BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2878
(181 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BMX|A Chain A, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|B Chain B, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|C Chain C, Mycobacterium Tuberculosis Ahpc
Length = 195
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 105/183 (57%), Gaps = 2/183 (1%)
Query: 1 MKTIGQSLSSYRVIGVKPG--FNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCP 58
+ TIG +Y++ + G + + F IT PGKW++ +F+PKDFTFVCP
Sbjct: 3 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCP 62
Query: 59 TEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118
TEI+ ++KL +F +R+A +LG S D+EF WR ++++L L SD L
Sbjct: 63 TEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPXLSDIKRELSQAA 122
Query: 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTGKLCACNRTLNG 178
G+ + GVA R TFI DP N IQ ++ +VGRN E LR+LDA+Q+ +LCA N
Sbjct: 123 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSDELCASNWRKGD 182
Query: 179 KTL 181
TL
Sbjct: 183 PTL 185
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 117 bits (293), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 8/172 (4%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
P FN FK + +S+ GKW + +FYP DFTFVCPTEI +++ VK+F++
Sbjct: 13 PDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCE 72
Query: 78 LLGGSSDNEFVKLAW---RRENSNLYKLNHWQFSDTNGSLIDQLGI-RHETGVALRATFI 133
+L S D+E+ LAW R+ L ++N +D ++ G+ + E GVA R FI
Sbjct: 73 VLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFI 132
Query: 134 FDPQNIIQHITVNNLNVGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181
DP+ ++ ITVN+L VGR+ E LR++ A Q G++C N KT+
Sbjct: 133 IDPKQNLRQITVNDLPVGRDVDEALRLVKAFQFVEKHGEVCPANWKPGDKTM 184
>pdb|2H01|A Chain A, Py00414- Plasmodium Yoelii Thioredoxin Peroxidase I
Length = 192
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 15 GVKPGFNLPEENNVSAFKVITESSFPGK-WKIFYFYPKDFTFVCPTEISEYNKLVKDFNE 73
G P F + F ++ S F GK + + YFYP DFTFVCP+EI +K + F E
Sbjct: 4 GQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE 63
Query: 74 RNAILLGGSSDNEFVKLAWRR---ENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRA 130
RN LLG S D++F LAW++ + + H SD + S+ + VALRA
Sbjct: 64 RNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRA 123
Query: 131 TFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT----GKLCACN 173
+ D Q ++QH+ VNNL +GR+ E LR++DA+Q G +C N
Sbjct: 124 FVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQHHEKYGDVCPAN 170
>pdb|3TUE|A Chain A, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|B Chain B, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|C Chain C, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|D Chain D, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|E Chain E, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
Length = 219
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 8/152 (5%)
Query: 30 AFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVK 89
+FK I+ SS+ GKW + +FYP DFTFVCPTE+ ++ V FNE N +L S D+E+
Sbjct: 45 SFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAH 104
Query: 90 LAWR---RENSNLYKLNHWQFSDTNGSLIDQLGIRHET-GVALRATFIFDPQNIIQHITV 145
L W R+ L + +D ++ G+ E+ GVA R FI DP +++ ITV
Sbjct: 105 LQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITV 164
Query: 146 NNLNVGRNPIETLRILDAIQ----TGKLCACN 173
N++ VGR+ E LR+L+A Q G++C N
Sbjct: 165 NDMPVGRSVEEVLRLLEAFQFVEKHGEVCPAN 196
>pdb|3SBC|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|E Chain E, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|F Chain F, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|G Chain G, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|H Chain H, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|I Chain I, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|J Chain J, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
Length = 216
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
F ++ + GK+ + F P FTFV PTEI +++ K F E+ A +L S+D+E+ L
Sbjct: 42 FDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLL 101
Query: 91 AWR---RENSNLYKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVN 146
AW R+ L +N +DTN SL G+ E GVALR FI DP+ +I+HIT+N
Sbjct: 102 AWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITIN 161
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181
+L VGRN E LR+++A Q G + CN T T+
Sbjct: 162 DLPVGRNVDEALRLVEAFQWTDKNGTVLPCNWTPGAATI 200
>pdb|2H66|A Chain A, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|B Chain B, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|C Chain C, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|D Chain D, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|E Chain E, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|F Chain F, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|G Chain G, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|H Chain H, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|I Chain I, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|J Chain J, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2I81|A Chain A, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|B Chain B, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|C Chain C, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|D Chain D, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|E Chain E, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
Length = 213
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
Query: 30 AFKVITESSFPGK-WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFV 88
+F + + F GK + + YFYP DFTFVCP+EI +K + F+ERN LLG S D+++
Sbjct: 40 SFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYT 99
Query: 89 KLAWRR---ENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITV 145
LAW++ + + H SD S+ + + V+LRA + D I+QH+ V
Sbjct: 100 HLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLV 159
Query: 146 NNLNVGRNPIETLRILDAIQT----GKLCACN 173
NNL +GR+ E LRI+DAIQ G +C N
Sbjct: 160 NNLAIGRSVDEILRIIDAIQHHEKYGDVCPAN 191
>pdb|3ZVJ|A Chain A, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|B Chain B, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|C Chain C, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|E Chain E, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|F Chain F, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|G Chain G, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|H Chain H, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|I Chain I, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|J Chain J, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|K Chain K, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|L Chain L, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|M Chain M, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|N Chain N, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|O Chain O, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|P Chain P, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|Q Chain Q, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|R Chain R, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|S Chain S, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|T Chain T, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK I + GK+ + +FYP DFTFVCPTEI ++ V++FN RN ++ S+D+++ L
