 187
>UNIPROTKB|F1PVY3 [details] [associations]
symbol:F1PVY3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03016228
Ensembl:ENSCAFT00000027434 Uniprot:F1PVY3
Length = 301
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 87/154 (56%), Positives = 119/154 (77%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L+K+FIGGL + TTDESL++ FE WG + VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLQKLFIGGLSFETTDESLRSHFE-WGTLTGCVVMRDPNTKRSRGFGFVTYATVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RPH +DGRVVE KRAV R++ +A+ TVKK+FVGG+K+ ED LR+YF ++G
Sbjct: 68 DAAMNARPHKVDGRVVEPKRAVSREDSQTLDAHLTVKKIFVGGIKENTEDHLRDYF-EYG 126
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
IE + ++T++ +G KRGF F+ F+D+D VDKI+
Sbjct: 127 KIEVIEIMTDRGSGKKRGFTFVTFDDHDSVDKII 160
Score = 128 (50.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 30/112 (26%), Positives = 63/112 (56%)
Query: 6 DDSKCTEPE-SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
+DS+ + +++K+F+GG+ T D L+ +FE +G+I + +M D + + RGF F+T
Sbjct: 92 EDSQTLDAHLTVKKIFVGGIKENTEDH-LRDYFE-YGKIEVIEIMTDRGSGKKRGFTFVT 149
Query: 65 YSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM--FVGG 114
+ + VD + + H ++G E ++A+ + E+ ++ ++ F GG
Sbjct: 150 FDDHDSVDKIIQ-KYHTVNGHNCEVRKALSKQEMASASSSQSLSGSGNFGGG 200
>UNIPROTKB|E2R5N6 [details] [associations]
symbol:E2R5N6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03012109
Ensembl:ENSCAFT00000010232 OMA:EMASASC Uniprot:E2R5N6
Length = 322
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 87/157 (55%), Positives = 118/157 (75%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
PE L+K+FIGG + TTDESL++ F+Q G + D VVM+DP TKRSRGFGF+TY+ + VD
Sbjct: 10 PEQLQKLFIGGWSFETTDESLRSHFKQRGILTDCVVMRDPNTKRSRGFGFVTYTAVEEVD 69
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
AM RPH +DGRVVE KR +++ +P A+ TVKK+F GG+K D EE LR+YF Q+G
Sbjct: 70 PAMHARPHKVDGRVVEPKRTSSKEDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYFEQYG 129
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 130 KIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 141 (54.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 25/84 (29%), Positives = 51/84 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFAGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E ++A+ + E+
Sbjct: 163 VIQKYHTVNGHNWEVRKALSKQEM 186
>UNIPROTKB|D4A2D2 [details] [associations]
symbol:D4A2D2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
IPI:IPI00559583 ProteinModelPortal:D4A2D2
Ensembl:ENSRNOT00000032337 Uniprot:D4A2D2
Length = 262
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 89/158 (56%), Positives = 120/158 (75%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + + VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLTFETTDESLRSHFEQWGTLTECVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVVE +RAV R++ +++ K+FVGG+K D EE LR+Y Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPERAVSRED-----SHSLTVKIFVGGIKEDTEEHYLRDYSEQY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAF+ F+DYD VDKIV+ K
Sbjct: 124 GKIEVIEIMTDRGSGKKRGFAFVTFDDYDSVDKIVIRK 161
Score = 115 (45.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 29/113 (25%), Positives = 57/113 (50%)
Query: 2 KPRYDDSKCTEPE---------SLR-KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKD 51
+P D + EPE SL K+F+GG+ T + L+ + EQ+G+I + +M D
Sbjct: 75 RPHKVDGRVVEPERAVSREDSHSLTVKIFVGGIKEDTEEHYLRDYSEQYGKIEVIEIMTD 134
Query: 52 PITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + RGF F+T+ + VD + + H ++ ++A+ + E+ ++
Sbjct: 135 RGSGKKRGFAFVTFDDYDSVDKIVIRKYHTVNDHNC-VRKALSKQEMASASSS 186
>UNIPROTKB|F1N3T3 [details] [associations]
symbol:F1N3T3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:DAAA02019525 IPI:IPI00709098
Ensembl:ENSBTAT00000014774 OMA:FGGYPCY Uniprot:F1N3T3
Length = 352
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 85/168 (50%), Positives = 123/168 (73%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E +RK+FIGGL TT+ESL+ +++QWGE+ D VV++ +++SRGFGF+T+S V
Sbjct: 16 ENEQIRKLFIGGLSSETTEESLKNYYQQWGELTDCVVIRGLASQKSRGFGFVTFSSVAEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH+IDGRVV+ KRAV R++ K + VKK+FVGG+K D EE LREYF ++
Sbjct: 76 DAAMAARPHSIDGRVVDPKRAVSREKSEKQGSLVNVKKLFVGGIKEDTEEHHLREYFEKY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I+++ ++T++++G KRGF F+ F+DYD VDKI+L K + R E
Sbjct: 136 GKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKIMLQKYHAINGHRAE 183
Score = 147 (56.8 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 27/84 (32%), Positives = 52/84 (61%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 110 NVKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKI 169
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
M + H I+G E +A+ R E+
Sbjct: 170 MLQKYHAINGHRAEVGKALSRQEM 193
>UNIPROTKB|F1Q2T4 [details] [associations]
symbol:F1Q2T4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03026834
Ensembl:ENSCAFT00000030325 Uniprot:F1Q2T4
Length = 290
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 90/158 (56%), Positives = 119/158 (75%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TT+ESL++ FEQWG + D VVM+DP TK SRGFGF+TY+ K V
Sbjct: 9 EPEQLRKLFIGGLSFETTNESLRSHFEQWGMLRDCVVMRDPNTKHSRGFGFVTYATVKEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A R H +DGRVVE KRAV R++ +P A+ TV+K+FVGG+K D EE LR+YF Q+
Sbjct: 69 DAA---RSHKVDGRVVEPKRAVSREDSQRPGAHLTVRKIFVGGIKEDTEEHHLRDYFKQY 125
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFA + F+D+D DKIV+ K
Sbjct: 126 GKIEVIEIMTDRGSGKKRGFASVTFDDHDK-DKIVIQK 162
>ZFIN|ZDB-GENE-030131-6154 [details] [associations]
symbol:hnrnpa0b "heterogeneous nuclear
ribonucleoprotein A0b" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-6154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12894
EMBL:BC066434 IPI:IPI00507638 RefSeq:NP_999871.1 UniGene:Dr.35374
ProteinModelPortal:Q6NYW8 SMR:Q6NYW8 STRING:Q6NYW8 PRIDE:Q6NYW8
GeneID:334222 KEGG:dre:334222 CTD:334222 InParanoid:Q6NYW8
OrthoDB:EOG4M65KN NextBio:20810313 ArrayExpress:Q6NYW8 Bgee:Q6NYW8
Uniprot:Q6NYW8
Length = 314
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 87/169 (51%), Positives = 123/169 (72%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
+E E L K+F+GGL+ +TT++ L+++FEQ+G + D VV+++ +RSR FGF+TYS ++
Sbjct: 2 SEMEKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEE 61
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 129
D AM+ RPH +DG+ VE KRAV R++ G+PEA A VKK+FVGGLKD EE DL E+FSQ
Sbjct: 62 ADAAMAARPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFFSQ 121
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
FG IE ++T+K+TG KRGF F+ F D D DK V+ K ++ +VE
Sbjct: 122 FGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVE 170
Score = 146 (56.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 13 PESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
PE+L +K+F+GGL ++ L FF Q+G I V+ D T + RGFGF+ + +
Sbjct: 92 PEALAKVKKIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDND 151
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H I+G VE K+A+ + EI
Sbjct: 152 SADKAVVLKFHMINGHKVEVKKALTKQEI 180
>ZFIN|ZDB-GENE-030131-618 [details] [associations]
symbol:hnrnpa0l "heterogeneous nuclear
ribonucleoprotein A0, like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-618
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 EMBL:BX088707
EMBL:BC050513 IPI:IPI00489762 UniGene:Dr.75590 UniGene:Dr.79301
SMR:Q7ZU48 STRING:Q7ZU48 Ensembl:ENSDART00000052511
InParanoid:Q7ZU48 OMA:ICRRIAP Uniprot:Q7ZU48
Length = 302
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 90/165 (54%), Positives = 119/165 (72%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVD-VVVMKDPITKRSRGFGFITYSEAKMVDDA 74
L K+F+GGL+ +TTDE L+A FEQ+G++ D VVVM P+ +RSR FGF+TYS + D A
Sbjct: 5 LCKLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPL-QRSRCFGFVTYSSTEEADAA 63
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTI 133
MS RPH +DG V+ KRAV R++ GKPE A VKK+FVGGLKD ED+ L++YFSQFG I
Sbjct: 64 MSARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPI 123
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E ++T+K+TG KRGF F+ F+D D DK V+ K + +VE
Sbjct: 124 EKAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVE 168
Score = 154 (59.3 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE L +K+F+GGL DE LQ +F Q+G I V+ D T + RGFGF+ + +
Sbjct: 89 KPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDN 148
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H+I G VE K+A+ + E+
Sbjct: 149 DSADKAVVMKFHSICGHKVEVKKALTKQEM 178
>WB|WBGene00001999 [details] [associations]
symbol:hrp-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048477 GO:GO:0003723 GO:GO:0040035 GO:GO:0030529
GO:GO:0040015 GO:GO:0000398 GO:GO:0000781 eggNOG:COG0724
GO:GO:0031581 GeneTree:ENSGT00700000104255 KO:K12741 EMBL:D10877
EMBL:FO081370 PIR:S35500 RefSeq:NP_001023199.1
RefSeq:NP_001040944.1 RefSeq:NP_001040945.1 RefSeq:NP_500326.2
UniGene:Cel.7537 ProteinModelPortal:Q22037 SMR:Q22037 IntAct:Q22037
STRING:Q22037 PaxDb:Q22037 PRIDE:Q22037 EnsemblMetazoa:F42A6.7a.1
EnsemblMetazoa:F42A6.7a.2 GeneID:177101 KEGG:cel:CELE_F42A6.7
UCSC:F42A6.7a.1 CTD:177101 WormBase:F42A6.7a WormBase:F42A6.7b
WormBase:F42A6.7c WormBase:F42A6.7d InParanoid:Q22037 OMA:YGGGWGQ
NextBio:895332 Uniprot:Q22037
Length = 346
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 81/168 (48%), Positives = 119/168 (70%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE+LRK+F+GGL TTD+ ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T+S V
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH IDG+ V+ KRAVPRD+ + E+N + K+++V G++ D ED L EYF+++
Sbjct: 78 DAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKY 137
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+ ++ +K T RGF F+ F+D+D VD+ VL K ++ R +
Sbjct: 138 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Score = 152 (58.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 25/102 (24%), Positives = 57/102 (55%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D ++ S +++++ G+ T++ L +F ++G + ++ D T++ RGFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+T+ + VD + + H ++G + ++ + +DE+ K + N
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMN 201
>ZFIN|ZDB-GENE-030131-2249 [details] [associations]
symbol:hnrnpa0a "heterogeneous nuclear
ribonucleoprotein A0a" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-2249
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4W6NX4
EMBL:BC066672 IPI:IPI00995382 RefSeq:NP_997810.1 UniGene:Dr.75559
ProteinModelPortal:Q6NYB0 SMR:Q6NYB0 STRING:Q6NYB0 PRIDE:Q6NYB0
GeneID:323529 KEGG:dre:323529 CTD:323529 InParanoid:Q6NYB0
NextBio:20808302 ArrayExpress:Q6NYB0 Bgee:Q6NYB0 Uniprot:Q6NYB0
Length = 305
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 88/164 (53%), Positives = 116/164 (70%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+F+GGL+ +TTD+ L+ FEQ+G++ D VV+++ KRSR FGF+TYS D AM
Sbjct: 9 LCKLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEADSAM 68
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIE 134
S RPH +DG VE KRAV R++ GKPEA A VKK+F+GGLKD EED LR+ FSQFG +E
Sbjct: 69 SARPHILDGNNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEEDHLRDCFSQFGAVE 128
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++T+KETG KRGF F+ F D D DK V+ K ++ +VE
Sbjct: 129 KAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHMINGHKVE 172
Score = 140 (54.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 12 EPESL---RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
+PE+L +K+FIGGL ++ L+ F Q+G + V+ D T + RGFGF+ + +
Sbjct: 93 KPEALAKVKKIFIGGLKDDIEEDHLRDCFSQFGAVEKAEVITDKETGKKRGFGFVYFEDN 152
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
D A+ + H I+G VE K+A+ + E+
Sbjct: 153 DSADKAVVLKFHMINGHKVEVKKALTKQEM 182
>UNIPROTKB|D4A8U2 [details] [associations]
symbol:D4A8U2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00947740
ProteinModelPortal:D4A8U2 Ensembl:ENSRNOT00000064543
ArrayExpress:D4A8U2 Uniprot:D4A8U2
Length = 196
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 86/155 (55%), Positives = 117/155 (75%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TD+SL+ FE+WG + D VVM+DP TKRSR F F+TYS K V
Sbjct: 8 EPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM +PHN+DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++
Sbjct: 68 DAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G I+++ ++ ++ +G +R F+ F+D+D VDKIV
Sbjct: 128 GKIKTMEVMEDRLSGKER-LLFVTFDDHDTVDKIV 161
Score = 102 (41.0 bits), Expect = 0.00076, P = 0.00076
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T R F+F+ ++
Sbjct: 6 PKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVK 65
Query: 160 VVD 162
VD
Sbjct: 66 EVD 68
>UNIPROTKB|F1M6S2 [details] [associations]
symbol:F1M6S2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00782238
ProteinModelPortal:F1M6S2 Ensembl:ENSRNOT00000030712 Uniprot:F1M6S2
Length = 223
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 89/156 (57%), Positives = 117/156 (75%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI-TYSEAKM 70
EPE LRK+FIG L + TTD+SL+ FE+WG + D VVM+D KRSR FGF+ TYS K
Sbjct: 13 EPEQLRKLFIGCLSFETTDDSLREHFEKWGTL-DCVVMRDLQIKRSRSFGFVSTYSCVKE 71
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VD AM RPH +DG VVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF +
Sbjct: 72 VDAAMCARPHKVDGHVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 131
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+G IE + ++ ++++G KRGFAF+ F+D+D VDKIV
Sbjct: 132 YGKIEIIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 167
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 31/95 (32%), Positives = 57/95 (60%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 96 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIEIIEVMEDRQSGKKRGFAFV 155
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+AV + E+
Sbjct: 156 TFDDHDTVDKIVQ-KYHTINGHNYEVKKAVSKQEM 189
>UNIPROTKB|F1SCL3 [details] [associations]
symbol:LOC100522980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:CU986279
RefSeq:XP_003123190.1 Ensembl:ENSSSCT00000014811 GeneID:100522980
KEGG:ssc:100522980 Uniprot:F1SCL3
Length = 354
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 84/161 (52%), Positives = 118/161 (73%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K E E RK+FIGGL T +ESL+ +++QWG++ D VV++DP ++RSRGFGF+ +S
Sbjct: 13 KKRESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSV 72
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AM+ RPH+IDGRVV +KR VPR+E GKP A T KK+FVGG+K D E LR+YF
Sbjct: 73 AEVDAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYF 132
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
++GTI+++ ++ +++G K F F+ F+D+D VDKIVL K
Sbjct: 133 ERYGTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKIVLQK 171
Score = 130 (50.8 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 28/111 (25%), Positives = 60/111 (54%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + K + +K+F+GG+ TT+ L+ +FE++G I + +++ + R FGF
Sbjct: 98 PREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIRQ--SGRKTAFGF 155
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVG 113
+T+ + VD + + H I+G + ++A+ R + + +++ + VG
Sbjct: 156 VTFDDHDPVDKIVLQKYHTINGHHAQLEKALSRQGMQEVQSSRRGRGRHVG 206
>UNIPROTKB|F1SCM6 [details] [associations]
symbol:LOC100522063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:CU986279
RefSeq:XP_003123185.1 Ensembl:ENSSSCT00000014807 GeneID:100522063
KEGG:ssc:100522063 Uniprot:F1SCM6
Length = 354
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 84/161 (52%), Positives = 118/161 (73%)
Query: 9 KCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEA 68
K E E RK+FIGGL T +ESL+ +++QWG++ D VV++DP ++RSRGFGF+ +S
Sbjct: 13 KKRESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSV 72
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
VD AM+ RPH+IDGRVV +KR VPR+E GKP A T KK+FVGG+K D E LR+YF
Sbjct: 73 AEVDAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYF 132
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
++GTI+++ ++ +++G K F F+ F+D+D VDKIVL K
Sbjct: 133 ERYGTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKIVLQK 171
Score = 130 (50.8 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 28/111 (25%), Positives = 60/111 (54%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR + K + +K+F+GG+ TT+ L+ +FE++G I + +++ + R FGF
Sbjct: 98 PREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIRQ--SGRKTAFGF 155
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVG 113
+T+ + VD + + H I+G + ++A+ R + + +++ + VG
Sbjct: 156 VTFDDHDPVDKIVLQKYHTINGHHAQLEKALSRQGMQEVQSSRRRRGRHVG 206
>UNIPROTKB|F1M6C7 [details] [associations]
symbol:F1M6C7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 IPI:IPI00370270
Ensembl:ENSRNOT00000014756 Uniprot:F1M6C7
Length = 273
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 85/157 (54%), Positives = 117/157 (74%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
PE LRK+FIGGL ++TT+ESL++ FEQW + D V M+DP TKRSRGFGF+TY+ + VD
Sbjct: 1 PEQLRKLFIGGLSFKTTNESLRSHFEQWRTLTDCVEMRDPNTKRSRGFGFVTYTTVEEVD 60
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
AM+ RPH +DG VE KRAV R++ P A+ TVK++ VGG+K D EE LR+YF +G
Sbjct: 61 AAMNARPHKVDGSFVEPKRAVSREDSQSPGAHLTVKEISVGGIKEDTEEHHLRDYFEHYG 120
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE + ++T++ +G K+ FAF+ F+D+D VDKIV+ K
Sbjct: 121 KIEVIEIMTDRGSG-KKEFAFVTFDDHDSVDKIVIQK 156
>UNIPROTKB|E2RJI3 [details] [associations]
symbol:LOC608729 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03015120 RefSeq:XP_864182.2
ProteinModelPortal:E2RJI3 Ensembl:ENSCAFT00000015269 GeneID:608729
KEGG:cfa:608729 Uniprot:E2RJI3
Length = 321
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 88/159 (55%), Positives = 118/159 (74%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FI GL +TTDESL++ EQ G ++D VVM+DP TK SRGFGF TY+ + V
Sbjct: 9 EPEQLWKLFIKGLSSKTTDESLRSHCEQQGALMDCVVMRDPNTKHSRGFGFTTYATREDV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF-SQ 129
D M+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE L++YF Q
Sbjct: 69 DAVMNARPHKMDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLKDYFFEQ 128
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 YEKIEVIEIMTDRGSGKKRGFAFVTFDDHDFVDKIVIQK 167
Score = 131 (51.2 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 25/91 (27%), Positives = 53/91 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQA-FFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+++K+F+GG+ T + L+ FFEQ+ +I + +M D + + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEEHHLKDYFFEQYEKIEVIEIMTDRGSGKKRGFAFVTFDDHDFVDK 162
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 163 IVIQKCHPVNGHDHEVRKALSKQEMASASSS 193
>UNIPROTKB|F1LUM4 [details] [associations]
symbol:F1LUM4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00389838
ProteinModelPortal:F1LUM4 Ensembl:ENSRNOT00000031839 Uniprot:F1LUM4
Length = 209
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 82/151 (54%), Positives = 113/151 (74%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+ IGGL + TTD+SL+ E+WG + D VVM DP T+ SRGFGF+TYS + VD AM
Sbjct: 1 LLIGGLSFETTDDSLREHSEKWGTLTDCVVMTDPQTEHSRGFGFVTYSCVEEVDAAMCAW 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
PH +DGRVVE KRAV R++ KP A+ TVKK+FVGG+K D EE +LR+YF ++G IE++
Sbjct: 61 PHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIE 120
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
++ ++++G KRGFAF+ F+D+D VDKIV +
Sbjct: 121 VMEDRQSGKKRGFAFVTFDDHDTVDKIVFQE 151
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 30/95 (31%), Positives = 55/95 (57%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 77 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 136
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + H I+ E K+AV + E+
Sbjct: 137 TFDDHDTVDKIVFQEHHAINRHNCEVKKAVSKQEM 171
>UNIPROTKB|E2RF95 [details] [associations]
symbol:E2RF95 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03008728
Ensembl:ENSCAFT00000001067 OMA:CTTATVE Uniprot:E2RF95
Length = 308
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 89/160 (55%), Positives = 116/160 (72%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM- 70
+PE LRK+FIGGL T+ESL++ EQWG + D VV +DP TK SRGFGFIT + A +
Sbjct: 9 DPEQLRKLFIGGLSLEITNESLRSHSEQWGMLTDRVVRRDPNTKGSRGFGFITCTTATVE 68
Query: 71 -VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 128
VD AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK FVGG+K D EE LR+YF
Sbjct: 69 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKTFVGGIKEDTEEHHLRDYFE 128
Query: 129 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
Q+G IE + ++ + +G KR FAF+ F+D+D VDKIV+ K
Sbjct: 129 QYGKIEVIEIMIDPGSG-KRSFAFVTFDDHDSVDKIVIQK 167
Score = 138 (53.6 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 26/83 (31%), Positives = 50/83 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K F+GG+ T + L+ +FEQ+G+I + +M DP + + R F F+T+ + VD
Sbjct: 105 TVKKTFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMIDPGSGK-RSFAFVTFDDHDSVDKI 163
Query: 75 MSNRPHNIDGRVVETKRAVPRDE 97
+ + H ++G E K+A+ + E
Sbjct: 164 VIQKYHTVNGHNCEVKKALSKQE 186
>UNIPROTKB|F1M117 [details] [associations]
symbol:F1M117 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC128353
EMBL:AC111733 IPI:IPI00558412 Ensembl:ENSRNOT00000023321
Uniprot:F1M117
Length = 366
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 88/158 (55%), Positives = 113/158 (71%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+ G + D VVM+DP TK SRGFGF+T S + V
Sbjct: 31 EPEQLRKLFIGGLSFETTDDSLREHFEKRGTLTDCVVMRDPQTKHSRGFGFVTSSCVEEV 90
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ VKK+FVGG+K D EE +LR+YF ++
Sbjct: 91 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLMVKKIFVGGIKEDTEEYNLRDYFEKY 150
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G E++ + KRGFAF+ F+D D VDKIV+ K
Sbjct: 151 GKTETIE--GRQAEWEKRGFAFVTFDDQDTVDKIVVQK 186
Score = 124 (48.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 25/83 (30%), Positives = 48/83 (57%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GG+ T + +L+ +FE++G+ + + KR GF F+T+ + VD +
Sbjct: 126 VKKIFVGGIKEDTEEYNLRDYFEKYGKTETIEGRQAEWEKR--GFAFVTFDDQDTVDKIV 183
Query: 76 SNRPHNIDGRVVETKRAVPRDEI 98
+ H I+G E KRA+ + E+
Sbjct: 184 VQKHHTINGHNCEVKRALSKQEM 206
>UNIPROTKB|F1M5L3 [details] [associations]
symbol:F1M5L3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC128353
EMBL:AC111733 IPI:IPI00358908 Ensembl:ENSRNOT00000041535
Uniprot:F1M5L3
Length = 364
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 88/158 (55%), Positives = 113/158 (71%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD+SL+ FE+ G + D VVM+DP TK SRGFGF+T S + V
Sbjct: 31 EPEQLRKLFIGGLSFETTDDSLREHFEKRGTLTDCVVMRDPQTKHSRGFGFVTSSCVEEV 90
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ VKK+FVGG+K D EE +LR+YF ++
Sbjct: 91 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLMVKKIFVGGIKEDTEEYNLRDYFEKY 150
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G E++ + KRGFAF+ F+D D VDKIV+ K
Sbjct: 151 GKTETIE--GRQAEWEKRGFAFVTFDDQDTVDKIVVQK 186
Score = 124 (48.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 25/83 (30%), Positives = 48/83 (57%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++K+F+GG+ T + +L+ +FE++G+ + + KR GF F+T+ + VD +
Sbjct: 126 VKKIFVGGIKEDTEEYNLRDYFEKYGKTETIEGRQAEWEKR--GFAFVTFDDQDTVDKIV 183
Query: 76 SNRPHNIDGRVVETKRAVPRDEI 98
+ H I+G E KRA+ + E+
Sbjct: 184 VQKHHTINGHNCEVKRALSKQEM 206
>UNIPROTKB|D4A6Z0 [details] [associations]
symbol:D4A6Z0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00948011
ProteinModelPortal:D4A6Z0 Ensembl:ENSRNOT00000067831 Uniprot:D4A6Z0
Length = 176
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 85/155 (54%), Positives = 117/155 (75%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE RK+FIGGL + TTD+SL+ F+ W + D VVM+DP T+RSRGFGF+ YS + V
Sbjct: 8 EPEQRRKLFIGGLSFETTDDSLREHFK-WDTLTDCVVMRDPQTERSRGFGFV-YSCVEEV 65
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DG VVE KRA+ R++ KP A+ VKK+FVGG+K D EE +LR+YF ++
Sbjct: 66 DAAMCARPHKVDGHVVEPKRAISREDSVKPGAHLMVKKIFVGGIKEDTEEYNLRDYF-EY 124
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G I+++ +V ++++G KRGFAF+ F+D+D VDKIV
Sbjct: 125 GNIKTIEVVEDRQSGKKRGFAFLTFDDHDTVDKIV 159
>UNIPROTKB|F1LYN9 [details] [associations]
symbol:F1LYN9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00368496
Ensembl:ENSRNOT00000035403 Uniprot:F1LYN9
Length = 263
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 84/152 (55%), Positives = 111/152 (73%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TTD+SL++ FEQW + D V+M+DP +KRSRGFG I Y+ + VD AM+
Sbjct: 1 KLFIGGLSFETTDKSLRSHFEQWETLTDCVLMRDPNSKRSRGFGLIAYATVEEVDAAMNA 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
RPH +DGRVVE K AV R++ +P A+ TVKK+FVGG K D EE LR YF Q+G IE +
Sbjct: 61 RPHKVDGRVVEPKVAVSREDSHRPGAHLTVKKIFVGGSKEDTEEHHLRVYFEQYGKIEVI 120
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
++T+ +G KRGFAF+ F+D D VD IV+ K
Sbjct: 121 EIMTDIGSGKKRGFAFVTFDDQDSVDNIVIQK 152
Score = 151 (58.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 27/100 (27%), Positives = 58/100 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD+
Sbjct: 89 TVKKIFVGGSKEDTEEHHLRVYFEQYGKIEVIEIMTDIGSGKKRGFAFVTFDDQDSVDNI 148
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGG 114
+ + H ++G E ++A+ + E+ ++ ++ V G
Sbjct: 149 VIQKYHTVNGHNCEVRKALLKQEMASASSSQRGRRRDVSG 188
>UNIPROTKB|E2RJS6 [details] [associations]
symbol:E2RJS6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03015762
Ensembl:ENSCAFT00000024318 Uniprot:E2RJS6
Length = 316
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 80/157 (50%), Positives = 116/157 (73%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FI GL + TTDESL++ FEQWG + VVM+DP TKRSRGFGF+ ++ + V
Sbjct: 9 EPEQLWKLFIRGLSFETTDESLRSHFEQWGTLTGCVVMRDPNTKRSRGFGFVMFATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RP+ ++GRV+E KR V R++ +P A TVKK+FVGG+K+ E+ +YF Q+G
Sbjct: 69 DAAMNARPNKVNGRVLEPKRFVSREDSQRPAAYLTVKKIFVGGIKEDTEEH-EDYFEQYG 127
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
E + ++T++ +G KRGFAF+ F+++D VD+IV+ K
Sbjct: 128 KFEVIEVMTDQGSGKKRGFAFVTFDNHDSVDQIVIQK 164
Score = 132 (51.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 27/95 (28%), Positives = 52/95 (54%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D + +++K+F+GG+ T E + +FEQ+G+ + VM D + + RGF F+
Sbjct: 92 REDSQRPAAYLTVKKIFVGGIKEDT--EEHEDYFEQYGKFEVIEVMTDQGSGKKRGFAFV 149
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ VD + + H ++G E ++A+ + E+
Sbjct: 150 TFDNHDSVDQIVIQKYHTVNGHSCEVRKALLKQEM 184
>UNIPROTKB|F1LZZ2 [details] [associations]
symbol:F1LZZ2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 IPI:IPI00556964
Ensembl:ENSRNOT00000044311 OMA:KERREDT Uniprot:F1LZZ2
Length = 294
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 81/155 (52%), Positives = 113/155 (72%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTD SL+ FE+WG + D VVM+DP K SRGF F+TYS + V
Sbjct: 32 EPEQLRKLFIGGLSFETTDGSLREHFEKWGTLTDCVVMRDPQRKCSRGFSFVTYSCVEEV 91
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
M RPH + G VVE KRAV R++ P A+ V+K+FVGG+K D EE +LR+YF ++
Sbjct: 92 GAVMCARPHKVVGCVVEPKRAVSREDSIIPGAHLMVEKIFVGGIKEDTEEYNLRDYFEKY 151
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
G IE++ ++ ++++G KRGFAF+ F+++D VDK+V
Sbjct: 152 GKIETIEVMEDRQSGKKRGFAFVTFDNHDTVDKVV 186
>UNIPROTKB|F1N235 [details] [associations]
symbol:F1N235 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:DAAA02006449 IPI:IPI01002976
Ensembl:ENSBTAT00000014868 OMA:LENGTGR Uniprot:F1N235
Length = 353
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 83/168 (49%), Positives = 117/168 (69%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+FIG L TT+ESL ++ QWG + D V+++DP +++SR FGFIT+S +
Sbjct: 16 ENEQFCKLFIGDLSSETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAEL 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQF 130
D AM+ RPH IDG++V KRAVPR++ GK A TVKK+FVGG+ +D +E LR+YF ++
Sbjct: 76 DAAMAARPHFIDGKMVMPKRAVPREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEKY 135
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G I ++ +VT+ ++G KRGF FI F+D+D VDKIVL K + R E
Sbjct: 136 GKINAIEIVTDGQSGKKRGFGFITFDDHDPVDKIVLQKNHTINGHRAE 183
Score = 153 (58.9 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 30/95 (31%), Positives = 55/95 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D K +++K+F+GG+ + L+ +FE++G+I + ++ D + + RGFGF
Sbjct: 98 PREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEKYGKINAIEIVTDGQSGKKRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
IT+ + VD + + H I+G E ++A+ R E
Sbjct: 158 ITFDDHDPVDKIVLQKNHTINGHRAEVRKALSRQE 192
>UNIPROTKB|F1MW51 [details] [associations]
symbol:F1MW51 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:DAAA02008023 IPI:IPI00696055
Ensembl:ENSBTAT00000016590 Uniprot:F1MW51
Length = 274
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 86/158 (54%), Positives = 115/158 (72%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQ G + D VV +DP KRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSRFEQGGTLTDCVVRRDPNAKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
