Query psy2878
Match_columns 181
No_of_seqs 134 out of 1439
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 19:11:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2878.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2878hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbc_A Peroxiredoxin TSA1; alp 100.0 3.7E-44 1.3E-48 271.6 18.1 170 2-181 23-200 (216)
2 3tue_A Tryparedoxin peroxidase 100.0 1.4E-43 4.9E-48 268.9 17.7 171 2-181 26-204 (219)
3 3tjj_A Peroxiredoxin-4; thiore 100.0 5.6E-40 1.9E-44 255.8 17.0 171 1-181 61-239 (254)
4 3qpm_A Peroxiredoxin; oxidored 100.0 2.1E-39 7.2E-44 250.7 17.6 170 2-181 48-225 (240)
5 1n8j_A AHPC, alkyl hydroperoxi 100.0 9.6E-39 3.3E-43 238.0 17.3 168 3-181 2-176 (186)
6 2pn8_A Peroxiredoxin-4; thiore 100.0 8.7E-39 3E-43 242.8 16.3 170 2-181 19-196 (211)
7 1zye_A Thioredoxin-dependent p 100.0 9.8E-38 3.3E-42 238.4 18.6 171 1-181 26-204 (220)
8 2i81_A 2-Cys peroxiredoxin; st 100.0 1.3E-37 4.4E-42 236.7 17.2 170 1-181 20-199 (213)
9 1uul_A Tryparedoxin peroxidase 100.0 1.8E-37 6E-42 233.7 17.6 170 1-181 5-184 (202)
10 1xcc_A 1-Cys peroxiredoxin; un 100.0 2.4E-38 8.3E-43 241.8 12.5 166 2-181 3-185 (220)
11 2v2g_A Peroxiredoxin 6; oxidor 100.0 2.3E-38 7.8E-43 243.8 12.4 166 2-181 3-184 (233)
12 2c0d_A Thioredoxin peroxidase 100.0 3.1E-37 1E-41 235.9 18.0 169 2-181 25-203 (221)
13 1qmv_A Human thioredoxin perox 100.0 1.7E-37 6E-42 232.8 16.4 170 1-181 4-182 (197)
14 1prx_A HORF6; peroxiredoxin, h 100.0 8.6E-38 3E-42 239.4 14.9 167 1-181 4-188 (224)
15 3ztl_A Thioredoxin peroxidase; 100.0 1.8E-37 6.1E-42 237.2 16.7 171 1-181 39-217 (222)
16 4g2e_A Peroxiredoxin; redox pr 100.0 6.7E-38 2.3E-42 227.5 13.4 147 1-164 3-156 (157)
17 1we0_A Alkyl hydroperoxide red 100.0 6E-37 2E-41 227.9 16.6 167 2-181 1-177 (187)
18 4gqc_A Thiol peroxidase, perox 100.0 4.5E-38 1.5E-42 230.2 7.5 148 1-165 4-159 (164)
19 3a2v_A Probable peroxiredoxin; 100.0 6.8E-37 2.3E-41 237.4 14.4 166 1-181 4-185 (249)
20 2h01_A 2-Cys peroxiredoxin; th 100.0 3.1E-36 1E-40 225.1 17.1 168 3-181 1-178 (192)
21 2bmx_A Alkyl hydroperoxidase C 100.0 1.3E-35 4.3E-40 222.3 19.2 178 2-181 4-185 (195)
22 1zof_A Alkyl hydroperoxide-red 100.0 1.1E-35 3.9E-40 223.0 16.6 167 2-181 1-180 (198)
23 3drn_A Peroxiredoxin, bacterio 100.0 9.2E-34 3.1E-38 206.0 14.7 149 1-167 1-150 (161)
24 3gkn_A Bacterioferritin comigr 100.0 1.2E-33 4.2E-38 205.2 14.9 147 2-166 7-162 (163)
25 3ixr_A Bacterioferritin comigr 100.0 7.6E-34 2.6E-38 210.2 13.3 148 1-166 20-178 (179)
26 3p7x_A Probable thiol peroxida 100.0 3.5E-33 1.2E-37 203.9 14.7 144 1-164 19-166 (166)
27 3mng_A Peroxiredoxin-5, mitoch 100.0 4.1E-33 1.4E-37 205.5 14.4 146 2-164 15-173 (173)
28 1psq_A Probable thiol peroxida 100.0 9.9E-33 3.4E-37 201.0 15.3 144 2-164 16-163 (163)
29 3zrd_A Thiol peroxidase; oxido 100.0 2E-32 6.7E-37 206.2 14.9 143 1-162 51-200 (200)
30 1xvw_A Hypothetical protein RV 100.0 2.6E-32 9E-37 197.4 14.7 148 1-165 8-159 (160)
31 1q98_A Thiol peroxidase, TPX; 100.0 2.3E-32 7.9E-37 199.5 14.3 141 2-161 17-164 (165)
32 3u5r_E Uncharacterized protein 100.0 3.9E-32 1.3E-36 206.9 15.6 156 1-179 31-210 (218)
33 3keb_A Probable thiol peroxida 100.0 1.6E-31 5.6E-36 203.6 17.0 143 1-165 21-175 (224)
34 2yzh_A Probable thiol peroxida 100.0 9.7E-32 3.3E-36 197.1 14.4 144 1-164 20-170 (171)
35 3uma_A Hypothetical peroxiredo 100.0 1.8E-31 6.2E-36 198.5 12.6 143 1-160 25-183 (184)
36 2wfc_A Peroxiredoxin 5, PRDX5; 100.0 3.3E-31 1.1E-35 194.2 13.5 144 1-161 2-159 (167)
37 1tp9_A Peroxiredoxin, PRX D (t 100.0 6.3E-31 2.2E-35 191.5 13.6 144 2-160 4-161 (162)
38 2cvb_A Probable thiol-disulfid 100.0 1.6E-30 5.5E-35 192.9 15.2 155 1-179 6-182 (188)
39 1nm3_A Protein HI0572; hybrid, 100.0 1.4E-30 4.9E-35 200.8 14.5 147 1-165 2-166 (241)
40 2ywi_A Hypothetical conserved 100.0 4.7E-30 1.6E-34 191.3 15.1 155 2-178 18-196 (196)
41 4f82_A Thioredoxin reductase; 100.0 2.6E-30 8.9E-35 190.2 13.2 152 1-161 9-174 (176)
42 1xvq_A Thiol peroxidase; thior 100.0 9.3E-30 3.2E-34 187.4 16.3 143 1-163 17-165 (175)
43 2a4v_A Peroxiredoxin DOT5; yea 100.0 7E-31 2.4E-35 190.2 9.7 144 1-165 6-157 (159)
44 1xiy_A Peroxiredoxin, pfaop; a 100.0 5.8E-30 2E-34 189.8 13.4 158 2-164 1-180 (182)
45 2jsy_A Probable thiol peroxida 100.0 3.4E-30 1.2E-34 187.8 11.8 145 2-165 18-166 (167)
46 4eo3_A Bacterioferritin comigr 100.0 5.2E-30 1.8E-34 205.7 13.0 138 6-166 2-139 (322)
47 2xhf_A Peroxiredoxin 5; oxidor 100.0 7.3E-30 2.5E-34 187.3 11.9 143 2-162 14-170 (171)
48 3gl3_A Putative thiol:disulfid 100.0 4.7E-28 1.6E-32 173.2 17.5 142 2-169 3-145 (152)
49 3kcm_A Thioredoxin family prot 100.0 1.7E-28 5.8E-33 175.9 15.1 142 1-167 1-144 (154)
50 2pwj_A Mitochondrial peroxired 100.0 7.9E-29 2.7E-33 182.1 12.9 147 4-160 9-170 (171)
51 3fw2_A Thiol-disulfide oxidore 100.0 6.1E-28 2.1E-32 172.8 15.8 134 1-164 4-146 (150)
52 1xzo_A BSSCO, hypothetical pro 100.0 1.2E-27 4.1E-32 174.8 17.1 145 2-166 7-172 (174)
53 3ewl_A Uncharacterized conserv 100.0 3.6E-28 1.2E-32 172.0 13.7 133 3-165 2-140 (142)
54 2lrn_A Thiol:disulfide interch 100.0 2E-27 6.8E-32 170.4 15.8 134 2-165 3-140 (152)
55 3eur_A Uncharacterized protein 100.0 1.1E-27 3.8E-32 169.9 13.1 131 2-162 5-141 (142)
56 3eyt_A Uncharacterized protein 100.0 1.2E-27 4.1E-32 172.3 13.3 136 4-166 2-152 (158)
57 3hcz_A Possible thiol-disulfid 100.0 2.4E-27 8.1E-32 168.3 14.4 136 2-164 5-144 (148)
58 2l5o_A Putative thioredoxin; s 99.9 6.4E-27 2.2E-31 167.4 15.8 140 1-167 1-142 (153)
59 2f9s_A Thiol-disulfide oxidore 99.9 9.9E-27 3.4E-31 166.4 16.0 139 3-168 1-140 (151)
60 4fo5_A Thioredoxin-like protei 99.9 1.1E-27 3.7E-32 170.2 10.7 131 2-163 7-142 (143)
61 3lor_A Thiol-disulfide isomera 99.9 3.1E-27 1.1E-31 170.3 12.7 137 3-166 4-155 (160)
62 3fkf_A Thiol-disulfide oxidore 99.9 1.6E-26 5.4E-31 164.0 15.6 134 2-165 5-145 (148)
63 3lwa_A Secreted thiol-disulfid 99.9 1.3E-26 4.4E-31 171.1 15.6 140 2-165 31-180 (183)
64 1jfu_A Thiol:disulfide interch 99.9 6.5E-27 2.2E-31 173.0 13.8 144 2-167 34-181 (186)
65 3hdc_A Thioredoxin family prot 99.9 2.6E-27 9E-32 171.0 11.3 139 1-166 14-152 (158)
66 2b7k_A SCO1 protein; metalloch 99.9 9.4E-27 3.2E-31 174.8 14.3 156 2-175 13-195 (200)
67 2obi_A PHGPX, GPX-4, phospholi 99.9 7.2E-27 2.5E-31 172.8 13.0 142 1-164 20-182 (183)
68 2v1m_A Glutathione peroxidase; 99.9 1.1E-26 3.9E-31 168.7 13.8 141 2-164 5-165 (169)
69 2p31_A CL683, glutathione pero 99.9 5.8E-27 2E-31 173.2 11.5 136 2-164 23-179 (181)
70 2lrt_A Uncharacterized protein 99.9 2.5E-26 8.4E-31 165.2 13.9 132 3-163 10-145 (152)
71 3me7_A Putative uncharacterize 99.9 2.3E-26 7.9E-31 168.6 13.6 144 2-166 1-162 (170)
72 2gs3_A PHGPX, GPX-4, phospholi 99.9 2.1E-26 7.2E-31 170.7 13.1 140 2-163 23-183 (185)
73 3or5_A Thiol:disulfide interch 99.9 8.6E-26 2.9E-30 163.3 15.6 142 2-166 8-151 (165)
74 2p5q_A Glutathione peroxidase 99.9 2.8E-26 9.5E-31 166.8 12.2 141 2-165 6-167 (170)
75 3dwv_A Glutathione peroxidase- 99.9 8.6E-27 2.9E-31 173.2 9.7 141 2-166 20-183 (187)
76 2vup_A Glutathione peroxidase- 99.9 2.6E-26 9E-31 170.9 12.2 137 2-165 22-184 (190)
77 2ggt_A SCO1 protein homolog, m 99.9 1.1E-25 3.7E-30 162.8 15.1 137 7-165 2-160 (164)
78 3ia1_A THIO-disulfide isomeras 99.9 6.6E-26 2.3E-30 162.4 13.1 137 2-169 5-147 (154)
79 3kh7_A Thiol:disulfide interch 99.9 5.6E-26 1.9E-30 167.2 12.6 121 2-147 30-152 (176)
80 2b5x_A YKUV protein, TRXY; thi 99.9 8.5E-26 2.9E-30 160.1 13.1 139 2-166 1-145 (148)
81 3erw_A Sporulation thiol-disul 99.9 1.3E-25 4.3E-30 158.7 13.9 132 2-161 9-144 (145)
82 3kij_A Probable glutathione pe 99.9 7.9E-26 2.7E-30 166.9 12.6 144 3-165 13-173 (180)
83 2lja_A Putative thiol-disulfid 99.9 2.8E-25 9.7E-30 158.6 14.8 140 1-167 2-144 (152)
84 3ha9_A Uncharacterized thiored 99.9 7.6E-26 2.6E-30 164.1 11.5 132 3-165 12-163 (165)
85 4hde_A SCO1/SENC family lipopr 99.9 8.3E-25 2.8E-29 160.4 17.0 146 3-165 7-169 (170)
86 2f8a_A Glutathione peroxidase 99.9 1E-25 3.5E-30 170.4 12.5 140 3-164 21-205 (208)
87 3raz_A Thioredoxin-related pro 99.9 1.1E-25 3.8E-30 161.1 11.8 125 25-167 12-141 (151)
88 2rli_A SCO2 protein homolog, m 99.9 1.3E-24 4.5E-29 158.2 17.3 135 9-165 7-163 (171)
89 2i3y_A Epididymal secretory gl 99.9 7.6E-25 2.6E-29 166.4 15.9 139 4-165 31-210 (215)
90 2hyx_A Protein DIPZ; thioredox 99.9 2E-25 6.9E-30 180.8 13.4 136 2-164 51-197 (352)
91 3cmi_A Peroxiredoxin HYR1; thi 99.9 5.6E-26 1.9E-30 166.2 8.7 132 5-164 9-166 (171)
92 2r37_A Glutathione peroxidase 99.9 9.1E-25 3.1E-29 165.1 14.1 139 4-165 13-192 (207)
93 4evm_A Thioredoxin family prot 99.9 1.3E-24 4.4E-29 151.6 13.5 130 7-164 1-137 (138)
94 2ls5_A Uncharacterized protein 99.9 3.6E-27 1.2E-31 170.2 0.0 140 2-164 7-149 (159)
95 1zzo_A RV1677; thioredoxin fol 99.9 3.6E-24 1.2E-28 149.4 15.0 132 4-165 1-134 (136)
96 1lu4_A Soluble secreted antige 99.9 2.8E-24 9.6E-29 150.3 14.2 132 6-164 2-134 (136)
97 2k6v_A Putative cytochrome C o 99.9 7.7E-25 2.6E-29 159.4 10.4 140 3-164 11-171 (172)
98 2b1k_A Thiol:disulfide interch 99.9 6.2E-24 2.1E-28 154.4 11.6 118 2-146 22-144 (168)
99 1i5g_A Tryparedoxin II; electr 99.9 9.7E-24 3.3E-28 149.7 8.4 120 4-145 3-127 (144)
100 2h30_A Thioredoxin, peptide me 99.9 1.7E-23 5.7E-28 151.2 9.6 125 24-166 25-156 (164)
101 1kng_A Thiol:disulfide interch 99.9 4.6E-23 1.6E-27 147.6 9.8 136 2-163 8-149 (156)
102 1o8x_A Tryparedoxin, TRYX, TXN 99.9 1.1E-22 3.7E-27 144.7 8.0 121 1-144 1-126 (146)
103 3s9f_A Tryparedoxin; thioredox 99.9 2.7E-23 9.1E-28 151.5 4.2 122 1-145 21-147 (165)
104 1o73_A Tryparedoxin; electron 99.9 1.4E-22 4.9E-27 143.4 7.5 121 1-144 1-126 (144)
105 2lus_A Thioredoxion; CR-Trp16, 99.8 2.3E-23 7.8E-28 147.1 0.0 117 6-145 2-126 (143)
106 4h86_A Peroxiredoxin type-2; o 99.7 1.7E-16 5.9E-21 117.6 13.2 156 2-160 26-198 (199)
107 2l57_A Uncharacterized protein 99.6 1E-15 3.5E-20 105.9 9.5 106 24-167 13-118 (126)
108 2fwh_A Thiol:disulfide interch 99.6 1.2E-16 4.2E-21 112.0 2.0 118 3-166 5-128 (134)
109 2ju5_A Thioredoxin disulfide i 99.6 1.2E-15 4.2E-20 109.5 4.2 111 32-165 38-151 (154)
110 3hxs_A Thioredoxin, TRXP; elec 99.5 2.3E-13 7.9E-18 95.5 12.0 101 24-165 38-138 (141)
111 3fk8_A Disulphide isomerase; A 99.4 5.2E-13 1.8E-17 92.9 9.7 103 34-165 22-132 (133)
112 3ul3_B Thioredoxin, thioredoxi 99.4 6.6E-13 2.3E-17 92.0 9.7 95 32-163 33-127 (128)
113 3f9u_A Putative exported cytoc 99.4 1.4E-15 4.9E-20 110.7 -5.0 122 33-164 39-164 (172)
114 2kuc_A Putative disulphide-iso 99.4 5.5E-13 1.9E-17 92.2 8.1 103 32-168 18-123 (130)
115 2voc_A Thioredoxin; electron t 99.4 8.1E-12 2.8E-16 84.4 11.7 90 40-166 16-105 (112)
116 2pu9_C TRX-F, thioredoxin F-ty 99.4 4E-12 1.4E-16 85.6 9.5 89 38-164 21-109 (111)
117 3p2a_A Thioredoxin 2, putative 99.3 5.9E-12 2E-16 89.2 9.0 97 32-165 46-142 (148)
118 3zzx_A Thioredoxin; oxidoreduc 99.3 1E-11 3.5E-16 83.5 8.6 89 37-164 16-104 (105)
119 3qfa_C Thioredoxin; protein-pr 99.3 4.7E-12 1.6E-16 86.3 6.8 87 39-164 29-115 (116)
120 2l5l_A Thioredoxin; structural 99.3 1.1E-11 3.8E-16 86.6 8.2 89 40-165 37-125 (136)
121 1thx_A Thioredoxin, thioredoxi 99.3 4.7E-11 1.6E-15 80.3 10.9 89 40-165 24-112 (115)
122 1faa_A Thioredoxin F; electron 99.3 1.8E-11 6.1E-16 83.9 8.9 89 39-165 35-123 (124)
123 2i4a_A Thioredoxin; acidophIle 99.3 3.9E-11 1.3E-15 79.7 10.3 88 40-164 19-106 (107)
124 3die_A Thioredoxin, TRX; elect 99.3 3.1E-11 1.1E-15 80.0 9.6 88 40-164 18-105 (106)
125 1nsw_A Thioredoxin, TRX; therm 99.3 2E-11 6.9E-16 81.0 8.4 88 40-164 16-103 (105)
126 3d6i_A Monothiol glutaredoxin- 99.3 4.6E-11 1.6E-15 80.3 10.2 88 40-164 20-107 (112)
127 1w4v_A Thioredoxin, mitochondr 99.3 3.5E-11 1.2E-15 82.1 9.6 88 40-164 30-117 (119)
128 1dby_A Chloroplast thioredoxin 99.3 5.5E-11 1.9E-15 79.1 10.3 88 40-164 18-105 (107)
129 1t00_A Thioredoxin, TRX; redox 99.3 3.3E-11 1.1E-15 81.0 9.2 88 40-164 22-109 (112)
130 1xfl_A Thioredoxin H1; AT3G510 99.3 3.4E-11 1.1E-15 83.0 9.3 86 40-164 37-122 (124)
131 3f3q_A Thioredoxin-1; His TAG, 99.3 3.5E-11 1.2E-15 81.0 9.0 87 39-164 22-108 (109)
132 3cxg_A Putative thioredoxin; m 99.2 7.5E-12 2.6E-16 87.4 5.6 93 35-166 34-129 (133)
133 3tco_A Thioredoxin (TRXA-1); d 99.2 5.6E-11 1.9E-15 79.1 9.6 88 40-164 20-107 (109)
134 2trx_A Thioredoxin; electron t 99.2 6.2E-11 2.1E-15 79.0 9.7 88 40-164 19-106 (108)
135 3d22_A TRXH4, thioredoxin H-ty 99.2 1.3E-11 4.5E-16 86.3 6.5 91 37-166 42-132 (139)
136 2j23_A Thioredoxin; immune pro 99.2 4.5E-11 1.5E-15 81.9 9.1 88 40-164 32-119 (121)
137 1ep7_A Thioredoxin CH1, H-type 99.2 5.4E-11 1.8E-15 79.8 9.1 87 41-165 24-110 (112)
138 1x5d_A Protein disulfide-isome 99.2 1.2E-10 4E-15 80.5 10.6 90 40-165 24-116 (133)
139 2dml_A Protein disulfide-isome 99.2 4.7E-11 1.6E-15 82.4 8.5 89 40-164 34-122 (130)
140 3hz4_A Thioredoxin; NYSGXRC, P 99.2 4E-11 1.4E-15 84.2 8.3 102 40-178 23-130 (140)
141 2e0q_A Thioredoxin; electron t 99.2 8.1E-11 2.8E-15 77.5 9.3 87 40-164 15-101 (104)
142 2o8v_B Thioredoxin 1; disulfid 99.2 4.6E-11 1.6E-15 82.8 8.2 88 40-164 39-126 (128)
143 1x5e_A Thioredoxin domain cont 99.2 7.4E-11 2.5E-15 81.1 9.2 96 43-175 24-120 (126)
144 2vlu_A Thioredoxin, thioredoxi 99.2 9E-11 3.1E-15 80.0 9.3 87 40-165 33-119 (122)
145 1z6n_A Hypothetical protein PA 99.2 6.4E-12 2.2E-16 91.5 3.7 80 35-144 48-127 (167)
146 4euy_A Uncharacterized protein 99.2 4.5E-11 1.5E-15 79.7 7.4 87 40-164 17-103 (105)
147 2dj1_A Protein disulfide-isome 99.2 2.4E-11 8.2E-16 84.9 6.1 91 40-167 33-125 (140)
148 2l6c_A Thioredoxin; oxidoreduc 99.2 9.5E-11 3.2E-15 78.9 8.8 89 40-166 18-106 (110)
149 3m9j_A Thioredoxin; oxidoreduc 99.2 8E-11 2.7E-15 78.0 8.1 89 37-164 16-104 (105)
150 2yzu_A Thioredoxin; redox prot 99.2 1.5E-10 5.3E-15 76.8 9.5 89 40-165 17-105 (109)
151 2ppt_A Thioredoxin-2; thiredox 99.2 1.7E-10 5.8E-15 82.7 10.2 89 40-165 63-151 (155)
152 1fb6_A Thioredoxin M; electron 99.2 1.3E-10 4.4E-15 76.8 8.9 88 40-164 17-104 (105)
153 1sen_A Thioredoxin-like protei 99.2 1.3E-12 4.3E-17 94.7 -1.2 104 33-165 38-147 (164)
154 3gix_A Thioredoxin-like protei 99.2 4.3E-11 1.5E-15 85.3 6.9 89 40-164 22-119 (149)
155 2oe3_A Thioredoxin-3; electron 99.2 1.2E-10 4E-15 79.1 8.8 85 40-163 29-113 (114)
156 3gnj_A Thioredoxin domain prot 99.2 1.8E-10 6.3E-15 76.9 9.5 88 40-164 21-108 (111)
157 2vim_A Thioredoxin, TRX; thior 99.2 1.5E-10 5E-15 76.5 8.9 89 37-164 15-103 (104)
158 2dj3_A Protein disulfide-isome 99.2 5E-11 1.7E-15 82.6 6.8 94 40-166 24-118 (133)
159 2lst_A Thioredoxin; structural 98.8 2.4E-12 8.3E-17 89.0 0.0 100 32-165 10-115 (130)
160 2xc2_A Thioredoxinn; oxidoredu 99.2 6.9E-11 2.4E-15 80.2 7.2 88 37-164 29-116 (117)
161 2wz9_A Glutaredoxin-3; protein 99.2 1.9E-10 6.7E-15 81.9 9.8 88 40-166 31-118 (153)
162 3qou_A Protein YBBN; thioredox 99.2 2E-10 6.8E-15 89.7 10.6 91 37-164 22-112 (287)
163 2vm1_A Thioredoxin, thioredoxi 99.2 1.9E-10 6.6E-15 77.7 9.1 88 40-166 27-114 (118)
164 2f51_A Thioredoxin; electron t 99.2 1.5E-10 5.1E-15 79.0 8.4 89 40-166 22-113 (118)
165 1xwb_A Thioredoxin; dimerizati 99.1 3.1E-10 1.1E-14 75.1 9.4 88 39-164 18-105 (106)
166 1gh2_A Thioredoxin-like protei 99.1 3.1E-10 1.1E-14 75.6 9.0 86 40-164 20-105 (107)
167 1r26_A Thioredoxin; redox-acti 99.1 2.7E-10 9.3E-15 78.6 8.8 87 40-165 36-122 (125)
168 1syr_A Thioredoxin; SGPP, stru 99.1 3.4E-10 1.2E-14 76.2 9.0 86 40-164 25-110 (112)
169 1ti3_A Thioredoxin H, PTTRXH1; 99.1 2.3E-10 7.8E-15 76.7 7.6 89 37-164 22-110 (113)
170 3emx_A Thioredoxin; structural 99.1 1.6E-10 5.6E-15 80.6 6.9 94 43-166 33-126 (135)
171 3dxb_A Thioredoxin N-terminall 99.1 5.2E-10 1.8E-14 84.6 9.8 91 40-167 29-119 (222)
172 2i1u_A Thioredoxin, TRX, MPT46 99.1 5E-10 1.7E-14 76.0 8.8 89 40-165 29-117 (121)
173 3aps_A DNAJ homolog subfamily 99.1 1.9E-10 6.4E-15 78.4 6.3 94 40-166 20-113 (122)
174 3apq_A DNAJ homolog subfamily 99.1 7.7E-11 2.6E-15 88.3 4.5 91 39-166 112-202 (210)
175 1zma_A Bacterocin transport ac 99.1 3.9E-10 1.3E-14 76.6 7.7 90 40-162 28-117 (118)
176 1v98_A Thioredoxin; oxidoreduc 99.1 9.6E-10 3.3E-14 76.9 9.9 89 41-166 50-138 (140)
177 2djj_A PDI, protein disulfide- 99.1 3.7E-10 1.3E-14 76.8 7.4 96 32-165 15-116 (121)
178 1oaz_A Thioredoxin 1; immune s 99.1 5.2E-10 1.8E-14 77.0 8.2 88 40-164 20-121 (123)
179 1mek_A Protein disulfide isome 99.1 2E-10 7E-15 77.5 6.0 91 40-166 23-117 (120)
180 1qgv_A Spliceosomal protein U5 99.1 6.9E-10 2.3E-14 78.4 8.7 93 40-165 22-120 (142)
181 3uvt_A Thioredoxin domain-cont 99.1 4.6E-10 1.6E-14 74.9 7.3 87 41-163 21-109 (111)
182 3h79_A Thioredoxin-like protei 99.0 1.3E-09 4.6E-14 74.9 9.3 90 40-164 32-126 (127)
183 1wou_A Thioredoxin -related pr 99.0 8.7E-10 3E-14 75.7 6.9 95 37-162 20-121 (123)
184 3idv_A Protein disulfide-isome 99.0 7.7E-10 2.6E-14 83.9 7.2 91 39-166 30-122 (241)
185 3ira_A Conserved protein; meth 99.0 1.4E-09 4.7E-14 79.5 8.2 108 32-164 30-145 (173)
186 2dj0_A Thioredoxin-related tra 99.0 4.8E-09 1.6E-13 73.1 10.1 81 39-146 24-105 (137)
187 2yj7_A LPBCA thioredoxin; oxid 98.5 5.4E-11 1.9E-15 78.6 0.0 73 40-145 18-90 (106)
188 1wmj_A Thioredoxin H-type; str 99.0 3.7E-10 1.3E-14 77.6 3.5 88 39-165 34-121 (130)
189 1nho_A Probable thioredoxin; b 98.9 5.9E-09 2E-13 66.2 8.3 80 44-164 4-83 (85)
190 3ph9_A Anterior gradient prote 98.9 3.6E-10 1.2E-14 80.8 2.7 96 37-164 40-143 (151)
191 1fo5_A Thioredoxin; disulfide 98.9 5.3E-09 1.8E-13 66.4 7.6 82 42-164 3-84 (85)
192 2qsi_A Putative hydrogenase ex 98.9 3.9E-09 1.4E-13 74.0 7.5 87 42-165 34-122 (137)
193 3t58_A Sulfhydryl oxidase 1; o 98.9 6.4E-09 2.2E-13 88.1 10.2 92 41-165 30-126 (519)
194 1a8l_A Protein disulfide oxido 98.9 2E-08 6.7E-13 75.5 11.7 88 41-164 134-224 (226)
195 2dbc_A PDCL2, unnamed protein 98.9 3.2E-09 1.1E-13 74.1 6.8 89 40-165 29-120 (135)
196 2av4_A Thioredoxin-like protei 98.9 7.3E-09 2.5E-13 74.1 8.4 69 41-142 41-109 (160)
197 2qgv_A Hydrogenase-1 operon pr 98.9 5E-09 1.7E-13 73.7 7.3 90 40-165 33-124 (140)
198 3q6o_A Sulfhydryl oxidase 1; p 98.9 9.9E-09 3.4E-13 78.4 8.7 91 40-165 29-126 (244)
199 2es7_A Q8ZP25_salty, putative 98.8 5E-09 1.7E-13 74.0 6.4 86 42-165 35-124 (142)
200 3iv4_A Putative oxidoreductase 98.8 1.8E-08 6.2E-13 68.1 8.0 75 41-146 24-99 (112)
201 2hls_A Protein disulfide oxido 98.8 4.8E-08 1.6E-12 74.9 10.5 88 38-165 135-225 (243)
202 3ed3_A Protein disulfide-isome 98.8 3.4E-08 1.1E-12 78.0 9.1 96 40-166 34-142 (298)
203 1a0r_P Phosducin, MEKA, PP33; 98.7 1.9E-08 6.4E-13 77.4 6.8 91 40-165 132-225 (245)
204 3idv_A Protein disulfide-isome 98.7 1.3E-07 4.4E-12 71.5 10.9 89 40-165 146-236 (241)
205 1ilo_A Conserved hypothetical 98.7 1.1E-07 3.6E-12 59.2 8.7 61 45-143 3-63 (77)
206 3kp8_A Vkorc1/thioredoxin doma 98.6 1.5E-09 5.3E-14 72.9 -1.7 89 32-162 3-91 (106)
207 3f8u_A Protein disulfide-isome 98.6 4.1E-08 1.4E-12 81.9 6.4 91 40-166 369-461 (481)
208 2r2j_A Thioredoxin domain-cont 98.6 2.6E-07 9E-12 75.1 10.5 91 40-166 21-117 (382)
209 1sji_A Calsequestrin 2, calseq 98.6 2.5E-07 8.6E-12 74.3 10.1 89 40-166 27-122 (350)
210 2trc_P Phosducin, MEKA, PP33; 98.6 8.6E-08 2.9E-12 72.4 6.1 90 40-164 119-211 (217)
211 2b5e_A Protein disulfide-isome 98.6 2.1E-07 7.2E-12 78.2 8.8 91 40-166 30-122 (504)
212 2ywm_A Glutaredoxin-like prote 98.5 4.7E-07 1.6E-11 68.1 9.0 83 41-164 136-218 (229)
213 3f8u_A Protein disulfide-isome 98.5 3.7E-07 1.3E-11 76.1 9.1 89 41-166 21-109 (481)
214 3gyk_A 27KDA outer membrane pr 98.5 1.7E-07 5.7E-12 67.8 5.5 51 32-83 13-63 (175)
215 3apo_A DNAJ homolog subfamily 98.5 4.7E-07 1.6E-11 79.8 9.4 93 36-166 450-542 (780)
216 2dlx_A UBX domain-containing p 98.5 1.2E-06 4.2E-11 62.5 9.6 91 40-165 41-135 (153)
217 3evi_A Phosducin-like protein 98.5 4.8E-07 1.6E-11 61.8 7.0 86 41-163 23-111 (118)
218 3apo_A DNAJ homolog subfamily 98.4 2.6E-07 8.9E-12 81.5 6.3 94 40-166 674-767 (780)
219 1eej_A Thiol:disulfide interch 98.4 2.1E-07 7.2E-12 70.0 4.2 44 34-82 79-122 (216)
220 3uem_A Protein disulfide-isome 98.4 3.9E-07 1.3E-11 73.2 5.4 89 40-165 266-356 (361)
221 3dml_A Putative uncharacterize 98.3 1.2E-07 4.1E-12 64.6 1.4 90 41-164 18-108 (116)
222 3qcp_A QSOX from trypanosoma b 98.3 3.9E-07 1.3E-11 76.0 4.6 67 41-138 42-115 (470)
223 2b5e_A Protein disulfide-isome 98.3 5.1E-07 1.7E-11 75.8 4.3 88 40-165 375-466 (504)
224 3ga4_A Dolichyl-diphosphooligo 98.2 1.1E-05 3.8E-10 58.9 10.2 92 41-164 37-151 (178)
225 3hd5_A Thiol:disulfide interch 98.2 3.3E-06 1.1E-10 62.0 6.3 43 40-84 24-66 (195)
226 3us3_A Calsequestrin-1; calciu 98.1 2.4E-05 8.1E-10 63.2 10.8 90 40-166 29-124 (367)
227 3h93_A Thiol:disulfide interch 98.1 6.3E-06 2.2E-10 60.3 5.7 42 40-83 24-65 (192)
228 1v58_A Thiol:disulfide interch 98.0 2.5E-05 8.5E-10 59.6 8.6 118 34-165 90-232 (241)
229 2djk_A PDI, protein disulfide- 98.0 3E-05 1E-09 53.4 7.5 97 41-171 23-120 (133)
230 2znm_A Thiol:disulfide interch 97.9 2.9E-05 9.8E-10 56.8 7.3 42 40-83 21-62 (195)
231 1a8l_A Protein disulfide oxido 97.9 4.1E-05 1.4E-09 57.1 8.2 70 39-140 20-90 (226)
232 2e7p_A Glutaredoxin; thioredox 97.8 6.7E-06 2.3E-10 55.1 2.4 70 40-144 18-87 (116)
233 1z6m_A Conserved hypothetical 97.7 0.00033 1.1E-08 50.2 9.9 50 33-83 19-69 (175)
234 2rem_A Disulfide oxidoreductas 97.7 8.2E-05 2.8E-09 54.2 6.6 42 40-83 24-65 (193)
235 1t3b_A Thiol:disulfide interch 97.7 7.5E-05 2.6E-09 55.7 6.3 106 40-165 85-210 (211)
236 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00023 7.7E-09 60.1 9.9 82 41-164 117-198 (521)
237 2ywm_A Glutaredoxin-like prote 97.7 0.00015 5.2E-09 54.2 7.9 72 42-144 21-97 (229)
238 2k8s_A Thioredoxin; dimer, str 97.5 0.00017 5.9E-09 45.0 5.6 66 45-144 4-69 (80)
239 1ego_A Glutaredoxin; electron 97.5 0.00014 4.9E-09 45.6 4.6 37 45-84 3-39 (85)
240 3uem_A Protein disulfide-isome 97.3 0.001 3.4E-08 53.1 8.9 95 42-167 136-231 (361)
241 1ttz_A Conserved hypothetical 97.2 0.00049 1.7E-08 44.1 4.9 74 45-165 3-76 (87)
242 2ec4_A FAS-associated factor 1 96.7 0.0062 2.1E-07 44.2 7.5 105 38-163 52-165 (178)
243 1wjk_A C330018D20RIK protein; 96.5 0.0007 2.4E-08 44.3 1.1 80 42-165 16-95 (100)
244 2hls_A Protein disulfide oxido 96.4 0.016 5.6E-07 43.8 8.3 30 41-71 25-56 (243)
245 2fgx_A Putative thioredoxin; N 96.4 0.0021 7.3E-08 42.7 2.8 39 43-85 30-68 (107)
246 3gv1_A Disulfide interchange p 96.3 0.0032 1.1E-07 44.2 3.5 33 34-67 7-39 (147)
247 4dvc_A Thiol:disulfide interch 96.2 0.014 4.7E-07 41.5 6.9 40 40-81 20-59 (184)
248 1h75_A Glutaredoxin-like prote 96.1 0.0092 3.1E-07 36.7 4.8 33 45-85 3-35 (81)
249 3hz8_A Thiol:disulfide interch 96.0 0.0031 1.1E-07 46.1 2.4 43 40-84 23-65 (193)
250 2cq9_A GLRX2 protein, glutared 96.0 0.019 6.6E-07 39.1 6.2 33 44-85 29-61 (130)
251 3kp9_A Vkorc1/thioredoxin doma 95.9 0.0035 1.2E-07 49.1 2.3 88 33-162 189-276 (291)
252 2lqo_A Putative glutaredoxin R 95.7 0.032 1.1E-06 35.8 5.9 39 49-94 9-47 (92)
253 2qc7_A ERP31, ERP28, endoplasm 95.6 0.014 4.9E-07 44.3 4.8 91 41-164 22-117 (240)
254 2c0g_A ERP29 homolog, windbeut 95.6 0.029 1E-06 42.8 6.5 94 40-164 32-130 (248)
255 2hze_A Glutaredoxin-1; thiored 95.6 0.016 5.5E-07 38.4 4.5 33 44-84 20-55 (114)
256 1r7h_A NRDH-redoxin; thioredox 95.6 0.018 6E-07 34.6 4.3 30 49-85 6-35 (75)
257 3q6o_A Sulfhydryl oxidase 1; p 95.4 0.042 1.4E-06 41.2 6.9 58 82-144 165-222 (244)
258 2ht9_A Glutaredoxin-2; thiored 95.4 0.027 9.3E-07 39.3 5.2 20 47-67 53-72 (146)
259 3c1r_A Glutaredoxin-1; oxidize 95.3 0.03 1E-06 37.4 5.0 33 45-85 27-63 (118)
260 1un2_A DSBA, thiol-disulfide i 95.1 0.0028 9.7E-08 46.6 -0.7 43 40-84 112-157 (197)
261 4f9z_D Endoplasmic reticulum r 94.8 0.46 1.6E-05 35.1 11.0 97 41-167 130-226 (227)
262 3ic4_A Glutaredoxin (GRX-1); s 94.7 0.15 5.2E-06 31.8 7.0 17 50-66 18-34 (92)
263 2klx_A Glutaredoxin; thioredox 94.1 0.16 5.3E-06 31.6 6.0 32 45-84 8-39 (89)
264 3qmx_A Glutaredoxin A, glutare 94.0 0.1 3.5E-06 33.7 5.1 35 46-88 19-53 (99)
265 1kte_A Thioltransferase; redox 94.0 0.016 5.6E-07 37.4 1.1 22 45-67 14-35 (105)
266 3feu_A Putative lipoprotein; a 93.9 0.041 1.4E-06 39.8 3.3 38 41-82 22-59 (185)
267 3l9v_A Putative thiol-disulfid 93.5 0.013 4.6E-07 42.5 0.1 42 40-83 13-57 (189)
268 3ihg_A RDME; flavoenzyme, anth 93.2 1.7 5.7E-05 36.2 12.4 111 3-164 421-532 (535)
269 1pn0_A Phenol 2-monooxygenase; 92.9 2.8 9.6E-05 36.2 13.7 138 2-165 479-645 (665)
270 2yan_A Glutaredoxin-3; oxidore 92.9 0.15 5.3E-06 32.9 4.5 27 52-85 30-56 (105)
271 1t1v_A SH3BGRL3, SH3 domain-bi 92.5 0.63 2.2E-05 29.2 7.0 41 50-91 8-48 (93)
272 3rhb_A ATGRXC5, glutaredoxin-C 92.5 0.15 5.1E-06 33.4 4.1 32 45-84 21-52 (113)
273 3nzn_A Glutaredoxin; structura 92.4 0.11 3.8E-06 33.5 3.3 22 45-67 24-45 (103)
274 1fov_A Glutaredoxin 3, GRX3; a 92.3 0.19 6.4E-06 30.5 4.1 29 50-85 7-35 (82)
275 1wik_A Thioredoxin-like protei 91.9 0.41 1.4E-05 31.1 5.7 28 52-86 28-55 (109)
276 2khp_A Glutaredoxin; thioredox 91.8 0.22 7.6E-06 31.0 4.2 33 45-85 8-40 (92)
277 3h8q_A Thioredoxin reductase 3 91.4 0.36 1.2E-05 31.7 5.1 29 49-84 22-50 (114)
278 2axo_A Hypothetical protein AT 90.7 2.8 9.7E-05 32.2 10.1 38 44-84 44-81 (270)
279 2ct6_A SH3 domain-binding glut 90.2 2.2 7.4E-05 27.8 8.0 44 50-94 14-57 (111)
280 3l9s_A Thiol:disulfide interch 89.0 0.13 4.6E-06 37.2 1.3 41 40-82 20-63 (191)
281 3c7m_A Thiol:disulfide interch 88.9 0.43 1.5E-05 33.9 4.0 43 40-84 16-59 (195)
282 3l78_A Regulatory protein SPX; 88.6 0.66 2.3E-05 31.0 4.5 65 46-121 2-70 (120)
283 1u6t_A SH3 domain-binding glut 88.5 2.5 8.4E-05 28.4 7.3 47 48-95 4-50 (121)
284 3tdg_A DSBG, putative uncharac 87.9 0.55 1.9E-05 36.2 4.2 40 40-83 146-185 (273)
285 3fz4_A Putative arsenate reduc 87.7 0.91 3.1E-05 30.3 4.8 64 46-120 5-72 (120)
286 1aba_A Glutaredoxin; electron 87.6 1.1 3.7E-05 27.6 4.8 29 49-84 5-37 (87)
287 3msz_A Glutaredoxin 1; alpha-b 87.5 0.96 3.3E-05 27.5 4.5 19 46-64 6-24 (89)
288 3t58_A Sulfhydryl oxidase 1; o 87.1 1.1 3.6E-05 37.8 5.9 52 88-144 171-222 (519)
289 1z3e_A Regulatory protein SPX; 86.8 0.86 3E-05 30.8 4.3 63 47-120 4-70 (132)
290 2dkh_A 3-hydroxybenzoate hydro 86.8 3.2 0.00011 35.6 8.8 139 3-163 468-635 (639)
291 2wci_A Glutaredoxin-4; redox-a 86.1 0.66 2.3E-05 31.7 3.4 27 52-85 48-74 (135)
292 3gx8_A Monothiol glutaredoxin- 86.0 1.7 5.9E-05 28.9 5.4 43 42-91 16-64 (121)
293 3gkx_A Putative ARSC family re 85.8 0.85 2.9E-05 30.5 3.8 64 46-120 6-73 (120)
294 3ctg_A Glutaredoxin-2; reduced 85.7 0.96 3.3E-05 30.5 4.1 15 45-60 39-53 (129)
295 3ipz_A Monothiol glutaredoxin- 85.3 0.96 3.3E-05 29.4 3.8 26 53-85 32-57 (109)
296 3zyw_A Glutaredoxin-3; metal b 85.1 0.92 3.1E-05 29.7 3.7 35 42-85 16-55 (111)
297 3us3_A Calsequestrin-1; calciu 84.8 3.1 0.00011 32.9 7.4 105 43-174 249-356 (367)
298 2wem_A Glutaredoxin-related pr 83.2 1.6 5.4E-05 29.0 4.2 32 53-91 34-66 (118)
299 3fhk_A UPF0403 protein YPHP; d 80.7 11 0.00039 25.8 11.0 36 127-163 106-141 (147)
300 1s3c_A Arsenate reductase; ARS 80.6 1.2 4E-05 30.7 2.9 64 47-121 5-72 (141)
301 2jvx_A NF-kappa-B essential mo 80.5 0.28 9.7E-06 24.1 -0.2 21 53-73 5-25 (28)
302 3rdw_A Putative arsenate reduc 79.7 1.7 5.9E-05 29.0 3.4 65 46-121 7-76 (121)
303 3gn3_A Putative protein-disulf 79.7 1.1 3.6E-05 32.2 2.5 41 41-82 14-54 (182)
304 3l4n_A Monothiol glutaredoxin- 79.4 1.4 4.9E-05 29.7 2.9 16 51-66 21-36 (127)
305 1rw1_A Conserved hypothetical 78.5 1.1 3.7E-05 29.5 2.1 43 47-96 3-49 (114)
306 3bci_A Disulfide bond protein 77.9 2.2 7.5E-05 30.1 3.7 41 41-82 11-53 (186)
307 3f0i_A Arsenate reductase; str 77.3 2.4 8.1E-05 28.2 3.5 65 46-121 6-75 (119)
308 3gmf_A Protein-disulfide isome 76.7 2.4 8.4E-05 30.9 3.7 48 34-82 8-57 (205)
309 2kok_A Arsenate reductase; bru 75.6 1.6 5.4E-05 29.0 2.3 61 46-119 7-71 (120)
310 3ghf_A Septum site-determining 75.4 5.5 0.00019 26.5 4.9 51 39-96 45-95 (120)
311 3f4s_A Alpha-DSBA1, putative u 74.4 2.8 9.7E-05 31.0 3.6 48 34-82 32-81 (226)
312 3gha_A Disulfide bond formatio 74.3 3.3 0.00011 30.0 3.9 46 36-82 24-71 (202)
313 3j21_Z 50S ribosomal protein L 72.3 12 0.0004 23.8 5.8 57 64-120 20-76 (99)
314 1sji_A Calsequestrin 2, calseq 70.8 24 0.00082 27.4 8.5 98 45-168 249-348 (350)
315 3ga8_A HTH-type transcriptiona 70.3 3.4 0.00011 25.2 2.7 36 38-73 23-64 (78)
316 1w41_A 50S ribosomal protein L 65.2 9.4 0.00032 24.3 4.2 57 64-120 21-77 (101)
317 1nm3_A Protein HI0572; hybrid, 65.1 4.2 0.00014 29.9 2.8 14 51-64 177-190 (241)
318 3iz5_f 60S ribosomal protein L 61.7 25 0.00087 22.9 5.9 57 65-121 32-88 (112)
319 2wul_A Glutaredoxin related pr 60.4 33 0.0011 22.6 6.7 51 42-96 20-71 (118)
320 4gxt_A A conserved functionall 59.7 32 0.0011 27.5 7.3 39 58-96 220-258 (385)
321 3v7q_A Probable ribosomal prot 59.4 23 0.00079 22.5 5.3 56 65-121 25-80 (101)
322 3mjh_B Early endosome antigen 55.2 2.2 7.4E-05 21.9 -0.2 20 54-73 8-27 (34)
323 3on1_A BH2414 protein; structu 54.4 26 0.00089 22.2 4.9 57 64-121 23-79 (101)
324 3cpq_A 50S ribosomal protein L 52.3 19 0.00065 23.3 4.0 56 65-120 27-82 (110)
325 2k9k_A TONB2; metal transport; 50.4 27 0.00094 22.1 4.5 35 129-163 43-78 (106)
326 4ev1_A Anabena TIC22; TIC22 fo 50.3 79 0.0027 23.8 8.0 83 6-111 12-111 (252)
327 2jnb_A NHP2-like protein 1; sp 50.3 37 0.0013 23.3 5.3 83 68-164 59-142 (144)
328 3u5e_c L32, RP73, YL38, 60S ri 48.9 29 0.001 22.2 4.5 58 64-121 27-84 (105)
329 3v7e_A Ribosome-associated pro 48.3 27 0.00092 21.2 4.0 57 64-121 16-72 (82)
330 1u07_A TONB protein; beta-hair 48.2 26 0.00087 21.5 4.0 48 113-164 16-64 (90)
331 3vi6_A 60S ribosomal protein L 47.4 44 0.0015 22.2 5.3 57 65-121 33-89 (125)
332 2in3_A Hypothetical protein; D 45.7 16 0.00054 26.0 3.1 36 45-81 9-44 (216)
333 4a18_G RPL30; ribosome, eukary 45.3 51 0.0017 20.9 5.2 58 64-121 27-84 (104)
334 3ktb_A Arsenical resistance op 44.0 63 0.0022 20.9 7.2 39 45-83 7-51 (106)
335 2v2f_A Penicillin binding prot 42.5 12 0.00042 17.3 1.4 15 130-144 6-20 (26)
336 4as2_A Phosphorylcholine phosp 41.8 29 0.001 27.1 4.3 38 59-96 143-180 (327)
337 3o85_A Ribosomal protein L7AE; 41.6 31 0.0011 22.8 3.8 79 66-164 38-121 (122)
338 4f9z_D Endoplasmic reticulum r 41.4 85 0.0029 22.5 6.6 48 111-166 63-112 (227)
339 4e6z_A Apicoplast TIC22, putat 40.6 1.2E+02 0.0041 23.1 7.6 94 6-121 75-182 (279)
340 1l6r_A Hypothetical protein TA 35.4 1E+02 0.0035 22.0 6.2 34 63-96 26-59 (227)
341 3kgk_A Arsenical resistance op 35.2 93 0.0032 20.3 7.4 88 46-162 5-99 (110)
342 3cwf_A Alkaline phosphatase sy 35.0 21 0.00073 22.9 2.1 15 130-144 50-64 (122)
343 2x8g_A Thioredoxin glutathione 34.8 31 0.0011 28.9 3.6 15 51-65 25-39 (598)
344 1xhj_A Nitrogen fixation prote 34.7 68 0.0023 20.0 4.3 32 32-65 28-59 (88)
345 3bj5_A Protein disulfide-isome 33.5 1.1E+02 0.0037 20.5 10.0 57 114-177 80-146 (147)
346 3s6j_A Hydrolase, haloacid deh 33.3 1.2E+02 0.004 20.9 6.6 35 62-96 94-128 (233)
347 3sk2_A EHPR; antibiotic resist 33.3 92 0.0032 19.7 5.3 58 75-144 72-129 (132)
348 4hi4_A Aerotaxis transducer AE 33.0 26 0.0009 21.9 2.3 15 130-144 17-31 (121)
349 2g2q_A Glutaredoxin-2; thiored 32.7 2.4 8.2E-05 28.3 -2.8 36 42-83 2-37 (124)
350 2aif_A Ribosomal protein L7A; 32.5 1.1E+02 0.0038 20.4 6.6 62 68-138 50-116 (135)
351 3a0s_A Sensor protein; PAS-fol 31.6 30 0.001 19.3 2.3 16 130-145 4-19 (96)
352 3fvv_A Uncharacterized protein 31.6 1.2E+02 0.0041 21.1 6.0 36 61-96 94-129 (232)
353 3fmw_A Oxygenase; mithramycin, 30.5 15 0.00052 30.9 1.0 34 2-48 445-480 (570)
354 3b33_A Sensor protein; structu 29.7 37 0.0013 20.5 2.6 16 130-145 19-34 (115)
355 3umv_A Deoxyribodipyrimidine p 29.6 2E+02 0.0068 23.8 7.6 55 41-96 67-128 (506)
356 3rri_A Glyoxalase/bleomycin re 29.6 1.1E+02 0.0036 19.3 5.0 17 129-145 111-127 (135)
357 3vhs_A ATPase wrnip1; zinc fin 28.5 4.2 0.00014 19.2 -1.6 11 53-63 8-18 (29)
358 3ec3_A Protein disulfide-isome 28.1 1.7E+02 0.0059 21.2 6.9 82 71-166 21-115 (250)
359 2obb_A Hypothetical protein; s 28.0 75 0.0026 21.5 4.0 43 63-109 28-73 (142)
360 2pr7_A Haloacid dehalogenase/e 27.6 72 0.0025 20.0 3.9 38 58-95 17-54 (137)
361 2h8l_A Protein disulfide-isome 27.5 1.8E+02 0.006 21.1 11.2 50 114-169 182-233 (252)
362 1ll8_A PAS kinase; PAS domain, 27.2 64 0.0022 19.4 3.4 16 130-145 10-26 (114)
363 2a4x_A Mitomycin-binding prote 26.6 1.3E+02 0.0043 19.1 5.4 57 75-145 71-127 (138)
364 2gx5_A GTP-sensing transcripti 26.4 93 0.0032 21.9 4.3 16 130-145 48-63 (170)
365 3fg8_A Uncharacterized protein 25.9 46 0.0016 20.5 2.6 16 130-145 24-39 (118)
366 3t12_B Gliding protein MGLB; G 25.9 1.4E+02 0.0047 20.1 5.0 16 130-145 28-43 (136)
367 2r47_A Uncharacterized protein 25.9 80 0.0027 22.0 3.8 59 44-109 87-145 (157)
368 3kzq_A Putative uncharacterize 25.8 45 0.0016 23.6 2.7 36 46-82 5-40 (208)
369 2fpr_A Histidine biosynthesis 25.8 1E+02 0.0036 20.9 4.6 25 60-84 43-67 (176)
370 1w63_Q Adapter-related protein 25.5 63 0.0022 22.2 3.3 19 129-147 3-21 (158)
371 3e58_A Putative beta-phosphogl 25.4 1.6E+02 0.0053 19.7 5.7 35 62-96 92-126 (214)
372 3kbb_A Phosphorylated carbohyd 25.1 1.7E+02 0.0057 20.0 7.4 35 62-96 87-121 (216)
373 3mfx_A Sensory BOX/ggdef famil 25.0 43 0.0015 21.7 2.3 16 130-145 19-34 (129)
374 2vv6_A FIXL, sensor protein FI 24.8 44 0.0015 20.4 2.3 16 130-145 5-20 (119)
375 2p9j_A Hypothetical protein AQ 24.6 1.5E+02 0.0052 19.4 5.8 33 64-96 41-73 (162)
376 3kts_A Glycerol uptake operon 24.5 1.3E+02 0.0044 21.6 4.9 67 63-138 42-115 (192)
377 2grx_C Protein TONB; beta barr 24.2 62 0.0021 24.0 3.2 36 129-164 167-203 (229)
378 2gj3_A Nitrogen fixation regul 24.1 53 0.0018 20.1 2.6 16 130-145 17-32 (120)
379 3olo_A Two-component sensor hi 24.1 52 0.0018 19.5 2.5 15 130-144 25-39 (118)
380 1nwz_A PYP, photoactive yellow 23.5 49 0.0017 22.0 2.3 16 130-145 29-44 (125)
381 3mxq_A Sensor protein; PSI2, M 23.5 46 0.0016 22.5 2.3 16 130-145 34-49 (152)
382 2vgl_S AP-2 complex subunit si 23.3 74 0.0025 21.3 3.3 19 129-147 3-21 (142)
383 2r78_A Sensor protein; sensory 23.2 55 0.0019 20.1 2.5 16 130-145 23-38 (117)
384 2hh8_A Hypothetical protein YD 23.2 97 0.0033 21.3 3.8 38 131-168 49-90 (149)
385 2qkp_A Uncharacterized protein 23.0 48 0.0016 22.3 2.3 17 130-146 31-47 (151)
386 3fc7_A HTR-like protein, senso 22.8 51 0.0017 19.9 2.3 16 130-145 31-46 (125)
387 2rbb_A Glyoxalase/bleomycin re 22.7 1.5E+02 0.0053 18.7 5.0 54 78-145 78-131 (141)
388 1mzu_A PPR; photoactive yellow 22.5 53 0.0018 22.0 2.3 16 130-145 34-49 (129)
389 1vkf_A Glycerol uptake operon 22.3 1.8E+02 0.0062 20.8 5.3 63 64-136 45-114 (188)
390 1lr0_A TOLA protein; domain-sw 22.2 1.7E+02 0.006 19.2 5.9 37 129-165 55-92 (129)
391 2z1d_A Hydrogenase expression/ 22.0 1.7E+02 0.0057 23.4 5.4 27 46-72 58-84 (372)
392 2vlg_A Sporulation kinase A; h 21.9 1E+02 0.0034 19.3 3.6 16 130-145 11-26 (111)
393 2pib_A Phosphorylated carbohyd 21.7 1.7E+02 0.0058 19.6 5.1 34 63-96 88-121 (216)
394 2wq7_A RE11660P; lyase-DNA com 21.7 2.2E+02 0.0074 23.8 6.4 37 60-96 87-123 (543)
395 2e50_A Protein SET; histone ch 21.6 31 0.0011 25.5 1.1 15 166-180 152-166 (225)
396 1d06_A Nitrogen fixation regul 21.1 57 0.0019 20.3 2.3 16 130-145 28-43 (130)
397 2zd7_A VPS75, vacuolar protein 20.9 20 0.00068 27.3 -0.1 15 165-179 139-153 (264)
398 3nvb_A Uncharacterized protein 20.9 3.2E+02 0.011 21.8 8.3 37 59-95 256-292 (387)
399 3v67_A Sensor protein CPXA; PA 20.8 73 0.0025 21.5 2.8 16 129-144 56-71 (138)
400 3bwl_A Sensor protein; structu 20.6 68 0.0023 19.5 2.6 16 130-145 29-44 (126)
401 3bqa_A Sensor protein PHOQ; hi 20.5 58 0.002 22.3 2.1 17 128-144 40-57 (148)
402 2imf_A HCCA isomerase, 2-hydro 20.5 76 0.0026 22.2 3.0 27 46-72 3-29 (203)
403 1wr8_A Phosphoglycolate phosph 20.4 2.3E+02 0.0079 19.9 5.9 35 62-96 23-57 (231)
404 3kyp_A Pfnaps, nucleosome asse 20.2 40 0.0014 24.2 1.4 14 167-180 124-137 (193)
No 1
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-44 Score=271.65 Aligned_cols=170 Identities=36% Similarity=0.602 Sum_probs=156.7
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+++|++||+|+++++. |.+| ++++|+|++||++||+||++.|||+|+.|+..|++.+++|+++|+++|+|
T Consensus 23 ~~VG~~APdF~l~a~~------d~~~----~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigi 92 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVV------DGVF----DEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFA 92 (216)
T ss_dssp CCTTSBCCCCCEEEEE------TTEE----EEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred hhcCCcCCCCCCcceE------CCCC----cEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEe
Confidence 6899999999998432 4566 89999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHHcCC---CcccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 82 SSDNEFVKLAWRRENSN---LYKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
|.|+.+.+.+|++.... ..+++||+++|+++++++.||++ ...|++.|++||||++|+|+++.+++.+.+++++++
T Consensus 93 S~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEi 172 (216)
T 3sbc_A 93 STDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEA 172 (216)
T ss_dssp ESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHH
T ss_pred ecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHH
Confidence 99999999999976432 34689999999999999999999 777888999999999999999999889999999999
Q ss_pred HHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 158 LRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 158 l~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
|++|+++| +++.||+||+||++||
T Consensus 173 Lr~l~AlQ~~~~~~~~~Pa~W~~G~~~i 200 (216)
T 3sbc_A 173 LRLVEAFQWTDKNGTVLPCNWTPGAATI 200 (216)
T ss_dssp HHHHHHHHHHHHHCCBBCTTCCTTSCCB
T ss_pred HHHHHHhhhHhhcCCCcCCCCCCCCcee
Confidence 99999999 7889999999999986
No 2
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=100.00 E-value=1.4e-43 Score=268.93 Aligned_cols=171 Identities=35% Similarity=0.661 Sum_probs=142.8
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+++|++||+|+++++.+ |.+| ++++|+||+||++||+||++.|||+|+.|+..|++++++|+++|++||||
T Consensus 26 ~~vG~~APdF~~~a~l~-----d~~g----~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigi 96 (219)
T 3tue_A 26 AKINSPAPSFEEVALMP-----NGSF----KKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLAC 96 (219)
T ss_dssp CCTTSBCCCCEEEEECT-----TSCE----EEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEE
T ss_pred cccCCcCCCCccccccc-----CCCC----cEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEe
Confidence 47999999999764332 6788 99999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHHcC---CCcccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 82 SSDNEFVKLAWRRENS---NLYKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
|.|+...+.+|+++.. ...+++||+++|+++++++.|||+ ...|++.|++||||++|+|+++.+++....++++++
T Consensus 97 S~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~Ev 176 (219)
T 3tue_A 97 SIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEV 176 (219)
T ss_dssp ESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHH
T ss_pred eCCchhhHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHH
Confidence 9999999999997642 234689999999999999999999 777888999999999999999998888999999999
Q ss_pred HHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 158 LRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 158 l~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
|++|+++| +++.||+||++|+++|
T Consensus 177 Lr~l~aLQ~~~~~~~~~Pa~W~~G~~~i 204 (219)
T 3tue_A 177 LRLLEAFQFVEKHGEVCPANWKKGDPGM 204 (219)
T ss_dssp HHHHHHHHHHHHC---------------
T ss_pred HHHHHHhhhHHhcCCCcCCCCCCCCccc
Confidence 99999998 5789999999999986
No 3
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=100.00 E-value=5.6e-40 Score=255.76 Aligned_cols=171 Identities=30% Similarity=0.550 Sum_probs=139.8
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++.+|+++|+|++++.. |.+| ++++|++++||++||+||+++||++|+.+++.|++++++|+++|++||+
T Consensus 61 ~l~vG~~aPdF~l~~l~------d~~G----~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~ 130 (254)
T 3tjj_A 61 KAKISKPAPYWEGTAVI------DGEF----KELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVA 130 (254)
T ss_dssp CCCTTSBCCCCEEEEEE------TTEE----EEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEE
T ss_pred ccCCCCCCCCcEeeeec------CCCC----cEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEE
Confidence 36799999999988321 4467 8999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHHcCCCc---ccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHH
Q psy2878 81 GSSDNEFVKLAWRRENSNLY---KLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIE 156 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ 156 (181)
||.|+.+.+++|++++...+ +++|++++|++.++++.||+. ...|.+.|++||||++|+|++++.++....+++++
T Consensus 131 IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~e 210 (254)
T 3tjj_A 131 CSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDE 210 (254)
T ss_dssp EESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHH
T ss_pred EcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHH
Confidence 99999999999998653322 689999999999999999998 55577789999999999999999877778889999
Q ss_pred HHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 157 TLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 157 ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
+++.|++++ ++..||+||++|++||
T Consensus 211 il~~L~alq~~~~~~~~cp~~W~~g~~~~ 239 (254)
T 3tjj_A 211 TLRLVQAFQYTDKHGEVAPAGWKPGSETI 239 (254)
T ss_dssp HHHHHHHHHHHHHHC--------------
T ss_pred HHHHHHhhccccccCccccCCCCCCCcee
Confidence 999999988 5789999999999986
No 4
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=100.00 E-value=2.1e-39 Score=250.71 Aligned_cols=170 Identities=32% Similarity=0.572 Sum_probs=151.5
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+++|+|++++.. |.+| ++++|++++||++||+||+++|||+|+.+++.|++++++|+++|++||+|
T Consensus 48 l~vG~~aPdF~l~~~~------d~~G----~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~I 117 (240)
T 3qpm_A 48 AKISKPAPQWEGTAVI------NGEF----KELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVAC 117 (240)
T ss_dssp CCTTSBCCCCEEEEEE------TTEE----EEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred CCCCCCCCCcEeeeee------CCCC----cEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 5799999999988321 3456 79999999999999999988999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHHcCCC---cccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 82 SSDNEFVKLAWRRENSNL---YKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
|.|+.+.+++|++++... .+++|++++|++.++++.||+. ...|+..|++||||++|+|++++.++....++++++
T Consensus 118 s~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~ei 197 (240)
T 3qpm_A 118 SVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDET 197 (240)
T ss_dssp ESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHH
T ss_pred ECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHH
Confidence 999999999999875322 3689999999999999999998 556777899999999999999998777778899999
Q ss_pred HHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 158 LRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 158 l~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
++.|++++ .+..||+||++|++||
T Consensus 198 l~~l~~lq~~~~~~~~cp~~W~~g~~~~ 225 (240)
T 3qpm_A 198 LRLVQAFQYTDKHGEVCPAGWKPGSDTI 225 (240)
T ss_dssp HHHHHHHHHHHHHSCBBCTTCCTTSCCB
T ss_pred HHHHHHhhhhhhcCCccCCCCCCCCcee
Confidence 99999988 4789999999999986
No 5
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=100.00 E-value=9.6e-39 Score=237.99 Aligned_cols=168 Identities=31% Similarity=0.568 Sum_probs=147.4
Q ss_pred ccCccCCCcEEecccCCCCCCCC-CcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEE-NNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~-~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
.+|+++|+|+++ |. +| ..++++|++++||++||+||+++|||+|+.+++.|++++++|++++++||+|
T Consensus 2 ~~G~~aP~f~l~---------~~~~G--~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~I 70 (186)
T 1n8j_A 2 LINTKIKPFKNQ---------AFKNG--EFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSV 70 (186)
T ss_dssp CTTCBCCCCEEE---------EEETT--EEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCCCcCCCcEee---------cccCC--cceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 589999999999 66 35 1148999999999999999977999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHH
Q psy2878 82 SSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRI 160 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~ 160 (181)
|.|+++.+++|++++....+++|++++|+++++++.||+. ...|++.|++||||++|+|++++.+.....++.+++++.
T Consensus 71 s~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~ 150 (186)
T 1n8j_A 71 STDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRK 150 (186)
T ss_dssp ESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHH
T ss_pred ECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHH
Confidence 9999999999999864344789999999999999999997 444556799999999999999997655556789999999
Q ss_pred HHhhcc-----CCccccCCCCCCCCC
Q psy2878 161 LDAIQT-----GKLCACNRTLNGKTL 181 (181)
Q Consensus 161 l~~l~~-----~~~~~~~~~~~~~~~ 181 (181)
|++++. +.+||+||++|++++
T Consensus 151 l~~l~~~~~~p~~~~p~~w~~~~~~~ 176 (186)
T 1n8j_A 151 IKAAQYVAAHPGEVCPAKWKEGEATL 176 (186)
T ss_dssp HHHHHHHHHSTTCBBCTTCCTTSCCB
T ss_pred HHHHHHHhhcCCCccCCCCCCCCccc
Confidence 998874 789999999999875
No 6
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=242.79 Aligned_cols=170 Identities=31% Similarity=0.553 Sum_probs=148.5
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+++|+|++++.. |.+| ++++|++++||++||+||+++|||+|+.+++.|++++++|++++++||+|
T Consensus 19 ~~~G~~aP~f~l~~~~------~~~g----~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~I 88 (211)
T 2pn8_A 19 YFQSMPAPYWEGTAVI------DGEF----KELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVAC 88 (211)
T ss_dssp CCSSCBCCCCEEEEEE------TTEE----EEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEE
T ss_pred CCCCCcCCCeEeeccc------CCCC----cEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 6789999999999210 1357 89999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHHcCCC---cccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 82 SSDNEFVKLAWRRENSNL---YKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
|.|+++.+++|++++... .+++|++++|++.++++.||+. ...|...|++||||++|+|++++.+.....++.+++
T Consensus 89 s~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~el 168 (211)
T 2pn8_A 89 SVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDET 168 (211)
T ss_dssp ESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHH
T ss_pred ECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHH
Confidence 999999999999865222 2678999999999999999997 444556899999999999999997666666789999
Q ss_pred HHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 158 LRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 158 l~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
++.|++++ .+..||+||++|+++|
T Consensus 169 l~~l~~l~~~~~~~~~~p~~w~~g~~~~ 196 (211)
T 2pn8_A 169 LRLVQAFQYTDKHGEVCPAGWKPGSETI 196 (211)
T ss_dssp HHHHHHHHHHHHHCCBBCTTCCTTSCCB
T ss_pred HHHHHHhhhcccCCcccCCCCCCCCccc
Confidence 99999987 5789999999999885
No 7
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=100.00 E-value=9.8e-38 Score=238.37 Aligned_cols=171 Identities=34% Similarity=0.587 Sum_probs=137.2
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++.+|+++|+|++++.. +.+| ++++|++++||++||+||+++|||+|+.+++.|++++++|++++++||+
T Consensus 26 ~l~~G~~aP~f~l~~~~------~~~g----~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~ 95 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVV------SGEF----KEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVA 95 (220)
T ss_dssp -CCTTSBCCCCEEEEEC------SSSE----EEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred cccCCCCCCCcEEEeee------CCCC----cEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 36799999999998422 4678 9999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHHcCCCc---ccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHH
Q psy2878 81 GSSDNEFVKLAWRRENSNLY---KLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIE 156 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ 156 (181)
||.|+.+.+++|++++.... +++|++++|++.++++.||+. ...|...|++||||++|+|++++.+......+.++
T Consensus 96 Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~e 175 (220)
T 1zye_A 96 VSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEE 175 (220)
T ss_dssp EESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHH
T ss_pred EECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHH
Confidence 99999999999998753332 679999999999999999997 55566789999999999999999766666788999
Q ss_pred HHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 157 TLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 157 ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
++++|++++ .+..||++|++|+++|
T Consensus 176 ll~~l~~l~~~~~~~~~cp~~W~~g~~~~ 204 (220)
T 1zye_A 176 TLRLVKAFQFVEAHGEVSPANWTPESPTI 204 (220)
T ss_dssp HHHHHHHHHHTTC----------------
T ss_pred HHHHHHHhhhhcccCCccCCCCCCCCcee
Confidence 999999887 4678999999999875
No 8
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=100.00 E-value=1.3e-37 Score=236.68 Aligned_cols=170 Identities=35% Similarity=0.635 Sum_probs=149.4
Q ss_pred CCccCccCCCcEEecccCCCCCCCC--CcccceeeeecCCC-CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEE--NNVSAFKVITESSF-PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~~~~l~~~-~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~ 77 (181)
++.+|+++|+|+++ +. +| .+++++|+++ +||++||+||+++|||+|+.+++.|++++++|++.+++
T Consensus 20 ~l~~G~~aP~f~l~---------~~~~~G--~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~ 88 (213)
T 2i81_A 20 PTYVGKEAPFFKAE---------AVFGDN--SFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVE 88 (213)
T ss_dssp CCCBTSBCCCCEEE---------EECTTS--CEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEE
T ss_pred cccCCCcCCCeEee---------ccccCC--ceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 46899999999999 66 55 2358999999 99999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHHHcCC---CcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCH
Q psy2878 78 LLGGSSDNEFVKLAWRRENSN---LYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNP 154 (181)
Q Consensus 78 vi~Is~d~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~ 154 (181)
||+||.|+++.+++|++++.. ..+++|++++|++.++++.||+....|+..|++||||++|+|++++.+.....++.
T Consensus 89 vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~ 168 (213)
T 2i81_A 89 LLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSV 168 (213)
T ss_dssp EEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCH
T ss_pred EEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCH
Confidence 999999999999999886532 22689999999999999999987333557899999999999999997666667789
Q ss_pred HHHHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 155 IETLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 155 ~~ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
++++++|++++ .+.+||+||++|+++|
T Consensus 169 ~ell~~l~~l~~~~~~~~~cp~~w~~g~~~~ 199 (213)
T 2i81_A 169 DEILRIIDAIQHHEKYGDVCPANWQKGKVSM 199 (213)
T ss_dssp HHHHHHHHHHHHHHHHCCBCCTTCCTTSCCB
T ss_pred HHHHHHHHHHHhhhhcCCCcCCCCCcCCccc
Confidence 99999999988 6789999999999875
No 9
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=100.00 E-value=1.8e-37 Score=233.71 Aligned_cols=170 Identities=35% Similarity=0.643 Sum_probs=150.0
Q ss_pred CCccCccCCCcEEecccCCCCCCCC--CcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEE--NNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAIL 78 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~v 78 (181)
++.+|+++|+|+++ +. +| .+++++|++++||++||+||+++||++|+.+++.|++++++|++.+++|
T Consensus 5 ~~~~G~~aP~f~l~---------~~~~~g--~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~v 73 (202)
T 1uul_A 5 EAEDLHPAPDFNET---------ALMPNG--TFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEV 73 (202)
T ss_dssp CCCTTSBCCCCEEE---------EECTTS--CEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEE
T ss_pred cccCCCcCCCcEee---------eeecCC--CccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEE
Confidence 46899999999999 44 33 1268999999999999999989999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHHHcCCC---cccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCH
Q psy2878 79 LGGSSDNEFVKLAWRRENSNL---YKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNP 154 (181)
Q Consensus 79 i~Is~d~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~ 154 (181)
|+||.|+.+.+++|++++... .+++|++++|.+.++++.||+. ...|...|++||||++|+|++++.+.....++.
T Consensus 74 i~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~ 153 (202)
T 1uul_A 74 LACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDV 153 (202)
T ss_dssp EEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred EEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCH
Confidence 999999999999999875322 2688999999999999999998 555667899999999999999997666667889
Q ss_pred HHHHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 155 IETLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 155 ~~ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
+++++.|++++ .+..||++|++|+++|
T Consensus 154 ~ell~~l~~l~~~~~~~~~~p~~w~~g~~~~ 184 (202)
T 1uul_A 154 DEALRLVKAFQFVEKHGEVCPANWKPGDKTM 184 (202)
T ss_dssp HHHHHHHHHHHHHHHHSCBBCTTCCTTSCCB
T ss_pred HHHHHHHHHhhhhhhcCCccCCCcCCCCcee
Confidence 99999999988 5789999999999985
No 10
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=100.00 E-value=2.4e-38 Score=241.82 Aligned_cols=166 Identities=26% Similarity=0.411 Sum_probs=146.4
Q ss_pred CccCccCCCcEEecccCCCCCCCC--CcccceeeeecCCCCCC-eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEE--NNVSAFKVITESSFPGK-WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAIL 78 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~~~~l~~~~gk-~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~v 78 (181)
+.+|+.+|+|++. +. +| +++|++++|| ++||+||+++|||+|+.+++.|++++++|+++|+++
T Consensus 3 l~iG~~aP~F~l~---------~~~~~G-----~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~v 68 (220)
T 1xcc_A 3 YHLGATFPNFTAK---------ASGIDG-----DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKL 68 (220)
T ss_dssp CCTTCBCCCCEEC---------BTTCSS-----CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEE
T ss_pred CCCCCCCCCcEee---------cccCCC-----cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 7899999999999 66 65 6999999997 899999899999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHHHcC---CCcccceeEEEcCCchHHHHhCCC-CC----CC--cceeeEEEEcCCCcEEEEEeccC
Q psy2878 79 LGGSSDNEFVKLAWRRENS---NLYKLNHWQFSDTNGSLIDQLGIR-HE----TG--VALRATFIFDPQNIIQHITVNNL 148 (181)
Q Consensus 79 i~Is~d~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~gv~-~~----~g--~~~p~~~liD~~g~i~~~~~~~~ 148 (181)
|+||.|+.+.+++|.+... ...+++||+++|+++++++.||+. .. .| ...|++||||++|+|++++.++.
T Consensus 69 i~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~ 148 (220)
T 1xcc_A 69 IGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPA 148 (220)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECT
T ss_pred EEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCC
Confidence 9999999999999988421 124889999999999999999997 21 12 35789999999999999998777
Q ss_pred CCCCCHHHHHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 149 NVGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 149 ~~~~~~~~ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
+.+++.+++++.|+++| ++..||+||++|+++|
T Consensus 149 ~~g~~~~ell~~i~~lq~~~~~~~~~p~~w~~g~~~~ 185 (220)
T 1xcc_A 149 TTGRNAHEILRVLKSLQLTYTTPVATPVNWNEGDKCC 185 (220)
T ss_dssp TBCCCHHHHHHHHHHHHHHHHSSEEBCTTCCTTSCEE
T ss_pred CCCCCHHHHHHHHHHHHhhhcCCcccCCCcCcCCceE
Confidence 77789999999999998 4678999999999974
No 11
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=100.00 E-value=2.3e-38 Score=243.79 Aligned_cols=166 Identities=23% Similarity=0.379 Sum_probs=147.1
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCC-eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGK-WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk-~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
+.+|+.+|+|++. +.+| +++|++++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+
T Consensus 3 l~iG~~aPdF~l~---------~~~G-----~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vig 68 (233)
T 2v2g_A 3 ITLGEVFPNFEAD---------STIG-----KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIA 68 (233)
T ss_dssp CCTTCBCCCCEEE---------ETTC-----CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEE
T ss_pred CCCCCCCCCcEEe---------cCCC-----CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEE
Confidence 7899999999999 7777 5899999997 99999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHHcCC--Cc--ccceeEEEcCCchHHHHhCCC-CC----CC--cceeeEEEEcCCCcEEEEEeccCC
Q psy2878 81 GSSDNEFVKLAWRRENSN--LY--KLNHWQFSDTNGSLIDQLGIR-HE----TG--VALRATFIFDPQNIIQHITVNNLN 149 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~--~~--~~~~~~~~D~~~~~~~~~gv~-~~----~g--~~~p~~~liD~~g~i~~~~~~~~~ 149 (181)
||.|+.+.+++|++.... .. +++||+++|++.++++.||+. .. .| ...|++||||++|+|++++.++..