Sbjct: 56 FKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHL 115
Query: 91 AWRRENSNLYKLNHWQ---FSDTNGSLIDQLGI-RHETGVALRATFIFDPQNIIQHITVN 146
AW + L H + +D + G+ E G A R FI DP I++ IT+N
Sbjct: 116 AWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITIN 175
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACN 173
+ VGR+ ETLR+LDA Q G++C N
Sbjct: 176 DKPVGRSVDETLRLLDAFQFVEKHGEVCPVN 206
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 89/159 (55%), Gaps = 8/159 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK I+ F GK+ + +FYP DFTFVCPTEI ++ +F++ N ++ S D+ F L
Sbjct: 46 FKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHL 105
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R+N L +N SD + G+ E G+ALR FI DP +I+H++VN
Sbjct: 106 AWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVN 165
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181
+L VGR+ ETLR++ A Q G++ N T T+
Sbjct: 166 DLPVGRSVEETLRLVKAFQFVEAHGEVSPANWTPESPTI 204
>pdb|3ZTL|A Chain A, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|B Chain B, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|C Chain C, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|D Chain D, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|E Chain E, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|F Chain F, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|G Chain G, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|H Chain H, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|I Chain I, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|J Chain J, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
Length = 222
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK I + GK+ + +FYP DFTFVCPTEI ++ V++FN RN ++ S+D+++ L
Sbjct: 59 FKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHL 118
Query: 91 AWRRENSNLYKLNHWQ---FSDTNGSLIDQLGI-RHETGVALRATFIFDPQNIIQHITVN 146
AW + L H + +D + G+ E G A R FI DP I++ IT+N
Sbjct: 119 AWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITIN 178
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACN 173
+ VGR+ ETLR+LDA Q G++C N
Sbjct: 179 DKPVGRSVDETLRLLDAFQFVEKHGEVCPVN 209
>pdb|3ZVJ|D Chain D, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK I + GK+ + +FYP DFTFVCPTEI ++ V++FN RN ++ S+D+++ L
Sbjct: 56 FKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHL 115
Query: 91 AWRRENSNLYKLNHWQ---FSDTNGSLIDQLGI-RHETGVALRATFIFDPQNIIQHITVN 146
AW + L H + +D + G+ E G A R FI DP I++ IT+N
Sbjct: 116 AWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITLN 175
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACN 173
+ VGR+ ETLR+LDA Q G++C N
Sbjct: 176 DKPVGRSVDETLRLLDAFQFVEKHGEVCPVN 206
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 13/166 (7%)
Query: 4 IGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISE 63
IG +++ V P FK I+ S + GK+ +F+FYP DFTFVCPTEI
Sbjct: 8 IGHPAPNFKATAVMPD---------GQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIA 58
Query: 64 YNKLVKDFNERNAILLGGSSDNEFVKLAW---RRENSNLYKLNHWQFSDTNGSLIDQLGI 120
++ ++F + N+ ++G S D+ F LAW ++ L +N SD ++ G+
Sbjct: 59 FSDRAEEFKKLNSQVIGASVDSHFEHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGV 118
Query: 121 -RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165
+ + G++ R FI D + I++ ITVN+L VGR+ ETLR++ A Q
Sbjct: 119 LKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQ 164
>pdb|1QQ2|A Chain A, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23.
pdb|1QQ2|B Chain B, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23
Length = 199
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 17/178 (9%)
Query: 4 IGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISE 63
IG S++ V P FK I+ S + GK+ +F+FYP DFTFVCPTEI
Sbjct: 8 IGHPAPSFKATAVMPD---------GQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIA 58
Query: 64 YNKLVKDFNERNAILLGGSSDNEFVKLAW---RRENSNLYKLNHWQFSDTNGSLIDQLGI 120
++ ++F + N ++G S D+ F LAW ++ L +N SD ++ G+
Sbjct: 59 FSDRAEEFKKLNCQVIGASVDSHFSHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGV 118
Query: 121 -RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ----TGKLCACN 173
+ + G++ R FI D + I++ IT+N+L VGR+ E LR++ A Q G++C
Sbjct: 119 LKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKHGEVCPAG 176
>pdb|1YF1|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|F Chain F, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|G Chain G, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|H Chain H, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|I Chain I, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|J Chain J, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
F +TE G+W +F+FYP DFTFVCPTE+ + ++ + + S+D FV
Sbjct: 20 FIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFVHK 79
Query: 91 AWRRENSNLYKLNHWQFSDTNGSLIDQLG-IRHETGVALRATFIFDPQNIIQHITVNNLN 149
AW + + K+ + D G+L +R + G+A RATF+ DPQ IIQ I V
Sbjct: 80 AWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEG 139
Query: 150 VGRNPIETLRILDAIQ-----TGKLC 170
+GR+ + LR + A Q G++C
Sbjct: 140 IGRDASDLLRKIKAAQYVAAHPGEVC 165
>pdb|1YF0|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
F +TE G+W +F+FYP DFTFVCPTE+ + ++ + + S+D F+
Sbjct: 20 FIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFIHK 79
Query: 91 AWRRENSNLYKLNHWQFSDTNGSLIDQLG-IRHETGVALRATFIFDPQNIIQHITVNNLN 149
AW + + K+ + D G+L +R + G+A RATF+ DPQ IIQ I V
Sbjct: 80 AWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEG 139
Query: 150 VGRNPIETLRILDAIQ-----TGKLC 170
+GR+ + LR + A Q G++C
Sbjct: 140 IGRDASDLLRKIKAAQYVAAHPGEVC 165
>pdb|2Z9S|A Chain A, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|B Chain B, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|C Chain C, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|D Chain D, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|E Chain E, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|F Chain F, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|G Chain G, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|H Chain H, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|I Chain I, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|J Chain J, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
Length = 199
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 4 IGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISE 63
IG S++ V P FK I+ S + GK+ +F+FYP DFTFV PTEI
Sbjct: 8 IGHPAPSFKATAVMPD---------GQFKDISLSDYKGKYVVFFFYPLDFTFVSPTEIIA 58
Query: 64 YNKLVKDFNERNAILLGGSSDNEFVKLAW---RRENSNLYKLNHWQFSDTNGSLIDQLGI 120
++ ++F + N ++G S D+ F LAW ++ L +N SD ++ G+