RPH +D RVVE K A+ R++ +P A+ VKK+FVGG+K D EE LR+YF Q+
Sbjct: 69 ----KGRPH-VDERVVEPKWAISREDSQRPGAHLPVKKVFVGGIKEDTEEHHLRDYFEQY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T++ +G KRGFAFI F+D+D +DKIV+ K
Sbjct: 124 GRIEVIEIMTDQGSG-KRGFAFILFDDHDSIDKIVIQK 160
Score = 126 (49.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++KVF+GG+ T + L+ +FEQ+G I + +M D + + RGF FI + + +D +
Sbjct: 99 VKKVFVGGIKEDTEEHHLRDYFEQYGRIEVIEIMTDQGSGK-RGFAFILFDDHDSIDKIV 157
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGG 114
+ H +G E ++A+ + E+ ++ ++ F GG
Sbjct: 158 IQKYHTGNGLNCEVRKALSKQEMASASSS---QRDFGGG 193
>UNIPROTKB|D4AB76 [details] [associations]
symbol:D4AB76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00558881 ProteinModelPortal:D4AB76
Ensembl:ENSRNOT00000043240 Uniprot:D4AB76
Length = 306
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 83/157 (52%), Positives = 113/157 (71%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FIGGL ++TTDESL++ FEQWG + D V M+DP K SRGFGF+TY+ + +
Sbjct: 9 EPEQLWKLFIGGLSFKTTDESLRSHFEQWGTLTDCV-MRDPNNKISRGFGFVTYTTVEEL 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RPH +DG VVE KRAV R++ +P A+ TVKK+FVG +D E +F Q+G
Sbjct: 68 DAAMNARPHKVDGGVVEPKRAVSREDSPRPGAHLTVKKIFVGVKEDTEG----HHFEQYG 123
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE + ++T++ +G KRGFAF+ F+D D VD IV+ K
Sbjct: 124 KIEVIEIMTDRGSGKKRGFAFVTFDDPDSVDTIVIQK 160
Score = 113 (44.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 22/90 (24%), Positives = 49/90 (54%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+G +++ FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVG-----VKEDTEGHHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDPDSVDTI 156
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ E+ ++
Sbjct: 157 VIQKYHTVNGHNCEVRKALSNQELASASSS 186
>UNIPROTKB|F1PQB0 [details] [associations]
symbol:HNRNPA1L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
EMBL:AAEX03003034 Ensembl:ENSCAFT00000027199 Uniprot:F1PQB0
Length = 314
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 85/168 (50%), Positives = 117/168 (69%)
Query: 2 KPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
+P+ + K EPE L+K+FI GL + TDESL+ FEQWG + D VVM+DP TK SRGFG
Sbjct: 1 RPKSESPK--EPEQLQKLFIRGLSFEITDESLRTHFEQWGTLTDYVVMRDPNTKCSRGFG 58
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEE 120
+ + VD AM++RP + RV+E KRAV +++ +P TVKK+FVGG+K D EE
Sbjct: 59 AM-----EEVDAAMNSRPCKVGRRVLEPKRAVSQEDSPRPGVLLTVKKIFVGGIKEDTEE 113
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
LR+YF Q+G IE + +T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 114 HHLRDYFEQYGKIEVIESMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 161
Score = 121 (47.7 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + M D + + RGF F+T+ + VD
Sbjct: 98 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIESMTDRGSGKKRGFAFVTFDDHDSVDKI 157
Query: 75 MSNRPHNIDG--RVV 87
+ + H +G RVV
Sbjct: 158 VIQKYHAANGHNRVV 172
>UNIPROTKB|F6RSR1 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:DAAA02020383
IPI:IPI00687625 Ensembl:ENSBTAT00000022514 Uniprot:F6RSR1
Length = 310
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 81/168 (48%), Positives = 112/168 (66%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 7 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 67 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 126
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 127 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 174
Score = 135 (52.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 90 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 149
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 150 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 184
>UNIPROTKB|E2RBV8 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0032496 GO:GO:0006954 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0070935 GeneTree:ENSGT00700000104255 CTD:10949
KO:K12894 OMA:GPMKQNL EMBL:AAEX03007810 RefSeq:XP_538645.2
ProteinModelPortal:E2RBV8 Ensembl:ENSCAFT00000001730 GeneID:481524
KEGG:cfa:481524 NextBio:20856300 Uniprot:E2RBV8
Length = 310
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 81/168 (48%), Positives = 112/168 (66%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 135 (52.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>UNIPROTKB|Q13151 [details] [associations]
symbol:HNRNPA0 "Heterogeneous nuclear ribonucleoprotein A0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0017091
"AU-rich element binding" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=ISS;TAS] [GO:0006954
"inflammatory response" evidence=ISS] [GO:0032496 "response to
lipopolysaccharide" evidence=ISS] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 EMBL:CH471062 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0017091
GO:GO:0030529 GO:GO:0000398 eggNOG:COG0724 GO:GO:0070935
HOVERGEN:HBG002295 HOGENOM:HOG000234442 EMBL:U23803 EMBL:CR456986
EMBL:BC001008 EMBL:BC007271 EMBL:BC009284 EMBL:BC011972
EMBL:BC012980 EMBL:BC018949 EMBL:BC019271 EMBL:BC028976
EMBL:BC030249 IPI:IPI00011913 RefSeq:NP_006796.1 UniGene:Hs.645902
UniGene:Hs.96996 ProteinModelPortal:Q13151 SMR:Q13151 IntAct:Q13151
MINT:MINT-5001237 STRING:Q13151 PhosphoSite:Q13151 DMDM:8134660
REPRODUCTION-2DPAGE:Q13151 SWISS-2DPAGE:Q13151 PaxDb:Q13151
PeptideAtlas:Q13151 PRIDE:Q13151 DNASU:10949
Ensembl:ENST00000314940 GeneID:10949 KEGG:hsa:10949 UCSC:uc003lbt.3
CTD:10949 GeneCards:GC05M137114 HGNC:HGNC:5030 HPA:HPA036569
MIM:609409 neXtProt:NX_Q13151 PharmGKB:PA162391106
InParanoid:Q13151 KO:K12894 OMA:GPMKQNL OrthoDB:EOG4W6NX4
PhylomeDB:Q13151 GenomeRNAi:10949 NextBio:41601 Bgee:Q13151
CleanEx:HS_HNRNPA0 Genevestigator:Q13151 GermOnline:ENSG00000177733
Uniprot:Q13151
Length = 305
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 81/168 (48%), Positives = 112/168 (66%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 169
Score = 135 (52.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>UNIPROTKB|F1RH94 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:CU468422
Ensembl:ENSSSCT00000015648 Uniprot:F1RH94
Length = 315
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 81/168 (48%), Positives = 112/168 (66%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 7 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 67 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 126
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
GT+E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 127 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 174
Score = 135 (52.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 90 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV 149
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 150 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 184
>UNIPROTKB|F1LVU1 [details] [associations]
symbol:F1LVU1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00950080
Ensembl:ENSRNOT00000064004 Uniprot:F1LVU1
Length = 188
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 83/161 (51%), Positives = 118/161 (73%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LR++FIGGL + T ++SL+ FE G + D VVM+DP + FGF+TYS + V
Sbjct: 2 EPEQLRRLFIGGLSFETIEDSLREGFEM-GTLADCVVMRDP-----QSFGFVTYSCVEEV 55
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVVE KRAV R++ KP A+ TVK +FVGG+K D EE +LR+YF ++
Sbjct: 56 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVK-IFVGGIKEDAEEYNLRDYFEKY 114
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
G IE++ ++ ++++G KRGFAF+ F+D+D VDKIV++ T+
Sbjct: 115 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVNYHTI 155
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 26/81 (32%), Positives = 50/81 (61%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD + N
Sbjct: 92 KIFVGGIKEDAEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVN 151
Query: 78 RPHNIDGRVVETKRAVPRDEI 98
H I+G E ++A+ + E+
Sbjct: 152 Y-HTINGHNCEVRKALSKQEM 171
>UNIPROTKB|F1LW71 [details] [associations]
symbol:F1LW71 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00563710 ProteinModelPortal:F1LW71
Ensembl:ENSRNOT00000048553 Uniprot:F1LW71
Length = 260
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 83/158 (52%), Positives = 111/158 (70%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+F GGL++ TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 16 EPEQLRKLFTGGLNFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAPVEEV 75
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D + H + RAV R++ P A+ TVKK+FVGG+K D EE LR+Y Q+
Sbjct: 76 D----RKDHTRWMEELWNLRAVSREDSQTPGAHLTVKKIFVGGIKEDTEEHHLRDYSEQY 131
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE V ++T++ +G K GFAF+ F+D+D VDKIV+ K
Sbjct: 132 GKIEVVEIMTDRGSGKKGGFAFVTFDDHDSVDKIVIQK 169
Score = 136 (52.9 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 31/124 (25%), Positives = 66/124 (53%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ + EQ+G+I V +M D + + GF F+T+ + VD
Sbjct: 106 TVKKIFVGGIKEDTEEHHLRDYSEQYGKIEVVEIMTDRGSGKKGGFAFVTFDDHDSVDKI 165
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTI 133
+ + H ++G E ++A+ + E+ A+A+ + G ++ + + S FG +
Sbjct: 166 VIQKYHTVNGHNCEVRKALSKQEM----ASASFSQRGRSGSRNYNDFGNYNNQSSNFGPM 221
Query: 134 ESVN 137
+ N
Sbjct: 222 KGGN 225
>UNIPROTKB|E2RJS4 [details] [associations]
symbol:E2RJS4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03011786
Ensembl:ENSCAFT00000024319 Uniprot:E2RJS4
Length = 330
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 83/164 (50%), Positives = 117/164 (71%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
+PE L+K+FIGGL + TT+ESL++ FEQ G + D V M+DP TK SRGFGF+TY+ + V
Sbjct: 23 DPEQLQKLFIGGLSFETTNESLRSHFEQLGMLTDCVEMRDPNTKHSRGFGFVTYATMEEV 82
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-------LR 124
D A + RPH +D RVVE KRAV R++ +P A+ T+KK +++EEDD LR
Sbjct: 83 DAATNARPHKVD-RVVEPKRAVSREDSQRPGAHLTMKKKEE---EEEEEDDNNTEEYHLR 138
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 139 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 182
Score = 131 (51.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 27/93 (29%), Positives = 51/93 (54%)
Query: 25 DYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDG 84
D T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD + + H ++G
Sbjct: 129 DNNTEEYHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNG 188
Query: 85 RVVETKRAVPRDEIGKP---EANATVKKMFVGG 114
E ++A+ + E+ EA +++ F GG
Sbjct: 189 HNCEVRKALSKQEMASASAKEAKVVLERNFGGG 221
>MGI|MGI:1924384 [details] [associations]
symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IDA]
[GO:0017091 "AU-rich element binding" evidence=ISO;IDA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1924384
GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0030529 eggNOG:COG0724
HSSP:P09651 GO:GO:0070935 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 CTD:10949
KO:K12894 OrthoDB:EOG4W6NX4 EMBL:AK019388 EMBL:AC165251
IPI:IPI00109813 RefSeq:NP_084148.1 UniGene:Mm.490274
ProteinModelPortal:Q9CX86 SMR:Q9CX86 STRING:Q9CX86
PhosphoSite:Q9CX86 PaxDb:Q9CX86 PRIDE:Q9CX86
Ensembl:ENSMUST00000007980 GeneID:77134 KEGG:mmu:77134
UCSC:uc007qtf.2 InParanoid:Q9CX86 OMA:EDNQHAL ChiTaRS:HNRNPA0
NextBio:346544 Bgee:Q9CX86 Genevestigator:Q9CX86 Uniprot:Q9CX86
Length = 305
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 80/168 (47%), Positives = 110/168 (65%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQF
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +E ++ +K++G KRGF F+ F +D DK + K + RVE
Sbjct: 122 GAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVE 169
Score = 135 (52.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>UNIPROTKB|F1LYB2 [details] [associations]
symbol:F1LYB2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00563016
Ensembl:ENSRNOT00000051535 Uniprot:F1LYB2
Length = 261
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 79/158 (50%), Positives = 115/158 (72%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E L K+FIG L + TTD+SL+ E+W + D VVM+DP+ +RS GFGF+TYS + V
Sbjct: 19 ESEHLTKLFIGYLSFETTDDSLREHSEKW-TLTDCVVMRDPLFERSSGFGFVTYSCVEEV 77
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DGRVV RAV R++ KP + TVKK+FVGG++ D+EE +L++YF ++
Sbjct: 78 DAAMCARPHKVDGRVVGP-RAVSREDSVKPGTHLTVKKIFVGGVREDREEYNLKDYFEKY 136
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I +++++ ++++G KRGFAF+ F+D D VDKI + K
Sbjct: 137 GKIGTIDVMEDRQSGKKRGFAFVTFDDLDTVDKIAVQK 174
Score = 132 (51.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 27/92 (29%), Positives = 52/92 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ + +L+ +FE++G+I + VM+D + + RGF F+
Sbjct: 100 REDSVKPGTHLTVKKIFVGGVREDREEYNLKDYFEKYGKIGTIDVMEDRQSGKKRGFAFV 159
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
T+ + VD + H I+G E K+ + +
Sbjct: 160 TFDDLDTVDKIAVQKYHTINGHNCEMKKVLSK 191
>UNIPROTKB|D4ACP9 [details] [associations]
symbol:D4ACP9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00388048
ProteinModelPortal:D4ACP9 Ensembl:ENSRNOT00000002123 Uniprot:D4ACP9
Length = 253
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 83/159 (52%), Positives = 109/159 (68%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E L K+FIGGL + T+D+SL+ FEQW + VVM DP TKRSR FGF+TYS K V
Sbjct: 8 EQEQLSKLFIGGLSFETSDDSLREHFEQWDMLTHCVVM-DPQTKRSRVFGFVTYSCVKEV 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM RPH +DG VVE KR D + KP KK+F+GG+K D EE +LR+YF ++
Sbjct: 67 DAAMCARPHKVDGCVVEPKRPFREDSV-KPVVCLLAKKIFIGGIKEDTEEHNLRDYFEKY 125
Query: 131 GTIESVN-MVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE++ M ++++G KRGFAF+ F+D+ VDKIV+ K
Sbjct: 126 GKIETIEIMEEDRQSGEKRGFAFVTFDDHYTVDKIVVQK 164
Score = 127 (49.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 25/83 (30%), Positives = 49/83 (59%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMK-DPITKRSRGFGFITYSEAKMVDDAM 75
+K+FIGG+ T + +L+ +FE++G+I + +M+ D + RGF F+T+ + VD +
Sbjct: 102 KKIFIGGIKEDTEEHNLRDYFEKYGKIETIEIMEEDRQSGEKRGFAFVTFDDHYTVDKIV 161
Query: 76 SNRPHNIDGRVVETKRAVPRDEI 98
+ H I+ + K+A + E+
Sbjct: 162 VQKCHTINRHNCDVKKAPSKQEM 184
>UNIPROTKB|F1M7F0 [details] [associations]
symbol:F1M7F0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00563307
ProteinModelPortal:F1M7F0 Ensembl:ENSRNOT00000041604 Uniprot:F1M7F0
Length = 224
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 77/158 (48%), Positives = 111/158 (70%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+ IGGL ++TT ESL+ FE+WG D VVM+DP TKRSR GF+TY+ + V
Sbjct: 18 EPEQLHKLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSGFVTYNTVEEV 77
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RP +DGR+V+ KRAV R++ +P TVKK+F GG+K D EE ++R+YF +
Sbjct: 78 DAAMNARPQKMDGRLVKPKRAVSREDSQRPGTQLTVKKIFEGGIKEDTEEHNVRDYFEHY 137
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I+ + ++T++ +G K+ FA + +D+D VDKI + K
Sbjct: 138 GKIDMIEIMTDRSSG-KKEFALVPLDDHDSVDKIAIQK 174
>UNIPROTKB|F1M0H6 [details] [associations]
symbol:F1M0H6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00766574
Ensembl:ENSRNOT00000044621 Uniprot:F1M0H6
Length = 360
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 85/158 (53%), Positives = 113/158 (71%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + T D+SL+ F++ G + D VVM+DP TK SRGFGF+TYS + V
Sbjct: 27 EPEQLRKLFIGGLSFETADDSLREHFKKRGTLTDCVVMRDPQTKCSRGFGFVTYSCVEEV 86
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM H +DGRVVE K+AV R++ K A+ VKK FVGG+K D EE +L++YF ++
Sbjct: 87 DAAMCAWLHKVDGRVVEPKKAVSREDSVKLGAHLMVKKTFVGGIKEDTEEYNLKDYFEKY 146
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE+ M N+++G +RGFAF F D+DV DKIV+ K
Sbjct: 147 GKIETEGM-ENRQSG-RRGFAFAIFGDHDV-DKIVVQK 181
Score = 108 (43.1 bits), Expect = 0.00052, P = 0.00052
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + DD LRE+F + GT+ ++ + +T RGF F+ ++ +
Sbjct: 25 PKEPEQLRKLFIGGLSFETADDSLREHFKKRGTLTDCVVMRDPQTKCSRGFGFVTYSCVE 84
Query: 160 VVDKIVLSKITLLLDRRVE 178
VD + + + + R VE
Sbjct: 85 EVDAAMCAWLHKVDGRVVE 103
>UNIPROTKB|F1NCI5 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:EDNQHAL EMBL:AADN02028465
IPI:IPI00573116 Ensembl:ENSGALT00000009947 Uniprot:F1NCI5
Length = 328
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/168 (47%), Positives = 110/168 (65%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E L K+FIGGL+ +TT+ L+ F +G + D VV+ +P TKRSR FGF+TYS +
Sbjct: 23 ENSQLCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEA 82
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ PH +DG VE KRAV R++ KP A+A VKK+FVGGLK D E DL ++FSQF
Sbjct: 83 DAAMAASPHAVDGNSVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQF 142
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G +E ++ +K++G KRGF F+ F ++D DK + K + RVE
Sbjct: 143 GPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 190
Score = 137 (53.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D +K ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 106 REDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQFGPVEKAEIIADKQSGKKRGFGFV 165
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 166 YFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 200
>UNIPROTKB|F1M4M4 [details] [associations]
symbol:F1M4M4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 IPI:IPI00558004
Ensembl:ENSRNOT00000049169 Uniprot:F1M4M4
Length = 255
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 78/158 (49%), Positives = 112/158 (70%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL +RTT+ESL++ FEQW ++ VVM+DP T+RSRG GF TY+ + +
Sbjct: 14 EPEQLRKLFIGGLSFRTTEESLRSHFEQWATLITCVVMRDPNTERSRGSGFDTYTTVEEM 73
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVV R++ +P A+ TVK +F+ G+K D EE LR+YF Q+
Sbjct: 74 DAAMNARPHKVDGRVVS------REDSQRPGAHLTVK-IFISGIKEDTEEHHLRDYFEQY 126
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE + ++T++ + KR FAF+ F+++D VDKI + K
Sbjct: 127 RKIEVIEIMTDRGSRKKRDFAFVTFDEHDSVDKIFIQK 164
Score = 130 (50.8 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 24/87 (27%), Positives = 48/87 (55%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FI G+ T + L+ +FEQ+ +I + +M D +++ R F F+T+ E VD
Sbjct: 104 KIFISGIKEDTEEHHLRDYFEQYRKIEVIEIMTDRGSRKKRDFAFVTFDEHDSVDKIFIQ 163
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ H ++G E ++A+ + E+ ++
Sbjct: 164 KYHTVNGHNCEVRKALSKQEMASASSS 190
>UNIPROTKB|F1M165 [details] [associations]
symbol:F1M165 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00362409 Ensembl:ENSRNOT00000029622
Uniprot:F1M165
Length = 288
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 78/158 (49%), Positives = 110/158 (69%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL +RTT+ESL++ FEQW ++ VVM+DP T+RSRG GF TY+ + +
Sbjct: 10 EPEQLRKLFIGGLSFRTTEESLRSHFEQWATLITCVVMRDPNTERSRGSGFDTYTTVEEM 69
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +DGRVV R++ +P A+ TVK V G+K D EE LR+YF Q+
Sbjct: 70 DAAMNARPHKVDGRVVS------REDSQRPGAHLTVKIFIVSGIKEDTEEHHLRDYFEQY 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE + ++T++ + KR FAF+ F+++D VDKI + K
Sbjct: 124 RKIEVIEIMTDRGSRKKRDFAFVTFDEHDSVDKIFIQK 161
Score = 121 (47.7 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 18 KVFI-GGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
K+FI G+ T + L+ +FEQ+ +I + +M D +++ R F F+T+ E VD
Sbjct: 100 KIFIVSGIKEDTEEHHLRDYFEQYRKIEVIEIMTDRGSRKKRDFAFVTFDEHDSVDKIFI 159
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ H ++G E ++A+ + E+ ++
Sbjct: 160 QKYHTVNGHNCEVRKALSKQEMASASSS 187
>UNIPROTKB|E2QXH4 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:AAEX03009384
ProteinModelPortal:E2QXH4 Ensembl:ENSCAFT00000004613 Uniprot:E2QXH4
Length = 301
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 72/121 (59%), Positives = 97/121 (80%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP +KRSRGFGF+T+S VD AM+ RPH+IDGRVVE KRAV R+E GKP A+ TVK
Sbjct: 1 MRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D EE LR+YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKIVL
Sbjct: 61 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 120
Query: 168 K 168
K
Sbjct: 121 K 121
Score = 151 (58.2 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 26/90 (28%), Positives = 57/90 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD
Sbjct: 58 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 117
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H I+G E ++A+ R E+ + +++
Sbjct: 118 VLQKYHTINGHNAEVRKALSRQEMQEVQSS 147
>UNIPROTKB|D4ABW2 [details] [associations]
symbol:D4ABW2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00781059 ProteinModelPortal:D4ABW2
Ensembl:ENSRNOT00000044642 Uniprot:D4ABW2
Length = 279
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 83/160 (51%), Positives = 110/160 (68%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQ--AFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAK 69
EPE L+K+F+GGL + T ESL + FEQWG + D VVM+DP TKRSRGFGF+TY+ +
Sbjct: 9 EPEQLQKLFVGGLSFEATLESLSLTSHFEQWGTLTDHVVMRDPNTKRSRGFGFVTYATVE 68
Query: 70 MVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 128
VD AM+ RPH + GR VE KRA +D +P A+ T+KK+FVGG+K D EE LR+Y
Sbjct: 69 EVDAAMNARPHKVGGRAVEPKRAGSKDS-QRPGAHLTMKKIFVGGVKEDTEEHRLRDYLE 127
Query: 129 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
Q G E + T++ +G KR FAF+ F++ VDKIV+ K
Sbjct: 128 QNGKTEVTEITTDRGSG-KRDFAFVTFDNS--VDKIVIQK 164
>UNIPROTKB|F1MTY3 [details] [associations]
symbol:F1MTY3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:DAAA02006340
IPI:IPI00699446 Ensembl:ENSBTAT00000013110 Uniprot:F1MTY3
Length = 301
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 81/158 (51%), Positives = 105/158 (66%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP LRK+FIGGL + TTDESL++ V M DP TK SRGF F+TY+ + V
Sbjct: 9 EPGQLRKLFIGGLSFETTDESLRSHCSHSPSCV----MTDPNTKCSRGFRFVTYATVEEV 64
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +D RVVE KR V R+ +P A+ TVKK+F GG+K D EE LR+YF
Sbjct: 65 DAAMNARPHKVDRRVVEPKRGVSREGSQRPGAHLTVKKIFAGGIKEDTEERHLRDYFENN 124
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T+ +G KRGFAF+ F+D+D VDK V+ K
Sbjct: 125 GKIEVIEIMTDPSSGKKRGFAFVTFDDHDSVDKTVIQK 162
Score = 143 (55.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 25/90 (27%), Positives = 52/90 (57%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F GG+ T + L+ +FE G+I + +M DP + + RGF F+T+ + VD
Sbjct: 99 TVKKIFAGGIKEDTEERHLRDYFENNGKIEVIEIMTDPSSGKKRGFAFVTFDDHDSVDKT 158
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 159 VIQKYHTVNGHNREVRKALSKQEMASASSS 188
>UNIPROTKB|F1MH29 [details] [associations]
symbol:F1MH29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:DAAA02006340
IPI:IPI00839326 Ensembl:ENSBTAT00000046159 Uniprot:F1MH29
Length = 241
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 81/158 (51%), Positives = 106/158 (67%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP LRK+FIGGL + TTDESL++ V M DP TK SRGF F+TY+ + V
Sbjct: 8 EPGQLRKLFIGGLSFETTDESLRSHCSHSPSCV----MTDPNTKCSRGFRFVTYATVEEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +D RVVE KR V R+ +P A+ TVKK+F GG+K D EE LR+YF +
Sbjct: 64 DAAMNARPHKVDRRVVEPKRGVSREGSQRPGAHLTVKKIFAGGIKEDTEERHLRDYFEKP 123
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G IE + ++T+ +G KRGFAF+ F+D+D VDK V+ K
Sbjct: 124 GKIEVIEIMTDPSSGKKRGFAFVTFDDHDSVDKTVIQK 161
Score = 130 (50.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F GG+ T + L+ +FE+ G+I + +M DP + + RGF F+T+ + VD
Sbjct: 98 TVKKIFAGGIKEDTEERHLRDYFEKPGKIEVIEIMTDPSSGKKRGFAFVTFDDHDSVDKT 157
Query: 75 MSNRPHNIDGRVVETKRA 92
+ + H ++G E R+
Sbjct: 158 VIQKYHTVNGHNRERGRS 175
>UNIPROTKB|F1M3H8 [details] [associations]
symbol:F1M3H8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 IPI:IPI00777708
ProteinModelPortal:F1M3H8 PRIDE:F1M3H8 Ensembl:ENSRNOT00000061231
Uniprot:F1M3H8
Length = 194
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 77/165 (46%), Positives = 106/165 (64%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
SL V IG + +T++ L+ FE +G + D VV+ +P TKRSR FGF+TYS + D A
Sbjct: 5 SLCGVLIGEXNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAA 64
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTI 133
M+ PH +DG VE KRAV R++ +P A+A VKK+FVGGLK D E DL E+FSQFG +
Sbjct: 65 MAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAV 124
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E ++ +K++G KRGF F+ F +D DK + K + RVE
Sbjct: 125 EKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVE 169
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 85 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFV 144
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 145 YFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 179
>UNIPROTKB|F1PP12 [details] [associations]
symbol:F1PP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:AAEX03007418
ProteinModelPortal:F1PP12 Ensembl:ENSCAFT00000029311 Uniprot:F1PP12
Length = 229
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 74/158 (46%), Positives = 111/158 (70%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ L ++FI GL++ TT+ESL+ F+QWG ++D VVM DP T+ SR FGF+ Y+ + V
Sbjct: 9 EPKQLWRLFIRGLNFETTNESLRGHFKQWGILMDCVVMIDPNTRHSRRFGFVMYATVEKV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D A++ RPH ++ R+ + K AV R++ +P A+ T KK FVGG+K D EE LR YF Q+
Sbjct: 69 DAAVNVRPHKVN-RIGKPKMAVSREDSQRPGAHLTGKKTFVGGIKEDTEEHHLRHYFEQY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G I + ++T++ + KRGFAF+ +D+D +DKIV+ K
Sbjct: 128 GEIRMIEIMTDQGSDKKRGFAFVTCDDHDSIDKIVIQK 165
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 30/100 (30%), Positives = 53/100 (53%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K F+GG+ T + L+ +FEQ+GEI + +M D + + RGF F+T + +D +
Sbjct: 104 KKTFVGGIKEDTEEHHLRHYFEQYGEIRMIEIMTDQGSDKKRGFAFVTCDDHDSIDKIVI 163
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM--FVGG 114
+ H ++G E +RA+ + E+ + K F GG
Sbjct: 164 QKQHTVNGHNYEVRRALSKQEMASASTSRRSKGSGNFDGG 203
>UNIPROTKB|F1LUF2 [details] [associations]
symbol:F1LUF2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 IPI:IPI00952415
Ensembl:ENSRNOT00000042380 Uniprot:F1LUF2
Length = 238
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 77/152 (50%), Positives = 102/152 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TDE L++ FEQWG + + VVM+DP TKRS GFGF+TY+ + VD AM+
Sbjct: 1 KLFIGGLSFEKTDEGLRSHFEQWGTLTNSVVMRDPNTKRSGGFGFVTYATVEEVDAAMNE 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
RPH +D RV+E KRAV R++ + + TVKK+FVG +K D EE LR+YF Q+G I+
Sbjct: 61 RPHKVDERVLEPKRAVSREDSERTGTHLTVKKIFVGVVKEDTEEHHLRDYFEQYGKIQ-- 118
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
K GF F F+D+D VDKIV+ K
Sbjct: 119 ------RQWKKEGFCFFTFDDHDSVDKIVIQK 144
>UNIPROTKB|F1LW17 [details] [associations]
symbol:F1LW17 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 IPI:IPI00567724
Ensembl:ENSRNOT00000046658 ArrayExpress:F1LW17 Uniprot:F1LW17
Length = 249
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 80/156 (51%), Positives = 109/156 (69%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
TE E LRK+FIGGL + TTD+SL+ FE+WG + D KRSRGFGF+TYS +
Sbjct: 27 TEKE-LRKLFIGGLSFETTDDSLREHFEKWGTLTDCG------NKRSRGFGFLTYSCVEE 79
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
VD A+ RPH RVV KRAV R++ KP A+ VKK++VGG+K D EE +LR YF +
Sbjct: 80 VDAAVCARPHKAAVRVVG-KRAVSREDSVKPGAHLMVKKLYVGGIKEDTEEYNLRGYFKK 138
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+G IE++ ++ +++G KRGFAF+ F+D+D VDKI+
Sbjct: 139 YGKIETIEVMEGRQSGKKRGFAFVTFDDHDTVDKIL 174
>UNIPROTKB|F1LUE7 [details] [associations]
symbol:F1LUE7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00566822
Ensembl:ENSRNOT00000052211 ArrayExpress:F1LUE7 Uniprot:F1LUE7
Length = 256
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 77/151 (50%), Positives = 106/151 (70%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
LRK+FIGGL + TTD+SL+ FE+WG + D KRSRGFGF+TYS + VD A+
Sbjct: 1 LRKLFIGGLSFETTDDSLREHFEKWGTLTDCG------NKRSRGFGFLTYSCVEEVDAAV 54
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE 134
RPH RVV KRAV R++ KP A+ VKK++VGG+K D EE +LR YF ++G IE
Sbjct: 55 CARPHKAAVRVVG-KRAVSREDSVKPGAHLMVKKLYVGGIKEDTEEYNLRGYFKKYGKIE 113
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ ++ +++G KRGFAF+ F+D+D VDKI+
Sbjct: 114 TIEVMEGRQSGKKRGFAFVTFDDHDTVDKIL 144
>UNIPROTKB|F1LXW0 [details] [associations]
symbol:F1LXW0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 IPI:IPI00212167 Ensembl:ENSRNOT00000008039
Uniprot:F1LXW0
Length = 293
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 80/158 (50%), Positives = 104/158 (65%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+F G L + TTDESL++ FEQW VM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLWKLFTGALSFETTDESLRSHFEQW--TTHCGVMRDPNTKRSRGFGFVTYATVEEV 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D M+ RPH +DGRVVE KRAV R++ +P A+ VK +FVGG+K D EE LR+Y Q
Sbjct: 67 DAVMNARPHKVDGRVVEPKRAVSREDSQRPGAHLAVK-IFVGGIKEDTEEHHLRDYSEQN 125
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G + ++ KRGFA + F+ +D VDKIV+ K
Sbjct: 126 GKKQ-------RQWKKKRGFALVTFDAHDSVDKIVIQK 156
>FB|FBgn0010258 [details] [associations]
symbol:Rbp4 "RNA-binding protein 4" species:7227 "Drosophila
melanogaster" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003727