T Consensus 69 IS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~ 148 (233)
T 2v2g_A 69 LSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPAT 148 (233)
T ss_dssp EESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTT
T ss_pred EcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCC
Confidence 999999999999985321 23 688999999999999999997 21 12 357899999999999999987777
Q ss_pred CCCCHHHHHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 150 VGRNPIETLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 150 ~~~~~~~ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
..++.+++++.|+++| .+.+||+||++|++||
T Consensus 149 ~gr~~~eilr~l~~Lq~~~~~~~~~p~~W~~g~~~~ 184 (233)
T 2v2g_A 149 TGRNFSEILRVIDSLQLTAQKKVATPADWQPGDRCM 184 (233)
T ss_dssp BCCCHHHHHHHHHHHHHHHHSSEEBCTTCCTTSCEE
T ss_pred CCCCHHHHHHHHHHHHhhccCCccCCCCcCcCCceE
Confidence 7789999999999998 4678999999999875
No 12
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=100.00 E-value=3.1e-37 Score=235.88 Aligned_cols=169 Identities=34% Similarity=0.562 Sum_probs=137.2
Q ss_pred CccCccCCCcEEecccCCCCCCCC--CcccceeeeecCCC-CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEE--NNVSAFKVITESSF-PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAIL 78 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~~~~l~~~-~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~v 78 (181)
+.+|+++|+|+++ |. +| .+++++|+++ +||++||+||+++|||+|+.+++.|++++++|++.+++|
T Consensus 25 l~~G~~aP~F~l~---------~~~~~G--~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~v 93 (221)
T 2c0d_A 25 SLVTKKAYNFTAQ---------GLNKNN--EIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVEL 93 (221)
T ss_dssp -CTTSBCCCCEEE---------EECTTS--CEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEE
T ss_pred CCCCCCCCCeEEe---------ccccCC--CccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEE
Confidence 5799999999999 66 55 2358999999 999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHHHcCCC---cccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHH
Q psy2878 79 LGGSSDNEFVKLAWRRENSNL---YKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPI 155 (181)
Q Consensus 79 i~Is~d~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~ 155 (181)
|+||.|+++.+++|++++... .+++|++++|+++++++.||+....|...|++||||++|+|++.+.+......+.+
T Consensus 94 v~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ 173 (221)
T 2c0d_A 94 LGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQ 173 (221)
T ss_dssp EEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHH
T ss_pred EEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHH
Confidence 999999999999999875221 16789999999999999999851123467999999999999999976555567899
Q ss_pred HHHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 156 ETLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 156 ~ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
++++.|++++ .+..||++|.+|+++|
T Consensus 174 ell~~l~~L~~~~~~~~~cp~~W~~g~~~~ 203 (221)
T 2c0d_A 174 EVLRTIDSIIHVDTSGEVCPINWKKGQKAF 203 (221)
T ss_dssp HHHHHHHHHHHHHHHCCSCC----------
T ss_pred HHHHHHHHHhhhhcCCCcCCCCCCCCCccc
Confidence 9999999887 5789999999999875
No 13
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=100.00 E-value=1.7e-37 Score=232.78 Aligned_cols=170 Identities=34% Similarity=0.612 Sum_probs=149.8
Q ss_pred CCccCccCCCcEEecccCCCCCCCC-CcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEE-NNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~-~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi 79 (181)
++.+|+.+|+|+++ +. +| ..++++|++++||++||+||+++||++|+.+++.|++++++|++++++||
T Consensus 4 ~l~~G~~aP~f~l~---------~~~~g--~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv 72 (197)
T 1qmv_A 4 NARIGKPAPDFKAT---------AVVDG--AFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVL 72 (197)
T ss_dssp TBCTTSBCCCCEEE---------EEETT--EEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEE
T ss_pred cccCCCCCCCeEeE---------eecCC--CccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 47899999999999 54 32 11789999999999999999899999999999999999999999899999
Q ss_pred EEecCCHHHHHHHHHHcCCCc---ccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHH
Q psy2878 80 GGSSDNEFVKLAWRRENSNLY---KLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPI 155 (181)
Q Consensus 80 ~Is~d~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~ 155 (181)
+||.|+.+.+++|++++.... +++|+++.|.+.++++.||+. ...+...|++||||++|+|++++.+..+..++.+
T Consensus 73 ~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ 152 (197)
T 1qmv_A 73 GVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVD 152 (197)
T ss_dssp EEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHH
T ss_pred EEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHH
Confidence 999999999999998763332 789999999999999999997 4455668999999999999999976666678899
Q ss_pred HHHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 156 ETLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 156 ~ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
++++.|++++ .+.+||+||++|+++|
T Consensus 153 e~l~~l~~l~~~~~~~~~cp~~w~~g~~~~ 182 (197)
T 1qmv_A 153 EALRLVQAFQYTDEHGEVCPAGWKPGSDTI 182 (197)
T ss_dssp HHHHHHHHHHHHHHHCCBBCTTCCTTSCCB
T ss_pred HHHHHHHhcchhhccCCccCCCcCcCCccc
Confidence 9999999887 6789999999999985
No 14
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=100.00 E-value=8.6e-38 Score=239.37 Aligned_cols=167 Identities=26% Similarity=0.370 Sum_probs=146.1
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCC-eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGK-WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk-~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi 79 (181)
++.+|+.+|+|++. +.+| +++|++++|| ++||+||+++|||+|+.+++.|++++++|+++|++||
T Consensus 4 ~l~~G~~aP~F~l~---------~~~G-----~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi 69 (224)
T 1prx_A 4 GLLLGDVAPNFEAN---------TTVG-----RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLI 69 (224)
T ss_dssp -CCTTCBCCCCEEE---------ETTE-----EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred cCCCcCCCCCcEEe---------cCCC-----CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEE
Confidence 36799999999999 7776 6999999997 8999998899999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHHcCC---C---cccceeEEEcCCchHHHHhCCC-CC----C--CcceeeEEEEcCCCcEEEEEec
Q psy2878 80 GGSSDNEFVKLAWRRENSN---L---YKLNHWQFSDTNGSLIDQLGIR-HE----T--GVALRATFIFDPQNIIQHITVN 146 (181)
Q Consensus 80 ~Is~d~~~~~~~~~~~~~~---~---~~~~~~~~~D~~~~~~~~~gv~-~~----~--g~~~p~~~liD~~g~i~~~~~~ 146 (181)
+||.|+.+.+++|+++... . .+++|++++|+++++++.||+. .. . ....|++||||++|+|++++.+
T Consensus 70 ~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~ 149 (224)
T 1prx_A 70 ALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILY 149 (224)
T ss_dssp EEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEEC
T ss_pred EEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEec
Confidence 9999999999999986211 0 3889999999999999999997 21 1 2357899999999999999987
Q ss_pred cCCCCCCHHHHHHHHHhhcc----CCccccCCCCCCCCC
Q psy2878 147 NLNVGRNPIETLRILDAIQT----GKLCACNRTLNGKTL 181 (181)
Q Consensus 147 ~~~~~~~~~~ll~~l~~l~~----~~~~~~~~~~~~~~~ 181 (181)
+...+++.+++++.|++++. +..||+||++|++||
T Consensus 150 ~~~~gr~~~eil~~i~~l~~~~~~~~~~p~~W~~g~~~~ 188 (224)
T 1prx_A 150 PATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSVM 188 (224)
T ss_dssp CTTBCCCHHHHHHHHHHHHHHHHHCEEBCTTCCTTSCEE
T ss_pred CCCCCCCHHHHHHHHHHHHhhccCCcCCCCCCCCCCceE
Confidence 66677899999999999984 678999999999874
No 15
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=100.00 E-value=1.8e-37 Score=237.16 Aligned_cols=171 Identities=33% Similarity=0.598 Sum_probs=150.2
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++.+|+++|+|++++.. |.+| ++++|++++||++||+||.++||++|+.+++.|++++++|++++++||+
T Consensus 39 ~l~~G~~aP~f~l~~~~------d~~G----~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~ 108 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVI------NGEF----KEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIA 108 (222)
T ss_dssp -CCSSEECCCCEEEEEE------TTEE----EEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEE
T ss_pred cccCCCCCCCeEEeccc------CCCC----cEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEE
Confidence 36899999999999321 2367 8999999999999999997799999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHHcCCC---cccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHH
Q psy2878 81 GSSDNEFVKLAWRRENSNL---YKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIE 156 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ 156 (181)
||.|+.+...+|.+.+... .+++|+++.|++.++++.|++. ...|+..|++||||++|+|++++.+.......+++
T Consensus 109 Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~ 188 (222)
T 3ztl_A 109 CSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDE 188 (222)
T ss_dssp EESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHH
T ss_pred EECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHH
Confidence 9999999999999875332 2789999999999999999998 55566789999999999999999866666678999
Q ss_pred HHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 157 TLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 157 ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
+++.|++++ .+.+||++|++|+++|
T Consensus 189 il~~l~~l~~~~~~~~~c~~~w~~~~~~~ 217 (222)
T 3ztl_A 189 TLRLLDAFQFVEKHGEVCPVNWKRGQHGI 217 (222)
T ss_dssp HHHHHHHHHHHHHHSCBBCTTCCTTSCCB
T ss_pred HHHHHHHhhcccccCccCCcCcCCCCccc
Confidence 999999887 5689999999999885
No 16
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=100.00 E-value=6.7e-38 Score=227.52 Aligned_cols=147 Identities=27% Similarity=0.423 Sum_probs=128.2
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
|+++|++||+|+++ |.+| ++++|++++||++||+||+++|||+|+.+++.|+++++++++.++.+++
T Consensus 3 ~l~vG~~aPdF~l~---------~~~G----~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~ 69 (157)
T 4g2e_A 3 MVEIGELAPDFELP---------DTEL----KKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLG 69 (157)
T ss_dssp CCCTTSBCCCCEEE---------BTTS----CEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEE
T ss_pred cCCCCCCCcCeEeE---------CCCC----CEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEee
Confidence 78999999999999 8999 9999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC-CCCC-----cceeeEEEEcCCCcEEEEEeccCCC-CCC
Q psy2878 81 GSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR-HETG-----VALRATFIFDPQNIIQHITVNNLNV-GRN 153 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~-~~~g-----~~~p~~~liD~~g~i~~~~~~~~~~-~~~ 153 (181)
||.|+++.+++|++++ +++|++++|+++++++.||+. ...+ .+.|++||||++|+|++++++.... ..+
T Consensus 70 vs~d~~~~~~~~~~~~----~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~ 145 (157)
T 4g2e_A 70 ISVDPPFSNKAFKEHN----KLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPP 145 (157)
T ss_dssp EESSCHHHHHHHHHHT----TCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCC
T ss_pred ecccchhHHHHHHHHc----CCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCC
Confidence 9999999999999998 999999999999999999996 2222 3578999999999999999754443 457
Q ss_pred HHHHHHHHHhh
Q psy2878 154 PIETLRILDAI 164 (181)
Q Consensus 154 ~~~ll~~l~~l 164 (181)
.++++++|++|
T Consensus 146 ~~eil~~l~~L 156 (157)
T 4g2e_A 146 YDEIEKVVKSL 156 (157)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 89999999886
No 17
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=100.00 E-value=6e-37 Score=227.91 Aligned_cols=167 Identities=31% Similarity=0.586 Sum_probs=137.5
Q ss_pred CccCccCCCcEEecccCCCCCCCCCccccee----eeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFK----VITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~----~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~ 77 (181)
+.+|+.+|+|++. |.+| + ++++++++||++||+||+++||++|+.+++.|++++++|++++++
T Consensus 1 ~~~G~~~P~f~l~---------~~~g----~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~ 67 (187)
T 1we0_A 1 SLIGTEVQPFRAQ---------AFQS----GKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVE 67 (187)
T ss_dssp CCTTCBCCCCEEE---------EECS----SSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEE
T ss_pred CCCCCcCCCeEEe---------ccCC----CccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCE
Confidence 4689999999999 8888 7 999999999999999998999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHH
Q psy2878 78 LLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIE 156 (181)
Q Consensus 78 vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ 156 (181)
+++||.|+++.+++|++++....+++|+++.|++.++++.||+. ...|...|++||||++|+|++++.+......+.++
T Consensus 68 vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~ 147 (187)
T 1we0_A 68 VYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDAST 147 (187)
T ss_dssp EEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTH
T ss_pred EEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHH
Confidence 99999999999999988752223689999999999999999997 44455789999999999999999765555567888
Q ss_pred HHHHHHhhcc-----CCccccCCCCCCCCC
Q psy2878 157 TLRILDAIQT-----GKLCACNRTLNGKTL 181 (181)
Q Consensus 157 ll~~l~~l~~-----~~~~~~~~~~~~~~~ 181 (181)
+++.|++++. +..||++|.+|+++|
T Consensus 148 l~~~l~~l~~~~~~~~~~~p~~w~~~~~~~ 177 (187)
T 1we0_A 148 LINKVKAAQYVRENPGEVCPAKWEEGGETL 177 (187)
T ss_dssp HHHHHHHHHHHHTSTTCCC-----------
T ss_pred HHHHHHHHhhhhhCCCcccccccccCCcee
Confidence 8888888774 689999999999986
No 18
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=100.00 E-value=4.5e-38 Score=230.16 Aligned_cols=148 Identities=21% Similarity=0.350 Sum_probs=134.3
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCC--CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSF--PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAIL 78 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~--~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~v 78 (181)
|+++|++||+|+++ |.+| ++++|+++ +||++||+||+++|||+|+.+++.|++++++|++.|+.+
T Consensus 4 ml~vG~~aPdF~l~---------~~~G----~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~v 70 (164)
T 4gqc_A 4 LVELGEKAPDFTLP---------NQDF----EPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEV 70 (164)
T ss_dssp CCCTTSBCCCCEEE---------BTTS----CEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEE
T ss_pred cccCCCCCcCcEeE---------CCCC----CEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceE
Confidence 78999999999999 8999 99999998 899999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC-CC-C---CcceeeEEEEcCCCcEEEEEeccCCC-CC
Q psy2878 79 LGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR-HE-T---GVALRATFIFDPQNIIQHITVNNLNV-GR 152 (181)
Q Consensus 79 i~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~-~~-~---g~~~p~~~liD~~g~i~~~~~~~~~~-~~ 152 (181)
++||.|+++.+++|++++ +++||+++|+++++++.||++ .. . +.+.|++||||++|+|++++++.... ..
T Consensus 71 v~is~d~~~~~~~~~~~~----~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~ 146 (164)
T 4gqc_A 71 LAISVDSPWCLKKFKDEN----RLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEP 146 (164)
T ss_dssp EEEESSCHHHHHHHHHHT----TCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCC
T ss_pred EEecCCCHHHHHHHHHhc----CcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCC
Confidence 999999999999999998 999999999999999999997 22 1 24578999999999999999754443 44
Q ss_pred CHHHHHHHHHhhc
Q psy2878 153 NPIETLRILDAIQ 165 (181)
Q Consensus 153 ~~~~ll~~l~~l~ 165 (181)
+.++++++++++.
T Consensus 147 ~~~eil~~l~~l~ 159 (164)
T 4gqc_A 147 DYDEVVREANKIA 159 (164)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 7999999998874
No 19
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=100.00 E-value=6.8e-37 Score=237.35 Aligned_cols=166 Identities=25% Similarity=0.467 Sum_probs=147.8
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeec-CCC--CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITE-SSF--PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l-~~~--~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~ 77 (181)
|+.+|+.+|+|++. +.+| +++| +++ +||++||+||+++|||+|+.+++.|++++++|+++|++
T Consensus 4 ~~~iG~~aPdF~l~---------~~~G-----~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~ 69 (249)
T 3a2v_A 4 IPLIGERFPEMEVT---------TDHG-----VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVD 69 (249)
T ss_dssp ECCTTSBCCCEEEE---------ETTE-----EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEE
T ss_pred cCCCCCCCCCeEEE---------cCCC-----CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcE
Confidence 57899999999999 7777 4999 999 99999999988999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHHHcCC--CcccceeEEEcCCchHHHHhCCC-CCCCc-ceeeEEEEcCCCcEEEEEeccCCCCCC
Q psy2878 78 LLGGSSDNEFVKLAWRRENSN--LYKLNHWQFSDTNGSLIDQLGIR-HETGV-ALRATFIFDPQNIIQHITVNNLNVGRN 153 (181)
Q Consensus 78 vi~Is~d~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~gv~-~~~g~-~~p~~~liD~~g~i~~~~~~~~~~~~~ 153 (181)
||+||.|+.+.+.+|.+.... ..+++||+++|++.++++.||+. ...|. ..|++||||++|+|++++.+..+.+++
T Consensus 70 VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~ 149 (249)
T 3a2v_A 70 LIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRL 149 (249)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCC
T ss_pred EEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccch
Confidence 999999999999999885321 12789999999999999999998 44454 689999999999999999877777889
Q ss_pred HHHHHHHHHhhc----cCCccccCCCC-----CCCCC
Q psy2878 154 PIETLRILDAIQ----TGKLCACNRTL-----NGKTL 181 (181)
Q Consensus 154 ~~~ll~~l~~l~----~~~~~~~~~~~-----~~~~~ 181 (181)
.+++++.|+++| ++..||+|| + |++||
T Consensus 150 ~~Ellr~I~alq~~~~~~~~~Pa~W-~~~~~~g~~~~ 185 (249)
T 3a2v_A 150 VDEILRIVKALKLGDSLKRAVPADW-PNNEIIGEGLI 185 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTCBBCTTT-TSBTTTBTCEE
T ss_pred hHHHHHHHHHHHhccccCccCCCCC-CCCCCCCCCee
Confidence 999999999998 478999999 9 88874
No 20
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=100.00 E-value=3.1e-36 Score=225.05 Aligned_cols=168 Identities=36% Similarity=0.648 Sum_probs=143.5
Q ss_pred ccCccCCCcEEecccCCCCCCCC--CcccceeeeecCCC-CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEE--NNVSAFKVITESSF-PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~~~~l~~~-~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi 79 (181)
++|+++|+|+++ +. +| .+++++|+++ +||++||+||+++||++|+.+++.|++++++|++.+++||
T Consensus 1 ~~G~~aP~f~l~---------~~~~~G--~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv 69 (192)
T 2h01_A 1 AFQGQAPSFKAE---------AVFGDN--TFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELL 69 (192)
T ss_dssp CCSSBCCCCEEE---------EECTTS--CEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEE
T ss_pred CCCCcCCCcEeE---------eeecCC--ceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 479999999999 66 55 2358999999 9999999999899999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHHcCC---CcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHH
Q psy2878 80 GGSSDNEFVKLAWRRENSN---LYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIE 156 (181)
Q Consensus 80 ~Is~d~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ 156 (181)
+||.|+.+.+++|++++.. ..+++|++++|++.++++.||+....|+..|++||||++|+|++++.+......+.++
T Consensus 70 ~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~ 149 (192)
T 2h01_A 70 GCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDE 149 (192)
T ss_dssp EEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHH
T ss_pred EEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHH
Confidence 9999999999999987532 2268899999999999999998633355689999999999999999765556678899
Q ss_pred HHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 157 TLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 157 ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
+++.|++++ .+..||++|++|+++|
T Consensus 150 l~~~l~~l~~~~~~~~~cp~~w~~~~~~~ 178 (192)
T 2h01_A 150 ILRLIDALQHHEKYGDVCPANWQKGKESM 178 (192)
T ss_dssp HHHHHHHHHHHHHHCCCCCSSCCCC----
T ss_pred HHHHHHHHhhhhhcCCCccCCCCCCCccc
Confidence 999999887 5789999999999875
No 21
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=100.00 E-value=1.3e-35 Score=222.32 Aligned_cols=178 Identities=41% Similarity=0.713 Sum_probs=136.6
Q ss_pred CccCccCCCcEEecccCCCCCC----CCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLP----EENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~----d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~ 77 (181)
+.+|+.+|+|++++..+++.+. +.+| .++++++++++||++||+||+++||++|+.+++.|++++++|++++++
T Consensus 4 l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G--~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~ 81 (195)
T 2bmx_A 4 LTIGDQFPAYQLTALIGGDLSKVDAKQPGD--YFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQ 81 (195)
T ss_dssp CCTTCBCCCCEEEEECSSCGGGSCCSSGGG--GEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEE
T ss_pred CCCCCcCCCcCcccccccccccccccccCC--CccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCE
Confidence 6899999999999432100000 0002 126899999999999999998999999999999999999999998999
Q ss_pred EEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 78 LLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 78 vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
+++||.|+.+.+++|++++....+++|++++|++.++++.|++....|...|++||||++|+|++++.+......+.+++
T Consensus 82 vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l 161 (195)
T 2bmx_A 82 ILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEV 161 (195)
T ss_dssp EEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHH
T ss_pred EEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHH
Confidence 99999999999999999865555889999999999999999997225557899999999999999997655556689999
Q ss_pred HHHHHhhccCCccccCCCCCCCCC
Q psy2878 158 LRILDAIQTGKLCACNRTLNGKTL 181 (181)
Q Consensus 158 l~~l~~l~~~~~~~~~~~~~~~~~ 181 (181)
++.|++++.+..||++|.+|++++
T Consensus 162 ~~~l~~l~~~~~~p~~w~~~~~~~ 185 (195)
T 2bmx_A 162 LRVLDALQSDELCASNWRKGDPTL 185 (195)
T ss_dssp HHHHHHHHC---------------
T ss_pred HHHHHHHhhCCCcCcccccCCccc
Confidence 999999999999999999999875
No 22
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=100.00 E-value=1.1e-35 Score=222.95 Aligned_cols=167 Identities=31% Similarity=0.547 Sum_probs=138.3
Q ss_pred CccCccCCCcEEecccCCCCCCCC--Cccccee---eeecCCC-CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcC
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEE--NNVSAFK---VITESSF-PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERN 75 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~---~~~l~~~-~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~ 75 (181)
+.+|+++|+|+++ |. +| + +++|+++ +||++||+||+++||++|+.+++.|++++++|++.+
T Consensus 1 ~~~G~~~P~f~l~---------~~~~~G----~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~ 67 (198)
T 1zof_A 1 MVVTKLAPDFKAP---------AVLGNN----EVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKG 67 (198)
T ss_dssp CCTTSBCCCCEEE---------EECTTS----CEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTT
T ss_pred CCCCCcCCceEee---------cccCCC----cccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC
Confidence 4689999999999 77 88 8 9999999 999999999989999999999999999999999999
Q ss_pred cEEEEEecCCHHHHHHHHHHcCC---CcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCC
Q psy2878 76 AILLGGSSDNEFVKLAWRRENSN---LYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGR 152 (181)
Q Consensus 76 ~~vi~Is~d~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~ 152 (181)
+++++||.|+++.+++|+++... ..+++|+++.|++.++++.||+....|...|++||||++|+|++++.+......
T Consensus 68 v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~ 147 (198)
T 1zof_A 68 FNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGR 147 (198)
T ss_dssp EEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCC
T ss_pred CEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCC
Confidence 99999999999999999987211 138899999999999999999862235568999999999999999976555566
Q ss_pred CHHHHHHHHHhhc----cCCccccCCCCCCCCC
Q psy2878 153 NPIETLRILDAIQ----TGKLCACNRTLNGKTL 181 (181)
Q Consensus 153 ~~~~ll~~l~~l~----~~~~~~~~~~~~~~~~ 181 (181)
+.+++++.|++++ ++..||++|.+|++++
T Consensus 148 ~~~~l~~~l~~l~~~~~~~~~~p~~w~~~~~~~ 180 (198)
T 1zof_A 148 NADEMLRMVDALLHFEEHGEVCPAGWRKGDKGM 180 (198)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCCC----------
T ss_pred CHHHHHHHHHHHHHhhccCCccCCcCcCCCccc
Confidence 7889999998887 6789999999999875
No 23
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=100.00 E-value=9.2e-34 Score=205.97 Aligned_cols=149 Identities=26% Similarity=0.390 Sum_probs=135.2
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCe-EEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKW-KIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~-~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi 79 (181)
|+++|+++|+|++. |.+| +++++++++||+ +||+||+++||++|+.+++.|++++++|+++|+++|
T Consensus 1 ml~~G~~~P~f~l~---------~~~G----~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv 67 (161)
T 3drn_A 1 MVKVGDKAPLFEGI---------ADNG----EKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVI 67 (161)
T ss_dssp -CCTTSBCCCCEEE---------ETTS----CEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEE
T ss_pred CCCCCCcCCCeEee---------cCCC----CEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEE
Confidence 79999999999999 8999 999999999997 999999899999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHH
Q psy2878 80 GGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLR 159 (181)
Q Consensus 80 ~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~ 159 (181)
+||.|+++.+++|++++ +++|++++|.+.++++.||+... ..+.|++||||++|+|++.+.+........+++++
T Consensus 68 ~vs~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~~~-~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~ 142 (161)
T 3drn_A 68 GVSSDDINSHKRFKEKY----KLPFILVSDPDKKIRELYGAKGF-ILPARITFVIDKKGIIRHIYNSQMNPANHVNEALK 142 (161)
T ss_dssp EEESCCHHHHHHHHHHT----TCCSEEEECTTSHHHHHTTCCCS-SSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHh----CCCceEEECCcHHHHHHcCCCCc-CcccceEEEECCCCEEEEEEecCCCCCcCHHHHHH
Confidence 99999999999999998 89999999999999999999711 23478999999999999999754566678899999
Q ss_pred HHHhhccC
Q psy2878 160 ILDAIQTG 167 (181)
Q Consensus 160 ~l~~l~~~ 167 (181)
.|++++.+
T Consensus 143 ~l~~l~~~ 150 (161)
T 3drn_A 143 ALKQIKEE 150 (161)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhhh
Confidence 99999854
No 24
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=100.00 E-value=1.2e-33 Score=205.17 Aligned_cols=147 Identities=22% Similarity=0.330 Sum_probs=132.9
Q ss_pred CccCccCCCcE--EecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q psy2878 2 KTIGQSLSSYR--VIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79 (181)
Q Consensus 2 l~~G~~~P~f~--l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi 79 (181)
+.+|+++|+|+ +. |.+| +++++++++||++||+||.++|||+|+.+++.|++++++|+++|+++|
T Consensus 7 l~~G~~~P~f~~~l~---------~~~G----~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv 73 (163)
T 3gkn_A 7 AVLELPAATFDLPLS---------LSGG----TQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKIL 73 (163)
T ss_dssp CCCCCCGGGGGCCEE---------CSTT----CEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cccCCcCCCcccccc---------CCCC----CEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEE
Confidence 67999999999 99 8999 999999999999999999779999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC-CC--CCc----ceeeEEEEcCCCcEEEEEeccCCCCC
Q psy2878 80 GGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR-HE--TGV----ALRATFIFDPQNIIQHITVNNLNVGR 152 (181)
Q Consensus 80 ~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~-~~--~g~----~~p~~~liD~~g~i~~~~~~~~~~~~ 152 (181)
+||.|+++.+++|++++ +++|++++|++.++++.||+. .. .|. +.|++||||++|+|++.+ .+.....
T Consensus 74 ~vs~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~-~~~~~~~ 148 (163)
T 3gkn_A 74 GVSRDSVKSHDNFCAKQ----GFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAW-RKVKVAG 148 (163)
T ss_dssp EEESSCHHHHHHHHHHH----CCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEE-CSCCSTT
T ss_pred EEeCCCHHHHHHHHHHh----CCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEE-cCCCccc
Confidence 99999999999999998 899999999999999999997 11 111 178999999999999999 5566667
Q ss_pred CHHHHHHHHHhhcc
Q psy2878 153 NPIETLRILDAIQT 166 (181)
Q Consensus 153 ~~~~ll~~l~~l~~ 166 (181)
+.+++++.|++++.
T Consensus 149 ~~~~il~~l~~l~~ 162 (163)
T 3gkn_A 149 HADAVLAALKAHAK 162 (163)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHhc
Confidence 88999999998763
No 25
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=100.00 E-value=7.6e-34 Score=210.18 Aligned_cols=148 Identities=26% Similarity=0.355 Sum_probs=133.3
Q ss_pred CCccCcc----CCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCc
Q psy2878 1 MKTIGQS----LSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNA 76 (181)
Q Consensus 1 ~l~~G~~----~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~ 76 (181)
++++|+. +|+|+++ |.+| ++++|++++||++||+||+++||++|+.+++.|++++++|+++|+
T Consensus 20 ~l~~Gd~ig~~aP~f~l~---------~~~G----~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~ 86 (179)
T 3ixr_A 20 HMNIGDTLNHSLLNHPLM---------LSGS----TCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINA 86 (179)
T ss_dssp SSCTTCBCCHHHHHCCEE---------EGGG----EEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTE
T ss_pred ccCcCcccCCcCCCeeEE---------CCCC----CEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCC
Confidence 4678888 9999999 8999 999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC-CC--CCc----ceeeEEEEcCCCcEEEEEeccCC
Q psy2878 77 ILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR-HE--TGV----ALRATFIFDPQNIIQHITVNNLN 149 (181)
Q Consensus 77 ~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~-~~--~g~----~~p~~~liD~~g~i~~~~~~~~~ 149 (181)
+|++||.|+++.+++|++++ +++|++++|++.++++.||++ .. .|. +.|++||||++|+|++.+ .+..
T Consensus 87 ~vv~Vs~D~~~~~~~~~~~~----~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~-~~~~ 161 (179)
T 3ixr_A 87 TVLGVSRDSVKSHDSFCAKQ----GFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAW-RQVK 161 (179)
T ss_dssp EEEEEESCCHHHHHHHHHHH----TCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEE-CSCC
T ss_pred EEEEEcCCCHHHHHHHHHHc----CCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEE-cCCC
Confidence 99999999999999999998 999999999999999999997 21 121 368999999999999999 4556
Q ss_pred CCCCHHHHHHHHHhhcc
Q psy2878 150 VGRNPIETLRILDAIQT 166 (181)
Q Consensus 150 ~~~~~~~ll~~l~~l~~ 166 (181)
...+.+++++.|++++.
T Consensus 162 ~~~~~~~il~~l~~l~~ 178 (179)
T 3ixr_A 162 VPGHAEEVLNKLKAHAE 178 (179)
T ss_dssp STTHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhc
Confidence 67789999999998764
No 26
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=100.00 E-value=3.5e-33 Score=203.92 Aligned_cols=144 Identities=22% Similarity=0.268 Sum_probs=130.0
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++.+|+++|+|+++ |.+| ++++|++++||++||+||+++||++|+.+++.|++++++ .++++++
T Consensus 19 ~l~~G~~aP~f~l~---------~~~G----~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~ 82 (166)
T 3p7x_A 19 QINEGDFAPDFTVL---------DNDL----NQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLT 82 (166)
T ss_dssp CCCTTSBCCCCEEE---------CTTS----CEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEE
T ss_pred cCCCCCCCCCeEEE---------cCCC----CEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEE
Confidence 36799999999999 8999 999999999999999999999999999999999999988 6899999
Q ss_pred EecCCHHHHHHHHHHcCCCccc-ceeEEEcC-CchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEecc-CCCCCCHHH
Q psy2878 81 GSSDNEFVKLAWRRENSNLYKL-NHWQFSDT-NGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNN-LNVGRNPIE 156 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~~~~~-~~~~~~D~-~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~-~~~~~~~~~ 156 (181)
||.|+++.+++|++++ ++ +|++++|+ +.++++.||+. ...|.+.|++||||++|+|++++... .....+.++
T Consensus 83 is~d~~~~~~~~~~~~----~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ 158 (166)
T 3p7x_A 83 ISADLPFAQKRWCASA----GLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDA 158 (166)
T ss_dssp EESSCHHHHHHHHHHH----TCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHH
T ss_pred EECCCHHHHHHHHHHc----CCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHH
Confidence 9999999999999998 88 89999999 89999999998 45566689999999999999998643 334568899
Q ss_pred HHHHHHhh
Q psy2878 157 TLRILDAI 164 (181)
Q Consensus 157 ll~~l~~l 164 (181)
++++|+++
T Consensus 159 il~~l~~l 166 (166)
T 3p7x_A 159 ALAAYKNI 166 (166)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999864
No 27
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=100.00 E-value=4.1e-33 Score=205.52 Aligned_cols=146 Identities=17% Similarity=0.335 Sum_probs=128.8
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCC-CCCCeEEEEEeeCCCCCCCh-hHHHHHHHHHHHHHhcCcEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESS-FPGKWKIFYFYPKDFTFVCP-TEISEYNKLVKDFNERNAILL 79 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~-~~gk~~ll~F~~~~~cp~C~-~~~~~l~~l~~~~~~~~~~vi 79 (181)
+.+|+++|+|+++. +.+| ++++|++ ++||++||+||+++|||+|+ .|++.|++++++|+++|+++|
T Consensus 15 ~~vG~~aPdf~l~~--------~~~g----~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv 82 (173)
T 3mng_A 15 IKVGDAIPAVEVFE--------GEPG----NKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVV 82 (173)
T ss_dssp CCTTCBCCCCEEEC--------SSTT----CEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEE
T ss_pred CCCCCCCCCeEeee--------CCCC----CEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 67999999999983 5788 9999999 59999999999999999999 599999999999999999999
Q ss_pred E-EecCCHHHHHHHHHHcCCCcccc--eeEEEcCCchHHHHhCCC-CCC-----C--cceeeEEEEcCCCcEEEEEeccC
Q psy2878 80 G-GSSDNEFVKLAWRRENSNLYKLN--HWQFSDTNGSLIDQLGIR-HET-----G--VALRATFIFDPQNIIQHITVNNL 148 (181)
Q Consensus 80 ~-Is~d~~~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~gv~-~~~-----g--~~~p~~~liD~~g~i~~~~~~~~ 148 (181)
+ ||.|+++.+++|++++ +++ |++++|+++++++.||+. ... | .+.|++|||| +|+|++.++++.
T Consensus 83 ~~iS~D~~~~~~~f~~~~----~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~ 157 (173)
T 3mng_A 83 ACLSVNDAFVTGEWGRAH----KAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPD 157 (173)
T ss_dssp EEEESSCHHHHHHHHHHT----TCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTT
T ss_pred EEEcCCCHHHHHHHHHHh----CCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCC
Confidence 7 9999999999999998 777 999999999999999998 321 2 3679999999 999999999777
Q ss_pred CCCCCHHHHHHHHHhh
Q psy2878 149 NVGRNPIETLRILDAI 164 (181)
Q Consensus 149 ~~~~~~~~ll~~l~~l 164 (181)
+.+++..++.+.|++|
T Consensus 158 ~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 158 GTGLTCSLAPNIISQL 173 (173)
T ss_dssp SSCSSTTSHHHHHHHC
T ss_pred CCCcchHHHHHHHHhC
Confidence 7777777766666643
No 28
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=100.00 E-value=9.9e-33 Score=200.98 Aligned_cols=144 Identities=22% Similarity=0.308 Sum_probs=129.5
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+.+|+|+++ |.+| +++++++++||++||+||+++||++|+.+++.|++++++| .++++++|
T Consensus 16 ~~~G~~~P~f~l~---------~~~G----~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~i 80 (163)
T 1psq_A 16 LQVGDKALDFSLT---------TTDL----SKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTV 80 (163)
T ss_dssp CCTTSBCCCCEEE---------CTTS----CEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEE
T ss_pred CCCCCCCCCEEEE---------cCCC----cEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEE
Confidence 6789999999999 8999 9999999999999999998899999999999999999999 68999999
Q ss_pred ecCCHHHHHHHHHHcCCCccc-ceeEEEc-CCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEecc-CCCCCCHHHH
Q psy2878 82 SSDNEFVKLAWRRENSNLYKL-NHWQFSD-TNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNN-LNVGRNPIET 157 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~-~~~~~~~~~l 157 (181)
|.|+++.+++|++++ ++ +|++++| +++++++.||+. ...|++.|++||||++|+|++.+.+. .....+.+++
T Consensus 81 s~d~~~~~~~~~~~~----~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~ 156 (163)
T 1psq_A 81 SMDLPFAQKRWCGAE----GLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAA 156 (163)
T ss_dssp ESSCHHHHHHHHHHH----TCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHH
T ss_pred ECCCHHHHHHHHHhc----CCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHH
Confidence 999999999999998 88 9999999 899999999997 33466679999999999999999743 2345678999
Q ss_pred HHHHHhh
Q psy2878 158 LRILDAI 164 (181)
Q Consensus 158 l~~l~~l 164 (181)
++.|+++
T Consensus 157 l~~l~~l 163 (163)
T 1psq_A 157 IAAAKAL 163 (163)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999864
No 29
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=100.00 E-value=2e-32 Score=206.18 Aligned_cols=143 Identities=24% Similarity=0.379 Sum_probs=128.0
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++++|+++|+|+++ |.+| ++++|++++||++||+||+++||++|+.+++.|++++++| .+++||+
T Consensus 51 ~l~~G~~aPdf~l~---------d~~G----~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~ 115 (200)
T 3zrd_A 51 LPQIGDKAKDFTLV---------AKDL----SDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLC 115 (200)
T ss_dssp CCCTTCBCCCCEEE---------CTTS----CEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEE
T ss_pred cCCCCCCCCCeEEE---------CCCC----CEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEE
Confidence 47899999999999 8999 9999999999999999999999999999999999999999 6899999
Q ss_pred EecCCHHHHHHHHHHcCCCccc-ceeEEEcC-CchHHHHhCCC-CC---CCcceeeEEEEcCCCcEEEEEecc-CCCCCC
Q psy2878 81 GSSDNEFVKLAWRRENSNLYKL-NHWQFSDT-NGSLIDQLGIR-HE---TGVALRATFIFDPQNIIQHITVNN-LNVGRN 153 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~~~~~-~~~~~~D~-~~~~~~~~gv~-~~---~g~~~p~~~liD~~g~i~~~~~~~-~~~~~~ 153 (181)
||.|+++.+++|++++ ++ +|++++|+ +.++++.||+. .. .|++.|++||||++|+|++++... .....+
T Consensus 116 Is~D~~~~~~~~~~~~----~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~~~~~~~~~ 191 (200)
T 3zrd_A 116 ISSDLPFAQSRFCGAE----GLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPN 191 (200)
T ss_dssp EESSCHHHHTTCTTTT----TCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCC
T ss_pred EECCCHHHHHHHHHHc----CCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEecCCcccCCC
Confidence 9999999888888876 89 99999999 99999999997 32 455679999999999999999743 445667
Q ss_pred HHHHHHHHH
Q psy2878 154 PIETLRILD 162 (181)
Q Consensus 154 ~~~ll~~l~ 162 (181)
+++++++|+
T Consensus 192 ~~~~l~~Lk 200 (200)
T 3zrd_A 192 YDAALAALK 200 (200)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhC
Confidence 888888763
No 30
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=100.00 E-value=2.6e-32 Score=197.44 Aligned_cols=148 Identities=20% Similarity=0.380 Sum_probs=134.3
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCC-eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGK-WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk-~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi 79 (181)
|+.+|+.+|+|++. |.+| +++++++++|| ++||+||+++||++|+.+++.|+++++++++.+++++
T Consensus 8 ~~~~G~~~p~f~l~---------~~~G----~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv 74 (160)
T 1xvw_A 8 MLNVGATAPDFTLR---------DQNQ----QLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAAL 74 (160)
T ss_dssp CCCTTSBCCCCEEE---------CTTS----CEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEE
T ss_pred CCCCCCCCCCeEeE---------cCCC----CEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEE
Confidence 57899999999999 8999 99999999998 9999999899999999999999999999988899999
Q ss_pred EEecCCHHHHHHHHHHcCCCcccceeEEEcC--CchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHH
Q psy2878 80 GGSSDNEFVKLAWRRENSNLYKLNHWQFSDT--NGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIE 156 (181)
Q Consensus 80 ~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ 156 (181)
+||.|+.+.+++|++++ +++|+++.|. +.++++.||+. ...+++.|++||||++|+|++++.+........++
T Consensus 75 ~is~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 150 (160)
T 1xvw_A 75 AISVGPPPTHKIWATQS----GFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRL 150 (160)
T ss_dssp EEESCCHHHHHHHHHHH----TCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHH
T ss_pred EEeCCCHHHHHHHHHhc----CCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHH
Confidence 99999999999999998 8899999995 89999999987 43466666999999999999999765555668999
Q ss_pred HHHHHHhhc
Q psy2878 157 TLRILDAIQ 165 (181)
Q Consensus 157 ll~~l~~l~ 165 (181)
++++|++++
T Consensus 151 l~~~l~~l~ 159 (160)
T 1xvw_A 151 WTDALAALT 159 (160)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 999999876
No 31
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=100.00 E-value=2.3e-32 Score=199.48 Aligned_cols=141 Identities=23% Similarity=0.375 Sum_probs=125.1
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+.+|+|+++ |.+| ++++|++++||++||+||+++||++|+.+++.|++++++| .+++||+|
T Consensus 17 ~~~G~~~P~f~l~---------~~~G----~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~I 81 (165)
T 1q98_A 17 PQVGEIVENFILV---------GNDL----ADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCI 81 (165)
T ss_dssp CCTTCBCCCCEEE---------CTTS----CEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEE
T ss_pred CCCCCCCCCeEEE---------CCCC----CEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEE
Confidence 6789999999999 8999 9999999999999999998999999999999999999999 68999999
Q ss_pred ecCCHHHHHHHHHHcCCCccc-ceeEEEcC-CchHHHHhCCC-CC---CCcceeeEEEEcCCCcEEEEEec-cCCCCCCH
Q psy2878 82 SSDNEFVKLAWRRENSNLYKL-NHWQFSDT-NGSLIDQLGIR-HE---TGVALRATFIFDPQNIIQHITVN-NLNVGRNP 154 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~~~~~~-~~~~~~D~-~~~~~~~~gv~-~~---~g~~~p~~~liD~~g~i~~~~~~-~~~~~~~~ 154 (181)
|.|+++.+++|++++ ++ +|++++|+ +.++++.||+. .. .|.+.|++||||++|+|++.+.+ ......++
T Consensus 82 s~d~~~~~~~~~~~~----~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~ 157 (165)
T 1q98_A 82 SADLPFAQARFCGAE----GIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNY 157 (165)
T ss_dssp ESSCHHHHTTCTTTT----TCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCH
T ss_pred eCCCHHHHHHHHHHc----CCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeCCCCCCCCCH
Confidence 999998888888876 88 79999998 89999999997 22 34557999999999999999973 34456788
Q ss_pred HHHHHHH
Q psy2878 155 IETLRIL 161 (181)
Q Consensus 155 ~~ll~~l 161 (181)
++++++|
T Consensus 158 ~~~l~~l 164 (165)
T 1q98_A 158 EAALAVL 164 (165)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 8888765
No 32
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.9e-32 Score=206.89 Aligned_cols=156 Identities=12% Similarity=0.089 Sum_probs=133.4
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCe-EEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKW-KIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~-~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi 79 (181)
++++|+++|+|+++ |.+| ++++|++++||+ +||+|| ++|||+|+.+++.|++++++|++++++||
T Consensus 31 ~l~~G~~aP~f~l~---------~~~G----~~v~l~~~~gk~~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv 96 (218)
T 3u5r_E 31 SITLGTRAADFVLP---------DAGG----NLFTLAEFKDSPALLVAFI-SNRCPFVVLIREALAKFAGDYAGQGLAVV 96 (218)
T ss_dssp CCCTTCBCCCCCEE---------CTTC----CEECGGGGTTCSEEEEEEC-CSSCHHHHTTHHHHHHHHHHHTTTTEEEE
T ss_pred cCCCCCcCCCcEeE---------CCCC----CEEeHHHhCCCCeEEEEEE-CCCCccHHHHHHHHHHHHHHHHhCCcEEE
Confidence 37899999999999 8999 999999999996 888887 78999999999999999999999999999
Q ss_pred EEec--------CCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCC--
Q psy2878 80 GGSS--------DNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLN-- 149 (181)
Q Consensus 80 ~Is~--------d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~-- 149 (181)
+|+. |+++.+++|++++ +++|+++.|.+.++++.|++. ..|++||||++|+|+++......
T Consensus 97 ~Vs~d~~~~~~~d~~~~~~~~~~~~----~~~~~~l~D~~~~~~~~~~v~-----~~P~~~liD~~G~i~~~g~~d~~~~ 167 (218)
T 3u5r_E 97 AINSNDAQAFPEETLERVGAEVKAY----GYGFPYLKDASQSVAKAYGAA-----CTPDFFLYDRERRLVYHGQFDDARP 167 (218)
T ss_dssp EEECSCTTTCGGGSHHHHHHHHHHH----TCCSCEEECTTCHHHHHHTCC-----EESEEEEECTTCBEEEEECSSSCCT
T ss_pred EEECCcccccccCCHHHHHHHHHHh----CCCccEEECCccHHHHHcCCC-----CCCeEEEECCCCcEEEecccccccc
Confidence 9999 6788999999998 899999999999999999997 67899999999999988642211
Q ss_pred ---CCCCHHHHHHHHHhhccC----------CccccCCCCCCC
Q psy2878 150 ---VGRNPIETLRILDAIQTG----------KLCACNRTLNGK 179 (181)
Q Consensus 150 ---~~~~~~~ll~~l~~l~~~----------~~~~~~~~~~~~ 179 (181)
.....+++.++|+++..+ .+|+++|++|++
T Consensus 168 ~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~GC~i~w~~~~~ 210 (218)
T 3u5r_E 168 GNGKDVTGADLRAAVDAVLKGKDVGTTQVPSIGCNIKWTAGNE 210 (218)
T ss_dssp TSCCCCCCHHHHHHHHHHHTTCCCCSCCCCCEEEECCCCCC--
T ss_pred ccccccCHHHHHHHHHHHHcCCCCCcCCcCCCCeeEEeCCCCC
Confidence 123456777777766532 479999998865
No 33
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.98 E-value=1.6e-31 Score=203.58 Aligned_cols=143 Identities=15% Similarity=0.078 Sum_probs=127.8
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCCh-----hHHHHHHHHHHHHHhcC
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCP-----TEISEYNKLVKDFNERN 75 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~-----~~~~~l~~l~~~~~~~~ 75 (181)
++.+|+++|+|+++ |.+| ++++|++++||++||+||++.|||+|+ .+++.|+++ | .|
T Consensus 21 ~l~vG~~APdFtL~---------d~~G----~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~g 82 (224)
T 3keb_A 21 FPRKGDYLPSFMLV---------DDQK----HDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PH 82 (224)
T ss_dssp CCCTTCBCCCCEEE---------ETTS----CEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TT
T ss_pred cCCCCCCCCCeEEE---------CCCC----CEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CC
Confidence 47899999999999 8899 999999999999999999888899999 999998887 4 68
Q ss_pred cEEEEEecCCHHHHHHHHHHcCCCccc-ceeEEEcC-CchHHHHhCCC-CC---CCcceeeEEEEcCCCcEEEEEeccCC
Q psy2878 76 AILLGGSSDNEFVKLAWRRENSNLYKL-NHWQFSDT-NGSLIDQLGIR-HE---TGVALRATFIFDPQNIIQHITVNNLN 149 (181)
Q Consensus 76 ~~vi~Is~d~~~~~~~~~~~~~~~~~~-~~~~~~D~-~~~~~~~~gv~-~~---~g~~~p~~~liD~~g~i~~~~~~~~~ 149 (181)
+.||+||.|+++.+++|++++ ++ +|++++|+ ++++++.||+. .. .|++.|++||||++|+|++++.....
T Consensus 83 v~VvgIS~Ds~~~~~~f~~~~----gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~ 158 (224)
T 3keb_A 83 LKLIVITVDSPSSLARARHEH----GLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANT 158 (224)
T ss_dssp SEEEEEESSCHHHHHHHHHHH----CCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBT
T ss_pred CEEEEEECCCHHHHHHHHHHc----CCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCC
Confidence 999999999999999999998 88 69999998 69999999998 32 46678999999999999999974433
Q ss_pred -CCCCHHHHHHHHHhhc
Q psy2878 150 -VGRNPIETLRILDAIQ 165 (181)
Q Consensus 150 -~~~~~~~ll~~l~~l~ 165 (181)
...+.++++++|++++
T Consensus 159 ~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 159 RDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp TCCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhh
Confidence 3568999999999886
No 34
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.98 E-value=9.7e-32 Score=197.05 Aligned_cols=144 Identities=17% Similarity=0.209 Sum_probs=128.7
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++.+|+++|+|++. |.+| +++++++++||++||+||+++|||+|+.+++.|++++++| .++++|+
T Consensus 20 ~l~~g~~~P~f~l~---------~~~G----~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~ 84 (171)
T 2yzh_A 20 ELKVGDRAPEAVVV---------TKDL----QEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTV 84 (171)
T ss_dssp CCCTTSBCCCEEEE---------ETTS----CEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEE
T ss_pred cCCCCCcCCceEEE---------CCCC----CEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEE
Confidence 36789999999999 8999 9999999999999999998999999999999999999999 6899999
Q ss_pred EecCCHHHHHHHHHHcCCCccc-ceeEEEc-CCchHHHHhCCC-CC---CCcceeeEEEEcCCCcEEEEEecc-CCCCCC
Q psy2878 81 GSSDNEFVKLAWRRENSNLYKL-NHWQFSD-TNGSLIDQLGIR-HE---TGVALRATFIFDPQNIIQHITVNN-LNVGRN 153 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~gv~-~~---~g~~~p~~~liD~~g~i~~~~~~~-~~~~~~ 153 (181)
||.|+++.+++|++++ ++ +|++++| ++.++ +.||+. .. .|++.|++||||++|+|++++.+. .....+
T Consensus 85 Is~d~~~~~~~~~~~~----~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~ 159 (171)
T 2yzh_A 85 VSMDLPFAQKRFCESF----NIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPN 159 (171)
T ss_dssp EESSCHHHHHHHHHHT----TCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCC
T ss_pred EeCCCHHHHHHHHHHc----CCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCC
Confidence 9999999999999987 88 8999999 88999 999997 22 355679999999999999999642 234567
Q ss_pred HHHHHHHHHhh
Q psy2878 154 PIETLRILDAI 164 (181)
Q Consensus 154 ~~~ll~~l~~l 164 (181)
.+++++.|+++
T Consensus 160 ~~~ll~~l~~l 170 (171)
T 2yzh_A 160 YDEVVNKVKEL 170 (171)
T ss_dssp CHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 89999999875
No 35
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.8e-31 Score=198.51 Aligned_cols=143 Identities=15% Similarity=0.245 Sum_probs=122.7
Q ss_pred CCccCccCCCcEEecccCCCCCCCC--CcccceeeeecCC-CCCCeEEEEEeeCCCCCCChh-HHHHHHHHHHHHHhcCc
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEE--NNVSAFKVITESS-FPGKWKIFYFYPKDFTFVCPT-EISEYNKLVKDFNERNA 76 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~~~~l~~-~~gk~~ll~F~~~~~cp~C~~-~~~~l~~l~~~~~~~~~ 76 (181)
++++|+++|+|+++ +. +| +++++|++ ++||++||+||+++|||+|+. |++.|++++++|+++|+
T Consensus 25 ~l~vG~~aPdf~l~---------~~~~~G---~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv 92 (184)
T 3uma_A 25 TIAVGDKLPNATFK---------EKTADG---PVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGV 92 (184)
T ss_dssp CCCTTCBCCCCEEE---------EEETTE---EEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTC
T ss_pred cCCCCCCCCCcEee---------cccCCC---ceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCC
Confidence 37899999999999 54 43 26899999 899999999999999999999 79999999999999999
Q ss_pred E-EEEEecCCHHHHHHHHHHcCCCcccc--eeEEEcCCchHHHHhCCC-CC--CCc---ceeeEEEEcCCCcEEEEEecc
Q psy2878 77 I-LLGGSSDNEFVKLAWRRENSNLYKLN--HWQFSDTNGSLIDQLGIR-HE--TGV---ALRATFIFDPQNIIQHITVNN 147 (181)
Q Consensus 77 ~-vi~Is~d~~~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~gv~-~~--~g~---~~p~~~liD~~g~i~~~~~~~ 147 (181)
+ |++||.|+++.+++|++++ +++ |++++|+++++++.||+. .. .|+ +.|++|||| +|+|++.++++
T Consensus 93 ~~vv~Is~d~~~~~~~f~~~~----~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~ 167 (184)
T 3uma_A 93 DDIAVVAVNDLHVMGAWATHS----GGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEE 167 (184)
T ss_dssp CEEEEEESSCHHHHHHHHHHH----TCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECS
T ss_pred CEEEEEECCCHHHHHHHHHHh----CCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeC
Confidence 9 9999999999999999998 888 999999999999999997 21 232 468899997 99999999865
Q ss_pred CCCC---CCHHHHHHH
Q psy2878 148 LNVG---RNPIETLRI 160 (181)
Q Consensus 148 ~~~~---~~~~~ll~~ 160 (181)
.+.. ..++++++.
T Consensus 168 ~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 168 SPGQATASGAAAMLEL 183 (184)
T ss_dssp STTCCSTTSHHHHHHH
T ss_pred CCCCCcCCCHHHHHhh
Confidence 4332 456666654
No 36
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.97 E-value=3.3e-31 Score=194.24 Aligned_cols=144 Identities=17% Similarity=0.302 Sum_probs=123.1
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCC-CCCeEEEEEeeCCCCCCChh-HHHHHHHHHHHHHhcCc-E
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSF-PGKWKIFYFYPKDFTFVCPT-EISEYNKLVKDFNERNA-I 77 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~-~gk~~ll~F~~~~~cp~C~~-~~~~l~~l~~~~~~~~~-~ 77 (181)
++++|+++|+|+++. |.+| ++++|+++ +||++||+||+++|||+|+. +++.|++++++|+++|+ +
T Consensus 2 ~l~~G~~aP~f~l~~--------~~~G----~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~ 69 (167)
T 2wfc_A 2 PIKEGDKLPAVTVFG--------ATPN----DKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDI 69 (167)
T ss_dssp CCCTTCBCCCCEEES--------SSTT----CEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCE
T ss_pred CCCCCCcCCCcEeec--------CCCC----cEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
Confidence 378999999999982 5778 99999998 99999999999999999999 99999999999999999 9
Q ss_pred EEEEecCCHHHHHHHHHHcCCCcccc--eeEEEcCCchHHHHhCCC-CC---CC--cceeeEEEEcCCCcEEEEEeccCC
Q psy2878 78 LLGGSSDNEFVKLAWRRENSNLYKLN--HWQFSDTNGSLIDQLGIR-HE---TG--VALRATFIFDPQNIIQHITVNNLN 149 (181)
Q Consensus 78 vi~Is~d~~~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~gv~-~~---~g--~~~p~~~liD~~g~i~~~~~~~~~ 149 (181)
||+||.|+++.+++|++++ +++ |++++|+++++++.||+. .. .| .+.|++||| ++|+|+++++++.+
T Consensus 70 vv~Is~d~~~~~~~~~~~~----~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~~~~~ 144 (167)
T 2wfc_A 70 IACMAVNDSFVMDAWGKAH----GADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNVEPDG 144 (167)
T ss_dssp EEEEESSCHHHHHHHHHHT----TCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEECTTS
T ss_pred EEEEeCCCHHHHHHHHHhc----CCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEEecCCC
Confidence 9999999999999999998 787 999999999999999987 21 01 135899999 99999999976544
Q ss_pred CCCC---HHHHHHHH
Q psy2878 150 VGRN---PIETLRIL 161 (181)
Q Consensus 150 ~~~~---~~~ll~~l 161 (181)
...+ .+.+++.+
T Consensus 145 ~~~~~~~~~~~~~~~ 159 (167)
T 2wfc_A 145 KGLTCSLAPNILSQL 159 (167)
T ss_dssp SSSSTTSHHHHHHHH
T ss_pred CcceeccHHHHHHHh
Confidence 4333 45555444
No 37
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.97 E-value=6.3e-31 Score=191.46 Aligned_cols=144 Identities=17% Similarity=0.315 Sum_probs=122.0
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCC-CCCCeEEEEEeeCCCCCCCh-hHHHHHHHHHHHHHhcCcE-E
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESS-FPGKWKIFYFYPKDFTFVCP-TEISEYNKLVKDFNERNAI-L 78 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~-~~gk~~ll~F~~~~~cp~C~-~~~~~l~~l~~~~~~~~~~-v 78 (181)
+++|+.+|+|+++.. |.+| .+++++|++ ++||++||+||+++|||+|+ .+++.|++++++|+++|++ |
T Consensus 4 ~~~G~~aP~f~l~~~-------~~~G--~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~v 74 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYF-------DEQD--QLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEI 74 (162)
T ss_dssp CCTTCBCCCCEEEEE-------CTTS--CEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCE
T ss_pred CCCCCCCCCeEEEee-------cCCC--CceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 679999999998521 3444 225899999 89999999999999999999 9999999999999999999 9
Q ss_pred EEEecCCHHHHHHHHHHcCCCccc--ceeEEEcCCchHHHHhCCC-C--CCC---cceeeEEEEcCCCcEEEEEeccCCC
Q psy2878 79 LGGSSDNEFVKLAWRRENSNLYKL--NHWQFSDTNGSLIDQLGIR-H--ETG---VALRATFIFDPQNIIQHITVNNLNV 150 (181)
Q Consensus 79 i~Is~d~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~gv~-~--~~g---~~~p~~~liD~~g~i~~~~~~~~~~ 150 (181)
++||.|+++.+++|++++ ++ +|++++|+++++++.||+. . ..| .+.|++|||| +|+|++++.+. +.
T Consensus 75 v~Is~d~~~~~~~~~~~~----~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~-~~ 148 (162)
T 1tp9_A 75 LCISVNDPFVMKAWAKSY----PENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG-GG 148 (162)
T ss_dssp EEEESSCHHHHHHHHHTC----TTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS-SS
T ss_pred EEEECCCHHHHHHHHHhc----CCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC-CC
Confidence 999999999999999987 77 8999999999999999997 2 124 2478999999 99999999755 43
Q ss_pred C---CCHHHHHHH
Q psy2878 151 G---RNPIETLRI 160 (181)
Q Consensus 151 ~---~~~~~ll~~ 160 (181)
. .++++++++
T Consensus 149 ~~~~~~~~~vl~~ 161 (162)
T 1tp9_A 149 EFTVSSAEDILKD 161 (162)
T ss_dssp CCSSCSHHHHHTT
T ss_pred CCccCCHHHHHhh
Confidence 2 257777654
No 38
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.97 E-value=1.6e-30 Score=192.92 Aligned_cols=155 Identities=12% Similarity=0.092 Sum_probs=130.8
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++.+|+.+|+|++. |.+| +++++++++||++||+|| ++||+.|..+++.|+++++++.++ +.+++
T Consensus 6 ~~~~g~~~p~f~l~---------~~~G----~~~~l~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~ 70 (188)
T 2cvb_A 6 ELPLESPLIDAELP---------DPRG----GRYRLSQFHEPLLAVVFM-CNHCPYVKGSIGELVALAERYRGK-VAFVG 70 (188)
T ss_dssp CCCTTCBCCCCEEE---------CTTS----CEEEGGGCCSSEEEEEEE-CSSCHHHHTTHHHHHHHHHHTTTT-EEEEE
T ss_pred cCCCCCCCCCceee---------cCCC----CEEeHHHhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhhcC-eEEEE
Confidence 46799999999999 8999 999999999999999999 889999999999999999999987 99999
Q ss_pred Eec--------CCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccC----
Q psy2878 81 GSS--------DNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNL---- 148 (181)
Q Consensus 81 Is~--------d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~---- 148 (181)
|+. ++.+.+++|++++ +++|+++.|.+.++++.|++. ..|++||||++|+|+++.....
T Consensus 71 v~~d~~~~~~~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~g~~~~~~~~ 141 (188)
T 2cvb_A 71 INANDYEKYPEDAPEKMAAFAEEH----GIFFPYLLDETQEVAKAYRAL-----RTPEVFLFDERRLLRYHGRVNDNPKD 141 (188)
T ss_dssp EECCCTTTCGGGSHHHHHHHHHHH----TCCSCEEECSSSHHHHHTTCC-----EESEEEEECTTCBEEEEECSSSCTTC
T ss_pred EEcCccccccccCHHHHHHHHHHh----CCCceEEECCcchHHHHcCCC-----CCCeEEEECCCCcEEEEEecCCcccc
Confidence 998 5678899999988 899999999999999999987 6789999999999999842110
Q ss_pred CCCCCHHHHHHHHHhhcc----------CCccccCCCCCCC
Q psy2878 149 NVGRNPIETLRILDAIQT----------GKLCACNRTLNGK 179 (181)
Q Consensus 149 ~~~~~~~~ll~~l~~l~~----------~~~~~~~~~~~~~ 179 (181)
......+++.+.|+++.. +.+|+++|.+|+.
T Consensus 142 ~g~~~~~~l~~~i~~ll~~~~~~~~~~~~~gc~~~~~~~~~ 182 (188)
T 2cvb_A 142 PSKVQSHDLEAAIEALLRGEEPPLKEAPAIGCTIKWRPGNE 182 (188)
T ss_dssp GGGCCCCHHHHHHHHHHTTCCCCSSCCCCCSEECCCCTTCC
T ss_pred ccccCHHHHHHHHHHHHcCCCCCcccCCCCceEEEecCCCC
Confidence 011234556666655532 2479999999874
No 39
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.97 E-value=1.4e-30 Score=200.80 Aligned_cols=147 Identities=21% Similarity=0.375 Sum_probs=129.6
Q ss_pred CCccCccCCCcEEecccCCCCCCCC-Cccccee--eeecCC-CCCCeEEEEEeeCCCCCCCh-hHHHHHHHHHHHHHhcC
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEE-NNVSAFK--VITESS-FPGKWKIFYFYPKDFTFVCP-TEISEYNKLVKDFNERN 75 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~-~G~~~~~--~~~l~~-~~gk~~ll~F~~~~~cp~C~-~~~~~l~~l~~~~~~~~ 75 (181)
++.+|+++|+|+++ +. +| + +++|++ ++||++||+||+++|||+|+ .+++.|++++++|+++|
T Consensus 2 ~~~~G~~aP~f~l~---------~~~~g----~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~ 68 (241)
T 1nm3_A 2 SSMEGKKVPQVTFR---------TRQGD----KWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYG 68 (241)
T ss_dssp -CCTTSBCCCCEEE---------EEETT----EEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CccCCCCCCCeEEE---------cccCC----CceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC
Confidence 37899999999999 64 67 7 999999 89999999999999999999 99999999999999999
Q ss_pred c-EEEEEecCCHHHHHHHHHHcCCCcccc-eeEEEcCCchHHHHhCCC-CC--CCc---ceeeEEEEcCCCcEEEEEecc
Q psy2878 76 A-ILLGGSSDNEFVKLAWRRENSNLYKLN-HWQFSDTNGSLIDQLGIR-HE--TGV---ALRATFIFDPQNIIQHITVNN 147 (181)
Q Consensus 76 ~-~vi~Is~d~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~gv~-~~--~g~---~~p~~~liD~~g~i~~~~~~~ 147 (181)
+ +|++||.|+++.+++|++++ +++ |++++|+++++++.||+. .. .|+ +.|++||| ++|+|++.+.+.
T Consensus 69 ~~~vv~is~d~~~~~~~~~~~~----~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~ 143 (241)
T 1nm3_A 69 VDDILVVSVNDTFVMNAWKEDE----KSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEP 143 (241)
T ss_dssp CCEEEEEESSCHHHHHHHHHHT----TCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECC
T ss_pred CCEEEEEEcCCHHHHHHHHHhc----CCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEec
Confidence 9 99999999999999999997 776 999999999999999997 22 243 46899999 999999999755
Q ss_pred CCCC-----CCHHHHHHHHHhhc
Q psy2878 148 LNVG-----RNPIETLRILDAIQ 165 (181)
Q Consensus 148 ~~~~-----~~~~~ll~~l~~l~ 165 (181)
.... .+.+++++.|+..+
T Consensus 144 ~~~~~~~~~~~~~~il~~l~~~~ 166 (241)
T 1nm3_A 144 NEPGDPFKVSDADTMLKYLAPQH 166 (241)
T ss_dssp SCSSCCCSSSSHHHHHHHHCTTS
T ss_pred cCCCccceecCHHHHHHHhhhhc
Confidence 4443 68999999998654
No 40
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.97 E-value=4.7e-30 Score=191.31 Aligned_cols=155 Identities=11% Similarity=0.062 Sum_probs=131.1
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCe-EEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKW-KIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~-~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
+.+|+.+|+|++.. |.+| +++++++++||+ +||+|| ++||++|+.+++.|++++++|+++++.+++
T Consensus 18 ~~~g~~~p~f~l~~--------~~~G----~~~~l~~~~gk~~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~ 84 (196)
T 2ywi_A 18 FPLGKQAPPFALTN--------VIDG----NVVRLEDVKSDAATVIMFI-CNHCPFVKHVQHELVRLANDYMPKGVSFVA 84 (196)
T ss_dssp CCTTCBCCCCEEEE--------TTTC----CEEEHHHHCCSSEEEEEEC-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred CCcCCcCCceeeee--------cCCC----CEEeHHHhCCCCeEEEEEe-CCCCccHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 67899999999972 4788 999999999985 888887 889999999999999999999999999999
Q ss_pred Eec--------CCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccC----
Q psy2878 81 GSS--------DNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNL---- 148 (181)
Q Consensus 81 Is~--------d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~---- 148 (181)
|+. |+.+.+++|++++ +++|+++.|.+.++++.|++. ..|++||||++|+|++++....
T Consensus 85 v~~d~~~~~~~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~~~ 155 (196)
T 2ywi_A 85 INSNDAEQYPEDSPENMKKVAEEL----GYPFPYLYDETQEVAKAYDAA-----CTPDFYIFDRDLKCVYRGQLDDSRPN 155 (196)
T ss_dssp EECSCTTTCGGGSHHHHHHHHHHH----TCCSCEEECSSCHHHHHHTCC-----EESEEEEEETTCBEEEEECSSSCCTT
T ss_pred EECCccccccccCHHHHHHHHHHc----CCCceEEECCchHHHHHhCCC-----CCCeEEEEcCCCeEEEccccCccccc
Confidence 998 5688899999998 899999999999999999987 6789999999999999864221
Q ss_pred -CCCCCHHHHHHHHHhhcc----------CCccccCCCCCC
Q psy2878 149 -NVGRNPIETLRILDAIQT----------GKLCACNRTLNG 178 (181)
Q Consensus 149 -~~~~~~~~ll~~l~~l~~----------~~~~~~~~~~~~ 178 (181)
....+.+++.+.|+++.. +.+|+++|.+|+
T Consensus 156 ~~g~~~~~~l~~~i~~ll~~~~~~~~~~~~~gC~~~~~~~~ 196 (196)
T 2ywi_A 156 NGIPVTGESIRAALDALLEGRPVPEKQKPSIGCSIKWKPSA 196 (196)
T ss_dssp TCCCCCCHHHHHHHHHHHHTCCCCSCCCCCEEEECCCCCCC
T ss_pred ccCccCHHHHHHHHHHHHcCCCCCCCCCCCCceeeeeccCC
Confidence 112255677777766542 248999999985
No 41
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.97 E-value=2.6e-30 Score=190.19 Aligned_cols=152 Identities=16% Similarity=0.291 Sum_probs=124.4
Q ss_pred CCccCccCCCcEEecccCCCCCCCCC-cccceeeeecCCC-CCCeEEEEEeeCCCCCCChh-HHHHHHHHHHHHHhcCc-
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEEN-NVSAFKVITESSF-PGKWKIFYFYPKDFTFVCPT-EISEYNKLVKDFNERNA- 76 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~-G~~~~~~~~l~~~-~gk~~ll~F~~~~~cp~C~~-~~~~l~~l~~~~~~~~~- 76 (181)
|+++|+++|++++....+. +.. ..+..++++|+++ +||++||+||++.|||+|.. |++.|++.+++|+++|+
T Consensus 9 ~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d 84 (176)
T 4f82_A 9 MIQVGDALPDAQLFEFIDD----AREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGID 84 (176)
T ss_dssp CCCTTCBCCCCEEEEEECS----CCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCC
T ss_pred hhhcCCcCCceEEEEeccc----ccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 7899999999988754321 100 0013478999997 99999999999999999999 99999999999999999
Q ss_pred EEEEEecCCHHHHHHHHHHcCCCcccc--eeEEEcCCchHHHHhCCC-CC--CCc---ceeeEEEEcCCCcEEEEEeccC
Q psy2878 77 ILLGGSSDNEFVKLAWRRENSNLYKLN--HWQFSDTNGSLIDQLGIR-HE--TGV---ALRATFIFDPQNIIQHITVNNL 148 (181)
Q Consensus 77 ~vi~Is~d~~~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~gv~-~~--~g~---~~p~~~liD~~g~i~~~~~~~~ 148 (181)
+|++||.|+++.+++|+++. +++ |++++|+++++++.||+. +. .|+ +.|++||| ++|+|++.+.++.
T Consensus 85 ~VigIS~D~~~~~~~f~~~~----~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~~~~ 159 (176)
T 4f82_A 85 EIWCVSVNDAFVMGAWGRDL----HTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAVEAP 159 (176)
T ss_dssp EEEEEESSCHHHHHHHHHHT----TCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEECCT
T ss_pred EEEEEeCCCHHHHHHHHHHh----CCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEEcCC
Confidence 99999999999999999997 777 999999999999999998 32 342 46899999 9999999998542
Q ss_pred C--CCCCHHHHHHHH
Q psy2878 149 N--VGRNPIETLRIL 161 (181)
Q Consensus 149 ~--~~~~~~~ll~~l 161 (181)
. ...+++++++.|
T Consensus 160 ~~~~~~~a~~vL~~L 174 (176)
T 4f82_A 160 GKFEVSDAASVLATL 174 (176)
T ss_dssp TCCSSSSHHHHHHTC
T ss_pred CCcchhhHHHHHHHh
Confidence 2 123556666554
No 42
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.97 E-value=9.3e-30 Score=187.38 Aligned_cols=143 Identities=19% Similarity=0.279 Sum_probs=121.1
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++.+|+.+|+|++. |.+| +++++++++||++||+||.+.||++|+.+++.|++++++ .++++|+
T Consensus 17 ~l~~G~~~P~f~l~---------~~~G----~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~ 80 (175)
T 1xvq_A 17 LPAVGSPAPAFTLT---------GGDL----GVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLC 80 (175)
T ss_dssp CCCTTSBCCCCEEE---------CTTS----CEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEE
T ss_pred CCCcCCcCCCeEEE---------CCCC----CEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEE
Confidence 36789999999999 8999 999999999999999999665699999999999999988 6899999
Q ss_pred EecCCHHHHHHHHHHcCCCccc-ceeEEEcCCchHHHHhCCC-CC---CCcceeeEEEEcCCCcEEEEEec-cCCCCCCH
Q psy2878 81 GSSDNEFVKLAWRRENSNLYKL-NHWQFSDTNGSLIDQLGIR-HE---TGVALRATFIFDPQNIIQHITVN-NLNVGRNP 154 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~-~~---~g~~~p~~~liD~~g~i~~~~~~-~~~~~~~~ 154 (181)
||.|+++.+++|++++ ++ +|+++.|++.++++.||+. .. .|.+.|++||||++|+|++++.+ ......++
T Consensus 81 Is~D~~~~~~~~~~~~----~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~ 156 (175)
T 1xvq_A 81 VSKDLPFAQKRFCGAE----GTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNY 156 (175)
T ss_dssp EESSCHHHHTTCC----------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCH
T ss_pred EECCCHHHHHHHHHHc----CCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCH
Confidence 9999999888888876 88 8999999999999999997 21 45567999999999999999963 34456688
Q ss_pred HHHHHHHHh
Q psy2878 155 IETLRILDA 163 (181)
Q Consensus 155 ~~ll~~l~~ 163 (181)
+++++++++
T Consensus 157 ~~~l~~l~~ 165 (175)
T 1xvq_A 157 EAALAALGA 165 (175)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 888888874
No 43
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.97 E-value=7e-31 Score=190.22 Aligned_cols=144 Identities=19% Similarity=0.359 Sum_probs=122.4
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCC--eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGK--WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAIL 78 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk--~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~v 78 (181)
++.+|+.+|+|+++ |.+| ++++|++++|| ++||+||+++|||+|+.+++.|++++++|++++ +|
T Consensus 6 ~~~~G~~~P~f~l~---------~~~G----~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~v 71 (159)
T 2a4v_A 6 ELEIGDPIPDLSLL---------NEDN----DSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AV 71 (159)
T ss_dssp CCCTTCBCCSCEEE---------CTTS----CEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EE
T ss_pred cCCCCCCCCCeEEE---------CCCC----CEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cE
Confidence 36799999999999 8999 99999999987 899999989999999999999999999999989 99
Q ss_pred EEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC-CC-CCcceeeEEEEcCCCcEEEEEeccCCCC----C
Q psy2878 79 LGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR-HE-TGVALRATFIFDPQNIIQHITVNNLNVG----R 152 (181)
Q Consensus 79 i~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~-~~-~g~~~p~~~liD~~g~i~~~~~~~~~~~----~ 152 (181)
|+||.|+++.+++|++++ +++|++++|+++++++.||+. .. .| ..|++||| ++|+|++++.+ .... .
T Consensus 72 v~is~d~~~~~~~~~~~~----~~~~~~l~D~~~~~~~~~gv~~~p~~g-~~~~~~li-~~G~i~~~~~g-~~~~~~~~~ 144 (159)
T 2a4v_A 72 FGLSADSVTSQKKFQSKQ----NLPYHLLSDPKREFIGLLGAKKTPLSG-SIRSHFIF-VDGKLKFKRVK-ISPEVSVND 144 (159)
T ss_dssp EEEESCCHHHHHHHHHHH----TCSSEEEECTTCHHHHHHTCBSSSSSC-BCCEEEEE-ETTEEEEEEES-CCHHHHHHH
T ss_pred EEEeCCCHHHHHHHHHHh----CCCceEEECCccHHHHHhCCcccccCC-ccceEEEE-cCCEEEEEEcc-CCccccHHH
Confidence 999999999999999998 899999999999999999997 21 23 35689999 99999999953 2222 2
Q ss_pred CHHHHHHHHHhhc
Q psy2878 153 NPIETLRILDAIQ 165 (181)
Q Consensus 153 ~~~~ll~~l~~l~ 165 (181)
.++++.+.+++++
T Consensus 145 ~~~~l~~~l~~l~ 157 (159)
T 2a4v_A 145 AKKEVLEVAEKFK 157 (159)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhh
Confidence 3444555555544
No 44
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.97 E-value=5.8e-30 Score=189.84 Aligned_cols=158 Identities=16% Similarity=0.170 Sum_probs=126.6
Q ss_pred CccCccCCCcEEecccC-CC-CCCCCCcccceeeeecCC-CCCCeEEEEEeeCCCCCCCh-hHHHHHHHHHHHH-HhcCc
Q psy2878 2 KTIGQSLSSYRVIGVKP-GF-NLPEENNVSAFKVITESS-FPGKWKIFYFYPKDFTFVCP-TEISEYNKLVKDF-NERNA 76 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~-~~-~~~d~~G~~~~~~~~l~~-~~gk~~ll~F~~~~~cp~C~-~~~~~l~~l~~~~-~~~~~ 76 (181)
+++|+.+|+|+++.... .+ .+...+|++++++++|++ ++||++||+||++.|||+|. .|++.|++.+++| ++.|+
T Consensus 1 l~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~ 80 (182)
T 1xiy_A 1 MKENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNF 80 (182)
T ss_dssp CCTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCC
T ss_pred CCCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 57899999999993100 00 000014433446899998 69999999999999999999 9999999999999 99999
Q ss_pred E-EEEEecCCHHHHHHHHHHcCCCccc-ceeEEEcCCchHHHHhCCC-CC--CCc---ceeeEEEEcCCCcEEEEEeccC
Q psy2878 77 I-LLGGSSDNEFVKLAWRRENSNLYKL-NHWQFSDTNGSLIDQLGIR-HE--TGV---ALRATFIFDPQNIIQHITVNNL 148 (181)
Q Consensus 77 ~-vi~Is~d~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~-~~--~g~---~~p~~~liD~~g~i~~~~~~~~ 148 (181)
+ |++||.|++..+++|.+++ ++ +|++++|+++++++.||+. .. .|+ +.|++|||| +|+|++.++...