Sbjct: 59 FSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGV 118
Query: 121 -RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ----TGKLCACN 173
+ + G++ R FI D + I++ IT+N+L VGR+ E LR++ A Q G++C
Sbjct: 119 LKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKHGEVCPAG 176
>pdb|1YEP|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
F +TE G+W +F+FYP DFTFVCPTE+ + ++ + + S+D F
Sbjct: 20 FIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHK 79
Query: 91 AWRRENSNLYKLNHWQFSDTNGSLIDQLG-IRHETGVALRATFIFDPQNIIQHITVNNLN 149
AW + + K+ + D G+L +R + G+A RATF+ DPQ IIQ I V
Sbjct: 80 AWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEG 139
Query: 150 VGRNPIETLRILDAIQ-----TGKLC 170
+GR+ + LR + A Q G++C
Sbjct: 140 IGRDASDLLRKIKAAQYVAAHPGEVC 165
>pdb|3EMP|A Chain A, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|B Chain B, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|C Chain C, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|D Chain D, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|E Chain E, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
Length = 186
Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
F +TE G+W +F+FYP DFTFVCPTE+ + ++ + + S+D F
Sbjct: 20 FIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHK 79
Query: 91 AWRRENSNLYKLNHWQFSDTNGSLIDQLG-IRHETGVALRATFIFDPQNIIQHITVNNLN 149
AW + + K+ + D G+L +R + G+A RATF+ DPQ IIQ I V
Sbjct: 80 AWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEG 139
Query: 150 VGRNPIETLRILDAIQ 165
+GR+ + LR + A Q
Sbjct: 140 IGRDASDLLRKIKAAQ 155
>pdb|1QMV|A Chain A, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|B Chain B, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|C Chain C, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|D Chain D, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|E Chain E, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|F Chain F, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|G Chain G, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|H Chain H, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|I Chain I, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|J Chain J, Thioredoxin Peroxidase B From Red Blood Cells
Length = 197
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 85/153 (55%), Gaps = 8/153 (5%)
Query: 29 SAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFV 88
AFK + S + GK+ + +FYP DFTFV PTEI ++ +DF + +LG S D++F
Sbjct: 22 GAFKEVKLSDYKGKYVVLFFYPLDFTFVXPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFT 81
Query: 89 KLAW---RRENSNLYKLNHWQFSDTNGSLIDQLGI-RHETGVALRATFIFDPQNIIQHIT 144
LAW R+ L LN +D L + G+ + + G+A R FI D + +++ IT
Sbjct: 82 HLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQIT 141
Query: 145 VNNLNVGRNPIETLRILDAIQ----TGKLCACN 173
VN+L VGR+ E LR++ A Q G++C
Sbjct: 142 VNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAG 174
>pdb|2C0D|A Chain A, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
pdb|2C0D|B Chain B, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
Length = 221
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
Query: 37 SSFPG-KWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR- 94
SSF G K+ FYP ++TFVCPTEI E+NK +KDF +N LLG S D+ + LAW+
Sbjct: 51 SSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNM 110
Query: 95 --ENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGR 152
E + + SD N + + ++ ALR FI D ++H TVN+L +GR
Sbjct: 111 PIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGR 170
Query: 153 NPIETLRILDAI----QTGKLCACN 173
N E LR +D+I +G++C N
Sbjct: 171 NVQEVLRTIDSIIHVDTSGEVCPIN 195
>pdb|1YEX|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 100 bits (248), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
F +TE G+W +F+FYP DFTFVCPTE+ + ++ + + S+D F
Sbjct: 20 FIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFDHK 79
Query: 91 AWRRENSNLYKLNHWQFSDTNGSLIDQLG-IRHETGVALRATFIFDPQNIIQHITVNNLN 149
AW + + K+ + D G+L +R + G+A RATF+ DPQ IIQ I V
Sbjct: 80 AWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEG 139
Query: 150 VGRNPIETLRILDAIQ-----TGKLC 170
+GR+ + LR + A Q G++C
Sbjct: 140 IGRDASDLLRKIKAAQYVAAHPGEVC 165
>pdb|1E2Y|A Chain A, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|B Chain B, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|C Chain C, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|D Chain D, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|E Chain E, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|F Chain F, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|G Chain G, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|H Chain H, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|I Chain I, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|J Chain J, Tryparedoxin Peroxidase From Crithidia Fasciculata
Length = 188
Score = 99.4 bits (246), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 8/151 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK ++ SS+ GK+ + +FYP DFTFVCPTEI +++ K F E N ++ S D+E+ L
Sbjct: 26 FKKVSLSSYKGKYVVLFFYPXDFTFVCPTEIIQFSDDAKRFAEINTEVISCSCDSEYSHL 85
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
W R+ L +D ++ G+ E +GVA R FI DP ++ I +N
Sbjct: 86 QWTSVDRKKGGLGPXAIPXLADKTKAIARAYGVLDEDSGVAYRGVFIIDPNGKLRQIIIN 145
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACN 173
+ +GRN E +R+++A+Q G++C N
Sbjct: 146 DXPIGRNVEEVIRLVEALQFVEEHGEVCPAN 176
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 13/166 (7%)
Query: 4 IGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISE 63
IG +++ V P FK I+ S + GK+ +F+FYP DFTFV PTEI
Sbjct: 8 IGHPAPNFKATAVMPD---------GQFKDISLSDYKGKYVVFFFYPLDFTFVDPTEIIA 58
Query: 64 YNKLVKDFNERNAILLGGSSDNEFVKLAW---RRENSNLYKLNHWQFSDTNGSLIDQLGI 120
++ ++F + N+ ++G S D+ F L W ++ L +N SD ++ G+
Sbjct: 59 FSDRAEEFKKLNSQVIGASVDSHFEHLEWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGV 118
Query: 121 -RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165
+ + G++ R FI D + I++ ITVN+L VGR+ ETLR++ A Q
Sbjct: 119 LKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQ 164
>pdb|1ZOF|A Chain A, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|B Chain B, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|C Chain C, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|D Chain D, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|E Chain E, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|F Chain F, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|G Chain G, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|H Chain H, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|I Chain I, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|J Chain J, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
Length = 198
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR---ENSNLYK 101
I +F+PKDFTFVCPTEI ++K VKDF+E+ ++G S D+E V AW+ E + +
Sbjct: 37 ILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQ 96