"single-stranded RNA binding" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0003729 "mRNA binding"
evidence=ISS;NAS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0003729
GO:GO:0003727 Gene3D:3.30.70.330 HSSP:P09651 EMBL:U18401
ProteinModelPortal:Q24024 SMR:Q24024 IntAct:Q24024 PRIDE:Q24024
FlyBase:FBgn0010258 eggNOG:NOG289504 InParanoid:Q24024
OrthoDB:EOG4CNP6S Bgee:Q24024 Uniprot:Q24024
Length = 428
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 76/179 (42%), Positives = 113/179 (63%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E LRK+FIGGL +TT E+L+ FF Q+G + D VV++DP++ SRGFGF+TY + K V+
Sbjct: 29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEI 88
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE------IGKP------EAN-ATVKKMFVGGLKDQEE 120
RPH ID ++VETK A+PR + +G EA K++F+GGLK+ +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHD 148
Query: 121 DDL-REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+++ REYFSQFG + SV ++ ++ETG +R F F+EF D +K + + +L VE
Sbjct: 149 ENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVE 207
Score = 119 (46.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 17 RKVFIGGL-DYRTTDESL-QAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++F+GGL +Y DE++ + +F Q+G + V ++ D T R R FGF+ + + + A
Sbjct: 136 KRIFLGGLKEYH--DENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKA 193
Query: 75 MSNRPHNIDGRVVETKRAVPR 95
++ R H I +VE KR+ +
Sbjct: 194 LAPRKHWILQTLVEVKRSTQK 214
>UNIPROTKB|F8W646 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022306
ProteinModelPortal:F8W646 SMR:F8W646 PRIDE:F8W646
Ensembl:ENST00000547708 ArrayExpress:F8W646 Bgee:F8W646
Uniprot:F8W646
Length = 156
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 67/103 (65%), Positives = 83/103 (80%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGG 114
D AM+ RPH +DGRVVE KRAV R++ +P A+ TVKK+FVGG
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGG 111
Score = 102 (41.0 bits), Expect = 0.00023, P = 0.00023
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>UNIPROTKB|F1M0Q5 [details] [associations]
symbol:F1M0Q5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00559641
ProteinModelPortal:F1M0Q5 Ensembl:ENSRNOT00000036216 Uniprot:F1M0Q5
Length = 165
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 68/137 (49%), Positives = 97/137 (70%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+ IGGL ++TT ESL+ FE+WG D VVM+DP TKRSR GF+TY+ + V
Sbjct: 28 EPEQLHKLCIGGLIFKTTHESLRNHFEKWGTFTDCVVMRDPNTKRSRSSGFVTYNTVEEV 87
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RP +DGR+V+ KRAV R++ +P TVKK+F GG+K D EE ++R+YF +
Sbjct: 88 DAAMNARPQKMDGRLVKPKRAVSREDSQRPGTQLTVKKIFEGGIKEDTEEHNVRDYFEHY 147
Query: 131 GTIESVNMVTNKETGAK 147
G I+ + ++T++ +G K
Sbjct: 148 GKIDMIEIMTDRSSGKK 164
>UNIPROTKB|E1BK61 [details] [associations]
symbol:E1BK61 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:DAAA02005585 IPI:IPI00689266
Ensembl:ENSBTAT00000016960 Uniprot:E1BK61
Length = 270
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 78/157 (49%), Positives = 107/157 (68%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
PE LRK+FI GL + T DESL + FE G+ +VVM+ P TK SRGFGF+T + +
Sbjct: 6 PEELRKLFIRGLSFETIDESLSSHFEM-GKAHRLVVMRVPNTKHSRGFGFVTKPWWRSLA 64
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFG 131
AM+ RPH +D RVVE KR V R + +P A+ TVKK+FVGG+++ EE LR F Q+G
Sbjct: 65 -AMNARPHKVDERVVEPKRDVSRGDSQRPHAHLTVKKIFVGGIQEGTEEHHLRNNFEQYG 123
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
I+ + ++T++ + KRGFAF F+D+D VDKIV+ K
Sbjct: 124 KID-IEIMTDRGSDKKRGFAFETFDDHDSVDKIVIQK 159
Score = 138 (53.6 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 26/90 (28%), Positives = 52/90 (57%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ FEQ+G+I D+ +M D + + RGF F T+ + VD
Sbjct: 97 TVKKIFVGGIQEGTEEHHLRNNFEQYGKI-DIEIMTDRGSDKKRGFAFETFDDHDSVDKI 155
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E + A+ + E+ ++
Sbjct: 156 VIQKYHTVNGHNCEVREALSKQEMASASSS 185
>UNIPROTKB|G3MYU0 [details] [associations]
symbol:G3MYU0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:DAAA02005585
Ensembl:ENSBTAT00000064368 Uniprot:G3MYU0
Length = 256
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 78/157 (49%), Positives = 107/157 (68%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
PE LRK+FI GL + T DESL + FE G+ +VVM+ P TK SRGFGF+T + +
Sbjct: 22 PEELRKLFIRGLSFETIDESLSSHFEM-GKAHRLVVMRVPNTKHSRGFGFVTKPWWRSLA 80
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFG 131
AM+ RPH +D RVVE KR V R + +P A+ TVKK+FVGG+++ EE LR F Q+G
Sbjct: 81 -AMNARPHKVDERVVEPKRDVSRGDSQRPHAHLTVKKIFVGGIQEGTEEHHLRNNFEQYG 139
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
I+ + ++T++ + KRGFAF F+D+D VDKIV+ K
Sbjct: 140 KID-IEIMTDRGSDKKRGFAFETFDDHDSVDKIVIQK 175
Score = 137 (53.3 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 26/84 (30%), Positives = 50/84 (59%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ FEQ+G+I D+ +M D + + RGF F T+ + VD
Sbjct: 113 TVKKIFVGGIQEGTEEHHLRNNFEQYGKI-DIEIMTDRGSDKKRGFAFETFDDHDSVDKI 171
Query: 75 MSNRPHNIDGRVVETKRAVPRDEI 98
+ + H ++G E + A+ + E+
Sbjct: 172 VIQKYHTVNGHNCEVREALSKQEM 195
>UNIPROTKB|E2RF37 [details] [associations]
symbol:E2RF37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:AAEX03000660
Ensembl:ENSCAFT00000003502 OMA:MAMCSAN Uniprot:E2RF37
Length = 330
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 68/131 (51%), Positives = 96/131 (73%)
Query: 39 QWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+WG + D VVM+DP TK SRGF F+TY+ + VD AM+ RPH +D RVVE K+AV R++
Sbjct: 2 KWGMLTDCVVMRDPNTKCSRGFEFLTYATVEDVDAAMNVRPHKVDERVVELKKAVSREDS 61
Query: 99 GKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 157
+P A+ TVKK+FVGG+K D E+ LR+YF +G IE + ++T++ +G KR FAF+ F+
Sbjct: 62 QRPGAHLTVKKIFVGGIKEDTEQHHLRDYFEHYGKIEVIEIMTDRGSGNKRSFAFVTFDA 121
Query: 158 YDVVDKIVLSK 168
+D VDKIV+ K
Sbjct: 122 HDSVDKIVIQK 132
Score = 128 (50.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 23/90 (25%), Positives = 49/90 (54%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T L+ +FE +G+I + +M D + R F F+T+ VD
Sbjct: 69 TVKKIFVGGIKEDTEQHHLRDYFEHYGKIEVIEIMTDRGSGNKRSFAFVTFDAHDSVDKI 128
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 129 VIQKYHTVNGHNCEVRKALLKQEMASASSS 158
>UNIPROTKB|F1N7Z3 [details] [associations]
symbol:F1N7Z3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 IPI:IPI00696055 EMBL:DAAA02008074
Ensembl:ENSBTAT00000056782 Uniprot:F1N7Z3
Length = 268
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 75/158 (47%), Positives = 102/158 (64%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L+K+FI GL + TT E L++ FEQWG + D VV +DP KR G G E K
Sbjct: 2 EPEQLQKLFIRGLSFETTHEGLRSRFEQWGTLTDCVVRRDPNAKRHGGGG-----ERKAT 56
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
+DGRVV+ KRAV R++ +P A+ VKK+FVGG+K D EE LR+YF Q+
Sbjct: 57 Q---------VDGRVVKPKRAVSREDSQRPGAHLPVKKVFVGGIKEDTEEHHLRDYFEQY 107
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G E + ++T++ +G KRGF F+ F+D+D VDKIV+ K
Sbjct: 108 GKTEVIEIITDQGSGKKRGFVFVTFDDHDSVDKIVIQK 145
Score = 128 (50.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 24/89 (26%), Positives = 51/89 (57%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
++KVF+GG+ T + L+ +FEQ+G+ + ++ D + + RGF F+T+ + VD +
Sbjct: 83 VKKVFVGGIKEDTEEHHLRDYFEQYGKTEVIEIITDQGSGKKRGFVFVTFDDHDSVDKIV 142
Query: 76 SNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ H +G E ++A+ + E+ ++
Sbjct: 143 IQKYHTGNGLNCEVRKALSKQEMASASSS 171
>UNIPROTKB|F8VYN5 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0000380 EMBL:AC078778 HGNC:HGNC:5031
ChiTaRS:HNRNPA1 IPI:IPI00644968 ProteinModelPortal:F8VYN5
SMR:F8VYN5 PRIDE:F8VYN5 Ensembl:ENST00000550994 ArrayExpress:F8VYN5
Bgee:F8VYN5 Uniprot:F8VYN5
Length = 113
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 65/112 (58%), Positives = 88/112 (78%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSRGFGF+TY+ + VD AM+ RPH +DGRVVE KRAV R++ +P A+ TVK
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVK 60
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
K+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+D
Sbjct: 61 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHD 112
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ +
Sbjct: 58 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDD 110
>POMBASE|SPBC660.15 [details] [associations]
symbol:SPBC660.15 "mRNA cleavage factor complex subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding"
evidence=NAS] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005849 "mRNA cleavage factor
complex" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 PomBase:SPBC660.15 GO:GO:0005737 GO:GO:0000166
EMBL:CU329671 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
eggNOG:COG0724 GO:GO:0006379 GO:GO:0005849 KO:K14411 HSSP:Q14103
OrthoDB:EOG4TF3VC PIR:T40627 RefSeq:NP_595094.1
ProteinModelPortal:O94432 SMR:O94432 STRING:O94432
EnsemblFungi:SPBC660.15.1 GeneID:2541150 KEGG:spo:SPBC660.15
OMA:CHKANDG NextBio:20802263 Uniprot:O94432
Length = 474
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 69/165 (41%), Positives = 111/165 (67%)
Query: 1 MKPRYDDSKCTEPESLR--KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSR 58
M+ D+++ T P + K+FIGGL++ TTD+SL+ +FEQ+GE++D VM+D T RSR
Sbjct: 145 MESNEDNAEETSPFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSR 204
Query: 59 GFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-D 117
GFGF+T+ K V++ MS + H++DG++++ KRA+PR+E E A KMFVGG+ D
Sbjct: 205 GFGFLTFKNPKCVNEVMS-KEHHLDGKIIDPKRAIPREE---QEKTA---KMFVGGVPGD 257
Query: 118 QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
E++ R +F+QFG + ++ +K+TG RGF F+ + + V+
Sbjct: 258 CTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVE 302
Score = 175 (66.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 35/84 (41%), Positives = 48/84 (57%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T+E + FF Q+G ++D +M D T R RGFGF+TY V
Sbjct: 242 EQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAV 301
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
+ MS I G+ VE KRA P+
Sbjct: 302 EATMSQPYITIHGKPVEVKRATPK 325
Score = 122 (48.0 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 109 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL + DD LR+YF QFG + ++ + TG RGF F+ F + V++ V+S
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNE-VMS 222
Query: 168 K 168
K
Sbjct: 223 K 223
>UNIPROTKB|J9P972 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
Ensembl:ENSCAFT00000049246 Uniprot:J9P972
Length = 258
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 68/165 (41%), Positives = 104/165 (63%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+LRK+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 53 ALRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 112
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTI 133
+++RPH +DGR ++ K+ PR + N+ K+FVGG+ E +LREYF +FG +
Sbjct: 113 LASRPHTLDGRNIDPKQKGPRSD------NSKSNKIFVGGIPHNCGETELREYFKKFGVV 166
Query: 134 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 167 TEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 211
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 37/94 (39%), Positives = 60/94 (63%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 132 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 185
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 186 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 219
Score = 131 (51.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 103 ANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 161
A A ++K+FVGGL ++ LR YFSQ+G + ++ +K T RGF F++F D + V
Sbjct: 50 AQAALRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 109
Query: 162 DKIVLSKITLLLDRRVE 178
++ S+ L R ++
Sbjct: 110 GTVLASRPHTLDGRNID 126
>FB|FBgn0260943 [details] [associations]
symbol:Rbp6 "RNA-binding protein 6" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
EMBL:AE014296 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 eggNOG:COG0724 KO:K14411 GeneTree:ENSGT00700000104255
GO:GO:0048864 OMA:ENYISAA EMBL:AY122226 EMBL:S51715 PIR:F48110
RefSeq:NP_001097631.1 RefSeq:NP_001097632.1 RefSeq:NP_730245.2
UniGene:Dm.22292 HSSP:Q61474 ProteinModelPortal:Q9VVE5 SMR:Q9VVE5
DIP:DIP-19056N IntAct:Q9VVE5 MINT:MINT-918255
EnsemblMetazoa:FBtr0075285 GeneID:39919 KEGG:dme:Dmel_CG32169
UCSC:CG32169-RA CTD:39919 FlyBase:FBgn0260943 InParanoid:Q9VVE5
OrthoDB:EOG4MSBF6 GenomeRNAi:39919 NextBio:816085 Bgee:Q9VVE5
Uniprot:Q9VVE5
Length = 369
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 67/153 (43%), Positives = 98/153 (64%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++T+ ESL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 25 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 84
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFG 131
++ H +DG+ V+ K A PR P+ KK+FVGGL +D++ YF QFG
Sbjct: 85 KVLTQGTHELDGKKVDPKVAFPRR--AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 142
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 143 PIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 175
Score = 177 (67.4 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++++FEQ+G I D ++M D T R RGFGF+T+ +VD
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H I+ ++VE K+A P++
Sbjct: 178 IHFHEINNKMVECKKAQPKE 197
Score = 121 (47.7 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 109 KMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL Q + LR+YF ++G I ++ + T RGF F+ F+D + VDK VL+
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK-VLT 88
Query: 168 KITLLLD-RRVE 178
+ T LD ++V+
Sbjct: 89 QGTHELDGKKVD 100
>SGD|S000005483 [details] [associations]
symbol:HRP1 "Subunit of cleavage factor I" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA]
[GO:0005849 "mRNA cleavage factor complex" evidence=IPI]
[GO:0006379 "mRNA cleavage" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 SGD:S000005483
EMBL:BK006948 GO:GO:0000184 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0010494 eggNOG:COG0724
GO:GO:0006379 GO:GO:0005849 KO:K14411 GeneTree:ENSGT00700000104255
EMBL:U35737 EMBL:U38535 EMBL:X95258 EMBL:Z74865 PIR:S66820
RefSeq:NP_014518.1 PDB:2CJK PDB:2KM8 PDBsum:2CJK PDBsum:2KM8
ProteinModelPortal:Q99383 SMR:Q99383 DIP:DIP-1371N IntAct:Q99383
MINT:MINT-395353 STRING:Q99383 PaxDb:Q99383 PeptideAtlas:Q99383
EnsemblFungi:YOL123W GeneID:853997 KEGG:sce:YOL123W CYGD:YOL123w
HOGENOM:HOG000248803 OMA:AREEQDK OrthoDB:EOG4TF3VC
EvolutionaryTrace:Q99383 NextBio:975491 Genevestigator:Q99383
GermOnline:YOL123W Uniprot:Q99383
Length = 534
Score = 345 (126.5 bits), Expect = 4.0e-31, P = 4.0e-31
Identities = 65/162 (40%), Positives = 107/162 (66%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TT+++L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VD+ +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESV 136
+ H +DG+V++ KRA+PRDE K K+FVGG+ D + E+FSQ+GTI
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQDK------TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDA 272
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ D VD++ +K DR++E
Sbjct: 273 QLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 314
Score = 173 (66.0 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + K+F+GG+ + + FF QWG I+D +M D T +SRGFGF+TY A V
Sbjct: 238 EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV 297
Query: 72 DDAMSNRPHNIDGRVVETKRAVPR 95
D N+ + R +E KRA PR
Sbjct: 298 DRVCQNKFIDFKDRKIEIKRAEPR 321
Score = 150 (57.9 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 95 RDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 153
++E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 154 EFNDYDVVDKIVLSKITLLLDRRV 177
F VD++V K +LD +V
Sbjct: 206 SFEKPSSVDEVV--KTQHILDGKV 227
>UNIPROTKB|F1LZL9 [details] [associations]
symbol:F1LZL9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 EMBL:AC109707 IPI:IPI00780768
Ensembl:ENSRNOT00000045359 Uniprot:F1LZL9
Length = 247
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 72/152 (47%), Positives = 102/152 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TT ++ ++ FEQ G + D VV +DP TKRSRGFGF+TY+ + VD AM+
Sbjct: 1 KLFIGGLSFETTYKNRRSHFEQRGTLTDCVVRRDPNTKRSRGFGFVTYATVEEVDAAMNA 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
RPH +D RVVE RAV R++ +P FV G+K D EE L+ + Q+G IE +
Sbjct: 61 RPHKVDARVVEPNRAVSREDSQRPG--------FVCGIKEDTEEHHLQNNYEQYGQIEVI 112
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
++T++ G KR FAF+ F+D+D+ D+IVL K
Sbjct: 113 EIMTDRGLGKKRDFAFVTFHDHDL-DEIVLQK 143
Score = 109 (43.4 bits), Expect = 0.00018, P = 0.00018
Identities = 27/101 (26%), Positives = 52/101 (51%)
Query: 2 KPRYDDSKCTEP-------ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPIT 54
+P D++ EP +S R F+ G+ T + LQ +EQ+G+I + +M D
Sbjct: 61 RPHKVDARVVEPNRAVSREDSQRPGFVCGIKEDTEEHHLQNNYEQYGQIEVIEIMTDRGL 120
Query: 55 KRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
+ R F F+T+ + + D+ + + HN+ G E ++A+ +
Sbjct: 121 GKKRDFAFVTFHDHDL-DEIVLQKYHNVHGYNCEVRKALSK 160
>UNIPROTKB|F1P645 [details] [associations]
symbol:LOC607505 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
EMBL:AAEX03007023 Ensembl:ENSCAFT00000000618 OMA:EMARASP
Uniprot:F1P645
Length = 317
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 75/164 (45%), Positives = 106/164 (64%)
Query: 8 SKCTEPES--LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
SK PE LRK+FIGGL + TTDESL++ FE+WG + D VV ++P +RSRGFG +
Sbjct: 2 SKSESPEEPQLRKLFIGGLSFETTDESLRSHFERWGPLPDRVVRREPNAERSRGFGVVP- 60
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLR 124
+ V A + P + +RA R++ +P A+ TVKK+FVGG+K D EE LR
Sbjct: 61 RHLEEVAAARNPGPTRWTEESWK-QRAASREDSQRPGAHLTVKKIFVGGIKGDAEEHHLR 119
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ F Q G E + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 120 DDFEQDGKTEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 163
Score = 126 (49.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 23/86 (26%), Positives = 49/86 (56%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ + L+ FEQ G+ + +M D + + RGF F+T+ + VD
Sbjct: 100 TVKKIFVGGIKGDAEEHHLRDDFEQDGKTEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 159
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGK 100
+ + H ++G E ++A+ + E+ +
Sbjct: 160 VIQKYHTVNGHGCEVRKALSKQEMAR 185
>FB|FBgn0011666 [details] [associations]
symbol:msi "musashi" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IDA] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0003723 "RNA binding" evidence=ISM]
[GO:0003729 "mRNA binding" evidence=ISS;NAS;TAS] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0017148 "negative regulation of
translation" evidence=IMP;TAS] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0045182 "translation regulator
activity" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0042078 "germ-line stem cell division" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:AE014297 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071456 GO:GO:0022416
GO:GO:0001709 GO:GO:0019827 GO:GO:0000900 GO:GO:0042078 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 ChiTaRS:msi
FlyBase:FBgn0011666 EMBL:BT133366 RefSeq:NP_001247303.1
RefSeq:NP_733108.2 UniGene:Dm.1334 SMR:Q8IMS8 MINT:MINT-296706
STRING:Q8IMS8 EnsemblMetazoa:FBtr0084881 EnsemblMetazoa:FBtr0305218
EnsemblMetazoa:FBtr0333664 GeneID:43087 KEGG:dme:Dmel_CG5099
UCSC:CG5099-RB CTD:43087 InParanoid:Q8IMS8 OMA:PIKAFAC
GenomeRNAi:43087 NextBio:832139 Uniprot:Q8IMS8
Length = 634
Score = 341 (125.1 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 64/163 (39%), Positives = 109/163 (66%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT+ E V+ +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 78 RPHNIDGRVVETKRAVPRDEIGKP-EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIES 135
H +DG+ ++ K A P++ +P +AN T KK+FVGG+ +D ++++ YFSQFG +E
Sbjct: 264 PIHTLDGKKIDPKHATPKN---RPRQANKT-KKIFVGGVSQDTSAEEVKAYFSQFGPVEE 319
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
M+ +++T RGF F+ F + DVVD++ + +++VE
Sbjct: 320 TVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVE 362
Score = 182 (69.1 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T+ E ++A+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL 115
H I + VE K+A P++ + P A K++ +G L
Sbjct: 351 IHFHTIKNKKVECKKAQPKEAV-TPAAQLLQKRIMLGTL 388
>ZFIN|ZDB-GENE-040426-1268 [details] [associations]
symbol:msi2b "musashi homolog 2b (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-1268 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:BX000438
EMBL:BX510988 EMBL:BX649247 EMBL:CR848815 EMBL:BC055251
IPI:IPI00481779 RefSeq:NP_957403.1 UniGene:Dr.82489 SMR:Q7SXT6
STRING:Q7SXT6 Ensembl:ENSDART00000100194 GeneID:394084
KEGG:dre:394084 CTD:394084 InParanoid:Q7SXT6 OMA:NYISASP
NextBio:20815041 Uniprot:Q7SXT6
Length = 408
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 62/148 (41%), Positives = 100/148 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++A VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ +K T RGF F+ F + DVV+K+
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKV 167
Score = 174 (66.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
Score = 123 (48.4 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 109 KMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVL 79
>UNIPROTKB|O43347 [details] [associations]
symbol:MSI1 "RNA-binding protein Musashi homolog 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
"poly(U) RNA binding" evidence=IEA] [GO:0009725 "response to
hormone stimulus" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0007399 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
EMBL:AB012851 EMBL:AC003982 EMBL:AB072590 EMBL:AB072591
EMBL:AB072592 EMBL:AB073212 IPI:IPI00001007 RefSeq:NP_002433.1
UniGene:Hs.158311 ProteinModelPortal:O43347 SMR:O43347
IntAct:O43347 MINT:MINT-1432501 STRING:O43347 PhosphoSite:O43347
PaxDb:O43347 PRIDE:O43347 DNASU:4440 Ensembl:ENST00000257552
GeneID:4440 KEGG:hsa:4440 UCSC:uc001tye.1 CTD:4440
GeneCards:GC12M120779 HGNC:HGNC:7330 HPA:CAB022337 MIM:603328
neXtProt:NX_O43347 PharmGKB:PA31137 InParanoid:O43347 OMA:GLPGSHP
OrthoDB:EOG48GW3J GenomeRNAi:4440 NextBio:17313 ArrayExpress:O43347
Bgee:O43347 CleanEx:HS_MSI1 Genevestigator:O43347
GermOnline:ENSG00000135097 Uniprot:O43347
Length = 362
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 61/153 (39%), Positives = 98/153 (64%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 133
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ ++ +K T RGF F+ F D+V+K+
Sbjct: 134 KVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 182 (69.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 127 (49.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 94 PRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 152
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 153 IEFNDYDVVDKIV 165
+ F D VDK++
Sbjct: 66 VTFMDQAGVDKVL 78
>UNIPROTKB|F1MS42 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:DAAA02045450 EMBL:DAAA02045451 IPI:IPI00718423
Ensembl:ENSBTAT00000012926 Uniprot:F1MS42
Length = 342
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 60/148 (40%), Positives = 97/148 (65%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD ++
Sbjct: 1 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 61 SRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDA 118
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ +K T RGF F+ F D+V+K+
Sbjct: 119 MLMFDKTTNRHRGFGFVTFESEDIVEKV 146
Score = 182 (69.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 89 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 148
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 149 IHFHEINNKMVECKKAQPK-EVMSPTGSA 176
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 109 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F+ F D VDK++
Sbjct: 1 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL 58
>UNIPROTKB|A5D9H5 [details] [associations]
symbol:HNRPD "Heterogeneous nuclear ribonucleoprotein D"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 InterPro:IPR012956
Pfam:PF08143 EMBL:DAAA02018245 EMBL:BT030594 IPI:IPI00905408
RefSeq:NP_001091533.1 UniGene:Bt.52882 SMR:A5D9H5 STRING:A5D9H5
Ensembl:ENSBTAT00000056365 GeneID:527471 KEGG:bta:527471
NextBio:20874604 Uniprot:A5D9H5
Length = 306
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 68/167 (40%), Positives = 105/167 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 136 (52.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKEQ 262
>UNIPROTKB|A6H6Y0 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0042162 "telomeric DNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0030529 GO:GO:0043488 GO:GO:0042162 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 OrthoDB:EOG49W2FZ
OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:DAAA02018245
UniGene:Bt.52882 EMBL:BC146038 IPI:IPI00696935 SMR:A6H6Y0
STRING:A6H6Y0 Ensembl:ENSBTAT00000018540 InParanoid:A6H6Y0
Uniprot:A6H6Y0
Length = 355
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 68/167 (40%), Positives = 105/167 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 136 (52.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKEQ 262
>UNIPROTKB|E2RIX2 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 OMA:PNQNWNQ
InterPro:IPR012956 Pfam:PF08143 EMBL:AAEX03016719
RefSeq:XP_857957.1 Ensembl:ENSCAFT00000038801 GeneID:478450
KEGG:cfa:478450 Uniprot:E2RIX2
Length = 355
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 68/167 (40%), Positives = 105/167 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 136 (52.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKEQ 262
>UNIPROTKB|H0Y8G5 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
ChiTaRS:HNRNPD Ensembl:ENST00000509263 Bgee:H0Y8G5 Uniprot:H0Y8G5
Length = 261
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 68/167 (40%), Positives = 105/167 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 17 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 75
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 76 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 129
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 130 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 176
Score = 136 (52.9 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 112 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 171
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 172 IMEKKYHNVGLSKCEIKVAMSKEQ 195
>UNIPROTKB|Q14103 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0042162 "telomeric DNA binding" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0006396
"RNA processing" evidence=TAS] [GO:0006401 "RNA catabolic process"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AF026126
GO:GO:0005829 GO:GO:0045893 GO:GO:0005654 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
GO:GO:0006401 GO:GO:0048255 GO:GO:0030529 EMBL:CH471057
GO:GO:0000398 GO:GO:0042162 eggNOG:COG0724 HOVERGEN:HBG002295
KO:K13044 EMBL:AC124016 OrthoDB:EOG49W2FZ EMBL:D55671 EMBL:D55672
EMBL:D55673 EMBL:D55674 EMBL:AK292707 EMBL:BC002401 EMBL:BC023977
EMBL:BC026015 EMBL:X03910 EMBL:AF039575 EMBL:M94630 IPI:IPI00028888
IPI:IPI00220683 IPI:IPI00220684 IPI:IPI00220685 PIR:A24016
PIR:A44192 PIR:B48138 RefSeq:NP_001003810.1 RefSeq:NP_002129.2
RefSeq:NP_112737.1 RefSeq:NP_112738.1 UniGene:Hs.480073 PDB:1HD0
PDB:1HD1 PDB:1IQT PDB:1WTB PDB:1X0F PDB:2Z5N PDBsum:1HD0
PDBsum:1HD1 PDBsum:1IQT PDBsum:1WTB PDBsum:1X0F PDBsum:2Z5N
ProteinModelPortal:Q14103 SMR:Q14103 IntAct:Q14103
MINT:MINT-5001251 STRING:Q14103 PhosphoSite:Q14103 DMDM:13124489
SWISS-2DPAGE:Q14103 PaxDb:Q14103 PRIDE:Q14103 DNASU:3184
Ensembl:ENST00000313899 Ensembl:ENST00000352301
Ensembl:ENST00000353341 GeneID:3184 KEGG:hsa:3184 UCSC:uc003hmm.1
UCSC:uc003hmn.1 UCSC:uc003hmo.1 UCSC:uc003hmp.1 CTD:3184
GeneCards:GC04M083274 HGNC:HGNC:5036 HPA:HPA004911 MIM:601324
neXtProt:NX_Q14103 PharmGKB:PA29361 InParanoid:Q14103 OMA:PNQNWNQ
PhylomeDB:Q14103 ChiTaRS:HNRNPD EvolutionaryTrace:Q14103
GenomeRNAi:3184 NextBio:12644 PMAP-CutDB:Q14103 ArrayExpress:Q14103
Bgee:Q14103 Genevestigator:Q14103 GermOnline:ENSG00000138668
InterPro:IPR012956 Pfam:PF08143 Uniprot:Q14103
Length = 355
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 68/167 (40%), Positives = 105/167 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 136 (52.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKEQ 262
>MGI|MGI:101947 [details] [associations]
symbol:Hnrnpd "heterogeneous nuclear ribonucleoprotein D"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0042162
"telomeric DNA binding" evidence=ISO] [GO:0043488 "regulation of
mRNA stability" evidence=IMP] [GO:0048255 "mRNA stabilization"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:101947 GO:GO:0005829
GO:GO:0005634 GO:GO:0006355 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 GO:GO:0048255 GO:GO:0030529
GO:GO:0043488 GO:GO:0042162 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ ChiTaRS:HNRNPD
InterPro:IPR012956 Pfam:PF08143 EMBL:U11273 EMBL:U11274