T Consensus 81 ~~V~gvS~D~~~~~~~~~~~~----~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~v~~~ 155 (182)
T 1xiy_A 81 DDIYCITNNDIYVLKSWFKSM----DIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMFQEKD 155 (182)
T ss_dssp SEEEEEESSCHHHHHHHHHHT----TCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEEECSS
T ss_pred cEEEEEeCCCHHHHHHHHHHc----CCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEEEeCC
Confidence 5 9999999999999999987 66 6999999999999999997 32 242 578999999 999999997543
Q ss_pred CC---------CCCHHHHHHHHHhh
Q psy2878 149 NV---------GRNPIETLRILDAI 164 (181)
Q Consensus 149 ~~---------~~~~~~ll~~l~~l 164 (181)
.. ..++++++++|++.
T Consensus 156 ~~~~~~~~~~~~~~~~~vL~~L~~~ 180 (182)
T 1xiy_A 156 KQHNIQTDPYDISTVNNVKEFLKNN 180 (182)
T ss_dssp CCTTCSSCCCSTTSHHHHHHHHHCC
T ss_pred cccccccCcccCCCHHHHHHHHHhc
Confidence 32 37899999998753
No 45
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.97 E-value=3.4e-30 Score=187.79 Aligned_cols=145 Identities=17% Similarity=0.240 Sum_probs=126.9
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+.+|+|++. |.+| +++++++++||++||+||.+.||++|+.+++.|++++++| .++++++|
T Consensus 18 ~~~G~~~p~f~l~---------~~~G----~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~i 82 (167)
T 2jsy_A 18 VKVGDQAPDFTVL---------TNSL----EEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTI 82 (167)
T ss_dssp CCTTSCCCCCEEE---------BTTC----CEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEE
T ss_pred cCCCCcCCceEEE---------CCCC----CEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEE
Confidence 6789999999999 8999 9999999999999999995545999999999999999999 68999999
Q ss_pred ecCCHHHHHHHHHHcCCCccc-ceeEEEc-CCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEecc-CCCCCCHHHH
Q psy2878 82 SSDNEFVKLAWRRENSNLYKL-NHWQFSD-TNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNN-LNVGRNPIET 157 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~-~~~~~~~~~l 157 (181)
|.|+++.+++|++++ ++ +|+++.| ++.++++.||+. ...|++.|++||||++|+|++++.+. .....+.+++
T Consensus 83 s~d~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l 158 (167)
T 2jsy_A 83 SADLPFAQARWCGAN----GIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKP 158 (167)
T ss_dssp ECSSGGGTSCCGGGS----SCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHH
T ss_pred ECCCHHHHHHHHHhc----CCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHH
Confidence 999988888888876 88 8999999 899999999998 33455579999999999999999743 2334577999
Q ss_pred HHHHHhhc
Q psy2878 158 LRILDAIQ 165 (181)
Q Consensus 158 l~~l~~l~ 165 (181)
++.|+++.
T Consensus 159 ~~~l~~ll 166 (167)
T 2jsy_A 159 IEAAKALV 166 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99998764
No 46
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.97 E-value=5.2e-30 Score=205.70 Aligned_cols=138 Identities=22% Similarity=0.349 Sum_probs=124.2
Q ss_pred ccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 6 QSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 6 ~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
.++|+|+|+ |.+| ++++|+|++||++||+||++.|||.|+.|++.|++. ..++++|+|||.|+
T Consensus 2 ak~p~F~l~---------~~~G----~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~ 64 (322)
T 4eo3_A 2 ARVKHFELL---------TDEG----KTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDS 64 (322)
T ss_dssp CBCCCCEEE---------ETTS----CEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCC
T ss_pred CCCCCcEEE---------CCCc----CEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCC
Confidence 478999999 9999 999999999999999999999999999999888642 23589999999999
Q ss_pred HHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 86 EFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
++.+++|++++ +++||+++|+++++++.||++. .+...|++||||++|+|++++. ...+..+++++++.|++++
T Consensus 65 ~~~~~~f~~~~----~l~fp~l~D~~~~v~~~ygv~~-~~~~~r~tfiId~~G~i~~~~~-~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 65 VEALKRFKEKN----DLKVTLLSDPEGILHEFFNVLE-NGKTVRSTFLIDRWGFVRKEWR-RVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp HHHHHHHHHHH----TCCSEEEECTTCHHHHHTTCEE-TTEECCEEEEECTTSBEEEEEE-SCCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh----CCceEEEEcCchHHHHhcCCCC-CCcCccEEEEECCCCEEEEEEe-CCCccccHHHHHHHHhhhc
Confidence 99999999998 9999999999999999999972 2446789999999999999984 6788899999999999987
Q ss_pred c
Q psy2878 166 T 166 (181)
Q Consensus 166 ~ 166 (181)
.
T Consensus 139 ~ 139 (322)
T 4eo3_A 139 E 139 (322)
T ss_dssp H
T ss_pred h
Confidence 4
No 47
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.96 E-value=7.3e-30 Score=187.35 Aligned_cols=143 Identities=18% Similarity=0.246 Sum_probs=120.1
Q ss_pred CccCccCCCcEEecccCCCCCCCCC-cccceeeeecCCC-CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcE-E
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEEN-NVSAFKVITESSF-PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI-L 78 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~-G~~~~~~~~l~~~-~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~-v 78 (181)
+++|+++|+|+++ +.+ | ++++|+++ +||++||+||++.|||+|..|++.|++.+++|++.|++ |
T Consensus 14 ~~vGd~aPdf~l~---------~~g~~----~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~V 80 (171)
T 2xhf_A 14 IKVGDIIPDVLVY---------EDVPS----KSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTI 80 (171)
T ss_dssp CCTTCBCCCCEEE---------CSSTT----CEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEE
T ss_pred ccCcCCCCCeEEe---------cCCCC----cEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEE
Confidence 5799999999998 322 4 79999995 99999999999999999999999999999999999996 9
Q ss_pred EEEecCCHHHHHHHHHHcCCCccc--ceeEEEcCCchHHHHhCCC-CCC----C-cceeeEEEEcCCCcEEEEEeccCCC
Q psy2878 79 LGGSSDNEFVKLAWRRENSNLYKL--NHWQFSDTNGSLIDQLGIR-HET----G-VALRATFIFDPQNIIQHITVNNLNV 150 (181)
Q Consensus 79 i~Is~d~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~gv~-~~~----g-~~~p~~~liD~~g~i~~~~~~~~~~ 150 (181)
++||.|++..+++|+++. ++ +|++++|+++++++.||+. ... + ...|++|||| +|+|++.++++.+.
T Consensus 81 igIS~D~~~~~~~w~~~~----~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~v~~~~~ 155 (171)
T 2xhf_A 81 ACIAVNDPFVMAAWGKTV----DPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVSTEPDIT 155 (171)
T ss_dssp EEEESSCHHHHHHHHHHH----CTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEEETTSCS
T ss_pred EEEeCCCHHHHHHHHHhc----CCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEEEeCCCC
Confidence 999999999999999988 66 8999999999999999998 321 2 3678999999 99999999754332
Q ss_pred ---CCCHHHHHHHHH
Q psy2878 151 ---GRNPIETLRILD 162 (181)
Q Consensus 151 ---~~~~~~ll~~l~ 162 (181)
....++++++++
T Consensus 156 ~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 156 GLACLLSIQRQKENK 170 (171)
T ss_dssp HHHHHHHHHHC----
T ss_pred cccCCCHHHHHHHhc
Confidence 224566766654
No 48
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.96 E-value=4.7e-28 Score=173.18 Aligned_cols=142 Identities=11% Similarity=0.126 Sum_probs=125.9
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+++|+++|+|++. + +| +++++++++||++||+|| ++||+.|..+++.|.++++++.+.++.+++|
T Consensus 3 l~~G~~~P~f~l~---------~-~g----~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v 67 (152)
T 3gl3_A 3 LDKGDKAPDFALP---------G-KT----GVVKLSDKTGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAKGFQVVAV 67 (152)
T ss_dssp CCTTSBCCCCEEE---------B-SS----SEEEGGGGTTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCCCcCCceEee---------C-CC----CeEeHHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 7899999999999 8 89 999999999999999999 8899999999999999999999999999999
Q ss_pred ecC-CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHH
Q psy2878 82 SSD-NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRI 160 (181)
Q Consensus 82 s~d-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~ 160 (181)
+.| ..+..++|.+++ +++|+++.|.+.++++.|++. ..|++||||++|+|++++.+ ....+.+++.+.
T Consensus 68 ~~d~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g--~~~~~~~~l~~~ 136 (152)
T 3gl3_A 68 NLDAKTGDAMKFLAQV----PAEFTVAFDPKGQTPRLYGVK-----GMPTSFLIDRNGKVLLQHVG--FRPADKEALEQQ 136 (152)
T ss_dssp ECCSSHHHHHHHHHHS----CCCSEEEECTTCHHHHHTTCC-----SSSEEEEECTTSBEEEEEES--CCTTTHHHHHHH
T ss_pred ECCCCHHHHHHHHHHc----CCCCceeECCcchhHHHcCCC-----CCCeEEEECCCCCEEEEEcc--CCCcCHHHHHHH
Confidence 988 567788888887 899999999999999999987 67899999999999999953 233567889999
Q ss_pred HHhhccCCc
Q psy2878 161 LDAIQTGKL 169 (181)
Q Consensus 161 l~~l~~~~~ 169 (181)
|+++..+..
T Consensus 137 i~~~~~~~~ 145 (152)
T 3gl3_A 137 ILAALGGNE 145 (152)
T ss_dssp HHHHTC---
T ss_pred HHHHHcccc
Confidence 988775543
No 49
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.96 E-value=1.7e-28 Score=175.86 Aligned_cols=142 Identities=17% Similarity=0.222 Sum_probs=124.7
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
|+.+|+++|+|++. |.+| +++++++++||++||+|| ++||+.|..+++.|.++++++.+.++.+++
T Consensus 1 m~~~G~~~p~~~l~---------~~~g----~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~ 66 (154)
T 3kcm_A 1 MSLEENPAPDFTLN---------TLNG----EVVKLSDLKGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKPFRMLC 66 (154)
T ss_dssp --CTTSBCCCCEEE---------CTTS----CEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEE
T ss_pred CCCCCCCCCCeEEE---------cCCC----CEEehhhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEE
Confidence 78899999999999 8999 999999999999999999 899999999999999999999988999999
Q ss_pred EecCC--HHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHH
Q psy2878 81 GSSDN--EFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETL 158 (181)
Q Consensus 81 Is~d~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll 158 (181)
|+.|. .+..++|++++ +++|+++.|.+..+++.|++. ..|++||||++|+|++++.+ ....+.+++.
T Consensus 67 v~~d~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g--~~~~~~~~l~ 135 (154)
T 3kcm_A 67 VSIDEGGKVAVEEFFRKT----GFTLPVLLDADKRVGKLYGTT-----GVPETFVIDRHGVILKKVVG--AMEWDHPEVI 135 (154)
T ss_dssp EECCTTHHHHHHHHHHHH----CCCCCEEECTTCHHHHHHTCC-----SBCEEEEECTTSBEEEEEES--CCCTTSHHHH
T ss_pred EEcCCcchHHHHHHHHHc----CCCeeEEecCchHHHHHhCCC-----CCCeEEEECCCCcEEEEEcC--CCccccHHHH
Confidence 99987 77888999988 899999999999999999987 67899999999999999853 2234567888
Q ss_pred HHHHhhccC
Q psy2878 159 RILDAIQTG 167 (181)
Q Consensus 159 ~~l~~l~~~ 167 (181)
+.|+++...
T Consensus 136 ~~l~~l~~~ 144 (154)
T 3kcm_A 136 AFLNNELSK 144 (154)
T ss_dssp HHHHTC---
T ss_pred HHHHHHHHH
Confidence 888887654
No 50
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.96 E-value=7.9e-29 Score=182.13 Aligned_cols=147 Identities=15% Similarity=0.238 Sum_probs=116.7
Q ss_pred cCccCCCcEEecccCCCCCCCCCcc-cceeeeecCCC-CCCeEEEEEeeCCCCCCChhH-HHHHHHHHHHHHhcCcE-EE
Q psy2878 4 IGQSLSSYRVIGVKPGFNLPEENNV-SAFKVITESSF-PGKWKIFYFYPKDFTFVCPTE-ISEYNKLVKDFNERNAI-LL 79 (181)
Q Consensus 4 ~G~~~P~f~l~~~~~~~~~~d~~G~-~~~~~~~l~~~-~gk~~ll~F~~~~~cp~C~~~-~~~l~~l~~~~~~~~~~-vi 79 (181)
+|+++|+|++++... +.+|. +.+++++|+++ +||++||+||+++|||+|+.| ++.|++++++|+++|++ |+
T Consensus 9 ~g~~aP~f~l~~~~~-----~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv 83 (171)
T 2pwj_A 9 ILSAASNVSLQKART-----WDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVI 83 (171)
T ss_dssp -CCCSSSBCCCSCEE-----CCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEE
T ss_pred ccCcCCCeEEecccc-----cccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 456999999993210 00120 11168999996 998888888889999999999 99999999999999999 99
Q ss_pred EEecCCHHHHHHHHHHcCCCccc--ceeEEEcCCchHHHHhCCC-CCC----Cc-ceeeEEEEcCCCcEEEEEeccCCC-
Q psy2878 80 GGSSDNEFVKLAWRRENSNLYKL--NHWQFSDTNGSLIDQLGIR-HET----GV-ALRATFIFDPQNIIQHITVNNLNV- 150 (181)
Q Consensus 80 ~Is~d~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~gv~-~~~----g~-~~p~~~liD~~g~i~~~~~~~~~~- 150 (181)
+||.|+++.+++|++++ ++ +|++++|+++++++.||+. ... |. ..|++|+|| +|+|++++.+..+.
T Consensus 84 ~Is~d~~~~~~~~~~~~----~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~~~~~~~ 158 (171)
T 2pwj_A 84 CVAINDPYTVNAWAEKI----QAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNVEESPSD 158 (171)
T ss_dssp EEESSCHHHHHHHHHHT----TCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEECSSTTC
T ss_pred EEeCCCHHHHHHHHHHh----CCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEeecCCCC
Confidence 99999999999999987 64 7999999999999999997 221 22 357899999 99999999754443
Q ss_pred --CCCHHHHHHH
Q psy2878 151 --GRNPIETLRI 160 (181)
Q Consensus 151 --~~~~~~ll~~ 160 (181)
..++++++++
T Consensus 159 ~~~~~~~~il~~ 170 (171)
T 2pwj_A 159 VKVSGAETILGQ 170 (171)
T ss_dssp CSSSSHHHHHHH
T ss_pred CcccCHHHHHhc
Confidence 3466777665
No 51
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=6.1e-28 Score=172.79 Aligned_cols=134 Identities=19% Similarity=0.212 Sum_probs=119.0
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecC--CCCCCeEEEEEeeCCCCCC--ChhHHHHHHHHHHHH-HhcC
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITES--SFPGKWKIFYFYPKDFTFV--CPTEISEYNKLVKDF-NERN 75 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~--~~~gk~~ll~F~~~~~cp~--C~~~~~~l~~l~~~~-~~~~ 75 (181)
.+++|+++|+|+++ |.+| ++++++ +++||++||+|| ++||++ |+.+++.|.+++++| ++.+
T Consensus 4 ~l~~G~~~p~f~l~---------~~~g----~~~~l~~~~~~gk~vll~F~-a~~C~~v~C~~~~~~l~~l~~~~~~~~~ 69 (150)
T 3fw2_A 4 KSEIGKYAPFFSLP---------NAKG----EKITRSSDAFKQKSLLINFW-ASWNDSISQKQSNSELREIYKKYKKNKY 69 (150)
T ss_dssp TTSTTSBCCCCCEE---------BTTC----CEECTTSTTTTTSEEEEEEE-CTTCCCHHHHHHHHHHHHHHHHHTTCSS
T ss_pred cccCCCcCCccEeE---------CCCC----CEEecchhhhCCCEEEEEEE-eCCCCchHHHHHHHHHHHHHHHhccCCC
Confidence 36899999999999 8999 999999 999999999999 789999 999999999999999 7788
Q ss_pred cEEEEEecCC-HHHHHHHHHHcCCCcccceeEEEcC---CchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCC
Q psy2878 76 AILLGGSSDN-EFVKLAWRRENSNLYKLNHWQFSDT---NGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVG 151 (181)
Q Consensus 76 ~~vi~Is~d~-~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~ 151 (181)
+.+++|+.|. .+..++|++++ +++|+++.|. +.++++.||+. ..|++||||++|+|++++.
T Consensus 70 ~~~v~v~~d~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~------ 134 (150)
T 3fw2_A 70 IGMLGISLDVDKQQWKDAIKRD----TLDWEQVCDFGGLNSEVAKQYSIY-----KIPANILLSSDGKILAKNL------ 134 (150)
T ss_dssp EEEEEEECCSCHHHHHHHHHHT----TCCSEEECCSCGGGCHHHHHTTCC-----SSSEEEEECTTSBEEEESC------
T ss_pred eEEEEEEcCCCHHHHHHHHHHh----CCCceEEEcCcccchHHHHHcCCC-----ccCeEEEECCCCEEEEccC------
Confidence 9999999986 47888899887 9999999998 67999999987 6789999999999999883
Q ss_pred CCHHHHHHHHHhh
Q psy2878 152 RNPIETLRILDAI 164 (181)
Q Consensus 152 ~~~~~ll~~l~~l 164 (181)
..+++.+.|+++
T Consensus 135 -~~~~l~~~l~~l 146 (150)
T 3fw2_A 135 -RGEELKKKIENI 146 (150)
T ss_dssp -CHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHH
Confidence 445666666554
No 52
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.96 E-value=1.2e-27 Score=174.81 Aligned_cols=145 Identities=11% Similarity=0.136 Sum_probs=122.3
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCC-CChhHHHHHHHHHHHHHhcC--cEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTF-VCPTEISEYNKLVKDFNERN--AIL 78 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp-~C~~~~~~l~~l~~~~~~~~--~~v 78 (181)
+.+|+.+|+|++. |.+| +++++++++||++||+|| ++||+ +|+.+++.|.++++++++.+ ++|
T Consensus 7 l~~g~~~p~f~l~---------~~~G----~~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v 72 (174)
T 1xzo_A 7 DPLNYEVEPFTFQ---------NQDG----KNVSLESLKGEVWLADFI-FTNCETICPPMTAHMTDLQKKLKAENIDVRI 72 (174)
T ss_dssp SCCCEECCCCEEE---------CTTS----CEEETGGGTTCCEEEEEE-CSCCSSCCCSHHHHHHHHHHHHHHTTCCCEE
T ss_pred CccccccCCcEEE---------cCCC----CEEehhhcCCCEEEEEEE-cCCCcchhHHHHHHHHHHHHHhhhcCCcEEE
Confidence 6789999999999 8999 999999999999999999 88999 99999999999999999886 999
Q ss_pred EEEecC----CHHHHHHHHHHcCCCcccce---eEEEcCCchHHHHhCC-----C--C----CCCcceeeEEEEcCCCcE
Q psy2878 79 LGGSSD----NEFVKLAWRRENSNLYKLNH---WQFSDTNGSLIDQLGI-----R--H----ETGVALRATFIFDPQNII 140 (181)
Q Consensus 79 i~Is~d----~~~~~~~~~~~~~~~~~~~~---~~~~D~~~~~~~~~gv-----~--~----~~g~~~p~~~liD~~g~i 140 (181)
|+||.| +++.+++|++++ +++| +++.|++.++++.|++ . . ....+.|++||||++|+|
T Consensus 73 v~is~d~~~d~~~~~~~~~~~~----~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 148 (174)
T 1xzo_A 73 ISFSVDPENDKPKQLKKFAANY----PLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKV 148 (174)
T ss_dssp EEEESCTTTCCHHHHHHHHTTS----CCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHc----CCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeE
Confidence 999987 577888888877 7777 9999988888877753 1 0 012357899999999999
Q ss_pred EEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 141 QHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 141 ~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
++++.+.. ..+.+++++.|+++..
T Consensus 149 ~~~~~g~~--~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 149 LKDYNGVE--NTPYDDIISDVKSAST 172 (174)
T ss_dssp EEEEESSS--SCCHHHHHHHHHHHTC
T ss_pred EEEEcCCC--CCCHHHHHHHHHHHHh
Confidence 99995322 2467889999988754
No 53
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.96 E-value=3.6e-28 Score=172.04 Aligned_cols=133 Identities=11% Similarity=0.103 Sum_probs=117.3
Q ss_pred ccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHH---HHHHHHhcCcEEE
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNK---LVKDFNERNAILL 79 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~---l~~~~~~~~~~vi 79 (181)
++|+++|+|++. |.+| +++++++++||++||+|| ++||++|+.+++.|.+ +++++++.++.++
T Consensus 2 ~~G~~~p~f~l~---------~~~g----~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v 67 (142)
T 3ewl_A 2 NAGMKAADFTYV---------TVHG----DNSRMSRLKAQYTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVENGTLRVL 67 (142)
T ss_dssp CTTSBCCCCEEE---------CTTC----CEEEGGGCCCSEEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEE
T ss_pred CCCCcCCCCEEE---------CCCC----CEEEhhhcCCCEEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhccCCeEEE
Confidence 689999999999 8999 999999999999999999 8899999999999998 9999999999999
Q ss_pred EEecC-CHHHHHHHHHHcCCCcccceeEEEcCCchHHH--HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHH
Q psy2878 80 GGSSD-NEFVKLAWRRENSNLYKLNHWQFSDTNGSLID--QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIE 156 (181)
Q Consensus 80 ~Is~d-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ 156 (181)
+|+.| +.+..++|++++ +++|+++.|.++.+.. .|++. ..|++||||++|+|++.. ...++
T Consensus 68 ~v~~d~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~-------~~~~~ 131 (142)
T 3ewl_A 68 AIYPDENREEWATKAVYM----PQGWIVGWNKAGDIRTRQLYDIR-----ATPTIYLLDGRKRVILKD-------TSMEQ 131 (142)
T ss_dssp EEECSSCHHHHHHHHTTS----CTTCEEEECTTCHHHHTTCSCCC-----SSSEEEEECTTCBEEECS-------CCHHH
T ss_pred EEEecCCHHHHHHHHHHc----CCCcceeeCCccchhhHHHcCCC-----CCCeEEEECCCCCEEecC-------CCHHH
Confidence 99998 567778888876 8999999999999987 89987 678999999999999743 35677
Q ss_pred HHHHHHhhc
Q psy2878 157 TLRILDAIQ 165 (181)
Q Consensus 157 ll~~l~~l~ 165 (181)
+.+.|++++
T Consensus 132 l~~~l~~~~ 140 (142)
T 3ewl_A 132 LIDYLATQA 140 (142)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHHc
Confidence 887777654
No 54
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.95 E-value=2e-27 Score=170.44 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=118.7
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+.+|+|++. |.+| +++++++++||++||+|| ++||+.|+.+++.|+++++++.++++.+++|
T Consensus 3 l~~g~~~p~f~l~---------~~~G----~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 68 (152)
T 2lrn_A 3 LATGSVAPAITGI---------DLKG----NSVSLNDFKGKYVLVDFW-FAGCSWCRKETPYLLKTYNAFKDKGFTIYGV 68 (152)
T ss_dssp SCTTEECCCCEEE---------CSSS----CEEESGGGTTSEEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred ccCCCcCCCceeE---------cCCC----CEEeHHHcCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 7899999999999 8999 999999999999999998 8899999999999999999999889999999
Q ss_pred ecCC-HHHHHHHHHHcCCCcccceeEEEcC---CchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 82 SSDN-EFVKLAWRRENSNLYKLNHWQFSDT---NGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 82 s~d~-~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
+.|. .+..++|.+++ +++|+++.|+ +..+++.||+. ..|++||||++|+|++++. ..+++
T Consensus 69 ~~d~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~-------~~~~l 132 (152)
T 2lrn_A 69 STDRREEDWKKAIEED----KSYWNQVLLQKDDVKDVLESYCIV-----GFPHIILVDPEGKIVAKEL-------RGDDL 132 (152)
T ss_dssp ECCSCHHHHHHHHHHH----TCCSEEEEECHHHHHHHHHHTTCC-----SSCEEEEECTTSEEEEECC-------CTTHH
T ss_pred EccCCHHHHHHHHHHh----CCCCeEEecccchhHHHHHHhCCC-----cCCeEEEECCCCeEEEeeC-------CHHHH
Confidence 9884 67788888887 8999999998 78999999987 6789999999999999873 12456
Q ss_pred HHHHHhhc
Q psy2878 158 LRILDAIQ 165 (181)
Q Consensus 158 l~~l~~l~ 165 (181)
.+.|+++.
T Consensus 133 ~~~l~~l~ 140 (152)
T 2lrn_A 133 YNTVEKFV 140 (152)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665554
No 55
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.95 E-value=1.1e-27 Score=169.92 Aligned_cols=131 Identities=11% Similarity=0.104 Sum_probs=114.0
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHH---HHHHHHhcCcEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNK---LVKDFNERNAIL 78 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~---l~~~~~~~~~~v 78 (181)
..+|+++|+|++. |.+| ++++|++++||++||+|| ++||++|+.+++.|.+ +++++++.++.+
T Consensus 5 ~~~G~~ap~f~l~---------~~~g----~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~v 70 (142)
T 3eur_A 5 NRLGTKALNFTYT---------LDSG----VKGTLYQFPAEYTLLFIN-NPGCHACAEMIEGLKASPVINGFTAAKKLKV 70 (142)
T ss_dssp TCTTSBCCCCEEE---------ETTS----CEEETTTCCCSEEEEEEC-CSSSHHHHHHHHHHHHCHHHHHHHHTTSEEE
T ss_pred hcCCCccCCcEEE---------cCCC----CEeeHHHcCCCEEEEEEE-CCCCccHHHHHHHHhhhHHHHHHhccCCeEE
Confidence 5689999999999 8999 999999999999999999 9999999999999999 999999999999
Q ss_pred EEEecCCH-HHHHHHHHHcCCCcccceeEEEcCCch--HHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHH
Q psy2878 79 LGGSSDNE-FVKLAWRRENSNLYKLNHWQFSDTNGS--LIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPI 155 (181)
Q Consensus 79 i~Is~d~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~ 155 (181)
++|+.|.. +..++|++++ +++|+.+.|.+.. +++.|++. ..|++||||++|+|+++.. ..+
T Consensus 71 i~i~~d~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~-------~~~ 134 (142)
T 3eur_A 71 LSIYPDEELDEWKKHRNDF----AKEWTNGYDKELVIKNKNLYDLR-----AIPTLYLLDKNKTVLLKDA-------TLQ 134 (142)
T ss_dssp EEEECSSCHHHHHHHGGGS----CTTSEEEECTTCHHHHTTCSCCT-----TCSEEEEECTTCBEEEEEE-------CHH
T ss_pred EEEEcCCCHHHHHHHHHhc----ccccccccCccchhhhhhhcCCC-----cCCeEEEECCCCcEEecCC-------CHH
Confidence 99999864 5666777766 8899999998765 68888886 6789999999999999884 246
Q ss_pred HHHHHHH
Q psy2878 156 ETLRILD 162 (181)
Q Consensus 156 ~ll~~l~ 162 (181)
++.+.|+
T Consensus 135 ~l~~~l~ 141 (142)
T 3eur_A 135 KVEQYLA 141 (142)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6665554
No 56
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.95 E-value=1.2e-27 Score=172.26 Aligned_cols=136 Identities=12% Similarity=0.107 Sum_probs=119.7
Q ss_pred cCccCCCcEEecccCCCCCCCC--CcccceeeeecCCCCCCeEEEEEeeCCCCCCChhH-HHHHHHHHHHHHhcCcEEEE
Q psy2878 4 IGQSLSSYRVIGVKPGFNLPEE--NNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTE-ISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 4 ~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~-~~~l~~l~~~~~~~~~~vi~ 80 (181)
.|+++|+|+++ |. +| +++++++++||++||+|| ++||++|+.+ ++.|++++++|++.++.+++
T Consensus 2 ~g~~aP~f~l~---------~~~~~g----~~~~l~~~~gk~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~ 67 (158)
T 3eyt_A 2 NAMKAPELQIQ---------QWFNSA----TDLTLADLRGKVIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDKVAVLG 67 (158)
T ss_dssp CCEECCCCCEE---------EEESCS----SCCCTGGGTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCCcCCCceeh---------hhhcCC----CccCHHHhCCCEEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCCEEEEE
Confidence 68999999999 63 78 999999999999999999 7899999997 99999999999988999999
Q ss_pred Eec-------CCHHHHHHHHHHcCCCcccceeEEEcCCc-----hHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccC
Q psy2878 81 GSS-------DNEFVKLAWRRENSNLYKLNHWQFSDTNG-----SLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNL 148 (181)
Q Consensus 81 Is~-------d~~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~ 148 (181)
|+. ++.+.+++|++++ +++|+++.|.+. ++++.||+. ..|++||||++|+|++++.+.
T Consensus 68 v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g~- 137 (158)
T 3eyt_A 68 LHTVFEHHEAMTPISLKAFLHEY----RIKFPVGVDQPGDGAMPRTMAAYQMR-----GTPSLLLIDKAGDLRAHHFGD- 137 (158)
T ss_dssp EECCCSCGGGSCHHHHHHHHHHT----TCCSCEEEECCCSSSSCHHHHHTTCC-----SSSEEEEECTTSEEEEEEESC-
T ss_pred EEecccccccCCHHHHHHHHHHc----CCCceEEEcCccchhhHHHHHHcCCC-----CCCEEEEECCCCCEEEEEeCC-
Confidence 995 5788999999998 999999999887 799999987 678999999999999998633
Q ss_pred CCCCCHHHHHHHHHhhcc
Q psy2878 149 NVGRNPIETLRILDAIQT 166 (181)
Q Consensus 149 ~~~~~~~~ll~~l~~l~~ 166 (181)
...+++.+.|+++..
T Consensus 138 ---~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 138 ---VSELLLGAEIATLLG 152 (158)
T ss_dssp ---CCHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHHhc
Confidence 345677777776654
No 57
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.95 E-value=2.4e-27 Score=168.33 Aligned_cols=136 Identities=12% Similarity=0.168 Sum_probs=121.0
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+++|+|++. |.+| +++++++++||++||+|| ++||+.|..+++.|.++++++.++++.+++|
T Consensus 5 ~~~G~~~p~~~l~---------~~~g----~~~~l~~~~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v 70 (148)
T 3hcz_A 5 LLLGKKAPNLYMT---------DTTG----TYRYLYDVQAKYTILFFW-DSQCGHCQQETPKLYDWWLKNRAKGIQVYAA 70 (148)
T ss_dssp CCTTSBCCCCCCB---------CTTS----CBCCGGGCCCSEEEEEEE-CGGGCTTCSHHHHHHHHHHHHGGGTEEEEEE
T ss_pred cCCCCcCCceEEe---------cCCC----CEEEhHHcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCEEEEEE
Confidence 5789999999999 8999 999999999999999998 8899999999999999999999999999999
Q ss_pred ecC-CHHHHHHHHHHcCCCcccc-eeEEEcCCch--HHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 82 SSD-NEFVKLAWRRENSNLYKLN-HWQFSDTNGS--LIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 82 s~d-~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~--~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
+.| +.+..++|.+++ +++ |+++.|++.. +++.|++. ..|++||||++|+|++.+.+. .+++++
T Consensus 71 ~~d~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~i~-----~~P~~~lid~~G~i~~~~~g~----~~~~~~ 137 (148)
T 3hcz_A 71 NIERKDEEWLKFIRSK----KIGGWLNVRDSKNHTDFKITYDIY-----ATPVLYVLDKNKVIIAKRIGY----ENLDDF 137 (148)
T ss_dssp ECCSSSHHHHHHHHHH----TCTTSEEEECTTCCCCHHHHHCCC-----SSCEEEEECTTCBEEEESCCG----GGHHHH
T ss_pred EecCCHHHHHHHHHHc----CCCCceEEeccccchhHHHhcCcC-----CCCEEEEECCCCcEEEecCCH----HHHHHH
Confidence 998 567889999988 888 9999999888 99999987 678999999999999988432 456777
Q ss_pred HHHHHhh
Q psy2878 158 LRILDAI 164 (181)
Q Consensus 158 l~~l~~l 164 (181)
++.+.++
T Consensus 138 l~~l~~~ 144 (148)
T 3hcz_A 138 LVQYEKS 144 (148)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666543
No 58
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=6.4e-27 Score=167.44 Aligned_cols=140 Identities=13% Similarity=0.185 Sum_probs=123.2
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
|..+|+++|+|++. |.+| +.+++++++||++||+|| ++||+.|..+++.|+++++++.+.++.+++
T Consensus 1 m~~~G~~~p~~~l~---------~~~g----~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~ 66 (153)
T 2l5o_A 1 MSLDSKTAPAFSLP---------DLHG----KTVSNADLQGKVTLINFW-FPSCPGCVSEMPKIIKTANDYKNKNFQVLA 66 (153)
T ss_dssp ---CCTTCCSCEEE---------CTTS----CEEEHHHHTTCEEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGTTEEEEE
T ss_pred CCCCCCCCCCcEee---------cCCC----CCccHHHhCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCeEEEE
Confidence 67799999999999 8999 999999999999999998 889999999999999999999998999999
Q ss_pred Ee--cCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHH
Q psy2878 81 GS--SDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETL 158 (181)
Q Consensus 81 Is--~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll 158 (181)
|+ .|+.+..++|++++ +++|+++.|.+..+++.|++. ..|++||||++|+|++.+.+. .+.+++.
T Consensus 67 v~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~i~-----~~P~~~lid~~G~i~~~~~g~----~~~~~l~ 133 (153)
T 2l5o_A 67 VAQPIDPIESVRQYVKDY----GLPFTVMYDADKAVGQAFGTQ-----VYPTSVLIGKKGEILKTYVGE----PDFGKLY 133 (153)
T ss_dssp EECTTSCHHHHHHHHHHT----TCCSEEEECSSCHHHHHHTCC-----SSSEEEEECSSSCCCEEEESS----CCHHHHH
T ss_pred EecCCCCHHHHHHHHHHc----CCCceEEcCchHHHHHHcCCC-----ccCeEEEECCCCcEEEEEcCC----CCHHHHH
Confidence 99 56788999999987 999999999999999999987 678999999999999888532 4667888
Q ss_pred HHHHhhccC
Q psy2878 159 RILDAIQTG 167 (181)
Q Consensus 159 ~~l~~l~~~ 167 (181)
+.|+++...
T Consensus 134 ~~l~~ll~~ 142 (153)
T 2l5o_A 134 QEIDTAWRN 142 (153)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 888776543
No 59
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.95 E-value=9.9e-27 Score=166.38 Aligned_cols=139 Identities=16% Similarity=0.287 Sum_probs=123.5
Q ss_pred ccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
++|+.+|+|++. |.+| +.+++++++||++||+|| ++||+.|..+++.|.++++++.+.++.+++|+
T Consensus 1 ~~G~~~p~~~l~---------~~~g----~~~~l~~~~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~ 66 (151)
T 2f9s_A 1 SEGSDAPNFVLE---------DTNG----KRIELSDLKGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVN 66 (151)
T ss_dssp -CCEECCCCEEE---------CTTC----CEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCCCcCCcceeE---------cCCC----CEEEHHHcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 479999999999 8999 999999999999999999 88999999999999999999998899999999
Q ss_pred cC-CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q psy2878 83 SD-NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRIL 161 (181)
Q Consensus 83 ~d-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l 161 (181)
.| +.+..++|++++ +++|+++.|.+..+++.|++. ..|++||||++|++++.+.+. ...+++.+.|
T Consensus 67 ~d~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~G~----~~~~~l~~~l 133 (151)
T 2f9s_A 67 VGESKIAVHNFMKSY----GVNFPVVLDTDRQVLDAYDVS-----PLPTTFLINPEGKVVKVVTGT----MTESMIHDYM 133 (151)
T ss_dssp ESCCHHHHHHHHHHH----TCCSCEEEETTSHHHHHTTCC-----SSCEEEEECTTSEEEEEEESC----CCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHc----CCCceEEECCchHHHHhcCCC-----CCCeEEEECCCCcEEEEEeCC----CCHHHHHHHH
Confidence 86 467888999988 899999999999999999987 678999999999999988532 3567888888
Q ss_pred HhhccCC
Q psy2878 162 DAIQTGK 168 (181)
Q Consensus 162 ~~l~~~~ 168 (181)
+++..+.
T Consensus 134 ~~ll~~~ 140 (151)
T 2f9s_A 134 NLIKPGE 140 (151)
T ss_dssp HHHSCC-
T ss_pred HHHHhhh
Confidence 8876543
No 60
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.95 E-value=1.1e-27 Score=170.16 Aligned_cols=131 Identities=17% Similarity=0.225 Sum_probs=110.2
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+.+|+|++. .+| ++++|++++||++||+|| ++||++|+.+++.|++++++|+++++.+++|
T Consensus 7 l~~G~~~P~f~l~----------~~g----~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~v 71 (143)
T 4fo5_A 7 VNPGDLAPRIEFL----------GND----AKASFHNQLGRYTLLNFW-AAYDAESRARNVQLANEVNKFGPDKIAMCSI 71 (143)
T ss_dssp SSTTSBCCCCCC-------------------CCCSCCSSCCEEEEEEE-CTTCHHHHHHHHHHHHHHTTSCTTTEEEEEE
T ss_pred cCCcccCCceEEc----------CCC----CEEEHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhCcCCEEEEEE
Confidence 6799999999883 577 999999999999999998 8899999999999999999999889999999
Q ss_pred ecC-CHHHHHHHHHHcCCCcccce-eEEEcCC---chHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHH
Q psy2878 82 SSD-NEFVKLAWRRENSNLYKLNH-WQFSDTN---GSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIE 156 (181)
Q Consensus 82 s~d-~~~~~~~~~~~~~~~~~~~~-~~~~D~~---~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ 156 (181)
|.| +.+..++|++++ +++| ++++|.. ..+++.|++. ..|++||||++|+|++++. ..++
T Consensus 72 s~d~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~-------~~~~ 135 (143)
T 4fo5_A 72 SMDEKESIFTETVKID----KLDLSTQFHEGLGKESELYKKYDLR-----KGFKNFLINDEGVIIAANV-------TPEK 135 (143)
T ss_dssp ECCSCHHHHHHHHHHH----TCCGGGEEECTTGGGSHHHHHTTGG-----GCCCEEEECTTSBEEEESC-------CHHH
T ss_pred EccCCHHHHHHHHHHh----CCCCceeeecccccchHHHHHcCCC-----CCCcEEEECCCCEEEEccC-------CHHH
Confidence 998 466888888887 8999 8889874 6899999987 6789999999999999873 2455
Q ss_pred HHHHHHh
Q psy2878 157 TLRILDA 163 (181)
Q Consensus 157 ll~~l~~ 163 (181)
+.+.|++
T Consensus 136 l~~~l~~ 142 (143)
T 4fo5_A 136 LTEILKA 142 (143)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 5555543
No 61
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.95 E-value=3.1e-27 Score=170.27 Aligned_cols=137 Identities=12% Similarity=0.133 Sum_probs=120.9
Q ss_pred ccCccCCCcEEecccCCCCCCC-CCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhH-HHHHHHHHHHHHhcCcEEEE
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPE-ENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTE-ISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d-~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~-~~~l~~l~~~~~~~~~~vi~ 80 (181)
..|.++|+|++. + .+| +++++++++||++||+|| ++||++|..+ ++.|++++++|+++++.+++
T Consensus 4 ~~g~~~p~~~~~---------~~~~g----~~~~l~~~~gk~vlv~F~-a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~ 69 (160)
T 3lor_A 4 LDNAPLLELDVQ---------EWVNH----EGLSNEDLRGKVVVVEVF-QMLCPGCVNHGVPQAQKIHRMIDESQVQVIG 69 (160)
T ss_dssp CTTCCBCCCCEE---------EESSS----CCCCHHHHTTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEE
T ss_pred cCCCcCCCcccc---------cccCC----CccCHHHhCCCEEEEEEE-cCCCcchhhhhhHHHHHHHHHhCcCCcEEEE
Confidence 368999999999 7 789 999999999999999999 7799999996 99999999999988999999
Q ss_pred Eec-------CCHHHHHHHHHHcCCCcccceeEEEcCCch------HHHHhCCCCCCCcceeeEEEEcCCCcEEEEEecc
Q psy2878 81 GSS-------DNEFVKLAWRRENSNLYKLNHWQFSDTNGS------LIDQLGIRHETGVALRATFIFDPQNIIQHITVNN 147 (181)
Q Consensus 81 Is~-------d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~ 147 (181)
|+. ++.+..++|++++ +++|+++.|.+.. +++.||+. ..|++||||++|+|++++.+.
T Consensus 70 v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g~ 140 (160)
T 3lor_A 70 LHSVFEHHDVMTPEALKVFIDEF----GIKFPVAVDMPREGQRIPSTMKKYRLE-----GTPSIILADRKGRIRQVQFGQ 140 (160)
T ss_dssp EECCCSCGGGSCHHHHHHHHHHT----TCCSCEEEECCCTTCSSCHHHHHTTCC-----SSSEEEEECTTSBEEEEEESC
T ss_pred EeccccccccCCHHHHHHHHHHc----CCCCcEEECCccccchhhhHHHhcccC-----ccceEEEECCCCcEEEEecCc
Confidence 997 6888999999998 9999999999888 99999987 678999999999999998543
Q ss_pred CCCCCCHHHHHHHHHhhcc
Q psy2878 148 LNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 148 ~~~~~~~~~ll~~l~~l~~ 166 (181)
.+.+++.+.|+++..
T Consensus 141 ----~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 141 ----VDDFVLGLLLGSLLS 155 (160)
T ss_dssp ----CCHHHHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHHHh
Confidence 245667777766543
No 62
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.95 E-value=1.6e-26 Score=164.05 Aligned_cols=134 Identities=19% Similarity=0.264 Sum_probs=120.3
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecC--CCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHH-HhcCcEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITES--SFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDF-NERNAIL 78 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~--~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~-~~~~~~v 78 (181)
+.+|+++|+|++. +.+| ++++++ +++||++||+|| ++||+.|+.+++.|.++++++ .+.++.+
T Consensus 5 ~~~g~~~p~~~l~---------~~~g----~~~~l~~~~~~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~~ 70 (148)
T 3fkf_A 5 VTVGKSAPYFSLP---------NEKG----EKLSRSAERFRNRYLLLNFW-ASWCDPQPEANAELKRLNKEYKKNKNFAM 70 (148)
T ss_dssp CCTTSBCCCCCEE---------BTTS----CEECTTSTTTTTSEEEEEEE-CGGGCCCHHHHHHHHHHHHHTTTCTTEEE
T ss_pred ccCCCcCCCeEee---------CCCC----CEEeccccccCCcEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCCCeEE
Confidence 6799999999999 8999 999999 999999999999 889999999999999999999 8788999
Q ss_pred EEEecCC-HHHHHHHHHHcCCCcccceeEEEcC---CchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCH
Q psy2878 79 LGGSSDN-EFVKLAWRRENSNLYKLNHWQFSDT---NGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNP 154 (181)
Q Consensus 79 i~Is~d~-~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~ 154 (181)
++|+.|. .+..++|.+++ +++|+++.|. +..+++.||+. ..|++||||++|+|++.+. ..
T Consensus 71 v~v~~d~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~-------~~ 134 (148)
T 3fkf_A 71 LGISLDIDREAWETAIKKD----TLSWDQVCDFTGLSSETAKQYAIL-----TLPTNILLSPTGKILARDI-------QG 134 (148)
T ss_dssp EEEECCSCHHHHHHHHHHT----TCCSEEECCSCGGGCHHHHHTTCC-----SSSEEEEECTTSBEEEESC-------CH
T ss_pred EEEECCCCHHHHHHHHHHc----CCCceEEEccCCcchHHHHhcCCC-----CcCEEEEECCCCeEEEecC-------CH
Confidence 9999885 56888888887 8999999998 67999999987 6789999999999998883 56
Q ss_pred HHHHHHHHhhc
Q psy2878 155 IETLRILDAIQ 165 (181)
Q Consensus 155 ~~ll~~l~~l~ 165 (181)
+++.+.|+++.
T Consensus 135 ~~l~~~l~~ll 145 (148)
T 3fkf_A 135 EALTGKLKELL 145 (148)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 77777777654
No 63
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.95 E-value=1.3e-26 Score=171.10 Aligned_cols=140 Identities=14% Similarity=0.145 Sum_probs=121.3
Q ss_pred CccCccCCCcEEecccCCCCCCCC--CcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCc---
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEE--NNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNA--- 76 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~--- 76 (181)
+..|.++|+|+++ +. +| ++++|++++||++||+|| ++||+.|+.+++.|++++++|+++++
T Consensus 31 ~~~g~~~p~f~l~---------~~~~~g----~~~~l~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~~~ 96 (183)
T 3lwa_A 31 EADRQQLPDIGGD---------SLMEEG----TQINLSDFENQVVILNAW-GQWCAPCRSESDDLQIIHEELQAAGNGDT 96 (183)
T ss_dssp GGGCCCCCCCEEE---------BSSSTT----CEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHCC---C
T ss_pred cccCCCCCceecc---------ccccCC----cEecHHHhCCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4678999999999 88 99 999999999999999999 89999999999999999999999989
Q ss_pred ---EEEEEecCC--HHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCC
Q psy2878 77 ---ILLGGSSDN--EFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVG 151 (181)
Q Consensus 77 ---~vi~Is~d~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~ 151 (181)
.+++|+.|. .+..++|++++ +++|+++.|++..+.+.|+.+... ..|++||||++|+|++++.+.
T Consensus 97 ~~v~~v~v~~d~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~~g~---- 166 (183)
T 3lwa_A 97 PGGTVLGINVRDYSRDIAQDFVTDN----GLDYPSIYDPPFMTAASLGGVPAS--VIPTTIVLDKQHRPAAVFLRE---- 166 (183)
T ss_dssp CSEEEEEEECSCCCHHHHHHHHHHT----TCCSCEEECTTCGGGGGTTTCCTT--CCSEEEEECTTSCEEEEECSC----
T ss_pred CCcEEEEEECCCCCHHHHHHHHHHc----CCCccEEECCcchHHHHhccCCCC--CCCeEEEECCCCcEEEEEcCC----
Confidence 999999987 88899999998 999999999999999999743211 467999999999999998532
Q ss_pred CCHHHHHHHHHhhc
Q psy2878 152 RNPIETLRILDAIQ 165 (181)
Q Consensus 152 ~~~~~ll~~l~~l~ 165 (181)
...+++.+.|+++.
T Consensus 167 ~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 167 VTSKDVLDVALPLV 180 (183)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 35677777777654
No 64
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.95 E-value=6.5e-27 Score=173.01 Aligned_cols=144 Identities=15% Similarity=0.214 Sum_probs=123.8
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|..+|+|++. |.+| +++++++++||++||+|| ++||++|+.+++.|+++++++++.++.+++|
T Consensus 34 ~~~g~~~p~f~l~---------~~~G----~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 99 (186)
T 1jfu_A 34 ASAPLKLPDLAFE---------DADG----KPKKLSDFRGKTLLVNLW-ATWCVPCRKEMPALDELQGKLSGPNFEVVAI 99 (186)
T ss_dssp CCSCCBCCCCEEE---------CTTS----CEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHCBTTEEEEEE
T ss_pred ccCCCcCCCcEeE---------cCCC----CEeeHHHcCCCEEEEEEE-eCCCHhHHHHHHHHHHHHHHhccCCcEEEEE
Confidence 5689999999999 8999 999999999999999999 8899999999999999999999889999999
Q ss_pred ecCCH--HHHHHHHHHcCCCccc-ceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 82 SSDNE--FVKLAWRRENSNLYKL-NHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 82 s~d~~--~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
+.|.. +..++|++++ ++ .|+++.|++..+++.|++. .. ...|++||||++|+|++++.+. ...+.+++
T Consensus 100 ~~d~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~--~~~P~~~lid~~G~i~~~~~g~--~~~~~~~l 171 (186)
T 1jfu_A 100 NIDTRDPEKPKTFLKEA----NLTRLGYFNDQKAKVFQDLKAIGRA--LGMPTSVLVDPQGCEIATIAGP--AEWASEDA 171 (186)
T ss_dssp ECCCSCTTHHHHHHHHT----TCCTTCCEECTTCHHHHHHHTTTCC--SSSSEEEEECTTSBEEEEEESC--CCTTSHHH
T ss_pred ECCCCCHHHHHHHHHHc----CCCCCceEECCcchHHHHhcccccc--CCCCEEEEECCCCCEEEEEecC--CccCHHHH
Confidence 99864 6788999987 77 5999999999999999985 22 2467999999999999998532 33456788
Q ss_pred HHHHHhhccC
Q psy2878 158 LRILDAIQTG 167 (181)
Q Consensus 158 l~~l~~l~~~ 167 (181)
++.|+++..+
T Consensus 172 ~~~l~~ll~~ 181 (186)
T 1jfu_A 172 LKLIRAATGK 181 (186)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhcc
Confidence 8888877654
No 65
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=2.6e-27 Score=170.95 Aligned_cols=139 Identities=17% Similarity=0.310 Sum_probs=123.6
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++.+|+++|+|++. |.+| +.+++++++||++||+|| ++||+.|..+++.|.++++++.+.++.+++
T Consensus 14 ~~~~G~~~p~f~l~---------~~~g----~~~~l~~~~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~ 79 (158)
T 3hdc_A 14 LVRTGALAPNFKLP---------TLSG----ENKSLAQYRGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSFPKGDLVVLA 79 (158)
T ss_dssp CCCTTSBCCCCEEE---------CTTS----CEEESGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHSSTTSEEEEE
T ss_pred ccCCCCcCCCceeE---------cCCC----CEEehHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHcccCCeEEEE
Confidence 36799999999999 8999 999999999999999999 899999999999999999999988999999
Q ss_pred EecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHH
Q psy2878 81 GSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRI 160 (181)
Q Consensus 81 Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~ 160 (181)
|+.|. ..++|.+++ +++|+++.|.+..+++.|++. ..|++||||++|+|++++. .....+.+++++.
T Consensus 80 v~~d~--~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~--G~~~~~~~~~~~~ 146 (158)
T 3hdc_A 80 VNVEK--RFPEKYRRA----PVSFNFLSDATGQVQQRYGAN-----RLPDTFIVDRKGIIRQRVT--GGIEWDAPKVVSY 146 (158)
T ss_dssp EECSS--SCCGGGGGC----CCSCEEEECTTSHHHHHTTCC-----SSSEEEEECTTSBEEEEEE--SCCCTTSHHHHHH
T ss_pred EeCCH--HHHHHHHHc----CCCceEEECchHHHHHHhCCC-----CcceEEEEcCCCCEEEEEe--CCCccchHHHHHH
Confidence 99988 455666666 899999999999999999987 6789999999999999995 4445677888888
Q ss_pred HHhhcc
Q psy2878 161 LDAIQT 166 (181)
Q Consensus 161 l~~l~~ 166 (181)
+++.+.
T Consensus 147 ~~~~~~ 152 (158)
T 3hdc_A 147 LKSLEG 152 (158)
T ss_dssp HHTTC-
T ss_pred HHhhcc
Confidence 887653
No 66
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.95 E-value=9.4e-27 Score=174.84 Aligned_cols=156 Identities=12% Similarity=0.126 Sum_probs=117.4
Q ss_pred CccCccC--CCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCC-ChhHHHHHHHHHHHHHhc---C
Q psy2878 2 KTIGQSL--SSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFV-CPTEISEYNKLVKDFNER---N 75 (181)
Q Consensus 2 l~~G~~~--P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~-C~~~~~~l~~l~~~~~~~---~ 75 (181)
..+|+++ |+|++. |.+| +++++++++||++||+|| ++||+. |+.+++.|+++++++.++ +
T Consensus 13 ~~~g~~~~~p~f~l~---------d~~G----~~v~l~~~~Gk~vlv~F~-at~C~~vC~~~~~~l~~l~~~~~~~~~~~ 78 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLE---------DMYG----NEFTEKNLLGKFSIIYFG-FSNCPDICPDELDKLGLWLNTLSSKYGIT 78 (200)
T ss_dssp ---CCCCCCCCCEEE---------ETTS----CEEEGGGGTTSCEEEEEE-CTTCCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hccCCCCcCCCEEEE---------cCCC----CEEeHHHcCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHHHHhhCCc
Confidence 3578886 999999 8999 999999999999999998 889997 999999999999999864 8
Q ss_pred cEEEEEecC----CHHHHHHHHHHcCCCcccceeEEEc---CCchHHHHhCCC-CCC-----C-----cceeeEEEEcCC
Q psy2878 76 AILLGGSSD----NEFVKLAWRRENSNLYKLNHWQFSD---TNGSLIDQLGIR-HET-----G-----VALRATFIFDPQ 137 (181)
Q Consensus 76 ~~vi~Is~d----~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~gv~-~~~-----g-----~~~p~~~liD~~ 137 (181)
+++++||.| +++.+++|++++ +.+|+.+.+ ....+++.||+. ... | .+.|++||||++
T Consensus 79 v~vv~Is~D~~~d~~~~~~~~~~~~----~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~ 154 (200)
T 2b7k_A 79 LQPLFITCDPARDSPAVLKEYLSDF----HPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPE 154 (200)
T ss_dssp CEEEEEESCTTTCCHHHHHHHHTTS----CTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTT
T ss_pred eEEEEEECCCCCCCHHHHHHHHHHc----CCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCC
Confidence 999999998 578888888877 788888875 347899999986 211 1 145689999999
Q ss_pred CcEEEEEeccCCCCCCHHHHHHHHHhhccC---CccccCCC
Q psy2878 138 NIIQHITVNNLNVGRNPIETLRILDAIQTG---KLCACNRT 175 (181)
Q Consensus 138 g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~---~~~~~~~~ 175 (181)
|+|++.+.+........+++.+.|+.+... .-|+.+|-
T Consensus 155 G~i~~~~~g~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~~~ 195 (200)
T 2b7k_A 155 GQFVDALGRNYDEKTGVDKIVEHVKSYVPAEQRAKQKEAWY 195 (200)
T ss_dssp SCEEEEECTTCCTTHHHHHHHHHHHHCCCC-----------
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhcchhHHHHH
Confidence 999999854444444566777777777644 45888883
No 67
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.94 E-value=7.2e-27 Score=172.79 Aligned_cols=142 Identities=11% Similarity=0.036 Sum_probs=113.9
Q ss_pred CCccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q psy2878 1 MKTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLG 80 (181)
Q Consensus 1 ~l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~ 80 (181)
++++|+.+|+|+++ |.+| +++++++++||++||+|| ++||++|+.+++.|++++++|++++++|++
T Consensus 20 ~~~~g~~~p~f~l~---------~~~G----~~~~l~~~~gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~ 85 (183)
T 2obi_A 20 DWRCARSMHEFSAK---------DIDG----HMVNLDKYRGFVCIVTNV-ASQCGKTEVNYTQLVDLHARYAECGLRILA 85 (183)
T ss_dssp CGGGCCSGGGCEEE---------BTTS----CEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred CCcccCcccceEEE---------cCCC----CEeeHHHcCCCEEEEEEe-CCCCCCcHHHHHHHHHHHHHHhcCCeEEEE
Confidence 46899999999999 8999 999999999999999998 889999999999999999999999999999
Q ss_pred EecC--------CHHHHHHHHHHcCCCcccceeEEE--cCCchHHH-Hh----------CCCCCCCcceeeEEEEcCCCc
Q psy2878 81 GSSD--------NEFVKLAWRRENSNLYKLNHWQFS--DTNGSLID-QL----------GIRHETGVALRATFIFDPQNI 139 (181)
Q Consensus 81 Is~d--------~~~~~~~~~~~~~~~~~~~~~~~~--D~~~~~~~-~~----------gv~~~~g~~~p~~~liD~~g~ 139 (181)
|+.| +.+.+++|++++ +++|+++. |.++..++ .| |+....-...|++||||++|+
T Consensus 86 vs~d~~~~~e~~~~~~~~~~~~~~----~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~ 161 (183)
T 2obi_A 86 FPCNQFGKQEPGSNEEIKEFAAGY----NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGC 161 (183)
T ss_dssp EECCCSTTCCCSCHHHHHHHHHTT----TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSC
T ss_pred EECCCCCCCCCCCHHHHHHHHHHc----CCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCC
Confidence 9975 577888999887 89999997 66655432 23 432000012479999999999
Q ss_pred EEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 140 IQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 140 i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
|++++.+. ...+++.+.|+++
T Consensus 162 i~~~~~g~----~~~~~l~~~i~~l 182 (183)
T 2obi_A 162 VVKRYGPM----EEPLVIEKDLPHY 182 (183)
T ss_dssp EEEEECTT----SCTHHHHTTSGGG
T ss_pred EEEEeCCC----CCHHHHHHHHHHh
Confidence 99998532 2345666666554
No 68
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.94 E-value=1.1e-26 Score=168.68 Aligned_cols=141 Identities=12% Similarity=0.043 Sum_probs=110.6
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+++|+.+|+|+++ |.+| +++++++++||++||+|| ++||++|+.+++.|++++++|+++++++++|
T Consensus 5 ~~~g~~~p~f~l~---------~~~G----~~~~l~~~~gk~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 70 (169)
T 2v1m_A 5 HKSWNSIYEFTVK---------DING----VDVSLEKYRGHVCLIVNV-ACKCGATDKNYRQLQEMHTRLVGKGLRILAF 70 (169)
T ss_dssp --CCCSGGGCEEE---------BTTS----CEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred ccCCcccccceee---------cCCC----CCccHHHcCCCEEEEEEe-eccCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 5789999999999 8999 999999999999999998 7899999999999999999999999999999
Q ss_pred ecC--------CHHHHHHH-HHHcCCCcccceeEEE--cCCchHHH-Hh--------CCCCCCCcceeeEEEEcCCCcEE
Q psy2878 82 SSD--------NEFVKLAW-RRENSNLYKLNHWQFS--DTNGSLID-QL--------GIRHETGVALRATFIFDPQNIIQ 141 (181)
Q Consensus 82 s~d--------~~~~~~~~-~~~~~~~~~~~~~~~~--D~~~~~~~-~~--------gv~~~~g~~~p~~~liD~~g~i~ 141 (181)
+.| +.+.+++| .+++ +++|+++. |.++..++ .| |+....-...|++||||++|+|+
T Consensus 71 ~~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~ 146 (169)
T 2v1m_A 71 PCNQFGGQEPWAEAEIKKFVTEKY----GVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPV 146 (169)
T ss_dssp ECCCSTTCCCSCHHHHHHHHHHHH----CCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEE
T ss_pred ECCccCCCCCCCHHHHHHHHHHhc----CCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEE
Confidence 985 36788888 5877 89999996 66665442 23 54310001247999999999999
Q ss_pred EEEeccCCCCCCHHHHHHHHHhh
Q psy2878 142 HITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 142 ~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+++.+.. +.+++.+.|+++
T Consensus 147 ~~~~g~~----~~~~l~~~i~~l 165 (169)
T 2v1m_A 147 KRYSPTT----APYDIEGDIMEL 165 (169)
T ss_dssp EEECTTS----CGGGGHHHHHHH
T ss_pred EEcCCCC----CHHHHHHHHHHH
Confidence 9985322 234555555544
No 69
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.94 E-value=5.8e-27 Score=173.20 Aligned_cols=136 Identities=10% Similarity=0.090 Sum_probs=109.9
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+++|+++|+|+++ |.+| +++++++++||++||+|| ++|||+|+.+++.|++++++|+++++++++|
T Consensus 23 ~~~g~~~p~f~l~---------~~~G----~~~~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~v~vv~v 88 (181)
T 2p31_A 23 MQQEQDFYDFKAV---------NIRG----KLVSLEKYRGSVSLVVNV-ASECGFTDQHYRALQQLQRDLGPHHFNVLAF 88 (181)
T ss_dssp ----CCGGGCEEE---------BTTS----CEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCcCCccCceEee---------cCCC----CEecHHHcCCCEEEEEEe-ccCCCCcHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 6789999999999 8999 999999999999999998 8899999999999999999999999999999
Q ss_pred ecC--------CHHHHHHHHHH-cCCCcccceeEEEc--CCchHHH---HhCCCCCCCccee-------eEEEEcCCCcE
Q psy2878 82 SSD--------NEFVKLAWRRE-NSNLYKLNHWQFSD--TNGSLID---QLGIRHETGVALR-------ATFIFDPQNII 140 (181)
Q Consensus 82 s~d--------~~~~~~~~~~~-~~~~~~~~~~~~~D--~~~~~~~---~~gv~~~~g~~~p-------~~~liD~~g~i 140 (181)
+.| +.+.+++|+++ + +++|+++.| .++..+. .|++. ..| ++||||++|+|
T Consensus 89 s~d~~~~~e~~~~~~~~~~~~~~~----~~~~p~~~~~d~~g~~~~~~~~~~~~-----~~P~~~~~~~~~~lid~~G~i 159 (181)
T 2p31_A 89 PCNQFGQQEPDSNKEIESFARRTY----SVSFPMFSKIAVTGTGAHPAFKYLAQ-----TSGKEPTWNFWKYLVAPDGKV 159 (181)
T ss_dssp ECCCSTTCCCSCHHHHHHHHHHHH----CCCSCBBCCCCCSSTTSCHHHHHHHH-----HHSCCCCSTTCEEEECTTSCE
T ss_pred ECcCCCCCCCCCHHHHHHHHHhhc----CCCceeEeecccCCccchhhhhhhhh-----cCCCccccceeEEEEcCCCCE
Confidence 986 57788899988 7 889999964 4443322 23332 245 89999999999
Q ss_pred EEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 141 QHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 141 ~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
++++.+. .+.+++.+.|+++
T Consensus 160 ~~~~~g~----~~~~~l~~~i~~l 179 (181)
T 2p31_A 160 VGAWDPT----VSVEEVRPQITAL 179 (181)
T ss_dssp EEEECTT----SCHHHHHHHHHTT
T ss_pred EEEeCCC----CCHHHHHHHHHHH
Confidence 9998532 3467888888765
No 70
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.94 E-value=2.5e-26 Score=165.23 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=111.2
Q ss_pred ccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
..|+.+|+|++. |.+| +++++++++||++||+|| ++||+.|+.+++.|++++++|+++++++++|+
T Consensus 10 ~~g~~~p~f~l~---------~~~G----~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~ 75 (152)
T 2lrt_A 10 IKEASIIDIQLK---------DLKG----NTRSLTDLKGKVVLIDFT-VYNNAMSAAHNLALRELYNKYASQGFEIYQIS 75 (152)
T ss_dssp SCTTCSCCCCEE---------BTTS----CEECTTTGGGSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred ccCCCCCCeEEE---------cCCC----CEEeHHHhCCCEEEEEEE-cCCChhhHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 478999999999 8999 999999999999999999 68999999999999999999999999999999
Q ss_pred cCCHHH-HHHHHHHcCCCcccceeEEEcCCch---HHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHH
Q psy2878 83 SDNEFV-KLAWRRENSNLYKLNHWQFSDTNGS---LIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETL 158 (181)
Q Consensus 83 ~d~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll 158 (181)
.|+... .++|.. +++|+++.|.++. +++.|++. ..|++||||++|+|++++.+ ..+.++.+
T Consensus 76 ~d~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g----~~~~e~~~ 140 (152)
T 2lrt_A 76 LDGDEHFWKTSAD------NLPWVCVRDANGAYSSYISLYNVT-----NLPSVFLVNRNNELSARGEN----IKDLDEAI 140 (152)
T ss_dssp CSCCHHHHHHHHT------TCSSEEEECSSGGGCHHHHHHTCC-----SCSEEEEEETTTEEEEETTT----CSCHHHHH
T ss_pred ccCCHHHHHHHHh------CCCceEEECCCCcchHHHHHcCcc-----cCceEEEECCCCeEEEecCC----HHHHHHHH
Confidence 987543 333332 4789999999886 99999987 57899999999999998842 24555555
Q ss_pred HHHHh
Q psy2878 159 RILDA 163 (181)
Q Consensus 159 ~~l~~ 163 (181)
..+.+
T Consensus 141 ~~~~~ 145 (152)
T 2lrt_A 141 KKLLE 145 (152)
T ss_dssp HHHHG
T ss_pred HHHHh
Confidence 55443
No 71
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.94 E-value=2.3e-26 Score=168.57 Aligned_cols=144 Identities=13% Similarity=0.151 Sum_probs=116.8
Q ss_pred CccCccCC-CcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCC-CChhHHHHHHHHHHHHHh--cCcE
Q psy2878 2 KTIGQSLS-SYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTF-VCPTEISEYNKLVKDFNE--RNAI 77 (181)
Q Consensus 2 l~~G~~~P-~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp-~C~~~~~~l~~l~~~~~~--~~~~ 77 (181)
|.+|+++| +|+++ |.+| +++++++++||++||+|| ++||| +|+.+++.|+++++++++ .+++
T Consensus 1 m~~G~~~P~~f~l~---------d~~G----~~v~l~~~~Gk~vll~F~-~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~ 66 (170)
T 3me7_A 1 MSLGTYVPGDITLV---------DSYG----NEFQLKNLKGKPIILSPI-YTHCRAACPLITKSLLKVIPKLGTPGKDFW 66 (170)
T ss_dssp -CTTCBCCTTCEEE---------ETTC----CEEEGGGGTTSCEEEEEE-CTTCCSHHHHHHHHHHTTHHHHCCBTTTBE
T ss_pred CCCCCcCCCCeEEE---------cCCc----CEEchHHhCCCEEEEEEE-CCCCCchhHHHHHHHHHHHHHhhhcCCceE
Confidence 46899999 99999 8999 999999999999999999 77997 699999999999999976 4699
Q ss_pred EEEEecC---CHHHHHHHHHHcCCCccc---ceeEEE--c--CCchHHHHhCCC-C--CCC-cceeeEEEEcCCCcEEEE
Q psy2878 78 LLGGSSD---NEFVKLAWRRENSNLYKL---NHWQFS--D--TNGSLIDQLGIR-H--ETG-VALRATFIFDPQNIIQHI 143 (181)
Q Consensus 78 vi~Is~d---~~~~~~~~~~~~~~~~~~---~~~~~~--D--~~~~~~~~~gv~-~--~~g-~~~p~~~liD~~g~i~~~ 143 (181)
+|+||.| +++.+++|++++ +. .|+++. | ...++++.||+. . ..+ .+.|++||||++|+|+++
T Consensus 67 vv~is~d~~d~~~~~~~~~~~~----~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 67 VITFTFDPKDTLEDIKRFQKEY----GIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp EEEEECCTTCCHHHHHHHHHHT----TCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHc----CCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 9999986 578889999987 53 354443 3 337889998875 1 111 346789999999999998
Q ss_pred EeccCCCCCCHHHHHHHHHhhcc
Q psy2878 144 TVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 144 ~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+.+ ...+.++++++|+++..
T Consensus 143 ~~g---~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 143 IYG---VNYNYLEFVNALRLARG 162 (170)
T ss_dssp EES---SSCCHHHHHHHHHHHTT
T ss_pred EeC---CCCCHHHHHHHHHHhhc
Confidence 842 23568999999988764
No 72
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.94 E-value=2.1e-26 Score=170.74 Aligned_cols=140 Identities=11% Similarity=0.049 Sum_probs=110.2
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+.+|+|+++ |.+| +++++++++||++||+|| ++|||+|+.+++.|++++++|+++++++++|
T Consensus 23 ~~~g~~~p~f~l~---------~~~G----~~v~l~~~~Gk~vlv~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~i 88 (185)
T 2gs3_A 23 MRCARSMHEFSAK---------DIDG----HMVNLDKYRGFVCIVTNV-ASQGGKTEVNYTQLVDLHARYAECGLRILAF 88 (185)
T ss_dssp GGGCCCGGGCEEE---------BTTS----CEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred ccCCCCcCCceeE---------cCCC----CEeeHHHcCCCEEEEEEe-cCCCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 5689999999999 8999 999999999999999998 8899999999999999999999999999999
Q ss_pred ecC--------CHHHHHHHHHHcCCCcccceeEEE--cCCchHHH-Hh----------CCCCCCCcceeeEEEEcCCCcE
Q psy2878 82 SSD--------NEFVKLAWRRENSNLYKLNHWQFS--DTNGSLID-QL----------GIRHETGVALRATFIFDPQNII 140 (181)
Q Consensus 82 s~d--------~~~~~~~~~~~~~~~~~~~~~~~~--D~~~~~~~-~~----------gv~~~~g~~~p~~~liD~~g~i 140 (181)
+.| +.+.+++|++++ +++|+++. |.++..++ .| |+....-...|++||||++|+|
T Consensus 89 s~d~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i 164 (185)
T 2gs3_A 89 PCNQFGKQEPGSNEEIKEFAAGY----NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV 164 (185)
T ss_dssp ECCTTTTCCCSCHHHHHHHHHHT----TCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCE
T ss_pred ECcccCCCCCCCHHHHHHHHHHc----CCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCE
Confidence 975 367888999887 89999997 55554332 33 3220000124799999999999
Q ss_pred EEEEeccCCCCCCHHHHHHHHHh
Q psy2878 141 QHITVNNLNVGRNPIETLRILDA 163 (181)
Q Consensus 141 ~~~~~~~~~~~~~~~~ll~~l~~ 163 (181)
++++.+. ...+++.+.|++
T Consensus 165 ~~~~~g~----~~~~~l~~~i~~ 183 (185)
T 2gs3_A 165 VKRYGPM----EEPLVIEKDLPH 183 (185)
T ss_dssp EEEECTT----SCGGGGGGGHHH
T ss_pred EEeeCCC----CCHHHHHHHHHH
Confidence 9998532 223445555544
No 73
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.94 E-value=8.6e-26 Score=163.29 Aligned_cols=142 Identities=15% Similarity=0.201 Sum_probs=120.3
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+++|+|++. |.+| +++++++++||++||+|| ++||+.|..+++.|+++++++++.++.+++|
T Consensus 8 ~~~g~~~p~~~l~---------~~~g----~~~~l~~~~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v 73 (165)
T 3or5_A 8 DARPTPAPSFSGV---------TVDG----KPFSSASLKGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWASRGFTFVGI 73 (165)
T ss_dssp CCCCCBCCCCEEE---------CTTS----CEEEGGGGTTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred hcCCCCCCCceee---------CCCC----CEechhHcCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 5789999999999 8999 999999999999999999 9999999999999999999999989999999
Q ss_pred ecCC-HHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC-CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHH
Q psy2878 82 SSDN-EFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR-HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLR 159 (181)
Q Consensus 82 s~d~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~-~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~ 159 (181)
+.|. .+..++|++++ +++|+++.|.+ ++.+.|+.+ ...-...|++||||++|+|++.+.+. ...+++.+
T Consensus 74 ~~d~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~----~~~~~l~~ 144 (165)
T 3or5_A 74 AVNEQLPNVKNYMKTQ----GIIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGP----RSKADFDR 144 (165)
T ss_dssp ECSCCHHHHHHHHHHH----TCCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSC----CCHHHHHH
T ss_pred ECCCCHHHHHHHHHHc----CCCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCC----CCHHHHHH
Confidence 9886 77888999988 99999999965 889999543 11112578999999999999888432 24677777
Q ss_pred HHHhhcc
Q psy2878 160 ILDAIQT 166 (181)
Q Consensus 160 ~l~~l~~ 166 (181)
.|+++..
T Consensus 145 ~l~~~l~ 151 (165)
T 3or5_A 145 IVKMALG 151 (165)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 7776653
No 74
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.94 E-value=2.8e-26 Score=166.80 Aligned_cols=141 Identities=15% Similarity=0.151 Sum_probs=108.8
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+++|+.+|+|++. |.+| +++++++++||++||+|| ++||++|+.+++.|++++++++++++.+++|
T Consensus 6 ~~~g~~~p~f~l~---------~~~g----~~~~l~~~~gk~vll~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 71 (170)
T 2p5q_A 6 SKNPESVHDFTVK---------DAKE----NDVDLSIFKGKVLLIVNV-ASKCGMTNSNYAEMNQLYEKYKDQGLEILAF 71 (170)
T ss_dssp ----CCGGGCEEE---------BTTS----CEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCCccccceEEE---------cCCC----CEecHHHhCCCEEEEEEE-eccCCccHHHHHHHHHHHHHhccCCEEEEEE
Confidence 5689999999999 8999 999999999999999999 6899999999999999999999999999999
Q ss_pred ecC--------CHHHHHHHHH-HcCCCcccceeEE--EcCCchHHH-H--------hCCCCCCCcc-eeeEEEEcCCCcE
Q psy2878 82 SSD--------NEFVKLAWRR-ENSNLYKLNHWQF--SDTNGSLID-Q--------LGIRHETGVA-LRATFIFDPQNII 140 (181)
Q Consensus 82 s~d--------~~~~~~~~~~-~~~~~~~~~~~~~--~D~~~~~~~-~--------~gv~~~~g~~-~p~~~liD~~g~i 140 (181)
+.| +.+.+++|++ ++ +++|+++ .|.++..++ . +++.. .+++ .|++||||++|+|
T Consensus 72 s~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~-~~~p~~~~~~lid~~G~i 146 (170)
T 2p5q_A 72 PCNQFGEEEPGTNDQITDFVCTRF----KSEFPIFDKIDVNGENASPLYRFLKLGKWGIFG-DDIQWNFAKFLVNKDGQV 146 (170)
T ss_dssp ECCTTTTCCCSCHHHHHHHHHHHT----CCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTC-SCCCSTTCEEEECTTSCE
T ss_pred ECCCCCCCCCCCHHHHHHHHHHhc----CCCceeEeeeccCCCchHHHHHHHHhcCCCccC-CcccccccEEEECCCCCE
Confidence 985 5778888988 66 8899999 577655432 1 24410 1222 2399999999999
Q ss_pred EEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 141 QHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 141 ~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
++++.+. .+.+++.+.|+++.
T Consensus 147 ~~~~~g~----~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 147 VDRYYPT----TSPLSLERDIKQLL 167 (170)
T ss_dssp EEEECTT----SCGGGGHHHHHHHT
T ss_pred EEeeCCC----CCHHHHHHHHHHHh
Confidence 9998532 23345556665543
No 75
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.94 E-value=8.6e-27 Score=173.20 Aligned_cols=141 Identities=13% Similarity=0.128 Sum_probs=110.9
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
|..+.++|+|+++ |.+| ++++|++++||++||+|| ++|||+|+.+++.|++++++|+++++++|+|
T Consensus 20 ~~~~~~~p~f~l~---------d~~G----~~~~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 85 (187)
T 3dwv_A 20 MSAASSIFDFEVL---------DADH----KPYNLVQHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAF 85 (187)
T ss_dssp CTTCCSGGGSCCB---------BTTS----CBCCGGGGTTSCEEEEEE-CCBCSCCTTHHHHHHHHHHHHGGGTCEEEEE
T ss_pred hcCCCccCCeEEE---------cCCC----CEeeHHHhCCCEEEEEEe-cCCCCCcHHHHHHHHHHHHHhhhCCeEEEEE
Confidence 6678999999999 9999 999999999999999998 8899999999999999999999999999999
Q ss_pred ecC--------CHHHHHHHHHHcCCCcccceeEEE--cCCchHHH-Hh--------CCCCCCCc-cee---eEEEEcCCC
Q psy2878 82 SSD--------NEFVKLAWRRENSNLYKLNHWQFS--DTNGSLID-QL--------GIRHETGV-ALR---ATFIFDPQN 138 (181)
Q Consensus 82 s~d--------~~~~~~~~~~~~~~~~~~~~~~~~--D~~~~~~~-~~--------gv~~~~g~-~~p---~~~liD~~g 138 (181)
+.| +.+.+++|+++ .++++|+++. |.++..+. .| +++ +. ..| ++||||++|
T Consensus 86 s~d~~~~~e~~~~~~~~~~~~~---~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~---~~~~iP~~~~~~liD~~G 159 (187)
T 3dwv_A 86 PSNQFGGQEPGNEEEIKEFVCT---KFKAEFPIMAKINVNGENAHPLYEYMKKTKPGIL---ATKAIKWNFTSFLIDRDG 159 (187)
T ss_dssp EBCCCSSCSSSBTTHHHHSCCB---CCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSB---SSSSCCSTTCEEEECTTS
T ss_pred ECcccCCCCCCCHHHHHHHHHh---ccCCCCceeeccccCCcchhHHHHHHHhhcCCcc---CCCccccceeEEEECCCC
Confidence 986 35566666652 2489999997 55544332 22 332 21 355 999999999
Q ss_pred cEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 139 IIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+|++++.+. ...+++.+.|+++..