Query: 102 LNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRIL 161
++ +D S+ + E +ALR F+ D ++H +N+L +GRN E LR++
Sbjct: 97 VSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMV 156
Query: 162 DAI----QTGKLC 170
DA+ + G++C
Sbjct: 157 DALLHFEEHGEVC 169
>pdb|1N8J|A Chain A, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|B Chain B, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|C Chain C, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|D Chain D, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|E Chain E, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|F Chain F, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|G Chain G, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|H Chain H, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|I Chain I, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|J Chain J, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|K Chain K, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|L Chain L, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|M Chain M, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|N Chain N, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|O Chain O, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|P Chain P, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|Q Chain Q, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|R Chain R, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|S Chain S, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|T Chain T, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
Length = 186
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
F +TE G+W +F+FYP DFTFV PTE+ + ++ + + S+D F
Sbjct: 20 FIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHK 79
Query: 91 AWRRENSNLYKLNHWQFSDTNGSLIDQLG-IRHETGVALRATFIFDPQNIIQHITVNNLN 149
AW + + K+ + D G+L +R + G+A RATF+ DPQ IIQ I V
Sbjct: 80 AWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEG 139
Query: 150 VGRNPIETLRILDAIQ-----TGKLCACN 173
+GR+ + LR + A Q G++C
Sbjct: 140 IGRDASDLLRKIKAAQYVAAHPGEVCPAK 168
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 96.3 bits (238), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK + S + GK+ +F+FYP DFTFVCPTEI ++ V +F N ++ S D++F L
Sbjct: 67 FKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHL 126
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R+ L + SD + G+ E G LR FI D + +++ IT+N
Sbjct: 127 AWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMN 186
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACN 173
+L VGR+ ETLR++ A Q G++C
Sbjct: 187 DLPVGRSVDETLRLVQAFQYTDKHGEVCPAG 217
>pdb|3TJF|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJG|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
Length = 254
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK + + + GK+ +F+FYP DFTFVCPTEI + +++F N ++ S D++F L
Sbjct: 81 FKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 140
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R L + SD + G+ E +G LR FI D + I++ IT+N
Sbjct: 141 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 200
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181
+L VGR+ ETLR++ A Q G++C +T+
Sbjct: 201 DLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 239
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK + + + GK+ +F+FYP DFTFVCPTEI + +++F N ++ S D++F L
Sbjct: 81 FKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 140
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R L + SD + G+ E +G LR FI D + I++ IT+N
Sbjct: 141 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 200
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181
+L VGR+ ETLR++ A Q G++C +T+
Sbjct: 201 DLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 239
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK + + + GK+ +F+FYP DFTFVCPTEI + +++F N ++ S D++F L
Sbjct: 38 FKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 97
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R L + SD + G+ E +G LR FI D + I++ IT+N
Sbjct: 98 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 157
Query: 147 NLNVGRNPIETLRILDAIQT----GKLCACNRTLNGKTL 181
+L VGR+ ETLR++ A Q G++C +T+
Sbjct: 158 DLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 196
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK + + + GK+ +F+FYP DFTFVCPTEI + +++F N ++ S D++F L
Sbjct: 73 FKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 132
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R L + SD + G+ E +G LR FI D + I++ IT+N
Sbjct: 133 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 192
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181
+L VGR+ ETLR++ A Q G++C +T+
Sbjct: 193 DLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 231
>pdb|1WE0|A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|B Chain B, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|C Chain C, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|D Chain D, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|E Chain E, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|F Chain F, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|G Chain G, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|H Chain H, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|I Chain I, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|J Chain J, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
Length = 187
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWR 93
+TE+ GKW I FYP DF+FVCPTE+ + K + + + S+D FV AW
Sbjct: 24 VTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWH 83
Query: 94 RENSNLYKLNHWQFSDTNGSLIDQLGI-RHETGVALRATFIFDPQNIIQHITVNNLNVGR 152
+ + + + D + ++ Q + ETG+A R TFI DP +IQ I +N +GR
Sbjct: 84 ENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGR 143
Query: 153 NPIETLRILDAIQ-----TGKLCACNRTLNGKTL 181
+ + + A Q G++C G+TL
Sbjct: 144 DASTLINKVKAAQYVRENPGEVCPAKWEEGGETL 177
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK + + + GK+ +F+FYP DFTFVCPTEI + +++F N ++ S D++F L
Sbjct: 73 FKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFEHL 132
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R L + SD + G+ E +G LR FI D + I++ IT+N
Sbjct: 133 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 192
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181
+L VGR+ ETLR++ A Q G++C +T+
Sbjct: 193 DLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 231
>pdb|3TJK|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
Length = 254
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK + + + GK+ +F+FYP DFTFVCPTEI + +++F N ++ S D++F L
Sbjct: 81 FKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 140
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R L + SD + G+ E +G LR FI D + I++ IT+N
Sbjct: 141 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 200
Query: 147 NLNVGRNPIETLRILDAIQ 165
+L VGR+ ETLR++ A Q
Sbjct: 201 DLPVGRSVDETLRLVQAFQ 219
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK + + + GK+ +F+FYP DFTFV PTEI + +++F N ++ S D++F L