EMBL:BC011172 EMBL:BC049098 IPI:IPI00230086 IPI:IPI00330958
IPI:IPI00336873 IPI:IPI00336874 PIR:I49069 PIR:I49070
RefSeq:NP_001070733.1 RefSeq:NP_001070734.1 RefSeq:NP_001070735.1
RefSeq:NP_031542.2 UniGene:Mm.150231 ProteinModelPortal:Q60668
SMR:Q60668 DIP:DIP-31411N IntAct:Q60668 STRING:Q60668
PhosphoSite:Q60668 PaxDb:Q60668 PRIDE:Q60668
Ensembl:ENSMUST00000019128 Ensembl:ENSMUST00000172361 GeneID:11991
KEGG:mmu:11991 UCSC:uc008ygt.1 UCSC:uc008ygu.1 InParanoid:Q60668
NextBio:280159 Bgee:Q60668 Genevestigator:Q60668
GermOnline:ENSMUSG00000000568 Uniprot:Q60668
Length = 355
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 68/167 (40%), Positives = 105/167 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHTEAAAAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 197 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 136 (52.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKEQ 262
>MGI|MGI:107376 [details] [associations]
symbol:Msi1 "musashi RNA-binding protein 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009725
"response to hormone stimulus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:107376 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0009725 GO:GO:0005844
GO:GO:0030855 eggNOG:COG0724 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 CTD:4440 OMA:GLPGSHP OrthoDB:EOG48GW3J
EMBL:D49654 EMBL:AK084019 IPI:IPI00121300 IPI:IPI00462260
RefSeq:NP_032655.1 UniGene:Mm.5077 PDB:1UAW PDB:2MSS PDB:2MST
PDB:2RS2 PDBsum:1UAW PDBsum:2MSS PDBsum:2MST PDBsum:2RS2
ProteinModelPortal:Q61474 SMR:Q61474 STRING:Q61474
PhosphoSite:Q61474 PaxDb:Q61474 PRIDE:Q61474 DNASU:17690
Ensembl:ENSMUST00000150779 GeneID:17690 KEGG:mmu:17690
UCSC:uc008zdu.1 UCSC:uc008zdv.1 InParanoid:Q61474 ChiTaRS:MSI1
EvolutionaryTrace:Q61474 NextBio:292270 Bgee:Q61474 CleanEx:MM_MSI1
Genevestigator:Q61474 GermOnline:ENSMUSG00000054256 Uniprot:Q61474
Length = 362
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 61/153 (39%), Positives = 97/153 (63%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
++ H +D + ++ K A PR +P+ KK+FVGGL + +D++ YF QFG
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFG 133
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ ++ +K T RGF F+ F D+V+K+
Sbjct: 134 KVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 181 (68.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 127 (49.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 94 PRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 152
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 153 IEFNDYDVVDKIV 165
+ F D VDK++
Sbjct: 66 VTFMDQAGVDKVL 78
>RGD|628778 [details] [associations]
symbol:Msi1 "musashi RNA-binding protein 1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=NAS] [GO:0003727 "single-stranded RNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005844 "polysome"
evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
evidence=IEA;ISO] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0030855 "epithelial cell differentiation"
evidence=IEP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
Genevestigator:Q8K3P4 Uniprot:Q8K3P4
Length = 362
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 61/153 (39%), Positives = 97/153 (63%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
++ H +D + ++ K A PR +P+ KK+FVGGL + +D++ YF QFG
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFG 133
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ ++ +K T RGF F+ F D+V+K+
Sbjct: 134 KVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 181 (68.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 127 (49.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 94 PRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 152
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 153 IEFNDYDVVDKIV 165
+ F D VDK++
Sbjct: 66 VTFMDQAGVDKVL 78
>UNIPROTKB|Q8K3P4 [details] [associations]
symbol:Msi1 "RNA-binding protein Musashi homolog 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
Genevestigator:Q8K3P4 Uniprot:Q8K3P4
Length = 362
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 61/153 (39%), Positives = 97/153 (63%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
++ H +D + ++ K A PR +P+ KK+FVGGL + +D++ YF QFG
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFG 133
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ ++ +K T RGF F+ F D+V+K+
Sbjct: 134 KVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 181 (68.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 127 (49.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 94 PRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 152
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 153 IEFNDYDVVDKIV 165
+ F D VDK++
Sbjct: 66 VTFMDQAGVDKVL 78
>UNIPROTKB|B4DTC3 [details] [associations]
symbol:HNRNPD "cDNA FLJ54150, highly similar to
Heterogeneous nuclear ribonucleoprotein D0" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 HOGENOM:HOG000234441 HOVERGEN:HBG002295 EMBL:AC124016
UniGene:Hs.480073 HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956
Pfam:PF08143 EMBL:AK300149 IPI:IPI01014602 SMR:B4DTC3 STRING:B4DTC3
Ensembl:ENST00000543098 Uniprot:B4DTC3
Length = 303
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 70/166 (42%), Positives = 104/166 (62%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 34 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 91
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 92 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEEK 145
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 146 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 191
Score = 136 (52.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 127 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 186
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 187 IMEKKYHNVGLSKCEIKVAMSKEQ 210
>UNIPROTKB|F8VTQ5 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022641
ProteinModelPortal:F8VTQ5 SMR:F8VTQ5 PRIDE:F8VTQ5
Ensembl:ENST00000551702 ArrayExpress:F8VTQ5 Bgee:F8VTQ5
Uniprot:F8VTQ5
Length = 145
Score = 208 (78.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 39/70 (55%), Positives = 55/70 (78%)
Query: 100 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 48 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 107
Query: 159 DVVDKIVLSK 168
D VDKIV+ K
Sbjct: 108 DSVDKIVIQK 117
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 25/90 (27%), Positives = 54/90 (60%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 54 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 113
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 114 VIQKYHTVNGHNCEVRKALSKQEMASASSS 143
Score = 136 (52.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 25/41 (60%), Positives = 31/41 (75%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDP 52
EPE LRK+FIGGL + TTDESL++ FEQWG + D V + P
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVDSQRP 49
>UNIPROTKB|Q96DH6 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
"poly(U) RNA binding" evidence=IEA] [GO:0048864 "stem cell
development" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 KO:K14411 OrthoDB:EOG48GW3J EMBL:BC001526
EMBL:BC017560 EMBL:AK093888 IPI:IPI00073713 IPI:IPI00167806
IPI:IPI00455161 RefSeq:NP_620412.1 RefSeq:NP_733839.1
UniGene:Hs.658922 ProteinModelPortal:Q96DH6 SMR:Q96DH6
IntAct:Q96DH6 STRING:Q96DH6 PhosphoSite:Q96DH6 DMDM:51316513
PaxDb:Q96DH6 PRIDE:Q96DH6 DNASU:124540 Ensembl:ENST00000284073
Ensembl:ENST00000322684 Ensembl:ENST00000579180 GeneID:124540
KEGG:hsa:124540 UCSC:uc002iuz.1 UCSC:uc002iva.3 CTD:124540
GeneCards:GC17P055334 HGNC:HGNC:18585 HPA:CAB022300 MIM:607897
neXtProt:NX_Q96DH6 PharmGKB:PA38590 InParanoid:Q96DH6 OMA:ISDCTIM
PhylomeDB:Q96DH6 ChiTaRS:MSI2 GenomeRNAi:124540 NextBio:81316
ArrayExpress:Q96DH6 Bgee:Q96DH6 CleanEx:HS_MSI2
Genevestigator:Q96DH6 GermOnline:ENSG00000153944 Uniprot:Q96DH6
Length = 328
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 61/148 (41%), Positives = 98/148 (66%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ +K T RGF F+ F + DVV+K+
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKV 167
Score = 174 (66.3 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
Score = 122 (48.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 109 KMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79
>MGI|MGI:1923876 [details] [associations]
symbol:Msi2 "musashi RNA-binding protein 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844
"polysome" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
evidence=IDA] [GO:0048864 "stem cell development" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1923876 GO:GO:0005737 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 GO:GO:0048864 CTD:124540 ChiTaRS:MSI2
EMBL:AB056102 EMBL:AB056103 EMBL:BK001483 EMBL:AK049637
EMBL:AK049688 EMBL:AK051269 IPI:IPI00120924 IPI:IPI00462899
IPI:IPI00462900 RefSeq:NP_473384.1 UniGene:Mm.400451
UniGene:Mm.428433 UniGene:Mm.474737 ProteinModelPortal:Q920Q6
SMR:Q920Q6 STRING:Q920Q6 PhosphoSite:Q920Q6 PaxDb:Q920Q6
PRIDE:Q920Q6 Ensembl:ENSMUST00000092794 Ensembl:ENSMUST00000107909
GeneID:76626 KEGG:mmu:76626 UCSC:uc007kvn.2 InParanoid:Q920Q6
OMA:ENYISAA NextBio:345476 Bgee:Q920Q6 CleanEx:MM_MSI2
Genevestigator:Q920Q6 GermOnline:ENSMUSG00000069769 Uniprot:Q920Q6
Length = 346
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 61/148 (41%), Positives = 98/148 (66%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ +K T RGF F+ F + DVV+K+
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDVVEKV 167
Score = 174 (66.3 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPP 194
Score = 122 (48.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 109 KMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79
>ZFIN|ZDB-GENE-050320-86 [details] [associations]
symbol:msi1 "musashi homolog 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0007417 "central
nervous system development" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050320-86 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007417 GO:GO:0003676 EMBL:AB698464 Uniprot:J4C3V8
Length = 349
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 62/158 (39%), Positives = 100/158 (63%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
S P K+FIGGL ++TT E L+ +F ++GE+ + +VM+DP+TKRSRGFGF+T+ +
Sbjct: 11 SSSDSPHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVD 70
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREY 126
VD ++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++Y
Sbjct: 71 QAGVDKVLAQTRHELDSKTIDPKVAFPRR--AQPKLVTRTKKIFVGGLSVNTTIEDVKQY 128
Query: 127 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
F QFG ++ ++ +K T RGF F+ F + DVV+K+
Sbjct: 129 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 166
Score = 176 (67.0 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 32/89 (35%), Positives = 56/89 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +F+Q+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P ++
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSS 196
Score = 109 (43.4 bits), Expect = 0.00038, P = 0.00038
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 109 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
KMF+GGL Q ++ L++YF +FG ++ ++ + T RGF F+ F D VDK++
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVL 78
>UNIPROTKB|G3N220 [details] [associations]
symbol:G3N220 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00700000104376 EMBL:DAAA02027300
Ensembl:ENSBTAT00000063435 OMA:GWEDRSH Uniprot:G3N220
Length = 310
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 67/121 (55%), Positives = 90/121 (74%)
Query: 49 MKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVK 108
M+DP TKRSRGFGF+TYS + VD AM RPH RVVE KRAV R++ KP A+ TVK
Sbjct: 1 MRDPKTKRSRGFGFVTYSCVEEVDAAMYARPHK---RVVEPKRAVSREDSVKPGAHLTVK 57
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+FVGG+K D EE +LR+ F +G IE++ ++ ++++G KRG AF+ F+D+D VDKIV+
Sbjct: 58 KIFVGGIKEDTEEYNLRDCFENYGKIETIEVMEDRQSGKKRGCAFVTFDDHDTVDKIVVQ 117
Query: 168 K 168
K
Sbjct: 118 K 118
Score = 140 (54.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 29/95 (30%), Positives = 54/95 (56%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D K +++K+F+GG+ T + +L+ FE +G+I + VM+D + + RG F+
Sbjct: 44 REDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDCFENYGKIETIEVMEDRQSGKKRGCAFV 103
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
T+ + VD + + H I+G E K+A+ + E+
Sbjct: 104 TFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEM 138
>RGD|620365 [details] [associations]
symbol:Hnrpd "heterogeneous nuclear ribonucleoprotein D"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000291 "nuclear-transcribed mRNA catabolic
process, exonucleolytic" evidence=TAS] [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0003729 "mRNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO;ISS] [GO:0042162 "telomeric DNA binding"
evidence=IEA;ISO;ISS] [GO:0043488 "regulation of mRNA stability"
evidence=IEA;ISO] [GO:0048255 "mRNA stabilization" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:620365 GO:GO:0005829 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0006913 GO:GO:0048255 GO:GO:0030529
GO:GO:0042162 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044
OrthoDB:EOG49W2FZ GermOnline:ENSRNOG00000002292 InterPro:IPR012956
Pfam:PF08143 EMBL:AB046615 EMBL:AB046616 EMBL:AB046617
EMBL:AB046618 IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384
IPI:IPI00231385 RefSeq:NP_001076008.1 RefSeq:NP_001076009.1
RefSeq:NP_001076010.1 RefSeq:NP_077380.2 UniGene:Rn.94022
ProteinModelPortal:Q9JJ54 SMR:Q9JJ54 STRING:Q9JJ54
PhosphoSite:Q9JJ54 PRIDE:Q9JJ54 GeneID:79256 KEGG:rno:79256
UCSC:RGD:620365 CTD:79256 InParanoid:Q9JJ54 NextBio:614748
ArrayExpress:Q9JJ54 Genevestigator:Q9JJ54 GO:GO:0000291
Uniprot:Q9JJ54
Length = 353
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 67/167 (40%), Positives = 105/167 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF
Sbjct: 82 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 141 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 194
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 195 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 241
Score = 136 (52.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 177 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 237 IMEKKYHNVGLSKCEIKVAMSKEQ 260
>UNIPROTKB|G3V6A4 [details] [associations]
symbol:Hnrpd "Protein Hnrpd" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:620365 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 RefSeq:NP_001076009.1
UniGene:Rn.94022 GeneID:79256 KEGG:rno:79256 CTD:79256
NextBio:614748 EMBL:CH474022 Ensembl:ENSRNOT00000003158
Uniprot:G3V6A4
Length = 304
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 67/167 (40%), Positives = 105/167 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF
Sbjct: 82 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 141 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 194
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 195 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 241
Score = 136 (52.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 177 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 237 IMEKKYHNVGLSKCEIKVAMSKEQ 260
>UNIPROTKB|G3V6A5 [details] [associations]
symbol:Hnrpd "Heterogeneous nuclear ribonucleoprotein D,
isoform CRA_c" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 RefSeq:NP_001076008.1 UniGene:Rn.94022 GeneID:79256
KEGG:rno:79256 CTD:79256 NextBio:614748 EMBL:CH474022
Ensembl:ENSRNOT00000003173 Uniprot:G3V6A5
Length = 334
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 69/166 (41%), Positives = 104/166 (62%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF+
Sbjct: 65 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFV 122
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 123 LFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEEK 176
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 177 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 222
Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 158 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 218 IMEKKYHNVGLSKCEIKVAMSKEQ 241
>UNIPROTKB|Q9JJ54 [details] [associations]
symbol:Hnrnpd "Heterogeneous nuclear ribonucleoprotein D0"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0005829
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0006913 GO:GO:0048255 GO:GO:0030529 GO:GO:0042162
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044 OrthoDB:EOG49W2FZ
GermOnline:ENSRNOG00000002292 InterPro:IPR012956 Pfam:PF08143
EMBL:AB046615 EMBL:AB046616 EMBL:AB046617 EMBL:AB046618
IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384 IPI:IPI00231385
RefSeq:NP_001076008.1 RefSeq:NP_001076009.1 RefSeq:NP_001076010.1
RefSeq:NP_077380.2 UniGene:Rn.94022 ProteinModelPortal:Q9JJ54
SMR:Q9JJ54 STRING:Q9JJ54 PhosphoSite:Q9JJ54 PRIDE:Q9JJ54
GeneID:79256 KEGG:rno:79256 UCSC:RGD:620365 CTD:79256
InParanoid:Q9JJ54 NextBio:614748 ArrayExpress:Q9JJ54
Genevestigator:Q9JJ54 GO:GO:0000291 Uniprot:Q9JJ54
Length = 353
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 67/167 (40%), Positives = 105/167 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++G++VD + DPIT RSRGFGF
Sbjct: 82 PRHTEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 141 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 194
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF FG +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 195 KIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 241
Score = 136 (52.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 177 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 237 IMEKKYHNVGLSKCEIKVAMSKEQ 260
>UNIPROTKB|F1M6M1 [details] [associations]
symbol:F1M6M1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 IPI:IPI00563231
Ensembl:ENSRNOT00000040517 Uniprot:F1M6M1
Length = 253
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 62/116 (53%), Positives = 86/116 (74%)
Query: 54 TKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVG 113
TKRSRGFGF+T + + VD M+ RPH +DGRVVE KRA+ R++ +P+A+ TVKK+FVG
Sbjct: 1 TKRSRGFGFVTCTSVEKVDATMNARPHKVDGRVVEPKRAMSREDSQRPDAHLTVKKIFVG 60
Query: 114 GLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+K D EE LR+YF Q+G IE + ++ ++ + KRGFAF+ F+D+D VDKIV K
Sbjct: 61 SIKEDTEEHHLRDYFEQYGKIELIEIMADRGSEKKRGFAFVTFDDHDSVDKIVTQK 116
Score = 134 (52.2 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 25/95 (26%), Positives = 57/95 (60%)
Query: 6 DDSKCTEPE-SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFIT 64
+DS+ + +++K+F+G + T + L+ +FEQ+G+I + +M D +++ RGF F+T
Sbjct: 43 EDSQRPDAHLTVKKIFVGSIKEDTEEHHLRDYFEQYGKIELIEIMADRGSEKKRGFAFVT 102
Query: 65 YSEAKMVDDAMSNRPHNIDGR-VVETKRAVPRDEI 98
+ + VD ++ + H ++G E ++ + + E+
Sbjct: 103 FDDHDSVDKIVTQKYHTVNGHHKCEVRKPLSKQEM 137
>CGD|CAL0003460 [details] [associations]
symbol:orf19.5989 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0005849 "mRNA
cleavage factor complex" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
CGD:CAL0003460 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG0724 KO:K14411
RefSeq:XP_723052.1 RefSeq:XP_723199.1 ProteinModelPortal:Q5ANB5
SMR:Q5ANB5 STRING:Q5ANB5 GeneID:3635162 GeneID:3635323
KEGG:cal:CaO19.13410 KEGG:cal:CaO19.5989 Uniprot:Q5ANB5
Length = 475
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 66/163 (40%), Positives = 105/163 (64%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK FIGGL + TT+E+L + F+++G IVD +MKD T RSRGFGF+T+ +AK VD +
Sbjct: 162 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 221
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 135
+R H +DG++++ KRA+ +++ K V K+FVGG+ E++ +FSQFG I
Sbjct: 222 DR-HVLDGKLIDPKRAISKEDQEK------VGKIFVGGIDPMVTEEEFDNFFSQFGKIID 274
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ ++ VDK+ ++K L + +E
Sbjct: 275 CQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAME 317
Score = 192 (72.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 39/95 (41%), Positives = 56/95 (58%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
P+ SK + E + K+F+GG+D T+E FF Q+G+I+D +M D T RSRGFGF
Sbjct: 233 PKRAISK-EDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGF 291
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
+TY VD N+ + G+ +E KRA PR +
Sbjct: 292 VTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPRGQ 326
Score = 108 (43.1 bits), Expect = 0.00081, P = 0.00081
Identities = 31/102 (30%), Positives = 46/102 (45%)
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATV--------KKMFVGGLK-DQEEDDLREYFSQ 129
P N + + VP P ANAT +K F+GGL D E+ L +F +
Sbjct: 125 PGNANQQNFGAAGGVPPPPPPAPTANATSAESAGGPSRKCFIGGLSWDTTEEALVSHFQK 184
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
+G I ++ + TG RGF F+ F D VD ++ + L
Sbjct: 185 YGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLKDRHVL 226
>UNIPROTKB|F1M5K3 [details] [associations]
symbol:F1M5K3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 IPI:IPI00567346
Ensembl:ENSRNOT00000044298 Uniprot:F1M5K3
Length = 327
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 72/157 (45%), Positives = 103/157 (65%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
+PE LRK+FI G + TT+ESL++ FE+WG D V M+D TKR R FGF+ Y+ + V
Sbjct: 29 DPEELRKLFIRG-SFETTNESLRSHFEEWGTFTDCV-MRDLNTKRFRDFGFVIYATVEEV 86
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RP +DGR+VE K A+ R++ +P A+ T KK+FVGG+K ED
Sbjct: 87 DAAMNARPRKVDGRLVEPKSAMSREKSQRPGAHLTAKKIFVGGIK---EDT--------- 134
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
E +++T++ +G KR FAF+ F+D+D VDKIV+ K
Sbjct: 135 --EKHHIMTDRGSGRKRDFAFVAFDDHDSVDKIVIQK 169
>ZFIN|ZDB-GENE-030826-25 [details] [associations]
symbol:msi2a "musashi homolog 2a (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030826-25 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 OrthoDB:EOG48GW3J HSSP:Q61474
EMBL:CR931799 EMBL:CR931806 EMBL:BC045335 IPI:IPI00489753
RefSeq:NP_997961.1 UniGene:Dr.32677 SMR:Q7ZW10
Ensembl:ENSDART00000099473 Ensembl:ENSDART00000132096
GeneID:100002680 KEGG:dre:100002680 CTD:100002680 InParanoid:Q7ZW10
OMA:MEADASQ NextBio:20785547 Uniprot:Q7ZW10
Length = 388
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 61/148 (41%), Positives = 98/148 (66%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGFIT+++ VD ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQ 81
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESV 136
H +D + ++ K A PR +P+ KK+FVGGL +D+++YF QFG +E
Sbjct: 82 PHHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSASTVVEDVKQYFEQFGKVEDA 139
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ +K T RGF F+ F + D+V+K+
Sbjct: 140 MLMFDKTTNRHRGFGFVTFENEDIVEKV 167
Score = 174 (66.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 110 KKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCE 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKM 110
H I+ ++VE K+A P++ + P + +
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARSL 203
Score = 122 (48.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 109 KMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
KMF+GGL Q D LR+YF +FG I ++ + T RGF FI F D VDK++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVL 79
>UNIPROTKB|E2R6E4 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
RefSeq:XP_003432858.1 Ensembl:ENSCAFT00000031038 GeneID:100683271
KEGG:cfa:100683271 Uniprot:E2R6E4
Length = 407
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 68/178 (38%), Positives = 105/178 (58%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 74 AMSNRPHNIDGRVVETKRAVPRD---EIGKPEA---------NATVKKMFVGGLKDQ-EE 120
+++RPH +DGR ++ K PR E +P+ N+ K+FVGG+ E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 182 (69.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 37/94 (39%), Positives = 60/94 (63%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 192
>UNIPROTKB|Q96EP5 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0003723 eggNOG:COG0724 EMBL:AF181719 EMBL:BC012062
EMBL:AK056850 IPI:IPI00165230 IPI:IPI00335930 RefSeq:NP_061832.2
RefSeq:NP_733829.1 UniGene:Hs.222510 PDB:2DGS PDB:2DH8 PDBsum:2DGS
PDBsum:2DH8 ProteinModelPortal:Q96EP5 SMR:Q96EP5 IntAct:Q96EP5
STRING:Q96EP5 PhosphoSite:Q96EP5 DMDM:44887869
REPRODUCTION-2DPAGE:IPI00165230 PaxDb:Q96EP5 PRIDE:Q96EP5
DNASU:26528 Ensembl:ENST00000233078 Ensembl:ENST00000336761
GeneID:26528 KEGG:hsa:26528 UCSC:uc002lsm.3 UCSC:uc002lsn.3
CTD:26528 GeneCards:GC19P001407 HGNC:HGNC:2683 HPA:HPA004201
HPA:HPA004631 MIM:607430 neXtProt:NX_Q96EP5 PharmGKB:PA27153
HOGENOM:HOG000234441 HOVERGEN:HBG002295 InParanoid:Q96EP5 KO:K14411
OMA:HNLDGRN OrthoDB:EOG40ZQXT PhylomeDB:Q96EP5 ChiTaRS:DAZAP1
EvolutionaryTrace:Q96EP5 GenomeRNAi:26528 NextBio:48864
ArrayExpress:Q96EP5 Bgee:Q96EP5 CleanEx:HS_DAZAP1
Genevestigator:Q96EP5 GermOnline:ENSG00000071626 Uniprot:Q96EP5
Length = 407
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 68/178 (38%), Positives = 105/178 (58%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 74 AMSNRPHNIDGRVVETKRAVPRD---EIGKPEA---------NATVKKMFVGGLKDQ-EE 120
+++RPH +DGR ++ K PR E +P+ N+ K+FVGG+ E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 182 (69.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 37/94 (39%), Positives = 60/94 (63%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 192
>UNIPROTKB|I3LB68 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:FP325262 RefSeq:NP_001231435.1
UniGene:Ssc.1299 Ensembl:ENSSSCT00000023438 GeneID:100625005
KEGG:ssc:100625005 Uniprot:I3LB68
Length = 406
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 68/178 (38%), Positives = 105/178 (58%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 74 AMSNRPHNIDGRVVETKRAVPRD---EIGKPEA---------NATVKKMFVGGLKDQ-EE 120
+++RPH +DGR ++ K PR E +P+ N+ K+FVGG+ E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 182 (69.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 37/94 (39%), Positives = 60/94 (63%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 192
>UNIPROTKB|F1SA31 [details] [associations]
symbol:F1SA31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:CU856608
Ensembl:ENSSSCT00000014866 Uniprot:F1SA31
Length = 332
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 65/161 (40%), Positives = 108/161 (67%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + K+FIGGL +TT + L +++QWG++ D VV++DP +++SR F + + V
Sbjct: 11 ELKKKEKLFIGGLSSQTTGKGLN-YYKQWGKL-DCVVIRDPTSQKSR-FILLHFHPWLRV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQF 130
D A + P +IDG++V K AVPR++ GKP TVKK+F+GGL +D EE LR+YF ++
Sbjct: 68 DAARAATPRSIDGKMVAPKHAVPREDYGKPGPLVTVKKLFIGGLTEDTEEHHLRDYFEKY 127
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITL 171
I+++ ++T++++ RGF F+ F+D+D VDK++ T+
Sbjct: 128 EKIDAIEIITDRQSSKIRGFGFVTFDDHDHVDKLLQKNHTV 168
Score = 139 (54.0 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D K +++K+FIGGL T + L+ +FE++ +I + ++ D + + RGFGF
Sbjct: 90 PREDYGKPGPLVTVKKLFIGGLTEDTEEHHLRDYFEKYEKIDAIEIITDRQSSKIRGFGF 149
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+T+ + VD + H ++G E ++A+ + +I
Sbjct: 150 VTFDDHDHVDKLLQKN-HTVNGHHAEVRKALSQSKI 184
>ASPGD|ASPL0000063757 [details] [associations]
symbol:AN10941 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 EMBL:BN001304 ProteinModelPortal:C8VBB9
EnsemblFungi:CADANIAT00000536 HOGENOM:HOG000162494 OMA:MNPAMMQ
Uniprot:C8VBB9
Length = 559
Score = 330 (121.2 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 65/162 (40%), Positives = 104/162 (64%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL++ TTD+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV- 169
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESV 136
+ H +DG++++ KRA+PRDE K K+FVGG+ + E D +++F QFG +
Sbjct: 170 KEHYLDGKIIDPKRAIPRDEQEK------TSKIFVGGVSQEATEQDFKQFFMQFGRVIDA 223
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++ +K+TG RGF F+ F D + + LS+ +L + +E
Sbjct: 224 TLMIDKDTGRPRGFGFVTF-DSEAAVEAALSRPLEILGKTIE 264
Score = 180 (68.4 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E K+F+GG+ T++ + FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 189 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 248
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ A+S RP I G+ +E K+A PR +
Sbjct: 249 EAALS-RPLEILGKTIEVKKAQPRGNL 274
>UNIPROTKB|E2RK48 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
GeneTree:ENSGT00700000104255 CTD:4440 EMBL:AAEX03014735
RefSeq:XP_854252.2 Ensembl:ENSCAFT00000016345 GeneID:611488
KEGG:cfa:611488 Uniprot:E2RK48
Length = 362
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 60/153 (39%), Positives = 97/153 (63%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P K+FIGGL ++TT E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
++ H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QF
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFE 133
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ ++ +K T RGF F+ F D+V+K+