T Consensus 160 ~i~~~~~g~----~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 160 VPVERFSPG----ASVKDIEEKLIPLLG 183 (187)
T ss_dssp CEEEEECTT----CCHHHHHHHHHHHC-
T ss_pred CEEEEECCC----CCHHHHHHHHHHHHh
Confidence 999998532 345677777776654
No 76
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.94 E-value=2.6e-26 Score=170.88 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=112.2
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+..|+.+|+|+++ |.+| +++++++++||++||+|| ++||++|+.+++.|++++++|+++++++|+|
T Consensus 22 ~~~~~~~p~f~l~---------~~~G----~~~~l~~~~Gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 87 (190)
T 2vup_A 22 MSAASSIFDFEVL---------DADH----KPYNLVQHKGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAF 87 (190)
T ss_dssp --CCCSGGGSCCB---------BTTS----SBCCGGGGTTSCEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCCCCcccCeEEE---------cCCC----CEEEHHHcCCCEEEEEEe-cCCCCccHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 5678999999999 8999 999999999999999998 7899999999999999999999999999999
Q ss_pred ecC--------CHHHHHHHH-HHcCCCcccceeEEE--cCCchHHH---------HhCCCCCCCccee------eEEEEc
Q psy2878 82 SSD--------NEFVKLAWR-RENSNLYKLNHWQFS--DTNGSLID---------QLGIRHETGVALR------ATFIFD 135 (181)
Q Consensus 82 s~d--------~~~~~~~~~-~~~~~~~~~~~~~~~--D~~~~~~~---------~~gv~~~~g~~~p------~~~liD 135 (181)
+.| +++.+++|+ +++ +++|+++. |.++.+++ .|++. ..| ++||||
T Consensus 88 s~d~~~~~~~~~~~~~~~~~~~~~----~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~-----~~P~i~~~~~~~lid 158 (190)
T 2vup_A 88 PCNQFGGQEPGNEEEIKEFVCTKF----KAEFPIMAKINVNGENAHPLYEYMKKTKPGIL-----KTKAIKWNFTSFLID 158 (190)
T ss_dssp ECCCSTTCCCSCHHHHHHHHHHHH----CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGG-----GCCSCCSTTCEEEEC
T ss_pred EcCccCCCCCCCHHHHHHHHHHhc----CCCeEEEeecccCcccccHHHHHHHhhcCCcC-----CCccccccceEEEEC
Confidence 987 678889999 787 88999997 55555332 23544 344 899999
Q ss_pred CCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 136 PQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 136 ~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
++|+|++++.+. ...+++.+.|+++.
T Consensus 159 ~~G~i~~~~~g~----~~~~~l~~~i~~ll 184 (190)
T 2vup_A 159 RDGVPVERFSPG----ASVKDIEKKLIPLL 184 (190)
T ss_dssp TTSCEEEEECTT----CCHHHHHHHHHHHH
T ss_pred CCCcEEEEECCC----CCHHHHHHHHHHHH
Confidence 999999998532 23466777666554
No 77
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.94 E-value=1.1e-25 Score=162.78 Aligned_cols=137 Identities=12% Similarity=0.152 Sum_probs=112.6
Q ss_pred cCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCC-ChhHHHHHHHHHHHHHh----cCcEEEEE
Q psy2878 7 SLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFV-CPTEISEYNKLVKDFNE----RNAILLGG 81 (181)
Q Consensus 7 ~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~-C~~~~~~l~~l~~~~~~----~~~~vi~I 81 (181)
.+|+|++. |.+| +++++++++||++||+|| ++||+. |+.+++.|+++++++++ .++++++|
T Consensus 2 ~ap~f~l~---------~~~G----~~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~v 67 (164)
T 2ggt_A 2 LGGPFSLT---------THTG----ERKTDKDYLGQWLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFI 67 (164)
T ss_dssp CCCCCEEE---------ETTS----CEEEGGGGTTCEEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEE
T ss_pred CCCCeEEE---------eCCC----CEEeHHHcCCCEEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEE
Confidence 57999999 8999 999999999999999998 789998 99999999999999987 48999999
Q ss_pred ecCC----HHHHHHHHHHcCCCcccceeEEE---cCCchHHHHhCCC-CC-----CC----cceeeEEEEcCCCcEEEEE
Q psy2878 82 SSDN----EFVKLAWRRENSNLYKLNHWQFS---DTNGSLIDQLGIR-HE-----TG----VALRATFIFDPQNIIQHIT 144 (181)
Q Consensus 82 s~d~----~~~~~~~~~~~~~~~~~~~~~~~---D~~~~~~~~~gv~-~~-----~g----~~~p~~~liD~~g~i~~~~ 144 (181)
|.|+ ++.+++|++++ +++|+++. |...++++.||+. .. .+ .+.+++||||++|+|++++
T Consensus 68 s~d~~~d~~~~~~~~~~~~----~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~ 143 (164)
T 2ggt_A 68 SIDPERDTKEAIANYVKEF----SPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYF 143 (164)
T ss_dssp ESCTTTCCHHHHHHHHHTT----CSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEE
T ss_pred EeCCCCCCHHHHHHHHHHc----CCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEe
Confidence 9875 67888999887 88999985 4456799999986 00 00 0123899999999999998
Q ss_pred eccCCCCCCHHHHHHHHHhhc
Q psy2878 145 VNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 145 ~~~~~~~~~~~~ll~~l~~l~ 165 (181)
.+. .+.+++.+.|+++.
T Consensus 144 ~g~----~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 144 GQN----KRKGEIAASIATHM 160 (164)
T ss_dssp ETT----CCHHHHHHHHHHHH
T ss_pred CCC----CCHHHHHHHHHHHH
Confidence 532 34577777777654
No 78
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.94 E-value=6.6e-26 Score=162.42 Aligned_cols=137 Identities=12% Similarity=0.165 Sum_probs=122.0
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+++|+|++. |.+| +++++++++ |++||+|| ++||+.|..+++.|.++++++ ++.+++|
T Consensus 5 l~~g~~~p~f~l~---------~~~g----~~~~l~~~~-k~vll~f~-~~~C~~C~~~~~~l~~l~~~~---~v~~v~v 66 (154)
T 3ia1_A 5 VKPGEPLPDFLLL---------DPKG----QPVTPATVS-KPAVIVFW-ASWCTVCKAEFPGLHRVAEET---GVPFYVI 66 (154)
T ss_dssp CCSBEECCCCCEE---------CTTS----CEECTTTSC-SSEEEEEE-CTTCHHHHHHHHHHHHHHHHH---CCCEEEE
T ss_pred CCCCCcCCceEEE---------CCCC----CEechHHcC-CeEEEEEE-cccChhHHHHHHHHHHHHHHc---CCeEEEE
Confidence 6899999999999 8999 999999999 99999999 889999999999999999999 8999999
Q ss_pred ec---CCHHHHHHHHHHcCCCcccceeEEEc---CCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHH
Q psy2878 82 SS---DNEFVKLAWRRENSNLYKLNHWQFSD---TNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPI 155 (181)
Q Consensus 82 s~---d~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~ 155 (181)
+. ++.+..++|++++ +++|+++.| .+..+++.|++. ..|++||||++|+|++.+.+. ...+
T Consensus 67 ~~d~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g~----~~~~ 133 (154)
T 3ia1_A 67 SREPRDTREVVLEYMKTY----PRFIPLLASDRDRPHEVAARFKVL-----GQPWTFVVDREGKVVALFAGR----AGRE 133 (154)
T ss_dssp ECCTTCCHHHHHHHHTTC----TTEEECBCCSSCCHHHHHTTSSBC-----SSCEEEEECTTSEEEEEEESB----CCHH
T ss_pred eCCCcccHHHHHHHHHHc----CCCcccccccccchHHHHHHhCCC-----cccEEEEECCCCCEEEEEcCC----CCHH
Confidence 99 7788888888887 899999998 678999999987 678999999999999988532 4578
Q ss_pred HHHHHHHhhccCCc
Q psy2878 156 ETLRILDAIQTGKL 169 (181)
Q Consensus 156 ~ll~~l~~l~~~~~ 169 (181)
++.+.|+++.....
T Consensus 134 ~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 134 ALLDALLLAGADLE 147 (154)
T ss_dssp HHHHHHHHTTCCC-
T ss_pred HHHHHHHhccCccc
Confidence 89999988876543
No 79
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.94 E-value=5.6e-26 Score=167.25 Aligned_cols=121 Identities=22% Similarity=0.396 Sum_probs=106.1
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+++|+|++. |.+| ..+++++++++||++||+|| ++||++|+.+++.|++++++ ++.+++|
T Consensus 30 ~~~G~~~P~f~l~---------~~~g--~~~~~~l~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~v 93 (176)
T 3kh7_A 30 ALIGKPFPAFDLP---------SVQD--PARRLTEADLKGKPALVNVW-GTWCPSCRVEHPELTRLAEQ----GVVIYGI 93 (176)
T ss_dssp TTTTSBCCCCEEE---------BSSC--TTSEEEGGGGCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCEEEEE
T ss_pred cccCCcCCCcEec---------ccCC--CCceecHHHhCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHC----CCEEEEE
Confidence 6799999999999 6555 11579999999999999999 88999999999999998775 7999999
Q ss_pred ec-CCHHHHHHHHHHcCCCccccee-EEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEecc
Q psy2878 82 SS-DNEFVKLAWRRENSNLYKLNHW-QFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNN 147 (181)
Q Consensus 82 s~-d~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~ 147 (181)
+. ++.+..++|++++ +++|+ ++.|.+..+++.|++. ..|++||||++|+|++.+.+.
T Consensus 94 s~~d~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g~ 152 (176)
T 3kh7_A 94 NYKDDNAAAIKWLNEL----HNPYLLSISDADGTLGLDLGVY-----GAPETYLIDKQGIIRHKIVGV 152 (176)
T ss_dssp EESCCHHHHHHHHHHT----TCCCSEEEEETTCHHHHHHTCC-----SSCEEEEECTTCBEEEEEESC
T ss_pred eCCCCHHHHHHHHHHc----CCCCceEEECCcchHHHHcCCC-----CCCeEEEECCCCeEEEEEcCC
Confidence 94 6788999999987 88888 5889999999999987 678999999999999998643
No 80
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.94 E-value=8.5e-26 Score=160.11 Aligned_cols=139 Identities=12% Similarity=0.160 Sum_probs=119.9
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
|.+|+++|+|+++.. |.+| +++++++++||++||+|| ++||+.|..+++.|+++++++.++ +.+++|
T Consensus 1 l~~g~~~P~f~~~~~-------~~~g----~~~~~~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v 67 (148)
T 2b5x_A 1 MKLRQPMPELTGEKA-------WLNG----EVTREQLIGEKPTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ-LNVVAV 67 (148)
T ss_dssp CCTTCBCCCCCCCSE-------EESC----CCCHHHHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEE
T ss_pred CCCCCCCCCCccccc-------cccC----cccchhhcCCCEEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-cEEEEE
Confidence 568999999999311 7889 999999999999999999 889999999999999999999877 999999
Q ss_pred ecC------CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHH
Q psy2878 82 SSD------NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPI 155 (181)
Q Consensus 82 s~d------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~ 155 (181)
+.| +.+..++|++++ +++|+++.|.+..+++.|++. ..|+++|||++|++++++.+. ...+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g~----~~~~ 134 (148)
T 2b5x_A 68 HMPRSEDDLDPGKIKETAAEH----DITQPIFVDSDHALTDAFENE-----YVPAYYVFDKTGQLRHFQAGG----SGMK 134 (148)
T ss_dssp ECCCSTTTSSHHHHHHHHHHT----TCCSCEEECSSCHHHHHTCCC-----CSSEEEEECTTCBEEEEEESC----STTH
T ss_pred EcCCCccccCHHHHHHHHHHc----CCCcceEECCchhHHHHhCCC-----CCCEEEEECCCCcEEEEecCC----CCHH
Confidence 986 578889999987 899999999999999999987 678999999999999988532 2456
Q ss_pred HHHHHHHhhcc
Q psy2878 156 ETLRILDAIQT 166 (181)
Q Consensus 156 ~ll~~l~~l~~ 166 (181)
++.+.|+++..
T Consensus 135 ~l~~~l~~~l~ 145 (148)
T 2b5x_A 135 MLEKRVNRVLA 145 (148)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 67777766543
No 81
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.94 E-value=1.3e-25 Score=158.69 Aligned_cols=132 Identities=14% Similarity=0.216 Sum_probs=115.6
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
+.+|+++|+|++. |.+| +.+++++ +||++||+|| ++||+.|+.+++.|.++++++.+.++.+++|
T Consensus 9 ~~~g~~~p~~~l~---------~~~g----~~~~l~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v 73 (145)
T 3erw_A 9 EKQPAVPAVFLMK---------TIEG----EDISIPN-KGQKTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTV 73 (145)
T ss_dssp ---CCSCCEEEEE---------CTTS----CEEEESC-TTSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEE
T ss_pred ccCCCcCCCceee---------cCCC----CEEeHHH-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 4689999999999 8999 9999999 9999999999 9999999999999999999998788999999
Q ss_pred ecC----CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 82 SSD----NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 82 s~d----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
+.| +.+..++|.+++ +++|+++.|.+..+++.|++. ..|++||||++|+|++.+.+. ...+++
T Consensus 74 ~~d~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g~----~~~~~l 140 (145)
T 3erw_A 74 NLVNSEQNQQVVEDFIKAN----KLTFPIVLDSKGELMKEYHII-----TIPTSFLLNEKGEIEKTKIGP----MTAEQL 140 (145)
T ss_dssp ECGGGSSCHHHHHHHHHHT----TCCSCEEECSSSHHHHHTTCC-----EESEEEEECTTCCEEEEEESC----CCHHHH
T ss_pred EccCCcCCHHHHHHHHHHc----CCceeEEEcCchhHHHhcCcC-----ccCeEEEEcCCCcEEEEEcCC----cCHHHH
Confidence 985 678888999887 899999999999999999987 788999999999999988532 345566
Q ss_pred HHHH
Q psy2878 158 LRIL 161 (181)
Q Consensus 158 l~~l 161 (181)
.+.|
T Consensus 141 ~~~l 144 (145)
T 3erw_A 141 KEWT 144 (145)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 5554
No 82
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.93 E-value=7.9e-26 Score=166.87 Aligned_cols=144 Identities=9% Similarity=0.099 Sum_probs=110.4
Q ss_pred ccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
.+|..+|+|++. |.+| +++++++++||++||+|| ++|||+|+.+++.|++++++|+++++.||+||
T Consensus 13 ~~~~~~p~f~l~---------d~~G----~~v~l~~~~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is 78 (180)
T 3kij_A 13 PKINSFYAFEVK---------DAKG----RTVSLEKYKGKVSLVVNV-ASDCQLTDRNYLGLKELHKEFGPSHFSVLAFP 78 (180)
T ss_dssp CCCCCGGGCEEE---------BTTS----CEEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred CCcCcccceEEe---------cCCC----CEecHHHcCCCEEEEEEE-ecCCCCcHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 578999999999 9999 999999999999999888 88999999999999999999999999999999
Q ss_pred cC--------CHHHHHHHHHH-cCCCcccceeEEEcCC--chHHH-HhCCC-CCCCcceee----EEEEcCCCcEEEEEe
Q psy2878 83 SD--------NEFVKLAWRRE-NSNLYKLNHWQFSDTN--GSLID-QLGIR-HETGVALRA----TFIFDPQNIIQHITV 145 (181)
Q Consensus 83 ~d--------~~~~~~~~~~~-~~~~~~~~~~~~~D~~--~~~~~-~~gv~-~~~g~~~p~----~~liD~~g~i~~~~~ 145 (181)
.| +.+.+++|+++ + +++|+++.+.+ +..+. .|+.. ...+ ..|+ +||||++|+|++++.
T Consensus 79 ~d~~~~~~~d~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~p~~~~~~~lid~~G~i~~~~~ 153 (180)
T 3kij_A 79 CNQFGESEPRPSKEVESFARKNY----GVTFPIFHKIKILGSEGEPAFRFLVDSSK-KEPRWNFWKYLVNPEGQVVKFWR 153 (180)
T ss_dssp CCCSTTCCCSCHHHHHHHHHHHH----CCCSCBBCCCCCSSTTCCHHHHHHHHHHT-CCCSSTTCEEEECTTSCEEEEEC
T ss_pred CCccccCCCCCHHHHHHHHHHhc----CCCCceeeeeeccCccccHHHHHHHhcCC-CCccccceEEEECCCCCEEEEEC
Confidence 64 67889999998 7 89999976422 21111 11111 0000 2356 999999999999996
Q ss_pred ccCCCCCCHHHHHHHHHhhc
Q psy2878 146 NNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 146 ~~~~~~~~~~~ll~~l~~l~ 165 (181)
+........+.+.+.|+++.
T Consensus 154 g~~~~~~l~~~i~~lL~~~~ 173 (180)
T 3kij_A 154 PEEPIEVIRPDIAALVRQVI 173 (180)
T ss_dssp TTCCGGGTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHh
Confidence 54444444455555555543
No 83
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.93 E-value=2.8e-25 Score=158.64 Aligned_cols=140 Identities=13% Similarity=0.179 Sum_probs=119.8
Q ss_pred CCccCccCC-CcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q psy2878 1 MKTIGQSLS-SYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79 (181)
Q Consensus 1 ~l~~G~~~P-~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi 79 (181)
++.+|+++| +|++. |.+| +++++++++||++||+|| ++||+.|+.+++.|+++++++.+.++.++
T Consensus 2 ~l~~G~~~p~~f~l~---------~~~g----~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v 67 (152)
T 2lja_A 2 SLRSGNPSAASFSYP---------DING----KTVSLADLKGKYIYIDVW-ATWCGPCRGELPALKELEEKYAGKDIHFV 67 (152)
T ss_dssp CTTTTCCCSSSCEEE---------ETTT----EEEESTTTTTSEEEEEEC-CSSCCGGGGTHHHHHHHHHHSTTSSEEEE
T ss_pred ccccCCCCCcccEee---------cCCC----CEeeHHHcCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHhccCCeEEE
Confidence 377999999 99999 8999 999999999999999999 88999999999999999999998899999
Q ss_pred EEecCC-HHHHHHHHHHcCCCcccc-eeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHH
Q psy2878 80 GGSSDN-EFVKLAWRRENSNLYKLN-HWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIET 157 (181)
Q Consensus 80 ~Is~d~-~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~l 157 (181)
+|+.|. .+..++|.+++ +++ ++++.|.+.++++.|++. ..|++||||++|+|++.+.+ ....+++
T Consensus 68 ~v~~d~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g----~~~~~~l 134 (152)
T 2lja_A 68 SLSCDKNKKAWENMVTKD----QLKGIQLHMGTDRTFMDAYLIN-----GIPRFILLDRDGKIISANMT----RPSDPKT 134 (152)
T ss_dssp EEECCSCHHHHHHHHHHH----TCCSEEEECSSCTHHHHHTTCC-----SSCCEEEECTTSCEEESSCC----CTTCHHH
T ss_pred EEEccCcHHHHHHHHHhc----CCCCceeecCcchhHHHHcCcC-----CCCEEEEECCCCeEEEccCC----CCCHHHH
Confidence 999886 46778888877 666 467778889999999987 67899999999999988732 1344677
Q ss_pred HHHHHhhccC
Q psy2878 158 LRILDAIQTG 167 (181)
Q Consensus 158 l~~l~~l~~~ 167 (181)
.+.|+++..+
T Consensus 135 ~~~l~~~~~~ 144 (152)
T 2lja_A 135 AEKFNELLGL 144 (152)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHhcc
Confidence 7777776543
No 84
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.93 E-value=7.6e-26 Score=164.10 Aligned_cols=132 Identities=13% Similarity=0.193 Sum_probs=116.9
Q ss_pred ccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
.+|+++|+|++. |.+| +++++++++||++||+|| ++||+.|..+++.|.++++++. ++.|++|+
T Consensus 12 ~~g~~~p~~~l~---------~~~g----~~~~l~~~~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~ 75 (165)
T 3ha9_A 12 EVLEREASFSLT---------TIDG----EVISLNNVGGDVVILWFM-AAWCPSCVYMADLLDRLTEKYR--EISVIAID 75 (165)
T ss_dssp HHHHHHHCCCEE---------BTTS----CEECGGGCCSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEE
T ss_pred cccCcCCCCEee---------cCCC----CEeeHHHhCCCEEEEEEE-CCCCcchhhhHHHHHHHHHHcC--CcEEEEEE
Confidence 578999999999 8999 999999999999999999 8999999999999999999998 89999999
Q ss_pred cC-------------------CHHHHHHHHHHcCCCccc-ceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEE
Q psy2878 83 SD-------------------NEFVKLAWRRENSNLYKL-NHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQH 142 (181)
Q Consensus 83 ~d-------------------~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~ 142 (181)
.| +.+..++|++++ ++ +|+++.| +.++++.|++. ..|++||||++|+|++
T Consensus 76 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d-~~~~~~~~~v~-----~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 76 FWTAEALKALGLNKPGYPPPDTPEMFRKFIANY----GDPSWIMVMD-DGSLVEKFNVR-----SIDYIVIMDKSSNVLY 145 (165)
T ss_dssp CCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHH----SCTTSEEEEC-CSHHHHHTTCC-----SSSEEEEEETTCCEEE
T ss_pred ecccccccccccccccCCCCCCHHHHHHHHHHc----CCCCeeEEeC-hHHHHHHhCCC-----CceEEEEEcCCCcEEE
Confidence 87 688899999988 88 9999999 99999999987 6789999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHhhc
Q psy2878 143 ITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 143 ~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
. +.. .+.+++.+.|+++.
T Consensus 146 -~-g~~---~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 146 -A-GTT---PSLGELESVIKSVQ 163 (165)
T ss_dssp -E-EES---CCHHHHHHHHHHC-
T ss_pred -e-CCC---CCHHHHHHHHHHHh
Confidence 2 221 15677777777764
No 85
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.93 E-value=8.3e-25 Score=160.41 Aligned_cols=146 Identities=14% Similarity=0.123 Sum_probs=112.2
Q ss_pred ccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCC-CChhHHHHHHHHHHHHHhc--CcEEE
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTF-VCPTEISEYNKLVKDFNER--NAILL 79 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp-~C~~~~~~l~~l~~~~~~~--~~~vi 79 (181)
.+|.++|+|+|. |.+| ++++|++++||++||+|| .+||| .|+.+++.|.++++.+++. ++++|
T Consensus 7 P~~~~~PdF~L~---------d~~G----~~v~l~d~~Gk~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v 72 (170)
T 4hde_A 7 PLNWDLETFQFT---------NQDG----KPFGTKDLKGKVWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEKLDVQFV 72 (170)
T ss_dssp CCCBCCCCCEEE---------CTTS----CEEEHHHHTTSCEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCcCCCcEEE---------CCCC----CEEeHHHhCCCEEEEEEE-CCCCCCcccHHHHHHHHHHHhhhcccccceeE
Confidence 478999999999 9999 999999999999999999 66897 7999999999999999875 48999
Q ss_pred EEecC----CHHHHHHHHHHcCCCcccceeEEEcCCc-hH----HHHhCCC-CC--CC--cceeeEEEEcCCCcEEEEEe
Q psy2878 80 GGSSD----NEFVKLAWRRENSNLYKLNHWQFSDTNG-SL----IDQLGIR-HE--TG--VALRATFIFDPQNIIQHITV 145 (181)
Q Consensus 80 ~Is~d----~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~----~~~~gv~-~~--~g--~~~p~~~liD~~g~i~~~~~ 145 (181)
+||.| +++.+++|++++ ......|.++.+.+. .+ ...|+.. .. .+ .+.+++||||++|+|+..+.
T Consensus 73 ~isvDp~~Dtp~~l~~y~~~~-~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~ 151 (170)
T 4hde_A 73 SFSVDPDLDKPENLKAFIQKF-TEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYS 151 (170)
T ss_dssp EEESCTTTCCHHHHHHHHTTT-CSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEE
T ss_pred eeecCcccccHHHHHHHHHHc-CCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEEC
Confidence 99975 477888888876 222345777776542 22 2335554 11 11 35678999999999999884
Q ss_pred ccCCCCCCHHHHHHHHHhhc
Q psy2878 146 NNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 146 ~~~~~~~~~~~ll~~l~~l~ 165 (181)
.......+++++.|++|.
T Consensus 152 --g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 152 --GISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp --SSSSCCHHHHHHHHHHHH
T ss_pred --CCCCCCHHHHHHHHHHHh
Confidence 223456788888888763
No 86
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.93 E-value=1e-25 Score=170.38 Aligned_cols=140 Identities=15% Similarity=0.159 Sum_probs=106.8
Q ss_pred ccCccCCCcEEecccCCCCCCCCC-cccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEEN-NVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~-G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
..++.+|+|+++ |.+ | ++++|++++||++||+|| ++|||+|+.++|.|++++++|+++|++||+|
T Consensus 21 ~~~~~~p~f~l~---------~~~~G----~~v~l~~~~Gk~vlv~Fw-atwC~~C~~e~p~l~~l~~~~~~~g~~vv~v 86 (208)
T 2f8a_A 21 QSMQSVYAFSAR---------PLAGG----EPVSLGSLRGKVLLIENV-ASLGGTTVRDYTQMNELQRRLGPRGLVVLGF 86 (208)
T ss_dssp -CCCCGGGCEEC---------BTTCS----SCEEGGGGTTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred hhcCccCceEee---------eCCCC----CCccHHHcCCCEEEEEEE-CCCCccHHHHHHHHHHHHHHccCCCeEEEEE
Confidence 467889999999 888 9 999999999999999998 8899999999999999999999999999999
Q ss_pred ecC--------CHHHHHHHHH------HcCCCcccceeEEEcCC--ch----HHH----HhCC--------C-C------
Q psy2878 82 SSD--------NEFVKLAWRR------ENSNLYKLNHWQFSDTN--GS----LID----QLGI--------R-H------ 122 (181)
Q Consensus 82 s~d--------~~~~~~~~~~------~~~~~~~~~~~~~~D~~--~~----~~~----~~gv--------~-~------ 122 (181)
+.| +.+.+++|++ ++ +++||+++|.+ +. +.+ .++. . .
T Consensus 87 ~~d~~~~~e~d~~~~i~~f~~~~~~~~~~----~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 162 (208)
T 2f8a_A 87 PCNQFGHQENAKNEEILNSLKYVRPGGGF----EPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITW 162 (208)
T ss_dssp ECCCSTTTTCSCHHHHHHHHHHTSSCTTC----CCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCS
T ss_pred ECCcccccCCCCHHHHHHHHHhccccccc----ccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccc
Confidence 986 4578888887 55 89999997533 22 221 2220 0 0
Q ss_pred ----CCCc-ceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 123 ----ETGV-ALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 123 ----~~g~-~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
..++ ..|++||||++|+|++++.+... .+++.+.|+++
T Consensus 163 ~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~----~~~l~~~I~~l 205 (208)
T 2f8a_A 163 SPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQ----TIDIEPDIEAL 205 (208)
T ss_dssp SSCCTTCCCSTTCEEEECTTSCEEEEECTTSC----GGGGHHHHHHH
T ss_pred cccccCccccCceEEEEcCCCcEEEEeCCCCC----HHHHHHHHHHH
Confidence 0012 24899999999999999953322 24555555544
No 87
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.93 E-value=1.1e-25 Score=161.13 Aligned_cols=125 Identities=12% Similarity=0.128 Sum_probs=109.2
Q ss_pred CCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccce
Q psy2878 25 ENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNH 104 (181)
Q Consensus 25 ~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~ 104 (181)
.+| +++++++++||++||+|| ++||++|+.+++.|.++++++++.++.+++|+.|+.+.+++|++++ +++|
T Consensus 12 ~~G----~~~~l~~~~gk~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~----~~~~ 82 (151)
T 3raz_A 12 KDN----TPQSLQSLKAPVRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQT----PVSY 82 (151)
T ss_dssp TTC----CEECGGGCCSSEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHS----CCSS
T ss_pred cCC----CEecHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHc----CCCC
Confidence 688 999999999999999999 8899999999999999999998889999999999999999999998 9999
Q ss_pred eEEEcCC---chHHHHhC--CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhccC
Q psy2878 105 WQFSDTN---GSLIDQLG--IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTG 167 (181)
Q Consensus 105 ~~~~D~~---~~~~~~~g--v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~ 167 (181)
+++.|.. ..+++.|| +. ..|++||||++|+|++++.+. ...+++.+.|+++..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 83 PIWRYTGANSRNFMKTYGNTVG-----VLPFTVVEAPKCGYRQTITGE----VNEKSLTDAVKLAHSK 141 (151)
T ss_dssp CEEEECCSCHHHHHHTTTCCSC-----CSSEEEEEETTTTEEEECCSC----CCHHHHHHHHHHHHTC
T ss_pred ceEecCccchHHHHHHhCCccC-----CCCEEEEECCCCcEEEEECCC----CCHHHHHHHHHHHHHH
Confidence 9998864 56888888 54 568999999999999988532 3467777777777654
No 88
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=158.19 Aligned_cols=135 Identities=10% Similarity=0.217 Sum_probs=111.3
Q ss_pred CCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCC-ChhHHHHHHHHHHHHHh----cCcEEEEEec
Q psy2878 9 SSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFV-CPTEISEYNKLVKDFNE----RNAILLGGSS 83 (181)
Q Consensus 9 P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~-C~~~~~~l~~l~~~~~~----~~~~vi~Is~ 83 (181)
|+|++. |.+| +++++++++||++||+|| ++||+. |+.+++.|++++++|++ .++++++||.
T Consensus 7 p~f~l~---------~~~G----~~~~l~~~~gk~vll~F~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~ 72 (171)
T 2rli_A 7 GDFHLL---------DHRG----RARCKADFRGQWVLMYFG-FTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITV 72 (171)
T ss_dssp SCCEEE---------ETTS----CEEETTTTTTSEEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEES
T ss_pred CCeEEE---------eCCC----CEEeHHHhCCCEEEEEEE-cCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEE
Confidence 899999 8999 999999999999999998 889997 99999999999999986 5899999998
Q ss_pred C----CHHHHHHHHHHcCCCcccceeEEEcCC---chHHHHhCCC-CC-C-----C---cceeeEEEEcCCCcEEEEEec
Q psy2878 84 D----NEFVKLAWRRENSNLYKLNHWQFSDTN---GSLIDQLGIR-HE-T-----G---VALRATFIFDPQNIIQHITVN 146 (181)
Q Consensus 84 d----~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~gv~-~~-~-----g---~~~p~~~liD~~g~i~~~~~~ 146 (181)
| +++.+++|++++ +++|+++.|.. .++++.||+. .. . + .+.|++||||++|+|++++.+
T Consensus 73 d~~~d~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g 148 (171)
T 2rli_A 73 DPERDDVEAMARYVQDF----HPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR 148 (171)
T ss_dssp CSTTCCHHHHHHHHHTT----CTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEES
T ss_pred CCCCCCHHHHHHHHHHc----CCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECC
Confidence 7 477888999887 88999998743 5799999987 11 0 0 134589999999999999853
Q ss_pred cCCCCCCHHHHHHHHHhhc
Q psy2878 147 NLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 147 ~~~~~~~~~~ll~~l~~l~ 165 (181)
. .+.+++.+.|+++.
T Consensus 149 ~----~~~~~l~~~l~~ll 163 (171)
T 2rli_A 149 S----RSAEQISDSVRRHM 163 (171)
T ss_dssp S----CCHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHHH
Confidence 2 24566777666554
No 89
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.93 E-value=7.6e-25 Score=166.43 Aligned_cols=139 Identities=14% Similarity=0.116 Sum_probs=107.6
Q ss_pred cCccCCCcEEecccCCCCCCCCC-cccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 4 IGQSLSSYRVIGVKPGFNLPEEN-NVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 4 ~G~~~P~f~l~~~~~~~~~~d~~-G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
.+..+|+|+++ |.+ | ++++|++++||++||+|| ++||+.|+ +++.|++++++|+++|++||+|+
T Consensus 31 ~~~~~pdF~l~---------d~~~G----~~v~Lsd~~GKvvll~Fw-At~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs 95 (215)
T 2i3y_A 31 EKGTIYDYEAI---------ALNKN----EYVSFKQYVGKHILFVNV-ATYCGLTA-QYPELNALQEELKPYGLVVLGFP 95 (215)
T ss_dssp CCCCGGGCEEE---------BSSSS----CEEEGGGGTTSEEEEEEE-CSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEE
T ss_pred ccCCcCCcEee---------eCCCC----CEEcHHHhCCCEEEEEEe-CCCCCChH-hHHHHHHHHHHhccCCeEEEEEE
Confidence 46789999999 899 9 999999999999999998 89999998 99999999999999999999999
Q ss_pred cC--------CHHHHHHHHH------HcCCCcccceeEEEcCC--chH-HHHhCC-----------CC-----------C
Q psy2878 83 SD--------NEFVKLAWRR------ENSNLYKLNHWQFSDTN--GSL-IDQLGI-----------RH-----------E 123 (181)
Q Consensus 83 ~d--------~~~~~~~~~~------~~~~~~~~~~~~~~D~~--~~~-~~~~gv-----------~~-----------~ 123 (181)
.| +.+.+++|++ ++ +++||++.|.+ +.. ...|+. .. .
T Consensus 96 ~d~f~~~e~~~~~~i~~f~~~~~~~~~~----~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~ 171 (215)
T 2i3y_A 96 CNQFGKQEPGDNKEILPGLKYVRPGGGF----VPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKV 171 (215)
T ss_dssp CCCSTTCCCSCHHHHHHHHHHTSSCTTC----CCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCT
T ss_pred ccccCcCCCCCHHHHHHHHHhccchhcc----CccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccc
Confidence 64 4577888988 66 89999998643 322 111211 10 0
Q ss_pred CCc-ceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 124 TGV-ALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 124 ~g~-~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
..+ ..|++||||++|+|++++.+. ...+++.+.|+++.
T Consensus 172 ~~i~~npttfLID~~G~vv~~~~g~----~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 172 HDIRWNFEKFLVGPDGIPVMRWSHR----ATVSSVKTDILAYL 210 (215)
T ss_dssp TCCCSTTCEEEECTTSCEEEEECTT----SCHHHHHHHHHHHG
T ss_pred cccccCceEEEECCCCeEEEEeCCC----CCHHHHHHHHHHHH
Confidence 011 136899999999999998532 23467777777664
No 90
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.93 E-value=2e-25 Score=180.83 Aligned_cols=136 Identities=13% Similarity=0.107 Sum_probs=119.2
Q ss_pred CccCccCCCcE-----EecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCc
Q psy2878 2 KTIGQSLSSYR-----VIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNA 76 (181)
Q Consensus 2 l~~G~~~P~f~-----l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~ 76 (181)
+.+|+++|+|+ +. |.+| +++++++++||++||+|| ++||++|+.+++.|++++++|+++++
T Consensus 51 l~vG~~aPdF~~~~~wL~---------d~dG----~~vsLsdl~GK~vLl~F~-atwC~~C~~~~p~L~~l~~~~~~~~v 116 (352)
T 2hyx_A 51 LESCGTAPDLKGITGWLN---------TPGN----KPIDLKSLRGKVVLIDFW-AYSCINCQRAIPHVVGWYQAYKDSGL 116 (352)
T ss_dssp CCCCCBCCCCCSCCEEES---------SGGG----CCCCGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTE
T ss_pred cCCCCcCCCccccccccC---------CCCC----CEEcHHHhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhhcCCe
Confidence 57899999999 77 8999 999999999999999999 79999999999999999999999899
Q ss_pred EEEEEecC------CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCC
Q psy2878 77 ILLGGSSD------NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNV 150 (181)
Q Consensus 77 ~vi~Is~d------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~ 150 (181)
.||+|+.| +++..++|++++ +++|+++.|.+..+++.|++. ..|++||||++|+|++++.+.
T Consensus 117 ~vi~Vs~d~~~~~d~~~~~~~~~~~~----~l~fpv~~D~~~~l~~~ygV~-----~~Pt~~lID~~G~Iv~~~~G~--- 184 (352)
T 2hyx_A 117 AVIGVHTPEYAFEKVPGNVAKGAANL----GISYPIALDNNYATWTNYRNR-----YWPAEYLIDATGTVRHIKFGE--- 184 (352)
T ss_dssp EEEEEECCSSGGGGCHHHHHHHHHHH----TCCSCEEECTTSHHHHHTTCC-----EESEEEEECTTSBEEEEEESB---
T ss_pred EEEEEECCcccccCCHHHHHHHHHHc----CCCccEEeCCcHHHHHHcCCC-----ccCEEEEEeCCCeEEEEEcCC---
Confidence 99999974 578889999988 899999999999999999987 678999999999999998643
Q ss_pred CCCHHHHHHHHHhh
Q psy2878 151 GRNPIETLRILDAI 164 (181)
Q Consensus 151 ~~~~~~ll~~l~~l 164 (181)
...+++.+.|+++
T Consensus 185 -~~~~~l~~~I~~l 197 (352)
T 2hyx_A 185 -GDYNVTETLVRQL 197 (352)
T ss_dssp -CCHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHH
Confidence 2344555554443
No 91
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.6e-26 Score=166.17 Aligned_cols=132 Identities=11% Similarity=0.148 Sum_probs=96.4
Q ss_pred CccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 5 GQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 5 G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
|..+|+|+++ |.+| ++++|++++||++||+|| ++||++|+ +++.|++++++|+++++.+++||.|
T Consensus 9 ~~~~~~f~l~---------d~~G----~~~~l~~~~Gk~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d 73 (171)
T 3cmi_A 9 MSEFYKLAPV---------DKKG----QPFPFDQLKGKVVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCN 73 (171)
T ss_dssp -CGGGGCCCB---------BTTS----CBCCGGGGTTCEEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred hhheeeeEEE---------cCCC----CEecHHHcCCCEEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECc
Confidence 6778999999 9999 999999999999999999 88999999 9999999999999999999999974
Q ss_pred --------CHHHHHHHH-HHcCCCcccceeEEEcCC--ch-HH--------HHhCCCCCCCccee------eEEEEcCCC
Q psy2878 85 --------NEFVKLAWR-RENSNLYKLNHWQFSDTN--GS-LI--------DQLGIRHETGVALR------ATFIFDPQN 138 (181)
Q Consensus 85 --------~~~~~~~~~-~~~~~~~~~~~~~~~D~~--~~-~~--------~~~gv~~~~g~~~p------~~~liD~~g 138 (181)
+.+.+++|+ +++ +++|+++.|.+ +. .+ +.|++. ..| ++||||++|
T Consensus 74 ~~~~~~~d~~~~~~~~~~~~~----~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~-----~~P~i~~~~~~~lid~~G 144 (171)
T 3cmi_A 74 QFGHQEPGSDEEIAQFCQLNY----GVTFPIMKKIDVNGGNEDPVYKFLKSQKSGML-----GLRGIKWNFEKFLVDKKG 144 (171)
T ss_dssp SCC----------------------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSS-----SCCSCCSTTCEEEECSSS
T ss_pred ccCCCCCCCHHHHHHHHHhcc----CCCceEEeeccCCCccchHHHHHHHhccCCcC-----CCCcccccceEEEECCCC
Confidence 556777888 766 89999998744 32 22 235554 356 899999999
Q ss_pred cEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 139 IIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+|++++.+.. +.+++.+.|+++
T Consensus 145 ~i~~~~~g~~----~~~~l~~~i~~l 166 (171)
T 3cmi_A 145 KVYERYSSLT----KPSSLSETIEEL 166 (171)
T ss_dssp CEEEEECTTS----CGGGGHHHHHHH
T ss_pred CEEEEeCCCC----CHHHHHHHHHHH
Confidence 9999985322 234455555444
No 92
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.92 E-value=9.1e-25 Score=165.12 Aligned_cols=139 Identities=13% Similarity=0.108 Sum_probs=104.5
Q ss_pred cCccCCCcEEecccCCCCCCCCC-cccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 4 IGQSLSSYRVIGVKPGFNLPEEN-NVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 4 ~G~~~P~f~l~~~~~~~~~~d~~-G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
....+|+|+++ |.+ | ++++|++++||++||+|| ++||+.| .+++.|++++++|+++|++||+||
T Consensus 13 ~~~~~pdF~l~---------d~~~G----~~v~Ls~~kGKvvll~F~-At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs 77 (207)
T 2r37_A 13 ISGTIYEYGAL---------TIDGE----EYIPFKQYAGKYVLFVNV-ASYGGLT-GQYIELNALQEELAPFGLVILGFP 77 (207)
T ss_dssp --CCGGGCEEE---------BTTSS----CEEEGGGGTTSEEEEEEE-CSSSTTT-THHHHHHHHHHHHGGGTEEEEEEE
T ss_pred ccCccCCeEee---------eCCCC----CEEcHHHhCCCEEEEEEe-CCCCCCh-HHHHHHHHHHHHhccCCEEEEEEE
Confidence 35679999999 899 9 999999999999999998 8999999 799999999999999999999999
Q ss_pred cC--------CHHHHHHHHH------HcCCCcccceeEEEcCC--chH-HHHhCCC--------CCC-------------
Q psy2878 83 SD--------NEFVKLAWRR------ENSNLYKLNHWQFSDTN--GSL-IDQLGIR--------HET------------- 124 (181)
Q Consensus 83 ~d--------~~~~~~~~~~------~~~~~~~~~~~~~~D~~--~~~-~~~~gv~--------~~~------------- 124 (181)
.| +.+.+++|++ ++ +++||++.|.+ +.. ...|+.. ...
T Consensus 78 ~d~f~~~e~~~~~~i~~f~~~~~~~~~~----~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~ 153 (207)
T 2r37_A 78 CNQFGKQEPGENSEILPTLKYVRPGGGF----VPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKV 153 (207)
T ss_dssp CCCBTTCCCSCHHHHHHHHHHTSSCTTC----CCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCT
T ss_pred CcccCcCCCCCHHHHHHHHHhcchhhcc----CccceeeeEeccCCcccchHHHHHHhhCcccccccccccccccccccc
Confidence 54 4578888998 66 89999998643 332 1112111 000
Q ss_pred -Cc-ceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 125 -GV-ALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 125 -g~-~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
.+ ..|++||||++|+|++++.+.. ..+++.+.|+++.
T Consensus 154 ~~i~~~~ttflID~~G~i~~~~~g~~----~~~~l~~~I~~ll 192 (207)
T 2r37_A 154 HDIRWNFEKFLVGPDGIPIMRWHHRT----TVSNVKMDILSYM 192 (207)
T ss_dssp TCCCSTTCEEEECTTSCEEEEECTTS----CHHHHHHHHHHHH
T ss_pred CcccccceEEEECCCCcEEEEECCCC----CHHHHHHHHHHHH
Confidence 11 2378999999999999985322 3355555555543
No 93
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.92 E-value=1.3e-24 Score=151.56 Aligned_cols=130 Identities=15% Similarity=0.291 Sum_probs=112.6
Q ss_pred cCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE-----
Q psy2878 7 SLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG----- 81 (181)
Q Consensus 7 ~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I----- 81 (181)
++|+|++. |.+| +++++++++||++||+|| ++||+.|..+++.|+++++++ ..++.+++|
T Consensus 1 ~~p~f~l~---------~~~g----~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~-~~~~~~v~i~~~~~ 65 (138)
T 4evm_A 1 EVADFELM---------GVDG----KTYRLSDYKGKKVYLKFW-ASWCSICLASLPDTDEIAKEA-GDDYVVLTVVSPGH 65 (138)
T ss_dssp CCCCCEEE---------BTTS----CEEEGGGGTTSEEEEEEC-CTTCHHHHHHHHHHHHHHHTC-TTTEEEEEEECTTS
T ss_pred CCCcceeE---------CCCC----CEEEHHHhCCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHh-CCCcEEEEEEcCCC
Confidence 48999999 8999 999999999999999999 889999999999999999984 457999999
Q ss_pred -ecCCHHHHHHHHHHcCCCccc-ceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHH
Q psy2878 82 -SSDNEFVKLAWRRENSNLYKL-NHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLR 159 (181)
Q Consensus 82 -s~d~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~ 159 (181)
+.++.+..++|.+++ ++ +|+++.|.+..+++.|++. ..|++||||++|+|++.+.+. ...+++.+
T Consensus 66 ~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g~----~~~~~l~~ 132 (138)
T 4evm_A 66 KGEQSEADFKNWYKGL----DYKNLPVLVDPSGKLLETYGVR-----SYPTQAFIDKEGKLVKTHPGF----MEKDAILQ 132 (138)
T ss_dssp TTCCCHHHHHHHHTTC----CCTTCCEEECTTCHHHHHTTCC-----SSSEEEEECTTCCEEEEEESC----CCHHHHHH
T ss_pred CchhhHHHHHHHHhhc----CCCCeeEEECcchHHHHHcCcc-----cCCeEEEECCCCcEEEeecCC----CcHHHHHH
Confidence 345677888888876 77 8999999999999999987 678999999999999998532 34677888
Q ss_pred HHHhh
Q psy2878 160 ILDAI 164 (181)
Q Consensus 160 ~l~~l 164 (181)
.|+++
T Consensus 133 ~l~~l 137 (138)
T 4evm_A 133 TLKEL 137 (138)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 87765
No 94
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=3.6e-27 Score=170.17 Aligned_cols=140 Identities=16% Similarity=0.227 Sum_probs=116.7
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHH-HHHHHH-hcCcEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNK-LVKDFN-ERNAILL 79 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~-l~~~~~-~~~~~vi 79 (181)
+.+|+.+|+|++. |.+| +++++++++||++||+|| ++||+.|+.+++.|.+ ++++++ +.++.++
T Consensus 7 l~~g~~~p~f~l~---------~~~g----~~~~l~~~~gk~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv 72 (159)
T 2ls5_A 7 VRIGEMAPDFTIT---------LTDG----KQVTLSSLRGKVVMLQFT-ASWCGVCRKEMPFIEKDIWLKHKDNADFALI 72 (159)
Confidence 5789999999999 8999 999999999999999998 8899999999999998 999998 7789999
Q ss_pred EEecCCH-HHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHH
Q psy2878 80 GGSSDNE-FVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETL 158 (181)
Q Consensus 80 ~Is~d~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll 158 (181)
+|+.|.. +..++|.+++ +++|+++.|++..+++.|++. ....|++||||++|+|++++.+ ....++++++
T Consensus 73 ~v~~d~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~---~~~~P~~~lid~~G~i~~~~~g--~~~~~l~~~l 143 (159)
T 2ls5_A 73 GIDRDEPLEKVLAFAKST----GVTYPLGLDPGADIFAKYALR---DAGITRNVLIDREGKIVKLTRL--YNEEEFASLV 143 (159)
Confidence 9998864 4577777776 889999999999999999963 1136799999999999998842 2223455555
Q ss_pred HHHHhh
Q psy2878 159 RILDAI 164 (181)
Q Consensus 159 ~~l~~l 164 (181)
+.|.+.
T Consensus 144 ~~l~~~ 149 (159)
T 2ls5_A 144 QQINEM 149 (159)
Confidence 555443
No 95
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.92 E-value=3.6e-24 Score=149.43 Aligned_cols=132 Identities=14% Similarity=0.217 Sum_probs=116.1
Q ss_pred cCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q psy2878 4 IGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS 83 (181)
Q Consensus 4 ~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~ 83 (181)
+|..+|+|++. +.+| +.+++++++||+++|+|| ++||+.|..+++.|+++++++. ++.+++|+.
T Consensus 1 ~~~~~p~~~~~---------~~~g----~~~~l~~~~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~ 64 (136)
T 1zzo_A 1 TVPAQLQFSAK---------TLDG----HDFHGESLLGKPAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAG 64 (136)
T ss_dssp CCCGGGCCEEE---------BTTS----CEEEGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEEC
T ss_pred CCCCCCCcccc---------cCCC----CEeeHHHhCCCeEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeC
Confidence 47889999999 8999 999999999999999999 8899999999999999999987 899999998
Q ss_pred CC-HHHHHHHHHHcCCCccc-ceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q psy2878 84 DN-EFVKLAWRRENSNLYKL-NHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRIL 161 (181)
Q Consensus 84 d~-~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l 161 (181)
|. .+..++|.+++ ++ +|+++.|.+..+++.|++. ..|+++|||++|+++ .+.+. ...+++.+.|
T Consensus 65 ~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~i~-----~~P~~~~id~~g~i~-~~~g~----~~~~~l~~~l 130 (136)
T 1zzo_A 65 LDQVPAMQEFVNKY----PVKTFTQLADTDGSVWANFGVT-----QQPAYAFVDPHGNVD-VVRGR----MSQDELTRRV 130 (136)
T ss_dssp SSCHHHHHHHHHHT----TCTTSEEEECTTCHHHHHTTCC-----SSSEEEEECTTCCEE-EEESC----CCHHHHHHHH
T ss_pred CCCHHHHHHHHHHc----CCCceEEEEcCCcHHHHHcCCC-----CCceEEEECCCCCEE-EEecC----CCHHHHHHHH
Confidence 75 78888999887 88 9999999999999999987 678999999999999 66432 3467777777
Q ss_pred Hhhc
Q psy2878 162 DAIQ 165 (181)
Q Consensus 162 ~~l~ 165 (181)
+++.
T Consensus 131 ~~~l 134 (136)
T 1zzo_A 131 TALT 134 (136)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7653
No 96
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.92 E-value=2.8e-24 Score=150.30 Aligned_cols=132 Identities=11% Similarity=0.168 Sum_probs=116.0
Q ss_pred ccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 6 QSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 6 ~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
..+|+|++. |.+| +.+++++++||+++|+|| ++||+.|..+++.|+++++++. ++.+++|+.+.
T Consensus 2 ~~~p~~~l~---------~~~g----~~~~l~~~~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~ 65 (136)
T 1lu4_A 2 DERLQFTAT---------TLSG----APFDGASLQGKPAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRA 65 (136)
T ss_dssp GGGGCCEEE---------BTTS----CEEEGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS
T ss_pred CCCCCeEee---------cCCC----CeecHHHhCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCC
Confidence 468999999 8999 999999999999999999 8899999999999999999997 89999999876
Q ss_pred -HHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 86 -EFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 86 -~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
.+..++|++++ +++|+++.|.+..+++.|++. ..|+++|+|++|+|+ ++.+ .....+.+++.+.|+++
T Consensus 66 ~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~i~-----~~P~~~lid~~G~i~-~~~~-~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 66 DVGAMQSFVSKY----NLNFTNLNDADGVIWARYNVP-----WQPAFVFYRADGTST-FVNN-PTAAMSQDELSGRVAAL 134 (136)
T ss_dssp CHHHHHHHHHHH----TCCSEEEECTTSHHHHHTTCC-----SSSEEEEECTTSCEE-EECC-SSSCCCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHc----CCCceEEECCchhHHHhcCCC-----CCCEEEEECCCCcEE-EEEc-CCCccCHHHHHHHHHHH
Confidence 88899999988 889999999999999999987 678999999999999 6631 11124578888888765
No 97
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.92 E-value=7.7e-25 Score=159.40 Aligned_cols=140 Identities=11% Similarity=0.128 Sum_probs=117.6
Q ss_pred ccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCC-ChhHHHHHHHHHHHHHhc---CcEE
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFV-CPTEISEYNKLVKDFNER---NAIL 78 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~-C~~~~~~l~~l~~~~~~~---~~~v 78 (181)
.+|+.+|+|++. |.+| ++++++++||++||+|| ++||+. |+.+++.|++++++++++ ++++
T Consensus 11 ~~G~~~p~f~l~---------~~~g-----~~~l~~~~gk~vll~f~-~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~v 75 (172)
T 2k6v_A 11 LLNPKPVDFALE---------GPQG-----PVRLSQFQDKVVLLFFG-FTRCPDVCPTTLLALKRAYEKLPPKAQERVQV 75 (172)
T ss_dssp EEEEEECCCEEE---------CSSS-----EEEGGGSTTSEEEEEEE-CTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEE
T ss_pred ccCCCCCCeEEE---------cCCC-----CCcHHHhCCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHhhhhccCCEEE
Confidence 368899999999 7776 68999999999999998 789997 999999999999999876 7999
Q ss_pred EEEecC----CHHHHHHHHHHcCCCcccceeEEEcCC---chHHHHhCCC-CCC--------C-cceeeEEEEcCCCcEE
Q psy2878 79 LGGSSD----NEFVKLAWRRENSNLYKLNHWQFSDTN---GSLIDQLGIR-HET--------G-VALRATFIFDPQNIIQ 141 (181)
Q Consensus 79 i~Is~d----~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~gv~-~~~--------g-~~~p~~~liD~~g~i~ 141 (181)
++||.| +++.+++|++++ +++|++++|++ .++++.||+. ... + .+.|++|||| +|+|+
T Consensus 76 v~is~d~~~d~~~~~~~~~~~~----~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~ 150 (172)
T 2k6v_A 76 IFVSVDPERDPPEVADRYAKAF----HPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLV 150 (172)
T ss_dssp EEEESCTTTCCHHHHHHHHHHH----CTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHh----CCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEE
Confidence 999976 468899999998 89999999987 6899999986 211 1 2468999999 99999
Q ss_pred EEEeccCCCCCCHHHHHHHHHhh
Q psy2878 142 HITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 142 ~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+++.+.. ..+.+++++.|+++
T Consensus 151 ~~~~g~~--~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 151 LLYSPDK--AEATDRVVADLQAL 171 (172)
T ss_dssp EEECHHH--HTCHHHHHHHHHHC
T ss_pred EEECCCC--CCCHHHHHHHHHHh
Confidence 9985332 33678888888765
No 98
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.91 E-value=6.2e-24 Score=154.43 Aligned_cols=118 Identities=19% Similarity=0.281 Sum_probs=104.3
Q ss_pred CccCccCCCcEEecccCCCCCCCC--CcccceeeeecCCC-CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEE--NNVSAFKVITESSF-PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAIL 78 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~--~G~~~~~~~~l~~~-~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~v 78 (181)
+.+|+.+|+|+++ |. +| ++++++++ +||++||+|| ++||++|+.+++.|++++++ ++.+
T Consensus 22 ~~~G~~~P~f~l~---------~~~~~g----~~~~~~~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~v 83 (168)
T 2b1k_A 22 ALIGKPVPKFRLE---------SLDNPG----QFYQADVLTQGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQ----GIRV 83 (168)
T ss_dssp TTTTSBCCCCEEE---------ESSSTT----CEEEGGGGCCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCCE
T ss_pred cccCCcCCCeEee---------cccCCC----cEeehhHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHC----CCEE
Confidence 4689999999999 77 88 99999885 8999999999 88999999999999888765 8999
Q ss_pred EEEecC-CHHHHHHHHHHcCCCccccee-EEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEec
Q psy2878 79 LGGSSD-NEFVKLAWRRENSNLYKLNHW-QFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVN 146 (181)
Q Consensus 79 i~Is~d-~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~ 146 (181)
++|+.+ +.+..++|.+++ +++|+ ++.|.+..+++.|++. ..|++||||++|+|++++.+
T Consensus 84 v~v~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g 144 (168)
T 2b1k_A 84 VGMNYKDDRQKAISWLKEL----GNPYALSLFDGDGMLGLDLGVY-----GAPETFLIDGNGIIRYRHAG 144 (168)
T ss_dssp EEEEESCCHHHHHHHHHHH----CCCCSEEEEETTCHHHHHHTCC-----SSSEEEEECTTSBEEEEEES
T ss_pred EEEECCCChHHHHHHHHHc----CCCCceeeECcchHHHHHcCcc-----ccCEEEEECCCCeEEEEEeC
Confidence 999964 577888899887 88888 5789999999999987 57899999999999998853
No 99
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.90 E-value=9.7e-24 Score=149.70 Aligned_cols=120 Identities=13% Similarity=0.033 Sum_probs=103.5
Q ss_pred cCccCCC-cEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh-cCcEEEEE
Q psy2878 4 IGQSLSS-YRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE-RNAILLGG 81 (181)
Q Consensus 4 ~G~~~P~-f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~-~~~~vi~I 81 (181)
+|+.+|+ |++. |.+| +++++++++||++||+|| ++||++|+.+++.|+++++++++ .++.+++|
T Consensus 3 ~~~~~P~~f~l~---------~~~g----~~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v 68 (144)
T 1i5g_A 3 LKKFFPYSTNVL---------KGAA----ADIALPSLAGKTVFFYFS-ASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLI 68 (144)
T ss_dssp TTTSCSSCSEEE---------ETTE----EEEEGGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred hhhhCCCceEEE---------cCCC----CEecHHHcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCCEEEEEE
Confidence 6889999 9999 8999 999999999999999998 78999999999999999999985 68999999
Q ss_pred ecC-CHHHHHHHHHHcCCCcccceeEEE-cCCchHHHHhCCCCCCCcceeeEEEEc-CCCcEEEEEe
Q psy2878 82 SSD-NEFVKLAWRRENSNLYKLNHWQFS-DTNGSLIDQLGIRHETGVALRATFIFD-PQNIIQHITV 145 (181)
Q Consensus 82 s~d-~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~gv~~~~g~~~p~~~liD-~~g~i~~~~~ 145 (181)
+.| +.+..++|++++ .-..+++.. |.+..+++.|++. ..|+++||| ++|+|++++.
T Consensus 69 ~~d~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 69 SWDESAEDFKDYYAKM---PWLALPFEDRKGMEFLTTGFDVK-----SIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp ECCSSHHHHHHHHTTC---SSEECCTTCHHHHHHHHHHTTCC-----SSSEEEEEETTTCCEEESCH
T ss_pred eCCCCHHHHHHHHHhC---CccccccCchHHHHHHHHHcCCC-----CCCEEEEEECCCCcEEeccc
Confidence 998 467778888765 123555555 5668999999987 678999999 9999998773
No 100
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.90 E-value=1.7e-23 Score=151.19 Aligned_cols=125 Identities=15% Similarity=0.186 Sum_probs=107.5
Q ss_pred CCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC------CHHHHHHHHHHcC
Q psy2878 24 EENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD------NEFVKLAWRRENS 97 (181)
Q Consensus 24 d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d------~~~~~~~~~~~~~ 97 (181)
|.+| +++++++++||++||+|| ++||++|+.+++.|++++++|+..++.+|+|+.| +.+...+|..++
T Consensus 25 ~~~g----~~~~~~~~~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~- 98 (164)
T 2h30_A 25 TADN----RPASVYLKKDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGL- 98 (164)
T ss_dssp ETTS----SBGGGGCCTTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTS-
T ss_pred CCCC----CEeeHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhC-
Confidence 8899 999999999999999999 9999999999999999999999899999999974 345666666654
Q ss_pred CCcccc-eeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 98 NLYKLN-HWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 98 ~~~~~~-~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+++ +++..|.+.++++.|++. ..|++||||++|++++.+.+. ...+++.+.|+++..
T Consensus 99 ---~~~~~~~~~d~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 99 ---NYPKLPVVTDNGGTIAQNLNIS-----VYPSWALIGKDGDVQRIVKGS----INEAQALALIRNPNA 156 (164)
T ss_dssp ---CCTTSCEEECTTCHHHHHTTCC-----SSSEEEEECTTSCEEEEEESC----CCHHHHHHHHHCTTC
T ss_pred ---CCCcceEEEcCchHHHHHcCCC-----ccceEEEECCCCcEEEEEcCC----CCHHHHHHHHHHHHH
Confidence 666 889999999999999987 678999999999999988532 356788888877654
No 101
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.89 E-value=4.6e-23 Score=147.56 Aligned_cols=136 Identities=16% Similarity=0.143 Sum_probs=107.2
Q ss_pred CccCccCCCcEEecccCCCCCCCCCc----ccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENN----VSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G----~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~ 77 (181)
+.+|+.+|+|+++ +.+| ....+.+++++++||++||+|| ++||+.|..+++.|++++++ .++.
T Consensus 8 ~~~g~~~p~f~l~---------~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~-~~~C~~C~~~~~~l~~l~~~---~~v~ 74 (156)
T 1kng_A 8 ALIGRPAPQTALP---------PLEGLQADNVQVPGLDPAAFKGKVSLVNVW-ASWCVPCHDEAPLLTELGKD---KRFQ 74 (156)
T ss_dssp ----CBCCCCCBC---------CCTTCEETTEECCCBCGGGGTTSCEEEEEE-CTTCHHHHHHHHHHHHHTTC---TTSE
T ss_pred HHhCCCCCCceee---------eccCcccccccCceechHHhCCCEEEEEEE-cccCHhHHHHHHHHHHHHhc---CCeE
Confidence 5689999999999 4443 0011689999999999999998 78999999999999998876 4699
Q ss_pred EEEEecC-CHHHHHHHHHHcCCCccccee-EEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHH
Q psy2878 78 LLGGSSD-NEFVKLAWRRENSNLYKLNHW-QFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPI 155 (181)
Q Consensus 78 vi~Is~d-~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~ 155 (181)
+++|+.+ +.+..++|++++ +++|+ +..|.+..+++.|++. ..|++||||++|++++.+.+. ...+
T Consensus 75 ~v~v~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~v~-----~~P~~~~id~~G~i~~~~~g~----~~~~ 141 (156)
T 1kng_A 75 LVGINYKDAADNARRFLGRY----GNPFGRVGVDANGRASIEWGVY-----GVPETFVVGREGTIVYKLVGP----ITPD 141 (156)
T ss_dssp EEEEEESCCHHHHHHHHHHH----CCCCSEEEEETTSHHHHHTTCC-----SSCEEEEECTTSBEEEEEESC----CCHH
T ss_pred EEEEECCCCHHHHHHHHHHc----CCCCceeeeCchhHHHHhcCcC-----ccCeEEEEcCCCCEEEEEeCC----CCHH
Confidence 9999975 577888999987 88999 8889999999999987 678999999999999988532 2334
Q ss_pred HHHHHHHh
Q psy2878 156 ETLRILDA 163 (181)
Q Consensus 156 ~ll~~l~~ 163 (181)
++.+.|++
T Consensus 142 ~l~~~l~~ 149 (156)
T 1kng_A 142 NLRSVLLP 149 (156)
T ss_dssp HHHHTHHH
T ss_pred HHHHHHHH
Confidence 55544443
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.88 E-value=1.1e-22 Score=144.69 Aligned_cols=121 Identities=13% Similarity=0.108 Sum_probs=101.1
Q ss_pred CCccCccCCC-cEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh-cCcEE
Q psy2878 1 MKTIGQSLSS-YRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE-RNAIL 78 (181)
Q Consensus 1 ~l~~G~~~P~-f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~-~~~~v 78 (181)
|...|+.+|+ |++. |.+| .+++++++||++||+|| ++||++|+.+++.|+++++++++ .++.+
T Consensus 1 m~~~~~~~P~~f~l~---------~~~g-----~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~v 65 (146)
T 1o8x_A 1 MSGLDKYLPGIEKLR---------RGDG-----EVEVKSLAGKLVFFYFS-ASWCPPARGFTPQLIEFYDKFHESKNFEV 65 (146)
T ss_dssp --CGGGTSTTCCEEE---------ETTE-----EEEGGGGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEE
T ss_pred CcchHhhCCCceEEE---------cCCC-----CCcHHHhCCCEEEEEEE-ccCCHHHHHHHHHHHHHHHHhhhcCCeEE
Confidence 5568999999 9999 7775 68999999999999998 78999999999999999999984 68999
Q ss_pred EEEecCC-HHHHHHHHHHcCCCcccceeEEE-cCCchHHHHhCCCCCCCcceeeEEEEc-CCCcEEEEE
Q psy2878 79 LGGSSDN-EFVKLAWRRENSNLYKLNHWQFS-DTNGSLIDQLGIRHETGVALRATFIFD-PQNIIQHIT 144 (181)
Q Consensus 79 i~Is~d~-~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~gv~~~~g~~~p~~~liD-~~g~i~~~~ 144 (181)
++|+.|. .+..++|++++ .-..+++.. |.+.++++.|++. ..|+++||| ++|+|++++
T Consensus 66 v~v~~d~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~v~-----~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 66 VFCTWDEEEDGFAGYFAKM---PWLAVPFAQSEAVQKLSKHFNVE-----SIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp EEEECCCSHHHHHHHHTTC---SSEECCGGGHHHHHHHHHHTTCC-----SSSEEEEEETTTCCEEESC
T ss_pred EEEeCCCCHHHHHHHHHHC---CceeeccchhhHHHHHHHHhCCC-----CCCEEEEEECCCCeEEEec
Confidence 9999984 66777777765 223455554 6678999999987 578999999 999999877
No 103
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.87 E-value=2.7e-23 Score=151.45 Aligned_cols=122 Identities=13% Similarity=0.133 Sum_probs=100.5
Q ss_pred CCccCccCCCc-EEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh-cCcEE
Q psy2878 1 MKTIGQSLSSY-RVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE-RNAIL 78 (181)
Q Consensus 1 ~l~~G~~~P~f-~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~-~~~~v 78 (181)
|..+|+.+|+| ++. |.+| +++|++++||++||+|| ++||++|+.+++.|++++++|++ .++.|
T Consensus 21 ~~~vG~~~P~f~~l~---------~~~g-----~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~v 85 (165)
T 3s9f_A 21 MSGVAKHLGEALKLR---------KQAD-----TADMDSLSGKTVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEI 85 (165)
T ss_dssp -CHHHHHHHHTSCEE---------ETTE-----EECSGGGTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEE
T ss_pred hhhhcccCCcceeee---------cCCC-----cccHHHcCCCEEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEE
Confidence 45689999999 898 6775 78999999999999999 89999999999999999999987 68999
Q ss_pred EEEecCC-HHHHHHHHHHcCCCcccceeEEEcCC-chHHHHhCCCCCCCcceeeEEEEcCC-CcEEEEEe
Q psy2878 79 LGGSSDN-EFVKLAWRRENSNLYKLNHWQFSDTN-GSLIDQLGIRHETGVALRATFIFDPQ-NIIQHITV 145 (181)
Q Consensus 79 i~Is~d~-~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~gv~~~~g~~~p~~~liD~~-g~i~~~~~ 145 (181)
++|+.|. .+..++|.+++ .-..+++..+.. .++++.|++. ..|++||||++ |+|+++..
T Consensus 86 v~v~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~v~-----~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 86 ILASWDEEEDDFNAYYAKM---PWLSIPFANRNIVEALTKKYSVE-----SIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp EEEECCCSHHHHHHHHTTC---SSEECCTTCHHHHHHHHHHTTCC-----SSSEEEEEETTTCCEEESCH
T ss_pred EEEecCCCHHHHHHHHHhC---CCcccccCchhHHHHHHHHcCCC-----CCCEEEEEeCCCCEEEeccc
Confidence 9999886 46667777754 123444444333 7999999987 67899999998 99998873
No 104
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.87 E-value=1.4e-22 Score=143.38 Aligned_cols=121 Identities=14% Similarity=0.113 Sum_probs=100.8
Q ss_pred CCccCccCCCc-EEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHH-hcCcEE
Q psy2878 1 MKTIGQSLSSY-RVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFN-ERNAIL 78 (181)
Q Consensus 1 ~l~~G~~~P~f-~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~-~~~~~v 78 (181)
|..+|+.+|+| ++. |.+| .+++++++||++||+|| ++||+.|+.+++.|++++++++ +.++.+
T Consensus 1 m~~~g~~~p~~~~l~---------~~~g-----~~~l~~~~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~v 65 (144)
T 1o73_A 1 MSGLAKYLPGATNLL---------SKSG-----EVSLGSLVGKTVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEV 65 (144)
T ss_dssp CCGGGGTSCTTCCBB---------CTTS-----CBCSGGGTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEE
T ss_pred CcchhhhCccceEee---------cCCC-----cCcHHHhCCCEEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEE
Confidence 67789999997 998 7776 68999999999999998 8899999999999999999998 468999
Q ss_pred EEEecCC-HHHHHHHHHHcCCCcccceeEEE-cCCchHHHHhCCCCCCCcceeeEEEEc-CCCcEEEEE
Q psy2878 79 LGGSSDN-EFVKLAWRRENSNLYKLNHWQFS-DTNGSLIDQLGIRHETGVALRATFIFD-PQNIIQHIT 144 (181)
Q Consensus 79 i~Is~d~-~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~gv~~~~g~~~p~~~liD-~~g~i~~~~ 144 (181)
++|+.|. .+..++|.+++ ....+++.. |.+..+++.|++. ..|+++||| ++|+|++++
T Consensus 66 v~i~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~-----~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 66 VLISWDENESDFHDYYGKM---PWLALPFDQRSTVSELGKTFGVE-----SIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp EEEECCSSHHHHHHHHTTC---SSEECCTTCHHHHHHHHHHHTCC-----SSSEEEEEETTTCCEEESC
T ss_pred EEEeCCCCHHHHHHHHHhC---CceEeeccchhHHHHHHHHcCCC-----CCCEEEEEECCCCeEEecc
Confidence 9999985 55667777664 123444443 5567899999987 678999999 899999876
No 105
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.77 E-value=2.3e-23 Score=147.11 Aligned_cols=117 Identities=14% Similarity=0.171 Sum_probs=99.2
Q ss_pred ccCCCcEEecccCCCCCCCCCcccceeeeecCC-CCCC-eEEEEEeeCCCCCCChhHHHHHHHHHHHHHh--cCcEEEEE
Q psy2878 6 QSLSSYRVIGVKPGFNLPEENNVSAFKVITESS-FPGK-WKIFYFYPKDFTFVCPTEISEYNKLVKDFNE--RNAILLGG 81 (181)
Q Consensus 6 ~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~-~~gk-~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~--~~~~vi~I 81 (181)
+.+|+|++. |.+| +++++++ ++|| ++||+|| ++||++|+.+++.|+++++++++ .++.+++|
T Consensus 2 ~~~p~~~l~---------~~~g----~~~~l~~~~~gk~~vll~F~-a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v 67 (143)
T 2lus_A 2 EFIQGIKLV---------KKNR----CEVNANEALKDKDIIGFYFS-AHWCPPCRGFTPILADMYSELVDDSAPFEIIFV 67 (143)
Confidence 457889888 8999 9999999 9999 9999998 78999999999999999999954 58999999
Q ss_pred ecCC-HHHHHHHHHHcCCCcccceeE---EEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEe
Q psy2878 82 SSDN-EFVKLAWRRENSNLYKLNHWQ---FSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITV 145 (181)
Q Consensus 82 s~d~-~~~~~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~ 145 (181)
+.|. .+..++|++++ +++|+. ..|.+.++++.|++. ..|+++|||++|+|++++.
T Consensus 68 ~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~-----~~P~~~lid~~G~i~~~~~ 126 (143)
T 2lus_A 68 SSDRSEDDMFQYMMES----HGDWLAIPYRSGPASNVTAKYGIT-----GIPALVIVKKDGTLISMNG 126 (143)
Confidence 9884 56777777776 666554 456667899999986 6789999999999999873
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.71 E-value=1.7e-16 Score=117.59 Aligned_cols=156 Identities=14% Similarity=0.199 Sum_probs=114.5
Q ss_pred CccCccCCC--cEEecccCCCCCCCCC--cccceeeeecCCC--CCCeEEEEEeeCCCCCCChh-HHHHHHHHHHHH-Hh
Q psy2878 2 KTIGQSLSS--YRVIGVKPGFNLPEEN--NVSAFKVITESSF--PGKWKIFYFYPKDFTFVCPT-EISEYNKLVKDF-NE 73 (181)
Q Consensus 2 l~~G~~~P~--f~l~~~~~~~~~~d~~--G~~~~~~~~l~~~--~gk~~ll~F~~~~~cp~C~~-~~~~l~~l~~~~-~~ 73 (181)
..+|+++|. +++.=+. |...+.+ .-...+++++++. +||.+||+++++.++|.|.. ++|.+.+.++++ ++
T Consensus 26 ~~v~~~~P~gdv~f~yip--~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~ 103 (199)
T 4h86_A 26 DLVNKKFPAGDYKFQYIA--ISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKE 103 (199)
T ss_dssp TTTTSBCCCTTCEEEECC--CCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCceEEEec--CCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHh
Confidence 458899994 4443110 0000111 1113377888875 68999999999999999976 699999999876 67
Q ss_pred cCc-EEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC-CC-CC--cceeeEEEEcCCCcEEEEEeccC
Q psy2878 74 RNA-ILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR-HE-TG--VALRATFIFDPQNIIQHITVNNL 148 (181)
Q Consensus 74 ~~~-~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~-~~-~g--~~~p~~~liD~~g~i~~~~~~~~ 148 (181)
+|+ +|++||+|++..+.+|.+.........+++++|+++++++.+|+. .. .+ .++|..+||| ||+|.+.++.+.
T Consensus 104 kGvd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DGvV~~~~vE~~ 182 (199)
T 4h86_A 104 KEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NGIVTYAAKETN 182 (199)
T ss_dssp SCCCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TTEEEEEEECSS
T ss_pred cCCcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CCEEEEEEEeCC
Confidence 887 799999999999999999874444567999999999999999987 22 22 3678899999 999999997433
Q ss_pred CC----CCCHHHHHHH
Q psy2878 149 NV----GRNPIETLRI 160 (181)
Q Consensus 149 ~~----~~~~~~ll~~ 160 (181)
+. -..++.+|+.
T Consensus 183 pg~~~~vS~ae~vL~~ 198 (199)
T 4h86_A 183 PGTDVTVSSVESVLAH 198 (199)
T ss_dssp TTTCCSTTSHHHHHTT
T ss_pred CCCCCcccCHHHHHhc
Confidence 21 1346666643
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.64 E-value=1e-15 Score=105.86 Aligned_cols=106 Identities=14% Similarity=0.054 Sum_probs=83.7
Q ss_pred CCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccc
Q psy2878 24 EENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLN 103 (181)
Q Consensus 24 d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~ 103 (181)
+.+| ........+||+++|+|| +.||+.|..+.+.+.++.+++. .++.++.|+.+
T Consensus 13 ~~~~----~~~~~~~~~~k~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~------------------- 67 (126)
T 2l57_A 13 SINV----VENLEEAKEGIPTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE------------------- 67 (126)
T ss_dssp CCSE----ESSTTTCCSSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT-------------------
T ss_pred ccch----hHHHHHHhCCCcEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC-------------------
Confidence 6666 555566667899999998 8899999999999999999887 57999999955
Q ss_pred eeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhccC
Q psy2878 104 HWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTG 167 (181)
Q Consensus 104 ~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~ 167 (181)
.|.+.++++.|++. ..|+++++|++|++++.+.+. ...+++.+.|+++...