Sbjct: 73 FKELKLTDYRGKYLVFFFYPLDFTFVXPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 132
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R L + SD + G+ E +G LR FI D + I++ IT+N
Sbjct: 133 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 192
Query: 147 NLNVGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181
+L VGR+ ETLR++ A Q G++C +T+
Sbjct: 193 DLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETI 231
>pdb|3TJJ|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
Length = 254
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Query: 31 FKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKL 90
FK + + + GK+ +F+FYP DFTFV PTEI + +++F N ++ S D++F L
Sbjct: 81 FKELKLTDYRGKYLVFFFYPLDFTFVXPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 140
Query: 91 AW---RRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDPQNIIQHITVN 146
AW R L + SD + G+ E +G LR FI D + I++ IT+N
Sbjct: 141 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 200
Query: 147 NLNVGRNPIETLRILDAIQ 165
+L VGR+ ETLR++ A Q
Sbjct: 201 DLPVGRSVDETLRLVQAFQ 219
>pdb|1XCC|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 43 WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKL 102
W I + +P DFT VC TE++E K+ +DF + N L+G S +++ W + KL
Sbjct: 33 WAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKL 92
Query: 103 NHWQF---SDTNGSLIDQLGIRHE-----TGVAL--RATFIFDPQNIIQHITVNNLNVGR 152
N W+ D + L ++L I E TG+ L R F P+ I+ + GR
Sbjct: 93 NKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGR 152
Query: 153 NPIETLRILDAIQ 165
N E LR+L ++Q
Sbjct: 153 NAHEILRVLKSLQ 165
>pdb|2E2G|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
Length = 250
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR--ENSN 98
GKW + + +P DFT VC TE + + +DF L+G S D+ F + W+ E
Sbjct: 34 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHI 93
Query: 99 LYKLNHWQFSDTNGSLIDQLGIRHETGV--ALRATFIFDPQNIIQHITVNNLNVGRNPIE 156
++ +D G++ +LG+ H +R FI D + +I+ + + +GR E
Sbjct: 94 GVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDE 153
Query: 157 TLRILDAIQTG 167
LRI+ A++ G
Sbjct: 154 ILRIVKALKLG 164
>pdb|3A5W|A Chain A, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|B Chain B, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|C Chain C, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|D Chain D, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|E Chain E, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|F Chain F, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|G Chain G, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|H Chain H, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|I Chain I, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|J Chain J, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
Length = 249
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR--ENSN 98
GKW + + +P DFT VC TE + + +DF L+G S D+ F + W+ E
Sbjct: 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHI 92
Query: 99 LYKLNHWQFSDTNGSLIDQLGIRHETGV--ALRATFIFDPQNIIQHITVNNLNVGRNPIE 156
++ +D G++ +LG+ H +R FI D + +I+ + + +GR E
Sbjct: 93 GVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDE 152
Query: 157 TLRILDAIQTG 167
LRI+ A++ G
Sbjct: 153 ILRIVKALKLG 163
>pdb|3A2V|A Chain A, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|B Chain B, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|C Chain C, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|D Chain D, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|E Chain E, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|F Chain F, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|G Chain G, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|H Chain H, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|I Chain I, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|J Chain J, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
Length = 249
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR--ENSN 98
GKW + + +P DFT VC TE + + +DF L+G S D+ F + W+ E
Sbjct: 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHI 92
Query: 99 LYKLNHWQFSDTNGSLIDQLGIRHETGV--ALRATFIFDPQNIIQHITVNNLNVGRNPIE 156
++ +D G++ +LG+ H +R FI D + +I+ + + +GR E
Sbjct: 93 GVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDE 152
Query: 157 TLRILDAIQTG 167
LRI+ A++ G
Sbjct: 153 ILRIVKALKLG 163
>pdb|1X0R|A Chain A, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|B Chain B, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|C Chain C, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|D Chain D, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|E Chain E, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|F Chain F, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|G Chain G, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|H Chain H, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|I Chain I, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|J Chain J, Thioredoxin Peroxidase From Aeropyrum Pernix K1
Length = 249
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR--ENSN 98
GKW + + +P DFT VC TE + + +DF L+G S D+ F + W+ E
Sbjct: 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHI 92
Query: 99 LYKLNHWQFSDTNGSLIDQLGIRHETGV--ALRATFIFDPQNIIQHITVNNLNVGRNPIE 156
++ +D G++ +LG+ H +R FI D + +I+ +GR E
Sbjct: 93 GVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTXLYYPXELGRLVDE 152
Query: 157 TLRILDAIQTG 167
LRI+ A++ G
Sbjct: 153 ILRIVKALKLG 163
>pdb|3A2W|A Chain A, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|B Chain B, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|C Chain C, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|D Chain D, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|E Chain E, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|F Chain F, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|G Chain G, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|H Chain H, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|I Chain I, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|J Chain J, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2X|A Chain A, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|B Chain B, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|C Chain C, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|D Chain D, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|E Chain E, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|F Chain F, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|G Chain G, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|H Chain H, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|I Chain I, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|J Chain J, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
Length = 249
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR--ENSN 98
GKW + + +P DFT V TE + + +DF L+G S D+ F + W+ E