Sbjct: 134 KVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 174 (66.3 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+ ++ D ++M D T R RGFGF+T+ +V+
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 169 IHFHEINNKMVECKKAQPK-EVMSPTGSA 196
Score = 127 (49.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 94 PRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 152
P+ + P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F
Sbjct: 6 PQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 153 IEFNDYDVVDKIV 165
+ F D VDK++
Sbjct: 66 VTFMDQAGVDKVL 78
>UNIPROTKB|E1BAK6 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
EMBL:DAAA02020260 IPI:IPI00701555 Ensembl:ENSBTAT00000026274
Uniprot:E1BAK6
Length = 396
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 68/174 (39%), Positives = 103/174 (59%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 RPHNIDGRVVETKRAVPRD---EIGKPEA---------NATVKKMFVGGLKDQ-EEDDLR 124
RPH +DGR ++ K PR E +P+ N+ K+FVGG+ E +LR
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 120
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 174
Score = 182 (69.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 37/94 (39%), Positives = 60/94 (63%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 95 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 148
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 149 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 182
>UNIPROTKB|F1NCW4 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
GeneTree:ENSGT00700000104347 OMA:PNQNWNQ EMBL:AADN02009040
IPI:IPI00819680 Ensembl:ENSGALT00000038011 ArrayExpress:F1NCW4
Uniprot:F1NCW4
Length = 258
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 65/152 (42%), Positives = 98/152 (64%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+ + E++ VD M
Sbjct: 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H ++G+V++ KRA + +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 61 KEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEEKIREYFGAFGEVESI 114
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI F + + V KI+ K
Sbjct: 115 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 146
Score = 140 (54.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 37/149 (24%), Positives = 73/149 (48%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 82 EPVKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 141
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ---EEDDLREYFSQF 130
M + HN+ E K A+ +++ + + + + FVG + + + + +S +
Sbjct: 142 IMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGS-RGGFVGRARGRGGGPSQNWNQGYSNY 200
Query: 131 GTIESVNMVTNKET-GAKRGFAFIEFNDY 158
N N + G G+ + +N+Y
Sbjct: 201 WNQGYGNYGYNSQGYGGYGGYDYTGYNNY 229
>RGD|1564416 [details] [associations]
symbol:RGD1564416 "similar to Heterogeneous nuclear
ribonucleoprotein A1 (Helix-destabilizing protein
(Topoisomerase-inhibitor suppressed)" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1564416 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00388666 Ensembl:ENSRNOT00000037037 Uniprot:F1LZ88
Length = 314
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 70/154 (45%), Positives = 99/154 (64%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
R I GL + TTDESL+ E + VM+DP TKRSRGFGF+ Y+ + VD M+
Sbjct: 14 RVYLIRGLSFETTDESLKTM-ENTSNFL---VMRDPNTKRSRGFGFVPYTTVEEVDATMN 69
Query: 77 NRPHNIDGRVVETKR-AVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIE 134
RPH + GRVV KR + ++ +P A T+KK+ VGG+ +D EE LR+YF +G E
Sbjct: 70 ARPHKVGGRVVGPKRVSCGMEKSQRPGAPLTMKKVLVGGINEDTEEHHLRDYFEWYGKTE 129
Query: 135 SVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ ++T++ + KRGFAF+ F+D+D VDKIV+ K
Sbjct: 130 VIEIMTDRGSVKKRGFAFVTFDDHDSVDKIVIQK 163
Score = 136 (52.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 24/85 (28%), Positives = 50/85 (58%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P +++KV +GG++ T + L+ +FE +G+ + +M D + + RGF F+T+ + VD
Sbjct: 98 PLTMKKVLVGGINEDTEEHHLRDYFEWYGKTEVIEIMTDRGSVKKRGFAFVTFDDHDSVD 157
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDE 97
+ + H ++G E ++A+ + E
Sbjct: 158 KIVIQKYHTVNGHNCEVRKALSKQE 182
>UNIPROTKB|E2REM2 [details] [associations]
symbol:E2REM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03016228
Ensembl:ENSCAFT00000027720 Uniprot:E2REM2
Length = 207
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 69/134 (51%), Positives = 90/134 (67%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L+K+FIGGL + TTDESL++ FE WG + VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLQKLFIGGLSFETTDESLRSHFE-WGTLTGCVVMRDPNTKRSRGFGFVTYATVEEV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RPH +DGRVVE KRAV R++ +A+ TVKK+F GG + + S FG
Sbjct: 68 DAAMNARPHKVDGRVVEPKRAVSREDSQTLDAHLTVKKIFGGGSYN-DFGTYNNQSSNFG 126
Query: 132 TIESVNMVTNKETG 145
I+ N K +G
Sbjct: 127 PIKGGNF-GGKSSG 139
>UNIPROTKB|B4DHE8 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 EMBL:AK295060 IPI:IPI00910884
SMR:B4DHE8 STRING:B4DHE8 Ensembl:ENST00000416426 UCSC:uc010wnm.1
Uniprot:B4DHE8
Length = 324
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/147 (40%), Positives = 97/147 (65%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 61 HHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAM 118
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ +K T RGF F+ F + DVV+K+
Sbjct: 119 LMFDKTTNRHRGFGFVTFENEDVVEKV 145
Score = 174 (66.3 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKP 101
H I+ ++VE K+A P++ + P
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPP 172
Score = 117 (46.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 110 MFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
MF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK++
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 57
>RGD|1305280 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10116 "Rattus
norvegicus" [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005844 "polysome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1305280 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH474029 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
OrthoDB:EOG40ZQXT OMA:GGYDMYN IPI:IPI00365961 EMBL:BC098930
RefSeq:NP_001020913.1 UniGene:Rn.16769 SMR:Q4KLZ3 GeneID:362836
KEGG:rno:362836 UCSC:RGD:1305280 InParanoid:Q4KLZ3 NextBio:681451
Genevestigator:Q4KLZ3 Uniprot:Q4KLZ3
Length = 405
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 67/177 (37%), Positives = 105/177 (59%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 74 AMSNRPHNIDGRVVETKRAVPRD---EIGKPEA--------NATVKKMFVGGLKDQ-EED 121
+++RPH +DGR ++ K PR E +P+ ++ K+FVGG+ E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGET 126
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 127 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 183
Score = 181 (68.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 37/94 (39%), Positives = 59/94 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 104 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 157
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 158 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 191
>UNIPROTKB|Q98SJ2 [details] [associations]
symbol:dazap1 "DAZ-associated protein 1" species:8355
"Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0030154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0003723
CTD:26528 HOVERGEN:HBG002295 KO:K14411 EMBL:AY028920
RefSeq:NP_001082088.1 UniGene:Xl.1666 ProteinModelPortal:Q98SJ2
SMR:Q98SJ2 GeneID:398218 KEGG:xla:398218 Xenbase:XB-GENE-864805
Uniprot:Q98SJ2
Length = 360
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 67/179 (37%), Positives = 105/179 (58%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 74 AMSNRPHNIDGRVVETKRAVPRD---EIGKPEA----------NATVKKMFVGGLKDQ-E 119
+++RPH +DGR ++ K PR E +P N+ K+FVGG+
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCG 126
Query: 120 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
E +L+EYF++FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 127 ETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 185
Score = 180 (68.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 11 TEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKM 70
TE K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFGFIT+ + +
Sbjct: 108 TENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 167
Query: 71 VDDAMSNRPHNIDGRVVETKRAVPRD 96
VD A++ H+I G+ VE KRA PRD
Sbjct: 168 VDQAVNMHFHDIMGKKVEVKRAEPRD 193
>UNIPROTKB|H0YA96 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
ChiTaRS:HNRNPD Ensembl:ENST00000514671 Uniprot:H0YA96
Length = 210
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/152 (42%), Positives = 98/152 (64%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+ + E++ VD M
Sbjct: 2 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 61
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H ++G+V++ KRA + +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 62 KEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 115
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI F + + V KI+ K
Sbjct: 116 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 147
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 83 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 142
Query: 74 AMSNRPHNIDGRVVETKRAVPRDE 97
M + HN+ E K A+ +++
Sbjct: 143 IMEKKYHNVGLSKCEIKVAMSKEQ 166
>MGI|MGI:1917498 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0035613 "RNA stem-loop binding"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917498 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
ChiTaRS:DAZAP1 EMBL:AF225910 EMBL:BC049355 IPI:IPI00406492
IPI:IPI00406493 RefSeq:NP_001116076.1 RefSeq:NP_001116077.1
RefSeq:NP_573451.2 UniGene:Mm.148693 ProteinModelPortal:Q9JII5
SMR:Q9JII5 STRING:Q9JII5 PhosphoSite:Q9JII5
REPRODUCTION-2DPAGE:Q9JII5 PaxDb:Q9JII5 PRIDE:Q9JII5
Ensembl:ENSMUST00000092305 Ensembl:ENSMUST00000105362 GeneID:70248
KEGG:mmu:70248 UCSC:uc007gcl.2 UCSC:uc007gcm.2
GeneTree:ENSGT00700000104255 InParanoid:Q9JII5 NextBio:331250
Bgee:Q9JII5 CleanEx:MM_DAZAP1 Genevestigator:Q9JII5
GermOnline:ENSMUSG00000069565 Uniprot:Q9JII5
Length = 406
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 67/178 (37%), Positives = 105/178 (58%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 74 AMSNRPHNIDGRVVETKRAVPRD---EIGKPEA---------NATVKKMFVGGLKDQ-EE 120
+++RPH +DGR ++ K PR E +P+ ++ K+FVGG+ E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGE 126
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 181 (68.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 37/94 (39%), Positives = 59/94 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 192
>UNIPROTKB|F2Z3S1 [details] [associations]
symbol:Dazap1 "Protein Dazap1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1305280 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 IPI:IPI00365961
ProteinModelPortal:F2Z3S1 SMR:F2Z3S1 PRIDE:F2Z3S1
Ensembl:ENSRNOT00000046886 Uniprot:F2Z3S1
Length = 406
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 67/178 (37%), Positives = 105/178 (58%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 74 AMSNRPHNIDGRVVETKRAVPRD---EIGKPEA---------NATVKKMFVGGLKDQ-EE 120
+++RPH +DGR ++ K PR E +P+ ++ K+FVGG+ E
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGE 126
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LREYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Score = 181 (68.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 37/94 (39%), Positives = 59/94 (62%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 105 PRSDSSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 158
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 159 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 192
>UNIPROTKB|F1NTG9 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AADN02058490 IPI:IPI00577519
Ensembl:ENSGALT00000024525 ArrayExpress:F1NTG9 Uniprot:F1NTG9
Length = 398
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 68/174 (39%), Positives = 102/174 (58%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 RPHNIDGRVVETKRAVPRD---EIGKPEA---------NATVKKMFVGGLKDQ-EEDDLR 124
RPH +DGR ++ K PR E +P+ N K+FVGG+ E +LR
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELR 120
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
EYF +FG + V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 174
Score = 176 (67.0 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD A++
Sbjct: 104 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 163
Query: 78 RPHNIDGRVVETKRAVPRD 96
H+I G+ VE KRA PRD
Sbjct: 164 HFHDIMGKKVEVKRAEPRD 182
>UNIPROTKB|Q5ZIH1 [details] [associations]
symbol:HNRNPD "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0043488 "regulation of mRNA stability"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
UniGene:Gga.4605 GeneTree:ENSGT00700000104347 KO:K13044
OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ EMBL:AADN02009040
EMBL:AJ720813 IPI:IPI00597667 RefSeq:NP_001026314.1 SMR:Q5ZIH1
STRING:Q5ZIH1 Ensembl:ENSGALT00000018234 GeneID:422602
KEGG:gga:422602 InParanoid:Q5ZIH1 NextBio:20825212 Uniprot:Q5ZIH1
Length = 257
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 64/151 (42%), Positives = 97/151 (64%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+ + E++ VD M +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
H ++G+V++ KRA + +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 61 EHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEEKIREYFGAFGEVESIE 114
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI F + + V KI+ K
Sbjct: 115 LPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 145
Score = 140 (54.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 37/149 (24%), Positives = 73/149 (48%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F +GE+ + + D T + RGF FIT+ E + V
Sbjct: 81 EPVKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 140
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ---EEDDLREYFSQF 130
M + HN+ E K A+ +++ + + + + FVG + + + + +S +
Sbjct: 141 IMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGS-RGGFVGRARGRGGGPSQNWNQGYSNY 199
Query: 131 GTIESVNMVTNKET-GAKRGFAFIEFNDY 158
N N + G G+ + +N+Y
Sbjct: 200 WNQGYGNYGYNSQGYGGYGGYDYTGYNNY 228
>UNIPROTKB|K7EQ02 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
Ensembl:ENST00000592453 Uniprot:K7EQ02
Length = 225
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 65/166 (39%), Positives = 100/166 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + K+F+GGLD+ TT E+L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGT 132
+++RPH +DGR + PR + N+ K+FVGG+ E +LREYF +FG
Sbjct: 67 VLASRPHTLDGR----NQKGPRSD------NSKSNKIFVGGIPHNCGETELREYFKKFGV 116
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+ V M+ + E RGF FI F D VD+ V ++ ++VE
Sbjct: 117 VTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 162
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 37/94 (39%), Positives = 60/94 (63%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR D+SK K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGF
Sbjct: 83 PRSDNSKSN------KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGF 136
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
IT+ + + VD A++ H+I G+ VE KRA PRD
Sbjct: 137 ITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 170
>ZFIN|ZDB-GENE-070424-97 [details] [associations]
symbol:hnrnpd "heterogeneous nuclear
ribonucleoprotein D" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070424-97 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:CR847788
IPI:IPI00512852 Ensembl:ENSDART00000101414
Ensembl:ENSDART00000123048 Uniprot:F1Q8A5
Length = 314
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 65/166 (39%), Positives = 104/166 (62%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+F+GGL + TT + L+ +F ++GE+VD + DP+T RSRGFGF+
Sbjct: 43 KIDASKNEEDEG--KMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFV 100
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDD 122
+ EA+ V+ ++ + H ++G+V++ K+A + +P VKK+FVGGL D E+
Sbjct: 101 LFKEAESVEKVITQKEHKLNGKVIDPKKAKAM-KTKEP-----VKKIFVGGLSPDTPEEK 154
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+REYF +G +ES+ + +T +RGF FI F + + V KI+ K
Sbjct: 155 IREYFDAYGEVESIELPMENKTNKRRGFCFITFKEEEPVKKIMEKK 200
Score = 147 (56.8 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 38/151 (25%), Positives = 72/151 (47%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL T +E ++ +F+ +GE+ + + + T + RGF FIT+ E + V
Sbjct: 136 EPVKKIFVGGLSPDTPEEKIREYFDAYGEVESIELPMENKTNKRRGFCFITFKEEEPVKK 195
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPE-----ANATVKKMFVGGLKDQEEDDLREYFS 128
M + HNI E K A+ +++ + + T + GG Y++
Sbjct: 196 IMEKKYHNIGLSKCEVKVAMSKEQYQQQQQWGGRGGYTSRGRGRGGPNQNWNQGYGNYWN 255
Query: 129 Q-FGTIESVNMVTNKETGAKRGFAFIEFNDY 158
Q +G + N+ G G+ + +N+Y
Sbjct: 256 QGYGNYGNYGY-NNQGYGGYGGYDYSGYNNY 285
>WB|WBGene00003423 [details] [associations]
symbol:msi-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:Z35601 EMBL:AB036738
PIR:T24148 RefSeq:NP_497799.1 UniGene:Cel.19474
ProteinModelPortal:G5EFS2 SMR:G5EFS2 EnsemblMetazoa:R10E9.1.1
EnsemblMetazoa:R10E9.1.2 GeneID:175514 KEGG:cel:CELE_R10E9.1
CTD:175514 WormBase:R10E9.1 OMA:VADKVCE NextBio:888480
Uniprot:G5EFS2
Length = 320
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 59/148 (39%), Positives = 96/148 (64%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++TT E+L+ +F ++GE+ + +VM+DP TKR+RGFGFIT+ + VD ++N
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESV 136
R H +DG+ ++ K A P+ K KK+F+GGL +D+++YF +G +E
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKT--KKVFIGGLSATSTLEDMKQYFETYGKVEDA 163
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKI 164
++ +K T RGF F+ F+ +V DK+
Sbjct: 164 MLMFDKATQRHRGFGFVTFDSDEVADKV 191
Score = 180 (68.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 39/120 (32%), Positives = 69/120 (57%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+KVFIGGL +T E ++ +FE +G++ D ++M D T+R RGFGF+T+ ++ D
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 77 NRPHNIDGRVVETKRAVPRD-----EIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
H I+G++VE K+A P++ ++ K A A + ++ G+ + +Y +FG
Sbjct: 194 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRA-AAARNLY--GMPPETLLAYAQYLPRFG 250
Score = 114 (45.2 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 109 KMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
KMF+GGL Q ++LR+YF +FG + ++ + T RGF FI F D VDK++
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVL 103
>WB|WBGene00019249 [details] [associations]
symbol:H28G03.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000002308 EMBL:FO081568 RefSeq:NP_741783.1
UniGene:Cel.17692 ProteinModelPortal:H2L0D0 SMR:H2L0D0 PRIDE:H2L0D0
EnsemblMetazoa:H28G03.1a.1 EnsemblMetazoa:H28G03.1a.2 GeneID:180791
KEGG:cel:CELE_H28G03.1 CTD:180791 WormBase:H28G03.1a OMA:HIVNERK
Uniprot:H2L0D0
Length = 336
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 67/177 (37%), Positives = 107/177 (60%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P LRK+FIGGL + TTDE L +F QWG +VD +V++DP TK SRGFGF+T++ +
Sbjct: 66 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAE 125
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGK---P---EAN-ATVKKMFVGGLKD--QEEDDL 123
AM++RPH + G+ V++KRA+PR+++ P E + A K+ + G+ + D L
Sbjct: 126 SAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSL 185
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL--SKITLLLDRRVE 178
R YF FGT++ V ++ G RG F+ + D + D+ + S ++ +R++E
Sbjct: 186 RVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 237
>ZFIN|ZDB-GENE-040426-2516 [details] [associations]
symbol:zgc:77052 "zgc:77052" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2516 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 InterPro:IPR012956
Pfam:PF08143 OrthoDB:EOG42BX9K EMBL:FP085391 EMBL:BC066681
IPI:IPI00497482 RefSeq:NP_998467.1 UniGene:Dr.75633 SMR:Q6NYA1
STRING:Q6NYA1 Ensembl:ENSDART00000098408 GeneID:406594
KEGG:dre:406594 OMA:EIKTYFS NextBio:20818146 Uniprot:Q6NYA1
Length = 309
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 66/164 (40%), Positives = 100/164 (60%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
D SKC E K+F+GGL + T+ + L+ +F ++GE++D + D T RSRGFGFI +
Sbjct: 36 DASKCEEDAG--KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILF 93
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLR 124
E+ VD + + H +DGR ++ KRA+ + +P VKK+FVGGL + E+ +R
Sbjct: 94 KESDSVDRVLQQKEHRLDGRQIDPKRAMAIKK--EP-----VKKIFVGGLNPETTEEKIR 146
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
EYF FG IE++ + T+ +T +RGF FI F + V KI+ K
Sbjct: 147 EYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILEKK 190
Score = 161 (61.7 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL+ TT+E ++ +F +GEI + + DP T + RGF FIT+ E V
Sbjct: 126 EPVKKIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKK 185
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + HN+ G E K A P++
Sbjct: 186 ILEKKYHNVCGSKCEIKIAQPKE 208
Score = 141 (54.7 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRD-EIGKPEANATVKKMFVGGLK-DQEEDDL 123
++ + ++ + + N++G + +I + KMFVGGL D + DL
Sbjct: 2 ADEQFMETSENGNEENLNGGEAAGENGAGEGLQIDASKCEEDAGKMFVGGLSWDTSKKDL 61
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
++YFS+FG + + + TG RGF FI F + D VD+++ K L R+++
Sbjct: 62 KDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQKEHRLDGRQID 116
>ZFIN|ZDB-GENE-070212-1 [details] [associations]
symbol:dazap1 "DAZ associated protein 1" species:7955
"Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-070212-1 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
EMBL:BX255969 EMBL:BX323045 IPI:IPI00961610
Ensembl:ENSDART00000104362 Bgee:F1QBG2 Uniprot:F1QBG2
Length = 407
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 66/178 (37%), Positives = 104/178 (58%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + K+F+GGLD+ TT E+L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 8 DEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRT 67
Query: 74 AMSNRPHNIDGRVVETKRAVPRD------------EIGKPEANATVKKMFVGGLKDQ-EE 120
+ +PHN+DGR ++ K PR + K ++N + KK+FVGG+ E
Sbjct: 68 VLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKS-KKIFVGGIPHNCGE 126
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+LR+YF++FG + V M+ + E RGF FI F VD+ V ++ ++VE
Sbjct: 127 AELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVE 184
Score = 173 (66.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 35/95 (36%), Positives = 59/95 (62%)
Query: 2 KPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
K + SK +S +K+F+GG+ + + L+ +F ++G + +VV++ D +R RGFG
Sbjct: 99 KDGWKGSKSDSNKS-KKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFG 157
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRD 96
FIT+ + VD A++ H+I G+ VE K+A PRD
Sbjct: 158 FITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 192
Score = 117 (46.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 103 ANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 161
A + K+FVGGL ++ LR YFSQ+G + ++ +K T RGF F++F D + V
Sbjct: 6 AGDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCV 65
Query: 162 DKIVLSKITLLLDRRVE 178
++ +K L R ++
Sbjct: 66 RTVLDTKPHNLDGRNID 82
>UNIPROTKB|Q7ZYE9 [details] [associations]
symbol:hnrnpab "Hnrpab-prov protein" species:8355 "Xenopus
laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOVERGEN:HBG002295 HSSP:Q14103 KO:K13044 InterPro:IPR012956
Pfam:PF08143 CTD:3182 EMBL:BC043814 RefSeq:NP_001080489.1
UniGene:Xl.45404 ProteinModelPortal:Q7ZYE9 SMR:Q7ZYE9 IntAct:Q7ZYE9
GeneID:380181 KEGG:xla:380181 Xenbase:XB-GENE-6043063
Uniprot:Q7ZYE9
Length = 324
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 61/152 (40%), Positives = 97/152 (63%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T+ + L+ +F ++GE+ D + DP T RSRGFGFI + +A+ VD + +
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVLEH 124
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESV 136
+ H +DGR+++ K+A+ + P +KK+FVGGL + ED +REYF FG IE++
Sbjct: 125 KEHRLDGRLIDPKKAMAMKK--DP-----IKKIFVGGLNPEAGEDQIREYFETFGEIEAI 177
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI F + D V KI+ K
Sbjct: 178 ELPMDPKTNKRRGFVFITFKEEDPVKKILEKK 209
Score = 152 (58.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ ++ ++ +FE +GEI + + DP T + RGF FIT+ E V
Sbjct: 145 DPIKKIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKK 204
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + HN+ G E K A P++
Sbjct: 205 ILEKKFHNVSGSKCEIKIAQPKE 227
>UNIPROTKB|L7N074 [details] [associations]
symbol:L7N074 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA]
GeneTree:ENSGT00550000074566 EMBL:AAEX03002768
Ensembl:ENSCAFT00000009744 Uniprot:L7N074
Length = 204
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 62/126 (49%), Positives = 84/126 (66%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FI L + TT+ SL+ EQWG + + +VM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRVLSFETTNRSLRNPLEQWGTLTNCMVMRDPDTKCSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RPH +DGRVVETKRAV R++ +P A+ TVKK+F G + + S FG
Sbjct: 69 DPAMNTRPHKVDGRVVETKRAVSREDSQRPGAHLTVKKIFYSGGTYNDFGNYNNKSSNFG 128
Query: 132 TIESVN 137
++ N
Sbjct: 129 PLKGGN 134
>MGI|MGI:1330294 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003688 "DNA
replication origin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1330294 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
GO:GO:0001837 UniGene:Mm.490267 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 OrthoDB:EOG42BX9K
ChiTaRS:HNRNPAB EMBL:D90151 EMBL:L36663 EMBL:AK076132
IPI:IPI00117288 PIR:JQ0448 RefSeq:NP_034578.1 UniGene:Mm.280842
ProteinModelPortal:Q99020 SMR:Q99020 DIP:DIP-31415N IntAct:Q99020
MINT:MINT-4132837 STRING:Q99020 PhosphoSite:Q99020 PaxDb:Q99020
PRIDE:Q99020 Ensembl:ENSMUST00000074669 GeneID:15384 KEGG:mmu:15384
NextBio:288056 Bgee:Q99020 Genevestigator:Q99020
GermOnline:ENSMUSG00000020358 Uniprot:Q99020
Length = 285
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/156 (39%), Positives = 97/156 (62%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + ++ V+
Sbjct: 72 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF QFG
Sbjct: 132 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGQFGE 184
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + + +RGF FI F + D V K++ K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKK 220
Score = 147 (56.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F Q+GEI + + DP + RGF FIT+ E V
Sbjct: 156 DPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H + G E K A P++
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQPKE 238
Score = 136 (52.9 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 63 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 122
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 123 FKDSSSVEK-VLDQKEHRLDGRV 144
>RGD|69255 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10116 "Rattus norvegicus" [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003688 "DNA replication origin binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0045892 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003688 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
Pfam:PF08143 PIR:PC4375 PIR:PC4376 PIR:PC4377 UniGene:Rn.1427
UniGene:Rn.217734 EMBL:AF108653 IPI:IPI00208193
ProteinModelPortal:Q9Z0U8 SMR:Q9Z0U8 IntAct:Q9Z0U8 MINT:MINT-7138483
STRING:Q9Z0U8 PRIDE:Q9Z0U8 UCSC:RGD:69255 Genevestigator:Q9Z0U8
Uniprot:Q9Z0U8
Length = 298
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/156 (39%), Positives = 97/156 (62%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + ++ V+
Sbjct: 85 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 144
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF QFG
Sbjct: 145 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGQFGE 197
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + + +RGF FI F + D V K++ K
Sbjct: 198 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKK 233
Score = 147 (56.8 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F Q+GEI + + DP + RGF FIT+ E V
Sbjct: 169 DPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 228
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H + G E K A P++
Sbjct: 229 VLEKKFHTVSGSKCEIKVAQPKE 251
Score = 136 (52.9 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 76 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 135
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 136 FKDSSSVEK-VLDQKEHRLDGRV 157
>UNIPROTKB|E9PTS0 [details] [associations]
symbol:Hnrnpab "Protein Hnrnpab" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR012956 Pfam:PF08143 EMBL:AC105470 IPI:IPI00951862
Ensembl:ENSRNOT00000065584 ArrayExpress:E9PTS0 Uniprot:E9PTS0
Length = 331
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/156 (39%), Positives = 97/156 (62%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + ++ V+
Sbjct: 71 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 130
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF QFG
Sbjct: 131 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGQFGE 183