T Consensus 68 ----~d~~~~~~~~~~v~-----~~Pt~~~~~~~G~~~~~~~G~----~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 68 ----EEKNIDLAYKYDAN-----IVPTTVFLDKEGNKFYVHQGL----MRKNNIETILNSLGVK 118 (126)
T ss_dssp ----SSHHHHHHHHTTCC-----SSSEEEEECTTCCEEEEEESC----CCHHHHHHHHHHHCCC
T ss_pred ----CCchHHHHHHcCCc-----ceeEEEEECCCCCEEEEecCC----CCHHHHHHHHHHHhcc
Confidence 12234677888886 578999999999999887532 4567888888877643
No 108
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.61 E-value=1.2e-16 Score=112.03 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=86.0
Q ss_pred ccCccCCCcE-EecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEE
Q psy2878 3 TIGQSLSSYR-VIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAIL 78 (181)
Q Consensus 3 ~~G~~~P~f~-l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~v 78 (181)
..|..+|+|. +. +.++ ....+++++||++||+|| ++||++|+.+.+.+ .++.+++. ++.+
T Consensus 5 ~~~~~~~~f~~~~---------~~~~----~~~~l~~~~~k~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~ 68 (134)
T 2fwh_A 5 AQTQTHLNFTQIK---------TVDE----LNQALVEAKGKPVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVL 68 (134)
T ss_dssp -----CCCCEECC---------SHHH----HHHHHHHHTTSCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEE
T ss_pred cccccCCCcEEec---------CHHH----HHHHHHHhcCCcEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEE
Confidence 4677888887 44 5555 567777778999999999 89999999988888 88888775 5999
Q ss_pred EEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEE--EEEeccCCCCCCHHH
Q psy2878 79 LGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQ--HITVNNLNVGRNPIE 156 (181)
Q Consensus 79 i~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~--~~~~~~~~~~~~~~~ 156 (181)
+.|+.+... |.+.++++.|++. ..|+++++|++|+++ +++.+ ....++
T Consensus 69 ~~vd~~~~~---------------------~~~~~l~~~~~v~-----~~Pt~~~~d~~G~~v~~~~~~G----~~~~~~ 118 (134)
T 2fwh_A 69 LQANVTAND---------------------AQDVALLKHLNVL-----GLPTILFFDGQGQEHPQARVTG----FMDAET 118 (134)
T ss_dssp EEEECTTCC---------------------HHHHHHHHHTTCC-----SSSEEEEECTTSCBCGGGCBCS----CCCHHH
T ss_pred EEEeCCCCc---------------------chHHHHHHHcCCC-----CCCEEEEECCCCCEeeeeeeee----ccCHHH
Confidence 999887521 2245678888886 578999999999998 45532 135678
Q ss_pred HHHHHHhhcc
Q psy2878 157 TLRILDAIQT 166 (181)
Q Consensus 157 ll~~l~~l~~ 166 (181)
+.+.|++++.
T Consensus 119 l~~~l~~~~~ 128 (134)
T 2fwh_A 119 FSAHLRDRQP 128 (134)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHhcCc
Confidence 8888887764
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.57 E-value=1.2e-15 Score=109.50 Aligned_cols=111 Identities=8% Similarity=-0.008 Sum_probs=84.9
Q ss_pred eeeecCCCCCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEE
Q psy2878 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFS 108 (181)
Q Consensus 32 ~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~ 108 (181)
+.+++++.+||+++|+||.++||++|+.+++.| .++.+.+. .++.++.|+.+... +++++ +.
T Consensus 38 ~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~~-------------~~~~~-~~ 102 (154)
T 2ju5_A 38 EALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQKN-------------HQPEE-QR 102 (154)
T ss_dssp HHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSSC-------------CCCHH-HH
T ss_pred HHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCcccc-------------CCChh-hH
Confidence 677778888999999998788999999999999 66655443 46888888876532 12333 24
Q ss_pred cCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 109 DTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 109 D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
|.+.++++.|++. ..|+++|+|++|++++.. +.. ....+++++.|+++.
T Consensus 103 ~~~~~l~~~~~v~-----~~Pt~~~~d~~G~~~~~~-G~~--~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 103 QKNQELKAQYKVT-----GFPELVFIDAEGKQLARM-GFE--PGGGAAYVSKVKSAL 151 (154)
T ss_dssp HHHHHHHHHTTCC-----SSSEEEEECTTCCEEEEE-CCC--TTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHcCCC-----CCCEEEEEcCCCCEEEEe-cCC--CCCHHHHHHHHHHHH
Confidence 5567899999987 578999999999999987 432 346788888887664
No 110
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.51 E-value=2.3e-13 Score=95.55 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=80.9
Q ss_pred CCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccc
Q psy2878 24 EENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLN 103 (181)
Q Consensus 24 d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~ 103 (181)
+.+| ...++++++||++||+|| +.||++|....+.+.++.+++.. ++.++.|..|.
T Consensus 38 ~~~~----~~~~l~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~------------------ 93 (141)
T 3hxs_A 38 DYEN----HSKEWKYLGDKPAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDK------------------ 93 (141)
T ss_dssp CCSS----CCCCCCCCCSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTT------------------
T ss_pred cccc----chhHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCC------------------
Confidence 5667 788888889999999999 88999999999999999998875 48888888654
Q ss_pred eeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 104 HWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 104 ~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+.++++.|++. ..|+++++|++|+++ .+.+. ...+++.+.|+++.
T Consensus 94 -------~~~~~~~~~v~-----~~Pt~~~~~~~g~~~-~~~G~----~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 94 -------EPELARDFGIQ-----SIPTIWFVPMKGEPQ-VNMGA----LSKEQLKGYIDKVL 138 (141)
T ss_dssp -------CHHHHHHTTCC-----SSSEEEEECSSSCCE-EEESC----CCHHHHHHHHHHTT
T ss_pred -------CHHHHHHcCCC-----CcCEEEEEeCCCCEE-EEeCC----CCHHHHHHHHHHHH
Confidence 34577888887 678999999999987 44222 35677888777654
No 111
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.45 E-value=5.2e-13 Score=92.89 Aligned_cols=103 Identities=12% Similarity=0.064 Sum_probs=77.8
Q ss_pred eecCCCCCCeEEEEEeeCCCCCCChhHHHHHH--HHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCC
Q psy2878 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYN--KLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTN 111 (181)
Q Consensus 34 ~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~--~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~ 111 (181)
+..+...||+++|+|| ++||++|+.+.+.|. ++.+++.+ ++.++.|+.+. .|.+
T Consensus 22 ~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~----------------------~~~~ 77 (133)
T 3fk8_A 22 LAAGKRTHKPTLLVFG-ANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN----------------------FDRN 77 (133)
T ss_dssp HHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT----------------------TTSS
T ss_pred HHHHHhcCCcEEEEEc-CCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc----------------------ccch
Confidence 3333346899999998 999999999999999 99988875 59999998864 2345
Q ss_pred chHHHHhCC---CCCCCcceeeEEEEcCCCcEEEEEeccCCC---CCCHHHHHHHHHhhc
Q psy2878 112 GSLIDQLGI---RHETGVALRATFIFDPQNIIQHITVNNLNV---GRNPIETLRILDAIQ 165 (181)
Q Consensus 112 ~~~~~~~gv---~~~~g~~~p~~~liD~~g~i~~~~~~~~~~---~~~~~~ll~~l~~l~ 165 (181)
.++++.|++ . ..|+++++|++|++++.+.++... ....+++.+.|+++.
T Consensus 78 ~~l~~~~~v~~~~-----~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 78 LELSQAYGDPIQD-----GIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp HHHHHHTTCGGGG-----CSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCccCC-----ccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 677888887 5 568999999999999998542111 235667777776653
No 112
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.44 E-value=6.6e-13 Score=91.98 Aligned_cols=95 Identities=16% Similarity=0.331 Sum_probs=76.2
Q ss_pred eeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCC
Q psy2878 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTN 111 (181)
Q Consensus 32 ~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~ 111 (181)
+.++....+||+++|.|| ++||++|+.+.+.+.++.+++++ ++.++.|+.|. +
T Consensus 33 ~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~-------------------------~ 85 (128)
T 3ul3_B 33 NIINGVNMKNTVIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDK-------------------------N 85 (128)
T ss_dssp SSSSBTTSCCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGG-------------------------C
T ss_pred cHHHHHHccCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC-------------------------C
Confidence 567777788999999998 88999999999999999999974 58888888543 2
Q ss_pred chHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHh
Q psy2878 112 GSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDA 163 (181)
Q Consensus 112 ~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~ 163 (181)
.++++.|++. ..|+++++ ++|+++.++.+. ...+++.+.|++
T Consensus 86 ~~l~~~~~v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~ 127 (128)
T 3ul3_B 86 ESLARKFSVK-----SLPTIILL-KNKTMLARKDHF----VSSNDLIALIKK 127 (128)
T ss_dssp HHHHHHTTCC-----SSSEEEEE-ETTEEEEEESSC----CCHHHHHHHHTT
T ss_pred HHHHHHcCCC-----CcCEEEEE-ECCEEEEEecCC----CCHHHHHHHHHh
Confidence 3678889987 56799999 699999887432 456777777754
No 113
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.43 E-value=1.4e-15 Score=110.70 Aligned_cols=122 Identities=12% Similarity=-0.027 Sum_probs=73.5
Q ss_pred eeecCCCCCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEc
Q psy2878 33 VITESSFPGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSD 109 (181)
Q Consensus 33 ~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D 109 (181)
.+.++..+||+++|+|| ++||++|+.+.+.+ .++.+.+++ ++.++.|+.|....+..............+..+.|
T Consensus 39 ~~~~a~~~gk~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (172)
T 3f9u_A 39 GMEYARQHNKPVMLDFT-GYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGD 116 (172)
T ss_dssp HHHHHHHTTCCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHH
T ss_pred HHHHHHHcCCeEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchhhhhhhhhh
Confidence 45555567999999999 88999999864443 555555554 69999999876331100000000000111222222
Q ss_pred CCchH-HHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 110 TNGSL-IDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 110 ~~~~~-~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
....+ ++.|++. ..|+++|+|++|+++..+.+. ..+.+++++.|+++
T Consensus 117 ~~~~~~~~~~~v~-----~~Pt~~lid~~G~~~~~~~G~---~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 117 KWSYLQRVKFGAN-----AQPFYVLIDNEGNPLNKSYAY---DEDISKYINFLQTG 164 (172)
T ss_dssp HHHHHHHHHHSCC-----CSSEEEEECTTSCBSSCCBCS---CCCHHHHHHHHHHH
T ss_pred hhhHHHHHHcCCC-----CcceEEEECCCCCEEeeccCC---CCCHHHHHHHHHHH
Confidence 22223 5889987 568999999999999888422 22356666655543
No 114
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=5.5e-13 Score=92.25 Aligned_cols=103 Identities=12% Similarity=0.139 Sum_probs=76.7
Q ss_pred eeeecCCCCCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEE
Q psy2878 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFS 108 (181)
Q Consensus 32 ~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~ 108 (181)
+.+.+++.+||+++|.|| +.||+.|..+.+.+ .++.+.+. .++.++.|..+.
T Consensus 18 ~~~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~~vd~~~----------------------- 72 (130)
T 2kuc_A 18 EALKRAEVEDKLLFVDCF-TTWCGPCKRLSKVVFKDSLVADYFN-RHFVNLKMDMEK----------------------- 72 (130)
T ss_dssp HHHHHHHHHSSCEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHHH-HHSEEEEECSSS-----------------------
T ss_pred HHHHHHHhcCCeEEEEEE-CCCCccHHHHHHHhcCcHHHHHHHh-cCeEEEEEecCC-----------------------
Confidence 445666667899999998 88999999999988 55555444 357777777664
Q ss_pred cCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhccCC
Q psy2878 109 DTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTGK 168 (181)
Q Consensus 109 D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~~ 168 (181)
|.+..+++.|++. ..|+++++|++|++++.+.+. ...+++.+.|+++..+.
T Consensus 73 ~~~~~~~~~~~v~-----~~Pt~~~~d~~G~~~~~~~G~----~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 73 GEGVELRKKYGVH-----AYPTLLFINSSGEVVYRLVGA----EDAPELLKKVKLGVESE 123 (130)
T ss_dssp TTHHHHHHHTTCC-----SSCEEEEECTTSCEEEEEESC----CCHHHHHHHHHHHHSCC
T ss_pred cchHHHHHHcCCC-----CCCEEEEECCCCcEEEEecCC----CCHHHHHHHHHHHHHhc
Confidence 2345778888886 578999999999999887532 35678888888776543
No 115
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.38 E-value=8.1e-12 Score=84.38 Aligned_cols=90 Identities=7% Similarity=0.093 Sum_probs=73.4
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
++|+++|+|| +.||+.|....+.+.++.+++++ ++.++.|+.|. +.++++.|+
T Consensus 16 ~~~~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~ 68 (112)
T 2voc_A 16 SEGVVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE-------------------------NQETAGKYG 68 (112)
T ss_dssp SSSEEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT-------------------------CCSHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC-------------------------CHHHHHHcC
Confidence 6788999998 88999999999999999999875 69999998764 346888899
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.++++..
T Consensus 69 v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 69 VM-----SIPTLLVL-KDGEVVETSVGF----KPKEALQELVNKHLL 105 (112)
T ss_dssp CC-----SBSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHTTSC
T ss_pred CC-----cccEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHHHH
Confidence 87 67899999 899999888532 356778888876654
No 116
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.37 E-value=4e-12 Score=85.55 Aligned_cols=89 Identities=18% Similarity=0.252 Sum_probs=70.0
Q ss_pred CCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 38 SFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 38 ~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
+.+||+++|+|| ++||++|....+.|.++.+++. ++.++.|..+. .+.++++.
T Consensus 21 ~~~~~~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~------------------------~~~~~~~~ 73 (111)
T 2pu9_C 21 AAGDKPVVLDMF-TQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ------------------------ENKTLAKE 73 (111)
T ss_dssp TCTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS------------------------TTHHHHHH
T ss_pred hcCCCEEEEEEE-CCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc------------------------chHHHHHH
Confidence 346889999998 8899999999999999998876 58899888873 14577888
Q ss_pred hCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 118 LGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
|++. ..|+ ++++++|+++..+.+. ..+++.+.|+++
T Consensus 74 ~~v~-----~~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~l~~~ 109 (111)
T 2pu9_C 74 LGIR-----VVPT-FKILKENSVVGEVTGA-----KYDKLLEAIQAA 109 (111)
T ss_dssp HCCS-----BSSE-EEEESSSSEEEEEESS-----CHHHHHHHHHHH
T ss_pred cCCC-----eeeE-EEEEeCCcEEEEEcCC-----CHHHHHHHHHHh
Confidence 9987 5677 7778999999887422 267777777665
No 117
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.33 E-value=5.9e-12 Score=89.20 Aligned_cols=97 Identities=7% Similarity=0.086 Sum_probs=73.3
Q ss_pred eeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCC
Q psy2878 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTN 111 (181)
Q Consensus 32 ~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~ 111 (181)
+.+......+|+++|.|| +.||+.|....+.+.++.+++.. ++.++.|+.+. +
T Consensus 46 ~~~~~~~~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~-------------------------~ 98 (148)
T 3p2a_A 46 ETLDKLLQDDLPMVIDFW-APWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEA-------------------------E 98 (148)
T ss_dssp TTHHHHTTCSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT-------------------------C
T ss_pred HHHHHHHhcCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcC-------------------------C
Confidence 444333346789999998 88999999999999999998865 48888888763 3
Q ss_pred chHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 112 GSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 112 ~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
.++++.|++. ..|+++++ ++|+++..+.+. ...+++.+.|+++.
T Consensus 99 ~~l~~~~~v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 99 PALSTRFRIR-----SIPTIMLY-RNGKMIDMLNGA----VPKAPFDNWLDEQL 142 (148)
T ss_dssp HHHHHHTTCC-----SSSEEEEE-ETTEEEEEESSC----CCHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-----ccCEEEEE-ECCeEEEEEeCC----CCHHHHHHHHHHHh
Confidence 4677888887 56788887 599999877432 45677777776654
No 118
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.30 E-value=1e-11 Score=83.52 Aligned_cols=89 Identities=11% Similarity=0.163 Sum_probs=68.6
Q ss_pred CCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 37 SSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 37 ~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
++..+|++||.|| ++||++|....|.+.++.+++. ++.++.|..|. +.++++
T Consensus 16 ~~~~~k~vvv~F~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~-------------------------~~~l~~ 67 (105)
T 3zzx_A 16 NEAGNKLVVIDFY-ATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDE-------------------------CEDIAQ 67 (105)
T ss_dssp HHTTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTT-------------------------CHHHHH
T ss_pred HhcCCCEEEEEEE-CCCCCCccCCCcchhhhhhccC--CeEEEEEeccc-------------------------CHHHHH
Confidence 3445789999998 8999999999999999887775 56677666542 356788
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
.|++. ..|+.+++ ++|+++.++.+ .+.+++.+.|++.
T Consensus 68 ~~~V~-----~~PT~~~~-~~G~~v~~~~G-----~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 68 DNQIA-----CMPTFLFM-KNGQKLDSLSG-----ANYDKLLELVEKN 104 (105)
T ss_dssp HTTCC-----BSSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHHH
T ss_pred HcCCC-----eecEEEEE-ECCEEEEEEeC-----cCHHHHHHHHHhc
Confidence 89987 56776666 79999998853 3568888888764
No 119
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.30 E-value=4.7e-12 Score=86.27 Aligned_cols=87 Identities=9% Similarity=0.090 Sum_probs=69.2
Q ss_pred CCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 39 ~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
.++|+++|.|| +.||++|+...+.|.++.+++.+ +.++.|..|. +.++++.|
T Consensus 29 ~~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~-------------------------~~~l~~~~ 80 (116)
T 3qfa_C 29 AGDKLVVVDFS-ATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD-------------------------CQDVASEC 80 (116)
T ss_dssp HTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT-------------------------THHHHHHT
T ss_pred cCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------------------------CHHHHHHc
Confidence 36899999998 88999999999999999888864 8888888753 34677888
Q ss_pred CCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
++. ..|+++++ ++|+++..+.+ ...+++.+.|+++
T Consensus 81 ~v~-----~~Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 115 (116)
T 3qfa_C 81 EVK-----SMPTFQFF-KKGQKVGEFSG-----ANKEKLEATINEL 115 (116)
T ss_dssp TCC-----SSSEEEEE-SSSSEEEEEES-----CCHHHHHHHHHHH
T ss_pred CCc-----cccEEEEE-eCCeEEEEEcC-----CCHHHHHHHHHHh
Confidence 887 56787777 79999988742 1567777777654
No 120
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.28 E-value=1.1e-11 Score=86.64 Aligned_cols=89 Identities=15% Similarity=0.272 Sum_probs=69.9
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|+|| +.||+.|....+.|.++.+++.+ ++.++.|..+. +.++++.|+
T Consensus 37 ~~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~ 89 (136)
T 2l5l_A 37 GDKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEK-------------------------EQELAGAFG 89 (136)
T ss_dssp CSSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT-------------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCC-------------------------CHHHHHHcC
Confidence 3588999988 88999999999999999988875 48888888753 246777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+. ..|+++++|++|+++ .+.+ ....+++.+.|+++.
T Consensus 90 v~-----~~Pt~~~~~~~G~~~-~~~G----~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 90 IR-----SIPSILFIPMEGKPE-MAQG----AMPKASFKKAIDEFL 125 (136)
T ss_dssp CC-----SSCEEEEECSSSCCE-EEES----CCCHHHHHHHHHHHH
T ss_pred CC-----CCCEEEEECCCCcEE-EEeC----CCCHHHHHHHHHHHh
Confidence 86 578999999999998 4422 235677777777664
No 121
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.28 E-value=4.7e-11 Score=80.31 Aligned_cols=89 Identities=15% Similarity=0.155 Sum_probs=70.7
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+++++|+|| +.||+.|....+.+.++.++++++ +.++.|+.+. +.++++.|+
T Consensus 24 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------------------------~~~~~~~~~ 76 (115)
T 1thx_A 24 AEQPVLVYFW-ASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP-------------------------NPTTVKKYK 76 (115)
T ss_dssp CSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT-------------------------CHHHHHHTT
T ss_pred CCceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC-------------------------CHHHHHHcC
Confidence 5788989988 889999999999999999888754 8999998764 235778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++.
T Consensus 77 v~-----~~Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~l 112 (115)
T 1thx_A 77 VE-----GVPALRLV-KGEQILDSTEGV----ISKDKLLSFLDTHL 112 (115)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred CC-----ceeEEEEE-cCCEEEEEecCC----CCHHHHHHHHHHHh
Confidence 86 57899999 899999887432 34677777777653
No 122
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.28 E-value=1.8e-11 Score=83.93 Aligned_cols=89 Identities=19% Similarity=0.296 Sum_probs=69.4
Q ss_pred CCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 39 ~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
.+||+++|.|| ++||++|+...|.+.++.+++. ++.++.|..+. .+.++++.|
T Consensus 35 ~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~------------------------~~~~~~~~~ 87 (124)
T 1faa_A 35 AGDKPVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ------------------------ENKTLAKEL 87 (124)
T ss_dssp TTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS------------------------TTHHHHHHH
T ss_pred cCCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc------------------------chHHHHHHc
Confidence 36789999998 8999999999999999988876 58888888763 135677889
Q ss_pred CCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
++. ..|+ ++++++|+++..+.+. ..+++.+.|+++.
T Consensus 88 ~v~-----~~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~i~~~~ 123 (124)
T 1faa_A 88 GIR-----VVPT-FKILKENSVVGEVTGA-----KYDKLLEAIQAAR 123 (124)
T ss_dssp CCS-----SSSE-EEEEETTEEEEEEESS-----CHHHHHHHHHHHT
T ss_pred CCC-----eeeE-EEEEeCCcEEEEEcCC-----CHHHHHHHHHHhh
Confidence 987 5567 6666899999887422 2677888777653
No 123
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.28 E-value=3.9e-11 Score=79.67 Aligned_cols=88 Identities=9% Similarity=0.140 Sum_probs=70.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+++++|+|| +.||+.|....+.+.++.+++.. ++.++.|+.+. +.++++.|+
T Consensus 19 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------------------------~~~~~~~~~ 71 (107)
T 2i4a_A 19 ASGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD-------------------------NPETPNAYQ 71 (107)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT-------------------------CCHHHHHTT
T ss_pred CCCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC-------------------------CHHHHHhcC
Confidence 5688989888 88999999999999999999875 68888888663 246778898
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 72 v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 72 VR-----SIPTLMLV-RDGKVIDKKVGA----LPKSQLKAWVESA 106 (107)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHT
T ss_pred CC-----ccCEEEEE-eCCEEEEEecCC----CCHHHHHHHHHhc
Confidence 86 57799999 899999877432 3567787777764
No 124
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.28 E-value=3.1e-11 Score=80.01 Aligned_cols=88 Identities=15% Similarity=0.172 Sum_probs=70.0
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
++++++|+|| +.||+.|....+.+.++.+++.+. +.++.|+.+. +.++++.|+
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------------------------~~~~~~~~~ 70 (106)
T 3die_A 18 ESGVQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE-------------------------NPSTAAKYE 70 (106)
T ss_dssp CSSEEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------------------------CHHHHHHTT
T ss_pred cCCcEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc-------------------------CHHHHHhCC
Confidence 6789999998 889999999999999999998754 8888888753 345677888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+.++++ +|+++..+.+. ...+++.+.|+++
T Consensus 71 v~-----~~Pt~~~~~-~G~~~~~~~g~----~~~~~l~~~l~~~ 105 (106)
T 3die_A 71 VM-----SIPTLIVFK-DGQPVDKVVGF----QPKENLAEVLDKH 105 (106)
T ss_dssp CC-----SBSEEEEEE-TTEEEEEEESC----CCHHHHHHHHHTT
T ss_pred Cc-----ccCEEEEEe-CCeEEEEEeCC----CCHHHHHHHHHHh
Confidence 86 567888885 99999887432 4567788777654
No 125
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.27 E-value=2e-11 Score=80.99 Aligned_cols=88 Identities=10% Similarity=0.115 Sum_probs=68.7
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.||+++|+|| ++||+.|....+.+.++.+++.+ ++.++.|+.+. +.++++.|+
T Consensus 16 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~-------------------------~~~~~~~~~ 68 (105)
T 1nsw_A 16 GDGPVLVDFW-AAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDE-------------------------NPETTSQFG 68 (105)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTT-------------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcC-------------------------CHHHHHHcC
Confidence 4688989888 88999999999999999988865 48888888754 245777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 69 v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 69 IM-----SIPTLILF-KGGRPVKQLIGY----QPKEQLEAQLADV 103 (105)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHTTTT
T ss_pred Cc-----cccEEEEE-eCCeEEEEEecC----CCHHHHHHHHHHH
Confidence 86 56899999 899999887532 3456677776654
No 126
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.26 E-value=4.6e-11 Score=80.30 Aligned_cols=88 Identities=17% Similarity=0.283 Sum_probs=66.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+||+++|.|| ++||++|....+.+.++.+++...++.++.|+.+. +.++++.|+
T Consensus 20 ~~~~~~v~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------------------------~~~~~~~~~ 73 (112)
T 3d6i_A 20 GDKLIVLYFH-TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE-------------------------NSEISELFE 73 (112)
T ss_dssp TTCCEEEEEE-CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT-------------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc-------------------------CHHHHHHcC
Confidence 4788999998 88999999999999999988765679999998874 236778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ..+++.+.|+++
T Consensus 74 v~-----~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 107 (112)
T 3d6i_A 74 IS-----AVPYFIII-HKGTILKELSGA-----DPKEYVSLLEDC 107 (112)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEECSC-----CHHHHHHHHHHH
T ss_pred CC-----cccEEEEE-ECCEEEEEecCC-----CHHHHHHHHHHH
Confidence 86 56787777 699999888421 234566666554
No 127
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.26 E-value=3.5e-11 Score=82.13 Aligned_cols=88 Identities=10% Similarity=0.097 Sum_probs=69.4
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.||++||+|| +.||+.|....+.|.++.+++.. ++.++.|+.+. +.++++.|+
T Consensus 30 ~~k~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~-------------------------~~~l~~~~~ 82 (119)
T 1w4v_A 30 SETPVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD-------------------------HTDLAIEYE 82 (119)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT-------------------------THHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC-------------------------CHHHHHHcC
Confidence 4788999988 88999999999999999988865 58999988763 346778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 83 v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 83 VS-----AVPTVLAM-KNGDVVDKFVGI----KDEDQLEAFLKKL 117 (119)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CC-----cccEEEEE-eCCcEEEEEcCC----CCHHHHHHHHHHH
Confidence 87 56788888 899999877432 2466777777654
No 128
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.26 E-value=5.5e-11 Score=79.11 Aligned_cols=88 Identities=8% Similarity=0.185 Sum_probs=68.0
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|+|| ++||+.|....+.+.++.+++.. ++.++.|+.+. +.++++.|+
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~-------------------------~~~~~~~~~ 70 (107)
T 1dby_A 18 SSVPVLVDFW-APWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDE-------------------------SPNVASEYG 70 (107)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT-------------------------CHHHHHHHT
T ss_pred CCCcEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCC-------------------------CHHHHHHCC
Confidence 4788999888 88999999999999999988875 48888888754 346778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 71 v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 105 (107)
T 1dby_A 71 IR-----SIPTIMVF-KGGKKCETIIGA----VPKATIVQTVEKY 105 (107)
T ss_dssp CC-----SSCEEEEE-SSSSEEEEEESC----CCHHHHHHHHHHH
T ss_pred CC-----cCCEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 86 56787666 799999887532 2456677777654
No 129
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.26 E-value=3.3e-11 Score=80.99 Aligned_cols=88 Identities=10% Similarity=0.208 Sum_probs=67.8
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.||+++|+|| +.||+.|....+.+.++.+++.. ++.++.|+.+. +.++++.|+
T Consensus 22 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~-------------------------~~~~~~~~~ 74 (112)
T 1t00_A 22 NDKPVLVDFW-AAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDE-------------------------NPGTAAKYG 74 (112)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT-------------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCC-------------------------CHHHHHhCC
Confidence 4688989888 88999999999999999998865 48999988764 245777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+.+++ ++|+++..+.+. ...+++.+.|+++
T Consensus 75 v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 109 (112)
T 1t00_A 75 VM-----SIPTLNVY-QGGEVAKTIVGA----KPKAAIVRDLEDF 109 (112)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHTHHH
T ss_pred CC-----cccEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 86 56676666 799999887532 3456777777654
No 130
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.26 E-value=3.4e-11 Score=83.03 Aligned_cols=86 Identities=15% Similarity=0.168 Sum_probs=67.8
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+||+++|+|| ++||+.|....+.|.++.+++. ++.++.|+.|. +.++++.|+
T Consensus 37 ~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~-------------------------~~~l~~~~~ 88 (124)
T 1xfl_A 37 SKTLVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE-------------------------LKSVASDWA 88 (124)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------------------------SHHHHHHTT
T ss_pred cCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc-------------------------CHHHHHHcC
Confidence 5889999988 8899999999999999988875 68888888753 346778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+ ...+++.+.|+++
T Consensus 89 v~-----~~Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 89 IQ-----AMPTFMFL-KEGKILDKVVG-----AKKDELQSTIAKH 122 (124)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHHH
T ss_pred CC-----ccCEEEEE-ECCEEEEEEeC-----CCHHHHHHHHHHh
Confidence 86 56676655 89999988742 2467777777765
No 131
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.25 E-value=3.5e-11 Score=80.95 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=68.6
Q ss_pred CCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 39 ~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
.+||+++|+|| +.||+.|+...+.+.++.+++. ++.++.|..+. +.++++.|
T Consensus 22 ~~~k~vlv~f~-a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~-------------------------~~~l~~~~ 73 (109)
T 3f3q_A 22 AQDKLVVVDFY-ATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDE-------------------------LGDVAQKN 73 (109)
T ss_dssp TSSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------------------------CHHHHHHT
T ss_pred hcCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC-------------------------CHHHHHHc
Confidence 35789999998 8899999999999999998885 48888887652 35677888
Q ss_pred CCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
++. ..|++++++ +|+++.++.+. ..+++.+.|+++
T Consensus 74 ~v~-----~~Pt~~~~~-~G~~~~~~~G~-----~~~~l~~~i~~~ 108 (109)
T 3f3q_A 74 EVS-----AMPTLLLFK-NGKEVAKVVGA-----NPAAIKQAIAAN 108 (109)
T ss_dssp TCC-----SSSEEEEEE-TTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred CCC-----ccCEEEEEE-CCEEEEEEeCC-----CHHHHHHHHHhh
Confidence 887 567988887 99999888532 346777777654
No 132
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.25 E-value=7.5e-12 Score=87.42 Aligned_cols=93 Identities=16% Similarity=0.121 Sum_probs=68.5
Q ss_pred ecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchH
Q psy2878 35 TESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSL 114 (181)
Q Consensus 35 ~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 114 (181)
.+++.+||++||.|| ++||++|....+.|.++.+++ ++.++.|..+. +.++
T Consensus 34 ~l~~~~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~-------------------------~~~l 84 (133)
T 3cxg_A 34 VFSSTQNSSIVIKFG-AVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI-------------------------HPKL 84 (133)
T ss_dssp HHTC-CCSEEEEEEE-CTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT-------------------------CHHH
T ss_pred HHHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc-------------------------hHHH
Confidence 345667899999998 889999999999888876655 57777777543 3567
Q ss_pred HHHhCCCCCCCcceeeEEEE-cCCCc--EEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 115 IDQLGIRHETGVALRATFIF-DPQNI--IQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 115 ~~~~gv~~~~g~~~p~~~li-D~~g~--i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
++.|++. ..|+++++ |++|+ ++..+.+ ...+++.+.|+++..
T Consensus 85 ~~~~~v~-----~~Pt~~~~~~~~g~g~~~~~~~G-----~~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 85 NDQHNIK-----ALPTFEFYFNLNNEWVLVHTVEG-----ANQNDIEKAFQKYCL 129 (133)
T ss_dssp HHHTTCC-----SSSEEEEEEEETTEEEEEEEEES-----CCHHHHHHHHHHHSE
T ss_pred HHhcCCC-----CCCEEEEEEecCCCeEEEEEEcC-----CCHHHHHHHHHHHHH
Confidence 8889987 56798888 55666 8877742 146788888877643
No 133
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.24 E-value=5.6e-11 Score=79.07 Aligned_cols=88 Identities=14% Similarity=0.208 Sum_probs=70.0
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
++++++|+|| +.||+.|....+.+.++.+++.+ .+.++.|..+. +.++++.|+
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------------------------~~~~~~~~~ 72 (109)
T 3tco_A 20 NNKLVLVDCW-AEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDE-------------------------NQKIADKYS 72 (109)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-------------------------CHHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHhhhHHHHHHHHHhCC-CceEEEEcccc-------------------------CHHHHHhcC
Confidence 4788999998 88999999999999999998875 48888887643 346777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 73 i~-----~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 107 (109)
T 3tco_A 73 VL-----NIPTTLIF-VNGQLVDSLVGA----VDEDTLESTVNKY 107 (109)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred cc-----cCCEEEEE-cCCcEEEeeecc----CCHHHHHHHHHHH
Confidence 86 57899999 899999887532 3567777777664
No 134
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.24 E-value=6.2e-11 Score=78.99 Aligned_cols=88 Identities=14% Similarity=0.212 Sum_probs=68.8
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|.|| +.||+.|....+.+.++.+++.. ++.++.|+.+. +.++++.|+
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~-------------------------~~~~~~~~~ 71 (108)
T 2trx_A 19 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ-------------------------NPGTAPKYG 71 (108)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT-------------------------CTTHHHHTT
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCC-------------------------CHHHHHHcC
Confidence 4688888888 88999999999999999988865 48888887653 235778899
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 72 v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 106 (108)
T 2trx_A 72 IR-----GIPTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 106 (108)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred Cc-----ccCEEEEE-eCCEEEEEEecC----CCHHHHHHHHHHh
Confidence 87 56799999 799999887432 3456777777654
No 135
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.24 E-value=1.3e-11 Score=86.34 Aligned_cols=91 Identities=18% Similarity=0.140 Sum_probs=70.7
Q ss_pred CCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 37 SSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 37 ~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
++.+||+++|+|| ++||++|..+.+.+.++.+++. ++.++.|+.|. +.++++
T Consensus 42 ~~~~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~-------------------------~~~~~~ 93 (139)
T 3d22_A 42 ASRDGKIVLANFS-ARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE-------------------------LSDFSA 93 (139)
T ss_dssp HHHHTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------------------------SHHHHH
T ss_pred HhhcCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc-------------------------cHHHHH
Confidence 3346899999998 8899999999999999998874 69999998863 346778
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
.|++. ..|+++++ ++|+++..+.+. ..+++.+.|+++..
T Consensus 94 ~~~v~-----~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 94 SWEIK-----ATPTFFFL-RDGQQVDKLVGA-----NKPELHKKITAILD 132 (139)
T ss_dssp HTTCC-----EESEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHHHH
T ss_pred HcCCC-----cccEEEEE-cCCeEEEEEeCC-----CHHHHHHHHHHHhc
Confidence 88886 67787777 899999888532 35667777766543
No 136
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.24 E-value=4.5e-11 Score=81.88 Aligned_cols=88 Identities=14% Similarity=0.189 Sum_probs=70.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
++|+++|+|| +.||+.|....+.|.++.+++...++.++.|+.+. +.++++.|+
T Consensus 32 ~~k~vvv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~-------------------------~~~~~~~~~ 85 (121)
T 2j23_A 32 GDKVVVIDFW-ATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE-------------------------QSQIAQEVG 85 (121)
T ss_dssp SSSCEEEEEE-CTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT-------------------------CHHHHHHHT
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC-------------------------CHHHHHHcC
Confidence 5788988888 88999999999999999999887779999998764 245777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ..+++.+.|+++
T Consensus 86 v~-----~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 119 (121)
T 2j23_A 86 IR-----AMPTFVFF-KNGQKIDTVVGA-----DPSKLQAAITQH 119 (121)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred CC-----cccEEEEE-ECCeEEeeEcCC-----CHHHHHHHHHHh
Confidence 86 56787777 599999887421 567777777664
No 137
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.23 E-value=5.4e-11 Score=79.80 Aligned_cols=87 Identities=14% Similarity=0.186 Sum_probs=67.9
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
+|+++|.|| +.||+.|....+.|.++.+++.+ ++.++.|+.+. +.++++.|++
T Consensus 24 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------------------------~~~~~~~~~v 76 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA-------------------------VAAVAEAAGI 76 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-------------------------THHHHHHHTC
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc-------------------------hHHHHHHcCC
Confidence 788999998 88999999999999999988875 68999998753 3467788888
Q ss_pred CCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 121 RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 121 ~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
. ..|+.+++ ++|+++..+.+. +.+++.+.|+++.
T Consensus 77 ~-----~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~l 110 (112)
T 1ep7_A 77 T-----AMPTFHVY-KDGVKADDLVGA-----SQDKLKALVAKHA 110 (112)
T ss_dssp C-----BSSEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHHH
T ss_pred C-----cccEEEEE-ECCeEEEEEcCC-----CHHHHHHHHHHHh
Confidence 6 56775555 899999887421 4567777776653
No 138
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=1.2e-10 Score=80.52 Aligned_cols=90 Identities=17% Similarity=0.160 Sum_probs=69.9
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh---cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE---RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~---~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
.+++++|+|| +.||++|+...+.+.++.+++.+ .++.++.|..+. +.++++
T Consensus 24 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------------------------~~~l~~ 77 (133)
T 1x5d_A 24 SEDVWMVEFY-APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV-------------------------NQVLAS 77 (133)
T ss_dssp SSSEEEEEEE-CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT-------------------------CCHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC-------------------------CHHHHH
Confidence 4688888888 88999999999999999999974 458888887653 357888
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
.|++. ..|+++++++ |+++..+.+ ....+++.+.|+++.
T Consensus 78 ~~~v~-----~~Pt~~~~~~-g~~~~~~~G----~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 78 RYGIR-----GFPTIKIFQK-GESPVDYDG----GRTRSDIVSRALDLF 116 (133)
T ss_dssp HHTCC-----SSSEEEEEET-TEEEEEECS----CCSHHHHHHHHHHHH
T ss_pred hCCCC-----eeCeEEEEeC-CCceEEecC----CCCHHHHHHHHHHHh
Confidence 89987 5789999986 888777742 235677777776554
No 139
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.22 E-value=4.7e-11 Score=82.40 Aligned_cols=89 Identities=16% Similarity=0.171 Sum_probs=67.9
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|+|| +.||+.|....+.+.++.+++.+ .+.++.|..+. +.++++.|+
T Consensus 34 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------------------------~~~l~~~~~ 86 (130)
T 2dml_A 34 SDGLWLVEFY-APWCGHCQRLTPEWKKAATALKD-VVKVGAVNADK-------------------------HQSLGGQYG 86 (130)
T ss_dssp CSSCEEEEEE-CTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTT-------------------------CHHHHHHHT
T ss_pred CCCeEEEEEE-CCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCC-------------------------CHHHHHHcC
Confidence 4678888888 88999999999999999998875 38888887642 356788899
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|++++++++|+++..+.+ ....+++++.|.+.
T Consensus 87 v~-----~~Pt~~~~~~~~~~~~~~~G----~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 87 VQ-----GFPTIKIFGANKNKPEDYQG----GRTGEAIVDAALSA 122 (130)
T ss_dssp CC-----SSSEEEEESSCTTSCEECCS----CCSHHHHHHHHHHH
T ss_pred CC-----ccCEEEEEeCCCCeEEEeec----CCCHHHHHHHHHHH
Confidence 87 67899999999985555532 23556677766544
No 140
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.22 E-value=4e-11 Score=84.25 Aligned_cols=102 Identities=13% Similarity=0.140 Sum_probs=71.3
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.++++||.|| +.||+.|....+.+.++.+++.+ ++.++.|..+. +.++++.|+
T Consensus 23 ~~~~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~ 75 (140)
T 3hz4_A 23 SKKPVVVMFY-SPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIAT-------------------------NPWTAEKYG 75 (140)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTT-------------------------CHHHHHHHT
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCc-------------------------CHhHHHHCC
Confidence 4788999998 88999999999999999999976 48888888653 235777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc------CCccccCCCCCC
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT------GKLCACNRTLNG 178 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~------~~~~~~~~~~~~ 178 (181)
+. ..|+.+++ ++|+++..+.+. ...+++.+.|+++.. ....|.++..++
T Consensus 76 v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~ 130 (140)
T 3hz4_A 76 VQ-----GTPTFKFF-CHGRPVWEQVGQ----IYPSILKNAVRDMLQHGEECIRKSTPVGQDITG 130 (140)
T ss_dssp CC-----EESEEEEE-ETTEEEEEEESS----CCHHHHHHHHHHHHHHHHHHHHTSBC-------
T ss_pred CC-----cCCEEEEE-eCCcEEEEEcCC----CCHHHHHHHHHHHhcccccCcccccccCcccee
Confidence 87 67777777 799999887532 345666666655542 235666665443
No 141
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.22 E-value=8.1e-11 Score=77.46 Aligned_cols=87 Identities=13% Similarity=0.170 Sum_probs=68.3
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
++++++|+|| +.||+.|....+.+.++.+++.+ +.++.|+.+. +.++++.|+
T Consensus 15 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~-------------------------~~~~~~~~~ 66 (104)
T 2e0q_A 15 SHEIAVVDFW-AEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE-------------------------NPDIAARYG 66 (104)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------------------------CHHHHHHTT
T ss_pred cCCcEEEEEE-CCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC-------------------------CHHHHHhCC
Confidence 4688888888 88999999999999999888864 8898888753 245778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 67 v~-----~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 67 VM-----SLPTVIFF-KDGEPVDEIIGA----VPREEIEIRIKNL 101 (104)
T ss_dssp CC-----SSCEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred cc-----ccCEEEEE-ECCeEhhhccCC----CCHHHHHHHHHHH
Confidence 86 56798888 899999877432 3456777777654
No 142
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.21 E-value=4.6e-11 Score=82.85 Aligned_cols=88 Identities=13% Similarity=0.170 Sum_probs=69.0
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|+|| +.||+.|....+.+.++.+++.+ ++.++.|+.+. +.++++.|+
T Consensus 39 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~ 91 (128)
T 2o8v_B 39 ADGAILVDFW-AEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQ-------------------------NPGTAPKYG 91 (128)
T ss_dssp CSSEEEEEEE-CSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTT-------------------------CCTTSGGGT
T ss_pred cCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC-------------------------CHHHHHHcC
Confidence 4688888888 88999999999999999988875 48888888763 235667788
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 92 v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 92 IR-----GIPTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 126 (128)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CC-----ccCEEEEE-eCCEEEEEEcCC----CCHHHHHHHHHHh
Confidence 86 56799999 899999887532 3457777777654
No 143
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=7.4e-11 Score=81.08 Aligned_cols=96 Identities=9% Similarity=0.069 Sum_probs=71.7
Q ss_pred eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCC
Q psy2878 43 WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRH 122 (181)
Q Consensus 43 ~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~ 122 (181)
.++|.|| ++||++|....+.+.++.+++.+.++.++.|..+. +.++++.|++.
T Consensus 24 ~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~~~~~~~v~- 76 (126)
T 1x5e_A 24 DWMIEFY-APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE-------------------------QPGLSGRFIIN- 76 (126)
T ss_dssp EEEEEEE-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT-------------------------CHHHHHHTTCC-
T ss_pred CEEEEEE-CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC-------------------------CHHHHHHcCCc-
Confidence 4777777 89999999999999999999987689999988663 23477888886
Q ss_pred CCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhccCCcccc-CCC
Q psy2878 123 ETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTGKLCAC-NRT 175 (181)
Q Consensus 123 ~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~~~~~~-~~~ 175 (181)
..|+++++ ++|++ ..+.+ ....+++.+.|+++......|. .|.
T Consensus 77 ----~~Pt~~~~-~~G~~-~~~~G----~~~~~~l~~~l~~~~~~~~~~~~~~~ 120 (126)
T 1x5e_A 77 ----ALPTIYHC-KDGEF-RRYQG----PRTKKDFINFISDKEWKSIEPVSSWF 120 (126)
T ss_dssp ----SSSEEEEE-ETTEE-EECCS----CCCHHHHHHHHHTCGGGGSCEECCCC
T ss_pred ----ccCEEEEE-eCCeE-EEeec----CCCHHHHHHHHHHHhhccCCCchhhh
Confidence 56799999 89996 34422 2467888888887764433332 354
No 144
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.21 E-value=9e-11 Score=80.05 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=67.4
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|+|| +.||+.|....+.|.++.+++.+ +.++.|+.+. +.++++.|+
T Consensus 33 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~-------------------------~~~~~~~~~ 84 (122)
T 2vlu_A 33 AKKLVVIDFT-ASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE-------------------------LKPIAEQFS 84 (122)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------------------------CHHHHHHTT
T ss_pred cCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC-------------------------CHHHHHHcC
Confidence 5788999998 88999999999999999888764 8898888764 346778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+. ..|+.+++ ++|+++..+.+. . .+++.+.|+++.
T Consensus 85 v~-----~~Pt~~~~-~~G~~~~~~~G~----~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 85 VE-----AMPTFLFM-KEGDVKDRVVGA----I-KEELTAKVGLHA 119 (122)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESS----C-HHHHHHHHHHHH
T ss_pred CC-----cccEEEEE-eCCEEEEEEeCc----C-HHHHHHHHHHHh
Confidence 86 56675555 899999887432 1 677777777654
No 145
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.21 E-value=6.4e-12 Score=91.47 Aligned_cols=80 Identities=10% Similarity=-0.009 Sum_probs=59.7
Q ss_pred ecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchH
Q psy2878 35 TESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSL 114 (181)
Q Consensus 35 ~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 114 (181)
.+++++||+++|+|| ++|||+|+.++|.|.++++++. ++.++.|+.|... +.+.++ .-
T Consensus 48 ~l~~~~~k~vvv~F~-A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~---~~~~~~----~~------------ 105 (167)
T 1z6n_A 48 RLQRIERRYRLLVAG-EMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAE---DDLRQR----LA------------ 105 (167)
T ss_dssp HHHTCCSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHH---HHTTTT----TT------------
T ss_pred HHHHhCCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCH---HHHHHH----HH------------
Confidence 356778999999988 9999999999999999998764 6888888766321 222222 10
Q ss_pred HHHhCCCCCCCcceeeEEEEcCCCcEEEEE
Q psy2878 115 IDQLGIRHETGVALRATFIFDPQNIIQHIT 144 (181)
Q Consensus 115 ~~~~gv~~~~g~~~p~~~liD~~g~i~~~~ 144 (181)
.++. ..|+++++|++|+++.++
T Consensus 106 ---~~v~-----~iPt~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 106 ---LERI-----AIPLVLVLDEEFNLLGRF 127 (167)
T ss_dssp ---CSSC-----CSSEEEEECTTCCEEEEE
T ss_pred ---cCCC-----CcCeEEEECCCCCEEEEE
Confidence 1233 567999999999998877
No 146
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.20 E-value=4.5e-11 Score=79.66 Aligned_cols=87 Identities=7% Similarity=0.053 Sum_probs=62.2
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|+|| ++||++|....|.+.++.+++. ++.++.|+.|. +.++++.|+
T Consensus 17 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~-------------------------~~~l~~~~~ 68 (105)
T 4euy_A 17 EQQLVLLFIK-TENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD-------------------------MQEIAGRYA 68 (105)
T ss_dssp CSSEEEEEEE-ESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC-------------------------C--------
T ss_pred cCCCEEEEEe-CCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC-------------------------CHHHHHhcC
Confidence 5788999998 8899999999999999998884 68888888653 235667788
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|++++++ +|+++.++.+. ...+++.+.|+++
T Consensus 69 v~-----~~Pt~~~~~-~G~~~~~~~g~----~~~~~l~~~l~~~ 103 (105)
T 4euy_A 69 VF-----TGPTVLLFY-NGKEILRESRF----ISLENLERTIQLF 103 (105)
T ss_dssp -C-----CCCEEEEEE-TTEEEEEEESS----CCHHHHHHHHHTT
T ss_pred CC-----CCCEEEEEe-CCeEEEEEeCC----cCHHHHHHHHHHh
Confidence 76 567988885 99999887532 3567888888765
No 147
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.20 E-value=2.4e-11 Score=84.94 Aligned_cols=91 Identities=11% Similarity=0.157 Sum_probs=69.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcC--cEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERN--AILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~--~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
.+|++||+|| +.||+.|+...+.|.++.+++...+ +.++.|..+. +.++++.
T Consensus 33 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~~~~~ 86 (140)
T 2dj1_A 33 DKDTVLLEFY-APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS-------------------------ASMLASK 86 (140)
T ss_dssp TCSEEEEEEC-CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT-------------------------CHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc-------------------------cHHHHHH
Confidence 5788988888 8899999999999999999998764 6666665442 3567888
Q ss_pred hCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhccC
Q psy2878 118 LGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTG 167 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~ 167 (181)
|++. ..|+++++ ++|+ +..+.+ ....+++.+.|+++...
T Consensus 87 ~~v~-----~~Pt~~~~-~~G~-~~~~~g----~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 87 FDVS-----GYPTIKIL-KKGQ-AVDYDG----SRTQEEIVAKVREVSQP 125 (140)
T ss_dssp TTCC-----SSSEEEEE-ETTE-EEECCS----CCCHHHHHHHHHHHHSS
T ss_pred CCCC-----ccCeEEEE-ECCc-EEEcCC----CCCHHHHHHHHHHhcCC
Confidence 9986 56799999 7898 444422 24678888888776543
No 148
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.19 E-value=9.5e-11 Score=78.89 Aligned_cols=89 Identities=15% Similarity=0.182 Sum_probs=68.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+++++|+|| ++||+.|....+.+.++.+++. ++.++.|..+. +.++++.|+
T Consensus 18 ~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~-------------------------~~~l~~~~~ 69 (110)
T 2l6c_A 18 GLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA-------------------------RPELMKELG 69 (110)
T ss_dssp TCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG-------------------------CHHHHHHTT
T ss_pred cCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC-------------------------CHHHHHHcC
Confidence 4678888888 8899999999999998887764 57888777643 345778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+. ..|+++++ ++|+++.++.+. .+.+++.+.|++...
T Consensus 70 v~-----~~Pt~~~~-~~G~~v~~~~G~----~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 70 FE-----RVPTLVFI-RDGKVAKVFSGI----MNPRELQALYASIHH 106 (110)
T ss_dssp CC-----SSCEEEEE-ESSSEEEEEESC----CCHHHHHHHHHTC--
T ss_pred Cc-----ccCEEEEE-ECCEEEEEEcCC----CCHHHHHHHHHHHhh
Confidence 86 57899999 899999888532 356788888876653
No 149
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.19 E-value=8e-11 Score=77.97 Aligned_cols=89 Identities=11% Similarity=0.146 Sum_probs=69.4
Q ss_pred CCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 37 SSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 37 ~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
++.++|+++|.|| +.||+.|....+.+.++.+++. ++.++.|+.+. +.++++
T Consensus 16 ~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~-------------------------~~~~~~ 67 (105)
T 3m9j_A 16 DAAGDKLVVVDFS-ATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDD-------------------------CQDVAS 67 (105)
T ss_dssp HHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTT-------------------------CHHHHH
T ss_pred HhcCCCeEEEEEE-CCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhh-------------------------hHHHHH
Confidence 3446889999998 8899999999999999998885 48888888753 245777
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
.|++. ..|+.+++ ++|+++..+.+. ..+++.+.|+++
T Consensus 68 ~~~v~-----~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~l~~~ 104 (105)
T 3m9j_A 68 ESEVK-----SMPTFQFF-KKGQKVGEFSGA-----NKEKLEATINEL 104 (105)
T ss_dssp HTTCC-----BSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred HcCCC-----cCcEEEEE-ECCeEEEEEeCC-----CHHHHHHHHHHh
Confidence 88886 67899999 799998887421 556777777654
No 150
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.19 E-value=1.5e-10 Score=76.82 Aligned_cols=89 Identities=8% Similarity=0.146 Sum_probs=70.7
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|+|| +.||+.|....+.+.++.+++.+ ++.++.|+.+. +.++++.|+
T Consensus 17 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~-------------------------~~~~~~~~~ 69 (109)
T 2yzu_A 17 QHPLVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDE-------------------------NPKTAMRYR 69 (109)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT-------------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCC-------------------------CHhHHHhCC
Confidence 4688888888 88999999999999999988875 58888888764 235777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++.
T Consensus 70 v~-----~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 70 VM-----SIPTVILF-KDGQPVEVLVGA----QPKRNYQAKIEKHL 105 (109)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHTTC
T ss_pred CC-----cCCEEEEE-eCCcEeeeEeCC----CCHHHHHHHHHHHh
Confidence 86 56799999 899999877432 35678888887664
No 151
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.18 E-value=1.7e-10 Score=82.65 Aligned_cols=89 Identities=9% Similarity=0.096 Sum_probs=71.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.++++||+|| +.||++|....+.|.++.+++.. ++.++.|+.+. +.++++.|+
T Consensus 63 ~~~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~ 115 (155)
T 2ppt_A 63 DDLPLLVDFW-APWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQA-------------------------HPAVAGRHR 115 (155)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------------------------STHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCc-------------------------cHHHHHHcC
Confidence 5789999998 89999999999999999999975 48999988763 246788899
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++.
T Consensus 116 i~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 116 IQ-----GIPAFILF-HKGRELARAAGA----RPASELVGFVRGKL 151 (155)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred CC-----cCCEEEEE-eCCeEEEEecCC----CCHHHHHHHHHHHh
Confidence 87 56798888 799999887532 35677777777654
No 152
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.18 E-value=1.3e-10 Score=76.85 Aligned_cols=88 Identities=10% Similarity=0.159 Sum_probs=66.8
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+++++|+|| +.||+.|....+.+.++.+++++ ++.++.|+.+. +.++++.|+
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------------------------~~~~~~~~~ 69 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDE-------------------------APGIATQYN 69 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT-------------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcc-------------------------hHHHHHhCC
Confidence 4688988888 88999999999999999988875 48888888764 236777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+.+++ ++|+++..+.+. ...+++.+.|+++
T Consensus 70 v~-----~~Pt~~~~-~~g~~~~~~~G~----~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 70 IR-----SIPTVLFF-KNGERKESIIGA----VPKSTLTDSIEKY 104 (105)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEEEC----CCHHHHHHHHHHH
T ss_pred CC-----cccEEEEE-eCCeEEEEEecC----CCHHHHHHHHHhh
Confidence 76 56776666 799999887532 3456677776654
No 153
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.18 E-value=1.3e-12 Score=94.75 Aligned_cols=104 Identities=10% Similarity=0.051 Sum_probs=72.0
Q ss_pred eeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCc
Q psy2878 33 VITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNG 112 (181)
Q Consensus 33 ~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 112 (181)
.++.+..+||++||+|| ++||++|+.+.|.|.++.+.+.. ++.++.|+.+....
T Consensus 38 ~~~~~~~~~k~vlv~F~-a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~~~------------------------ 91 (164)
T 1sen_A 38 GKKEAAASGLPLMVIIH-KSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDEEE------------------------ 91 (164)
T ss_dssp HHHHHHHHTCCEEEEEE-CTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGGGS------------------------
T ss_pred HHHHHHhcCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCCch------------------------
Confidence 45555567899999999 89999999999999997665543 57788888764321
Q ss_pred hHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCC------CCCHHHHHHHHHhhc
Q psy2878 113 SLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNV------GRNPIETLRILDAIQ 165 (181)
Q Consensus 113 ~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~------~~~~~~ll~~l~~l~ 165 (181)
.+++.|++. +...|+++++|++|+++.+..+.... ....+++++.|+++.
T Consensus 92 ~~~~~~~~~---~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 92 PKDEDFSPD---GGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp CSCGGGCTT---CSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred HHHHHhccc---CCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 012234442 22468999999999999777532221 256788888877664
No 154
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.18 E-value=4.3e-11 Score=85.29 Aligned_cols=89 Identities=16% Similarity=0.122 Sum_probs=65.8
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|++||.|| ++||++|+.+.|.|.++.+++.++ +.++.|+.|. +.++++.|+
T Consensus 22 ~~k~vlv~F~-a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~-------------------------~~~l~~~~~ 74 (149)
T 3gix_A 22 AEKVLVLRFG-RDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ-------------------------TAVYTQYFD 74 (149)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT-------------------------CCHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc-------------------------CHHHHHHcC
Confidence 4789999998 999999999999999999888653 7888887642 346788888
Q ss_pred CCCCCCcceeeEEEEcCCCcEE---------EEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQ---------HITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~---------~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++ ++++|+++ .++.+. ....+++.+.|+++
T Consensus 75 v~-----~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~---~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 75 IS-----YIPSTV-FFFNGQHMKVDYGSPDHTKFVGS---FKTKQDFIDLIEVI 119 (149)
T ss_dssp CC-----SSSEEE-EEETTEEEEEECSSSCCSCEESC---CSSHHHHHHHHHHH
T ss_pred CC-----ccCeEE-EEECCeEEEeecCCCCCCeEeee---cCCHHHHHHHHHHH
Confidence 87 567887 66899999 444221 12445666666555
No 155
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.18 E-value=1.2e-10 Score=79.08 Aligned_cols=85 Identities=9% Similarity=0.177 Sum_probs=65.7
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+||+++|+|| +.||+.|....+.|.++.+++.+ +.++.|+.+. +.++++.|+
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~-------------------------~~~l~~~~~ 80 (114)
T 2oe3_A 29 QNDKLVIDFY-ATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE-------------------------SPDIAKECE 80 (114)
T ss_dssp HCSEEEEEEE-CTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT-------------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------------------------CHHHHHHCC
Confidence 5788989888 89999999999999999888764 8898888753 235777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDA 163 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~ 163 (181)
+. ..|+.+++ ++|+++..+.+. . .+++.+.|++
T Consensus 81 v~-----~~Pt~~~~-~~G~~~~~~~G~----~-~~~l~~~l~~ 113 (114)
T 2oe3_A 81 VT-----AMPTFVLG-KDGQLIGKIIGA----N-PTALEKGIKD 113 (114)
T ss_dssp CC-----SBSEEEEE-ETTEEEEEEESS----C-HHHHHHHHHT
T ss_pred CC-----cccEEEEE-eCCeEEEEEeCC----C-HHHHHHHHHh
Confidence 86 56776665 899999887432 1 5677777764
No 156
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.18 E-value=1.8e-10 Score=76.94 Aligned_cols=88 Identities=11% Similarity=0.207 Sum_probs=69.2
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+++++|.|| +.||+.|....+.+.++.+++.+ ++.++.|..+. +.++++.|+
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~ 73 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEE-------------------------EKTLFQRFS 73 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-------------------------CHHHHHHTT
T ss_pred cCCEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCc-------------------------ChhHHHhcC
Confidence 4688999998 88999999999999999988875 58888888753 236777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 74 v~-----~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 74 LK-----GVPQILYF-KDGEYKGKMAGD----VEDDEVEQMIADV 108 (111)
T ss_dssp CC-----SSCEEEEE-ETTEEEEEEESS----CCHHHHHHHHHHH
T ss_pred CC-----cCCEEEEE-ECCEEEEEEecc----CCHHHHHHHHHHH
Confidence 86 57798888 699998877432 3567777777654
No 157
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.18 E-value=1.5e-10 Score=76.47 Aligned_cols=89 Identities=10% Similarity=0.118 Sum_probs=68.6
Q ss_pred CCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 37 SSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 37 ~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
++..||+++|.|| +.||+.|....+.+.++.+++. ++.++.|+.+. +.++++
T Consensus 15 ~~~~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------------------------~~~~~~ 66 (104)
T 2vim_A 15 NENKGRLIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ-------------------------NEEAAA 66 (104)
T ss_dssp HTTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------------------------CHHHHH
T ss_pred HhcCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC-------------------------CHHHHH
Confidence 3446889999998 8899999999999999988875 79999998763 245777
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
.|++. ..|+.+++ ++|+++..+.+ .+.+++.+.|+++
T Consensus 67 ~~~v~-----~~Pt~~~~-~~g~~~~~~~G-----~~~~~l~~~l~~~ 103 (104)
T 2vim_A 67 KYSVT-----AMPTFVFI-KDGKEVDRFSG-----ANETKLRETITRH 103 (104)
T ss_dssp HTTCC-----SSSEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred HcCCc-----cccEEEEE-eCCcEEEEEeC-----CCHHHHHHHHHhh
Confidence 88886 56786666 59999888742 2456777777654
No 158
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.17 E-value=5e-11 Score=82.57 Aligned_cols=94 Identities=16% Similarity=0.217 Sum_probs=65.7
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhc-CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNER-NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~-~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
.+++++|+|| +.||++|....+.|.++.+++... ++.++.|..+. +..+++.|
T Consensus 24 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~-------------------------~~~~~~~~ 77 (133)
T 2dj3_A 24 PKKDVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA-------------------------NDITNDQY 77 (133)
T ss_dssp TTSEEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT-------------------------SCCCCSSC
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc-------------------------CHHHHhhc
Confidence 4788999998 889999999999999999999763 57777666542 12334567
Q ss_pred CCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
++. ..|+++++++.+++....... ...+.+++.+.|+++..
T Consensus 78 ~v~-----~~Pt~~~~~~g~~~~~~~~~g--g~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 78 KVE-----GFPTIYFAPSGDKKNPIKFEG--GNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp CCS-----SSSEEEEECTTCTTSCEECCS--SCCSTTHHHHHHHHHSS
T ss_pred CCC-----cCCEEEEEeCCCcccceEecC--CCcCHHHHHHHHHHhcc
Confidence 776 578999998777654322111 12355677777776654
No 159
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.79 E-value=2.4e-12 Score=89.03 Aligned_cols=100 Identities=12% Similarity=0.138 Sum_probs=72.6
Q ss_pred eeeecCCCCCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEE
Q psy2878 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFS 108 (181)
Q Consensus 32 ~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~ 108 (181)
+.+.++..+||++||+|| +.||++|+...+.+ .++.+.+.. ++.++.|..+..
T Consensus 10 ~~~~~~~~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~---------------------- 65 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP---------------------- 65 (130)
Confidence 678888888999999998 89999999999988 777776654 477777776532
Q ss_pred cCCchHHHHhCCCCCCCcceeeEEEEcC-CCcE--EEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 109 DTNGSLIDQLGIRHETGVALRATFIFDP-QNII--QHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 109 D~~~~~~~~~gv~~~~g~~~p~~~liD~-~g~i--~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
.+.++++.|++. ..|+++++|+ +|++ +.++.+. ...+++.+.|+++.
T Consensus 66 -~~~~~~~~~~v~-----~~Pt~~~~d~~~G~~~~~~~~~G~----~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 66 -EGQELARRYRVP-----GTPTFVFLVPKAGAWEEVGRLFGS----RPRAEFLKELRQVC 115 (130)
Confidence 134677788876 5789999996 5998 7666432 22345555555544
No 160
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.17 E-value=6.9e-11 Score=80.18 Aligned_cols=88 Identities=13% Similarity=0.170 Sum_probs=67.3
Q ss_pred CCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 37 SSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 37 ~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
++.+||+++|.|| +.||+.|....+.+.++.+++ ++.++.|+.+. +.++++
T Consensus 29 ~~~~~~~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~-------------------------~~~~~~ 79 (117)
T 2xc2_A 29 EQHKNKLVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK-------------------------LEETAR 79 (117)
T ss_dssp HHTTTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT-------------------------SHHHHH
T ss_pred HhCCCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc-------------------------cHHHHH
Confidence 3346889999998 889999999999999988777 78888888753 346778
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
.|++. ..|+.+++ ++|+++..+.+ ...+++.+.|+++
T Consensus 80 ~~~v~-----~~Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 80 KYNIS-----AMPTFIAI-KNGEKVGDVVG-----ASIAKVEDMIKKF 116 (117)
T ss_dssp HTTCC-----SSSEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred HcCCC-----ccceEEEE-eCCcEEEEEeC-----CCHHHHHHHHHHh
Confidence 88886 56675555 79999988742 2456777777654
No 161
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.17 E-value=1.9e-10 Score=81.94 Aligned_cols=88 Identities=8% Similarity=0.118 Sum_probs=70.8
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
++|++||.|| +.||+.|+...+.+.++.+++. ++.++.|..+. +.++++.|+
T Consensus 31 ~~~~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~-------------------------~~~l~~~~~ 82 (153)
T 2wz9_A 31 AKSLLVVHFW-APWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG-------------------------VPEVSEKYE 82 (153)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------------------------SHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC-------------------------CHHHHHHcC
Confidence 4889999998 8899999999999999988873 68999988764 236778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+. ..|++++++ +|+++..+.+ ...+++.+.|+++..
T Consensus 83 v~-----~~Pt~~~~~-~G~~~~~~~G-----~~~~~l~~~i~~~l~ 118 (153)
T 2wz9_A 83 IS-----SVPTFLFFK-NSQKIDRLDG-----AHAPELTKKVQRHAS 118 (153)
T ss_dssp CC-----SSSEEEEEE-TTEEEEEEES-----SCHHHHHHHHHHHSC
T ss_pred CC-----CCCEEEEEE-CCEEEEEEeC-----CCHHHHHHHHHHHhc
Confidence 87 578999999 9999988742 245678888877654
No 162
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.16 E-value=2e-10 Score=89.74 Aligned_cols=91 Identities=19% Similarity=0.261 Sum_probs=69.7
Q ss_pred CCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 37 SSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 37 ~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
...+||+++|.|| ++||++|+...|.+.++.+++.+ ++.++.|+.+.. .++++
T Consensus 22 ~~~~~~~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-------------------------~~~~~ 74 (287)
T 3qou_A 22 EQSMTTPVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE-------------------------QMIAA 74 (287)
T ss_dssp TTTTTSCEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC-------------------------HHHHH
T ss_pred HhcCCCeEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC-------------------------HHHHH
Confidence 3345899999999 88999999999999999999985 488998887642 36778
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
.|++. ..|+++++ ++|+++..+.+. ...+.+.+.++..
T Consensus 75 ~~~v~-----~~Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~ 112 (287)
T 3qou_A 75 QFGLR-----AIPTVYLF-QNGQPVDGFQGP----QPEEAIRALLDXV 112 (287)
T ss_dssp TTTCC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred HcCCC-----CCCeEEEE-ECCEEEEEeeCC----CCHHHHHHHHHHH
Confidence 88887 56788888 699999887532 2345555555543
No 163
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.16 E-value=1.9e-10 Score=77.68 Aligned_cols=88 Identities=16% Similarity=0.188 Sum_probs=68.7
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.||+++|+|| +.||+.|....+.+.++.+++. ++.++.|+.+. +.++++.|+
T Consensus 27 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------------------------~~~~~~~~~ 78 (118)
T 2vm1_A 27 TGKLVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE-------------------------LKDVAEAYN 78 (118)
T ss_dssp HTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------------------------SHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc-------------------------CHHHHHHcC
Confidence 4788999998 8899999999999999988876 78898888753 346777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+. ..|+.+++ ++|+++..+.+ ...+++.+.|+++..
T Consensus 79 v~-----~~Pt~~~~-~~g~~~~~~~g-----~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 79 VE-----AMPTFLFI-KDGEKVDSVVG-----GRKDDIHTKIVALMG 114 (118)
T ss_dssp CC-----SBSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHHHHC
T ss_pred CC-----cCcEEEEE-eCCeEEEEecC-----CCHHHHHHHHHHHhc
Confidence 86 56787776 79999987742 246777777776654
No 164
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.16 E-value=1.5e-10 Score=79.00 Aligned_cols=89 Identities=10% Similarity=0.151 Sum_probs=69.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.|+++||+|| ++||+.|+...+.|.++.+++ .++.++.|+.+.. .++++.|+
T Consensus 22 ~~~~vlv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~-------------------------~~~~~~~~ 73 (118)
T 2f51_A 22 APGLVLVDFF-ATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKN-------------------------GNAADAYG 73 (118)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTC-------------------------HHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCC-------------------------HHHHHhcC
Confidence 4788999988 889999999999999999888 5799999987642 35777888
Q ss_pred CCCCCCcceeeEEEEcC---CCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 120 IRHETGVALRATFIFDP---QNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~---~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+. ..|++++++. +|+++.++.+ ...+++.+.+++...
T Consensus 74 i~-----~~Pt~~~~~~~~~~G~~~~~~~G-----~~~~~l~~~~~~~~~ 113 (118)
T 2f51_A 74 VS-----SIPALFFVKKEGNEIKTLDQFVG-----ADVSRIKADIEKFKH 113 (118)
T ss_dssp CC-----SSSEEEEEEEETTEEEEEEEEES-----CCHHHHHHHHHHHC-
T ss_pred CC-----CCCEEEEEeCCCCcceEEEeecC-----CCHHHHHHHHHHhhh
Confidence 86 5679999975 4999988853 334667777776653
No 165
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.14 E-value=3.1e-10 Score=75.09 Aligned_cols=88 Identities=14% Similarity=0.201 Sum_probs=67.4
Q ss_pred CCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 39 ~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
.++++++|.|| +.||+.|....+.+.++.++++ .++.++.|+.+. +.++++.|
T Consensus 18 ~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~-------------------------~~~~~~~~ 70 (106)
T 1xwb_A 18 ASGKLVVLDFF-ATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDE-------------------------CEDIAMEY 70 (106)
T ss_dssp HTTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTT-------------------------CHHHHHHT
T ss_pred cCCCEEEEEEE-CCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccc-------------------------hHHHHHHc
Confidence 46788999988 8899999999999999998886 368888888763 34677888
Q ss_pred CCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
++. ..|+.+++ ++|+++..+.+ .+.+++.+.|+++
T Consensus 71 ~v~-----~~Pt~~~~-~~G~~~~~~~g-----~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 71 NIS-----SMPTFVFL-KNGVKVEEFAG-----ANAKRLEDVIKAN 105 (106)
T ss_dssp TCC-----SSSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHHT
T ss_pred CCC-----cccEEEEE-cCCcEEEEEcC-----CCHHHHHHHHHHh
Confidence 886 56675555 79999988742 2456777777654
No 166
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.13 E-value=3.1e-10 Score=75.62 Aligned_cols=86 Identities=8% Similarity=0.055 Sum_probs=65.6
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
++|+++|.|| ++||++|....|.+.++.+++. ++.++.|..+.. .++++.|+
T Consensus 20 ~~~~v~v~f~-a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~-------------------------~~~~~~~~ 71 (107)
T 1gh2_A 20 GSRLAVVKFT-MRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQC-------------------------QGTAATNN 71 (107)
T ss_dssp TTSCEEEEEE-CSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-------------------------HHHHHHTT
T ss_pred CCCEEEEEEE-CCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccC-------------------------HHHHHhcC
Confidence 5788999988 8899999999999999998883 688988887642 35677888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+.+++ ++|+++..+.+ ...+++.+.|+++
T Consensus 72 v~-----~~Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 72 IS-----ATPTFQFF-RNKVRIDQYQG-----ADAVGLEEKIKQH 105 (107)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred CC-----cccEEEEE-ECCeEEEEEeC-----CCHHHHHHHHHHh
Confidence 86 56787777 79999987743 2234566666543
No 167
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.13 E-value=2.7e-10 Score=78.64 Aligned_cols=87 Identities=16% Similarity=0.172 Sum_probs=67.8
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+++++||.|| +.||+.|....+.|.++.+++. ++.++.|..+. +.++++.|+
T Consensus 36 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~-------------------------~~~l~~~~~ 87 (125)
T 1r26_A 36 EDILTVAWFT-AVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN-------------------------NSEIVSKCR 87 (125)
T ss_dssp SSSCEEEEEE-CTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT-------------------------CHHHHHHTT
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC-------------------------CHHHHHHcC
Confidence 5788999998 8899999999999999998884 69999998863 245778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+. ..|+++++ ++|+++..+.+ ...+++.+.|+++.
T Consensus 88 v~-----~~Pt~~i~-~~G~~~~~~~G-----~~~~~l~~~l~~~l 122 (125)
T 1r26_A 88 VL-----QLPTFIIA-RSGKMLGHVIG-----ANPGMLRQKLRDII 122 (125)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHHH
T ss_pred CC-----cccEEEEE-eCCeEEEEEeC-----CCHHHHHHHHHHHh
Confidence 86 56776655 89999988742 24467777776553
No 168
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.12 E-value=3.4e-10 Score=76.16 Aligned_cols=86 Identities=9% Similarity=0.208 Sum_probs=66.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+||+++|+|| +.||+.|....+.+.++.+++. ++.++.|+.+.. .++++.|+
T Consensus 25 ~~k~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~-------------------------~~~~~~~~ 76 (112)
T 1syr_A 25 QNELVIVDFF-AEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEV-------------------------SEVTEKEN 76 (112)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTT-------------------------HHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCC-------------------------HHHHHHcC
Confidence 5788988888 8899999999999999988875 589999987642 25677888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+.+++ ++|+++..+.+ ...+++.+.|+++
T Consensus 77 v~-----~~Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 110 (112)
T 1syr_A 77 IT-----SMPTFKVY-KNGSSVDTLLG-----ANDSALKQLIEKY 110 (112)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHTT
T ss_pred CC-----cccEEEEE-ECCcEEEEEeC-----CCHHHHHHHHHHh
Confidence 76 56675555 69999887742 1567777777764
No 169
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.11 E-value=2.3e-10 Score=76.73 Aligned_cols=89 Identities=13% Similarity=0.163 Sum_probs=66.2
Q ss_pred CCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 37 SSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 37 ~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
+...|++++|+|| +.||+.|....+.+.++.+++. ++.++.|+.+. +.++++
T Consensus 22 ~~~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------------------------~~~~~~ 73 (113)
T 1ti3_A 22 GKGSQKLIVVDFT-ASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE-------------------------LKAVAE 73 (113)
T ss_dssp HTTSSSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------------------------CHHHHH
T ss_pred hhhcCCeEEEEEE-CCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc-------------------------cHHHHH
Confidence 3345888988888 8899999999999999988875 68888888753 245677
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
.|++. ..|+.+++ ++|+++..+.+ . +.+++.+.|+++
T Consensus 74 ~~~v~-----~~Pt~~~~-~~G~~~~~~~g-~----~~~~l~~~l~~~ 110 (113)
T 1ti3_A 74 EWNVE-----AMPTFIFL-KDGKLVDKTVG-A----DKDGLPTLVAKH 110 (113)
T ss_dssp HHHCS-----STTEEEEE-ETTEEEEEEEC-C----CTTHHHHHHHHH
T ss_pred hCCCC-----cccEEEEE-eCCEEEEEEec-C----CHHHHHHHHHHh
Confidence 78876 56687777 69999988853 2 234555555544
No 170
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.10 E-value=1.6e-10 Score=80.64 Aligned_cols=94 Identities=9% Similarity=0.014 Sum_probs=66.8
Q ss_pred eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCC
Q psy2878 43 WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRH 122 (181)
Q Consensus 43 ~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~ 122 (181)
+++|+|| ++||++|+.+.|.+.++.++++ +.++.|+.+....... . |.+.++++.|++.
T Consensus 33 ~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~-~---------------d~~~~l~~~~~v~- 91 (135)
T 3emx_A 33 DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERE-L---------------SAARLEMNKAGVE- 91 (135)
T ss_dssp SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHH-H---------------HHHHHHHHHHTCC-
T ss_pred cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhh-h---------------hhhHHHHHHcCCc-
Confidence 7888888 8899999999999999987774 8899998865332211 1 2236788999987
Q ss_pred CCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 123 ETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 123 ~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
..|+.++++ +|+++.++.+. ...+.+.+.++++..