Sbjct: 33 GKWFVLFSHPADFTPVSTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHI 92
Query: 99 LYKLNHWQFSDTNGSLIDQLGIRHETGV--ALRATFIFDPQNIIQHITVNNLNVGRNPIE 156
++ +D G++ +LG+ H +R FI D + +I+ + + +GR E
Sbjct: 93 GVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDE 152
Query: 157 TLRILDAIQTG 167
LRI+ A++ G
Sbjct: 153 ILRIVKALKLG 163
>pdb|3TB2|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 43 WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKL 102
W I + +P DFT V TE++E K+ +DF + N L+G S +++ W + KL
Sbjct: 33 WAILFSHPNDFTPVXTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKL 92
Query: 103 NHWQF---SDTNGSLIDQLGIRHE-----TGVAL--RATFIFDPQNIIQHITVNNLNVGR 152
N W+ D + L ++L I E TG+ L R F P+ I+ + GR
Sbjct: 93 NKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGR 152
Query: 153 NPIETLRILDAIQ 165
N E LR+L ++Q
Sbjct: 153 NAHEILRVLKSLQ 165
>pdb|2E2M|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2NVL|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
Length = 250
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR--ENSN 98
GKW + + +P DFT V TE + + +DF L+G S D+ F + W+ E
Sbjct: 34 GKWFVLFSHPADFTPVXTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHI 93
Query: 99 LYKLNHWQFSDTNGSLIDQLGIRHETGV--ALRATFIFDPQNIIQHITVNNLNVGRNPIE 156
++ +D G++ +LG+ H +R FI D + +I+ + + +GR E
Sbjct: 94 GVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDE 153
Query: 157 TLRILDAIQTG 167
LRI+ A++ G
Sbjct: 154 ILRIVKALKLG 164
>pdb|2ZCT|A Chain A, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|B Chain B, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|C Chain C, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|D Chain D, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|E Chain E, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|F Chain F, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|G Chain G, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|H Chain H, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|I Chain I, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|J Chain J, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
Length = 249
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR--ENSN 98
GKW + + +P DFT V TE + + +DF L+G S D+ F + W+ E
Sbjct: 33 GKWFVLFSHPADFTPVXTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHI 92
Query: 99 LYKLNHWQFSDTNGSLIDQLGIRHETGV--ALRATFIFDPQNIIQHITVNNLNVGRNPIE 156
++ +D G++ +LG+ H +R FI D + +I+ + + +GR E
Sbjct: 93 GVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDE 152
Query: 157 TLRILDAIQTG 167
LRI+ A++ G
Sbjct: 153 ILRIVKALKLG 163
>pdb|2CV4|A Chain A, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|B Chain B, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|C Chain C, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|D Chain D, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|E Chain E, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|F Chain F, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|G Chain G, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|H Chain H, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|I Chain I, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|J Chain J, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
Length = 250
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR--ENSN 98
GKW + + +P DFT V TE + + +DF L+G S D+ F + W+ E
Sbjct: 34 GKWFVLFSHPADFTPVXTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHI 93
Query: 99 LYKLNHWQFSDTNGSLIDQLGIRHETGV--ALRATFIFDPQNIIQHITVNNLNVGRNPIE 156
++ +D G++ +LG+ H +R FI D + +I+ +GR E
Sbjct: 94 GVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTXLYYPXELGRLVDE 153
Query: 157 TLRILDAIQTG 167
LRI+ A++ G
Sbjct: 154 ILRIVKALKLG 164
>pdb|2YWN|A Chain A, Crystal Structure Of Peroxiredoxin-Like Protein From
Sulfolobus Tokodaii
pdb|4G2E|A Chain A, Crystal Structure Of A Dimeric Prxq From Sulfolobus
Tokodaii
Length = 157
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
P F LP+ + K + S+ GK + FYP FT VC E+ + + FN+ NA+
Sbjct: 11 PDFELPD----TELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAV 66
Query: 78 LLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETG------VALRAT 131
+LG S D F A++ N KLN SD N ++ + + E +A RA
Sbjct: 67 VLGISVDPPFSNKAFKEHN----KLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAV 122
Query: 132 FIFDPQNIIQHITVNNLNVGRNPIETLR 159
F+ D + +++ V++ P + +
Sbjct: 123 FVIDKEGKVRYKWVSDDPTKEPPYDEIE 150
>pdb|3HJP|A Chain A, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|B Chain B, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|C Chain C, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|D Chain D, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
Length = 164
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLA 91
KV S F GK + FYP FT V E+S + + FNE NA+++G S D F A
Sbjct: 20 KVKIPSDFKGKVVVLAFYPAAFTSVSTKEMSTFRDSMAKFNEVNAVVIGISVDPPFSNKA 79
Query: 92 WRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGV------ALRATFIFDPQNIIQH 142
++ +N K+N SD N + G+ E + A R+ F+ D I+++
Sbjct: 80 FKEQN----KINFTIVSDFNREAVKAYGVAGELPILKGYVLAKRSVFVIDKNGIVRY 132
>pdb|2V2G|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V32|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V41|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|E Chain E, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|F Chain F, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|G Chain G, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|H Chain H, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
Length = 233
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 43 WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLY-- 100
W + + +P+DFT V TE+ +L DF +R L+ S DN W + L
Sbjct: 31 WGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGV 90
Query: 101 --KLNHWQFSDTNGSLIDQLGI-----RHETGVAL--RATFIFDPQNIIQHITVNNLNVG 151
+ + +D L +LG+ R TG+ L RA FI P ++ + G
Sbjct: 91 KGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTG 150
Query: 152 RNPIETLRILDAIQ 165
RN E LR++D++Q
Sbjct: 151 RNFSEILRVIDSLQ 164
>pdb|1PRX|A Chain A, Horf6 A Novel Human Peroxidase Enzyme
pdb|1PRX|B Chain B, Horf6 A Novel Human Peroxidase Enzyme
Length = 224
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 43 WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLY-- 100
W I + +P+DFT V TE+ KL +F +RN L+ S D+ LAW + + N Y
Sbjct: 33 WGILFSHPRDFTPVXTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSK-DINAYNS 91
Query: 101 -----KLNHWQFSDTNGSLIDQLGI-----RHETG--VALRATFIFDPQNIIQHITVNNL 148
KL D N L LG+ + E G V R F+F P ++ +
Sbjct: 92 EEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPA 151
Query: 149 NVGRNPIETLRILDAIQ 165
GRN E LR++ ++Q
Sbjct: 152 TTGRNFDEILRVVISLQ 168
>pdb|3GKK|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 20 FNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79
F+LP ++S T + G W + YFYPKD T C TE ++N L+ +F++ A +L
Sbjct: 16 FDLPL--SLSGGTQTTLRAHAGHWLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKIL 73