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + + +RGF FI F + D V K++ K
Sbjct: 184 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKK 219
Score = 147 (56.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F Q+GEI + + DP + RGF FIT+ E V
Sbjct: 155 DPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 214
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H + G E K A P++
Sbjct: 215 VLEKKFHTVSGSKCEIKVAQPKE 237
Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 62 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 121
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 122 FKDSSSVEK-VLDQKEHRLDGRV 143
>UNIPROTKB|Q9QX80 [details] [associations]
symbol:Hnrnpab "Hnrpab protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295
HSSP:Q14103 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 EMBL:AC105470
EMBL:AF216753 EMBL:BC066664 EMBL:AJ238855 IPI:IPI00212723
PIR:PC4375 PIR:PC4376 PIR:PC4377 RefSeq:NP_112620.2
RefSeq:XP_003750864.1 UniGene:Rn.1427 UniGene:Rn.217734 SMR:Q9QX80
STRING:Q9QX80 Ensembl:ENSRNOT00000033056 GeneID:100910156
GeneID:83498 KEGG:rno:100910156 KEGG:rno:83498 NextBio:615904
Genevestigator:Q9QX80 Uniprot:Q9QX80
Length = 285
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/156 (39%), Positives = 97/156 (62%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + ++ V+
Sbjct: 72 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF QFG
Sbjct: 132 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGQFGE 184
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + + +RGF FI F + D V K++ K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKK 220
Score = 147 (56.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F Q+GEI + + DP + RGF FIT+ E V
Sbjct: 156 DPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H + G E K A P++
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQPKE 238
Score = 136 (52.9 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 63 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 122
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 123 FKDSSSVEK-VLDQKEHRLDGRV 144
>UNIPROTKB|Q9QX81 [details] [associations]
symbol:Hnrnpab "RCG34663, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001837 "epithelial to mesenchymal transition" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 GO:GO:0001837
EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 OMA:FILFKDP OrthoDB:EOG42BX9K EMBL:AC105470 PIR:PC4375
PIR:PC4376 PIR:PC4377 UniGene:Rn.1427 UniGene:Rn.217734
GeneID:100910156 KEGG:rno:100910156 EMBL:AJ238854 IPI:IPI00212724
RefSeq:XP_003750865.1 SMR:Q9QX81 STRING:Q9QX81
Ensembl:ENSRNOT00000004885 InParanoid:Q9QX81 Genevestigator:Q9QX81
Uniprot:Q9QX81
Length = 332
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/156 (39%), Positives = 97/156 (62%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + ++ V+
Sbjct: 72 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF QFG
Sbjct: 132 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGQFGE 184
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + + +RGF FI F + D V K++ K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKK 220
Score = 147 (56.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F Q+GEI + + DP + RGF FIT+ E V
Sbjct: 156 DPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H + G E K A P++
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQPKE 238
Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 63 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 122
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 123 FKDSSSVEK-VLDQKEHRLDGRV 144
>RGD|1309950 [details] [associations]
symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein D-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1309950 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
Length = 322
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 61/157 (38%), Positives = 96/157 (61%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P S K+FIGGL + T+ + L + ++GE+VD + DP+T RSRGFGF+ + +A VD
Sbjct: 47 PTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 106
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
+ + H +DG++++ KRA GK KK+FVGGL D E+ ++EYF FG
Sbjct: 107 KVLELKEHKLDGKLIDPKRAKALK--GKEPP----KKVFVGGLSPDTSEEQIKEYFGAFG 160
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + +T +RGF FI + D + V K++ S+
Sbjct: 161 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESR 197
Score = 141 (54.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T++E ++ +F +GEI ++ + D T RGF FITY++ + V
Sbjct: 133 EPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 192
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ +R H I E K A P++
Sbjct: 193 LLESRYHQIGSGKCEIKVAQPKE 215
>UNIPROTKB|Q3SWU3 [details] [associations]
symbol:Hnrpdl "Heterogeneous nuclear ribonucleoprotein
D-like" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1309950
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
Length = 322
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 61/157 (38%), Positives = 96/157 (61%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P S K+FIGGL + T+ + L + ++GE+VD + DP+T RSRGFGF+ + +A VD
Sbjct: 47 PTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 106
Query: 73 DAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 131
+ + H +DG++++ KRA GK KK+FVGGL D E+ ++EYF FG
Sbjct: 107 KVLELKEHKLDGKLIDPKRAKALK--GKEPP----KKVFVGGLSPDTSEEQIKEYFGAFG 160
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + +T +RGF FI + D + V K++ S+
Sbjct: 161 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESR 197
Score = 141 (54.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T++E ++ +F +GEI ++ + D T RGF FITY++ + V
Sbjct: 133 EPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 192
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ +R H I E K A P++
Sbjct: 193 LLESRYHQIGSGKCEIKVAQPKE 215
>UNIPROTKB|Q3ZC44 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 CTD:3182 OMA:FILFKDP EMBL:DAAA02020063
EMBL:DAAA02020062 EMBL:BC102923 IPI:IPI00843025
RefSeq:NP_001035612.1 UniGene:Bt.58979 SMR:Q3ZC44
Ensembl:ENSBTAT00000018114 GeneID:513410 KEGG:bta:513410
NextBio:20870841 Uniprot:Q3ZC44
Length = 285
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 61/166 (36%), Positives = 101/166 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + +A V+
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEK 126
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF +FG
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGE 179
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
IE++ + + ++ +RGF FI F + + V K++ K + + E
Sbjct: 180 IEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCE 225
Score = 151 (58.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 28/83 (33%), Positives = 50/83 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F ++GEI + + DP + + RGF FIT+ E + V
Sbjct: 151 DPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKK 210
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H I G E K A P++
Sbjct: 211 VLEKKFHTISGSKCEIKVAQPKE 233
Score = 135 (52.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 118 FKDATSVEK-VLDQKEHRLDGRV 139
>TAIR|locus:2133862 [details] [associations]
symbol:AT4G26650 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0042732 "D-xylose
metabolic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 EMBL:AF419605 EMBL:AY097345 IPI:IPI00533249
RefSeq:NP_567753.1 UniGene:At.20416 UniGene:At.67937
ProteinModelPortal:Q8W569 SMR:Q8W569 STRING:Q8W569 PRIDE:Q8W569
EnsemblPlants:AT4G26650.1 GeneID:828772 KEGG:ath:AT4G26650
TAIR:At4g26650 InParanoid:Q8W569 OMA:LVEAVIM PhylomeDB:Q8W569
ProtClustDB:CLSN2689626 Genevestigator:Q8W569 Uniprot:Q8W569
Length = 455
Score = 212 (79.7 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 40/97 (41%), Positives = 65/97 (67%)
Query: 1 MKPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGF 60
M P ++ K L K+FIGG+ + T +E LQ +F ++G++V+ V+M+D T R+RGF
Sbjct: 1 MNP--EEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGF 58
Query: 61 GFITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
GFI +++ + + + ++ H IDGR VE K+AVPRD+
Sbjct: 59 GFIVFADPSVAERVIMDK-HIIDGRTVEAKKAVPRDD 94
Score = 194 (73.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 36/80 (45%), Positives = 54/80 (67%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T+ + +F+Q+G I DVVVM D T+R RGFGFIT+ + VD +
Sbjct: 122 KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLH 181
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H ++G++VE KRAVP++
Sbjct: 182 KTFHELNGKMVEVKRAVPKE 201
Score = 134 (52.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 27/80 (33%), Positives = 50/80 (62%)
Query: 100 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 158
K E+ + + K+F+GG+ D +E+ L+EYF ++G + ++ ++ TG RGF FI F D
Sbjct: 7 KMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADP 66
Query: 159 DVVDKIVLSKITLLLDRRVE 178
V +++++ K ++ R VE
Sbjct: 67 SVAERVIMDK-HIIDGRTVE 85
Score = 121 (47.7 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 105 ATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 163
A KK+FVGGL E + + YF QFGTI V ++ + T RGF FI F+ + VD
Sbjct: 119 ARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVD- 177
Query: 164 IVLSK 168
+VL K
Sbjct: 178 MVLHK 182
>TAIR|locus:2077392 [details] [associations]
symbol:AT3G07810 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 IPI:IPI00546643 RefSeq:NP_850539.1 UniGene:At.19375
ProteinModelPortal:F4JFN7 SMR:F4JFN7 PRIDE:F4JFN7
EnsemblPlants:AT3G07810.2 GeneID:819972 KEGG:ath:AT3G07810
OMA:YYIGNTN Uniprot:F4JFN7
Length = 495
Score = 308 (113.5 bits), Expect = 3.9e-27, P = 3.9e-27
Identities = 64/174 (36%), Positives = 102/174 (58%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+ + T +E L+ +F +GE+++ V++KD T R+RGFGF+ +++ + + ++
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 78 RPHNIDGRVVETKRAVPRDEI------------GKPEANATVKKMFVGGLKDQ-EEDDLR 124
+ HNIDGR+VE K+AVPRD+ G P +K+FVGGL E D +
Sbjct: 67 K-HNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFK 125
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
YF QFGT V ++ + T RGF FI ++ + V+K++L L + VE
Sbjct: 126 TYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVE 179
Score = 203 (76.5 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 38/84 (45%), Positives = 54/84 (64%)
Query: 13 PESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
P RK+F+GGL T+ + +FEQ+G DVVVM D T+R RGFGFITY + V+
Sbjct: 104 PGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVE 163
Query: 73 DAMSNRPHNIDGRVVETKRAVPRD 96
+ H ++G++VE KRAVP++
Sbjct: 164 KVLLKTFHELNGKMVEVKRAVPKE 187
>UNIPROTKB|D6R9P3 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00964686 ProteinModelPortal:D6R9P3
SMR:D6R9P3 Ensembl:ENST00000515193 ArrayExpress:D6R9P3 Bgee:D6R9P3
Uniprot:D6R9P3
Length = 280
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 60/156 (38%), Positives = 97/156 (62%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + +A V+
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF +FG
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGE 179
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + + +RGF FI F + + V K++ K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKK 215
Score = 148 (57.2 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F ++GEI + + DP + RGF FIT+ E + V
Sbjct: 151 DPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H + G E K A P++
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQPKE 233
Score = 134 (52.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 118 FKDAASVEK-VLDQKEHRLDGRV 139
>UNIPROTKB|D6RBZ0 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00964992 ProteinModelPortal:D6RBZ0
SMR:D6RBZ0 Ensembl:ENST00000506339 ArrayExpress:D6RBZ0 Bgee:D6RBZ0
Uniprot:D6RBZ0
Length = 327
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 60/156 (38%), Positives = 97/156 (62%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + +A V+
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF +FG
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGE 179
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + + +RGF FI F + + V K++ K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKK 215
Score = 148 (57.2 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F ++GEI + + DP + RGF FIT+ E + V
Sbjct: 151 DPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H + G E K A P++
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQPKE 233
Score = 134 (52.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 118 FKDAASVEK-VLDQKEHRLDGRV 139
>UNIPROTKB|D6RD18 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00966854 ProteinModelPortal:D6RD18
SMR:D6RD18 Ensembl:ENST00000514633 ArrayExpress:D6RD18 Bgee:D6RD18
Uniprot:D6RD18
Length = 283
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 60/156 (38%), Positives = 97/156 (62%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + +A V+
Sbjct: 67 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF +FG
Sbjct: 127 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGE 179
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + + +RGF FI F + + V K++ K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKK 215
Score = 148 (57.2 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F ++GEI + + DP + RGF FIT+ E + V
Sbjct: 151 DPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H + G E K A P++
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQPKE 233
Score = 134 (52.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 117
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 118 FKDAASVEK-VLDQKEHRLDGRV 139
>UNIPROTKB|F1PA19 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AAEX03007693 EMBL:AAEX03007694
Ensembl:ENSCAFT00000000377 OMA:GNDSSYG Uniprot:F1PA19
Length = 264
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 59/152 (38%), Positives = 97/152 (63%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + +A V+ +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESV 136
+ H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF +FG IE++
Sbjct: 61 KEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGEIEAI 113
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + ++ +RGF FI F + + V K++ K
Sbjct: 114 ELPMDPKSNKRRGFVFITFKEEEPVKKVLEKK 145
Score = 136 (52.9 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F ++GEI + + DP + + RGF FIT+ E + V
Sbjct: 81 DPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKK 140
Query: 74 AMSNRPHNIDG 84
+ + H I G
Sbjct: 141 VLEKKFHTISG 151
>UNIPROTKB|Q99729 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
evidence=TAS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0001837
EMBL:CH471165 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 KO:K13044 InterPro:IPR012956 Pfam:PF08143
EMBL:M65028 EMBL:U76713 EMBL:AK054600 EMBL:AK097657 EMBL:BC001616
EMBL:BC002625 EMBL:BC004561 EMBL:BC009359 EMBL:BC036708
IPI:IPI00106509 IPI:IPI00329355 IPI:IPI00334587 IPI:IPI00334713
PIR:S17563 RefSeq:NP_004490.2 RefSeq:NP_112556.2 UniGene:Hs.591731
UniGene:Hs.715055 PDB:3S7R PDBsum:3S7R ProteinModelPortal:Q99729
SMR:Q99729 IntAct:Q99729 MINT:MINT-4537784 STRING:Q99729
PhosphoSite:Q99729 DMDM:158523286 SWISS-2DPAGE:Q99729 PaxDb:Q99729
PRIDE:Q99729 Ensembl:ENST00000355836 Ensembl:ENST00000358344
Ensembl:ENST00000504898 Ensembl:ENST00000506259 GeneID:3182
KEGG:hsa:3182 UCSC:uc003miu.3 UCSC:uc003miv.3 CTD:3182
GeneCards:GC05P177631 HGNC:HGNC:5034 HPA:HPA046688 MIM:602688
neXtProt:NX_Q99729 PharmGKB:PA162391196 InParanoid:Q99729
OMA:FILFKDP OrthoDB:EOG42BX9K ChiTaRS:HNRNPAB
EvolutionaryTrace:Q99729 GenomeRNAi:3182 NextBio:12628
ArrayExpress:Q99729 Bgee:Q99729 CleanEx:HS_HNRNPAB
Genevestigator:Q99729 GermOnline:ENSG00000197451 Uniprot:Q99729
Length = 332
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 60/157 (38%), Positives = 97/157 (61%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + DP T RSRGFGFI + +A V+
Sbjct: 66 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 125
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE--EDDLREYFSQFG 131
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF +FG
Sbjct: 126 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPESPTEEKIREYFGEFG 178
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + + +RGF FI F + + V K++ K
Sbjct: 179 EIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKK 215
Score = 140 (54.3 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 27/84 (32%), Positives = 50/84 (59%)
Query: 14 ESLRKVFIGGLDYRT-TDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVD 72
+ ++K+F+GGL+ + T+E ++ +F ++GEI + + DP + RGF FIT+ E + V
Sbjct: 150 DPVKKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVK 209
Query: 73 DAMSNRPHNIDGRVVETKRAVPRD 96
+ + H + G E K A P++
Sbjct: 210 KVLEKKFHTVSGSKCEIKVAQPKE 233
Score = 134 (52.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 154
D+I + KMFVGGL D + DL++YF++FG + + + TG RGF FI
Sbjct: 57 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFIL 116
Query: 155 FNDYDVVDKIVLSKITLLLDRRV 177
F D V+K VL + LD RV
Sbjct: 117 FKDAASVEK-VLDQKEHRLDGRV 138
>UNIPROTKB|F1NIB2 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
GeneTree:ENSGT00700000104347 OMA:FILFKDP EMBL:AADN02028501
EMBL:AADN02028502 EMBL:AADN02028503 IPI:IPI00574172
Ensembl:ENSGALT00000023234 ArrayExpress:F1NIB2 Uniprot:F1NIB2
Length = 263
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 59/152 (38%), Positives = 95/152 (62%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T+ + L+ +F ++GE+ D + DP T RSRGFGFI + E V+ +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESV 136
+ H +DGR+++ K+A+ + P VKK+FVGGL + E+ +REYF +FG IE++
Sbjct: 61 KEHRLDGRLIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGEIEAI 113
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI F + D V K++ K
Sbjct: 114 ELPMDPKTNKRRGFVFITFKEEDPVKKVLEKK 145
Score = 158 (60.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F ++GEI + + DP T + RGF FIT+ E V
Sbjct: 81 DPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKK 140
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + HN+ G E K A P++
Sbjct: 141 VLEKKFHNVSGSKCEIKVAQPKE 163
>UNIPROTKB|F1NIB4 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AADN02028501 EMBL:AADN02028502
EMBL:AADN02028503 IPI:IPI00603451 ProteinModelPortal:F1NIB4
Ensembl:ENSGALT00000023233 ArrayExpress:F1NIB4 Uniprot:F1NIB4
Length = 212
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 59/152 (38%), Positives = 95/152 (62%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GGL + T+ + L+ +F ++GE+ D + DP T RSRGFGFI + E V+ +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESV 136
+ H +DGR+++ K+A+ + P VKK+FVGGL + E+ +REYF +FG IE++
Sbjct: 61 KEHRLDGRLIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGEIEAI 113
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI F + D V K++ K
Sbjct: 114 ELPMDPKTNKRRGFVFITFKEEDPVKKVLEKK 145
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F ++GEI + + DP T + RGF FIT+ E V
Sbjct: 81 DPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKK 140
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + HN+ G E K A P++
Sbjct: 141 VLEKKFHNVSGSKCEIKVAQPKE 163
>UNIPROTKB|F1N2T0 [details] [associations]
symbol:HNRPDL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
OMA:QHPPADN EMBL:DAAA02018246 IPI:IPI00697542 UniGene:Bt.23277
PRIDE:F1N2T0 Ensembl:ENSBTAT00000019699 ArrayExpress:F1N2T0
Uniprot:F1N2T0
Length = 420
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 59/152 (38%), Positives = 94/152 (61%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + T+ + L + ++GE+VD + DP+T RSRGFGF+ + +A VD +
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA GK KK+FVGGL D E+ ++EYF FG IE++
Sbjct: 209 KEHKLDGKLIDPKRAKALK--GKEPP----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI + D + V K++ S+
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESR 294
Score = 141 (54.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T++E ++ +F +GEI ++ + D T RGF FITY++ + V
Sbjct: 230 EPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ +R H I E K A P++
Sbjct: 290 LLESRYHQIGSGKCEIKVAQPKE 312
>UNIPROTKB|E2QRT0 [details] [associations]
symbol:HNRPDL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 CTD:9987
GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
EMBL:AAEX03016723 RefSeq:XP_858404.1 Ensembl:ENSCAFT00000014224
GeneID:476976 KEGG:cfa:476976 NextBio:20852539 Uniprot:E2QRT0
Length = 420
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 59/152 (38%), Positives = 94/152 (61%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + T+ + L + ++GE+VD + DP+T RSRGFGF+ + +A VD +
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA GK KK+FVGGL D E+ ++EYF FG IE++
Sbjct: 209 KEHKLDGKLIDPKRAKALK--GKEPP----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI + D + V K++ S+
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESR 294
Score = 141 (54.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T++E ++ +F +GEI ++ + D T RGF FITY++ + V
Sbjct: 230 EPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ +R H I E K A P++
Sbjct: 290 LLESRYHQIGSGKCEIKVAQPKE 312
>UNIPROTKB|O14979 [details] [associations]
symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
D-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034046 "poly(G) RNA binding"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=NAS]
[GO:0006396 "RNA processing" evidence=NAS] [GO:0010468 "regulation
of gene expression" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:D89678 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0005681
GO:GO:0003723 GO:GO:0006396 GO:GO:0003690 GO:GO:0003697
GO:GO:0010468 GO:GO:0034046 eggNOG:COG0724 GO:GO:0008143
HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987
KO:K13044 EMBL:AB017019 EMBL:D89092 EMBL:AB066484 EMBL:CR407623
EMBL:AC124016 EMBL:AB017018 EMBL:BC007392 EMBL:BC011714
EMBL:BC071944 EMBL:AY453824 IPI:IPI00011274 IPI:IPI00045498
IPI:IPI00845282 PIR:JW0079 RefSeq:NP_001193929.1 RefSeq:NP_112740.1
UniGene:Hs.527105 UniGene:Hs.731516 ProteinModelPortal:O14979
SMR:O14979 IntAct:O14979 STRING:O14979 PhosphoSite:O14979
PaxDb:O14979 PRIDE:O14979 DNASU:9987 Ensembl:ENST00000295470
Ensembl:ENST00000349655 Ensembl:ENST00000502762 GeneID:9987
KEGG:hsa:9987 UCSC:uc003hmr.3 GeneCards:GC04M083343 HGNC:HGNC:5037
MIM:607137 neXtProt:NX_O14979 PharmGKB:PA29362 InParanoid:O14979
OMA:QHPPADN OrthoDB:EOG49W2FZ PhylomeDB:O14979 ChiTaRS:HNRPDL
GenomeRNAi:9987 NextBio:37714 ArrayExpress:O14979 Bgee:O14979
CleanEx:HS_HNRPDL Genevestigator:O14979 Uniprot:O14979
Length = 420
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 59/152 (38%), Positives = 94/152 (61%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + T+ + L + ++GE+VD + DP+T RSRGFGF+ + +A VD +
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA GK KK+FVGGL D E+ ++EYF FG IE++
Sbjct: 209 KEHKLDGKLIDPKRAKALK--GKEPP----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI + D + V K++ S+
Sbjct: 263 ELPMDTKTNERRGFCFITYTDEEPVKKLLESR 294
Score = 141 (54.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T++E ++ +F +GEI ++ + D T RGF FITY++ + V
Sbjct: 230 EPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ +R H I E K A P++
Sbjct: 290 LLESRYHQIGSGKCEIKVAQPKE 312
>MGI|MGI:1355299 [details] [associations]
symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein
D-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008143 "poly(A)
RNA binding" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0016071 "mRNA metabolic process"
evidence=ISA] [GO:0034046 "poly(G) RNA binding" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1355299 GO:GO:0005634 GO:GO:0005737
GO:GO:0016071 GO:GO:0006355 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103 ChiTaRS:HNRPDL
EMBL:AB017020 EMBL:AK011581 EMBL:AK172629 EMBL:BC021374
IPI:IPI00129417 UniGene:Mm.389579 ProteinModelPortal:Q9Z130
SMR:Q9Z130 IntAct:Q9Z130 STRING:Q9Z130 PhosphoSite:Q9Z130
PaxDb:Q9Z130 PRIDE:Q9Z130 InParanoid:Q9Z130 Bgee:Q9Z130
CleanEx:MM_HNRPDL Genevestigator:Q9Z130 Uniprot:Q9Z130
Length = 301
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 59/152 (38%), Positives = 94/152 (61%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + T+ + L + ++GE+VD + DP+T RSRGFGF+ + +A VD +
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA GK KK+FVGGL D E+ ++EYF FG IE++
Sbjct: 90 KEHKLDGKLIDPKRAKALK--GKEPP----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI + D + V K++ S+
Sbjct: 144 ELPMDTKTNERRGFCFITYTDEEPVKKLLESR 175
Score = 141 (54.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T++E ++ +F +GEI ++ + D T RGF FITY++ + V
Sbjct: 111 EPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ +R H I E K A P++
Sbjct: 171 LLESRYHQIGSGKCEIKVAQPKE 193
>TAIR|locus:504955752 [details] [associations]
symbol:AT3G13224 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441 HSSP:Q14103
KO:K12741 OMA:HAINGHH EMBL:AP002042 EMBL:AY080630 EMBL:AY123003
EMBL:AK221448 IPI:IPI00534312 RefSeq:NP_683559.2 UniGene:At.27259
ProteinModelPortal:Q9LHL2 SMR:Q9LHL2 IntAct:Q9LHL2 PRIDE:Q9LHL2
EnsemblPlants:AT3G13224.2 GeneID:820515 KEGG:ath:AT3G13224
TAIR:At3g13224 InParanoid:Q9LHL2 PhylomeDB:Q9LHL2
ProtClustDB:CLSN2918087 Genevestigator:Q9LHL2 Uniprot:Q9LHL2
Length = 358
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 65/180 (36%), Positives = 108/180 (60%)
Query: 2 KPRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
+ R D+ + + S K+FIGGL TT+ F ++GEI D V+M+D T + RGFG
Sbjct: 4 RSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFG 63
Query: 62 FITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EE 120
FIT+++ +VD + + H I+G+ VE KR +P+ G + KK+FVGG+ E
Sbjct: 64 FITFADPSVVDKVIEDT-HVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTE 122
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLL--LDRRVE 178
D+L+++F+++G + ++ + ET RGF F+ F+ +VVD++ LSK ++ D +VE
Sbjct: 123 DELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDEL-LSKGNMIDMADTQVE 181
Score = 153 (58.9 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 30/86 (34%), Positives = 55/86 (63%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GG+ T++ L+ FF ++G +V+ V++D T RSRGFGF+ + ++VD+ +S
Sbjct: 109 KKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLS 168
Query: 77 NRPHNID--GRVVETKRAVPRDEIGK 100
+ + ID VE K+A P+ + +
Sbjct: 169 -KGNMIDMADTQVEIKKAEPKKSLNR 193
>UNIPROTKB|F1PD20 [details] [associations]
symbol:F1PD20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03013453
Ensembl:ENSCAFT00000007675 Uniprot:F1PD20
Length = 309
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 71/159 (44%), Positives = 99/159 (62%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL TTDESL++ EQWG + D V M+DP KRSRGFG +
Sbjct: 9 EPQ-LRKLFIGGLSLETTDESLRSHSEQWGRLADCVAMRDPKAKRSRGFGV----GPGPL 63
Query: 72 DDAMSNRPHNID-GRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
++A + P + GR T+RAV + +P A+ +FVGG+K D EE R+ Q
Sbjct: 64 EEAAAQEPGPPEVGRAW-TQRAVSPGDSRRPGAH-----IFVGGIKGDPEEHHPRDCLEQ 117
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+G +E + VT++ G +RGFAF+ F+D+D VDKIV+ K
Sbjct: 118 YGNVEVMETVTDRGRGEERGFAFVTFDDHDSVDKIVIQK 156
>UNIPROTKB|L7N066 [details] [associations]
symbol:L7N066 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA]
GeneTree:ENSGT00550000074566 EMBL:AAEX03013421
Ensembl:ENSCAFT00000006911 Uniprot:L7N066
Length = 309
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 71/159 (44%), Positives = 99/159 (62%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP+ LRK+FIGGL TTDESL++ EQWG + D V M+DP KRSRGFG +
Sbjct: 9 EPQ-LRKLFIGGLSLETTDESLRSHSEQWGRLADCVAMRDPKAKRSRGFGV----GPGPL 63
Query: 72 DDAMSNRPHNID-GRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 129
++A + P + GR T+RAV + +P A+ +FVGG+K D EE R+ Q
Sbjct: 64 EEAAAQEPGPPEVGRAW-TQRAVSPGDSRRPGAH-----IFVGGIKGDPEEHHPRDCLEQ 117
Query: 130 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+G +E + VT++ G +RGFAF+ F+D+D VDKIV+ K
Sbjct: 118 YGNVEVMETVTDRGRGEERGFAFVTFDDHDSVDKIVIQK 156
>ZFIN|ZDB-GENE-030131-185 [details] [associations]
symbol:hnrnpab "heterogeneous nuclear
ribonucleoprotein A/B" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-185
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
EMBL:CU658205 IPI:IPI01023938 Ensembl:ENSDART00000148447
ArrayExpress:F8W4E3 Uniprot:F8W4E3
Length = 366
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 60/156 (38%), Positives = 96/156 (61%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+ D + DP T RSRGFGFI + E VD
Sbjct: 92 EDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDK 151
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
++ + H +DGR ++ K+A+ + +P VKK+FVGGL + E+ +REYF FG
Sbjct: 152 VLAQKEHRLDGRQIDPKKAMAMKK--EP-----VKKIFVGGLNPETTEERIREYFGAFGE 204
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
IE++ + + ++ +RGF FI F + + V KI+ K
Sbjct: 205 IETIELPMDPKSNKRRGFVFITFKEEEAVKKILEKK 240
Score = 149 (57.5 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 29/90 (32%), Positives = 53/90 (58%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E ++K+F+GGL+ TT+E ++ +F +GEI + + DP + + RGF FIT+ E + V