T Consensus 92 ----~~Pt~~~~~-~G~~v~~~~G~----~~~~~~~~~i~~~~~ 126 (135)
T 3emx_A 92 ----GTPTLVFYK-EGRIVDKLVGA----TPWSLKVEKAREIYG 126 (135)
T ss_dssp ----SSSEEEEEE-TTEEEEEEESC----CCHHHHHHHHHHHC-
T ss_pred ----eeCeEEEEc-CCEEEEEEeCC----CCHHHHHHHHHHHhC
Confidence 567666665 99999988532 334555556666554
No 171
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.09 E-value=5.2e-10 Score=84.58 Aligned_cols=91 Identities=14% Similarity=0.236 Sum_probs=71.6
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
++|+++|.|| +.||++|+.+.|.+.++.+++.++ +.++.|+.+. +..+++.|+
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------------------------~~~l~~~~~ 81 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------------------------NPGTAPKYG 81 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------------------------CTTTGGGGT
T ss_pred cCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC-------------------------CHHHHHHcC
Confidence 4789999998 899999999999999999998754 8888888753 234567888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhccC
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTG 167 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~ 167 (181)
+. ..|++++++ +|+++..+.+. ...+++.+.|+++..+
T Consensus 82 v~-----~~Pt~~~~~-~G~~~~~~~G~----~~~~~l~~~l~~~l~~ 119 (222)
T 3dxb_A 82 IR-----GIPTLLLFK-NGEVAATKVGA----LSKGQLKEFLDANLAG 119 (222)
T ss_dssp CC-----SBSEEEEEE-TTEEEEEEESC----CCHHHHHHHHHHHSCC
T ss_pred CC-----cCCEEEEEE-CCeEEEEeccc----cChHHHHHHHHhhccc
Confidence 87 567887774 99999887532 4567888888777643
No 172
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.09 E-value=5e-10 Score=76.00 Aligned_cols=89 Identities=11% Similarity=0.147 Sum_probs=68.6
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+++++|+|| +.||+.|....+.+.++.+++.. ++.++.|+.+. +.++++.|+
T Consensus 29 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------------------------~~~~~~~~~ 81 (121)
T 2i1u_A 29 SNKPVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDT-------------------------NPETARNFQ 81 (121)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT-------------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCC-------------------------CHHHHHhcC
Confidence 4688989988 88999999999999999988865 58899888764 235777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+. ..|+++++ ++|+++..+.+. ...+++.+.|+++.
T Consensus 82 i~-----~~Pt~~~~-~~g~~~~~~~G~----~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 82 VV-----SIPTLILF-KDGQPVKRIVGA----KGKAALLRELSDVV 117 (121)
T ss_dssp CC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHTCSCC
T ss_pred CC-----cCCEEEEE-ECCEEEEEecCC----CCHHHHHHHHHHHH
Confidence 86 56787777 599998887432 34567777776554
No 173
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.08 E-value=1.9e-10 Score=78.44 Aligned_cols=94 Identities=10% Similarity=0.067 Sum_probs=69.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|.|| +.||+.|....+.+.++.+++.. ++.++.|..+.. .++++.|+
T Consensus 20 ~~~~~lv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-------------------------~~~~~~~~ 72 (122)
T 3aps_A 20 GKTHWVVDFY-APWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAY-------------------------PQTCQKAG 72 (122)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC-------------------------HHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCC-------------------------HHHHHHcC
Confidence 4688999988 88999999999999999998875 689998887642 35777888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+. ..|+++++++.|.+ ..+.+......+.+++.+.|+++..
T Consensus 73 v~-----~~Pt~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 73 IK-----AYPSVKLYQYERAK-KSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp CC-----SSSEEEEEEEEGGG-TEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred CC-----ccceEEEEeCCCcc-ceeeccccCcCCHHHHHHHHHHHHH
Confidence 87 57899999887774 3332211012456777777766643
No 174
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.08 E-value=7.7e-11 Score=88.33 Aligned_cols=91 Identities=12% Similarity=0.131 Sum_probs=71.0
Q ss_pred CCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 39 ~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
.+|+++||.|| ++||++|....|.+.++.+++.. .+.++.|..+.. .++++.|
T Consensus 112 ~~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~-------------------------~~l~~~~ 164 (210)
T 3apq_A 112 NSGELWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDD-------------------------RMLCRMK 164 (210)
T ss_dssp HHSCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-------------------------HHHHHHT
T ss_pred ccCCcEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCcc-------------------------HHHHHHc
Confidence 46789999998 88999999999999999998864 488888886542 3567778
Q ss_pred CCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
++. ..|+++++ ++|+++..+.+ ....+++.+.|+++..
T Consensus 165 ~v~-----~~Pt~~~~-~~G~~~~~~~G----~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 165 GVN-----SYPSLFIF-RSGMAAVKYNG----DRSKESLVAFAMQHVR 202 (210)
T ss_dssp TCC-----SSSEEEEE-CTTSCCEECCS----CCCHHHHHHHHHHHHH
T ss_pred CCC-----cCCeEEEE-ECCCceeEecC----CCCHHHHHHHHHHhCc
Confidence 886 56788888 89999877642 2456788888876643
No 175
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.08 E-value=3.9e-10 Score=76.57 Aligned_cols=90 Identities=10% Similarity=0.022 Sum_probs=63.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.|++++|+|| ++||++|+...|.+.++.+++. ..++.+..+...... ...++++.|+
T Consensus 28 ~~~~~~v~f~-a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~~~~~~-------------------~~~~~~~~~~ 84 (118)
T 1zma_A 28 KKETATFFIG-RKTCPYCRKFAGTLSGVVAETK---AHIYFINSEEPSQLN-------------------DLQAFRSRYG 84 (118)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTCGGGHH-------------------HHHHHHHHHT
T ss_pred CCCeEEEEEE-CCCCccHHHHHHHHHHHHHhcC---CeEEEEECCCcCcHH-------------------HHHHHHHHcC
Confidence 4688888888 8899999999999999988764 456666665432111 1235778888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILD 162 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~ 162 (181)
+. ..|+++++ ++|+++.++.+. ...+++.+.|+
T Consensus 85 i~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~ 117 (118)
T 1zma_A 85 IP-----TVPGFVHI-TDGQINVRCDSS----MSAQEIKDFAG 117 (118)
T ss_dssp CC-----SSCEEEEE-ETTEEEEECCTT----CCHHHHHHHHT
T ss_pred CC-----CCCeEEEE-ECCEEEEEecCC----CCHHHHHHHhh
Confidence 87 56798888 499998776321 34566666654
No 176
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.08 E-value=9.6e-10 Score=76.92 Aligned_cols=89 Identities=12% Similarity=0.144 Sum_probs=67.6
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
++.++|+|| +.||+.|....+.|.++.+++.. ++.++.|+.+. +.++++.|++
T Consensus 50 ~~~vvv~f~-~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~v 102 (140)
T 1v98_A 50 APLTLVDFF-APWCGPCRLVSPILEELARDHAG-RLKVVKVNVDE-------------------------HPGLAARYGV 102 (140)
T ss_dssp CCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT-------------------------CHHHHHHTTC
T ss_pred CCCEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCC-------------------------CHHHHHHCCC
Confidence 334777777 88999999999999999998875 48888888764 2357778888
Q ss_pred CCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 121 RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 121 ~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
. ..|+++++ ++|+++..+.+. ...+++.+.|+++..
T Consensus 103 ~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 103 R-----SVPTLVLF-RRGAPVATWVGA----SPRRVLEERLRPYLE 138 (140)
T ss_dssp C-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHHT
T ss_pred C-----ccCEEEEE-eCCcEEEEEeCC----CCHHHHHHHHHHHHc
Confidence 6 56788888 799999877532 346777777776543
No 177
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.07 E-value=3.7e-10 Score=76.78 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=68.4
Q ss_pred eeeecC-CCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh----cCcEEEEEecCCHHHHHHHHHHcCCCcccceeE
Q psy2878 32 KVITES-SFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE----RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQ 106 (181)
Q Consensus 32 ~~~~l~-~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~----~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~ 106 (181)
+.+... ..++++++|.|| ++||++|+...|.+.++.+++.. .++.++.|..+.. .
T Consensus 15 ~~f~~~v~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~--------------~----- 74 (121)
T 2djj_A 15 KNYNEIVLDDTKDVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN--------------D----- 74 (121)
T ss_dssp TTTTTSSSCTTSCEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS--------------C-----
T ss_pred cCHHHHhhcCCCCEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc--------------c-----
Confidence 444433 236789999998 88999999999999999999986 2688888876531 1
Q ss_pred EEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcE-EEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 107 FSDTNGSLIDQLGIRHETGVALRATFIFDPQNII-QHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 107 ~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i-~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+++ ++. ..|+++++++.|++ +..+.+ ....+++.+.|+++.
T Consensus 75 -------~~~--~v~-----~~Pt~~~~~~~~~~~~~~~~G----~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 75 -------VPD--EIQ-----GFPTIKLYPAGAKGQPVTYSG----SRTVEDLIKFIAENG 116 (121)
T ss_dssp -------CSS--CCS-----SSSEEEEECSSCTTSCCCCCC----CSCHHHHHHHHHHTS
T ss_pred -------ccc--ccC-----cCCeEEEEeCcCCCCceEecC----CCCHHHHHHHHHhcc
Confidence 111 555 56799999988884 434421 246788888887664
No 178
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.07 E-value=5.2e-10 Score=76.97 Aligned_cols=88 Identities=14% Similarity=0.212 Sum_probs=64.9
Q ss_pred CCCeEEEEEeeCCCCC--------------CChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCccccee
Q psy2878 40 PGKWKIFYFYPKDFTF--------------VCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHW 105 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp--------------~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~ 105 (181)
.||+++|.|| ++||+ +|+...|.+.++.+++++ ++.++.|+.|.
T Consensus 20 ~~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~-------------------- 77 (123)
T 1oaz_A 20 ADGAILVDFW-AEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ-------------------- 77 (123)
T ss_dssp CSSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS--------------------
T ss_pred CCCeEEEEEE-CCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCC--------------------
Confidence 4789999998 88999 999999999999988875 48888888663
Q ss_pred EEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 106 QFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 106 ~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+.++++.|++. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 78 -----~~~l~~~~~v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 78 -----NPGTAPKYGIR-----GIPTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 121 (123)
T ss_dssp -----CTTTGGGGTCC-----BSSEEEEE-ESSSEEEEEESC----CCHHHHHHHHTTT
T ss_pred -----CHHHHHHcCCC-----ccCEEEEE-ECCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 24677889987 67899999 899999887532 3467788877654
No 179
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.07 E-value=2e-10 Score=77.52 Aligned_cols=91 Identities=18% Similarity=0.247 Sum_probs=68.2
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhc--CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNER--NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~--~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
++|+++|.|| +.||+.|....+.+.++.+++++. ++.++.|..+. +..+++.
T Consensus 23 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------------------------~~~~~~~ 76 (120)
T 1mek_A 23 AHKYLLVEFY-APWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-------------------------ESDLAQQ 76 (120)
T ss_dssp HCSEEEEEEE-CSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-------------------------CCSSHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-------------------------CHHHHHH
Confidence 5688888888 889999999999999999988764 35555555432 3467888
Q ss_pred hCCCCCCCcceeeEEEEcCCCcEE--EEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 118 LGIRHETGVALRATFIFDPQNIIQ--HITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~i~--~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
|++. ..|+++++ ++|+++ ..+.+ ....+++.+.|+++..
T Consensus 77 ~~v~-----~~Pt~~~~-~~g~~~~~~~~~g----~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 77 YGVR-----GYPTIKFF-RNGDTASPKEYTA----GREADDIVNWLKKRTG 117 (120)
T ss_dssp HTCC-----SSSEEEEE-ESSCSSSCEECCC----CSSHHHHHHHHHTTSC
T ss_pred CCCC-----cccEEEEE-eCCCcCCcccccC----ccCHHHHHHHHHhccC
Confidence 9987 57899999 688876 55422 3467888888887643
No 180
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.06 E-value=6.9e-10 Score=78.36 Aligned_cols=93 Identities=10% Similarity=0.070 Sum_probs=67.7
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+++++|.|| ++||++|+.+.|.|.++.++++. ++.++.|..|.. .++++.|+
T Consensus 22 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-------------------------~~~~~~~~ 74 (142)
T 1qgv_A 22 EDRVVVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV-------------------------PDFNKMYE 74 (142)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-------------------------CTTTTSSC
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC-------------------------HHHHHHcC
Confidence 4789999998 89999999999999999999864 488888887631 24567788
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccC------CCCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNL------NVGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~------~~~~~~~~ll~~l~~l~ 165 (181)
+. ..|+++++ ++|+++....+.. ....+.+++.+.|+++.
T Consensus 75 i~-----~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 75 LY-----DPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp SC-----SSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred CC-----CCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 76 56788888 4899887653211 11123667777776654
No 181
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.06 E-value=4.6e-10 Score=74.89 Aligned_cols=87 Identities=11% Similarity=0.124 Sum_probs=65.9
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhc--CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNER--NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~--~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
+++++|.|| +.||+.|+...+.+.++.+++... ++.++.|..+. +.++++.|
T Consensus 21 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------------------------~~~l~~~~ 74 (111)
T 3uvt_A 21 EGITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA-------------------------ERNICSKY 74 (111)
T ss_dssp SSEEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT-------------------------CHHHHHHT
T ss_pred CCcEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc-------------------------cHhHHHhc
Confidence 678888888 889999999999999998876543 57777777653 23467788
Q ss_pred CCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHh
Q psy2878 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDA 163 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~ 163 (181)
++. ..|+.+++ ++|+++..+.+. ...+++.+.|++
T Consensus 75 ~v~-----~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~ 109 (111)
T 3uvt_A 75 SVR-----GYPTLLLF-RGGKKVSEHSGG----RDLDSLHRFVLS 109 (111)
T ss_dssp TCC-----SSSEEEEE-ETTEEEEEECSC----CSHHHHHHHHHH
T ss_pred CCC-----cccEEEEE-eCCcEEEeccCC----cCHHHHHHHHHh
Confidence 886 56787777 799998877422 467788887765
No 182
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.04 E-value=1.3e-09 Score=74.91 Aligned_cols=90 Identities=7% Similarity=0.029 Sum_probs=67.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh----cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHH
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE----RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLI 115 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~----~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 115 (181)
.+++++|.|| ++||++|+...|.+.++.+++.. .++.++.|..+. +.+++
T Consensus 32 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~-------------------------~~~l~ 85 (127)
T 3h79_A 32 PEKDVFVLYY-VPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK-------------------------YPDVI 85 (127)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT-------------------------CHHHH
T ss_pred CCCCEEEEEE-CCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc-------------------------cHhHH
Confidence 3688999988 89999999999999999988864 246777766542 34678
Q ss_pred HHhCCCCCCCcceeeEEEEcCCCcEE-EEEeccCCCCCCHHHHHHHHHhh
Q psy2878 116 DQLGIRHETGVALRATFIFDPQNIIQ-HITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 116 ~~~gv~~~~g~~~p~~~liD~~g~i~-~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+.|++. ..|+++++++.+++. ..+. -..+.+++.+.|+++
T Consensus 86 ~~~~v~-----~~Pt~~~~~~g~~~~~~~~~----G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 86 ERMRVS-----GFPTMRYYTRIDKQEPFEYS----GQRYLSLVDSFVFQN 126 (127)
T ss_dssp HHTTCC-----SSSEEEEECSSCSSSCEECC----SCCCHHHHHHHHHHH
T ss_pred HhcCCc-----cCCEEEEEeCCCCCCceEec----CCccHHHHHHHHHhc
Confidence 889987 567999998777653 2231 135788888888764
No 183
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.00 E-value=8.7e-10 Score=75.68 Aligned_cols=95 Identities=13% Similarity=0.177 Sum_probs=69.3
Q ss_pred CCCCCCeEEEEEeeCC-------CCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEc
Q psy2878 37 SSFPGKWKIFYFYPKD-------FTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSD 109 (181)
Q Consensus 37 ~~~~gk~~ll~F~~~~-------~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D 109 (181)
.+.+|++++|.|| ++ ||++|+...|.|.++.+++.+ ++.++.|..+... .| .|
T Consensus 20 ~~~~~~~v~v~F~-a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~---~~---------------~d 79 (123)
T 1wou_A 20 EQHNGKTIFAYFT-GSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKP---YW---------------KD 79 (123)
T ss_dssp HTTTTSEEEEEEE-CCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHH---HH---------------HC
T ss_pred HHhCCCEEEEEEE-ccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCch---hh---------------hc
Confidence 3445899999998 88 999999999999999887764 6899999987632 11 24
Q ss_pred CCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q psy2878 110 TNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILD 162 (181)
Q Consensus 110 ~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~ 162 (181)
.+..+++.|++. ..|+++++++.+++.... ..+.+++.+.|+
T Consensus 80 ~~~~~~~~~~i~-----~~Pt~~~~~~~~~~~g~~------~~~~~~l~~~i~ 121 (123)
T 1wou_A 80 PNNDFRKNLKVT-----AVPTLLKYGTPQKLVESE------CLQANLVEMLFS 121 (123)
T ss_dssp TTCHHHHHHCCC-----SSSEEEETTSSCEEEGGG------GGCHHHHHHHHH
T ss_pred hhHHHHHHCCCC-----eeCEEEEEcCCceEeccc------cCCHHHHHHHHh
Confidence 567888999987 678999998744443221 234556666554
No 184
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.00 E-value=7.7e-10 Score=83.86 Aligned_cols=91 Identities=11% Similarity=0.170 Sum_probs=69.1
Q ss_pred CCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcC--cEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERN--AILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 39 ~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~--~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
.+||+++|.|| ++||++|+...|.+.++.++++..+ +.++.|..+. +.++++
T Consensus 30 ~~~~~v~v~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~-------------------------~~~l~~ 83 (241)
T 3idv_A 30 ADKDTVLLEFY-APWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS-------------------------ASVLAS 83 (241)
T ss_dssp TTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT-------------------------CHHHHH
T ss_pred hcCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC-------------------------CHHHHH
Confidence 36889999998 8999999999999999999998765 7777776642 346788
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
.|++. ..|++++++ +|+++. +.+ ....+++.+.+++...
T Consensus 84 ~~~v~-----~~Pt~~~~~-~g~~~~-~~g----~~~~~~l~~~i~~~~~ 122 (241)
T 3idv_A 84 RFDVS-----GYPTIKILK-KGQAVD-YEG----SRTQEEIVAKVREVSQ 122 (241)
T ss_dssp HTTCC-----SSSEEEEEE-TTEEEE-CCS----CSCHHHHHHHHHHHHS
T ss_pred hcCCC-----cCCEEEEEc-CCCccc-ccC----cccHHHHHHHHhhccC
Confidence 89987 567888885 677663 321 3566777777776543
No 185
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.00 E-value=1.4e-09 Score=79.51 Aligned_cols=108 Identities=10% Similarity=0.003 Sum_probs=68.3
Q ss_pred eeeecCCCCCCeEEEEEeeCCCCCCChhHHHH---HHHHHHHHHhcCcEEEEEecCCH-HHHHHHHHHcCCCcccceeEE
Q psy2878 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISE---YNKLVKDFNERNAILLGGSSDNE-FVKLAWRRENSNLYKLNHWQF 107 (181)
Q Consensus 32 ~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~---l~~l~~~~~~~~~~vi~Is~d~~-~~~~~~~~~~~~~~~~~~~~~ 107 (181)
+.+..+..+||+++|.|| ++||+.|+.+.+. ..++.+.+.+ ++.++.|..+.. +....|..
T Consensus 30 ea~~~A~~~~KpVlvdF~-A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~------------- 94 (173)
T 3ira_A 30 EAFEKARKENKPVFLSIG-YSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMT------------- 94 (173)
T ss_dssp HHHHHHHHHTCCEEEEEE-CTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHH-------------
T ss_pred HHHHHHHHhCCCEEEecc-cchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHH-------------
Confidence 455566667899999999 8999999987763 2445555544 577777776642 22222221
Q ss_pred EcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCC----CCCCHHHHHHHHHhh
Q psy2878 108 SDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLN----VGRNPIETLRILDAI 164 (181)
Q Consensus 108 ~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~----~~~~~~~ll~~l~~l 164 (181)
.+...+|+. .+|+++++|++|++++...+-.. ......++++.+.++
T Consensus 95 -----~~q~~~gv~-----g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~ 145 (173)
T 3ira_A 95 -----VCQIILGRG-----GWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEI 145 (173)
T ss_dssp -----HHHHHHSCC-----CSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHHH
T ss_pred -----HHHHHcCCC-----CCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHHH
Confidence 122235765 56799999999999987532111 123466666666543
No 186
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=4.8e-09 Score=73.08 Aligned_cols=81 Identities=10% Similarity=0.023 Sum_probs=58.8
Q ss_pred CCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 39 ~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
.++++++|+|| ++||++|+...|.+.++.+++...++.++.|..+... ++++.|
T Consensus 24 ~~~~~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~-------------------------~~~~~~ 77 (137)
T 2dj0_A 24 DKRVTWIVEFF-ANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT-------------------------DVSTRY 77 (137)
T ss_dssp STTSCEEEEEC-CTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH-------------------------HHHHHT
T ss_pred CCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH-------------------------HHHHHc
Confidence 35568999998 8999999999999999999997667888888776422 233444
Q ss_pred CCCCCCC-cceeeEEEEcCCCcEEEEEec
Q psy2878 119 GIRHETG-VALRATFIFDPQNIIQHITVN 146 (181)
Q Consensus 119 gv~~~~g-~~~p~~~liD~~g~i~~~~~~ 146 (181)
++....+ ...|+++++ ++|+++.++.+
T Consensus 78 ~v~~~~~~~~~Pt~~~~-~~G~~~~~~~G 105 (137)
T 2dj0_A 78 KVSTSPLTKQLPTLILF-QGGKEAMRRPQ 105 (137)
T ss_dssp TCCCCSSSSCSSEEEEE-SSSSEEEEESC
T ss_pred cCcccCCcCCCCEEEEE-ECCEEEEEecC
Confidence 4420000 135788888 79999988754
No 187
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.53 E-value=5.4e-11 Score=78.56 Aligned_cols=73 Identities=18% Similarity=0.278 Sum_probs=56.9
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+|+++|+|| +.||+.|....+.+.++.+++.. ++.++.|+.+. +.++++.|+
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------------------------~~~~~~~~~ 70 (106)
T 2yj7_A 18 SDKPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE-------------------------NPNTAAQYG 70 (106)
Confidence 4678888888 88999999999999999988875 47777766543 234666778
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEe
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITV 145 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~ 145 (181)
+. ..|+++++ ++|+++..+.
T Consensus 71 v~-----~~Pt~~~~-~~g~~~~~~~ 90 (106)
T 2yj7_A 71 IR-----SIPTLLLF-KNGQVVDRLV 90 (106)
Confidence 76 56788888 7999987774
No 188
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.95 E-value=3.7e-10 Score=77.64 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=64.7
Q ss_pred CCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 39 ~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
..+|+++|+|| +.||+.|....+.|.++.+++. ++.++.|+.+. +.++++.|
T Consensus 34 ~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------------------------~~~~~~~~ 85 (130)
T 1wmj_A 34 EAGKVVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE-------------------------LKEVAEKY 85 (130)
T ss_dssp TTTCBCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT-------------------------SGGGHHHH
T ss_pred hcCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc-------------------------hHHHHHHc
Confidence 35888988888 8999999999999999988876 68888877642 34678889
Q ss_pred CCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
++. ..|+.+++ ++|+++..+.+ . ..+++.+.|+++.
T Consensus 86 ~v~-----~~Pt~~~~-~~g~~~~~~~g-~----~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 86 NVE-----AMPTFLFI-KDGAEADKVVG-A----RKDDLQNTIVKHV 121 (130)
T ss_dssp TCC-----SSCCCCBC-TTTTCCBCCCT-T----CTTTHHHHHHHHT
T ss_pred CCC-----ccceEEEE-eCCeEEEEEeC-C----CHHHHHHHHHHHH
Confidence 986 56676555 89999877632 1 2345555555444
No 189
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.93 E-value=5.9e-09 Score=66.16 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=58.2
Q ss_pred EEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCC
Q psy2878 44 KIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE 123 (181)
Q Consensus 44 ~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~ 123 (181)
.++.|| +.||+.|....+.+.++.+++.+ ++.++.|..+. +.++++.||+.
T Consensus 4 ~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------------------------~~~~~~~~~v~-- 54 (85)
T 1nho_A 4 NIEVFT-SPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMV-------------------------DREKAIEYGLM-- 54 (85)
T ss_dssp CEEEES-CSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTT-------------------------CGGGGGGTCSS--
T ss_pred EEEEEE-CCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCC-------------------------CHHHHHhCCce--
Confidence 467777 89999999999999999988864 58888888752 23567788886
Q ss_pred CCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 124 TGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 124 ~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
..|++++ +|++ .+.+. .+.+++.+.|+++
T Consensus 55 ---~~Pt~~~---~G~~--~~~G~----~~~~~l~~~l~~~ 83 (85)
T 1nho_A 55 ---AVPAIAI---NGVV--RFVGA----PSREELFEAINDE 83 (85)
T ss_dssp ---CSSEEEE---TTTE--EEECS----SCCHHHHHHHHHH
T ss_pred ---eeCEEEE---CCEE--EEccC----CCHHHHHHHHHHH
Confidence 5678777 8998 33221 2446677766654
No 190
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.92 E-value=3.6e-10 Score=80.84 Aligned_cols=96 Identities=5% Similarity=-0.093 Sum_probs=61.6
Q ss_pred CCCCCCeEEEEEeeCCCCCCChhHHHHHHHHH--HHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchH
Q psy2878 37 SSFPGKWKIFYFYPKDFTFVCPTEISEYNKLV--KDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSL 114 (181)
Q Consensus 37 ~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~--~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 114 (181)
+...||+++|.|| ++||++|+...+.+.+.- .++.+ ..++.|..|... ..+
T Consensus 40 A~~~~KpVlV~F~-A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e~------------------------~~~ 92 (151)
T 3ph9_A 40 AQKSKKPLMVIHH-LEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHET------------------------TDK 92 (151)
T ss_dssp HHHHTCCEEEEEC-CTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSCC------------------------SCG
T ss_pred HHHcCCcEEEEEE-CCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCCc------------------------hhh
Confidence 3346899999999 999999999998887642 22222 345566665210 001
Q ss_pred HHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCC------CCCHHHHHHHHHhh
Q psy2878 115 IDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNV------GRNPIETLRILDAI 164 (181)
Q Consensus 115 ~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~------~~~~~~ll~~l~~l 164 (181)
+..|++. ..|+++++|++|+++....+.... ..+.+++++.+++.
T Consensus 93 ~~~~~v~-----~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 93 NLSPDGQ-----YVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp GGCTTCC-----CSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred HhhcCCC-----CCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 2345544 567999999999999887643111 23466777776654
No 191
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.91 E-value=5.3e-09 Score=66.36 Aligned_cols=82 Identities=13% Similarity=0.098 Sum_probs=58.5
Q ss_pred CeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 42 KWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 42 k~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
.++++.|| +.|||.|....+.+.++.+++.+ ++.++.|+.+. +.++++.||+.
T Consensus 3 ~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------------------------~~~~~~~~~v~ 55 (85)
T 1fo5_A 3 KVKIELFT-SPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVME-------------------------NPQKAMEYGIM 55 (85)
T ss_dssp CEEEEEEE-CCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSS-------------------------SCCTTTSTTTC
T ss_pred ceEEEEEe-CCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCC-------------------------CHHHHHHCCCc
Confidence 45677777 89999999999999999888763 68888888753 23566778876
Q ss_pred CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 122 HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 122 ~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
..|++++ +|++ .+.+ . .+.+++.+.|+++
T Consensus 56 -----~~Pt~~~---~G~~--~~~G-~---~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 56 -----AVPTIVI---NGDV--EFIG-A---PTKEALVEAIKKR 84 (85)
T ss_dssp -----CSSEEEE---TTEE--ECCS-S---SSSHHHHHHHHHH
T ss_pred -----ccCEEEE---CCEE--eeec-C---CCHHHHHHHHHHh
Confidence 5677777 8988 3322 1 2456677766643
No 192
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.91 E-value=3.9e-09 Score=74.00 Aligned_cols=87 Identities=10% Similarity=0.132 Sum_probs=65.6
Q ss_pred CeEEEEEeeCCCC--CCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 42 KWKIFYFYPKDFT--FVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 42 k~~ll~F~~~~~c--p~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+++||.|| +.|| ++|+...|.|.++.++|.. .+.++-|..|. +.+++.+||
T Consensus 34 ~~vlVdF~-A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe-------------------------~~~la~~yg 86 (137)
T 2qsi_A 34 KIVVLFFR-GDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEA-------------------------ERGLMARFG 86 (137)
T ss_dssp SEEEEEEC-CCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGG-------------------------HHHHHHHHT
T ss_pred CcEEEEEe-CCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCC-------------------------CHHHHHHcC
Confidence 48888888 7799 9999999999999999864 47777777664 246777899
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+. +.|+.+++ ++|+++.+..+. ..-+++.+.|+++.
T Consensus 87 V~-----siPTlilF-kdG~~v~~~vG~----~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 87 VA-----VCPSLAVV-QPERTLGVIAKI----QDWSSYLAQIGAML 122 (137)
T ss_dssp CC-----SSSEEEEE-ECCEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred Cc-----cCCEEEEE-ECCEEEEEEeCC----CCHHHHHHHHHHHh
Confidence 97 67899888 799999999642 22345555554443
No 193
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.90 E-value=6.4e-09 Score=88.06 Aligned_cols=92 Identities=11% Similarity=0.048 Sum_probs=72.7
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh--cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE--RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~--~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
+++++|.|| ++||++|+.++|.+.++++++.+ .++.++.|+.+. |.+.++++.|
T Consensus 30 ~k~vlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~-----------------------d~~~~l~~~~ 85 (519)
T 3t58_A 30 SSAWAVEFF-ASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE-----------------------ETNSAVCREF 85 (519)
T ss_dssp SSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS-----------------------GGGHHHHHHT
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc-----------------------cccHHHHHHc
Confidence 588999998 89999999999999999999986 368888888764 2245788899
Q ss_pred CCCCCCCcceeeEEEEcC---CCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 119 GIRHETGVALRATFIFDP---QNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~---~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
++. ..|+++++++ +|+++....+. .+.+++.+.|+++.
T Consensus 86 ~V~-----~~PTl~~f~~g~~~G~~~~~~~g~----~~~~~L~~~l~~~l 126 (519)
T 3t58_A 86 NIA-----GFPTVRFFQAFTKNGSGATLPGAG----ANVQTLRMRLIDAL 126 (519)
T ss_dssp TCC-----SBSEEEEECTTCCSCCCEEECCSS----CCHHHHHHHHHHHH
T ss_pred CCc-----ccCEEEEEcCcccCCCceeEecCC----CCHHHHHHHHHHHH
Confidence 987 6789999997 77766655322 56777777776554
No 194
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.90 E-value=2e-08 Score=75.51 Aligned_cols=88 Identities=13% Similarity=-0.010 Sum_probs=65.0
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh---cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE---RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~---~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
++.++|.|| ++||++|+...|.+.++.+++.+ .++.++.|..+. +.++++.
T Consensus 134 ~~~~~v~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-------------------------~~~l~~~ 187 (226)
T 1a8l_A 134 QDVRILVFV-TPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-------------------------YPEWADQ 187 (226)
T ss_dssp SCEEEEEEE-CSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-------------------------CHHHHHH
T ss_pred CCcEEEEEe-CCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-------------------------CHHHHHh
Confidence 344478887 99999999999999999999984 368888887652 3457788
Q ss_pred hCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 118 LGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
|++. ..|+++++ ++|+++..+.+. ...+++.+.|+++
T Consensus 188 ~~v~-----~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 188 YNVM-----AVPKIVIQ-VNGEDRVEFEGA----YPEKMFLEKLLSA 224 (226)
T ss_dssp TTCC-----SSCEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CCCc-----ccCeEEEE-eCCceeEEEcCC----CCHHHHHHHHHHh
Confidence 9987 56786666 699988777432 3456677777654
No 195
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.90 E-value=3.2e-09 Score=74.10 Aligned_cols=89 Identities=11% Similarity=0.214 Sum_probs=65.8
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+||++||+|| ++||++|....|.|.++.+++. ++.++.|..+... +.|+
T Consensus 29 ~~~~vvv~f~-a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~----------------------------~~~~ 77 (135)
T 2dbc_A 29 KDLWVVIHLY-RSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCI----------------------------EHYH 77 (135)
T ss_dssp SSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSC----------------------------SSCC
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCc----------------------------ccCC
Confidence 3578999998 8999999999999999988874 5788888766420 3567
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCC---CCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNV---GRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~---~~~~~~ll~~l~~l~ 165 (181)
+. ..|+.++++ +|+++.++.+.... ....+++.+.|++..
T Consensus 78 i~-----~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 78 DN-----CLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp SS-----CCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred CC-----CCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 65 567888886 99999888643222 125677777777654
No 196
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.89 E-value=7.3e-09 Score=74.13 Aligned_cols=69 Identities=10% Similarity=0.044 Sum_probs=55.6
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
.+++||.|| ++||++|+...|.|.++.+++.+ .+.|+-|.+|. ..+++..|++
T Consensus 41 ~k~VVVdF~-A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe-------------------------~~e~a~~y~V 93 (160)
T 2av4_A 41 ERLVCIRFG-HDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITE-------------------------VPDFNTMYEL 93 (160)
T ss_dssp SSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTT-------------------------CCTTTTTTTC
T ss_pred CCEEEEEEE-CCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCC-------------------------CHHHHHHcCC
Confidence 478999998 99999999999999999999864 37787777764 2456778888
Q ss_pred CCCCCcceeeEEEEcCCCcEEE
Q psy2878 121 RHETGVALRATFIFDPQNIIQH 142 (181)
Q Consensus 121 ~~~~g~~~p~~~liD~~g~i~~ 142 (181)
. ..|+.+++ ++|+.+.
T Consensus 94 ~-----siPT~~fF-k~G~~v~ 109 (160)
T 2av4_A 94 Y-----DPVSVMFF-YRNKHMM 109 (160)
T ss_dssp C-----SSEEEEEE-ETTEEEE
T ss_pred C-----CCCEEEEE-ECCEEEE
Confidence 7 66788777 6888874
No 197
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.88 E-value=5e-09 Score=73.74 Aligned_cols=90 Identities=11% Similarity=0.106 Sum_probs=66.8
Q ss_pred CCCeEEEEEeeCCC--CCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 40 PGKWKIFYFYPKDF--TFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 40 ~gk~~ll~F~~~~~--cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
.++++||+|| +.| |++|+...|.|.++.++|..+.+.|+-|.+|. +.+++.+
T Consensus 33 ~~~~vlVdF~-a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe-------------------------~~~lA~~ 86 (140)
T 2qgv_A 33 QAPDGVVLLS-SDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ-------------------------SEAIGDR 86 (140)
T ss_dssp TCSSEEEEEC-CCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH-------------------------HHHHHHH
T ss_pred CCCCEEEEEe-CCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC-------------------------CHHHHHH
Confidence 4567888776 777 99999999999999999875337777666553 2467788
Q ss_pred hCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 118 LGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
||+. +.|+.+++ ++|+++.+..+. ..-+++.+.|+++.
T Consensus 87 ygV~-----sIPTlilF-k~G~~v~~~~G~----~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 87 FGAF-----RFPATLVF-TGGNYRGVLNGI----HPWAELINLMRGLV 124 (140)
T ss_dssp HTCC-----SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred cCCc-----cCCEEEEE-ECCEEEEEEecC----CCHHHHHHHHHHHh
Confidence 9998 67788888 799999998642 23456666666554
No 198
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.85 E-value=9.9e-09 Score=78.40 Aligned_cols=91 Identities=12% Similarity=0.112 Sum_probs=68.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh--cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE--RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~--~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
.+++++|.|| ++||++|+...|.+.++++++.+ .++.++.|+.+. |.+.++++.
T Consensus 29 ~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~-----------------------~~~~~l~~~ 84 (244)
T 3q6o_A 29 SRSAWAVEFF-ASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE-----------------------ETNSAVCRD 84 (244)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS-----------------------TTTHHHHHH
T ss_pred CCCeEEEEEE-CCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc-----------------------hhhHHHHHH
Confidence 3588989988 89999999999999999999986 468888888653 124678888
Q ss_pred hCCCCCCCcceeeEEEEcCCC-----cEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 118 LGIRHETGVALRATFIFDPQN-----IIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g-----~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
|++. ..|+.+++++.+ +.+ .. .+.+.+++.+.|.++.
T Consensus 85 ~~v~-----~~Pt~~~~~~g~~~~~g~~~-~~-----~g~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 85 FNIP-----GFPTVRFFXAFTXNGSGAVF-PV-----AGADVQTLRERLIDAL 126 (244)
T ss_dssp TTCC-----SSSEEEEECTTCCSSSCEEC-CC-----TTCCHHHHHHHHHHHH
T ss_pred cCCC-----ccCEEEEEeCCCcCCCCeeE-ec-----CCCCHHHHHHHHHHHH
Confidence 9987 678999998633 332 11 1246777777776553
No 199
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.85 E-value=5e-09 Score=74.04 Aligned_cols=86 Identities=14% Similarity=0.162 Sum_probs=56.7
Q ss_pred CeEEEEEeeCCC--CCCChhHHHHHHHHHHHHHhcCcE--EEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 42 KWKIFYFYPKDF--TFVCPTEISEYNKLVKDFNERNAI--LLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 42 k~~ll~F~~~~~--cp~C~~~~~~l~~l~~~~~~~~~~--vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
+.+||+|+ +.| |++|+...|.|.++.+++ . ++. ++.|+.|. +.++++.
T Consensus 35 ~~~vv~f~-~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~-------------------------~~~la~~ 86 (142)
T 2es7_A 35 GDGVILLS-SDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQ-------------------------SEAIGDR 86 (142)
T ss_dssp CSEEEEEC-CCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHH-------------------------HHHHHHT
T ss_pred CCEEEEEE-CCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCC-------------------------CHHHHHh
Confidence 44666666 545 999999999999999988 3 577 88887652 2357788
Q ss_pred hCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 118 LGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
|++. ..|+++++ ++|+++.++.+. ...+++.+.|+++.
T Consensus 87 ~~V~-----~iPT~~~f-k~G~~v~~~~G~----~~~~~l~~~i~~~l 124 (142)
T 2es7_A 87 FNVR-----RFPATLVF-TDGKLRGALSGI----HPWAELLTLMRSIV 124 (142)
T ss_dssp TTCC-----SSSEEEEE-SCC----CEESC----CCHHHHHHHHHHHH
T ss_pred cCCC-----cCCeEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHHh
Confidence 9987 67899999 899999887532 34567777776654
No 200
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.82 E-value=1.8e-08 Score=68.10 Aligned_cols=75 Identities=9% Similarity=0.063 Sum_probs=59.8
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
+++++|+|+ ++||++|....+.|.++.++ .++.++-|.+|....+ ..+++..|||
T Consensus 24 ~~~vvi~kh-atwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde~r~~---------------------Sn~IA~~~~V 78 (112)
T 3iv4_A 24 NKYVFVLKH-SETCPISANAYDQFNKFLYE---RDMDGYYLIVQQERDL---------------------SDYIAKKTNV 78 (112)
T ss_dssp CSEEEEEEE-CTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGGGHHH---------------------HHHHHHHHTC
T ss_pred CCCEEEEEE-CCcCHhHHHHHHHHHHHhcc---CCceEEEEEeecCchh---------------------hHHHHHHhCC
Confidence 678888887 99999999999999998873 4688888887753221 2467888998
Q ss_pred CCCCCcc-eeeEEEEcCCCcEEEEEec
Q psy2878 121 RHETGVA-LRATFIFDPQNIIQHITVN 146 (181)
Q Consensus 121 ~~~~g~~-~p~~~liD~~g~i~~~~~~ 146 (181)
. + .|+.+|+ ++|++++....
T Consensus 79 ~-----h~sPq~il~-k~G~~v~~~SH 99 (112)
T 3iv4_A 79 K-----HESPQAFYF-VNGEMVWNRDH 99 (112)
T ss_dssp C-----CCSSEEEEE-ETTEEEEEEEG
T ss_pred c-----cCCCeEEEE-ECCEEEEEeec
Confidence 7 5 6899999 79999999853
No 201
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.78 E-value=4.8e-08 Score=74.88 Aligned_cols=88 Identities=11% Similarity=0.105 Sum_probs=64.8
Q ss_pred CCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh---cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchH
Q psy2878 38 SFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE---RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSL 114 (181)
Q Consensus 38 ~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~---~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 114 (181)
++.|+.+++.|| +.||++|+...|.+.++..++.+ .++.+..|..+. +.++
T Consensus 135 ~~~~~~~vv~F~-a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~-------------------------~~~~ 188 (243)
T 2hls_A 135 SLKGRVHIETII-TPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE-------------------------NPDI 188 (243)
T ss_dssp HCCSCEEEEEEE-CSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT-------------------------CHHH
T ss_pred HcCCCcEEEEEE-CCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc-------------------------CHHH
Confidence 356777788887 89999999999999999999853 467777776542 2356
Q ss_pred HHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 115 IDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 115 ~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
++.|++. ..|++++ +|++++.. . ...+++++.|++..
T Consensus 189 ~~~~~V~-----~vPt~~i---~G~~~~~G--~----~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 189 ADKYGVM-----SVPSIAI---NGYLVFVG--V----PYEEDFLDYVKSAA 225 (243)
T ss_dssp HHHTTCC-----SSSEEEE---TTEEEEES--C----CCHHHHHHHHHHHH
T ss_pred HHHcCCe-----eeCeEEE---CCEEEEeC--C----CCHHHHHHHHHHHh
Confidence 7788887 5678877 78876222 2 45678888887654
No 202
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.76 E-value=3.4e-08 Score=78.00 Aligned_cols=96 Identities=14% Similarity=0.140 Sum_probs=69.4
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+++++|.|| +.||++|....|.+.++.+++... +.++.|..|.. .+.++++.|+
T Consensus 34 ~~~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~-----------------------~~~~l~~~~~ 88 (298)
T 3ed3_A 34 TNYTSLVEFY-APWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLN-----------------------KNKALCAKYD 88 (298)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTST-----------------------TTHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCc-----------------------cCHHHHHhCC
Confidence 4678999998 899999999999999999998753 88999988832 1457888899
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEec-------------cCCCCCCHHHHHHHHHhhcc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVN-------------NLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~-------------~~~~~~~~~~ll~~l~~l~~ 166 (181)
+. ..|+++++++ |+++....+ ...-.+..+.+++.+.+...
T Consensus 89 I~-----~~Pt~~~~~~-g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~ 142 (298)
T 3ed3_A 89 VN-----GFPTLMVFRP-PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR 142 (298)
T ss_dssp CC-----BSSEEEEEEC-CCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC
T ss_pred CC-----ccceEEEEEC-CceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc
Confidence 87 5679999974 553221110 11223678899988876653
No 203
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.74 E-value=1.9e-08 Score=77.40 Aligned_cols=91 Identities=10% Similarity=0.011 Sum_probs=67.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+|+++||.|| ++||++|....|.|.++.+++. ++.|+.|..+. . .+++.|+
T Consensus 132 ~~k~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~--------~------------------~l~~~~~ 182 (245)
T 1a0r_P 132 KITTIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN--------T------------------GAGDRFS 182 (245)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH--------H------------------CCTTSSC
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc--------H------------------HHHHHCC
Confidence 4788999998 8999999999999999999886 58888887642 0 1234567
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCC---CCCCHHHHHHHHHhhc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLN---VGRNPIETLRILDAIQ 165 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~---~~~~~~~ll~~l~~l~ 165 (181)
+. ..|+++++. +|+++..+++... .....+++...|.+..
T Consensus 183 I~-----~~PTll~~~-~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 183 SD-----VLPTLLVYK-GGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp TT-----TCSEEEEEE-TTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred CC-----CCCEEEEEE-CCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 65 567887775 9999988864322 2245677878887654
No 204
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.72 E-value=1.3e-07 Score=71.47 Aligned_cols=89 Identities=15% Similarity=0.183 Sum_probs=68.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcC--cEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERN--AILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~--~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
.+++++|.|| +.||++|+...|.+.++.+++..++ +.++.|..+. +.++++.
T Consensus 146 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~-------------------------~~~l~~~ 199 (241)
T 3idv_A 146 DADIILVEFY-APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA-------------------------ETDLAKR 199 (241)
T ss_dssp HCSEEEEEEE-CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT-------------------------CHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC-------------------------CHHHHHH
Confidence 4578888888 8999999999999999999998754 7777776653 2357788
Q ss_pred hCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 118 LGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
|++. ..|+.++++ +|+.+. +.+ ....+++++.|++..
T Consensus 200 ~~v~-----~~Pt~~~~~-~g~~~~-~~g----~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 200 FDVS-----GYPTLKIFR-KGRPYD-YNG----PREKYGIVDYMIEQS 236 (241)
T ss_dssp TTCC-----SSSEEEEEE-TTEEEE-CCS----CCSHHHHHHHHHHHT
T ss_pred cCCc-----ccCEEEEEE-CCeEEE-ecC----CCCHHHHHHHHHhhh
Confidence 9987 567888886 687765 311 357888888887654
No 205
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.71 E-value=1.1e-07 Score=59.23 Aligned_cols=61 Identities=15% Similarity=0.102 Sum_probs=46.2
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCC
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHET 124 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~ 124 (181)
.|.|| ++||++|+...+.+.++.+++.. ++.++.|. +.++++.||+.
T Consensus 3 ~v~f~-a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~----------------------------~~~~~~~~~v~--- 49 (77)
T 1ilo_A 3 KIQIY-GTGCANCQMLEKNAREAVKELGI-DAEFEKIK----------------------------EMDQILEAGLT--- 49 (77)
T ss_dssp EEEEE-CSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC----------------------------SHHHHHHHTCS---
T ss_pred EEEEE-cCCChhHHHHHHHHHHHHHHcCC-ceEEEEec----------------------------CHHHHHHCCCC---
Confidence 47777 67999999999999999887753 46666554 24677788887
Q ss_pred CcceeeEEEEcCCCcEEEE
Q psy2878 125 GVALRATFIFDPQNIIQHI 143 (181)
Q Consensus 125 g~~~p~~~liD~~g~i~~~ 143 (181)
..|++++ +|+++..
T Consensus 50 --~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 50 --ALPGLAV---DGELKIM 63 (77)
T ss_dssp --SSSCEEE---TTEEEEC
T ss_pred --cCCEEEE---CCEEEEc
Confidence 5677777 8998755
No 206
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.64 E-value=1.5e-09 Score=72.89 Aligned_cols=89 Identities=7% Similarity=-0.007 Sum_probs=59.5
Q ss_pred eeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCC
Q psy2878 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTN 111 (181)
Q Consensus 32 ~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~ 111 (181)
+.++|+++.||.+||.|| ++||++|....|.|.++.+++. .+-+..+.. .+.+
T Consensus 3 ~~~~la~~~~k~~vV~F~-A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~---------------------~~~~ 55 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYG-AYWCPHCQDQKELFGAAFDQVP-----YVECSPNGP---------------------GTPQ 55 (106)
T ss_dssp HHHHHHHHHHHHTCEEEE-CTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCT---------------------TSCC
T ss_pred HhhHHHHhcCCCEEEEEE-CCCCHHHHHHHHHHHHHHHhCC-----EEEEecccc---------------------cchh
Confidence 557778888888888888 8999999999999988775442 233322211 0235
Q ss_pred chHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q psy2878 112 GSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILD 162 (181)
Q Consensus 112 ~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~ 162 (181)
.++++.|++. ..|+.++ +|+. +.+ ....+++.+.+.
T Consensus 56 ~~l~~~~~V~-----~~PT~~i---~G~~---~~G----~~~~~~l~~~~~ 91 (106)
T 3kp8_A 56 AQECTEAGIT-----SYPTWII---NGRT---YTG----VRSLEALAVASG 91 (106)
T ss_dssp CHHHHHTTCC-----SSSEEEE---TTEE---EES----CCCHHHHHHHHT
T ss_pred HHHHHHcCCe-----EeCEEEE---CCEE---ecC----CCCHHHHHHHhC
Confidence 7889999997 5567555 7874 221 245666666653
No 207
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.63 E-value=4.1e-08 Score=81.95 Aligned_cols=91 Identities=13% Similarity=0.217 Sum_probs=68.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhc-CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNER-NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~-~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
.||+++|.|| ++||++|+.++|.+.++.+++++. ++.++.|..+.. ++++.|
T Consensus 369 ~~k~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~--------------------------~~~~~~ 421 (481)
T 3f8u_A 369 ENKDVLIEFY-APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN--------------------------DVPSPY 421 (481)
T ss_dssp TTCEEEEEEE-CTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS--------------------------CCCTTC
T ss_pred CCCcEEEEEe-cCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch--------------------------hhHhhC
Confidence 4789999998 899999999999999999999875 566666665431 233567
Q ss_pred CCCCCCCcceeeEEEEcCCCcE-EEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 119 GIRHETGVALRATFIFDPQNII-QHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i-~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
++. ..|+++++++.|++ ...+.+ ....+++++.|++...
T Consensus 422 ~v~-----~~Pt~~~~~~~~~~~~~~~~G----~~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 422 EVR-----GFPTIYFSPANKKLNPKKYEG----GRELSDFISYLQREAT 461 (481)
T ss_dssp CCC-----SSSEEEEECTTCTTSCEECCS----CCSHHHHHHHHHHHCS
T ss_pred CCc-----ccCEEEEEeCCCeEeeeEeCC----CCCHHHHHHHHHHhcC
Confidence 776 56799999988874 333322 2678899999987754
No 208
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.61 E-value=2.6e-07 Score=75.10 Aligned_cols=91 Identities=9% Similarity=0.140 Sum_probs=69.0
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh-----cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchH
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE-----RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSL 114 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~-----~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 114 (181)
.+++++|.|| +.||++|....|.+.++.+++++ .++.++.|..+. +.++
T Consensus 21 ~~~~vlV~F~-a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~-------------------------~~~l 74 (382)
T 2r2j_A 21 NADVALVNFY-ADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ-------------------------HSDI 74 (382)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT-------------------------CHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc-------------------------cHHH
Confidence 4688888888 89999999999999999999963 247777777552 3578
Q ss_pred HHHhCCCCCCCcceeeEEEEcCCCcEEEE-EeccCCCCCCHHHHHHHHHhhcc
Q psy2878 115 IDQLGIRHETGVALRATFIFDPQNIIQHI-TVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 115 ~~~~gv~~~~g~~~p~~~liD~~g~i~~~-~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
++.|++. ..|+++++ ++|+++.+ +.+ ....+++.+.+++...
T Consensus 75 ~~~~~v~-----~~Pt~~~f-~~G~~~~~~~~G----~~~~~~l~~~i~~~~~ 117 (382)
T 2r2j_A 75 AQRYRIS-----KYPTLKLF-RNGMMMKREYRG----QRSVKALADYIRQQKS 117 (382)
T ss_dssp HHHTTCC-----EESEEEEE-ETTEEEEEECCS----CCSHHHHHHHHHHHHS
T ss_pred HHhcCCC-----cCCEEEEE-eCCcEeeeeecC----cchHHHHHHHHHHhcc
Confidence 8889987 56787776 58998764 322 3567888888876653
No 209
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.60 E-value=2.5e-07 Score=74.26 Aligned_cols=89 Identities=6% Similarity=0.028 Sum_probs=65.8
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHH-------HHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCc
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISE-------YNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNG 112 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~-------l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 112 (181)
.+++++|.|| ++||+ |...+|. +.++.++++..++.+..|..+. +.
T Consensus 27 ~~~~~lV~F~-a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~-------------------------~~ 79 (350)
T 1sji_A 27 KYDVLCLYYH-ESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK-------------------------EA 79 (350)
T ss_dssp TCSEEEEEEE-CCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT-------------------------TH
T ss_pred hCCeEEEEEE-CCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC-------------------------CH
Confidence 4678888888 99999 9888888 7777777766678888887654 24
Q ss_pred hHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 113 SLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 113 ~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
++++.|++. ..|+++++ ++|++. .+.+ ....+++.+.+++...
T Consensus 80 ~l~~~~~v~-----~~Pt~~~~-~~g~~~-~~~G----~~~~~~l~~~i~~~~~ 122 (350)
T 1sji_A 80 KLAKKLGFD-----EEGSLYVL-KGDRTI-EFDG----EFAADVLVEFLLDLIE 122 (350)
T ss_dssp HHHHHHTCC-----STTEEEEE-ETTEEE-EECS----CCCHHHHHHHHHTTSS
T ss_pred HHHHhcCCC-----ccceEEEE-ECCcEE-EecC----CCCHHHHHHHHHHhcC
Confidence 677889987 56788888 688843 3422 2567888888876654
No 210
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.57 E-value=8.6e-08 Score=72.35 Aligned_cols=90 Identities=9% Similarity=0.036 Sum_probs=65.0
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+|+++||.|| +.||++|....|.|.++.+++. ++.++.|..+ . ..+++.|+
T Consensus 119 ~~k~vvV~F~-a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-~-------------------------~~l~~~~~ 169 (217)
T 2trc_P 119 KVTTIVVNIY-EDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-N-------------------------TGAGDRFS 169 (217)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-H-------------------------HTCSTTSC
T ss_pred CCcEEEEEEE-CCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-c-------------------------HHHHHHCC
Confidence 4688999998 8999999999999999988884 6888888764 1 11334566
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCC---CCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLN---VGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~---~~~~~~~ll~~l~~l 164 (181)
+. ..|+++++ ++|+++..+.+... .....+++.+.|.+.
T Consensus 170 i~-----~~PTl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 170 SD-----VLPTLLVY-KGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp GG-----GCSEEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CC-----CCCEEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 65 56788888 49999988853222 123357777777654
No 211
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.56 E-value=2.1e-07 Score=78.17 Aligned_cols=91 Identities=15% Similarity=0.149 Sum_probs=70.6
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+++++|.|| +.||++|....|.+.++.+++...++.++.|..+. +..+++.||
T Consensus 30 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~-------------------------~~~l~~~~~ 83 (504)
T 2b5e_A 30 SHDLVLAEFF-APWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE-------------------------NQDLCMEHN 83 (504)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT-------------------------CHHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC-------------------------CHHHHHhcC
Confidence 4678888888 89999999999999999999987678998888553 245788899
Q ss_pred CCCCCCcceeeEEEEcCCCcE--EEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 120 IRHETGVALRATFIFDPQNII--QHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i--~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+. ..|+++++. +|+. +..+.+ ....+.+.+.+++...
T Consensus 84 v~-----~~Pt~~~~~-~g~~~~~~~~~G----~~~~~~l~~~l~~~~~ 122 (504)
T 2b5e_A 84 IP-----GFPSLKIFK-NSDVNNSIDYEG----PRTAEAIVQFMIKQSQ 122 (504)
T ss_dssp CC-----SSSEEEEEE-TTCTTCEEECCS----CCSHHHHHHHHHHHTS
T ss_pred CC-----cCCEEEEEe-CCccccceeecC----CCCHHHHHHHHHHhcC
Confidence 87 567888885 6775 544422 3677888888876654
No 212
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.52 E-value=4.7e-07 Score=68.10 Aligned_cols=83 Identities=13% Similarity=0.062 Sum_probs=57.6
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
++.+++.|| +.||++|+...+.+.++..++. ++.++.|..+. +.++++.|++
T Consensus 136 ~~~~~v~F~-a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~-------------------------~~~l~~~~~v 187 (229)
T 2ywm_A 136 IPIEIWVFV-TTSCGYCPSAAVMAWDFALAND--YITSKVIDASE-------------------------NQDLAEQFQV 187 (229)
T ss_dssp SCEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGG-------------------------CHHHHHHTTC
T ss_pred CCeEEEEEE-CCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCC-------------------------CHHHHHHcCC
Confidence 344466677 8999999999999999988873 68888777642 3457788998
Q ss_pred CCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 121 RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 121 ~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
. ..|++++ +|++ ..+.+. ...+++.+.|+++
T Consensus 188 ~-----~~Pt~~~---~G~~-~~~~G~----~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 188 V-----GVPKIVI---NKGV-AEFVGA----QPENAFLGYIMAV 218 (229)
T ss_dssp C-----SSSEEEE---GGGT-EEEESC----CCHHHHHHHHHHH
T ss_pred c-----ccCEEEE---CCEE-EEeeCC----CCHHHHHHHHHHH
Confidence 7 5678777 7884 334322 3445666666544
No 213
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.51 E-value=3.7e-07 Score=76.10 Aligned_cols=89 Identities=11% Similarity=0.060 Sum_probs=69.5
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
+++++|.|| +.||++|+...|.+.++.+++.+. +.++.|..+. +..+++.||+
T Consensus 21 ~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------------------------~~~l~~~~~v 73 (481)
T 3f8u_A 21 AGLMLVEFF-APWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA-------------------------NTNTCNKYGV 73 (481)
T ss_dssp SSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT-------------------------CHHHHHHTTC
T ss_pred CCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC-------------------------CHHHHHhcCC
Confidence 478888888 999999999999999999999865 7888887654 3467788998
Q ss_pred CCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 121 RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 121 ~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
. ..|+.+++ ++|+++..+.+ ....+++.+.+++...
T Consensus 74 ~-----~~Ptl~~~-~~g~~~~~~~G----~~~~~~l~~~~~~~~~ 109 (481)
T 3f8u_A 74 S-----GYPTLKIF-RDGEEAGAYDG----PRTADGIVSHLKKQAG 109 (481)
T ss_dssp C-----EESEEEEE-ETTEEEEECCS----CSSHHHHHHHHHHHTS
T ss_pred C-----CCCEEEEE-eCCceeeeecC----ccCHHHHHHHHHhhcc
Confidence 7 66777777 68987766632 2567888888876654
No 214
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.48 E-value=1.7e-07 Score=67.80 Aligned_cols=51 Identities=12% Similarity=0.067 Sum_probs=37.8
Q ss_pred eeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q psy2878 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS 83 (181)
Q Consensus 32 ~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~ 83 (181)
....+.+..++++|+.|| ..|||+|....+.|.++.+++.+.++.+..+..
T Consensus 13 ~~~~~G~~~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~~p~ 63 (175)
T 3gyk_A 13 NAPVLGNPEGDVTVVEFF-DYNCPYCRRAMAEVQGLVDADPNVRLVYREWPI 63 (175)
T ss_dssp TSCEEECTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred CCCCcCCCCCCEEEEEEE-CCCCccHHHHHHHHHHHHHhCCCEEEEEEeCCC
Confidence 445667777888888887 889999999999999998887643344444443
No 215
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.48 E-value=4.7e-07 Score=79.83 Aligned_cols=93 Identities=13% Similarity=0.114 Sum_probs=70.0
Q ss_pred cCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHH
Q psy2878 36 ESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLI 115 (181)
Q Consensus 36 l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 115 (181)
+.++.|++++|.|| ++||++|...+|.|.+++++++. ++.++.|..+.. ..++
T Consensus 450 ~~~~~~~~vlv~F~-a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-------------------------~~~~ 502 (780)
T 3apo_A 450 FPASDKEPWLVDFF-APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIH-------------------------EGLC 502 (780)
T ss_dssp SCTTCCSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-------------------------HHHH
T ss_pred HHHcCCCeEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCC-------------------------HHHH
Confidence 44457889999998 88999999999999999999975 588888887632 2367
Q ss_pred HHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 116 DQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 116 ~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+.||+. ..|++++++ +|++ +.+.+ ....+++.+.++++..
T Consensus 503 ~~~~v~-----~~Pt~~~~~-~g~~-~~~~g----~~~~~~l~~fi~~~~~ 542 (780)
T 3apo_A 503 NMYNIQ-----AYPTTVVFN-QSSI-HEYEG----HHSAEQILEFIEDLRN 542 (780)
T ss_dssp HHTTCC-----SSSEEEEEE-TTEE-EEECS----CSCHHHHHHHHHHHHS
T ss_pred HHcCCC-----cCCeEEEEc-CCce-eeecC----cccHHHHHHHHHhhcc
Confidence 788886 467999994 6876 44422 2456778777776654
No 216
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.47 E-value=1.2e-06 Score=62.47 Aligned_cols=91 Identities=13% Similarity=0.108 Sum_probs=61.9
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
.||+++|+|+ +.||+.|...-... .++.+.+. +++.++-+..+.++. ..+.+
T Consensus 41 ~~K~vlvd~~-a~wC~~C~~me~~vf~d~~V~~~l~-~~fv~v~~d~~~~~~-----------------------~~l~~ 95 (153)
T 2dlx_A 41 QNKWLMINIQ-NVQDFACQCLNRDVWSNEAVKNIIR-EHFIFWQVYHDSEEG-----------------------QRYIQ 95 (153)
T ss_dssp HTCEEEEEEE-CSCTTTHHHHHHHTTTCHHHHHHHH-HTEEEEEEESSSHHH-----------------------HHHHH
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHhcCCHHHHHHHH-cCeEEEEEecCCHhH-----------------------HHHHH
Confidence 4899999998 88999998765544 34444443 367777777765321 23345
Q ss_pred HhCCCCCCCcceeeEEEEcCC-CcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 117 QLGIRHETGVALRATFIFDPQ-NIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~-g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
.|++. ..|++++||++ |+.+... .. .+.+++++.|++..
T Consensus 96 ~y~v~-----~~P~~~fld~~~G~~l~~~-~g----~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 96 FYKLG-----DFPYVSILDPRTGQKLVEW-HQ----LDVSSFLDQVTGFL 135 (153)
T ss_dssp HHTCC-----SSSEEEEECTTTCCCCEEE-SS----CCHHHHHHHHHHHH
T ss_pred HcCCC-----CCCEEEEEeCCCCcEeeec-CC----CCHHHHHHHHHHHH
Confidence 67775 46799999999 8776654 21 47778777776554
No 217
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.46 E-value=4.8e-07 Score=61.78 Aligned_cols=86 Identities=14% Similarity=0.211 Sum_probs=64.2
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
++++||.|| +.||++|+...|.|.++.+++. ++.++-|..|.. +..|++
T Consensus 23 ~~~vvv~F~-a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~~----------------------------~~~~~v 71 (118)
T 3evi_A 23 DVWVIIHLY-RSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNSC----------------------------IQHYHD 71 (118)
T ss_dssp TCEEEEEEE-CTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGGT----------------------------STTCCG
T ss_pred CCeEEEEEe-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHHh----------------------------HHHCCC
Confidence 358989888 8999999999999999998886 588888877641 134666
Q ss_pred CCCCCcceeeEEEEcCCCcEEEEEeccCCC---CCCHHHHHHHHHh
Q psy2878 121 RHETGVALRATFIFDPQNIIQHITVNNLNV---GRNPIETLRILDA 163 (181)
Q Consensus 121 ~~~~g~~~p~~~liD~~g~i~~~~~~~~~~---~~~~~~ll~~l~~ 163 (181)
. ..|+.+++ ++|+.+.+..+.... ....+++-..|.+
T Consensus 72 ~-----~~PT~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 72 N-----CLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp G-----GCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred C-----CCCEEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 5 56788888 799999999753322 3356777776654
No 218
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.43 E-value=2.6e-07 Score=81.51 Aligned_cols=94 Identities=9% Similarity=0.040 Sum_probs=71.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.|++++|.|| ++||++|+..+|.+.++.++++. ++.++.|..+. +..+++.|+
T Consensus 674 ~~~~v~v~F~-a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~-------------------------~~~~~~~~~ 726 (780)
T 3apo_A 674 GKTHWVVDFY-APWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQA-------------------------YPQTCQKAG 726 (780)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCC-------------------------CHHHHHhcC
Confidence 4688999998 89999999999999999999875 58888887753 235677888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+. ..|+++++ ++|+++.++.+........+++.+.|+++..
T Consensus 727 v~-----~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~ 767 (780)
T 3apo_A 727 IK-----AYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKLE 767 (780)
T ss_dssp CC-----SSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHTT
T ss_pred CC-----cCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHHH
Confidence 86 56798888 7898876554211013567888888877654
No 219
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.39 E-value=2.1e-07 Score=69.96 Aligned_cols=44 Identities=11% Similarity=-0.105 Sum_probs=33.7
Q ss_pred eecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 34 ~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
+.+....||++|+.|| ..|||+|....+.|.++.+ .+++++.+.
T Consensus 79 ~~~g~~~~k~~vv~F~-d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~ 122 (216)
T 1eej_A 79 IVYKAPQEKHVITVFT-DITCGYCHKLHEQMADYNA----LGITVRYLA 122 (216)
T ss_dssp EEECCTTCCEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEE
T ss_pred eeecCCCCCEEEEEEE-CCCCHHHHHHHHHHHHHHh----CCcEEEEEE
Confidence 4445556788888888 8899999999999887754 367777664
No 220
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.36 E-value=3.9e-07 Score=73.18 Aligned_cols=89 Identities=12% Similarity=0.135 Sum_probs=64.1
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhc-CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNER-NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~-~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
.+|+++|.|| +.||++|+...|.+.++.+++++. ++.++.|..+... ++.|
T Consensus 266 ~~k~~lv~f~-a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~---------------------------~~~~ 317 (361)
T 3uem_A 266 EKKNVFVEFY-APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE---------------------------VEAV 317 (361)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB---------------------------CSSC
T ss_pred CCCcEEEEEe-cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc---------------------------hhhc
Confidence 4788999988 999999999999999999999875 4555555443210 2346
Q ss_pred CCCCCCCcceeeEEEEcCC-CcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 119 GIRHETGVALRATFIFDPQ-NIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~-g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
++. ..|++++++++ |+....+.+ ....+++.+.|++..
T Consensus 318 ~v~-----~~Pt~~~~~~~~~~~~~~~~G----~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 318 KVH-----SFPTLKFFPASADRTVIDYNG----ERTLDGFKKFLESGG 356 (361)
T ss_dssp CCC-----SSSEEEEECSSSSCCCEECCS----CSSHHHHHHHHTTTS
T ss_pred CCc-----ccCeEEEEECCCCcceeEecC----CCCHHHHHHHHHhcC
Confidence 776 56799999655 565555522 367888998887653
No 221
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.33 E-value=1.2e-07 Score=64.60 Aligned_cols=90 Identities=9% Similarity=-0.030 Sum_probs=54.2
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh-cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE-RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~-~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
.+.+||.|| +.||+.|...-+.+.+.++.-.. ..+.++-|..+.. ....++..|+
T Consensus 18 ~~~~LV~F~-A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~-----------------------~~~~la~~~~ 73 (116)
T 3dml_A 18 AELRLLMFE-QPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDP-----------------------LPPGLELARP 73 (116)
T ss_dssp -CEEEEEEE-CTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSC-----------------------CCTTCBCSSC
T ss_pred CCCEEEEEE-CCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCC-----------------------CchhHHHHCC
Confidence 356888888 88999998766544333322111 1245555555431 0123445566
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
+. ..|+.++++ +|+.+.+..+- ...+++.+.|+.+
T Consensus 74 V~-----g~PT~i~f~-~G~ev~Ri~G~----~~~~~f~~~L~~~ 108 (116)
T 3dml_A 74 VT-----FTPTFVLMA-GDVESGRLEGY----PGEDFFWPMLARL 108 (116)
T ss_dssp CC-----SSSEEEEEE-TTEEEEEEECC----CCHHHHHHHHHHH
T ss_pred CC-----CCCEEEEEE-CCEEEeeecCC----CCHHHHHHHHHHH
Confidence 65 568999998 99999988532 2335666666544
No 222
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.32 E-value=3.9e-07 Score=75.97 Aligned_cols=67 Identities=19% Similarity=0.204 Sum_probs=53.2
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhc-------CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCch
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNER-------NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGS 113 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~-------~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 113 (181)
+|++||.|| ++||++|+.+.|.+.++.+++.+. .+.++.|..+. +.+
T Consensus 42 ~k~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~-------------------------~~~ 95 (470)
T 3qcp_A 42 LCPWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS-------------------------EVD 95 (470)
T ss_dssp GSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT-------------------------CHH
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC-------------------------CHH
Confidence 478999998 899999999999999999998743 27888887753 246
Q ss_pred HHHHhCCCCCCCcceeeEEEEcCCC
Q psy2878 114 LIDQLGIRHETGVALRATFIFDPQN 138 (181)
Q Consensus 114 ~~~~~gv~~~~g~~~p~~~liD~~g 138 (181)
+++.|++. ..|+++++++.|
T Consensus 96 la~~y~V~-----~~PTlilf~~gg 115 (470)
T 3qcp_A 96 LCRKYDIN-----FVPRLFFFYPRD 115 (470)
T ss_dssp HHHHTTCC-----SSCEEEEEEESS
T ss_pred HHHHcCCC-----ccCeEEEEECCC
Confidence 77788886 567888887555
No 223
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.27 E-value=5.1e-07 Score=75.82 Aligned_cols=88 Identities=10% Similarity=0.200 Sum_probs=61.4
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhc--CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNER--NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~--~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
.+|+++|.|| ++||++|+...|.+.++.+++... ++.++.|..+. + ...+
T Consensus 375 ~~k~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~---------------~-----------~~~~- 426 (504)
T 2b5e_A 375 PKKDVLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE---------------N-----------DVRG- 426 (504)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG---------------C-----------CCSS-
T ss_pred CCCCEEEEEE-CCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc---------------c-----------cccc-
Confidence 4789999998 899999999999999999999843 45555555421 0 0112
Q ss_pred hCCCCCCCcceeeEEEEcCCCcE--EEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 118 LGIRHETGVALRATFIFDPQNII--QHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~i--~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
|++. ..|+++++ ++|+. +..+. -....+++++.|++..
T Consensus 427 ~~v~-----~~Pt~~~~-~~G~~~~~~~~~----G~~~~~~l~~~i~~~~ 466 (504)
T 2b5e_A 427 VVIE-----GYPTIVLY-PGGKKSESVVYQ----GSRSLDSLFDFIKENG 466 (504)
T ss_dssp CCCS-----SSSEEEEE-CCTTSCCCCBCC----SCCCHHHHHHHHHHHC
T ss_pred CCce-----ecCeEEEE-eCCceecceEec----CCCCHHHHHHHHHhcC
Confidence 6665 45788888 78876 33332 1257788888887764
No 224
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.23 E-value=1.1e-05 Score=58.88 Aligned_cols=92 Identities=13% Similarity=0.220 Sum_probs=61.4
Q ss_pred CCeEEEEEeeC------CCCCCChhHHHHHHHHHHHHHhc----CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcC
Q psy2878 41 GKWKIFYFYPK------DFTFVCPTEISEYNKLVKDFNER----NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDT 110 (181)
Q Consensus 41 gk~~ll~F~~~------~~cp~C~~~~~~l~~l~~~~~~~----~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~ 110 (181)
+.++||.||.. .||.+|+...|.+.++.++|... .+.+.-|..|.
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~------------------------- 91 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE------------------------- 91 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT-------------------------
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc-------------------------
Confidence 34788888841 59999999999999999999732 34555444443
Q ss_pred CchHHHHhCCCCCCCcceeeEEEEcCCCcEE-----------EEEeccCC--CCCCHHHHHHHHHhh
Q psy2878 111 NGSLIDQLGIRHETGVALRATFIFDPQNIIQ-----------HITVNNLN--VGRNPIETLRILDAI 164 (181)
Q Consensus 111 ~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~-----------~~~~~~~~--~~~~~~~ll~~l~~l 164 (181)
+.+++..||+. +.|+.+++-+.+... +.+ ... ....++.+.+.|.+.
T Consensus 92 ~~~la~~~~I~-----siPtl~~F~~g~~~~~~~~~~~~~~~~~y--~~~~~~~~~ae~la~fi~~~ 151 (178)
T 3ga4_A 92 VPQLVKDLKLQ-----NVPHLVVYPPAESNKQSQFEWKTSPFYQY--SLVPENAENTLQFGDFLAKI 151 (178)
T ss_dssp CHHHHHHTTCC-----SSCEEEEECCCCGGGGGGCCTTTSCCEEE--CCCGGGTTCHHHHHHHHHHH
T ss_pred CHHHHHHcCCC-----CCCEEEEEcCCCCCCccccccccCCccee--ecccCCCcCHHHHHHHHHHh
Confidence 35667778876 566777775444332 222 122 257888999988654
No 225
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.17 E-value=3.3e-06 Score=62.04 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=35.4
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
.|+++|+.|| ..|||.|....+.+.++.+++.+ ++.+.-+..+
T Consensus 24 ~~~~~vv~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFF-AYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEE-CCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 4688888887 88999999999999999888765 5777777764
No 226
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.11 E-value=2.4e-05 Score=63.25 Aligned_cols=90 Identities=6% Similarity=-0.011 Sum_probs=62.0
Q ss_pred CCCeEEEEEeeCCCCCCChhHH------HHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCch
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEI------SEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGS 113 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~------~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 113 (181)
.+++++|.|| +.||++|...- |.+.++.++++..++.+..|..+. +.+
T Consensus 29 ~~~~vlV~Fy-ApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~-------------------------~~~ 82 (367)
T 3us3_A 29 KYEVLALLYH-EPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK-------------------------DAA 82 (367)
T ss_dssp HCSEEEEEEE-CCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT-------------------------THH
T ss_pred hCCeEEEEEE-CCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc-------------------------cHH
Confidence 3578888888 89998873322 466777777765567777777664 236
Q ss_pred HHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 114 LIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 114 ~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+++.|++. ..|+.+++. +|+.+ .+. -.+..+.+++.+++...
T Consensus 83 l~~~~~V~-----~~PTl~~f~-~G~~~-~y~----G~~~~~~i~~~i~~~~~ 124 (367)
T 3us3_A 83 VAKKLGLT-----EEDSIYVFK-EDEVI-EYD----GEFSADTLVEFLLDVLE 124 (367)
T ss_dssp HHHHHTCC-----STTEEEEEE-TTEEE-ECC----SCCSHHHHHHHHHHHHS
T ss_pred HHHHcCCC-----cCceEEEEE-CCcEE-EeC----CCCCHHHHHHHHHHhcC
Confidence 77889987 567888885 78764 331 13578888888876543
No 227
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.05 E-value=6.3e-06 Score=60.33 Aligned_cols=42 Identities=10% Similarity=0.057 Sum_probs=33.2
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS 83 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~ 83 (181)
.++++|+.|| ..|||+|....+.|.++.+++.+ ++.+.-+..
T Consensus 24 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELF-WYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEE-CCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 4677888887 88999999999999988888765 566665544
No 228
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.01 E-value=2.5e-05 Score=59.58 Aligned_cols=118 Identities=15% Similarity=0.134 Sum_probs=64.6
Q ss_pred eecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec---CC--HHHH---------HHHHHHcCCC
Q psy2878 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS---DN--EFVK---------LAWRRENSNL 99 (181)
Q Consensus 34 ~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~---d~--~~~~---------~~~~~~~~~~ 99 (181)
+.+..-.++.+|+.|+ ..|||+|....+.+.++.+. .++.++-+.. ++ .... .++...+...
T Consensus 90 i~~G~~~ak~~v~~F~-D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~ 165 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFA-DPFCPYCKQFWQQARPWVDS---GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEAS 165 (241)
T ss_dssp EEESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHT---TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHT
T ss_pred ceECCCCCCeEEEEEE-CCCChhHHHHHHHHHHHHhC---CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHH
Confidence 3444445677777777 88999999999988876553 2466654433 11 1111 0111111000
Q ss_pred c---ccc--------eeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 100 Y---KLN--------HWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 100 ~---~~~--------~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+ ++. .....+.+.++++.+|+. .+|++++.|.+|++ ....+ . ...+++.+.|++..