Query: 80 GGSSDN 85
G S D+
Sbjct: 74 GVSRDS 79
>pdb|4GQC|A Chain A, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|B Chain B, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|C Chain C, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|D Chain D, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
Length = 164
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 18 PGFNLPEEN--NVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERN 75
P F LP ++ V+ ++V+ G+ + F+P F+ VC E+ + + + N
Sbjct: 12 PDFTLPNQDFEPVNLYEVLKR----GRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKAN 67
Query: 76 AILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-----TGVALRA 130
A +L S D+ + ++ EN + L SD N +I + HE VA RA
Sbjct: 68 AEVLAISVDSPWCLKKFKDENRLAFNL----LSDYNREVIKLYNVYHEDLKGLKMVAKRA 123
Query: 131 TFIFDPQNIIQH--ITVNNLN 149
FI P + + +T N LN
Sbjct: 124 VFIVKPDGTVAYKWVTDNPLN 144
>pdb|2CX3|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX4|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|E Chain E, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|F Chain F, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|G Chain G, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|H Chain H, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|4GQF|A Chain A, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
pdb|4GQF|B Chain B, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
Length = 164
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 18 PGFNLPEEN--NVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERN 75
P F LP ++ V+ ++V+ G+ + F+P F+ VC E+ + + N
Sbjct: 12 PDFTLPNQDFEPVNLYEVLKR----GRPAVLIFFPAAFSPVCTKELCTFRDKXAQLEKAN 67
Query: 76 AILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-----TGVALRA 130
A +L S D+ + ++ EN + L SD N +I + HE VA RA
Sbjct: 68 AEVLAISVDSPWCLKKFKDENRLAFNL----LSDYNREVIKLYNVYHEDLKGLKXVAKRA 123
Query: 131 TFIFDPQNIIQH--ITVNNLN 149
FI P + + +T N LN
Sbjct: 124 VFIVKPDGTVAYKWVTDNPLN 144
>pdb|3DRN|A Chain A, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
pdb|3DRN|B Chain B, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
Length = 161
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 34 ITESSFPGKWKI-FYFYPKDFTFVCPTEISEYNK---LVKDFNERNAILLGGSSDNEFVK 89
I+ S + GK I YFYPKD T E S + L+KD++ +++G SSD+
Sbjct: 21 ISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYD---VVVIGVSSDD---- 73
Query: 90 LAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVAL--RATFIFDPQNIIQHITVNN 147
+ + YKL SD + + + G + G L R TF+ D + II+HI +
Sbjct: 74 INSHKRFKEKYKLPFILVSDPDKKIRELYGAK---GFILPARITFVIDKKGIIRHIYNSQ 130
Query: 148 LNVGRNPIETLRILDAIQTGKLC 170
+N + E L+ L I+ ++
Sbjct: 131 MNPANHVNEALKALKQIKEEEIS 153
>pdb|3IXR|A Chain A, Crystal Structure Of Xylella Fastidiosa Prxq C47s Mutant
Length = 179
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 35 TESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85
T S + +W + YFYPKD T TE E+N L+ F + NA +LG S D+
Sbjct: 45 TLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDS 95
>pdb|3GKN|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
pdb|3GKN|B Chain B, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
Length = 163
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 20 FNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79
F+LP ++S T + G W + YFYPKD T TE ++N L+ +F++ A +L
Sbjct: 16 FDLPL--SLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKIL 73
Query: 80 GGSSDN 85
G S D+
Sbjct: 74 GVSRDS 79
>pdb|3GKM|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 20 FNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79
F+LP ++S T + G W + YFYPKD T TE ++N L+ +F++ A +L
Sbjct: 16 FDLPL--SLSGGTQTTLRAHAGHWLVIYFYPKDSTPGSTTEGLDFNALLPEFDKAGAKIL 73
Query: 80 GGSSDN 85
G S D+
Sbjct: 74 GVSRDS 79
>pdb|2XPD|A Chain A, Reduced Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|2XPD|B Chain B, Reduced Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|2XPD|C Chain C, Reduced Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|2XPD|D Chain D, Reduced Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|2XPD|E Chain E, Reduced Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|2XPD|F Chain F, Reduced Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|2XPE|A Chain A, Oxidised Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|2XPE|B Chain B, Oxidised Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|3ZRD|A Chain A, Oxidised Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|3ZRD|B Chain B, Oxidised Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
pdb|3ZRE|A Chain A, Reduced Thiol Peroxidase (Tpx) From Yersinia
Pseudotuberculosis
Length = 200
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFV--KLA 91
+ SSF GK K+ +P T VC + ++N+L + N ++L SSD F +
Sbjct: 71 VALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRFC 128
Query: 92 WRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQ-NIIQHITVNNLNV 150
SN+ L+ + +D + + G+ RA + D Q N+I VN +
Sbjct: 129 GAEGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITT 188
Query: 151 GRN 153
N
Sbjct: 189 EPN 191
>pdb|1XXU|A Chain A, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|B Chain B, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|C Chain C, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|D Chain D, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
Length = 153
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 12/133 (9%)
Query: 13 VIGVKPGFNLPEENNVSAFKVITESSFPG-KWKIFYFYPKDFTFVCPTEISEYNKLVKDF 71
V P F L ++N +++T + G K + F+P FT +C E+ + + +F
Sbjct: 4 VGATAPDFTLRDQNQ----QLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEF 59
Query: 72 NERNAILLGGSSDNEFVKLAWRRENSNLYKL--NHWQFSDTNGSLIDQLGIRHE-TGVAL 128
++ L S W ++ + L + W +G++ G+ +E G+A
Sbjct: 60 ENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFW----PHGAVSQAYGVFNEQAGIAN 115
Query: 129 RATFIFDPQNIIQ 141
R TF+ D II+
Sbjct: 116 RGTFVVDRSGIIR 128
>pdb|2YJH|A Chain A, Thiol Peroxidase From Yersinia Psuedotuberculosis,
Inactive Mutant C61s
Length = 200
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFV--KLA 91
+ SSF GK K+ +P T V + ++N+L + N ++L SSD F +
Sbjct: 71 VALSSFAGKRKVLNIFPSIDTGVSAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRFC 128
Query: 92 WRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQ-NIIQHITVNNLNV 150
SN+ L+ + +D + + G+ RA + D Q N+I VN +
Sbjct: 129 GAEGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITT 188
Query: 151 GRN 153
N
Sbjct: 189 EPN 191
>pdb|3HVX|A Chain A, Escherichia Coli Thiol Peroxidase (Tpx) Resolving Cysteine
To Serine Mutant (C95s) With An Intermolecular Disulfide
Bond
pdb|3HVX|B Chain B, Escherichia Coli Thiol Peroxidase (Tpx) Resolving Cysteine
To Serine Mutant (C95s) With An Intermolecular Disulfide
Bond
pdb|3HVX|C Chain C, Escherichia Coli Thiol Peroxidase (Tpx) Resolving Cysteine
To Serine Mutant (C95s) With An Intermolecular Disulfide