Sbjct: 176 EPVKKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKK 235
Query: 74 AMSNRPHNIDG-RVVETKRAVPRDEIGKPE 102
+ + HN+ G + K + +I +P+
Sbjct: 236 ILEKKYHNVSGTKDTSGKEGLCEIKIAQPK 265
Score = 136 (52.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMFVGGL D + DL++YFS+FG + + + TG RGF FI F + VDK++
Sbjct: 96 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 155
Query: 168 KITLLLDRRVE 178
K L R+++
Sbjct: 156 KEHRLDGRQID 166
>UNIPROTKB|Q9XSY6 [details] [associations]
symbol:Q9XSY6 "HnRNP A/B related protein" species:9685
"Felis catus" [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0001837 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
Pfam:PF08143 EMBL:AF153444 ProteinModelPortal:Q9XSY6 Uniprot:Q9XSY6
Length = 279
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 60/166 (36%), Positives = 100/166 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E K+F+GGL + T+ + L+ +F ++GE+VD + P T RS+GFGFI + +A V+
Sbjct: 61 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEK 120
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 132
+ + H +DGRV++ K+A+ + P VKK+FVGGL + E+ +REYF +FG
Sbjct: 121 VLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREYFGEFGE 173
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
IE++ + + +T +RGF FI F + + V K++ K + + E
Sbjct: 174 IEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCE 219
Score = 155 (59.6 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ ++K+F+GGL+ T+E ++ +F ++GEI + + DP T + RGF FIT+ E + V
Sbjct: 145 DPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKK 204
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ + H I G E K A P++
Sbjct: 205 VLEKKFHTISGSKCEIKVAQPKE 227
Score = 130 (50.8 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 35/85 (41%), Positives = 48/85 (56%)
Query: 96 DEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE--SVNMVTNKETGAKRGFAF 152
D+I + KMFVGGL D + DL++YF++FG + ++ MV N TG +GF F
Sbjct: 52 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPN--TGRSKGFGF 109
Query: 153 IEFNDYDVVDKIVLSKITLLLDRRV 177
I F D V+K VL + LD RV
Sbjct: 110 ILFKDAASVEK-VLDQKEHRLDGRV 133
>UNIPROTKB|F1P8M3 [details] [associations]
symbol:F1P8M3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03015267
Ensembl:ENSCAFT00000039191 Uniprot:F1P8M3
Length = 210
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 57/103 (55%), Positives = 75/103 (72%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E E L FI GL ++TT E+L++ FEQWG ++D V M+DP TK SRGFGF+ Y+ + V
Sbjct: 9 ELEQLWNFFISGLSFKTTYETLRSHFEQWGMLIDCVAMRDPNTKLSRGFGFVMYATMEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGG 114
D AM RPH +DGRVVE KRAV +++ +P A+ TVKK+FVGG
Sbjct: 69 DAAMKARPHKVDGRVVERKRAVSQEDSQRPGAHLTVKKIFVGG 111
>UNIPROTKB|F1NCV5 [details] [associations]
symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00700000104347 OMA:QHPPADN
EMBL:AADN02009038 EMBL:AADN02009039 IPI:IPI00822447
Ensembl:ENSGALT00000038016 Uniprot:F1NCV5
Length = 338
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 58/152 (38%), Positives = 94/152 (61%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + T+ + L + ++GE+VD + DP+T RSRGFGF+ + +A V+ +
Sbjct: 67 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 126
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA GK KK+FVGGL D E+ ++EYF FG IE++
Sbjct: 127 KEHKLDGKLIDPKRAKALK--GKEPP----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 180
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI + D + V K++ S+
Sbjct: 181 ELPMDTKTNERRGFCFITYTDEEPVKKLLESR 212
Score = 141 (54.7 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T++E ++ +F +GEI ++ + D T RGF FITY++ + V
Sbjct: 148 EPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 207
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ +R H I E K A P++
Sbjct: 208 LLESRYHQIGSGKCEIKVAQPKE 230
>UNIPROTKB|Q5ZI72 [details] [associations]
symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 EMBL:AJ720912 IPI:IPI00591109
RefSeq:NP_001026313.1 UniGene:Gga.4605 HSSP:Q14103
ProteinModelPortal:Q5ZI72 SMR:Q5ZI72 PRIDE:Q5ZI72
Ensembl:ENSGALT00000018235 GeneID:422601 KEGG:gga:422601 CTD:9987
GeneTree:ENSGT00700000104347 KO:K13044 NextBio:20825211
Uniprot:Q5ZI72
Length = 301
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 58/152 (38%), Positives = 94/152 (61%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + T+ + L + ++GE+VD + DP+T RSRGFGF+ + +A V+ +
Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +DG++++ KRA GK KK+FVGGL D E+ ++EYF FG IE++
Sbjct: 91 KEHKLDGKLIDPKRAKALK--GKEPP----KKVFVGGLSPDTSEEQIKEYFGAFGEIENI 144
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ + +T +RGF FI + D + V K++ S+
Sbjct: 145 ELPMDTKTNERRGFCFITYTDEEPVKKLLESR 176
Score = 141 (54.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T++E ++ +F +GEI ++ + D T RGF FITY++ + V
Sbjct: 112 EPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 171
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ +R H I E K A P++
Sbjct: 172 LLESRYHQIGSGKCEIKVAQPKE 194
>FB|FBgn0004838 [details] [associations]
symbol:Hrb27C "Heterogeneous nuclear ribonucleoprotein at
27C" species:7227 "Drosophila melanogaster" [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0048027 "mRNA 5'-UTR binding" evidence=NAS;TAS] [GO:0007319
"negative regulation of oskar mRNA translation" evidence=TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA;TAS] [GO:0007317
"regulation of pole plasm oskar mRNA localization" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0045451 "pole
plasm oskar mRNA localization" evidence=IMP] [GO:0048024
"regulation of mRNA splicing, via spliceosome" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0007411 GO:GO:0043234 GO:GO:0005654
EMBL:AE014134 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007298
GO:GO:0048027 GO:GO:0003730 GO:GO:0003697 GO:GO:0030529
GO:GO:0046331 GO:GO:0045727 GO:GO:0048024 GO:GO:0007319
eggNOG:COG0724 GO:GO:0045451 KO:K14411 GeneTree:ENSGT00700000104255
EMBL:X62639 EMBL:DQ062784 EMBL:AY069699 EMBL:AY128430 EMBL:S51720
PIR:D41732 RefSeq:NP_001162897.1 RefSeq:NP_001162898.1
RefSeq:NP_001245917.1 RefSeq:NP_001245918.1 RefSeq:NP_001245919.1
RefSeq:NP_476869.1 RefSeq:NP_723228.1 RefSeq:NP_723229.1
UniGene:Dm.1997 ProteinModelPortal:P48809 SMR:P48809 IntAct:P48809
MINT:MINT-939547 STRING:P48809 PaxDb:P48809
EnsemblMetazoa:FBtr0079346 EnsemblMetazoa:FBtr0079347
EnsemblMetazoa:FBtr0079348 EnsemblMetazoa:FBtr0301403
EnsemblMetazoa:FBtr0301404 EnsemblMetazoa:FBtr0307030
EnsemblMetazoa:FBtr0307031 EnsemblMetazoa:FBtr0307032 GeneID:33968
KEGG:dme:Dmel_CG10377 CTD:33968 FlyBase:FBgn0004838
InParanoid:P48809 OMA:GGYDMYN OrthoDB:EOG4CJSZQ PhylomeDB:P48809
ChiTaRS:Hrb27C GenomeRNAi:33968 NextBio:786189 Bgee:P48809
GermOnline:CG10377 Uniprot:P48809
Length = 421
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 60/168 (35%), Positives = 101/168 (60%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
E + K+F+GGL + TT E+L +F ++G+I+D VVMK+ + RSRGFGF+T+++ V
Sbjct: 2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNV 61
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQF 130
+ + N PH +DGR ++ K PR + KP+ K +F+GGL E DLR +F+++
Sbjct: 62 NHVLQNGPHTLDGRTIDPKPCNPRT-LQKPKKGGGYK-VFLGGLPSNVTETDLRTFFNRY 119
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
G + V ++ ++E RGF F+ F + V+ + + L ++VE
Sbjct: 120 GKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVE 167
Score = 193 (73.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 38/91 (41%), Positives = 59/91 (64%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
KVF+GGL T+ L+ FF ++G++ +VV+M D K+SRGFGF+++ E V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEAN-ATV 107
R N++G+ VE K+A PRD G +N +TV
Sbjct: 157 RYINLNGKQVEIKKAEPRDGSGGQNSNNSTV 187
>TAIR|locus:2007903 [details] [associations]
symbol:AT1G17640 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 OMA:GHQTGYK IPI:IPI00519530 RefSeq:NP_173208.1
UniGene:At.51654 ProteinModelPortal:F4I906 SMR:F4I906 PRIDE:F4I906
EnsemblPlants:AT1G17640.1 GeneID:838341 KEGG:ath:AT1G17640
Uniprot:F4I906
Length = 369
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 66/178 (37%), Positives = 105/178 (58%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R+ S + P K+F+GG+ + TT E+ +F ++GE+VD V+M D IT RGFGF+
Sbjct: 56 RHSSSSMSSPG---KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFV 112
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPR-DEIGKPEANATVKKMFVGGLKDQ-EED 121
T++++ + + + H ID R V+ KR +PR D+ +A + +K+FVGGL EED
Sbjct: 113 TFADSAVAEKVLEE-DHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEED 171
Query: 122 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS-KITLLLDRRVE 178
+L+ YF +G I ++ + TG RGF F+ F D VD++ K+ L D++VE
Sbjct: 172 ELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVE 229
Score = 157 (60.3 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 40/120 (33%), Positives = 63/120 (52%)
Query: 3 PRYD-DSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFG 61
PR D D+ RK+F+GGL ++ L+ +F +G+I++ +M D T RSRGFG
Sbjct: 142 PRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFG 201
Query: 62 FITYSEAKMVDDAMSN-RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEE 120
F+T+ VD S+ + H + + VE KRA P+ G+ + + G DQE+
Sbjct: 202 FVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPK-RTGRDNS---FRSYGASGKYDQED 257
>TAIR|locus:2168848 [details] [associations]
symbol:AT5G40490 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 EMBL:AB009052 HOGENOM:HOG000234441
HSSP:Q61474 KO:K12741 eggNOG:NOG289504 EMBL:AY136466
IPI:IPI00518075 RefSeq:NP_198865.1 UniGene:At.30284
ProteinModelPortal:Q9FM47 SMR:Q9FM47 PaxDb:Q9FM47 PRIDE:Q9FM47
EnsemblPlants:AT5G40490.1 GeneID:834047 KEGG:ath:AT5G40490
TAIR:At5g40490 InParanoid:Q9FM47 OMA:YESEDMV PhylomeDB:Q9FM47
ProtClustDB:CLSN2916909 ArrayExpress:Q9FM47 Genevestigator:Q9FM47
Uniprot:Q9FM47
Length = 423
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/153 (37%), Positives = 91/153 (59%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+S K+F+GGL TT F ++GEI D V+MKD T + RGFGF+TY+++ +VD
Sbjct: 39 DSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDK 98
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGT 132
+ + H I G+ VE KR +PR + + KK+FVGG+ +DD +E+F QFG
Sbjct: 99 VIQDN-HIIIGKQVEIKRTIPRGSMSSNDFKT--KKIFVGGIPSSVDDDEFKEFFMQFGE 155
Query: 133 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ ++ + TG RGF F+ + D+VD ++
Sbjct: 156 LKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLL 188
Score = 170 (64.9 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 39/97 (40%), Positives = 55/97 (56%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD--A 74
+K+F+GG+ D+ + FF Q+GE+ + +M+D T RSRGFGF+TY MVD A
Sbjct: 130 KKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLA 189
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMF 111
NR + G VE K+A P+ KP + T K F
Sbjct: 190 KGNRIE-LSGTQVEIKKAEPK----KPNSVTTPSKRF 221
>ZFIN|ZDB-GENE-040426-2717 [details] [associations]
symbol:hnrpdl "heterogeneous nuclear
ribonucleoprotein D-like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-2717
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
CTD:9987 GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
OrthoDB:EOG49W2FZ EMBL:CR847788 EMBL:BC055525 IPI:IPI00500216
RefSeq:NP_998557.1 UniGene:Dr.75234 SMR:Q7SXN2 STRING:Q7SXN2
Ensembl:ENSDART00000020631 GeneID:406701 KEGG:dre:406701
InParanoid:Q7SXN2 NextBio:20818224 Uniprot:Q7SXN2
Length = 296
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/149 (39%), Positives = 93/149 (62%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL + T+ + L + ++GE++D + DP+T RSRGFGF+ + +A+ VD +
Sbjct: 31 KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLEL 90
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
H +DG++++ KRA + GK KK+FVGGL D E+ LREYF +G IES+
Sbjct: 91 TEHKLDGKLIDPKRA--KAIKGKEPP----KKVFVGGLSPDITEEQLREYFGVYGEIESI 144
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+ T+ +T +RGF F+ F + V K++
Sbjct: 145 ELPTDTKTNERRGFCFVTFALEEPVQKLL 173
Score = 139 (54.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 35/101 (34%), Positives = 53/101 (52%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T+E L+ +F +GEI + + D T RGF F+T++ + V
Sbjct: 112 EPPKKVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQK 171
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGG 114
+ NR H I E K A P+ E+ + + N + F GG
Sbjct: 172 LLENRYHQIGSGKCEIKVAQPK-EVYRQQQNRD--RGFGGG 209
>TAIR|locus:2173967 [details] [associations]
symbol:AT5G55550 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 ProtClustDB:CLSN2689626 EMBL:AY050796
EMBL:AY096460 IPI:IPI00543007 RefSeq:NP_568826.1 RefSeq:NP_974937.1
UniGene:At.6910 ProteinModelPortal:Q949Z3 SMR:Q949Z3 PRIDE:Q949Z3
EnsemblPlants:AT5G55550.2 EnsemblPlants:AT5G55550.3 GeneID:835649
KEGG:ath:AT5G55550 TAIR:At5g55550 InParanoid:Q949Z3 OMA:VSERVIM
PhylomeDB:Q949Z3 Genevestigator:Q949Z3 Uniprot:Q949Z3
Length = 460
Score = 290 (107.1 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 64/165 (38%), Positives = 100/165 (60%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAM 75
L K+FIGG+ + T +E L+ +F +G++V+ V+M+D T R+RGFGFI +++ + + +
Sbjct: 5 LGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI 64
Query: 76 SNRPHNIDGRVVETKRAVPRDE--IGKPEAN------------ATVKKMFVGGLKDQ-EE 120
++ H IDGR VE K+AVPRD+ + K A+ KK+FVGGL E
Sbjct: 65 MDK-HIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITE 123
Query: 121 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
++ + YF QFGTI V ++ + T RGF FI F+ D VD+++
Sbjct: 124 EEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVL 168
Score = 199 (75.1 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T+E + +F+Q+G I DVVVM D T+R RGFGFIT+ VD +
Sbjct: 110 KKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLH 169
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEAN 104
H ++G++VE KRAVP+ EI P +N
Sbjct: 170 KTFHELNGKLVEVKRAVPK-EIS-PVSN 195
Score = 128 (50.1 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
K+F+GG+ D +E+ LR+YFS +G + ++ ++ TG RGF FI F D V +++++
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 168 KITLLLDRRVE 178
K ++ R VE
Sbjct: 67 K-HIIDGRTVE 76
>UNIPROTKB|J3KQA8 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
ProteinModelPortal:J3KQA8 Ensembl:ENST00000420780 Uniprot:J3KQA8
Length = 102
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 52/77 (67%), Positives = 63/77 (81%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRK+FIGGL + TTDESL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVE 88
D AM+ RPH +DGRVVE
Sbjct: 69 DAAMNARPHKVDGRVVE 85
Score = 102 (41.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 101 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 159
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 160 VVD 162
VD
Sbjct: 67 EVD 69
>UNIPROTKB|F1MZQ6 [details] [associations]
symbol:F1MZQ6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:DAAA02073436 IPI:IPI00689139
Ensembl:ENSBTAT00000030499 Uniprot:F1MZQ6
Length = 284
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 67/151 (44%), Positives = 95/151 (62%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+F+ GL + TT+ES E+ + + VM+DP TK SR FGF+TY+ + VD MS R
Sbjct: 1 LFMEGLSFETTNESNN---EECSQTM--WVMRDPNTKCSRSFGFVTYATVEEVDATMSAR 55
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 137
P +D RVVE KRAV ++ + +A+ TVKK+F G K D EE LR+YF Q+G N
Sbjct: 56 PLKVD-RVVEPKRAVSGEDSQRLDAHLTVKKIFAGDNKEDAEEHHLRDYFEQYGKTGDQN 114
Query: 138 MVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
++ +G KRGFAF+ +D+D +DK V+ K
Sbjct: 115 Q-NHQGSGQKRGFAFVVSDDHDSIDKTVIQK 144
>UNIPROTKB|J9P0Y4 [details] [associations]
symbol:J9P0Y4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 EMBL:AAEX03013644
Ensembl:ENSCAFT00000045249 OMA:SEEGYNG Uniprot:J9P0Y4
Length = 223
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 58/130 (44%), Positives = 85/130 (65%)
Query: 16 LRKVFIGGLDYRTTDESLQAFFEQWGEIV-------DVVVMKDPITKRSRGFGFITYSEA 68
L+K+F GGL + TTDESL++ EQWG + D VV++D TKRSR FG+ T E
Sbjct: 1 LQKLFFGGLSFETTDESLRSHSEQWGILTVVCVLMRDYVVLRDSNTKRSRSFGYATMGEV 60
Query: 69 KMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 127
+ + M+ +PH +DG VE KR + ++ +P A+ T++K+FVGG+K D EE LR+YF
Sbjct: 61 EAI---MNGKPHKVDGIAVELKRPISKESSQRPGAHLTLRKIFVGGIKEDAEEHHLRDYF 117
Query: 128 SQFGTIESVN 137
Q+G IE ++
Sbjct: 118 EQYGKIEMID 127
>UNIPROTKB|F1LRH1 [details] [associations]
symbol:Msi1 "RNA-binding protein Musashi homolog 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:628778 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0005844 GeneTree:ENSGT00700000104255
IPI:IPI00202463 Ensembl:ENSRNOT00000001532 ArrayExpress:F1LRH1
Uniprot:F1LRH1
Length = 329
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 52/135 (38%), Positives = 85/135 (62%)
Query: 31 ESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETK 90
E L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD ++ H +D + ++ K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 91 RAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRG 149
A PR +P+ KK+FVGGL + +D++ YF QFG ++ ++ +K T RG
Sbjct: 61 VAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRG 118
Query: 150 FAFIEFNDYDVVDKI 164
F F+ F D+V+K+
Sbjct: 119 FGFVTFESEDIVEKV 133
Score = 181 (68.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 76 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 136 IHFHEINNKMVECKKAQPK-EVMSPTGSA 163
>UNIPROTKB|D6RAF8 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956 Pfam:PF08143
IPI:IPI00965952 ProteinModelPortal:D6RAF8 SMR:D6RAF8
Ensembl:ENST00000507010 ArrayExpress:D6RAF8 Bgee:D6RAF8
Uniprot:D6RAF8
Length = 221
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 58/143 (40%), Positives = 91/143 (63%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
PR+ ++ + E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF
Sbjct: 84 PRHSEAATAQREEW-KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEED 121
+ + E++ VD M + H ++G+V++ KRA + +P VKK+FVGGL D E+
Sbjct: 143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEE 196
Query: 122 DLREYFSQFGTIESVNMVTNKET 144
+REYF FG +ES+ + + +T
Sbjct: 197 KIREYFGGFGEVESIELPMDNKT 219
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK++
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 168 K 168
K
Sbjct: 158 K 158
>UNIPROTKB|F1PSN2 [details] [associations]
symbol:F1PSN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 EMBL:AAEX03003214
Ensembl:ENSCAFT00000027618 Uniprot:F1PSN2
Length = 268
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 66/158 (41%), Positives = 94/158 (59%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP LRK F L ++TT++ ++ EQW E VD VV K SRGFG +TY+ + V
Sbjct: 8 EPAQLRKFFTEVLRFKTTNDRPRSPSEQWREFVDYVVNH----KHSRGFGSVTYATVEEV 63
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 130
D AM+ RPH +D RVVE KR V + ATV+ +FVG +K D EE L+ Y Q+
Sbjct: 64 DAAMNARPHKVDARVVEPKRDV---------SEATVQNIFVGDIKEDTEEYHLQNYLEQY 114
Query: 131 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
G +++ + + +G KRGFAF+ F+ +D + +IV K
Sbjct: 115 GKTKAIESMNDLGSGKKRGFAFMTFDGHDSIGRIVTQK 152
>UNIPROTKB|I3LPG0 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:FP690339 Ensembl:ENSSSCT00000027694 Uniprot:I3LPG0
Length = 332
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 52/135 (38%), Positives = 85/135 (62%)
Query: 31 ESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNIDGRVVETK 90
E L+ +F Q+GE + +VM+DP+TKRSRGFGF+T+ + VD ++ H +D + ++ K
Sbjct: 1 EGLREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 91 RAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRG 149
A PR +P+ KK+FVGGL + +D+++YF QFG ++ ++ +K T RG
Sbjct: 61 VAFPRR--AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRG 118
Query: 150 FAFIEFNDYDVVDKI 164
F F+ F D+V+K+
Sbjct: 119 FGFVTFESEDIVEKV 133
Score = 182 (69.1 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT E ++ +FEQ+G++ D ++M D T R RGFGF+T+ +V+
Sbjct: 76 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
H I+ ++VE K+A P+ E+ P +A
Sbjct: 136 IHFHEINNKMVECKKAQPK-EVMSPTGSA 163
>UNIPROTKB|F1M108 [details] [associations]
symbol:F1M108 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00190264
Ensembl:ENSRNOT00000023750 Uniprot:F1M108
Length = 294
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 71/157 (45%), Positives = 95/157 (60%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EP L K+FI GL SL++ FEQ G + VVM+DP TKRSRGFGF+T V
Sbjct: 9 EPGQLWKLFIRGL-------SLRSHFEQRGTLPGCVVMRDPNTKRSRGFGFVT-----KV 56
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM +PH +DG VV KRAV + + A+ TVK+ GG+K+ D E+ FG
Sbjct: 57 DAAMKAKPHKVDGGVVGPKRAVS-EHSQRAGAHLTVKESSAGGVKE----DTGEHHRLFG 111
Query: 132 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
T+ N++T + +G KR AF+ F++YD VDKIV+ K
Sbjct: 112 TVWE-NIMTVRGSGKKRDVAFVTFDEYDSVDKIVIQK 147
>UNIPROTKB|F1PD64 [details] [associations]
symbol:F1PD64 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03002771
Ensembl:ENSCAFT00000021102 Uniprot:F1PD64
Length = 256
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 52/89 (58%), Positives = 65/89 (73%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FI GL + TT+ESL++ FEQWG + D V M+DP TK SRG GF+TY+ + V
Sbjct: 9 EPEQLWKLFIRGLSFETTNESLRSHFEQWGTLTDWVAMRDPNTKHSRGLGFVTYATVEEV 68
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGK 100
D AM+ RPH +DGRVVE KRAV R + K
Sbjct: 69 DAAMNTRPHKVDGRVVEPKRAVSRQDCHK 97
>UNIPROTKB|L7N0C2 [details] [associations]
symbol:L7N0C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA]
GeneTree:ENSGT00550000074566 EMBL:AAEX03014397
Ensembl:ENSCAFT00000016130 Uniprot:L7N0C2
Length = 278
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 53/93 (56%), Positives = 71/93 (76%)
Query: 78 RP-HNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 135
RP H +DGRVVE KRAV R++ +P A+ TVKK+FVGG+K D EE LR+YF Q+G IE
Sbjct: 38 RPAHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 97
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+ ++T + +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 98 IEIMTGRGSGKKRGFAFVTFDDHDSVDKIVIQK 130
Score = 141 (54.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 24/90 (26%), Positives = 53/90 (58%)
Query: 15 SLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDA 74
+++K+F+GG+ T + L+ +FEQ+G+I + +M + + RGF F+T+ + VD
Sbjct: 67 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTGRGSGKKRGFAFVTFDDHDSVDKI 126
Query: 75 MSNRPHNIDGRVVETKRAVPRDEIGKPEAN 104
+ + H ++G E ++A+ + E+ ++
Sbjct: 127 VIQKYHTVNGHNCEVRKALSKQEMASASSS 156
>DICTYBASE|DDB_G0292422 [details] [associations]
symbol:DDB_G0292422 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0292422 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000190 KO:K14411
eggNOG:NOG289504 RefSeq:XP_629598.1 ProteinModelPortal:Q54D98
EnsemblProtists:DDB0233639 GeneID:8628658 KEGG:ddi:DDB_G0292422
InParanoid:Q54D98 OMA:YYEDESS Uniprot:Q54D98
Length = 687
Score = 280 (103.6 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 63/177 (35%), Positives = 112/177 (63%)
Query: 6 DDSKCTEPESLR-KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMK-DPITKRSRGFGFI 63
+ S + P+S+ K+F+GGL +++E L+ +F +GE+ + +V+K +SRGFGF+
Sbjct: 94 EGSNLSLPKSISGKIFVGGLLKTSSNEILKDYFSNFGEVKESIVIKATEKASKSRGFGFV 153
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDD 122
T+ + ++D+ + H+I+G+ VE +RA+P++E+ + +K+FVGGL K DD
Sbjct: 154 TFVDPSVIDEVILIN-HSIEGKNVEIRRAIPKEEMTEEPKK---QKLFVGGLPKHITSDD 209
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKIT-LLLDRRVE 178
YFS+FG I N++T K G +GF FI F D + V++I+L++ ++L +RV+
Sbjct: 210 FNNYFSEFGEISEYNLLTEKN-GTIKGFGFICFKD-ESVNEIILNEQQHIILGKRVD 264
>UNIPROTKB|I3LJN1 [details] [associations]
symbol:I3LJN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051170 "nuclear import" evidence=IEA] [GO:0051168 "nuclear
export" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:CU407216
Ensembl:ENSSSCT00000027879 Uniprot:I3LJN1
Length = 207
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 57/123 (46%), Positives = 77/123 (62%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE K+FIGGL + TTDE L++ E WG + D VM+ P TKRSRGFGF+TY+ V
Sbjct: 9 EPEL--KLFIGGLSFETTDEGLRSHSEPWGTLTDHAVMRGPNTKRSRGFGFVTYATVGEV 66
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM+ RPH +DGRVVE KR V R++ +P A+ +KK + G + + S FG
Sbjct: 67 DAAMNARPHKVDGRVVEPKR-VSREDSQRPGAHVALKKT-LSGRSYSDFGNYNNQSSNFG 124
Query: 132 TIE 134
++
Sbjct: 125 PMK 127
>UNIPROTKB|F1PW36 [details] [associations]
symbol:F1PW36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00550000074566 EMBL:AAEX03009913
ProteinModelPortal:F1PW36 Ensembl:ENSCAFT00000009888 Uniprot:F1PW36
Length = 230
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 63/152 (41%), Positives = 92/152 (60%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIG L + TT+E+ WG + D +VM+DP TK F+T + VD AM+
Sbjct: 1 KLFIGDLSFETTNET-------WGMLSDFLVMRDPNTKH----WFVTCATVDKVDAAMTP 49
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
RP +DGRV E K AV R++ K A+ TVK++FV G+K D EE LR+YF +G E
Sbjct: 50 RPQKVDGRVEEPKTAVSREDSQKHGAHLTVKRIFVDGIKEDTEEYRLRDYFEPYGKTEVN 109
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
+++T++ + K GFA + F+D+D V K + K
Sbjct: 110 DIMTDQGSSKKTGFA-LTFDDHDSVHKTGIQK 140
>UNIPROTKB|J3KTC1 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 Ensembl:ENST00000579590 Uniprot:J3KTC1
Length = 141
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 49/119 (41%), Positives = 80/119 (67%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGGL ++T+ +SL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 135
H +D + ++ K A PR +P+ KK+FVGGL + +D+++YF QFG + +
Sbjct: 78 PHHELDSKTIDPKVAFPRR--AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVSA 134
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 109 KMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK++
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 75
>UNIPROTKB|F1SP49 [details] [associations]
symbol:F1SP49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104376
EMBL:FP016004 Ensembl:ENSSSCT00000005972 OMA:SHTANGH
ArrayExpress:F1SP49 Uniprot:F1SP49
Length = 162
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 48/77 (62%), Positives = 59/77 (76%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE LRKVF+GGL + TTDE L++ EQWG + D VV +DP TKRSRGF F+TY+ + V
Sbjct: 16 EPEQLRKVFLGGLSFETTDERLRSHSEQWGTLTDCVVRRDPNTKRSRGFRFVTYTTVEEV 75
Query: 72 DDAMSNRPHNIDGRVVE 88
D AM+ RPH +DGRVVE
Sbjct: 76 DTAMNTRPHKVDGRVVE 92
>TAIR|locus:2129590 [details] [associations]
symbol:AT4G14300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002687 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:Z97335 EMBL:AL161538 GO:GO:0003676
GO:GO:0030529 eggNOG:COG0724 HOGENOM:HOG000234441 KO:K14411
HSSP:Q61474 EMBL:AJ303457 EMBL:AK226323 IPI:IPI00517003 PIR:G71404
RefSeq:NP_193166.2 UniGene:At.33295 ProteinModelPortal:Q8W034
SMR:Q8W034 IntAct:Q8W034 MINT:MINT-1163850 STRING:Q8W034
PaxDb:O23288 PRIDE:Q8W034 EnsemblPlants:AT4G14300.1 GeneID:827071
KEGG:ath:AT4G14300 TAIR:At4g14300 InParanoid:Q8W034 OMA:YGATNIP
PhylomeDB:Q8W034 ProtClustDB:CLSN2913105 Genevestigator:Q8W034
Uniprot:Q8W034
Length = 411
Score = 263 (97.6 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 57/176 (32%), Positives = 99/176 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ + T ++ L+ F +GE+ +VM+D +T R RGFGF+ +S+ ++D +
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66
Query: 78 RPHNIDGRVVETKRAVPRDE---IGKP-----------EANATVKKMFVGGLKDQ-EEDD 122
+ H+ID R V+ KRA+ R+E G+ +A KK+FVGGL +++
Sbjct: 67 K-HSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
R+YF +G + V ++ ++ T RGF F+ F+ D VD ++ L ++VE
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVE 181
Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TDE + +FE +G + DV +M D T R RGFGF+++ VD +
Sbjct: 110 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH 169
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H++ G+ VE KRA+P+D
Sbjct: 170 KTFHDLSGKQVEVKRALPKD 189
>UNIPROTKB|D6RF44 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
HGNC:HGNC:5036 ChiTaRS:HNRNPD IPI:IPI00967562
ProteinModelPortal:D6RF44 SMR:D6RF44 Ensembl:ENST00000515432
ArrayExpress:D6RF44 Bgee:D6RF44 Uniprot:D6RF44
Length = 112
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 53/118 (44%), Positives = 78/118 (66%)
Query: 19 VFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNR 78
+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+ + E++ VD M +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 79 PHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 135
H ++G+V++ KRA + +P VKK+FVGGL D E+ +REYF FG +ES
Sbjct: 61 EHKLNGKVIDPKRAKAM-KTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVES 112
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 110 MFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
MF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK++ K
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
>TAIR|locus:2050992 [details] [associations]
symbol:AT2G33410 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002685 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC002332 HOGENOM:HOG000234441 KO:K14411 HSSP:Q61474