T Consensus 166 ~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~-----gtPt~vi~~~~G~~-~~~~G-~---~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 166 GGKLKLNVPANVSTEQMKVLSDNEKLMDDLGAN-----VTPAIYYMSKENTL-QQAVG-L---PDQKTLNIIMGNKL 232 (241)
T ss_dssp TTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCC-----SSCEEEEEETTTEE-EEEES-S---CCHHHHHHHTTC--
T ss_pred hccCCCCccccCCHHHHHHHHHHHHHHHHcCCC-----CCCEEEEECCCCCE-EEecC-C---CCHHHHHHHHHHHH
Confidence 1 010 000122346678889987 56799999888976 23322 1 34567777776554
No 229
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.95 E-value=3e-05 Score=53.44 Aligned_cols=97 Identities=10% Similarity=-0.030 Sum_probs=64.3
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
++++++.|| +. |..|....+.|.++.++|+.+ +.++-|..|. ..+++..||+
T Consensus 23 ~~pv~v~f~-a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~-------------------------~~~~a~~~gi 74 (133)
T 2djk_A 23 GIPLAYIFA-ET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA-------------------------FGAHAGNLNL 74 (133)
T ss_dssp TSCEEEEEC-SC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT-------------------------TGGGTTTTTC
T ss_pred CCCEEEEEe-cC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH-------------------------hHHHHHHcCC
Confidence 467888888 66 678998899999998888653 7777666553 2345567888
Q ss_pred CCCCCcceeeEEEEcC-CCcEEEEEeccCCCCCCHHHHHHHHHhhccCCccc
Q psy2878 121 RHETGVALRATFIFDP-QNIIQHITVNNLNVGRNPIETLRILDAIQTGKLCA 171 (181)
Q Consensus 121 ~~~~g~~~p~~~liD~-~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~~~~~ 171 (181)
. +-..|+.++++. +|+. +... ..-....+.+.+.|+++..|+..|
T Consensus 75 ~---~~~iPtl~i~~~~~g~~-~~~~--~~g~~~~~~l~~fi~~~l~Gkl~p 120 (133)
T 2djk_A 75 K---TDKFPAFAIQEVAKNQK-FPFD--QEKEITFEAIKAFVDDFVAGKIEP 120 (133)
T ss_dssp C---SSSSSEEEEECTTTCCB-CCCC--SSSCCCHHHHHHHHHHHHHTCCCC
T ss_pred C---cccCCEEEEEecCcCcc-cCCC--CccccCHHHHHHHHHHHHcCCcCc
Confidence 6 211678888874 5776 4431 112234567888887777665444
No 230
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.92 E-value=2.9e-05 Score=56.79 Aligned_cols=42 Identities=24% Similarity=0.260 Sum_probs=33.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS 83 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~ 83 (181)
.++.+|+.|| ..+||.|....+.|.++.+++.. ++.+..+..
T Consensus 21 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFF-GYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEE-CTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEE-CCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 4677777777 78999999999999999888764 577776664
No 231
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.92 E-value=4.1e-05 Score=57.07 Aligned_cols=70 Identities=14% Similarity=-0.007 Sum_probs=47.5
Q ss_pred CCCCeEEEEEeeCC-CCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 39 FPGKWKIFYFYPKD-FTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 39 ~~gk~~ll~F~~~~-~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
..++.++++|| +. ||++|....+.+.++.+. ..++.++.|..+.++. .++++.
T Consensus 20 ~~~~v~lv~f~-~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~~~~-----------------------~~~~~~ 73 (226)
T 1a8l_A 20 MVNPVKLIVFV-RKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDTPEG-----------------------KELAKR 73 (226)
T ss_dssp CCSCEEEEEEE-CSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTSHHH-----------------------HHHHHH
T ss_pred cCCCeEEEEEe-cCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCCccc-----------------------HHHHHH
Confidence 34455556665 88 999999999988887654 2357888777765321 356677
Q ss_pred hCCCCCCCcceeeEEEEcCCCcE
Q psy2878 118 LGIRHETGVALRATFIFDPQNII 140 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~i 140 (181)
||+. ..|+.+++ ++|+.
T Consensus 74 ~~v~-----~~Pt~~~~-~~g~~ 90 (226)
T 1a8l_A 74 YRID-----RAPATTIT-QDGKD 90 (226)
T ss_dssp TTCC-----SSSEEEEE-ETTBC
T ss_pred cCCC-----cCceEEEE-cCCce
Confidence 8876 56787777 46643
No 232
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.84 E-value=6.7e-06 Score=55.06 Aligned_cols=70 Identities=9% Similarity=-0.017 Sum_probs=43.3
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
+++.+++ || ++|||+|....+.|.++.. .+.++-|..+... .+. ...+++.||
T Consensus 18 ~~~~vv~-f~-a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~~~~--~~~------------------~~~l~~~~~ 70 (116)
T 2e7p_A 18 SSAPVVV-FS-KTYCGYCNRVKQLLTQVGA-----SYKVVELDELSDG--SQL------------------QSALAHWTG 70 (116)
T ss_dssp TSSSEEE-EE-CTTCHHHHHHHHHHHHHTC-----CCEEEEGGGSTTH--HHH------------------HHHHHHHHS
T ss_pred cCCCEEE-EE-CCCChhHHHHHHHHHHcCC-----CeEEEEccCCCCh--HHH------------------HHHHHHHhC
Confidence 3555555 66 8999999998888777632 2344444444321 010 135677888
Q ss_pred CCCCCCcceeeEEEEcCCCcEEEEE
Q psy2878 120 IRHETGVALRATFIFDPQNIIQHIT 144 (181)
Q Consensus 120 v~~~~g~~~p~~~liD~~g~i~~~~ 144 (181)
+. ..|++| + +|+++..+
T Consensus 71 v~-----~~Pt~~-~--~g~~v~~~ 87 (116)
T 2e7p_A 71 RG-----TVPNVF-I--GGKQIGGC 87 (116)
T ss_dssp CC-----SSCEEE-E--TTEEEECH
T ss_pred CC-----CcCEEE-E--CCEEECCh
Confidence 76 566774 4 68887665
No 233
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.72 E-value=0.00033 Score=50.19 Aligned_cols=50 Identities=10% Similarity=-0.049 Sum_probs=37.4
Q ss_pred eeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhc-CcEEEEEec
Q psy2878 33 VITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNER-NAILLGGSS 83 (181)
Q Consensus 33 ~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~-~~~vi~Is~ 83 (181)
.+.+....++.+|+.|+ ..+||.|....+.+.++.+++.+. +++++....
T Consensus 19 ~~~~G~~~a~v~i~~f~-D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFI-NVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SEEESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CcccCCCCCCeEEEEEE-CCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 45666667787777776 779999999999999998888443 477766543
No 234
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.70 E-value=8.2e-05 Score=54.18 Aligned_cols=42 Identities=10% Similarity=-0.004 Sum_probs=32.0
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS 83 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~ 83 (181)
.++.+|+.|| ..+||.|....+.+.++.+++.. ++.+..+..
T Consensus 24 ~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIF-GYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEE-CCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 4676777776 78999999999999988887754 566665553
No 235
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.69 E-value=7.5e-05 Score=55.71 Aligned_cols=106 Identities=12% Similarity=0.052 Sum_probs=58.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec-----CCHHH------------HHHHHHHcCCCccc
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS-----DNEFV------------KLAWRRENSNLYKL 102 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~-----d~~~~------------~~~~~~~~~~~~~~ 102 (181)
.++++|+.|+ ..|||+|....+.|.++.+ .++.+..+.. ++... .++|...+. ...+
T Consensus 85 ~~k~~vv~F~-d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~-~~~~ 158 (211)
T 1t3b_A 85 NEKHVVTVFM-DITCHYCHLLHQQLKEYND----LGITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEK-GNLP 158 (211)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHT-TCCC
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHh----CCcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHc-CCCC
Confidence 4578888887 8899999999988887533 3666654432 11110 111211110 0011
Q ss_pred ce---eEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 103 NH---WQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 103 ~~---~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
+. ....+.+.++++.+|+. .+|++++ .||+. . .+ ....+++.+.|++.+
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~-----gTPt~vi--~nG~~---~-~G---~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVR-----GTPSIVT--STGEL---I-GG---YLKPADLLRALEETA 210 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCC-----SSCEEEC--TTSCC---C-CS---CCCHHHHHHHHHHCC
T ss_pred ChHHHHHHHHHHHHHHHHcCCC-----cCCEEEE--eCCEE---e-cC---CCCHHHHHHHHHhcc
Confidence 10 11122346788899987 5677766 46762 1 11 135677777776543
No 236
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.68 E-value=0.00023 Score=60.09 Aligned_cols=82 Identities=12% Similarity=0.082 Sum_probs=57.1
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
++..+..|| +.|||+|+...|.|+++..++. ++.+..|..+. ..+++..|++
T Consensus 117 ~~~~i~~f~-a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~-------------------------~~~~~~~~~i 168 (521)
T 1hyu_A 117 GDFEFETYY-SLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGT-------------------------FQNEITERNV 168 (521)
T ss_dssp SCEEEEEEE-CTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTT-------------------------CHHHHHHTTC
T ss_pred CCcceEEEE-CCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechh-------------------------hHHHHHHhCC
Confidence 455556665 9999999999999998877764 67777776653 2356667887
Q ss_pred CCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 121 RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 121 ~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
. +.|+.++ +|+.+... ....+++++.+++.
T Consensus 169 ~-----svPt~~i---~g~~~~~G------~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 169 M-----GVPAVFV---NGKEFGQG------RMTLTEIVAKVDTG 198 (521)
T ss_dssp C-----SSSEEEE---TTEEEEES------CCCHHHHHHHHCCS
T ss_pred C-----ccCEEEE---CCEEEecC------CCCHHHHHHHHhhc
Confidence 6 6677766 88887542 13456777776554
No 237
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.68 E-value=0.00015 Score=54.15 Aligned_cols=72 Identities=8% Similarity=-0.074 Sum_probs=48.4
Q ss_pred CeEEEEEe----eCCCCCCChhHHHHHHHHHHHHHh-cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 42 KWKIFYFY----PKDFTFVCPTEISEYNKLVKDFNE-RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 42 k~~ll~F~----~~~~cp~C~~~~~~l~~l~~~~~~-~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
++++|.|| ++.||+.|...++.+.++++++.+ ..+.+..|..+ .+.++++
T Consensus 21 ~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~-------------------------~~~~l~~ 75 (229)
T 2ywm_A 21 EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPF-------------------------THKEETE 75 (229)
T ss_dssp SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTT-------------------------TCHHHHH
T ss_pred CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCc-------------------------ccHHHHH
Confidence 45666666 356677778888888888877753 34666666332 2457888
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcEEEEE
Q psy2878 117 QLGIRHETGVALRATFIFDPQNIIQHIT 144 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i~~~~ 144 (181)
.||+. ..|+..+++ +|.....+
T Consensus 76 ~~~v~-----~~Ptl~~~~-~~~~~~~~ 97 (229)
T 2ywm_A 76 KYGVD-----RVPTIVIEG-DKDYGIRY 97 (229)
T ss_dssp HTTCC-----BSSEEEEES-SSCCCEEE
T ss_pred HcCCC-----cCcEEEEEC-CCccccee
Confidence 89987 567888885 55555555
No 238
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.55 E-value=0.00017 Score=44.96 Aligned_cols=66 Identities=14% Similarity=0.126 Sum_probs=41.9
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCC
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHET 124 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~ 124 (181)
+..|+ +.|||+|....+.|.++.++ .++.+..+..|... .+.++++.||+.
T Consensus 4 ~~~f~-~~~C~~C~~~~~~l~~~~~~---~~~~~~~~~v~~~~----------------------~~~~~~~~~gv~--- 54 (80)
T 2k8s_A 4 KAIFY-HAGCPVCVSAEQAVANAIDP---SKYTVEIVHLGTDK----------------------ARIAEAEKAGVK--- 54 (80)
T ss_dssp EEEEE-ECSCHHHHHHHHHHHHHSCT---TTEEEEEEETTTCS----------------------STHHHHHHHTCC---
T ss_pred eEEEe-CCCCCchHHHHHHHHHHHHh---cCCeEEEEEecCCh----------------------hhHHHHHHcCCC---
Confidence 44455 88999999998888776543 34555555554310 123556678876
Q ss_pred CcceeeEEEEcCCCcEEEEE
Q psy2878 125 GVALRATFIFDPQNIIQHIT 144 (181)
Q Consensus 125 g~~~p~~~liD~~g~i~~~~ 144 (181)
..|++++ +|+++...
T Consensus 55 --~vPt~~i---~g~~~~~G 69 (80)
T 2k8s_A 55 --SVPALVI---DGAAFHIN 69 (80)
T ss_dssp --EEEEEEE---TTEEEEEE
T ss_pred --cCCEEEE---CCEEEEec
Confidence 6777766 78876543
No 239
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.48 E-value=0.00014 Score=45.56 Aligned_cols=37 Identities=11% Similarity=-0.070 Sum_probs=28.1
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
|+.|+ ++|||.|....+.|.++..++ .++.+.-|..+
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~ 39 (85)
T 1ego_A 3 TVIFG-RSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIR 39 (85)
T ss_dssp EEEEC-CTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHH
T ss_pred EEEEe-CCCCCCHHHHHHHHHHHHhcC--CCceEEEEecc
Confidence 44555 889999999999888887765 36888777654
No 240
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.33 E-value=0.001 Score=53.12 Aligned_cols=95 Identities=12% Similarity=0.141 Sum_probs=63.2
Q ss_pred CeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 42 KWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 42 k~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
+.++|+|+ +.||+.|....+.+.++.++|+.+ +.++.|..+..+ ...+++.||+.
T Consensus 136 ~~~~v~F~-~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~~-----------------------~~~~~~~fgi~ 190 (361)
T 3uem_A 136 KTHILLFL-PKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHTD-----------------------NQRILEFFGLK 190 (361)
T ss_dssp CEEEEEEC-CSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSGG-----------------------GHHHHHHTTCC
T ss_pred CcEEEEEE-eCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChHH-----------------------HHHHHHHcCCC
Confidence 45566666 889999999999999999999864 777777655311 24566778875
Q ss_pred CCCCcceeeEEEEcCCCcE-EEEEeccCCCCCCHHHHHHHHHhhccC
Q psy2878 122 HETGVALRATFIFDPQNII-QHITVNNLNVGRNPIETLRILDAIQTG 167 (181)
Q Consensus 122 ~~~g~~~p~~~liD~~g~i-~~~~~~~~~~~~~~~~ll~~l~~l~~~ 167 (181)
+-..|+..+++..+.. .|.. .....+.+++.+.++....+
T Consensus 191 ---~~~~P~~~~~~~~~~~~ky~~---~~~~~~~~~l~~fi~~~l~g 231 (361)
T 3uem_A 191 ---KEECPAVRLITLEEEMTKYKP---ESEELTAERITEFCHRFLEG 231 (361)
T ss_dssp ---TTTCSEEEEEECC--CCEECC---SSCCCCHHHHHHHHHHHHTT
T ss_pred ---ccCCccEEEEEcCCcccccCC---CccccCHHHHHHHHHHHhcC
Confidence 2126788888764432 3322 12246778888888877654
No 241
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.24 E-value=0.00049 Score=44.05 Aligned_cols=74 Identities=12% Similarity=0.113 Sum_probs=43.8
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCC
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHET 124 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~ 124 (181)
|+.|+ +.||++|....+.|.++..++ +.-|..|. +.+++.+||+
T Consensus 3 vv~f~-a~~C~~C~~~~~~L~~~~~~~------~~~vdid~-------------------------~~~l~~~~g~---- 46 (87)
T 1ttz_A 3 LTLYQ-RDDCHLCDQAVEALAQARAGA------FFSVFIDD-------------------------DAALESAYGL---- 46 (87)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHTTCCC------EEEEECTT-------------------------CHHHHHHHTT----
T ss_pred EEEEE-CCCCchHHHHHHHHHHHHHhh------eEEEECCC-------------------------CHHHHHHhCC----
Confidence 45555 999999987777665543221 23333332 3345566775
Q ss_pred CcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 125 GVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 125 g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
..|++++ .+|+.+. + ..+.+++.+.|++..
T Consensus 47 --~vPtl~~--~~G~~v~---g----~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 47 --RVPVLRD--PMGRELD---W----PFDAPRLRAWLDAAP 76 (87)
T ss_dssp --TCSEEEC--TTCCEEE---S----CCCHHHHHHHHHTCC
T ss_pred --CcCeEEE--ECCEEEe---C----CCCHHHHHHHHHHHH
Confidence 2566665 6799874 1 135567777776543
No 242
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.72 E-value=0.0062 Score=44.20 Aligned_cols=105 Identities=11% Similarity=0.044 Sum_probs=64.9
Q ss_pred CCCCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchH
Q psy2878 38 SFPGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSL 114 (181)
Q Consensus 38 ~~~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 114 (181)
.-.+|+++|+++ +.+|+.|......+ .++.+.+. .++.+++.+.+..+....+.... .-.+ ...+
T Consensus 52 k~e~K~LlVyLh-s~~~~~~~~f~~~~L~~~~V~~~l~-~nfV~w~~dv~~~e~~~~~~~~~----~~~~------g~~~ 119 (178)
T 2ec4_A 52 ARDRKLLAIYLH-HDESVLTNVFCSQMLCAESIVSYLS-QNFITWAWDLTKDSNRARFLTMC----NRHF------GSVV 119 (178)
T ss_dssp TTTCCEEEEEEE-CSSCSHHHHHHHHTTTCHHHHHHHH-HTEEEEEEECCSHHHHHHHHHHH----HHHT------CHHH
T ss_pred hhhCcEEEEEEe-CCCCccHHHHHHHhcCCHHHHHHHH-cCEEEEEEeCCCchhhhhhhhhh----hhhh------HHHH
Confidence 446788888888 88999887665443 23333343 48999999999877655544322 0000 1233
Q ss_pred H---HHhCCCCCCCcceeeEEEEcCCC---cEEEEEeccCCCCCCHHHHHHHHHh
Q psy2878 115 I---DQLGIRHETGVALRATFIFDPQN---IIQHITVNNLNVGRNPIETLRILDA 163 (181)
Q Consensus 115 ~---~~~gv~~~~g~~~p~~~liD~~g---~i~~~~~~~~~~~~~~~~ll~~l~~ 163 (181)
+ +.|++. ..|+..+|++++ .++.+..+. ...++++..|.+
T Consensus 120 a~~~~~~~~~-----~~P~l~ii~~~~~~~~vl~~~~G~----~~~~~ll~~L~~ 165 (178)
T 2ec4_A 120 AQTIRTQKTD-----QFPLFLIIMGKRSSNEVLNVIQGN----TTVDELMMRLMA 165 (178)
T ss_dssp HHHHHHSCST-----TCSEEEEECCCSSCCCEEEEECSC----CCHHHHHHHHHH
T ss_pred HHHHhhcCCC-----CCCeEEEEEcCCCceEEEEEEeCC----CCHHHHHHHHHH
Confidence 3 347765 567999998774 677777433 345666665543
No 243
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.51 E-value=0.0007 Score=44.28 Aligned_cols=80 Identities=10% Similarity=-0.014 Sum_probs=48.0
Q ss_pred CeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 42 KWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 42 k~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
++.|+.|+ +.||++|....+.|.++. .++.+.-|..+.++ +.++++.|| .
T Consensus 16 ~~~v~~f~-~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~~~-----------------------~~el~~~~g-~ 65 (100)
T 1wjk_A 16 LPVLTLFT-KAPCPLCDEAKEVLQPYK-----DRFILQEVDITLPE-----------------------NSTWYERYK-F 65 (100)
T ss_dssp CCEEEEEE-CSSCHHHHHHHHHTSTTS-----SSSEEEEEETTSST-----------------------THHHHHHSS-S
T ss_pred CCEEEEEe-CCCCcchHHHHHHHHHhh-----hCCeEEEEECCCcc-----------------------hHHHHHHHC-C
Confidence 45666666 889999987776665442 34777777776321 124455666 5
Q ss_pred CCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 122 HETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 122 ~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
..|++ ++ +|+.+. . .. .+.+++.+.|+++.
T Consensus 66 -----~vP~l-~~--~g~~~~-~-~g----~~~~~l~~~l~~~~ 95 (100)
T 1wjk_A 66 -----DIPVF-HL--NGQFLM-M-HR----VNTSKLEKQLRKLS 95 (100)
T ss_dssp -----SCSEE-EE--SSSEEE-E-SS----CCHHHHHHHHHSSS
T ss_pred -----CCCEE-EE--CCEEEE-e-cC----CCHHHHHHHHHHHH
Confidence 45654 44 577652 2 12 45567777776554
No 244
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.38 E-value=0.016 Score=43.79 Aligned_cols=30 Identities=3% Similarity=-0.083 Sum_probs=23.4
Q ss_pred CCeEEEEEeeCCC--CCCChhHHHHHHHHHHHH
Q psy2878 41 GKWKIFYFYPKDF--TFVCPTEISEYNKLVKDF 71 (181)
Q Consensus 41 gk~~ll~F~~~~~--cp~C~~~~~~l~~l~~~~ 71 (181)
+++++|.|| +.| |+.|....+.+.++.+..
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~ 56 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDTLRLMKLFEEES 56 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEE-eCCCCCCchHHHHHHHHHHHHhc
Confidence 467888888 567 999988887777777654
No 245
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.36 E-value=0.0021 Score=42.74 Aligned_cols=39 Identities=18% Similarity=0.097 Sum_probs=29.0
Q ss_pred eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 43 WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 43 ~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
..|+.|+ +.||+.|....+.|.++.+++ ++.+.-|..+.
T Consensus 30 ~~vv~y~-~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~ 68 (107)
T 2fgx_A 30 RKLVVYG-REGCHLCEEMIASLRVLQKKS---WFELEVINIDG 68 (107)
T ss_dssp CCEEEEE-CSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTT
T ss_pred cEEEEEe-CCCChhHHHHHHHHHHHHHhc---CCeEEEEECCC
Confidence 3466666 889999998888888876654 57777777664
No 246
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.27 E-value=0.0032 Score=44.22 Aligned_cols=33 Identities=27% Similarity=0.296 Sum_probs=23.0
Q ss_pred eecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHH
Q psy2878 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKL 67 (181)
Q Consensus 34 ~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l 67 (181)
+.+..-.++.+|+.|. -.+||+|....+.+.++
T Consensus 7 i~~~~~~a~~~vv~f~-D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 7 IKEVRGNGKLKVAVFS-DPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp EEEEETTCCEEEEEEE-CTTCHHHHHHHHHHTTC
T ss_pred eeeecCCCCEEEEEEE-CCCChhHHHHHHHHhhc
Confidence 3333334677777776 77899999888877654
No 247
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=96.25 E-value=0.014 Score=41.52 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=29.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
.++++|+-|+ .-.||.|....+.+.++.+++.+ ++.++-+
T Consensus 20 ~~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 20 SSSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CCCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 4678888887 56799999888888888877765 3444443
No 248
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.13 E-value=0.0092 Score=36.68 Aligned_cols=33 Identities=12% Similarity=0.083 Sum_probs=22.8
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
++.|+ +.|||.|....+.|.+ .++.+..|..+.
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~ 35 (81)
T 1h75_A 3 ITIYT-RNDCVQCHATKRAMEN-------RGFDFEMINVDR 35 (81)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EEEEc-CCCChhHHHHHHHHHH-------CCCCeEEEECCC
Confidence 34454 8899999876665553 467777777764
No 249
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.00 E-value=0.0031 Score=46.08 Aligned_cols=43 Identities=21% Similarity=0.293 Sum_probs=33.9
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
.++++|+.|| ..|||+|....+.+.++.+++.+ ++.+.-+..+
T Consensus 23 ~~~v~vv~f~-d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFF-GYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 4677888887 88999999999999988887766 5766666553
No 250
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.97 E-value=0.019 Score=39.08 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=20.9
Q ss_pred EEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 44 KIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 44 ~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
++| |+ +.|||+|+...+.|.++ ++.+..|..|.
T Consensus 29 vvv-f~-~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~ 61 (130)
T 2cq9_A 29 VVI-FS-KTSCSYCTMAKKLFHDM-------NVNYKVVELDL 61 (130)
T ss_dssp EEE-EE-CSSCSHHHHHHHHHHHH-------TCCCEEEETTT
T ss_pred EEE-EE-cCCChHHHHHHHHHHHc-------CCCcEEEECcC
Confidence 444 54 88999998777666543 45555555543
No 251
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=95.87 E-value=0.0035 Score=49.07 Aligned_cols=88 Identities=6% Similarity=-0.038 Sum_probs=51.3
Q ss_pred eeecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCc
Q psy2878 33 VITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNG 112 (181)
Q Consensus 33 ~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 112 (181)
.+.+++.-++..++.|| +.|||+|+...|.+.++.+++ .. |..|.. + . .|.+.
T Consensus 189 ~~~la~~l~~~~vV~F~-A~WC~~Ck~l~p~le~lA~~l-----~~--Vd~d~~--------------d--~---~~~~~ 241 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYG-AYWCPHCQDQKELFGAAFDQV-----PY--VECSPN--------------G--P---GTPQA 241 (291)
T ss_dssp HHHHHHHHHHTTCEEEE-CTTCHHHHHHHHHHGGGGGGS-----CE--EESCSS--------------C--S---SSCCC
T ss_pred HHHHHHHhCCCCEEEEE-CCCCHHHHHHHHHHHHHHHHc-----CE--EEEeec--------------C--c---hhhHH
Confidence 34454443344467777 999999999888888765332 11 122210 0 0 02357
Q ss_pred hHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q psy2878 113 SLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILD 162 (181)
Q Consensus 113 ~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~ 162 (181)
+++++|++. ..|+.++ +|+. +.+ ..+.+++.+.+.
T Consensus 242 ~la~~~gI~-----~vPT~~i---~G~~---~~G----~~~~~~L~~~l~ 276 (291)
T 3kp9_A 242 QECTEAGIT-----SYPTWII---NGRT---YTG----VRSLEALAVASG 276 (291)
T ss_dssp HHHHTTTCC-----STTEEEE---TTEE---EES----CCCHHHHHHHTC
T ss_pred HHHHHcCCc-----ccCeEEE---CCEE---ecC----CCCHHHHHHHHC
Confidence 888999987 4567544 6763 311 245677776654
No 252
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.66 E-value=0.032 Score=35.83 Aligned_cols=39 Identities=5% Similarity=0.031 Sum_probs=24.3
Q ss_pred eeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHH
Q psy2878 49 YPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR 94 (181)
Q Consensus 49 ~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~ 94 (181)
|..+|||.|...-. .+.+.|+.+.-+..+...+..+...
T Consensus 9 Ys~~~Cp~C~~aK~-------~L~~~gi~y~~idi~~d~~~~~~~~ 47 (92)
T 2lqo_A 9 YTTSWCGYCLRLKT-------ALTANRIAYDEVDIEHNRAAAEFVG 47 (92)
T ss_dssp EECTTCSSHHHHHH-------HHHHTTCCCEEEETTTCHHHHHHHH
T ss_pred EcCCCCHhHHHHHH-------HHHhcCCceEEEEcCCCHHHHHHHH
Confidence 34889999975443 3445678777777765444444333
No 253
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=95.62 E-value=0.014 Score=44.28 Aligned_cols=91 Identities=10% Similarity=0.084 Sum_probs=56.9
Q ss_pred CCeEEEEEeeC--CCCCCChhHHHHHHHHHHHHHh-cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHH
Q psy2878 41 GKWKIFYFYPK--DFTFVCPTEISEYNKLVKDFNE-RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117 (181)
Q Consensus 41 gk~~ll~F~~~--~~cp~C~~~~~~l~~l~~~~~~-~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 117 (181)
+++++|.|| + .||+ ..|.+.++.+++.. .++.|.-|..|... ++.+.++++.
T Consensus 22 ~~~vlV~Fy-A~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g--------------------~~~~~~l~~~ 76 (240)
T 2qc7_A 22 SKFVLVKFD-TQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYG--------------------DKLNMELSEK 76 (240)
T ss_dssp CSEEEEEEC-CSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSS--------------------SCCSHHHHHH
T ss_pred CCCEEEEEe-CCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCccc--------------------chhhHHHHHH
Confidence 578888888 6 8887 77888898888875 35777777755300 0012456677
Q ss_pred hCCCCCCCcceeeEEEEcCCCc--EEEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 118 LGIRHETGVALRATFIFDPQNI--IQHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 118 ~gv~~~~g~~~p~~~liD~~g~--i~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
|++. +-..|+.+++ ++|+ ....+.+ ....+.+.+.|++.
T Consensus 77 ~~V~---~~~~PTl~~f-~~G~~~~~~~y~G----~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 77 YKLD---KESYPVFYLF-RDGDFENPVPYTG----AVKVGAIQRWLKGQ 117 (240)
T ss_dssp TTCC---GGGCSEEEEE-ETTCSSCCEECCS----CSCHHHHHHHHHHT
T ss_pred cCCC---CCCCCEEEEE-eCCCcCcceeecC----CCCHHHHHHHHHHh
Confidence 7763 1135677777 4666 2333311 24567777777755
No 254
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=95.60 E-value=0.029 Score=42.76 Aligned_cols=94 Identities=10% Similarity=0.048 Sum_probs=57.4
Q ss_pred CCCeEEEEEee-CCCCCCChhHHHHHHHHHHHHHh--cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHH
Q psy2878 40 PGKWKIFYFYP-KDFTFVCPTEISEYNKLVKDFNE--RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLID 116 (181)
Q Consensus 40 ~gk~~ll~F~~-~~~cp~C~~~~~~l~~l~~~~~~--~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 116 (181)
.++++||.||. +.||+ ..|.+.++.+++.. .++.|.-|..+.... ..+.++++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~--------------------~~n~~la~ 87 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGE--------------------LENKALGD 87 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTT--------------------CTTHHHHH
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccc--------------------cccHHHHH
Confidence 35688888874 78997 78889999888875 357777777654100 00245666
Q ss_pred HhCCCCCCCcceeeEEEEcCCCcE--EEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 117 QLGIRHETGVALRATFIFDPQNII--QHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 117 ~~gv~~~~g~~~p~~~liD~~g~i--~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
.|+|. +-..|+.+++- |++ ...+ ...-....+++.+.|++.
T Consensus 88 ~~~V~---~~~~PTl~~F~--G~~~~~~~y--~~~G~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 88 RYKVD---DKNFPSIFLFK--GNADEYVQL--PSHVDVTLDNLKAFVSAN 130 (248)
T ss_dssp HTTCC---TTSCCEEEEES--SSSSSEEEC--CTTSCCCHHHHHHHHHHH
T ss_pred HhCCC---cCCCCeEEEEe--CCcCcceee--cccCCCCHHHHHHHHHHh
Confidence 77763 11356877774 763 2222 001235677888888765
No 255
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=95.60 E-value=0.016 Score=38.41 Aligned_cols=33 Identities=15% Similarity=0.022 Sum_probs=20.3
Q ss_pred EEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcE---EEEEecC
Q psy2878 44 KIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI---LLGGSSD 84 (181)
Q Consensus 44 ~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~---vi~Is~d 84 (181)
.|+.|+ +.|||.|....+.|. +.++. +.-|..+
T Consensus 20 ~vv~f~-~~~Cp~C~~~~~~L~-------~~~~~~~~~~~vdi~ 55 (114)
T 2hze_A 20 KVTIFV-KYTCPFCRNALDILN-------KFSFKRGAYEIVDIK 55 (114)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHT-------TSCBCTTSEEEEEGG
T ss_pred CEEEEE-eCCChhHHHHHHHHH-------HcCCCcCceEEEEcc
Confidence 445555 889999986655443 34555 5555554
No 256
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=95.59 E-value=0.018 Score=34.61 Aligned_cols=30 Identities=10% Similarity=0.089 Sum_probs=21.0
Q ss_pred eeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 49 YPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 49 ~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
|.+.|||.|....+.|.+ .++.+..+..+.
T Consensus 6 y~~~~C~~C~~~~~~l~~-------~~i~~~~~di~~ 35 (75)
T 1r7h_A 6 YTKPACVQCTATKKALDR-------AGLAYNTVDISL 35 (75)
T ss_dssp EECTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EeCCCChHHHHHHHHHHH-------cCCCcEEEECCC
Confidence 348899999877666554 367776777664
No 257
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.44 E-value=0.042 Score=41.19 Aligned_cols=58 Identities=5% Similarity=0.187 Sum_probs=42.9
Q ss_pred ecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEE
Q psy2878 82 SSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHIT 144 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~ 144 (181)
+.++....++.+..+.....+.++.+.+.+..+++.||+. ..|+.+|++++|++....
T Consensus 165 ~~~~~~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~-----~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 165 EXGGSYLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVT-----DFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp ECTTCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCC-----CSSEEEEEETTSCEEECC
T ss_pred EECCcchHHHHHHHhccCCceEEEEEeCchHHHHHHcCCC-----CCCeEEEEeCCCCeEeec
Confidence 3333334455555554445677888888889999999997 568999999999998776
No 258
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=95.36 E-value=0.027 Score=39.31 Aligned_cols=20 Identities=15% Similarity=0.271 Sum_probs=14.5
Q ss_pred EEeeCCCCCCChhHHHHHHHH
Q psy2878 47 YFYPKDFTFVCPTEISEYNKL 67 (181)
Q Consensus 47 ~F~~~~~cp~C~~~~~~l~~l 67 (181)
+|+ +.|||+|....+.|.++
T Consensus 53 vf~-~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 53 IFS-KTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EEE-CTTCHHHHHHHHHHHHH
T ss_pred EEE-CCCChhHHHHHHHHHHc
Confidence 354 89999998777666543
No 259
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=95.27 E-value=0.03 Score=37.42 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=19.9
Q ss_pred EEEEeeCCCCCCChhH-HHHHHHHHHHHHhcC---cEEEEEecCC
Q psy2878 45 IFYFYPKDFTFVCPTE-ISEYNKLVKDFNERN---AILLGGSSDN 85 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~-~~~l~~l~~~~~~~~---~~vi~Is~d~ 85 (181)
|+.|+ +.|||.|... .+. +.+.+ +.+.-|..+.
T Consensus 27 Vvvf~-~~~Cp~C~~alk~~-------L~~~~~~~i~~~~vdid~ 63 (118)
T 3c1r_A 27 IFVAS-KTYCPYCHAALNTL-------FEKLKVPRSKVLVLQLND 63 (118)
T ss_dssp EEEEE-CSSCHHHHHHHHHH-------HTTSCCCGGGEEEEEGGG
T ss_pred EEEEE-cCCCcCHHHHHHHH-------HHHcCCCCCCeEEEECcc
Confidence 33444 8899999865 332 33444 6666666553
No 260
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.08 E-value=0.0028 Score=46.64 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=33.6
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEEEEEecC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~vi~Is~d 84 (181)
.++++|+-|| +.|||+|....|.+ .++.+++.+ ++.+.-+..+
T Consensus 112 ~~~~~vveFf-~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 112 AGAPQVLEFF-SFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp TTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCEEEEEE-CCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 4678899998 78999999998888 777777754 5777666654
No 261
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=94.84 E-value=0.46 Score=35.06 Aligned_cols=97 Identities=12% Similarity=0.066 Sum_probs=58.9
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
+.+.++.+|...||+.|....+.+.++.++++.+ +.++.|..+.... ..+.+.||+
T Consensus 130 ~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~~~~-----------------------~~~l~~fgl 185 (227)
T 4f9z_D 130 VIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGMKEN-----------------------GKVISFFKL 185 (227)
T ss_dssp SCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTSGGG-----------------------HHHHHHTTC
T ss_pred CCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCccHhH-----------------------HHHHHHcCC
Confidence 3345544444667888887788888888888754 6666666543211 123345665
Q ss_pred CCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhccC
Q psy2878 121 RHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQTG 167 (181)
Q Consensus 121 ~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~ 167 (181)
. +...|+..+++..+...|... . ..-..+.|.+.++.+..|
T Consensus 186 ~---~~~~P~~~i~~~~~~~ky~~~--~-~~~t~~~i~~Fv~~~~~G 226 (227)
T 4f9z_D 186 K---ESQLPALAIYQTLDDEWDTLP--T-AEVSVEHVQNFCDGFLSG 226 (227)
T ss_dssp C---GGGCSEEEEEESSSCCEEEET--T-CCCCHHHHHHHHHHHHTT
T ss_pred C---cccCCEEEEEECCCCccccCC--c-CCCCHHHHHHHHHHHhCC
Confidence 3 113568888886665455552 1 124678888888877655
No 262
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.74 E-value=0.15 Score=31.85 Aligned_cols=17 Identities=6% Similarity=0.032 Sum_probs=12.3
Q ss_pred eCCCCCCChhHHHHHHH
Q psy2878 50 PKDFTFVCPTEISEYNK 66 (181)
Q Consensus 50 ~~~~cp~C~~~~~~l~~ 66 (181)
.+.|||.|......|.+
T Consensus 18 ~~~~Cp~C~~~~~~L~~ 34 (92)
T 3ic4_A 18 GLSTCPHCKRTLEFLKR 34 (92)
T ss_dssp ECTTCHHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHH
Confidence 38899999876655544
No 263
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=94.12 E-value=0.16 Score=31.64 Aligned_cols=32 Identities=9% Similarity=0.113 Sum_probs=21.2
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
++.|+ +.|||.|....+.|.+ .++.+.-+..+
T Consensus 8 v~~y~-~~~C~~C~~~~~~L~~-------~~i~~~~vdv~ 39 (89)
T 2klx_A 8 IILYT-RPNCPYCKRARDLLDK-------KGVKYTDIDAS 39 (89)
T ss_dssp EEEES-CSCCTTTHHHHHHHHH-------HTCCEEEECSC
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 34444 8899999876655543 35666666666
No 264
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.00 E-value=0.1 Score=33.66 Aligned_cols=35 Identities=6% Similarity=-0.044 Sum_probs=22.0
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHH
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFV 88 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~ 88 (181)
+.|. ..|||.|......|.++ ++.+.-|..+....
T Consensus 19 ~vy~-~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~~~ 53 (99)
T 3qmx_A 19 EIYT-WSTCPFCMRALALLKRK-------GVEFQEYCIDGDNE 53 (99)
T ss_dssp EEEE-CTTCHHHHHHHHHHHHH-------TCCCEEEECTTCHH
T ss_pred EEEE-cCCChhHHHHHHHHHHC-------CCCCEEEEcCCCHH
Confidence 3344 88999998766555543 56666666665433
No 265
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=93.99 E-value=0.016 Score=37.43 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=15.4
Q ss_pred EEEEeeCCCCCCChhHHHHHHHH
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKL 67 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l 67 (181)
++.|+ +.|||.|....+.|.++
T Consensus 14 v~~f~-~~~C~~C~~~~~~L~~~ 35 (105)
T 1kte_A 14 VVVFI-KPTCPFCRKTQELLSQL 35 (105)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHS
T ss_pred EEEEE-cCCCHhHHHHHHHHHHc
Confidence 44455 88999998776666543
No 266
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=93.94 E-value=0.041 Score=39.76 Aligned_cols=38 Identities=5% Similarity=-0.130 Sum_probs=29.9
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
++++|+.|| ..|||+|....+.+.++.+++ ++.+.-+.
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p 59 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKMH 59 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEEE
T ss_pred CCCEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEEe
Confidence 578888888 779999999889999998888 34444443
No 267
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=93.53 E-value=0.013 Score=42.46 Aligned_cols=42 Identities=5% Similarity=0.017 Sum_probs=30.4
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEEEEEec
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAILLGGSS 83 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~vi~Is~ 83 (181)
.++++|+.|| ..|||+|....+.+ .++.+++.+ ++.++-+..
T Consensus 13 ~~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 57 (189)
T 3l9v_A 13 VDAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHV 57 (189)
T ss_dssp TTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEEC
T ss_pred CCCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEec
Confidence 3578888888 88999999888876 456555553 566666654
No 268
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.18 E-value=1.7 Score=36.23 Aligned_cols=111 Identities=11% Similarity=0.136 Sum_probs=65.1
Q ss_pred ccCccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCC-eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGK-WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk-~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
.+|..+|+.-+. .+| +.+++-|+-|. .+||.+ . . -........+.. ...++.+-.+
T Consensus 421 ~pG~r~p~~~l~----------~~~----~~~~~~dl~g~~f~ll~~--~---~-~~~~~~~~~~~~---~~~~~~~~~~ 477 (535)
T 3ihg_A 421 RPGFRGPHVLVS----------RHG----ERLSTVDLFGDGWTLLAG--E---L-GADWVAAAEAVS---AELGVPVRAY 477 (535)
T ss_dssp CTTSBCCCCEEE----------ETT----EEEEGGGGCSSSEEEEEC--T---T-CHHHHHHHHHHH---HHHTCCEEEE
T ss_pred CCCCcCCCceee----------cCC----ceeeHHHhcCCceEEEec--C---C-ccHHHHHHHHHH---HhcCCceEEE
Confidence 578889988875 246 77888888675 566653 1 1 111111112222 2235433333
Q ss_pred ecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q psy2878 82 SSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRIL 161 (181)
Q Consensus 82 s~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l 161 (181)
...+ + +.|..+.+++.|++. ....+||-|||.|.++.. ..+.....++.+++
T Consensus 478 ~~~~---------------~-----~~d~~~~~~~~~~~~------~~~~~lvRPD~~va~r~~--~~~~~~~~~l~~~~ 529 (535)
T 3ihg_A 478 RVGA---------------G-----LTDPESAVSERYGIG------KAGASLVRPDGIVAWRTD--EAAADAAQTLEGVL 529 (535)
T ss_dssp EBTT---------------T-----BBCSSCCHHHHHTCT------TTCEEEECTTSBEEEEES--SCCSSHHHHHHHHH
T ss_pred EeCC---------------c-----cccCcchHHHHhCCC------CCceEeeCCCceeEEecC--CCCCCHHHHHHHHH
Confidence 3322 1 457788999999985 246899999999999983 22333344555555
Q ss_pred Hhh
Q psy2878 162 DAI 164 (181)
Q Consensus 162 ~~l 164 (181)
..+
T Consensus 530 ~~~ 532 (535)
T 3ihg_A 530 RRV 532 (535)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 269
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=92.89 E-value=2.8 Score=36.20 Aligned_cols=138 Identities=14% Similarity=0.160 Sum_probs=79.7
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCC-CC--CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHh-----
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESS-FP--GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNE----- 73 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~-~~--gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~----- 73 (181)
+.+|..+|++.+.. ..+| ++++|.+ +. |+++||.|- +. .........+.++.+.+..
T Consensus 479 ~~~G~r~p~~~~~~--------~~~g----~~~~l~~~l~~~g~~~ll~~~-~~--~~~~~~~~~~~~~~~~l~~~~~~~ 543 (665)
T 1pn0_A 479 CVVGTRFKSQPVVR--------HSEG----LWMHFGDRLVTDGRFRIIVFA-GK--ATDATQMSRIKKFAAYLDSENSVI 543 (665)
T ss_dssp SCTTSBCCCCEEEE--------TTTT----EEEEGGGGCCCSSCEEEEEEE-EC--TTSHHHHHHHHHHHHHHHSTTSHH
T ss_pred CCCcCCCCCCeEEe--------cCCC----cEEEHhHhhccCCCEEEEEec-CC--cccchhHHHHHHHHHHhhccccHH
Confidence 35799999998862 2477 8888877 43 688888874 22 1112334555555555531
Q ss_pred -----------cCcEEEEEecCCHHHHHHHHHHcCC-Cc--ccc-eeEEEc------CCchHHHHhCCCCCCCcceeeEE
Q psy2878 74 -----------RNAILLGGSSDNEFVKLAWRRENSN-LY--KLN-HWQFSD------TNGSLIDQLGIRHETGVALRATF 132 (181)
Q Consensus 74 -----------~~~~vi~Is~d~~~~~~~~~~~~~~-~~--~~~-~~~~~D------~~~~~~~~~gv~~~~g~~~p~~~ 132 (181)
.-+.++.|...+.... + ...... .. +.. ..++.| ..+.+++.||+... ..+.+
T Consensus 544 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-~~~~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~----~g~~v 617 (665)
T 1pn0_A 544 SRYTPKGADRNSRIDVITIHSCHRDDI-E-MHDFPAPALHPKWQYDFIYADCDSWHHPHPKSYQAWGVDET----KGAVV 617 (665)
T ss_dssp HHHSBTTSCTTSSEEEEEEESSCTTSC-C-GGGSCTTTTSCTTCCSSEEECSCCSSSCCCCHHHHHTBCTT----TCEEE
T ss_pred hhcCCcccCccceeEEEEEecCCCCcc-c-hhhCCHHHcCcccchheEeecCcccccccccHHHHcCCCCC----CceEE
Confidence 1267777754432111 0 001100 00 001 345667 34679999997411 24779
Q ss_pred EEcCCCcEEEEEeccCCCCCCHHHHHHHHHhhc
Q psy2878 133 IFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165 (181)
Q Consensus 133 liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~l~ 165 (181)
||-|||.|.++.. ..+.+++.+.+....
T Consensus 618 lvRPD~yV~~~~~-----~~~~~~l~~~~~~~~ 645 (665)
T 1pn0_A 618 VVRPDGYTSLVTD-----LEGTAEIDRYFSGIL 645 (665)
T ss_dssp EECTTSBEEEEEC-----TTTHHHHHHHHHTTB
T ss_pred EECCCCcEEEEec-----cccHHHHHHHHHHHh
Confidence 9999999998772 234677777776654
No 270
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=92.86 E-value=0.15 Score=32.94 Aligned_cols=27 Identities=4% Similarity=-0.308 Sum_probs=17.9
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 52 DFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 52 ~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
.|||.|....+.|.++ ++.+.-+..+.
T Consensus 30 ~~C~~C~~~~~~L~~~-------~i~~~~vdi~~ 56 (105)
T 2yan_A 30 AKCGFSKQILEILNST-------GVEYETFDILE 56 (105)
T ss_dssp BCTTHHHHHHHHHHHH-------TCCCEEEEGGG
T ss_pred CCCccHHHHHHHHHHC-------CCCeEEEECCC
Confidence 8999998666555443 56666666553
No 271
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=92.51 E-value=0.63 Score=29.22 Aligned_cols=41 Identities=5% Similarity=-0.125 Sum_probs=21.9
Q ss_pred eCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHH
Q psy2878 50 PKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLA 91 (181)
Q Consensus 50 ~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~ 91 (181)
..++||.|. ....=.+..+.+.+.|+.+.-+..+.....++
T Consensus 8 ~~~~C~~c~-~~~~~~~ak~~L~~~~i~~~~~di~~~~~~~~ 48 (93)
T 1t1v_A 8 STSVTGSRE-IKSQQSEVTRILDGKRIQYQLVDISQDNALRD 48 (93)
T ss_dssp ECSSCSCHH-HHHHHHHHHHHHHHTTCCCEEEETTSCHHHHH
T ss_pred EcCCCCCch-hhHHHHHHHHHHHHCCCceEEEECCCCHHHHH
Confidence 378999993 11111123333555677777777654333333
No 272
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=92.48 E-value=0.15 Score=33.37 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=19.0
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
|+.|+ ..|||.|....+.|.+ .++.+--+..+
T Consensus 21 v~vy~-~~~Cp~C~~~~~~L~~-------~~i~~~~~di~ 52 (113)
T 3rhb_A 21 VVIYS-KTWCSYCTEVKTLFKR-------LGVQPLVVELD 52 (113)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCCeEEEee
Confidence 33344 8899999866655543 35554445444
No 273
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=92.43 E-value=0.11 Score=33.51 Aligned_cols=22 Identities=9% Similarity=0.143 Sum_probs=15.0
Q ss_pred EEEEeeCCCCCCChhHHHHHHHH
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKL 67 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l 67 (181)
++.|+ +.|||.|....+.|.++
T Consensus 24 v~ly~-~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 24 VIMYG-LSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHH
T ss_pred EEEEc-CCCCchHHHHHHHHHHc
Confidence 44444 88999998776655543
No 274
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=92.31 E-value=0.19 Score=30.47 Aligned_cols=29 Identities=10% Similarity=0.072 Sum_probs=18.7
Q ss_pred eCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 50 PKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 50 ~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
.+.|||.|......|.+ .++.+.-+..+.
T Consensus 7 ~~~~C~~C~~~~~~l~~-------~~i~~~~~~i~~ 35 (82)
T 1fov_A 7 TKETCPYCHRAKALLSS-------KGVSFQELPIDG 35 (82)
T ss_dssp ECSSCHHHHHHHHHHHH-------HTCCCEEEECTT
T ss_pred ECCCChhHHHHHHHHHH-------CCCCcEEEECCC
Confidence 37899999876655543 256555555553
No 275
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=91.89 E-value=0.41 Score=31.12 Aligned_cols=28 Identities=4% Similarity=-0.250 Sum_probs=19.4
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCH
Q psy2878 52 DFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNE 86 (181)
Q Consensus 52 ~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~ 86 (181)
.|||.|......|. +.++.+.-|..+..
T Consensus 28 ~~Cp~C~~ak~~L~-------~~~i~~~~vdi~~~ 55 (109)
T 1wik_A 28 AKCGFSKQILEILN-------STGVEYETFDILED 55 (109)
T ss_dssp CCSSTHHHHHHHHH-------HTCSCEEEEESSSC
T ss_pred CCCchHHHHHHHHH-------HcCCCeEEEECCCC
Confidence 89999986554443 44777777777653
No 276
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=91.84 E-value=0.22 Score=31.02 Aligned_cols=33 Identities=6% Similarity=0.045 Sum_probs=20.8
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
++.|+ ..|||.|+...+.|. +.++.+.-+..+.
T Consensus 8 v~ly~-~~~C~~C~~~~~~L~-------~~~i~~~~~di~~ 40 (92)
T 2khp_A 8 VIIYT-RPGCPYCARAKALLA-------RKGAEFNEIDASA 40 (92)
T ss_dssp EEEEE-CTTCHHHHHHHHHHH-------HTTCCCEEEESTT
T ss_pred EEEEE-CCCChhHHHHHHHHH-------HcCCCcEEEECCC
Confidence 33444 789999986555444 3466666666664
No 277
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=91.42 E-value=0.36 Score=31.71 Aligned_cols=29 Identities=7% Similarity=-0.070 Sum_probs=18.1
Q ss_pred eeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 49 YPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 49 ~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
|..+|||.|......|.+ .|+.+-.+..|
T Consensus 22 y~~~~Cp~C~~ak~~L~~-------~~i~~~~~dvd 50 (114)
T 3h8q_A 22 FSKSYCPHSTRVKELFSS-------LGVECNVLELD 50 (114)
T ss_dssp EECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEcCCCCcHHHHHHHHHH-------cCCCcEEEEec
Confidence 348899999765544443 35555555555
No 278
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=90.75 E-value=2.8 Score=32.15 Aligned_cols=38 Identities=13% Similarity=0.260 Sum_probs=24.9
Q ss_pred EEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 44 KIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 44 ~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
+.|..|.+.+||.|+.--..|.++..+ .++..+.+..+
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v~ 81 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYHVD 81 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEECS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEEEE
Confidence 555556688999999777777766543 35544455543
No 279
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.20 E-value=2.2 Score=27.79 Aligned_cols=44 Identities=5% Similarity=-0.079 Sum_probs=25.1
Q ss_pred eCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHH
Q psy2878 50 PKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRR 94 (181)
Q Consensus 50 ~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~ 94 (181)
..++||.|.. ...-+++.+.+++.++.+.-|..+.....++.+.
T Consensus 14 ~~~~C~~C~~-~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~ 57 (111)
T 2ct6_A 14 IASSSGFVAI-KKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMY 57 (111)
T ss_dssp ECSSCSCHHH-HHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHH
T ss_pred EcCCCCCccc-chhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHH
Confidence 3789999972 1112233334556678887777765444444343
No 280
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=89.03 E-value=0.13 Score=37.22 Aligned_cols=41 Identities=12% Similarity=0.166 Sum_probs=30.2
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHH---HHHHHHHHhcCcEEEEEe
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEY---NKLVKDFNERNAILLGGS 82 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l---~~l~~~~~~~~~~vi~Is 82 (181)
.++++|+.|+ ..+||+|....+.+ .++.+++.+ ++.++-+.
T Consensus 20 ~~~~~vvef~-d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~ 63 (191)
T 3l9s_A 20 AGEPQVLEFF-SFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYH 63 (191)
T ss_dssp CSSSCEEEEE-CTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEE
T ss_pred CCCCeEEEEE-CCCChhHHHhChhccchHHHHHhCCC-CcEEEEEe
Confidence 4578888887 77899999888876 577777764 46665554
No 281
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=88.91 E-value=0.43 Score=33.94 Aligned_cols=43 Identities=2% Similarity=-0.058 Sum_probs=31.9
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHH-HHHHHHHHhcCcEEEEEecC
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEY-NKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l-~~l~~~~~~~~~~vi~Is~d 84 (181)
.++++++.|| ...||.|....+.+ .++.+++.. .+.+..+...
T Consensus 16 ~~~~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVF-SYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEECT
T ss_pred CCCcEEEEEE-eCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEecC
Confidence 3567788887 58899999888888 888777653 4666666543
No 282
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=88.60 E-value=0.66 Score=30.95 Aligned_cols=65 Identities=9% Similarity=0.059 Sum_probs=41.9
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec--C--CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS--D--NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~--d--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
+.+|...+|+.|+.... .++++|+.+-.+.. + +.+.+.++.... +.++.-+....+...+..+..
T Consensus 2 i~iY~~~~C~~c~ka~~-------~L~~~gi~~~~~di~~~~~~~~el~~~l~~~----~~~~~~l~n~~~~~~k~l~~~ 70 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARA-------WLNRHDVVFQEHNIMTSPLSRDELLKILSYT----ENGTEDIISTRSKVFQKLDID 70 (120)
T ss_dssp EEEEECSSCHHHHHHHH-------HHHHTTCCEEEEETTTSCCCHHHHHHHHHHC----SSTHHHHBCTTCHHHHHTTCC
T ss_pred EEEEeCCCCHHHHHHHH-------HHHHcCCCeEEEecccCCCcHHHHHHHHhhc----CCCHHHhhcCCcHHHHHcCCC
Confidence 34555778999975543 34556776666654 3 367778888765 555555566677777777653
No 283
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=88.51 E-value=2.5 Score=28.38 Aligned_cols=47 Identities=9% Similarity=0.017 Sum_probs=27.5
Q ss_pred EeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHH
Q psy2878 48 FYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRE 95 (181)
Q Consensus 48 F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~ 95 (181)
.|.++.||.|.. ...=.+...-+..+|+.+--|..+.....++++.+
T Consensus 4 vYtt~~c~~c~~-kk~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~ 50 (121)
T 1u6t_A 4 VYIASSSGSTAI-KKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRE 50 (121)
T ss_dssp EEECTTCSCHHH-HHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHH
T ss_pred EEecCCCCCccc-hHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHH
Confidence 344888999931 11222333446777888888887654444554544
No 284
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=87.92 E-value=0.55 Score=36.23 Aligned_cols=40 Identities=10% Similarity=0.127 Sum_probs=29.5
Q ss_pred CCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q psy2878 40 PGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS 83 (181)
Q Consensus 40 ~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~ 83 (181)
.|+.+|+.|+ -..||+|+...+.+.+..+ +-.+.++.+..
T Consensus 146 ~gk~~I~vFt-Dp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVS-DPMCPHCQKELTKLRDHLK---ENTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEE-CTTCHHHHHHHHTHHHHHH---HCEEEEEECCC
T ss_pred CCCeEEEEEE-CcCChhHHHHHHHHHHHhh---CCcEEEEEeec
Confidence 3678888887 6679999999998887654 34566666654
No 285
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=87.69 E-value=0.91 Score=30.31 Aligned_cols=64 Identities=17% Similarity=0.225 Sum_probs=41.9
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec--C--CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS--D--NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~--d--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
+.+|...+|+.|+....- ++++|+.+-.+.. + +.+.+.+|.... +.++.-+....+...+..+.
T Consensus 5 i~iY~~~~C~~c~ka~~~-------L~~~gi~~~~~di~~~~~~~~eL~~~l~~~----g~~~~~l~n~~~~~~k~l~l 72 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAE-------LDDLAWDYDAIDIKKNPPAASLIRNWLENS----GLELKKFFNTSGQSYRALGL 72 (120)
T ss_dssp EEEEECSSCHHHHHHHHH-------HHHHTCCEEEEETTTSCCCHHHHHHHHHHS----CCCGGGGBCTTSHHHHHTTH
T ss_pred EEEEeCCCChHHHHHHHH-------HHHcCCceEEEEeccCchhHHHHHHHHHHc----CCCHHHHhCCCCcchhhcCc
Confidence 455657789999855533 4455666655543 3 367888888876 66666566667777777664
No 286
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=87.56 E-value=1.1 Score=27.61 Aligned_cols=29 Identities=10% Similarity=-0.100 Sum_probs=18.3
Q ss_pred eeCC----CCCCChhHHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 49 YPKD----FTFVCPTEISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 49 ~~~~----~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
|... +||.|...... +++.|+.+--+..+
T Consensus 5 Y~~~~~~~~Cp~C~~ak~~-------L~~~gi~y~~idI~ 37 (87)
T 1aba_A 5 YGYDSNIHKCGPCDNAKRL-------LTVKKQPFEFINIM 37 (87)
T ss_dssp EECCTTTSCCHHHHHHHHH-------HHHTTCCEEEEESC
T ss_pred EEeCCCCCcCccHHHHHHH-------HHHcCCCEEEEEee
Confidence 4478 89999754433 34456766666665
No 287
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=87.46 E-value=0.96 Score=27.52 Aligned_cols=19 Identities=11% Similarity=0.113 Sum_probs=12.4
Q ss_pred EEEeeCCCCCCChhHHHHH
Q psy2878 46 FYFYPKDFTFVCPTEISEY 64 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l 64 (181)
+.+|...|||.|......|
T Consensus 6 v~ly~~~~Cp~C~~~~~~L 24 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWF 24 (89)
T ss_dssp EEEEECTTCHHHHHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHH
Confidence 3344488999998655444
No 288
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=87.14 E-value=1.1 Score=37.77 Aligned_cols=52 Identities=8% Similarity=0.210 Sum_probs=40.5
Q ss_pred HHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEE
Q psy2878 88 VKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHIT 144 (181)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~ 144 (181)
..++.+..+.....+.++.+.|.+..+.+.||+. ..|+.++++++|++....
T Consensus 171 ~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~-----~~Pslvl~~~nGk~~~~~ 222 (519)
T 3t58_A 171 LGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVT-----DFPSCYLLLRNGSVSRVP 222 (519)
T ss_dssp HHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCC-----CSSEEEEEETTSCEEECC
T ss_pred HHHHHHHHhhccCCeeEEEecCchHHHHHHcCCC-----CCCeEEEEeCCCceeecc
Confidence 4455555654445677888888889999999997 568999999999987665
No 289
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=86.83 E-value=0.86 Score=30.84 Aligned_cols=63 Identities=10% Similarity=0.038 Sum_probs=38.6
Q ss_pred EEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec--CC--HHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 47 YFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS--DN--EFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 47 ~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~--d~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
.+|...+|+.|......| .+.|+.+-.+.. ++ .+.+.++.... +.++.-+....+...+..+.
T Consensus 4 ~lY~~~~C~~C~ka~~~L-------~~~gi~y~~~di~~~~~~~~el~~~l~~~----~~~~~~l~n~~~~~~k~l~~ 70 (132)
T 1z3e_A 4 TLYTSPSCTSCRKARAWL-------EEHEIPFVERNIFSEPLSIDEIKQILRMT----EDGTDEIISTRSKVFQKLNV 70 (132)
T ss_dssp EEEECTTCHHHHHHHHHH-------HHTTCCEEEEETTTSCCCHHHHHHHHHTC----SSCGGGTBCTTSHHHHHHCC
T ss_pred EEEeCCCChHHHHHHHHH-------HHcCCceEEEEccCCCccHHHHHHHHHHc----CCCHHHhhcCCchHHHhcCc
Confidence 345578899998555433 345776655554 32 46667776654 45555555666777777664
No 290
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=86.77 E-value=3.2 Score=35.57 Aligned_cols=139 Identities=12% Similarity=0.172 Sum_probs=73.7
Q ss_pred ccCccCCCcEEecccCCCCCCCCCcccceeeeecCCC---CCCeEEEEEeeCCCCCCCh-hHHHHHHHHH--------HH
Q psy2878 3 TIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSF---PGKWKIFYFYPKDFTFVCP-TEISEYNKLV--------KD 70 (181)
Q Consensus 3 ~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~---~gk~~ll~F~~~~~cp~C~-~~~~~l~~l~--------~~ 70 (181)
.+|..+|+..+.. ..+| ++++|.++ .|+++||.|- +...+.+. ..+..+.+.. ..
T Consensus 468 ~~G~r~p~~~~~~--------~~~g----~~~~l~~~~~~~g~~~ll~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 534 (639)
T 2dkh_A 468 TVGMRFHSAPVVR--------VCDA----KPVQLGHCGKADGRWRLYAFA-AQNDLAQPESGLLALCRFLEGDAASPLRR 534 (639)
T ss_dssp CTTSBCCCCEEEE--------TTTC----CEEEGGGGCCSSSCEEEEEEC-CTTTTTCTTSHHHHHHHHHHHCTTCHHHH
T ss_pred CCcCCCCCCeEEe--------cCCC----CEEEHHHhhccCCCEEEEEec-CCCCchhhHHHHHHHHHHHhhCCccHHHh
Confidence 4799999998862 2467 78888774 3688888874 32233333 2333333222 12
Q ss_pred HHhc------CcEEEEEecCCHHHH--HH---HHHHcCCCccc-c-eeEEEcCC----chHHHHhCCCCCCCcceeeEEE
Q psy2878 71 FNER------NAILLGGSSDNEFVK--LA---WRRENSNLYKL-N-HWQFSDTN----GSLIDQLGIRHETGVALRATFI 133 (181)
Q Consensus 71 ~~~~------~~~vi~Is~d~~~~~--~~---~~~~~~~~~~~-~-~~~~~D~~----~~~~~~~gv~~~~g~~~p~~~l 133 (181)
|... -+.++.|...+.... .. .........+. . ..++.|.. +.+.+.||+... ..+.+|
T Consensus 535 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~----~g~~v~ 610 (639)
T 2dkh_A 535 FTPAGQDIDSIFDLRAVFPQAYTEVALETLPALLLPPKGQLGMIDYEKVFSPDLKNAGQDIFELRGIDRQ----QGALVV 610 (639)
T ss_dssp HSCTTSCTTSSEEEEEECSSCGGGCCGGGSCGGGSCEETTTTEECCCSEEECCCSSTTCCHHHHTTBCTT----TCEEEE
T ss_pred cCCCCCCcCceEEEEEEecCCCCccchhhCcHhhCCcccccccccceeEEeCCCcccccchHHHhCCCCC----ceEEEE
Confidence 3111 257777754432110 00 00000000011 1 35667732 568888997411 247899
Q ss_pred EcCCCcEEEEEeccCCCCCCHHHHHHHHHh
Q psy2878 134 FDPQNIIQHITVNNLNVGRNPIETLRILDA 163 (181)
Q Consensus 134 iD~~g~i~~~~~~~~~~~~~~~~ll~~l~~ 163 (181)
|-|||.|-++.. ..+.+.+.+.+..
T Consensus 611 vRPD~yv~~~~~-----~~~~~~l~~~~~~ 635 (639)
T 2dkh_A 611 VRPDQYVAQVLP-----LGDHAALSAYFES 635 (639)
T ss_dssp ECTTSBEEEEEC-----TTCHHHHHHHHHT
T ss_pred ECCCCceEEeec-----hhhHHHHHHHHHH
Confidence 999999987762 1345555555543
No 291
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=86.07 E-value=0.66 Score=31.74 Aligned_cols=27 Identities=0% Similarity=-0.256 Sum_probs=16.8
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 52 DFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 52 ~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
.|||.|......| .+.|+.+..|..+.
T Consensus 48 ~~Cp~C~~ak~~L-------~~~gv~y~~vdI~~ 74 (135)
T 2wci_A 48 PSCGFSAQAVQAL-------AACGERFAYVDILQ 74 (135)
T ss_dssp BSSHHHHHHHHHH-------HTTCSCCEEEEGGG
T ss_pred CCCccHHHHHHHH-------HHcCCceEEEECCC
Confidence 6899887544433 34467666666653
No 292
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=85.98 E-value=1.7 Score=28.86 Aligned_cols=43 Identities=2% Similarity=-0.160 Sum_probs=21.6
Q ss_pred CeEEEEEeeC---CCCCCChhHHHHHHHHHHHHHhcCcE---EEEEecCCHHHHHH
Q psy2878 42 KWKIFYFYPK---DFTFVCPTEISEYNKLVKDFNERNAI---LLGGSSDNEFVKLA 91 (181)
Q Consensus 42 k~~ll~F~~~---~~cp~C~~~~~~l~~l~~~~~~~~~~---vi~Is~d~~~~~~~ 91 (181)
..++|+.-.+ .|||.|......|.+ .|+. +.-+..+.....++
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~~~~dv~~~~~~~~ 64 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGN-------QGVDPAKFAAYNVLEDPELRE 64 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHH-------HTBCGGGEEEEECTTCHHHHH
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHH-------cCCCcceEEEEEecCCHHHHH
Confidence 3455554311 288888755544433 3555 55555544333333
No 293
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=85.77 E-value=0.85 Score=30.46 Aligned_cols=64 Identities=19% Similarity=0.133 Sum_probs=40.8
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec--C--CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS--D--NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~--d--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
|.+|...+|+.|+.... .++++|+.+-.+.. + +.+.+.+|.... +.++.-+....+...+.++.
T Consensus 6 i~iY~~p~C~~c~ka~~-------~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~----g~~~~~l~n~~~~~~k~l~l 73 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKK-------WLIENNIEYTNRLIVDDNPTVEELKAWIPLS----GLPVKKFFNTSGVVYKELKL 73 (120)
T ss_dssp CEEEECTTCHHHHHHHH-------HHHHTTCCCEEEETTTTCCCHHHHHHHHHHH----TSCGGGGBCTTSHHHHHTTH
T ss_pred EEEEECCCChHHHHHHH-------HHHHcCCceEEEecccCcCCHHHHHHHHHHc----CCCHHHeEeCCCchhhhcCc
Confidence 44555778999975553 34455665555543 4 467888888876 65555556666777776663
No 294
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=85.68 E-value=0.96 Score=30.47 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=10.6
Q ss_pred EEEEeeCCCCCCChhH
Q psy2878 45 IFYFYPKDFTFVCPTE 60 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~ 60 (181)
|++|+ ..|||.|...
T Consensus 39 Vvvy~-~~~Cp~C~~a 53 (129)
T 3ctg_A 39 VFVAA-KTYCPYCKAT 53 (129)
T ss_dssp EEEEE-CTTCHHHHHH
T ss_pred EEEEE-CCCCCchHHH
Confidence 34444 8899999855
No 295
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=85.29 E-value=0.96 Score=29.42 Aligned_cols=26 Identities=8% Similarity=-0.110 Sum_probs=15.2
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 53 FTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 53 ~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
+||.|...... +.+.|+.+-.+..+.
T Consensus 32 ~Cp~C~~ak~~-------L~~~gi~~~~~dI~~ 57 (109)
T 3ipz_A 32 MCGFSNTVVQI-------LKNLNVPFEDVNILE 57 (109)
T ss_dssp SSHHHHHHHHH-------HHHTTCCCEEEEGGG
T ss_pred CChhHHHHHHH-------HHHcCCCcEEEECCC
Confidence 78888754433 334466666666543
No 296
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=85.13 E-value=0.92 Score=29.73 Aligned_cols=35 Identities=6% Similarity=-0.101 Sum_probs=20.6
Q ss_pred CeEEEEEeeC-----CCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCC
Q psy2878 42 KWKIFYFYPK-----DFTFVCPTEISEYNKLVKDFNERNAILLGGSSDN 85 (181)
Q Consensus 42 k~~ll~F~~~-----~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~ 85 (181)
.+++|+. . .+||.|.....-|. +.|+.+.-+..+.
T Consensus 16 ~~Vvlf~--kg~~~~~~Cp~C~~ak~~L~-------~~gi~y~~~di~~ 55 (111)
T 3zyw_A 16 APCMLFM--KGTPQEPRCGFSKQMVEILH-------KHNIQFSSFDIFS 55 (111)
T ss_dssp SSEEEEE--SBCSSSBSSHHHHHHHHHHH-------HTTCCCEEEEGGG
T ss_pred CCEEEEE--ecCCCCCcchhHHHHHHHHH-------HcCCCeEEEECcC
Confidence 4465554 4 78999975554333 4466665565543
No 297
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=84.82 E-value=3.1 Score=32.94 Aligned_cols=105 Identities=8% Similarity=0.028 Sum_probs=59.2
Q ss_pred eEEEEEeeCCCCCCChhHHHHHHHHHHHHHhc-CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 43 WKIFYFYPKDFTFVCPTEISEYNKLVKDFNER-NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 43 ~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~-~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
..++.|+ ..+|+.|...+..|.++.++++.+ .+.++-|..+.......+ +.+.||+.
T Consensus 249 ~~~~~f~-~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~---------------------~~~~fgl~ 306 (367)
T 3us3_A 249 IHIVAFA-EEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPY---------------------WEKTFDID 306 (367)
T ss_dssp EEEEEEC-CTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHH---------------------HHHHHTCC
T ss_pred cEEEEEE-cCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHH---------------------HHHhcCCC
Confidence 4455565 444555666667777777777764 356655554431111111 12346663
Q ss_pred CCCCcceeeEEEEcCCCc--EEEEEeccCCCCCCHHHHHHHHHhhccCCccccCC
Q psy2878 122 HETGVALRATFIFDPQNI--IQHITVNNLNVGRNPIETLRILDAIQTGKLCACNR 174 (181)
Q Consensus 122 ~~~g~~~p~~~liD~~g~--i~~~~~~~~~~~~~~~~ll~~l~~l~~~~~~~~~~ 174 (181)
...|+..+++.... ..|.. ......-..+.|.+.++.+..|+..|.+-
T Consensus 307 ----~~~P~~~i~~~~~~~~~~y~~-~~~~~~~t~~~i~~F~~~~~~Gkl~p~~~ 356 (367)
T 3us3_A 307 ----LSAPQIGVVNVTDADSVWMEM-DDEEDLPSAEELEDWLEDVLEGEINTEDD 356 (367)
T ss_dssp ----TTSCEEEEEETTTCCEEECCC-CTTSCCCCHHHHHHHHHHHHHTSSCC---
T ss_pred ----CCCCeEEEEecccccceeecC-CcccccCCHHHHHHHHHHHHcCCcCcccc
Confidence 13578889986644 23323 11122457889999999999998888664
No 298
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=83.25 E-value=1.6 Score=29.00 Aligned_cols=32 Identities=0% Similarity=-0.284 Sum_probs=16.9
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCcE-EEEEecCCHHHHHH
Q psy2878 53 FTFVCPTEISEYNKLVKDFNERNAI-LLGGSSDNEFVKLA 91 (181)
Q Consensus 53 ~cp~C~~~~~~l~~l~~~~~~~~~~-vi~Is~d~~~~~~~ 91 (181)
+||.|......| .+.++. +--+..+.....++
T Consensus 34 ~Cp~C~~ak~lL-------~~~gv~~~~~vdV~~d~~~~~ 66 (118)
T 2wem_A 34 QCGFSNAVVQIL-------RLHGVRDYAAYNVLDDPELRQ 66 (118)
T ss_dssp SSHHHHHHHHHH-------HHTTCCCCEEEESSSCHHHHH
T ss_pred ccHHHHHHHHHH-------HHcCCCCCEEEEcCCCHHHHH
Confidence 788886544333 334663 55666554333333
No 299
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=80.71 E-value=11 Score=25.80 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=25.0
Q ss_pred ceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHh
Q psy2878 127 ALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDA 163 (181)
Q Consensus 127 ~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~~ 163 (181)
+.|+.-|+ +||++++..--..-.++..+.|.+.|..
T Consensus 106 SSPS~ALf-KdGelVh~ieRh~IEGr~a~~Ia~~L~~ 141 (147)
T 3fhk_A 106 SSPSMALL-KGKEVVHFIPRHEIEGHDMEEIMKNLTA 141 (147)
T ss_dssp CSSEEEEE-ETTEEEEEECGGGTTTSCHHHHHHHHHH
T ss_pred CCchheee-eCCEEEEEeehhhcCCCCHHHHHHHHHH
Confidence 46777788 7999998874222335677777776654
No 300
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=80.61 E-value=1.2 Score=30.71 Aligned_cols=64 Identities=8% Similarity=-0.040 Sum_probs=40.3
Q ss_pred EEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec--C--CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 47 YFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS--D--NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 47 ~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~--d--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
.+|...+|+.|+... +.++++|+.+-.+.. + +.+.+.++.... +.+..-+....+...+.++..
T Consensus 5 tiY~~p~C~~crkak-------~~L~~~gi~~~~idi~~~~~~~~eL~~~~~~~----g~p~~~l~n~~~~~yk~l~l~ 72 (141)
T 1s3c_A 5 TIYHNPASGTSRNTL-------EMIRNSGTEPTIILYLENPPSRDELVKLIADM----GISVRALLRKNVEPYEQLGLA 72 (141)
T ss_dssp EEECCTTCHHHHHHH-------HHHHHTTCCCEEECTTTSCCCHHHHHHHHHHH----TSCHHHHBCSSSHHHHHTTTT
T ss_pred EEEECCCChHHHHHH-------HHHHHcCCCEEEEECCCCCccHHHHHHHhccc----CCCHHHhccCCchhHHhcCCc
Confidence 355577898887544 334556776655654 3 356777777765 555444455677777777754
No 301
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=80.55 E-value=0.28 Score=24.13 Aligned_cols=21 Identities=14% Similarity=0.177 Sum_probs=17.9
Q ss_pred CCCCChhHHHHHHHHHHHHHh
Q psy2878 53 FTFVCPTEISEYNKLVKDFNE 73 (181)
Q Consensus 53 ~cp~C~~~~~~l~~l~~~~~~ 73 (181)
-||.|..++|.++.+..-|++
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 499999999999988877764
No 302
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=79.73 E-value=1.7 Score=28.97 Aligned_cols=65 Identities=8% Similarity=-0.063 Sum_probs=40.9
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec--C--CHHHHHHHHHHcCCCccc-ceeEEEcCCchHHHHhCC
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS--D--NEFVKLAWRRENSNLYKL-NHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~--d--~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~gv 120 (181)
+.+|....|+.|+... +.++++|+.+-.+.. + +.+.+.+|.... +. +..-+....+...+.++.
T Consensus 7 i~iY~~p~C~~c~ka~-------~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~----g~~~~~~l~n~~~~~~k~l~l 75 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETL-------ALVEQQGITPQVVLYLETPPSVDKLKELLQQL----GFSDARQLMRTKEDLYKTLNL 75 (121)
T ss_dssp CEEECCTTCHHHHHHH-------HHHHTTTCCCEEECTTTSCCCHHHHHHHHHHT----TCSSGGGGBCTTSHHHHHTTT
T ss_pred EEEEECCCCHHHHHHH-------HHHHHcCCCcEEEeeccCCCcHHHHHHHHHhc----CCcCHHHHhcCCChhhhhcCc
Confidence 3455577888887544 334556766555543 3 367888888876 54 433355667778888775
Q ss_pred C
Q psy2878 121 R 121 (181)
Q Consensus 121 ~ 121 (181)
.
T Consensus 76 ~ 76 (121)
T 3rdw_A 76 D 76 (121)
T ss_dssp T
T ss_pred c
Confidence 4
No 303
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=79.73 E-value=1.1 Score=32.18 Aligned_cols=41 Identities=12% Similarity=0.026 Sum_probs=28.2
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
++.+|+.|+ --.||.|....+.+.++.+++....+.++.-.
T Consensus 14 a~vtiv~f~-D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 14 GPRLFEVFL-EPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp CSEEEEEEE-CTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCEEEEEEE-CCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 455666665 66799999988888887777622346666544
No 304
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=79.38 E-value=1.4 Score=29.66 Aligned_cols=16 Identities=6% Similarity=-0.195 Sum_probs=11.2
Q ss_pred CCCCCCChhHHHHHHH
Q psy2878 51 KDFTFVCPTEISEYNK 66 (181)
Q Consensus 51 ~~~cp~C~~~~~~l~~ 66 (181)
.+|||.|......|.+
T Consensus 21 k~~Cp~C~~ak~lL~~ 36 (127)
T 3l4n_A 21 KSTCSYSKGMKELLEN 36 (127)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred cCCCccHHHHHHHHHH
Confidence 7899999766544443
No 305
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=78.51 E-value=1.1 Score=29.51 Aligned_cols=43 Identities=9% Similarity=-0.031 Sum_probs=27.1
Q ss_pred EEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecC----CHHHHHHHHHHc
Q psy2878 47 YFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSD----NEFVKLAWRREN 96 (181)
Q Consensus 47 ~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d----~~~~~~~~~~~~ 96 (181)
.+|...+|+.|+.... .++++|+.+-.+... +.+.+++|.++.