Bond
pdb|3HVX|D Chain D, Escherichia Coli Thiol Peroxidase (Tpx) Resolving Cysteine
To Serine Mutant (C95s) With An Intermolecular Disulfide
Bond
Length = 167
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFV--KLA 91
+T F GK K+ +P T VC + ++N+L + + N ++L S+D F + +
Sbjct: 37 VTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEID--NTVVLSISADLPFAQSRFS 94
Query: 92 WRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE----TGVALRATFIFD 135
+N+ L+ ++ N + G+ G+A RA + D
Sbjct: 95 GAEGLNNVITLSTFR----NAEFLQAYGVAIADGPLKGLAARAVVVID 138
>pdb|1QXH|A Chain A, Crystal Structure Of Escherichia Coli Thiol Peroxidase In
The Oxidized State
pdb|1QXH|B Chain B, Crystal Structure Of Escherichia Coli Thiol Peroxidase In
The Oxidized State
pdb|3HVS|A Chain A, Escherichia Coli Thiol Peroxidase (Tpx) Wild Type
Disulfide Form
pdb|3HVS|B Chain B, Escherichia Coli Thiol Peroxidase (Tpx) Wild Type
Disulfide Form
pdb|3I43|A Chain A, Escherichia Coli Thiol Peroxidase (Tpx) Wild Type
Disulfide Form
pdb|3I43|B Chain B, Escherichia Coli Thiol Peroxidase (Tpx) Wild Type
Disulfide Form
Length = 167
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 12/108 (11%)
Query: 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFV--KLA 91
+T F GK K+ +P T VC + ++N+L + + N ++L S+D F +
Sbjct: 37 VTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEID--NTVVLCISADLPFAQSRFC 94
Query: 92 WRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE----TGVALRATFIFD 135
+N+ L+ ++ N + G+ G+A RA + D
Sbjct: 95 GAEGLNNVITLSTFR----NAEFLQAYGVAIADGPLKGLAARAVVVID 138
>pdb|1PSQ|A Chain A, Structure Of A Probable Thiol Peroxidase From
Streptococcus Pneumoniae
pdb|1PSQ|B Chain B, Structure Of A Probable Thiol Peroxidase From
Streptococcus Pneumoniae
Length = 163
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 37 SSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96
+ F GK K+ P T +C T+ +N+ + + N ++L S D F + W
Sbjct: 38 ADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGLD--NTVVLTVSXDLPFAQKRWCGAE 95
Query: 97 --SNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHIT-VNNLN 149
N L+ + F + G D + +E + RA F+ D N I+++ V+N+N
Sbjct: 96 GLDNAIXLSDY-FDHSFGR--DYALLINEWHLLARAVFVLDTDNTIRYVEYVDNIN 148
>pdb|1XVW|A Chain A, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
pdb|1XVW|B Chain B, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
Length = 160
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Query: 13 VIGVKPGFNLPEENNVSAFKVITESSFPG-KWKIFYFYPKDFTFVCPTEISEYNKLVKDF 71
V P F L ++N +++T + G K + F+P FT + E+ + + +F
Sbjct: 11 VGATAPDFTLRDQNQ----QLVTLRGYRGAKNVLLVFFPLAFTGIXQGELDQLRDHLPEF 66
Query: 72 NERNAILLGGSSDNEFVKLAWRRENSNLYKL--NHWQFSDTNGSLIDQLGIRHE-TGVAL 128
++ L S W ++ + L + W +G++ G+ +E G+A
Sbjct: 67 ENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFW----PHGAVSQAYGVFNEQAGIAN 122
Query: 129 RATFIFDPQNIIQ 141
R TF+ D II+
Sbjct: 123 RGTFVVDRSGIIR 135
>pdb|4EO3|A Chain A, Peroxiredoxin Nitroreductase Fusion Enzyme
pdb|4EO3|B Chain B, Peroxiredoxin Nitroreductase Fusion Enzyme
Length = 322
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLA 91
K T GK+ I +F+PK T E E+++ N A ++G S D+ V+
Sbjct: 15 KTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDS--VEAL 68
Query: 92 WRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFD 135
R + N K+ SD G L + + E G +R+TF+ D
Sbjct: 69 KRFKEKNDLKVT--LLSDPEGILHEFFNVL-ENGKTVRSTFLID 109
>pdb|3HVV|A Chain A, Escherichia Coli Thiol Peroxidase (Tpx) Peroxidatic
Cysteine To Serine Mutant (C61s)
Length = 167
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVK 89
+T F GK K+ +P T V + ++N+L + + N ++L S+D F +
Sbjct: 37 VTLGQFAGKRKVLNIFPSIDTGVSAASVRKFNQLATEID--NTVVLCISADLPFAQ 90
>pdb|3AMR|A Chain A, Crystal Structures Of Bacillus Subtilis Alkaline Phytase
In Complex With Ca2+, Co2+, Ni2+, Mg2+ And Myo-Inositol
Hexasulfate
pdb|3AMS|A Chain A, Crystal Structures Of Bacillus Subtilis Alkaline Phytase
In Complex With Ca2+, Cd2+, Co2+, Ni2+, Mg2+ And
Myo-Inositol Hexasulfate
Length = 355
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 66 KLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHET 124
K V+ F + N+ G ++D+E+ +L E+ ++K + +NG++ID+ RH T
Sbjct: 171 KKVRAF-KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLT 228
>pdb|2PMZ|A Chain A, Archaeal Rna Polymerase From Sulfolobus Solfataricus
pdb|2PMZ|Q Chain Q, Archaeal Rna Polymerase From Sulfolobus Solfataricus
pdb|3HKZ|A Chain A, The X-Ray Crystal Structure Of Rna Polymerase From Archaea
pdb|3HKZ|I Chain I, The X-Ray Crystal Structure Of Rna Polymerase From Archaea
Length = 880
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFN--------ERNAILLGGSSDNEFVKL 90
+ GK I F PKDF F +S +L K+ + +N ILL G D + +
Sbjct: 546 YTGKQVISAFLPKDFNFHGQANVSSGPRLCKNEDCPHDSYVVIKNGILLEGVFDKKAIG- 604
Query: 91 AWRRENSNLYKLNHW---QFSDTNGS-LIDQL 118
N + HW ++SD G L+D L
Sbjct: 605 -----NQQPESILHWLIKEYSDEYGKWLMDNL 631
>pdb|4AF2|A Chain A, C61s Mutant Of Thiol Peroxidase Form E. Coli
Length = 201
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFV--KLA 91
+T F GK K+ +P T V + ++N+L + + N ++L S+D F +
Sbjct: 71 VTLGQFAGKRKVLNIFPSIDTGVSAASVRKFNQLATEID--NTVVLCISADLPFAQSRFC 128
Query: 92 WRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE----TGVALRATFIFD 135
+N+ L+ ++ N + G+ G+A RA + D
Sbjct: 129 GAEGLNNVITLSTFR----NAEFLQAYGVAIADGPLKGLAARAVVVID 172
>pdb|2WAQ|A Chain A, The Complete Structure Of The Archaeal 13-Subunit Dna-
Directed Rna Polymerase
pdb|2WB1|A Chain A, The Complete Structure Of The Archaeal 13-Subunit Dna-
Directed Rna Polymerase
pdb|2WB1|W Chain W, The Complete Structure Of The Archaeal 13-Subunit Dna-
Directed Rna Polymerase
pdb|2Y0S|A Chain A, Crystal Structure Of Sulfolobus Shibatae Rna Polymerase In
P21 Space Group
pdb|2Y0S|W Chain W, Crystal Structure Of Sulfolobus Shibatae Rna Polymerase In
P21 Space Group
pdb|4AYB|A Chain A, Rnap At 3.2ang
pdb|4B1O|A Chain A, Archaeal Rnap-Dna Binary Complex At 4.32ang
pdb|4B1P|W Chain W, Archaeal Rnap-Dna Binary Complex At 4.32ang
Length = 880
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
Query: 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFN--------ERNAILLGGSSDNEFVKL 90
+ GK + F PKDF F +S +L K+ + +N ILL G D + +
Sbjct: 546 YTGKQVVSAFLPKDFNFHGQANVSSGPRLCKNEDCPHDSYVVIKNGILLEGVFDKKAIG- 604
Query: 91 AWRRENSNLYKLNHW---QFSDTNGS-LIDQL 118
N + HW ++SD G L+D L
Sbjct: 605 -----NQQPESILHWLIKEYSDEYGKWLMDNL 631
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,723,343
Number of Sequences: 62578
Number of extensions: 240486
Number of successful extensions: 810
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 703
Number of HSP's gapped (non-prelim): 74
length of query: 181
length of database: 14,973,337
effective HSP length: 93
effective length of query: 88
effective length of database: 9,153,583
effective search space: 805515304
effective search space used: 805515304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)