ProtClustDB:CLSN2913105 OMA:GNDSSYG EMBL:AY136298 EMBL:BT000416
IPI:IPI00531202 PIR:B84745 RefSeq:NP_180899.1 UniGene:At.22217
ProteinModelPortal:O22791 SMR:O22791 IntAct:O22791 STRING:O22791
PRIDE:O22791 ProMEX:O22791 EnsemblPlants:AT2G33410.1 GeneID:817905
KEGG:ath:AT2G33410 TAIR:At2g33410 InParanoid:O22791
PhylomeDB:O22791 ArrayExpress:O22791 Genevestigator:O22791
Uniprot:O22791
Length = 404
Score = 261 (96.9 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 59/166 (35%), Positives = 94/166 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FIGG+ + T + L+ +F +GE++ V VM++ T R RGFGF+ +S+ ++D + +
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66
Query: 78 RPHNIDGRVVETKRAVPRDE---IGKPE-----------ANATVKKMFVGGLKDQ-EEDD 122
+ H+ID R V+ KRA+ R+E G+ AN KK+FVGGL D+
Sbjct: 67 K-HHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPALTSDE 125
Query: 123 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLSK 168
R YF +G + ++ ++ T RGF F+ F+ D VD +VL K
Sbjct: 126 FRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVD-LVLHK 170
Score = 183 (69.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL T + +A+FE +G + D V+M D T+R RGFGF+++ VD +
Sbjct: 110 KKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLH 169
Query: 77 NRPHNIDGRVVETKRAVPRD 96
H+++G+ VE KRA+P+D
Sbjct: 170 KTFHDLNGKQVEVKRALPKD 189
>UNIPROTKB|J9NZR9 [details] [associations]
symbol:J9NZR9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AAEX03000342
Ensembl:ENSCAFT00000001210 OMA:GSKINAN Uniprot:J9NZR9
Length = 269
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 56/149 (37%), Positives = 86/149 (57%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+FI GL + T+ + L +GE+VD ++ DP+T RSRGFGF+ + EA VD +
Sbjct: 17 KMFIRGLSWDTSKKDLT-----FGEVVDCIIETDPVTGRSRGFGFVLFKEAASVDKVLEL 71
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 136
+ H +D +++ KRA E P KK+FVGGL D E+ ++EY FG IE++
Sbjct: 72 KEHKLDSMLIDPKRAKALKE--PP------KKVFVGGLSPDTYEEQIKEYLGAFGEIENI 123
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+ + +T +RGF FI + D V K++
Sbjct: 124 ELPMDTKTNERRGFCFITYTDEKPVKKLL 152
Score = 141 (54.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
E +KVF+GGL T +E ++ + +GEI ++ + D T RGF FITY++ K V
Sbjct: 91 EPPKKVFVGGLSPDTYEEQIKEYLGAFGEIENIELPMDTKTNERRGFCFITYTDEKPVKK 150
Query: 74 AMSNRPHNIDGRVVETKRAVPRD 96
+ NR H I E K A P++
Sbjct: 151 LLENRYHQIGSGKCEIKVAEPKE 173
>UNIPROTKB|F1PJ22 [details] [associations]
symbol:F1PJ22 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00550000074566 EMBL:AAEX03017137
Ensembl:ENSCAFT00000029502 Uniprot:F1PJ22
Length = 204
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 54/123 (43%), Positives = 76/123 (61%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FI GL + TT+ESL+ EQWG + V ++DP TK SRGF +TY+ + V
Sbjct: 9 EPEQLHKLFIRGLGFETTNESLRRLCEQWGMLG--VAIRDPNTKCSRGF--VTYAPVEEV 64
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFG 131
D AM RPH +DGRVVE KRAV R++ +P A+ +K ++ G + + S FG
Sbjct: 65 DAAMDARPHKVDGRVVEPKRAVSREDSQRPGAHCKERKPYLSGGSCNDSGNYNNLSSNFG 124
Query: 132 TIE 134
++
Sbjct: 125 PMK 127
>WB|WBGene00022235 [details] [associations]
symbol:sqd-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0000003 GO:GO:0003676 EMBL:FO081731
eggNOG:COG0724 GeneTree:ENSGT00700000104255 KO:K03102
RefSeq:NP_001023574.1 ProteinModelPortal:Q4W5P0 SMR:Q4W5P0
STRING:Q4W5P0 PaxDb:Q4W5P0 PRIDE:Q4W5P0 EnsemblMetazoa:Y73B6BL.6b.1
EnsemblMetazoa:Y73B6BL.6b.2 EnsemblMetazoa:Y73B6BL.6b.3
EnsemblMetazoa:Y73B6BL.6b.4 EnsemblMetazoa:Y73B6BL.6b.5
EnsemblMetazoa:Y73B6BL.6b.6 EnsemblMetazoa:Y73B6BL.6b.7
EnsemblMetazoa:Y73B6BL.6b.8 GeneID:177392 KEGG:cel:CELE_Y73B6BL.6
UCSC:Y73B6BL.6a.7 CTD:177392 WormBase:Y73B6BL.6b
HOGENOM:HOG000017794 InParanoid:Q4W5P0 OMA:GHQTGYK NextBio:896614
ArrayExpress:Q4W5P0 Uniprot:Q4W5P0
Length = 308
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 55/159 (34%), Positives = 84/159 (52%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
++ T+ +K+F+GG+ +E L + F Q+GE+ V D RSRGF F+ +
Sbjct: 18 ENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLR 124
+ + A++ R I G+ VE K A R+ KK+FVGGL D E DLR
Sbjct: 78 TTGEGCKLALAAREQTIKGKSVEVKPAKSREN----------KKVFVGGLPSDYSEQDLR 127
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 163
+F QFG ++ + +K+T A+R FAFI F + + DK
Sbjct: 128 SHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADK 166
Score = 134 (52.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+KVF+GGL +++ L++ FEQ+G++ D+ D TK R F FI + E + D A S
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 77 NRPHNIDGRVVETKRAVPR 95
R + K+AVP+
Sbjct: 170 QTKQTFGTRECDVKKAVPQ 188
>FB|FBgn0263396 [details] [associations]
symbol:sqd "squid" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IC;IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0008069 "dorsal/ventral axis specification, ovarian follicular
epithelium" evidence=IMP] [GO:0007297 "ovarian follicle cell
migration" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP;TAS]
[GO:0008298 "intracellular mRNA localization" evidence=NAS;TAS]
[GO:0017148 "negative regulation of translation" evidence=TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0009953
"dorsal/ventral pattern formation" evidence=IMP;TAS] [GO:0006405
"RNA export from nucleus" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS] [GO:0003729 "mRNA
binding" evidence=ISS;NAS] [GO:0035062 "omega speckle"
evidence=IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0019094 "pole plasm mRNA localization"
evidence=IMP] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0016325 "oocyte microtubule cytoskeleton organization"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0007314 "oocyte anterior/posterior axis
specification" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IEP] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0033119 "negative regulation of RNA splicing"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0000785 GO:GO:0003730 GO:GO:0006406 GO:GO:0033119
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0030720
GO:GO:0007297 eggNOG:COG0724 GO:GO:0045451 GO:GO:0005703
GO:GO:0000381 GO:GO:0016325 GO:GO:0008069
GeneTree:ENSGT00700000104255 GO:GO:0035062 EMBL:X62637 EMBL:X62638
EMBL:S61875 EMBL:S62100 EMBL:AY118501 EMBL:BT001384 EMBL:BT003283
EMBL:BT023832 EMBL:S51693 PIR:A47369 PIR:B41732 PIR:B47369
PIR:C48110 RefSeq:NP_001247088.1 RefSeq:NP_652209.1
RefSeq:NP_731825.1 RefSeq:NP_731826.1 RefSeq:NP_996203.1
UniGene:Dm.7189 ProteinModelPortal:Q08473 SMR:Q08473 IntAct:Q08473
MINT:MINT-847475 STRING:Q08473 PaxDb:Q08473
EnsemblMetazoa:FBtr0082855 GeneID:41666 KEGG:dme:Dmel_CG16901
CTD:41666 FlyBase:FBgn0263396 InParanoid:Q08473 KO:K03102
OMA:GDIDSIN OrthoDB:EOG43BK52 PhylomeDB:Q08473 ChiTaRS:sqd
GenomeRNAi:41666 NextBio:824926 Bgee:Q08473 GermOnline:CG16901
Uniprot:Q08473
Length = 344
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 54/150 (36%), Positives = 86/150 (57%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+F+GGL + TT++ L+ F ++GEI + V DP T RSRGF FI ++ + +D +
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 135
H I+ + V+ K+A R GK +FVGGL + +++++ YF QFG I
Sbjct: 116 ADEHIINSKKVDPKKAKARH--GK---------IFVGGLTTEISDEEIKTYFGQFGNIVE 164
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
V M +K+ ++GF FI F+ VV ++
Sbjct: 165 VEMPFDKQKSQRKGFCFITFDSEQVVTDLL 194
Score = 154 (59.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 28/72 (38%), Positives = 50/72 (69%)
Query: 108 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVL 166
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 167 SKITLLLDRRVE 178
+ ++ ++V+
Sbjct: 116 ADEHIINSKKVD 127
Score = 153 (58.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 7 DSKCTEPESLR----KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGF 62
+SK +P+ + K+F+GGL +DE ++ +F Q+G IV+V + D + +GF F
Sbjct: 122 NSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCF 181
Query: 63 ITYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDE 97
IT+ ++V D + I G+ V+ KRA P+ E
Sbjct: 182 ITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
>TAIR|locus:2037633 [details] [associations]
symbol:RBP1 "RNA-binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0008283 "cell proliferation" evidence=TAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GO:GO:0000166 GO:GO:0008283
GO:GO:0003727 Gene3D:3.30.70.330 EMBL:AB077822 KO:K14411
EMBL:AC082643 HSSP:Q61474 EMBL:AY054536 EMBL:AY064643
IPI:IPI00548887 PIR:F96618 RefSeq:NP_176143.1 UniGene:At.17236
ProteinModelPortal:Q9C652 SMR:Q9C652 IntAct:Q9C652 STRING:Q9C652
PRIDE:Q9C652 EnsemblPlants:AT1G58470.1 GeneID:842216
KEGG:ath:AT1G58470 TAIR:At1g58470 InParanoid:Q9C652 OMA:VTYDSED
PhylomeDB:Q9C652 ProtClustDB:CLSN2914680 Genevestigator:Q9C652
Uniprot:Q9C652
Length = 360
Score = 210 (79.0 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
+K+F+GGL TT+E +++FE++G DVVVM D +T R RGFGF+TY V+ M
Sbjct: 120 KKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQ 179
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANA 105
+ H + + VE KRA+P++ I NA
Sbjct: 180 SNFHELSDKRVEVKRAIPKEGIQSNNGNA 208
Score = 143 (55.4 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 26/81 (32%), Positives = 54/81 (66%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+GG+ T++E+L+ +F ++G +++ VV K+ +T + RGFGF+ ++ V A+ +
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 78 RPHNIDGRVVETKRAVPRDEI 98
H I G+ V+ ++A+ + E+
Sbjct: 67 T-HFILGKPVDVRKAIRKHEL 86
Score = 124 (48.7 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 97 EIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 155
E+ + KK+FVGGL E++ + YF +FG V ++ + T RGF F+ +
Sbjct: 109 EMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTY 168
Query: 156 NDYDVVDKIVLSKITLLLDRRVE 178
+ D V+ ++ S L D+RVE
Sbjct: 169 DSEDSVEVVMQSNFHELSDKRVE 191
Score = 124 (48.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 109 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF-NDYDVV 161
K+FVGG+ K+ E+ L++YFS++G + + K TG RGF F+ F ND DVV
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVV 61
>UNIPROTKB|F1SHL4 [details] [associations]
symbol:F1SHL4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
EMBL:CU468866 Ensembl:ENSSSCT00000002164 OMA:QYGTIVE Uniprot:F1SHL4
Length = 280
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 55/172 (31%), Positives = 95/172 (55%)
Query: 8 SKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSE 67
SK E E K+F+G L + + L+ +F ++GE++D + DP T RSRGFGF+ +
Sbjct: 65 SKNVEEEG--KMFVGDLSWSNRKKDLKNYFTKFGEVIDCTIKMDPNTGRSRGFGFVLIKD 122
Query: 68 AKMVDDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREYF 127
A V+ + + H ++G V++ ++A K N VKK+FVG L + + R+ F
Sbjct: 123 AASVEKILDQKEHRLNGDVIDPEKA-------KVMKNDPVKKIFVG-LNPEATEKNRD-F 173
Query: 128 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV-VDKIVLSKITLLLDRRVE 178
+FG IE++ + + ++ +RGF FI F + + V K++ K + R+ E
Sbjct: 174 GEFGEIEAIELPMDPKSNKRRGFVFITFKEEEEPVKKVLEKKFHTISGRKCE 225
Score = 118 (46.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/93 (30%), Positives = 53/93 (56%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+ +K + + ++K+F+G L+ T+++ F ++GEI + + DP + + RGF FIT+
Sbjct: 145 EKAKVMKNDPVKKIFVG-LNPEATEKNRD--FGEFGEIEAIELPMDPKSNKRRGFVFITF 201
Query: 66 SEAKM-VDDAMSNRPHNIDGRVVETKRAVPRDE 97
E + V + + H I GR E K A P+++
Sbjct: 202 KEEEEPVKKVLEKKFHTISGRKCEIKVAQPKED 234
>TAIR|locus:2115169 [details] [associations]
symbol:AT4G36960 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 KO:K14411
HSSP:Q14103 UniGene:At.4642 UniGene:At.4643 EMBL:AY048286
EMBL:BT000573 IPI:IPI00527793 RefSeq:NP_001154290.1
RefSeq:NP_568011.1 ProteinModelPortal:Q94AC3 SMR:Q94AC3
IntAct:Q94AC3 PaxDb:Q94AC3 PRIDE:Q94AC3 EnsemblPlants:AT4G36960.1
EnsemblPlants:AT4G36960.2 GeneID:829850 KEGG:ath:AT4G36960
TAIR:At4g36960 HOGENOM:HOG000070627 InParanoid:Q94AC3 OMA:EITDLYM
PhylomeDB:Q94AC3 ProtClustDB:CLSN2689792 Genevestigator:Q94AC3
Uniprot:Q94AC3
Length = 379
Score = 220 (82.5 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 49/165 (29%), Positives = 90/165 (54%)
Query: 17 RKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMS 76
RK+ + G+ + + L+ + ++G++ D +VMKD T RSRGFG++T++ A+ +A+
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALK 62
Query: 77 NRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 135
H + R++E K A P++E+ +P T ++FV + E D R +F ++G I
Sbjct: 63 GE-HFLGNRILEVKVATPKEEMRQPAKKVT--RIFVARIPSSVSESDFRSHFERYGEITD 119
Query: 136 VNMVTNKETGAKRGFAFIEFNDYDVVDKIV-----LSKITLLLDR 175
+ M + + RG FI F+ D V+ ++ L T+ +DR
Sbjct: 120 LYMPKDYNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDR 164
Score = 153 (58.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K+F+G L + + L+ +F ++G I D + KDP RGFGF+T++E V D ++
Sbjct: 241 KIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAE-NGVADRVAR 299
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANAT 106
R H I G+ V A P DE G P A A+
Sbjct: 300 RSHEICGQEVAIDSATPLDEAG-PSAGAS 327
Score = 148 (57.2 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 28/88 (31%), Positives = 52/88 (59%)
Query: 14 ESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDD 73
+ + ++F+ + ++ ++ FE++GEI D+ + KD +K+ RG GFIT+S A V+D
Sbjct: 88 KKVTRIFVARIPSSVSESDFRSHFERYGEITDLYMPKDYNSKQHRGIGFITFSSADSVED 147
Query: 74 AMSNRPHNIDGRVVETKRAVPRDEIGKP 101
M + H++ G V RA P+++ P
Sbjct: 148 LMEDT-HDLGGTTVAVDRATPKEDDHPP 174
Score = 115 (45.5 bits), Expect = 8.7e-20, Sum P(2) = 8.7e-20
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 99 GKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 157
G+P K+FVG L + DDLR+YF +FG I+ + + + RGF F+ F +
Sbjct: 231 GEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAE 290
Query: 158 YDVVDKI 164
V D++
Sbjct: 291 NGVADRV 297
>UNIPROTKB|J9PBP6 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AAEX03014735
Ensembl:ENSCAFT00000045257 OMA:LAQTRHE Uniprot:J9PBP6
Length = 471
Score = 237 (88.5 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 52/143 (36%), Positives = 84/143 (58%)
Query: 31 ESLQAFFEQWGEIVDVVVMKDPITKRSR--GFGFITYSEAKMVDDAMSNRPHNIDGRVVE 88
E L+ +F Q+GE+ + +VM+DP+TKRSR GFGF+T+ + VD ++ H +D + V+
Sbjct: 121 EGLREYFGQFGEVKECLVMRDPLTKRSRCRGFGFVTFMDQAGVDKVLAQSRHELDSKTVQ 180
Query: 89 T--KRAVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE--SVNMVTNKE 143
K A PR K + KK+FVGGL + +D+++YF QF ++ ++ +K
Sbjct: 181 IDPKVAFPRRAQPKVQMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKVQVDDAMLMFDKT 240
Query: 144 TGAKRG--FAFIEFNDYDVVDKI 164
T RG F F+ F D+V+K+
Sbjct: 241 TNRHRGVGFGFVTFESEDIVEKV 263
Score = 145 (56.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 3 PRYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIV--DVVVMKDPITKRSRG- 59
PR K +K+F+GGL TT E ++ +FEQ+ ++ D ++M D T R RG
Sbjct: 188 PRRAQPKVQMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKVQVDDAMLMFDKTTNRHRGV 247
Query: 60 -FGFITYSEAKMVDDAMSNRPHNIDGRVV--ETKRAVPRDEIGKPEANA 105
FGF+T+ +V+ H I+ ++V E K+A P+ E+ P +A
Sbjct: 248 GFGFVTFESEDIVEKVCEIHFHEINNKMVQVECKKAQPK-EVMSPTGSA 295
>TAIR|locus:2122009 [details] [associations]
symbol:RBP31 "AT4G24770" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA;TAS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0045087 "innate
immune response" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
evidence=IDA] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0009631 "cold acclimation" evidence=IMP] [GO:0016553 "base
conversion or substitution editing" evidence=IMP] [GO:0043489 "RNA
stabilization" evidence=IMP] [GO:0006396 "RNA processing"
evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0008266 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 GO:GO:0009631
GO:GO:0016553 GO:GO:0006396 GO:GO:0030529 EMBL:AL035356
EMBL:AL161562 GO:GO:0009535 eggNOG:COG0724 HOGENOM:HOG000276232
EMBL:M94554 EMBL:X65255 EMBL:U08467 EMBL:D31712 EMBL:D31713
IPI:IPI00523699 IPI:IPI00542634 IPI:IPI00760320 PIR:S28057
PIR:S53492 RefSeq:NP_194208.1 UniGene:At.38112 UniGene:At.70990
ProteinModelPortal:Q04836 SMR:Q04836 STRING:Q04836 PaxDb:Q04836
PRIDE:Q04836 ProMEX:Q04836 EnsemblPlants:AT4G24770.1 GeneID:828579
KEGG:ath:AT4G24770 GeneFarm:4009 TAIR:At4g24770 InParanoid:Q04836
OMA:NRYDLNG PhylomeDB:Q04836 ProtClustDB:CLSN2915857
Genevestigator:Q04836 GermOnline:AT4G24770 GO:GO:0043489
Uniprot:Q04836
Length = 329
Score = 216 (81.1 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 51/161 (31%), Positives = 87/161 (54%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWG--EIVDVVVMKDPITKRSRGFGFITYSEAK 69
EP K+F+G L Y ++L FEQ G EI +V+ ++ T +SRGFGF+T S
Sbjct: 145 EPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRE--TDQSRGFGFVTMSSVD 202
Query: 70 MVDDAMS--NRPHNIDGRVVETKRAVPRDEIGK--PEANATVKKMFVGGLK-DQEEDDLR 124
+ A+ NR ++++GR++ +A PR + P +++VG L D + L
Sbjct: 203 EAETAVEKFNR-YDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLE 261
Query: 125 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIV 165
+ FS+ G + +V ++ETG RGF F+ +D D +++ +
Sbjct: 262 QLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAI 302
Score = 123 (48.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
+V++G L + + L+ F + G++V+ V+ D T RSRGFGF+T S+ +++A+S
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 78 RP-HNIDGRVVETKRAVPR 95
N++GR + A R
Sbjct: 305 LDGQNLEGRAIRVNVAEER 323
>UNIPROTKB|D6RBQ9 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 EMBL:AC124016 HGNC:HGNC:5036 ChiTaRS:HNRNPD
InterPro:IPR012956 Pfam:PF08143 IPI:IPI00963980
ProteinModelPortal:D6RBQ9 SMR:D6RBQ9 Ensembl:ENST00000503822
ArrayExpress:D6RBQ9 Bgee:D6RBQ9 Uniprot:D6RBQ9
Length = 155
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 40/89 (44%), Positives = 60/89 (67%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
+ D SK E E K+FIGGL + TT + L+ +F ++GE+VD + DPIT RSRGFGF+
Sbjct: 67 KIDASKNEEDEG--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 124
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRA 92
+ E++ VD M + H ++G+V++ KRA
Sbjct: 125 LFKESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 109 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIVLS 167
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK++
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 168 K 168
K
Sbjct: 139 K 139
>TAIR|locus:2157702 [details] [associations]
symbol:CP31B "chloroplast RNA-binding protein 31B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009451 "RNA modification"
evidence=IMP] [GO:0000023 "maltose metabolic process" evidence=RCA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0008266 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AB024031
eggNOG:COG0724 GO:GO:0009451 HOGENOM:HOG000276232 HSSP:P11940
ProtClustDB:CLSN2915857 UniGene:At.46085 UniGene:At.7917
EMBL:AY039868 EMBL:AY077660 IPI:IPI00537317 RefSeq:NP_199836.1
ProteinModelPortal:Q9FGS0 SMR:Q9FGS0 STRING:Q9FGS0 PaxDb:Q9FGS0
PRIDE:Q9FGS0 EnsemblPlants:AT5G50250.1 GeneID:835090
KEGG:ath:AT5G50250 TAIR:At5g50250 InParanoid:Q9FGS0 OMA:AAFRIYV
PhylomeDB:Q9FGS0 Genevestigator:Q9FGS0 Uniprot:Q9FGS0
Length = 289
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 52/159 (32%), Positives = 84/159 (52%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWG--EIVDVVVMKDPITKRSRGFGFITYSEAK 69
EP K+F+G L Y ++L FEQ G EI +V+ +D T +SRGFGF+T S +
Sbjct: 108 EPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRD--TDQSRGFGFVTMSTVE 165
Query: 70 MVDDAMSN-RPHNIDGRVVETKRAVPRDEIGKPEANATVK----KMFVGGLK-DQEEDDL 123
+ A+ ++GR + RA PR +PE V +++VG L D + L
Sbjct: 166 EAEKAVEKFNSFEVNGRRLTVNRAAPRGS--RPERQPRVYDAAFRIYVGNLPWDVDSGRL 223
Query: 124 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 162
FS+ G + +V+++ETG RGF F++ ++ + V+
Sbjct: 224 ERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVN 262
Score = 115 (45.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
++++G L + L+ F + G++VD V+ D T RSRGFGF+ S V+ A++
Sbjct: 208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAA 267
Query: 78 RP-HNIDGRVVETKRAVPR 95
N++GR ++ A R
Sbjct: 268 LDGQNLEGRAIKVNVAEER 286
>GENEDB_PFALCIPARUM|PFD0700c [details] [associations]
symbol:PFD0700c "RNA binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016070 EMBL:AL844503
HSSP:Q14103 RefSeq:XP_001351452.1 ProteinModelPortal:Q8I1U3
EnsemblProtists:PFD0700c:mRNA GeneID:812564 KEGG:pfa:PFD0700c
EuPathDB:PlasmoDB:PF3D7_0414500 HOGENOM:HOG000282694
ProtClustDB:CLSZ2431852 Uniprot:Q8I1U3
Length = 358
Score = 210 (79.0 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 53/162 (32%), Positives = 90/162 (55%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K FIGG+ T + + +FEQ+G + VV+ +D TKR+RGF F+T + + + + +
Sbjct: 115 KFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQDHETKRNRGFAFVTMA-SHINKERILR 173
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
H ++G+ V+ R+E ++ +K+FVGGL +D L YFS FG I+ V
Sbjct: 174 DTHELNGKRVDV-----REENNTTPSDIQ-RKIFVGGLNYYWTKDTLESYFSTFGEIDVV 227
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+V + +G R F F+ F++ + V K++ K + D+ VE
Sbjct: 228 QIVLDS-SGRSRCFGFVVFSNENSVAKVLKHKRHKIYDKMVE 268
Score = 155 (59.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 31/90 (34%), Positives = 56/90 (62%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+++ T + RK+F+GGL+Y T ++L+++F +GEI DVV + + RSR FGF+ +
Sbjct: 187 EENNTTPSDIQRKIFVGGLNYYWTKDTLESYFSTFGEI-DVVQIVLDSSGRSRCFGFVVF 245
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
S V + ++ H I ++VE ++A P+
Sbjct: 246 SNENSVAKVLKHKRHKIYDKMVEVRKAEPK 275
>UNIPROTKB|Q8I1U3 [details] [associations]
symbol:PFD0700c "RNA binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016070 "RNA
metabolic process" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016070
EMBL:AL844503 HSSP:Q14103 RefSeq:XP_001351452.1
ProteinModelPortal:Q8I1U3 EnsemblProtists:PFD0700c:mRNA
GeneID:812564 KEGG:pfa:PFD0700c EuPathDB:PlasmoDB:PF3D7_0414500
HOGENOM:HOG000282694 ProtClustDB:CLSZ2431852 Uniprot:Q8I1U3
Length = 358
Score = 210 (79.0 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 53/162 (32%), Positives = 90/162 (55%)
Query: 18 KVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSN 77
K FIGG+ T + + +FEQ+G + VV+ +D TKR+RGF F+T + + + + +
Sbjct: 115 KFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQDHETKRNRGFAFVTMA-SHINKERILR 173
Query: 78 RPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESV 136
H ++G+ V+ R+E ++ +K+FVGGL +D L YFS FG I+ V
Sbjct: 174 DTHELNGKRVDV-----REENNTTPSDIQ-RKIFVGGLNYYWTKDTLESYFSTFGEIDVV 227
Query: 137 NMVTNKETGAKRGFAFIEFNDYDVVDKIVLSKITLLLDRRVE 178
+V + +G R F F+ F++ + V K++ K + D+ VE
Sbjct: 228 QIVLDS-SGRSRCFGFVVFSNENSVAKVLKHKRHKIYDKMVE 268
Score = 155 (59.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 31/90 (34%), Positives = 56/90 (62%)
Query: 6 DDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITY 65
+++ T + RK+F+GGL+Y T ++L+++F +GEI DVV + + RSR FGF+ +
Sbjct: 187 EENNTTPSDIQRKIFVGGLNYYWTKDTLESYFSTFGEI-DVVQIVLDSSGRSRCFGFVVF 245
Query: 66 SEAKMVDDAMSNRPHNIDGRVVETKRAVPR 95
S V + ++ H I ++VE ++A P+
Sbjct: 246 SNENSVAKVLKHKRHKIYDKMVEVRKAEPK 275
>RGD|1563684 [details] [associations]
symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=ISO]
[GO:0017091 "AU-rich element binding" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0032496 "response to
lipopolysaccharide" evidence=ISO] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
REFSEQ:XM_003752953 Ncbi:XP_003753001
Length = 226
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 92 AVPRDEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGF 150
AV R++ +P A+A VKK+FVGGLK D E DL E+FSQFG +E ++ +K++G KRGF
Sbjct: 1 AVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGF 60
Query: 151 AFIEFNDYDVVDKIVLSKITLLLDRRVE 178
F+ F +D DK + K + RVE
Sbjct: 61 GFVYFQSHDAADKAAVVKFHPIQGHRVE 88
Score = 135 (52.6 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 4 RYDDSKCTEPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFI 63
R D ++ ++K+F+GGL + L F Q+G + ++ D + + RGFGF+
Sbjct: 4 REDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFV 63
Query: 64 TYSEAKMVDDAMSNRPHNIDGRVVETKRAVPRDEI 98
+ D A + H I G VE K+AVP+++I
Sbjct: 64 YFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKEDI 98
>FB|FBgn0036496 [details] [associations]
symbol:CG7804 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:AE014296 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 HSSP:P09651 eggNOG:NOG145464
GeneTree:ENSGT00570000079202 EMBL:AY118452 RefSeq:NP_648764.1
UniGene:Dm.13628 SMR:Q9VUN2 EnsemblMetazoa:FBtr0075617
EnsemblMetazoa:FBtr0332815 GeneID:39665 KEGG:dme:Dmel_CG7804
UCSC:CG7804-RA FlyBase:FBgn0036496 InParanoid:Q9VUN2 OMA:EPKHNNS
OrthoDB:EOG43XSK6 GenomeRNAi:39665 NextBio:814765 Uniprot:Q9VUN2
Length = 318
Score = 206 (77.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 54/144 (37%), Positives = 80/144 (55%)
Query: 23 GLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNI 82
GL Y TT++ L+ +FE +G++V + KD + S+GFGF+ + + +S R H+I
Sbjct: 113 GLSYNTTEQDLREYFETYGDVVKAEIKKDTRSGHSKGFGFVRFGSYDVQMHVLSKR-HSI 171
Query: 83 DGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTN 141
DGR E K R +G E K+FVG +D E DDLREYFS+FG E +++
Sbjct: 172 DGRWCEVKVPASRG-MGNQEPG----KVFVGRCTEDIEADDLREYFSKFG--EVIDVFIP 224
Query: 142 KETGAKRGFAFIEFNDYDVVDKIV 165
K R F+F+ F D V ++V
Sbjct: 225 KPF---RAFSFVTFLD-PYVPRVV 244
>UNIPROTKB|B1AKP7 [details] [associations]
symbol:TARDBP "TAR DNA-binding protein 43" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109811
HOGENOM:HOG000254792 HOVERGEN:HBG058671 UniGene:Hs.300624
HGNC:HGNC:11571 ChiTaRS:TARDBP IPI:IPI00639819 SMR:B1AKP7
Ensembl:ENST00000315091 Uniprot:B1AKP7
Length = 295
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 51/143 (35%), Positives = 83/143 (58%)
Query: 23 GLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNI 82
GL ++TT++ L+ +F +GE++ V V KD T S+GFGF+ ++E + MS R H I
Sbjct: 110 GLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR-HMI 168
Query: 83 DGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTN 141
DGR + K +P + + E + +K+FVG +D ED+LRE+FSQ+G + +++
Sbjct: 169 DGRWCDCK--LPNSKQSQDEPLRS-RKVFVGRCTEDMTEDELREFFSQYGDV--MDVFIP 223
Query: 142 KETGAKRGFAFIEFNDYDVVDKI 164
K R FAF+ F D + +
Sbjct: 224 KPF---RAFAFVTFADDQIAQSL 243
>UNIPROTKB|G3V162 [details] [associations]
symbol:TARDBP "TAR DNA-binding protein 43" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 EMBL:CH471130 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL109811 UniGene:Hs.300624 HGNC:HGNC:11571 ChiTaRS:TARDBP
ProteinModelPortal:G3V162 SMR:G3V162 PRIDE:G3V162
Ensembl:ENST00000473869 ArrayExpress:G3V162 Bgee:G3V162
Uniprot:G3V162
Length = 298
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 51/143 (35%), Positives = 83/143 (58%)
Query: 23 GLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMVDDAMSNRPHNI 82
GL ++TT++ L+ +F +GE++ V V KD T S+GFGF+ ++E + MS R H I
Sbjct: 110 GLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR-HMI 168
Query: 83 DGRVVETKRAVPRDEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTN 141
DGR + K +P + + E + +K+FVG +D ED+LRE+FSQ+G + +++
Sbjct: 169 DGRWCDCK--LPNSKQSQDEPLRS-RKVFVGRCTEDMTEDELREFFSQYGDV--MDVFIP 223
Query: 142 KETGAKRGFAFIEFNDYDVVDKI 164
K R FAF+ F D + +
Sbjct: 224 KPF---RAFAFVTFADDQIAQSL 243
>UNIPROTKB|F1M3M2 [details] [associations]
symbol:F1M3M2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00568624
Ensembl:ENSRNOT00000035537 Uniprot:F1M3M2
Length = 274
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 49/127 (38%), Positives = 73/127 (57%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FI ++TT ESL++ G++ + VM+D TK SRGFGF+TY+ V
Sbjct: 9 EPEQLLKLFIREPSFKTTGESLRSHLSN-GKLTNSAVMRDSNTKHSRGFGFVTYTVTMRV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREY-FSQF 130
D M+ RPH D + + V R + +P N TVKK+ VG +D +E + + F
Sbjct: 68 DADMNARPHK-DEELWNEREPVTRKDSQRPGVNLTVKKIIVGTGEDTKEHETSDITFHGH 126
Query: 131 GTI-ESV 136
G++ E+V
Sbjct: 127 GSVNETV 133
>UNIPROTKB|F1M8V9 [details] [associations]
symbol:F1M8V9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00781103
Ensembl:ENSRNOT00000055545 Uniprot:F1M8V9
Length = 236
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 49/127 (38%), Positives = 73/127 (57%)
Query: 12 EPESLRKVFIGGLDYRTTDESLQAFFEQWGEIVDVVVMKDPITKRSRGFGFITYSEAKMV 71
EPE L K+FI ++TT ESL++ G++ + VM+D TK SRGFGF+TY+ V
Sbjct: 9 EPEQLLKLFIREPSFKTTGESLRSHLSN-GKLTNSAVMRDSNTKHSRGFGFVTYTVTMRV 67
Query: 72 DDAMSNRPHNIDGRVVETKRAVPRDEIGKPEANATVKKMFVGGLKDQEEDDLREY-FSQF 130
D M+ RPH D + + V R + +P N TVKK+ VG +D +E + + F
Sbjct: 68 DADMNARPHK-DEELWNEREPVTRKDSQRPGVNLTVKKIIVGTGEDTKEHETSDITFHGH 126
Query: 131 GTI-ESV 136
G++ E+V
Sbjct: 127 GSVNETV 133
WARNING: HSPs involving 984 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 178 178 0.00086 109 3 11 22 0.43 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1234
No. of states in DFA: 579 (62 KB)
Total size of DFA: 144 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.24u 0.11s 17.35t Elapsed: 00:00:01
Total cpu time: 17.27u 0.11s 17.38t Elapsed: 00:00:01
Start: Thu Aug 15 14:22:52 2013 End: Thu Aug 15 14:22:53 2013
WARNINGS ISSUED: 2