T Consensus 3 ~iY~~~~C~~C~kak~-------~L~~~gi~~~~~di~~~~~~~~~l~~~~~~~ 49 (114)
T 1rw1_A 3 VLYGIKACDTMKKART-------WLDEHKVAYDFHDYKAVGIDREHLRRWCAEH 49 (114)
T ss_dssp EEEECSSCHHHHHHHH-------HHHHTTCCEEEEEHHHHCCCHHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHH-------HHHHCCCceEEEeecCCCCCHHHHHHHHHhC
Confidence 3455788999975443 344467776666543 246777777765
No 306
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=77.92 E-value=2.2 Score=30.10 Aligned_cols=41 Identities=15% Similarity=0.030 Sum_probs=27.7
Q ss_pred CCeEEEEEeeCCCCCCChhHHHHH-HHHHHHHHhc-CcEEEEEe
Q psy2878 41 GKWKIFYFYPKDFTFVCPTEISEY-NKLVKDFNER-NAILLGGS 82 (181)
Q Consensus 41 gk~~ll~F~~~~~cp~C~~~~~~l-~~l~~~~~~~-~~~vi~Is 82 (181)
++.+|+.|+ ...||.|....+.+ .++.++|.+. ++.++-..
T Consensus 11 a~~~i~~f~-D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 11 GKPLVVVYG-DYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp CCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCeEEEEEE-CCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 466666665 66799999888887 4566677542 46665443
No 307
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=77.28 E-value=2.4 Score=28.18 Aligned_cols=65 Identities=8% Similarity=-0.044 Sum_probs=41.2
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe--c--CCHHHHHHHHHHcCCCcccc-eeEEEcCCchHHHHhCC
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS--S--DNEFVKLAWRRENSNLYKLN-HWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is--~--d~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~gv 120 (181)
+.+|....|+.|+....- ++++|+.+-.+. . -+.+.+.+|.... +.+ ..-+....+...+.++.
T Consensus 6 i~iY~~p~C~~c~ka~~~-------L~~~gi~~~~~di~~~~~t~~eL~~~l~~~----g~~~~~~l~n~~~~~~k~l~l 74 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLAL-------LENQGIAPQVIKYLETSPSVEELKRLYQQL----GLNEVRAMMRCKEELYKELNL 74 (119)
T ss_dssp CEEECCTTCHHHHHHHHH-------HHHTTCCCEEECHHHHCCCHHHHHHHHHHH----TCSSGGGGBCTTSHHHHHTTT
T ss_pred EEEEECCCChHHHHHHHH-------HHHcCCceEEEEeccCcCcHHHHHHHHHHc----CCccHHHHhcCCCchhhhcCc
Confidence 345557778888755533 444566555553 2 3477888888876 554 44455667788888775
Q ss_pred C
Q psy2878 121 R 121 (181)
Q Consensus 121 ~ 121 (181)
.
T Consensus 75 ~ 75 (119)
T 3f0i_A 75 G 75 (119)
T ss_dssp T
T ss_pred c
Confidence 4
No 308
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=76.69 E-value=2.4 Score=30.86 Aligned_cols=48 Identities=10% Similarity=-0.015 Sum_probs=30.9
Q ss_pred eecCCCCCCeEEEEEeeCCCCCCChhHHHHHHHHHH-HHHh-cCcEEEEEe
Q psy2878 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVK-DFNE-RNAILLGGS 82 (181)
Q Consensus 34 ~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~-~~~~-~~~~vi~Is 82 (181)
..+..-.++.+|+.|+ -..||.|....+.+.+..+ +|-+ ..+.++...
T Consensus 8 ~~~G~~~a~vtivef~-D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 8 HLLGNPAAKLRLVEFV-SYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp EEESCTTCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred ceecCCCCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 4445555677777776 6679999988877755554 6633 346666444
No 309
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=75.63 E-value=1.6 Score=28.98 Aligned_cols=61 Identities=7% Similarity=-0.092 Sum_probs=35.4
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec--C--CHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhC
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS--D--NEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~--d--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~g 119 (181)
|.+|...+|+.|+....-| +++|+.+-.+.. + +.+.++++.++. ++ .-+....+...+.++
T Consensus 7 i~iY~~~~C~~C~ka~~~L-------~~~gi~y~~~di~~~~~~~~~l~~~~~~~----g~--~~l~n~~~~~~k~l~ 71 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWL-------EDHGIDYTFHDYKKEGLDAETLDRFLKTV----PW--EQLLNRAGTTFRKLP 71 (120)
T ss_dssp EEEEECSSCHHHHHHHHHH-------HHHTCCEEEEEHHHHCCCHHHHHHHHHHS----CG--GGTBCSSSHHHHHSC
T ss_pred EEEEECCCChHHHHHHHHH-------HHcCCcEEEEeeeCCCCCHHHHHHHHHHc----Ch--HhhccCCchhhHhcC
Confidence 3445578899998555443 335666555554 2 246777777765 42 233445566666655
No 310
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=75.37 E-value=5.5 Score=26.53 Aligned_cols=51 Identities=10% Similarity=-0.040 Sum_probs=35.3
Q ss_pred CCCCeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 39 FPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 39 ~~gk~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
|+|.++||.+=.- .. . ..+..+.+.+++.|+.++||....++.+++.+...
T Consensus 45 F~~aPVVlDl~~l--~~--~---~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~ 95 (120)
T 3ghf_A 45 LKHAPVVINVSGL--ES--P---VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRM 95 (120)
T ss_dssp HTTCEEEEEEEEC--CS--S---CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHH
T ss_pred hCCCcEEEEcccc--CC--h---HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHC
Confidence 4788888887322 11 1 24677778888889999999987656566666654
No 311
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=74.45 E-value=2.8 Score=31.01 Aligned_cols=48 Identities=4% Similarity=-0.004 Sum_probs=31.1
Q ss_pred eecCCCCCCeEEEEEeeCCCCCCChhHHHHH-HHHHHHHHh-cCcEEEEEe
Q psy2878 34 ITESSFPGKWKIFYFYPKDFTFVCPTEISEY-NKLVKDFNE-RNAILLGGS 82 (181)
Q Consensus 34 ~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l-~~l~~~~~~-~~~~vi~Is 82 (181)
..+..-.++.+|+.|+ ...||.|....+.+ .++.++|-+ .++.++-..
T Consensus 32 ~~~G~~~A~vtIvef~-Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 32 KLLGDPKAPILMIEYA-SLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp CEESCTTCSEEEEEEE-CTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CccCCCCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 3444445677777776 66799998877764 677777843 245555443
No 312
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=74.30 E-value=3.3 Score=29.96 Aligned_cols=46 Identities=15% Similarity=0.008 Sum_probs=30.0
Q ss_pred cCCCCCCeEEEEEeeCCCCCCChhHHHHH-HHHHHHHHh-cCcEEEEEe
Q psy2878 36 ESSFPGKWKIFYFYPKDFTFVCPTEISEY-NKLVKDFNE-RNAILLGGS 82 (181)
Q Consensus 36 l~~~~gk~~ll~F~~~~~cp~C~~~~~~l-~~l~~~~~~-~~~~vi~Is 82 (181)
+..-.++.+|+.|+ ...||.|....+.+ ..+.++|.+ .++.++-..
T Consensus 24 ~G~~~a~vtvvef~-D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~ 71 (202)
T 3gha_A 24 LGKDDAPVTVVEFG-DYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVN 71 (202)
T ss_dssp ESCTTCSEEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEE
T ss_pred ecCCCCCEEEEEEE-CCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEe
Confidence 44445677777776 66799998877765 455566653 346666554
No 313
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=72.35 E-value=12 Score=23.76 Aligned_cols=57 Identities=16% Similarity=0.028 Sum_probs=38.6
Q ss_pred HHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 64 YNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 64 l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
+++..+.++...+.++.+..|.+.........+....+.++..+.....++.+..|.
T Consensus 20 ~~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk 76 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELGTLLGK 76 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCGGGGTTCS
T ss_pred HHHHHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHHCC
Confidence 345666677777899999988766655555433223477765555668889888885
No 314
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=70.84 E-value=24 Score=27.36 Aligned_cols=98 Identities=9% Similarity=-0.016 Sum_probs=51.7
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHh-cCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCC
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNE-RNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE 123 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~-~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~ 123 (181)
++.|. ..+|+.|......|.++.++++. ..+.++-|..+......++ +.+.||+.
T Consensus 249 ~l~f~-~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~---------------------~~~~~gi~-- 304 (350)
T 1sji_A 249 IVAFA-ERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAY---------------------WEKTFKID-- 304 (350)
T ss_dssp EEEEC-CTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHH---------------------HHHHCCSC--
T ss_pred EEEEE-cCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHH---------------------HHhhcCCC--
Confidence 34444 55676677677777777777763 3355444443321110000 11456653
Q ss_pred CCcceeeEEEEcCCCcEEEEE-eccCCCCCCHHHHHHHHHhhccCC
Q psy2878 124 TGVALRATFIFDPQNIIQHIT-VNNLNVGRNPIETLRILDAIQTGK 168 (181)
Q Consensus 124 ~g~~~p~~~liD~~g~i~~~~-~~~~~~~~~~~~ll~~l~~l~~~~ 168 (181)
. ..|+..+++....-.+.. ..+.......+.|.+.++.+..|+
T Consensus 305 -~-~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gk 348 (350)
T 1sji_A 305 -L-FKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGK 348 (350)
T ss_dssp -T-TSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHTSC
T ss_pred -c-cCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhcCc
Confidence 1 247888888733323332 111122346788888888877654
No 315
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=70.29 E-value=3.4 Score=25.20 Aligned_cols=36 Identities=19% Similarity=0.323 Sum_probs=27.5
Q ss_pred CCCCCeEEEEEeeCCCCCCC------hhHHHHHHHHHHHHHh
Q psy2878 38 SFPGKWKIFYFYPKDFTFVC------PTEISEYNKLVKDFNE 73 (181)
Q Consensus 38 ~~~gk~~ll~F~~~~~cp~C------~~~~~~l~~l~~~~~~ 73 (181)
+++|+.++|-..++.+|+.| ..++..+.++..+|++
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 56888888888888899988 3456667777777765
No 316
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=65.23 E-value=9.4 Score=24.32 Aligned_cols=57 Identities=16% Similarity=-0.003 Sum_probs=38.3
Q ss_pred HHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 64 YNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 64 l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
+++..+.++...+.++.++.|.+.+.......+....+.++..+.....++.+..|.
T Consensus 21 ~~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~~eLG~a~G~ 77 (101)
T 1w41_A 21 ARKSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTSVELGTLLGR 77 (101)
T ss_dssp HHHHHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCHHHHHHHhCC
Confidence 345566677777889999988766665555443223377765554668899999885
No 317
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=65.07 E-value=4.2 Score=29.91 Aligned_cols=14 Identities=14% Similarity=0.010 Sum_probs=8.3
Q ss_pred CCCCCCChhHHHHH
Q psy2878 51 KDFTFVCPTEISEY 64 (181)
Q Consensus 51 ~~~cp~C~~~~~~l 64 (181)
..+||.|......|
T Consensus 177 ~~~Cp~C~~a~~~L 190 (241)
T 1nm3_A 177 KPGCPFCAKAKQLL 190 (241)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHH
Confidence 66777776544333
No 318
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=61.74 E-value=25 Score=22.90 Aligned_cols=57 Identities=14% Similarity=0.072 Sum_probs=37.2
Q ss_pred HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 65 NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 65 ~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
++..+.++...+.++.|+.|-+.....-...+....+.++..+.+...++.+..|..
T Consensus 32 ~~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~Gk~ 88 (112)
T 3iz5_f 32 KTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKY 88 (112)
T ss_dssp HHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHHCTT
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHhCCc
Confidence 445556666668888898886544433333222224788777766789999999863
No 319
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=60.39 E-value=33 Score=22.55 Aligned_cols=51 Identities=2% Similarity=-0.138 Sum_probs=24.0
Q ss_pred CeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCc-EEEEEecCCHHHHHHHHHHc
Q psy2878 42 KWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNA-ILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 42 k~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~-~vi~Is~d~~~~~~~~~~~~ 96 (181)
..+|||.=.+..||.|.... ...++ +.+.++ .+..+..+...+.++.+.++
T Consensus 20 ~~VvvF~Kgt~~~P~C~fc~-~ak~l---L~~~gv~~~~~~~v~~~~~~r~~l~~~ 71 (118)
T 2wul_A 20 DKVVVFLKGTPEQPQCGFSN-AVVQI---LRLHGVRDYAAYNVLDDPELRQGIKDY 71 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHH-HHHHH---HHHTTCCSCEEEETTSCHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCCHHHH-HHHHH---HHHhCCcCeEeecccCCHHHHHHHHHh
Confidence 34666653333355554322 22233 344455 35555655544555555543
No 320
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=59.72 E-value=32 Score=27.47 Aligned_cols=39 Identities=13% Similarity=0.025 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 58 PTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 58 ~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
.+..|.+.++.+.++++|+.++.||....+-++.++++.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~l 258 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDT 258 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 356788899999999999999999999988888888765
No 321
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=59.40 E-value=23 Score=22.49 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=34.8
Q ss_pred HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 65 NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 65 ~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
++..+.++...+.++.+..|-++....-...+....+.++..+ ....++.+..|..
T Consensus 25 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~-~s~~eLG~A~Gk~ 80 (101)
T 3v7q_A 25 DLVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV-ESRAVLGRSIGKE 80 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE-SCHHHHHHHTTSS
T ss_pred hhhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeee-chHHHHHhhhCcc
Confidence 4555666766788999988864333222222212237777666 5578999998864
No 322
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=55.17 E-value=2.2 Score=21.91 Aligned_cols=20 Identities=15% Similarity=0.366 Sum_probs=15.4
Q ss_pred CCCChhHHHHHHHHHHHHHh
Q psy2878 54 TFVCPTEISEYNKLVKDFNE 73 (181)
Q Consensus 54 cp~C~~~~~~l~~l~~~~~~ 73 (181)
||.|...+....+|..=|++
T Consensus 8 CP~C~~~l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYEA 27 (34)
T ss_dssp CTTTCCEESSHHHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHHHh
Confidence 99999888777777666654
No 323
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=54.41 E-value=26 Score=22.16 Aligned_cols=57 Identities=16% Similarity=0.084 Sum_probs=35.4
Q ss_pred HHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 64 YNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 64 l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
+.+..+.++...+.++.+..|-++........+....+.++..+ ....++.+..|..
T Consensus 23 ~~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~-~s~~eLG~a~Gk~ 79 (101)
T 3on1_A 23 EEQVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVV-GNRQMLGRAIGKH 79 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEE-SCHHHHHHHTTSS
T ss_pred HHHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe-CCHHHHHHHhCCc
Confidence 34556666766788888888864444333332222237776654 5578899998863
No 324
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=52.30 E-value=19 Score=23.30 Aligned_cols=56 Identities=13% Similarity=-0.057 Sum_probs=37.2
Q ss_pred HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCC
Q psy2878 65 NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGI 120 (181)
Q Consensus 65 ~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv 120 (181)
++..+.++...+.++.|+.|-+.+.......+....++++..+.....++.+..|.
T Consensus 27 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~G~ 82 (110)
T 3cpq_A 27 KRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVCGK 82 (110)
T ss_dssp HHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHhCC
Confidence 45555666667889999988766555544433223377765554667899999885
No 325
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=50.43 E-value=27 Score=22.06 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=24.0
Q ss_pred eeEEEEcCCCcEEEEEeccC-CCCCCHHHHHHHHHh
Q psy2878 129 RATFIFDPQNIIQHITVNNL-NVGRNPIETLRILDA 163 (181)
Q Consensus 129 p~~~liD~~g~i~~~~~~~~-~~~~~~~~ll~~l~~ 163 (181)
--.|.||++|+|....+... ....--++.+++++.
T Consensus 43 ~v~f~I~~~G~v~~~~v~~ssg~~~ld~aAl~av~~ 78 (106)
T 2k9k_A 43 TLSFTIDTTGKAVDINVVDANPKRMFEREAMQALKK 78 (106)
T ss_dssp EEEEEEETTTEEEEEEEEEESSSSSSHHHHHHHHHH
T ss_pred EEEEEECCCCcEEEEEEEEcCCcHHHHHHHHHHHHh
Confidence 45789999999988776322 223345667788776
No 326
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=50.27 E-value=79 Score=23.81 Aligned_cols=83 Identities=12% Similarity=0.024 Sum_probs=49.4
Q ss_pred ccCCCcEEecccCCCCCCCCCcccceeeeecCCCC-------CCeEEEEEeeCCCCCCChhHHH-HHHHHHH--------
Q psy2878 6 QSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFP-------GKWKIFYFYPKDFTFVCPTEIS-EYNKLVK-------- 69 (181)
Q Consensus 6 ~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~-------gk~~ll~F~~~~~cp~C~~~~~-~l~~l~~-------- 69 (181)
+.+|-|.+. |.+| .++-.+.-. ++.+..+|+ +..... .|.++..
T Consensus 12 ~~VPVF~It---------n~~G----~Pll~~~~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~ 71 (252)
T 4ev1_A 12 DSVPIYLVT---------NEKG----LPLSRPLPNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKM 71 (252)
T ss_dssp TTSEEEEEE---------CTTC----CBCEEECCCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHH
T ss_pred cCCcEEEEE---------CCCC----CeEEEecCCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchh
Confidence 357889999 8888 776655332 345555554 233332 2333433
Q ss_pred -HHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCC
Q psy2878 70 -DFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTN 111 (181)
Q Consensus 70 -~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~ 111 (181)
++. .+++|..|+.+....+..- ...+..++.|.++.|+.
T Consensus 72 ~~~~-~~~kV~~vsL~~vyql~~~--~~~k~~~l~F~fvP~~~ 111 (252)
T 4ev1_A 72 QEIV-KSLQVTAVPLGVIYQQLQQ--TKKDPNRLLFAFKPVDQ 111 (252)
T ss_dssp HHHH-TTCEEEEEEHHHHHHHHHH--TTTCTTCEEEEEECCHH
T ss_pred hhhc-cCceEEEeeHHHHHHHHHh--hccCCcCceEEEcCCHH
Confidence 332 3689999999876554321 22234578899998843
No 327
>2jnb_A NHP2-like protein 1; splicing, KINK-turn RNA-binding protein, NHPX, RNA binding protein; NMR {Homo sapiens} SCOP: d.79.3.1
Probab=50.26 E-value=37 Score=23.26 Aligned_cols=83 Identities=8% Similarity=-0.027 Sum_probs=44.9
Q ss_pred HHHHHhcCcEEEEEecCCHH-HHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEec
Q psy2878 68 VKDFNERNAILLGGSSDNEF-VKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVN 146 (181)
Q Consensus 68 ~~~~~~~~~~vi~Is~d~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~ 146 (181)
.+.++...+.++.|+.|-+. +...+....-...++++.++ +...++.+..|.. ....+.-|+|+++
T Consensus 59 ~KaI~~gkakLVIIA~D~~p~e~~~~l~~lC~~~~VP~~~v-~sk~eLG~a~Gk~----~~vs~vaI~~~~~-------- 125 (144)
T 2jnb_A 59 TKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFV-RSKQALGRACGVS----RPVIACSVTIKEG-------- 125 (144)
T ss_dssp HHHHHHTCEEEEEEETTCSCHHHHTTSCSSCGGGCCCCEEE-SCSHHHHHHHTCS----SCCSEEEEECCTT--------
T ss_pred HHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEE-CCHHHHHHHhCCC----CceEEEEEEeCCc--------
Confidence 33444455788888887544 24444443333347776555 4578899988863 1111345666433
Q ss_pred cCCCCCCHHHHHHHHHhh
Q psy2878 147 NLNVGRNPIETLRILDAI 164 (181)
Q Consensus 147 ~~~~~~~~~~ll~~l~~l 164 (181)
......++++.+.|+.+
T Consensus 126 -s~i~~~~~~~~~~i~~l 142 (144)
T 2jnb_A 126 -SQLKQQIQSIQQSIERL 142 (144)
T ss_dssp -CTTHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 11223355566666554
No 328
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=48.87 E-value=29 Score=22.17 Aligned_cols=58 Identities=17% Similarity=0.180 Sum_probs=35.2
Q ss_pred HHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 64 YNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 64 l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
.++..+.++...+.++.+..|-++....-...+....+.++..+.+...++.+..|..
T Consensus 27 ~~~v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~A~Gk~ 84 (105)
T 3u5e_c 27 YKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKL 84 (105)
T ss_dssp HHHHHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHhCCc
Confidence 3455566666678888888886544333232221112666554456678999999863
No 329
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=48.28 E-value=27 Score=21.25 Aligned_cols=57 Identities=11% Similarity=-0.029 Sum_probs=36.7
Q ss_pred HHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 64 YNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 64 l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
.++..+.++...+.++.|+.|-+.....+...+....+.++..+. ...++.+..|..
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~-sk~eLG~a~Gk~ 72 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE-SMKKLGKACGIE 72 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES-CHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC-CHHHHHHHhCCC
Confidence 345566677667888888888644554444333223377777765 568888888764
No 330
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=48.24 E-value=26 Score=21.48 Aligned_cols=48 Identities=13% Similarity=0.189 Sum_probs=28.2
Q ss_pred hHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccC-CCCCCHHHHHHHHHhh
Q psy2878 113 SLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNL-NVGRNPIETLRILDAI 164 (181)
Q Consensus 113 ~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~-~~~~~~~~ll~~l~~l 164 (181)
..++..|+. |. .--.|.||++|+|....+... +...--++.+++++..
T Consensus 16 ~~a~~~~~~---G~-V~v~~~i~~~G~v~~~~v~~ssg~~~ld~aa~~av~~~ 64 (90)
T 1u07_A 16 ARAQALRIE---GQ-VKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRW 64 (90)
T ss_dssp HHHHHHTCC---EE-EEEEEEECTTSCEEEEEEEEEESSSSSHHHHHHHHTTC
T ss_pred HHHHHCCCc---eE-EEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHhC
Confidence 445555553 32 335789999999988776322 2223345566666644
No 331
>3vi6_A 60S ribosomal protein L30; three-layer alpha/beta/ALPA; 1.59A {Homo sapiens} PDB: 2zkr_6 1ysh_C
Probab=47.44 E-value=44 Score=22.20 Aligned_cols=57 Identities=16% Similarity=0.032 Sum_probs=36.1
Q ss_pred HHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 65 NKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 65 ~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
.+..+.++...+.+|.|..|.++....-+..+....+.+.+++.....++.+..|..
T Consensus 33 ~~v~kaIr~gkakLVIiA~Das~~~~~ki~~~~~~~~~~V~~~~~sk~eLG~A~Gk~ 89 (125)
T 3vi6_A 33 KQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKY 89 (125)
T ss_dssp HHHHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhCCCcEEEcCCHHHHHHHhCCc
Confidence 455566666678899999886554444333221112555665566678999999863
No 332
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=45.71 E-value=16 Score=26.05 Aligned_cols=36 Identities=3% Similarity=-0.062 Sum_probs=22.7
Q ss_pred EEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q psy2878 45 IFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGG 81 (181)
Q Consensus 45 ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~I 81 (181)
.|.+|.-.-||.|-...+.+.++.+ +.+.++++.-.
T Consensus 9 ~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~ 44 (216)
T 2in3_A 9 VLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIM 44 (216)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEE
T ss_pred eEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEe
Confidence 3444547779999866676777666 44435655544
No 333
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=45.33 E-value=51 Score=20.93 Aligned_cols=58 Identities=19% Similarity=0.134 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 64 YNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 64 l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
+++..+.++...+.++.+..|-+.........+....+.++..+.....++.+..|..
T Consensus 27 ~~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~ 84 (104)
T 4a18_G 27 YKSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKY 84 (104)
T ss_dssp HHHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHhCCc
Confidence 3455666666678888888886443333232221112555553346678999999863
No 334
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=44.05 E-value=63 Score=20.91 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=28.4
Q ss_pred EEEEeeCCCCC--CC----hhHHHHHHHHHHHHHhcCcEEEEEec
Q psy2878 45 IFYFYPKDFTF--VC----PTEISEYNKLVKDFNERNAILLGGSS 83 (181)
Q Consensus 45 ll~F~~~~~cp--~C----~~~~~~l~~l~~~~~~~~~~vi~Is~ 83 (181)
+-.|=++.||+ +| -.++-+++...+.++++|+.+-=.+.
T Consensus 7 i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL 51 (106)
T 3ktb_A 7 IEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNL 51 (106)
T ss_dssp EEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEET
T ss_pred EEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 45566788887 34 45788888888899988876655553
No 335
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=42.49 E-value=12 Score=17.31 Aligned_cols=15 Identities=20% Similarity=0.237 Sum_probs=12.7
Q ss_pred eEEEEcCCCcEEEEE
Q psy2878 130 ATFIFDPQNIIQHIT 144 (181)
Q Consensus 130 ~~~liD~~g~i~~~~ 144 (181)
++.|.|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 578999999998765
No 336
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=41.82 E-value=29 Score=27.08 Aligned_cols=38 Identities=13% Similarity=-0.015 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 59 TEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 59 ~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
...+.+.++.+.+++.|++++.||....+-++.|+.+.
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 45678889999999999999999999999999988763
No 337
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=41.60 E-value=31 Score=22.77 Aligned_cols=79 Identities=14% Similarity=0.056 Sum_probs=46.0
Q ss_pred HHHHHHHhcCcEEEEEecCCHH-----HHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcE
Q psy2878 66 KLVKDFNERNAILLGGSSDNEF-----VKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNII 140 (181)
Q Consensus 66 ~l~~~~~~~~~~vi~Is~d~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i 140 (181)
+..+.++...+.++.|+.|-.. ....+++++ +.++..+ ....++.+..|.. ...-+.-|+|+.+
T Consensus 38 ~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~----~VP~~~v-~sk~eLG~a~Gk~----~~vs~vaI~d~~~-- 106 (122)
T 3o85_A 38 EALKQVNRGKAELVIIAADADPIEIVLHLPLACEDK----GVPYVFI-GSKNALGRACNVS----VPTIVASIGKHDA-- 106 (122)
T ss_dssp HHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTT----TCCEEEE-SCHHHHHHHTTCS----SCCSEEEECCCTT--
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHh----CCCEEEE-CCHHHHHHHhCCC----CCEEEEEEEcccc--
Confidence 3444555556788888876522 233444444 7775543 4578999999863 1222466787665
Q ss_pred EEEEeccCCCCCCHHHHHHHHHhh
Q psy2878 141 QHITVNNLNVGRNPIETLRILDAI 164 (181)
Q Consensus 141 ~~~~~~~~~~~~~~~~ll~~l~~l 164 (181)
....++++.+.++++
T Consensus 107 ---------~~~~~~~~~~~i~~~ 121 (122)
T 3o85_A 107 ---------LGNVVAEIVGKVEAL 121 (122)
T ss_dssp ---------THHHHHHHHHHHHTT
T ss_pred ---------hHHHHHHHHHHHHhh
Confidence 113456666666654
No 338
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=41.36 E-value=85 Score=22.46 Aligned_cols=48 Identities=6% Similarity=0.081 Sum_probs=25.9
Q ss_pred CchHHHHhCCCCCCCcceeeEEEEcCC--CcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 111 NGSLIDQLGIRHETGVALRATFIFDPQ--NIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 111 ~~~~~~~~gv~~~~g~~~p~~~liD~~--g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+.++++.|++. .|++.|.-+. +.+.|...+ ....+.++|.+.|+....
T Consensus 63 ~~~v~~~~~v~------~p~i~lfk~~~~~~~~~~~~~--~g~~~~~~l~~fi~~~~~ 112 (227)
T 4f9z_D 63 DSEVLTHYNIT------GNTICLFRLVDNEQLNLEDED--IESIDATKLSRFIEINSL 112 (227)
T ss_dssp CHHHHHHTTCC------SSEEEEEETTTTEEEEECHHH--HHTCCHHHHHHHHHHHCC
T ss_pred CHHHHHHcCCC------CCeEEEEEecCcccccccccc--cCCCCHHHHHHHHHHhCC
Confidence 45677777764 3566666542 223322100 012467888888876553
No 339
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=40.57 E-value=1.2e+02 Score=23.14 Aligned_cols=94 Identities=12% Similarity=0.150 Sum_probs=48.0
Q ss_pred ccCCCcEEecccCCCCCCCCCcccceeeeecCCCCCCeEEEEEeeCCCCCCChhHHHHH-HHHHHH---HHhcCcEEEEE
Q psy2878 6 QSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEY-NKLVKD---FNERNAILLGG 81 (181)
Q Consensus 6 ~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l-~~l~~~---~~~~~~~vi~I 81 (181)
+.+|-|.+. |.+| .++-.+. .++-+.++|+ +......+ +++.+. -...+++|+.|
T Consensus 75 ~~VPVF~It---------n~~G----~Pll~~~-~~~~V~~fF~-------s~~DA~a~L~el~k~~~~~~~~~~kV~pv 133 (279)
T 4e6z_A 75 EVIPVFLIT---------NYNS----SPYIFQE-NEKQVCYMFL-------CPYDAENMLNDMIKYNGMKYNGNIKIHNI 133 (279)
T ss_dssp TTSEEEEEE---------CTTC----CBCCEEE-TTEEEEEEES-------SHHHHHHHHHHHHHHCHHHHTTSCEEEEE
T ss_pred cCCCEEEEE---------cCCC----CEEEecC-CCCeEEEEEC-------CHHHHHHHHHHHHhccCcccccCceEEEe
Confidence 357889999 8888 7765543 3344545443 22333332 333221 11247899999
Q ss_pred ecCCHHHHHH----------HHHHcCCCcccceeEEEcCCchHHHHhCCC
Q psy2878 82 SSDNEFVKLA----------WRRENSNLYKLNHWQFSDTNGSLIDQLGIR 121 (181)
Q Consensus 82 s~d~~~~~~~----------~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~ 121 (181)
+.+....+.. -.....+..++.|.++.|. .++..+..+.
T Consensus 134 sL~kvy~l~~~~~~~~~~~i~~~~~~k~~~l~fr~vP~~-~qV~~A~~ll 182 (279)
T 4e6z_A 134 TMKKAYELMKEFLQLEKMEVNKEDSKKKQNIYWKLISSK-RQLQNALYYL 182 (279)
T ss_dssp EHHHHHHHHHHHHHHHHC----------CCEEEEEECCH-HHHHHHHTTS
T ss_pred cHHHHHHHHhhcccccchhcccccccCCcceeeEecCCH-HHHHHHHHHH
Confidence 9886543311 0111112346678888773 3444444444
No 340
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=35.37 E-value=1e+02 Score=22.03 Aligned_cols=34 Identities=9% Similarity=-0.129 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 63 EYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 63 ~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
...+..++++++|+.++.+|-.+......+.++.
T Consensus 26 ~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l 59 (227)
T 1l6r_A 26 KAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFL 59 (227)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHh
Confidence 4455666777889999999999888888887766
No 341
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=35.19 E-value=93 Score=20.26 Aligned_cols=88 Identities=13% Similarity=0.160 Sum_probs=47.6
Q ss_pred EEEeeCCCCC--CC----hhHHHHHHHHHHHHHhcCcEEEEEecCC-HHHHHHHHHHcCCCcccceeEEEcCCchHHHHh
Q psy2878 46 FYFYPKDFTF--VC----PTEISEYNKLVKDFNERNAILLGGSSDN-EFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118 (181)
Q Consensus 46 l~F~~~~~cp--~C----~~~~~~l~~l~~~~~~~~~~vi~Is~d~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 118 (181)
-.|=++.||+ +| -.++-+++...+.++++|+.+-=.+... +. +|+++. . =.++...+
T Consensus 5 ~ifepamCCstGvCG~~vd~~L~~~~~~~~~lk~~Gi~V~RyNL~~~P~---aF~~N~----~---------V~~~L~~~ 68 (110)
T 3kgk_A 5 MVFDPAMAASTGVCGTDVDQALVDFSTDVQWLKQSGVQIERFNLAQQPM---SFVQNE----K---------VKAFIEAS 68 (110)
T ss_dssp EEEECC-------------CHHHHHHHHHHHHHHHTCCEEEEETTTCTT---HHHHSH----H---------HHHHHHHH
T ss_pred EEecchhccccCCcCCCCCHHHHHHHHHHHHHHHCCCeEEEEccccChH---HHhcCH----H---------HHHHHHHc
Confidence 3455677876 35 3467888888888888887776655432 21 344421 0 03445566
Q ss_pred CCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q psy2878 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILD 162 (181)
Q Consensus 119 gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~ll~~l~ 162 (181)
|+. ..|.+ +| ||+|+....+ ...+++.+.+.
T Consensus 69 G~~-----~LP~~-~V--DGevv~~G~y-----Pt~eEl~~~lg 99 (110)
T 3kgk_A 69 GAE-----GLPLL-LL--DGETVMAGRY-----PKRAELARWFG 99 (110)
T ss_dssp CGG-----GCCEE-EE--TTEEEEESSC-----CCHHHHHHHHT
T ss_pred Ccc-----cCCEE-EE--CCEEEEeccC-----CCHHHHHHHhC
Confidence 764 45544 44 6888876643 34566666554
No 342
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=35.01 E-value=21 Score=22.93 Aligned_cols=15 Identities=7% Similarity=0.076 Sum_probs=13.3
Q ss_pred eEEEEcCCCcEEEEE
Q psy2878 130 ATFIFDPQNIIQHIT 144 (181)
Q Consensus 130 ~~~liD~~g~i~~~~ 144 (181)
.+.|||++|+|++-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 688999999999865
No 343
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=34.82 E-value=31 Score=28.93 Aligned_cols=15 Identities=13% Similarity=0.022 Sum_probs=10.0
Q ss_pred CCCCCCChhHHHHHH
Q psy2878 51 KDFTFVCPTEISEYN 65 (181)
Q Consensus 51 ~~~cp~C~~~~~~l~ 65 (181)
..|||.|......|.
T Consensus 25 ~~~Cp~C~~~k~~L~ 39 (598)
T 2x8g_A 25 KTTCPYCKKVKDVLA 39 (598)
T ss_dssp CTTCHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHH
Confidence 779999975443333
No 344
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=34.65 E-value=68 Score=19.96 Aligned_cols=32 Identities=9% Similarity=-0.006 Sum_probs=21.3
Q ss_pred eeeecCCCCCCeEEEEEeeCCCCCCChhHHHHHH
Q psy2878 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEYN 65 (181)
Q Consensus 32 ~~~~l~~~~gk~~ll~F~~~~~cp~C~~~~~~l~ 65 (181)
..+.|-++.+..+.|-+- +. |..|....-.|+
T Consensus 28 Gdvelv~v~~g~V~V~L~-Ga-C~gCpss~~TLk 59 (88)
T 1xhj_A 28 GDCTLVDVEDGIVKLQLH-GA-CGTCPSSTITLK 59 (88)
T ss_dssp CEEEEEECCSSEEEEEEE-SS-CCSSCHHHHHHH
T ss_pred CeEEEEEEECCEEEEEEe-ec-CCCCcchHHHHH
Confidence 677887777766666664 54 667766655554
No 345
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=33.53 E-value=1.1e+02 Score=20.51 Aligned_cols=57 Identities=9% Similarity=0.078 Sum_probs=31.2
Q ss_pred HHHHhCCCCCCCcceeeEEEEcC--CCcEEEEEeccCCCCCCHHHHHHHHHhhccCC--------ccccCCCCC
Q psy2878 114 LIDQLGIRHETGVALRATFIFDP--QNIIQHITVNNLNVGRNPIETLRILDAIQTGK--------LCACNRTLN 177 (181)
Q Consensus 114 ~~~~~gv~~~~g~~~p~~~liD~--~g~i~~~~~~~~~~~~~~~~ll~~l~~l~~~~--------~~~~~~~~~ 177 (181)
+...||+... ..|+..|++. +++ .|.. . ...-..+.|.+.++....|+ .-|..|..|
T Consensus 80 ~l~~fGl~~~---~~P~v~i~~~~~~~~-Ky~~--~-~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~wn~~ 146 (147)
T 3bj5_A 80 ILEFFGLKKE---ECPAVRLITLEEEMT-KYKP--E-SEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQ 146 (147)
T ss_dssp HHHHTTCCGG---GCSEEEEEECSSSCE-EECC--S-CCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGGGC--
T ss_pred HHHHcCCCcc---cCCEEEEEecccccc-cCCC--C-cccCCHHHHHHHHHHHHcCCccccccCCCCCCCcCCC
Confidence 4455776411 2567778874 332 3333 1 12334677888888777653 466777654
No 346
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=33.29 E-value=1.2e+02 Score=20.89 Aligned_cols=35 Identities=9% Similarity=-0.074 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 62 SEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 62 ~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
+.+.++.+.+++.|+.+..+|...........+..
T Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~ 128 (233)
T 3s6j_A 94 PGAVELLETLDKENLKWCIATSGGIDTATINLKAL 128 (233)
T ss_dssp TTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhc
Confidence 34556667777788999999988877777767654
No 347
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=33.28 E-value=92 Score=19.67 Aligned_cols=58 Identities=14% Similarity=0.010 Sum_probs=30.3
Q ss_pred CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEE
Q psy2878 75 NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHIT 144 (181)
Q Consensus 75 ~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~ 144 (181)
+..-+++.+++.+++.++.++..........+...+... .+| ...++.||+|..+...
T Consensus 72 ~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~---~~g---------~~~~~~DPdGn~iel~ 129 (132)
T 3sk2_A 72 RFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTD---VFG---------RTFLISDPDGHIIRVC 129 (132)
T ss_dssp CCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEE---TTE---------EEEEEECTTCCEEEEE
T ss_pred CcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCccc---Cce---------EEEEEECCCCCEEEEE
Confidence 445578888775555555554311000122233221111 122 3688999999998766
No 348
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=33.01 E-value=26 Score=21.87 Aligned_cols=15 Identities=20% Similarity=0.109 Sum_probs=13.7
Q ss_pred eEEEEcCCCcEEEEE
Q psy2878 130 ATFIFDPQNIIQHIT 144 (181)
Q Consensus 130 ~~~liD~~g~i~~~~ 144 (181)
.++++|++|+|++..
T Consensus 17 gviv~D~~g~I~~~N 31 (121)
T 4hi4_A 17 NVMIADNDLNIIYMN 31 (121)
T ss_dssp EEEEEETTCBEEEEC
T ss_pred cEEEEcCCCeEEEec
Confidence 678999999999987
No 349
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=32.66 E-value=2.4 Score=28.28 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=22.4
Q ss_pred CeEEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q psy2878 42 KWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS 83 (181)
Q Consensus 42 k~~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~ 83 (181)
|.+++.|- ...|+.|......|+++-++ -.++-|+.
T Consensus 2 K~tLILfG-KP~C~vCe~~s~~l~~lede-----Y~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFG-KPYCSICENVSDAVEELKSE-----YDILHVDI 37 (124)
T ss_dssp CEEEEEEE-CTTCHHHHHHHHHHHTTTTT-----EEEEEEEC
T ss_pred CceEEEeC-CCccHHHHHHHHHHHHhhcc-----ccEEEEEe
Confidence 45777776 77799897666555444433 44555553
No 350
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=32.52 E-value=1.1e+02 Score=20.38 Aligned_cols=62 Identities=15% Similarity=0.013 Sum_probs=35.4
Q ss_pred HHHHHhcCcEEEEEecCCHHH-----HHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCC
Q psy2878 68 VKDFNERNAILLGGSSDNEFV-----KLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQN 138 (181)
Q Consensus 68 ~~~~~~~~~~vi~Is~d~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g 138 (181)
.+.++...+.++.+..|-... ...+++++ +.++..+ ....++.+..|.. ...-+.-|+|+++
T Consensus 50 ~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~----~IP~~~v-~sk~eLG~a~G~~----~~v~~vaI~d~~~ 116 (135)
T 2aif_A 50 TKALNRGIAEIVLLAADAEPLEILLHLPLVCEDK----NTPYVFV-RSKVALGRACGVS----RPVIAAAITSKDG 116 (135)
T ss_dssp HHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHT----TCCEEEE-SCHHHHHHHTTCS----SCCSEEEEECCTT
T ss_pred HHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhc----CCcEEEE-CCHHHHHHHhCCC----CcEEEEEEEcCCc
Confidence 333444457888888774332 23344444 7777654 5578999998863 1112355676443
No 351
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=31.62 E-value=30 Score=19.29 Aligned_cols=16 Identities=13% Similarity=0.094 Sum_probs=13.4
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
..+++|++|+|++...
T Consensus 4 ~i~~~d~~g~i~~~N~ 19 (96)
T 3a0s_A 4 AIITLSKDGRITEWNK 19 (96)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEEcCCCCEeehhH
Confidence 4689999999998763
No 352
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=31.59 E-value=1.2e+02 Score=21.11 Aligned_cols=36 Identities=14% Similarity=0.080 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 61 ISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 61 ~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
.+...++.+.++++|+.+..+|.......+.+++..
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~ 129 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAF 129 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 455666666677777777777777766666666654
No 353
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=30.54 E-value=15 Score=30.92 Aligned_cols=34 Identities=3% Similarity=0.021 Sum_probs=24.1
Q ss_pred CccCccCCCcEEecccCCCCCCCCCcccceeeeecCCC--CCCeEEEEE
Q psy2878 2 KTIGQSLSSYRVIGVKPGFNLPEENNVSAFKVITESSF--PGKWKIFYF 48 (181)
Q Consensus 2 l~~G~~~P~f~l~~~~~~~~~~d~~G~~~~~~~~l~~~--~gk~~ll~F 48 (181)
+.+|..+||+.+. ..+| .+..|.++ .|+++||.|
T Consensus 445 ~~~G~r~pd~~l~---------~~~g----~~~~l~~~l~~~~~~ll~~ 480 (570)
T 3fmw_A 445 PWPGRFAGGLVLS---------RPSG----EPVPVAELLRSARPLLLDL 480 (570)
T ss_dssp SSTTCBCTTCEEC---------CSTT----CCEEHHHHSTTCCCEEECS
T ss_pred ccccCcCCCceee---------cCCC----cceeHHHHhcCCeEEEEEe
Confidence 3578999999887 4566 55666554 357888886
No 354
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=29.71 E-value=37 Score=20.47 Aligned_cols=16 Identities=31% Similarity=0.279 Sum_probs=13.8
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
..+++|.+|+|++...
T Consensus 19 ~i~~~D~~g~I~~~N~ 34 (115)
T 3b33_A 19 ATLILDDGLAIRYANP 34 (115)
T ss_dssp EEEEECTTCBEEEECH
T ss_pred eEEEECCCCcEEEECH
Confidence 5789999999998873
No 355
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=29.64 E-value=2e+02 Score=23.84 Aligned_cols=55 Identities=9% Similarity=-0.111 Sum_probs=38.8
Q ss_pred CCeEEEEEeeCCC--CCC-Ch----hHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 41 GKWKIFYFYPKDF--TFV-CP----TEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 41 gk~~ll~F~~~~~--cp~-C~----~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
|.+++.+|..... -+. .. -.+..|.++.+++++.|..++.+.-++.+. .++++++
T Consensus 67 ~~pVl~vfildp~~~~~~~~~~r~~FL~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~ 128 (506)
T 3umv_A 67 ASPLAVAFALFPRPFLLSARRRQLGFLLRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRL 128 (506)
T ss_dssp TCCEEEEEECCCTTCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHT
T ss_pred CCCEEEEEeccchhhccCCCHHHHHHHHHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhc
Confidence 5567777763322 111 11 235678899999999999999988888877 8888876
No 356
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=29.58 E-value=1.1e+02 Score=19.30 Aligned_cols=17 Identities=24% Similarity=0.485 Sum_probs=14.1
Q ss_pred eeEEEEcCCCcEEEEEe
Q psy2878 129 RATFIFDPQNIIQHITV 145 (181)
Q Consensus 129 p~~~liD~~g~i~~~~~ 145 (181)
...|+.||+|..+....
T Consensus 111 ~~~~~~DPdGn~iel~~ 127 (135)
T 3rri_A 111 ETFFLIDPSNNLLEFKY 127 (135)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEE
Confidence 46899999999987764
No 357
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=28.50 E-value=4.2 Score=19.25 Aligned_cols=11 Identities=18% Similarity=0.265 Sum_probs=8.2
Q ss_pred CCCCChhHHHH
Q psy2878 53 FTFVCPTEISE 63 (181)
Q Consensus 53 ~cp~C~~~~~~ 63 (181)
-||+|...||.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 49999877654
No 358
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=28.08 E-value=1.7e+02 Score=21.18 Aligned_cols=82 Identities=7% Similarity=0.042 Sum_probs=44.8
Q ss_pred HHh-cCcEEEEEecCC-HHHHHHHHH---HcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcC--------C
Q psy2878 71 FNE-RNAILLGGSSDN-EFVKLAWRR---ENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDP--------Q 137 (181)
Q Consensus 71 ~~~-~~~~vi~Is~d~-~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~--------~ 137 (181)
..+ ..+.+||.-.+. ......|.+ .+ +..+.|-.. .+.++++.|++. .|++.|.-+ +
T Consensus 21 ~~~~~~v~vVgff~~~~~~~~~~F~~~A~~l--r~~~~F~~t--~~~~v~~~~~v~------~p~ivlfk~~~~~~kfde 90 (250)
T 3ec3_A 21 LKDGDDVVILGVFQGVGDPGYLQYQDAANTL--REDYKFHHT--FSTEIAKFLKVS------LGKLVLMQPEKFQSKYEP 90 (250)
T ss_dssp HHHCSSCEEEEECSCTTCHHHHHHHHHHHHH--TTTCCEEEE--CCHHHHHHHTCC------SSEEEEECCGGGCCTTSC
T ss_pred HhcCCCeEEEEEEcCCCchHHHHHHHHHHhh--hcCcEEEEE--CcHHHHHHcCCC------CCeEEEEecchhhccccc
Confidence 344 567777765432 222333332 22 124444443 356788888874 367777754 4
Q ss_pred CcEEEEEeccCCCCCCHHHHHHHHHhhcc
Q psy2878 138 NIIQHITVNNLNVGRNPIETLRILDAIQT 166 (181)
Q Consensus 138 g~i~~~~~~~~~~~~~~~~ll~~l~~l~~ 166 (181)
+++.|.. . ...+.++|.+.|+....
T Consensus 91 ~~~~y~g--~--~~~~~~~l~~fi~~~~~ 115 (250)
T 3ec3_A 91 RMHVMDV--Q--GSTEASAIKDYVVKHAL 115 (250)
T ss_dssp SCEEEEC--C--TTSCHHHHHHHHHHHSS
T ss_pred cceeccC--C--CCCCHHHHHHHHHHcCC
Confidence 5665521 0 12467889998877653
No 359
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=28.05 E-value=75 Score=21.49 Aligned_cols=43 Identities=14% Similarity=0.096 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhcCcEEEEEecCC---HHHHHHHHHHcCCCcccceeEEEc
Q psy2878 63 EYNKLVKDFNERNAILLGGSSDN---EFVKLAWRRENSNLYKLNHWQFSD 109 (181)
Q Consensus 63 ~l~~l~~~~~~~~~~vi~Is~d~---~~~~~~~~~~~~~~~~~~~~~~~D 109 (181)
...+..+++++.|..++.+|.-+ ......|.+++ ++++..+..
T Consensus 28 ~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~----gi~~~~I~~ 73 (142)
T 2obb_A 28 FAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRAR----GLEFYAANK 73 (142)
T ss_dssp THHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT----TCCCSEESS
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHc----CCCeEEEEc
Confidence 44566677788899999888765 45667777776 788777765
No 360
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=27.63 E-value=72 Score=20.02 Aligned_cols=38 Identities=16% Similarity=0.018 Sum_probs=28.0
Q ss_pred hhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHH
Q psy2878 58 PTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRE 95 (181)
Q Consensus 58 ~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~ 95 (181)
....+...++.++++++|+.+..+|..+........+.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~ 54 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRE 54 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 34567888888999999999999998765544444444
No 361
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=27.46 E-value=1.8e+02 Score=21.09 Aligned_cols=50 Identities=12% Similarity=0.119 Sum_probs=26.0
Q ss_pred HHHHhCCCCCCCcceeeEEEEcCCCcEEEEEeccCCCCCCHHH--HHHHHHhhccCCc
Q psy2878 114 LIDQLGIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIE--TLRILDAIQTGKL 169 (181)
Q Consensus 114 ~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~~~~~~~~~~~~--ll~~l~~l~~~~~ 169 (181)
+...||+... +...|+..|+|.+++ .|.. .. .-..+. |.+.++.+..|+.
T Consensus 182 ~~~~fgl~~~-~~~~P~v~i~~~~~~-ky~~--~~--~~t~~~~~i~~F~~~~~~Gkl 233 (252)
T 2h8l_A 182 ELSDFGLEST-AGEIPVVAIRTAKGE-KFVM--QE--EFSRDGKALERFLQDYFDGNL 233 (252)
T ss_dssp HHGGGTCCCC-SCSSCEEEEECTTSC-EEEC--CS--CCCTTSHHHHHHHHHHHHTCS
T ss_pred HHHHcCCCCc-cCCCCEEEEEeCcCc-EecC--Cc--ccCcchHHHHHHHHHHHCCCc
Confidence 3445776200 113578888887665 4443 21 222334 6666666665543
No 362
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=27.18 E-value=64 Score=19.38 Aligned_cols=16 Identities=25% Similarity=0.206 Sum_probs=13.7
Q ss_pred eEEEEcCC-CcEEEEEe
Q psy2878 130 ATFIFDPQ-NIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~-g~i~~~~~ 145 (181)
.++++|++ |+|++...
T Consensus 10 ~i~~~d~~~g~I~~~N~ 26 (114)
T 1ll8_A 10 AIFTVDAKTTEILVAND 26 (114)
T ss_dssp EEEEEETTTCBEEEECT
T ss_pred eEEEEECCCCeEEEehH
Confidence 67899999 99998863
No 363
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=26.59 E-value=1.3e+02 Score=19.11 Aligned_cols=57 Identities=9% Similarity=-0.015 Sum_probs=32.5
Q ss_pred CcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEe
Q psy2878 75 NAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITV 145 (181)
Q Consensus 75 ~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~ 145 (181)
+..-+++.+++.+++.++.++... .+.. +...+... .+| ....++.||+|.++....
T Consensus 71 ~~~~l~f~v~~~~dv~~~~~~l~~-~G~~--~~~~~~~~---~~g--------~~~~~~~DPdG~~iel~~ 127 (138)
T 2a4x_A 71 HRFAIAFEFPDTASVDKKYAELVD-AGYE--GHLKPWNA---VWG--------QRYAIVKDPDGNVVDLFA 127 (138)
T ss_dssp CSEEEEEECSSHHHHHHHHHHHHH-TTCC--EEEEEEEE---TTT--------EEEEEEECTTCCEEEEEE
T ss_pred CeEEEEEEeCCHHHHHHHHHHHHH-CCCc--eeeCCccc---CCC--------cEEEEEECCCCCEEEEEe
Confidence 567788889865555554444311 1333 22221110 122 347889999999988774
No 364
>2gx5_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, GAF domain; HET: PG4 P6G PCG PGE; 1.74A {Bacillus subtilis} PDB: 2b18_A 2hgv_A*
Probab=26.38 E-value=93 Score=21.90 Aligned_cols=16 Identities=6% Similarity=0.260 Sum_probs=14.2
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
.+||++++|+|.....
T Consensus 48 NvyIvs~~GkiLG~~~ 63 (170)
T 2gx5_A 48 NIFVVSRRGKLLGYSI 63 (170)
T ss_dssp EEEEEETTSBEEEEEC
T ss_pred CEEEEcCCCCEEEEec
Confidence 6899999999988874
No 365
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=25.94 E-value=46 Score=20.48 Aligned_cols=16 Identities=13% Similarity=0.071 Sum_probs=13.8
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
..+++|++|+|++...
T Consensus 24 ~i~~~D~~g~i~~~N~ 39 (118)
T 3fg8_A 24 GFMALDEDLRIIYVNS 39 (118)
T ss_dssp EEEEECTTCBEEEECH
T ss_pred eEEEECCCCeEEEECH
Confidence 5789999999998874
No 366
>3t12_B Gliding protein MGLB; G-domain containing protein, bacterial polarity, motility, homodimeric GAP protein, POLE localisation; HET: GDP; 2.20A {Thermus thermophilus} PDB: 3t1q_B*
Probab=25.89 E-value=1.4e+02 Score=20.09 Aligned_cols=16 Identities=6% Similarity=0.160 Sum_probs=13.5
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
..+|+|++|.++....
T Consensus 28 ~~~lvd~dG~vIa~~~ 43 (136)
T 3t12_B 28 YALLIDRKGFVLAHKE 43 (136)
T ss_dssp EEEEEETTC-CCEEEE
T ss_pred EEEEEcCCCCEEEEec
Confidence 8999999999998883
No 367
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=25.87 E-value=80 Score=21.98 Aligned_cols=59 Identities=19% Similarity=0.158 Sum_probs=43.3
Q ss_pred EEEEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHcCCCcccceeEEEc
Q psy2878 44 KIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSD 109 (181)
Q Consensus 44 ~ll~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D 109 (181)
+||.+- +---|.+....-..+++.+++.+.+-.+|||+..+-...+.|.+. ++|.++.|
T Consensus 87 ~vVllG-GLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms~F~kagW~~~------IdFD~iID 145 (157)
T 2r47_A 87 VLVLLG-GLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMDMFARAGWYEL------LDFDCVIN 145 (157)
T ss_dssp EEEEEG-GGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETTHHHHTTHHHH------SCCSEEEE
T ss_pred EEEEec-cccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHHHHHHcCCCcc------CCccEEEE
Confidence 444443 444677766777788888888555678999999999999999985 46666665
No 368
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=25.82 E-value=45 Score=23.56 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=25.7
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGS 82 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~~~~~~vi~Is 82 (181)
|.||+-.-||.|-.-.+.|.++.+++.. ++.|.-..
T Consensus 5 I~~~~D~~CP~cy~~~~~l~~l~~~~~~-~v~v~~~p 40 (208)
T 3kzq_A 5 LYYVHDPMCSWCWGYKPTIEKLKQQLPG-VIQFEYVV 40 (208)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHSCT-TSEEEEEE
T ss_pred EEEEECCCCchhhhhhHHHHHHHHhCCC-CceEEEEe
Confidence 4455577799999888999999888853 45554433
No 369
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=25.81 E-value=1e+02 Score=20.93 Aligned_cols=25 Identities=4% Similarity=-0.162 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHhcCcEEEEEecC
Q psy2878 60 EISEYNKLVKDFNERNAILLGGSSD 84 (181)
Q Consensus 60 ~~~~l~~l~~~~~~~~~~vi~Is~d 84 (181)
..|...++.+++++.|+.+..+|..
T Consensus 43 ~~pg~~e~L~~L~~~G~~l~i~Tn~ 67 (176)
T 2fpr_A 43 FEPGVIPQLLKLQKAGYKLVMITNQ 67 (176)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred CCccHHHHHHHHHHCCCEEEEEECC
Confidence 3466777788888889999999886
No 370
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=25.50 E-value=63 Score=22.17 Aligned_cols=19 Identities=16% Similarity=0.139 Sum_probs=15.3
Q ss_pred eeEEEEcCCCcEEEEEecc
Q psy2878 129 RATFIFDPQNIIQHITVNN 147 (181)
Q Consensus 129 p~~~liD~~g~i~~~~~~~ 147 (181)
.+.||+|++|+++....+.
T Consensus 3 ~~i~Il~~~Gk~~lsk~y~ 21 (158)
T 1w63_Q 3 RFMLLFSRQGKLRLQKWYL 21 (158)
T ss_dssp EEEEEECSSSCEEEEEESS
T ss_pred EEEEEECCCCCEEEEEeCC
Confidence 3789999999988777554
No 371
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=25.39 E-value=1.6e+02 Score=19.74 Aligned_cols=35 Identities=14% Similarity=0.030 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 62 SEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 62 ~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
+...++.+.+++.|+.+..+|..+........++.
T Consensus 92 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~ 126 (214)
T 3e58_A 92 PDVLKVLNEVKSQGLEIGLASSSVKADIFRALEEN 126 (214)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT
T ss_pred chHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHc
Confidence 44556677777788888888888777777766665
No 372
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=25.08 E-value=1.7e+02 Score=20.01 Aligned_cols=35 Identities=11% Similarity=-0.010 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 62 SEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 62 ~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
|.+.++.+.+++.|+.+..+|..+........+..
T Consensus 87 pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~ 121 (216)
T 3kbb_A 87 PGVREALEFVKSKRIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhc
Confidence 34556677777889999888888877776666655
No 373
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=24.99 E-value=43 Score=21.72 Aligned_cols=16 Identities=13% Similarity=0.283 Sum_probs=14.0
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
.++++|.+|+|++...
T Consensus 19 ~i~~~D~~g~I~~~N~ 34 (129)
T 3mfx_A 19 AMILVNANGFIRSCNQ 34 (129)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEECCCCEEEeEhH
Confidence 6789999999998874
No 374
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=24.80 E-value=44 Score=20.38 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=13.5
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
.++++|++|+|++...
T Consensus 5 ~i~~~d~~g~i~~~N~ 20 (119)
T 2vv6_A 5 AMIVIDGHGIIQLFST 20 (119)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEECCCCeEEEEhH
Confidence 5789999999998774
No 375
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=24.58 E-value=1.5e+02 Score=19.37 Aligned_cols=33 Identities=12% Similarity=-0.088 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 64 YNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 64 l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
..+..+++++.|+.++.+|..+......+.++.
T Consensus 41 ~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~ 73 (162)
T 2p9j_A 41 DGIGIKLLQKMGITLAVISGRDSAPLITRLKEL 73 (162)
T ss_dssp HHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc
Confidence 346677778889999999988877777777765
No 376
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=24.52 E-value=1.3e+02 Score=21.59 Aligned_cols=67 Identities=15% Similarity=0.050 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhcCcEEEEEecC------CHHHHHHHHHHcCCCcccceeEEEcCC-chHHHHhCCCCCCCcceeeEEEEc
Q psy2878 63 EYNKLVKDFNERNAILLGGSSD------NEFVKLAWRRENSNLYKLNHWQFSDTN-GSLIDQLGIRHETGVALRATFIFD 135 (181)
Q Consensus 63 ~l~~l~~~~~~~~~~vi~Is~d------~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~gv~~~~g~~~p~~~liD 135 (181)
.|.++.+.+++.+ ..+.|..| ..+..-.|+.+. .++.+-+-.-.. -..++..|+. ..++.||||
T Consensus 42 ~l~~~v~~lk~~~-K~v~Vh~Dli~Gls~d~~ai~fL~~~---~~pdGIIsTk~~~i~~Ak~~gL~-----tIqR~FliD 112 (192)
T 3kts_A 42 QLKALVKYAQAGG-KKVLLHADLVNGLKNDDYAIDFLCTE---ICPDGIISTRGNAIMKAKQHKML-----AIQRLFMID 112 (192)
T ss_dssp THHHHHHHHHHTT-CEEEEEGGGEETCCCSHHHHHHHHHT---TCCSEEEESCHHHHHHHHHTTCE-----EEEEEECCS
T ss_pred HHHHHHHHHHHcC-CeEEEecCchhccCCcHHHHHHHHhC---CCCCEEEeCcHHHHHHHHHCCCe-----EEEEEEEEE
Confidence 4556666677765 34455554 345666788763 355544433222 4667888876 667899999
Q ss_pred CCC
Q psy2878 136 PQN 138 (181)
Q Consensus 136 ~~g 138 (181)
...
T Consensus 113 S~a 115 (192)
T 3kts_A 113 SSA 115 (192)
T ss_dssp HHH
T ss_pred cch
Confidence 543
No 377
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=24.20 E-value=62 Score=24.02 Aligned_cols=36 Identities=8% Similarity=0.146 Sum_probs=23.0
Q ss_pred eeEEEEcCCCcEEEEEeccCC-CCCCHHHHHHHHHhh
Q psy2878 129 RATFIFDPQNIIQHITVNNLN-VGRNPIETLRILDAI 164 (181)
Q Consensus 129 p~~~liD~~g~i~~~~~~~~~-~~~~~~~ll~~l~~l 164 (181)
--.|.||++|+|....+...+ ....-++.+++++..
T Consensus 167 ~V~f~Id~dG~V~~v~V~~SSG~~~LD~aAl~AVr~~ 203 (229)
T 2grx_C 167 KVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRW 203 (229)
T ss_dssp CEEEECCTTSCCEEEEECCCSSSTTSHHHHHHHTTSC
T ss_pred EEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHh
Confidence 357899999999887763222 222345566666644
No 378
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=24.10 E-value=53 Score=20.08 Aligned_cols=16 Identities=25% Similarity=-0.008 Sum_probs=13.7
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
.++++|.+|+|++...
T Consensus 17 ~i~~~d~~g~i~~~N~ 32 (120)
T 2gj3_A 17 AISITDLKANILYANR 32 (120)
T ss_dssp EEEEECTTCBEEEECH
T ss_pred eEEEECCCCCEEeehH
Confidence 5789999999998863
No 379
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=24.06 E-value=52 Score=19.49 Aligned_cols=15 Identities=13% Similarity=0.162 Sum_probs=13.1
Q ss_pred eEEEEcCCCcEEEEE
Q psy2878 130 ATFIFDPQNIIQHIT 144 (181)
Q Consensus 130 ~~~liD~~g~i~~~~ 144 (181)
..+++|++|+|++..
T Consensus 25 ~i~~~d~~g~i~~~N 39 (118)
T 3olo_A 25 ASFCLGDNWQFLYVN 39 (118)
T ss_dssp EEEEECTTSBEEEEC
T ss_pred eEEEECCCCcEEEEH
Confidence 578999999999876
No 380
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=23.46 E-value=49 Score=21.96 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=14.3
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
..+++|++|+|++...
T Consensus 29 Gii~lD~~g~I~~~N~ 44 (125)
T 1nwz_A 29 GAIQLDGDGNILQYNA 44 (125)
T ss_dssp EEEEEETTCBEEEECH
T ss_pred eEEEECCCCEEEEEHH
Confidence 6889999999999884
No 381
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=23.46 E-value=46 Score=22.51 Aligned_cols=16 Identities=19% Similarity=0.223 Sum_probs=14.2
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
.++++|++|+|++...
T Consensus 34 gi~v~D~~g~I~~~N~ 49 (152)
T 3mxq_A 34 ALCIVRNDYVIVKVNE 49 (152)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred CEEEEcCCCEEEEECH
Confidence 6789999999999875
No 382
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=23.27 E-value=74 Score=21.27 Aligned_cols=19 Identities=11% Similarity=-0.055 Sum_probs=15.2
Q ss_pred eeEEEEcCCCcEEEEEecc
Q psy2878 129 RATFIFDPQNIIQHITVNN 147 (181)
Q Consensus 129 p~~~liD~~g~i~~~~~~~ 147 (181)
.+.+|+|++|+++....+.
T Consensus 3 ~~i~i~~~~Gk~~l~k~y~ 21 (142)
T 2vgl_S 3 RFILIQNRAGKTRLAKWYM 21 (142)
T ss_dssp EEEEEEETTSCEEEEEECS
T ss_pred EEEEEEcCCCCEEEEEeCC
Confidence 3789999999988777654
No 383
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=23.19 E-value=55 Score=20.07 Aligned_cols=16 Identities=19% Similarity=0.362 Sum_probs=13.4
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
.++++|++|++++...
T Consensus 23 ~i~~~d~~g~i~~vN~ 38 (117)
T 2r78_A 23 GIFIMDAEGHYLDVNP 38 (117)
T ss_dssp EEEEECTTSBEEEECH
T ss_pred eEEEECCCCCEEEecH
Confidence 5789999999998763
No 384
>2hh8_A Hypothetical protein YDFO; structure, autostructure, NESG, PSI-2, northeast structural genomics consortium, protein structure initiative; NMR {Escherichia coli} SCOP: d.358.1.1
Probab=23.18 E-value=97 Score=21.35 Aligned_cols=38 Identities=3% Similarity=-0.027 Sum_probs=23.7
Q ss_pred EEEEcCCCcEEEEEec----cCCCCCCHHHHHHHHHhhccCC
Q psy2878 131 TFIFDPQNIIQHITVN----NLNVGRNPIETLRILDAIQTGK 168 (181)
Q Consensus 131 ~~liD~~g~i~~~~~~----~~~~~~~~~~ll~~l~~l~~~~ 168 (181)
+..++.+|..+..... +.....+.+.+..+++..|+|+
T Consensus 49 ~~y~~~~d~~i~~~~~~~~~~Va~~~n~~~ik~~lk~hQaG~ 90 (149)
T 2hh8_A 49 VHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSRE 90 (149)
T ss_dssp EEEECSSSCEEEEECSTTCCCCCSCCCHHHHHHHHHHHHHTC
T ss_pred EEEEccCCCEEEeecCcceeeecCcCCHHHHHHHHHHHhcCC
Confidence 3345566654444432 1233567889999999999874
No 385
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=23.03 E-value=48 Score=22.32 Aligned_cols=17 Identities=12% Similarity=0.126 Sum_probs=14.7
Q ss_pred eEEEEcCCCcEEEEEec
Q psy2878 130 ATFIFDPQNIIQHITVN 146 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~~ 146 (181)
.++++|++|+|+|....
T Consensus 31 gI~~vD~~g~I~~~N~a 47 (151)
T 2qkp_A 31 EITFVNKDDIFQYYNDS 47 (151)
T ss_dssp EEEEEETTSBEEEECCC
T ss_pred ceEEEcCCCeEEEEeCC
Confidence 57899999999998853
No 386
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=22.80 E-value=51 Score=19.87 Aligned_cols=16 Identities=6% Similarity=0.094 Sum_probs=13.6
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
.++++|++|+|++...
T Consensus 31 ~i~~~d~~g~i~~~N~ 46 (125)
T 3fc7_A 31 GIVHLTTNGTILSVNP 46 (125)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEEcCCCeEEEECH
Confidence 5789999999998763
No 387
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=22.68 E-value=1.5e+02 Score=18.75 Aligned_cols=54 Identities=11% Similarity=-0.019 Sum_probs=29.8
Q ss_pred EEEEecCCHHHHHHHHHHcCCCcccceeEEEcCCchHHHHhCCCCCCCcceeeEEEEcCCCcEEEEEe
Q psy2878 78 LLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITV 145 (181)
Q Consensus 78 vi~Is~d~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~gv~~~~g~~~p~~~liD~~g~i~~~~~ 145 (181)
-+++.+++.+++.++.++... .+. .++..+... .+| ....++.||+|..+....
T Consensus 78 ~~~f~v~~~~dv~~~~~~l~~-~G~--~~~~~~~~~---~~g--------~~~~~~~DPdG~~iel~~ 131 (141)
T 2rbb_A 78 LLNFDVDTKEAVDKLVPVAIA-AGA--TLIKAPYET---YYH--------WYQAVLLDPERNVFRINN 131 (141)
T ss_dssp EEEEECSCHHHHHHHHHHHHH-TTC--EEEEEEEEC---TTS--------EEEEEEECTTSCEEEEEE
T ss_pred EEEEEcCCHHHHHHHHHHHHH-cCC--eEecCcccc---CCc--------cEEEEEECCCCCEEEEEE
Confidence 678888875555554444311 133 233221110 122 347889999999987764
No 388
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=22.45 E-value=53 Score=21.99 Aligned_cols=16 Identities=13% Similarity=0.225 Sum_probs=14.2
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
..+++|++|+|++...
T Consensus 34 GiivlD~dg~I~~~N~ 49 (129)
T 1mzu_A 34 GAIQVDGSGVIHRYNR 49 (129)
T ss_dssp EEEEEETTCBEEEECH
T ss_pred eEEEECCCCeEEEEHH
Confidence 6889999999999884
No 389
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=22.28 E-value=1.8e+02 Score=20.77 Aligned_cols=63 Identities=13% Similarity=0.071 Sum_probs=39.1
Q ss_pred HHHHHHHHHhcCcEEEEEecC------CHHHHHHHHHHcCCCcccceeEEEcCC-chHHHHhCCCCCCCcceeeEEEEcC
Q psy2878 64 YNKLVKDFNERNAILLGGSSD------NEFVKLAWRRENSNLYKLNHWQFSDTN-GSLIDQLGIRHETGVALRATFIFDP 136 (181)
Q Consensus 64 l~~l~~~~~~~~~~vi~Is~d------~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~gv~~~~g~~~p~~~liD~ 136 (181)
|.++.+.+++.|. .+.|..| ..+..-.|++.. ++.+.+-+-.. -..++.+|+. ..++.||+|.
T Consensus 45 L~~iv~~ik~~gK-~vivh~DlI~GLs~d~~ai~fL~~~----~pdGIIsTk~~~i~~Akk~GL~-----tIqR~FliDs 114 (188)
T 1vkf_A 45 LKFHLKILKDRGK-TVFVDMDFVNGLGEGEEAILFVKKA----GADGIITIKPKNYVVAKKNGIP-----AVLRFFALDS 114 (188)
T ss_dssp HHHHHHHHHHTTC-EEEEEGGGEETCCSSHHHHHHHHHH----TCSEEEESCHHHHHHHHHTTCC-----EEEEEECCSH
T ss_pred HHHHHHHHHHCCC-eEEEecCcccccCCCHHHHHHHHhc----CCCEEEcCcHHHHHHHHHcCCE-----EeeEEEEEEe
Confidence 6666667777653 3344433 345666788443 55554443322 4667888987 7789999995
No 390
>1lr0_A TOLA protein; domain-swapping, TONB, protein transport; 1.91A {Pseudomonas aeruginosa} SCOP: d.212.1.1
Probab=22.21 E-value=1.7e+02 Score=19.20 Aligned_cols=37 Identities=8% Similarity=0.076 Sum_probs=23.5
Q ss_pred eeEEEEcCCCcEEEEEeccCCCCCCHH-HHHHHHHhhc
Q psy2878 129 RATFIFDPQNIIQHITVNNLNVGRNPI-ETLRILDAIQ 165 (181)
Q Consensus 129 p~~~liD~~g~i~~~~~~~~~~~~~~~-~ll~~l~~l~ 165 (181)
.-.|.|+++|+|....+...+-...++ ..+++|+...
T Consensus 55 ~V~v~l~~dG~v~~v~v~~SSG~~~lD~AAl~AV~ra~ 92 (129)
T 1lr0_A 55 EVLIEMLPDGTITNASVSRSSGDKPFDSSAVAAVRNVG 92 (129)
T ss_dssp EEEEEECTTSBEEEEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred EEEEEECCCCCEEEEEEeeCCCCHHHHHHHHHHHHHhC
Confidence 356889999999988763222222333 5677776554
No 391
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=22.00 E-value=1.7e+02 Score=23.38 Aligned_cols=27 Identities=11% Similarity=0.007 Sum_probs=21.2
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHH
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFN 72 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~ 72 (181)
|-|..+..||+|..-...+.+..+--.
T Consensus 58 ieli~GPGCPVCVtp~~~ID~ai~LA~ 84 (372)
T 2z1d_A 58 VKVVSGPGCPVCITPVEDIVAMQLIMR 84 (372)
T ss_dssp EEEEECCCCTTTTSCHHHHHHHHHHHH
T ss_pred cEEecCCCCccEECcHHHHHHHHHHHh
Confidence 456669999999988888887776555
No 392
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=21.90 E-value=1e+02 Score=19.27 Aligned_cols=16 Identities=13% Similarity=0.127 Sum_probs=13.5
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
..+++|.+|+++|...
T Consensus 11 ~i~v~d~~G~i~yvn~ 26 (111)
T 2vlg_A 11 IHAVLASNGRIIYISA 26 (111)
T ss_dssp EEEEECTTSBEEEECT
T ss_pred EEEEEcCCCeEEEECh
Confidence 5789999999998873
No 393
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=21.65 E-value=1.7e+02 Score=19.58 Aligned_cols=34 Identities=12% Similarity=-0.014 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 63 EYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 63 ~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
.+.++.+.+++.|+.+..+|..+........++.
T Consensus 88 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~ 121 (216)
T 2pib_A 88 GVREALEFVKSKRIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhc
Confidence 3445666677788898888888877777767665
No 394
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=21.65 E-value=2.2e+02 Score=23.77 Aligned_cols=37 Identities=11% Similarity=-0.085 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 60 EISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 60 ~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
.+..|..+.+++++.|..++.+.-++.+.+.++++++
T Consensus 87 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~ 123 (543)
T 2wq7_A 87 LQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSW 123 (543)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHc
Confidence 3577888999999999999888888888888888876
No 395
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=21.57 E-value=31 Score=25.53 Aligned_cols=15 Identities=7% Similarity=-0.046 Sum_probs=12.2
Q ss_pred cCCccccCCCCCCCC
Q psy2878 166 TGKLCACNRTLNGKT 180 (181)
Q Consensus 166 ~~~~~~~~~~~~~~~ 180 (181)
...+|+++|++|.++
T Consensus 152 ~s~~t~I~Wk~gkd~ 166 (225)
T 2e50_A 152 SSKSTEIKWKSGKDM 166 (225)
T ss_dssp CEEECCCCBCSSCCC
T ss_pred ccCCCcceecCCCCc
Confidence 447899999999765
No 396
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=21.10 E-value=57 Score=20.26 Aligned_cols=16 Identities=19% Similarity=0.204 Sum_probs=13.6
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
.++++|++|+|++...
T Consensus 28 ~i~~~d~~g~i~~~N~ 43 (130)
T 1d06_A 28 ATVVSATDGTIVSFNA 43 (130)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEECCCCeEEEEcH
Confidence 6789999999998763
No 397
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=20.94 E-value=20 Score=27.27 Aligned_cols=15 Identities=7% Similarity=-0.117 Sum_probs=11.9
Q ss_pred ccCCccccCCCCCCC
Q psy2878 165 QTGKLCACNRTLNGK 179 (181)
Q Consensus 165 ~~~~~~~~~~~~~~~ 179 (181)
....+|+++|++|++
T Consensus 139 ~~s~~t~I~WK~g~~ 153 (264)
T 2zd7_A 139 LTSEPVPIEWPQSYD 153 (264)
T ss_dssp EEECCCCCCCCGGGG
T ss_pred eeEeecccccCCCcc
Confidence 455789999999765
No 398
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=20.91 E-value=3.2e+02 Score=21.78 Aligned_cols=37 Identities=22% Similarity=0.209 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHH
Q psy2878 59 TEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRE 95 (181)
Q Consensus 59 ~~~~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~ 95 (181)
.-.+.+.++.+.++++|+.+-.+|..+.+..+...++
T Consensus 256 ~~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~ 292 (387)
T 3nvb_A 256 KAFTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFER 292 (387)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 3468899999999999999999999998888888876
No 399
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=20.84 E-value=73 Score=21.54 Aligned_cols=16 Identities=13% Similarity=0.090 Sum_probs=13.4
Q ss_pred eeEEEEcCCCcEEEEE
Q psy2878 129 RATFIFDPQNIIQHIT 144 (181)
Q Consensus 129 p~~~liD~~g~i~~~~ 144 (181)
+..||+|.+|+|+...
T Consensus 56 ~r~~l~d~eG~Il~~~ 71 (138)
T 3v67_A 56 PRVFFSDYNGNVLTTD 71 (138)
T ss_dssp CEEEEECTTSCEECCC
T ss_pred ccEEEEcCCCCEecCC
Confidence 4799999999998544
No 400
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=20.59 E-value=68 Score=19.48 Aligned_cols=16 Identities=13% Similarity=0.191 Sum_probs=13.3
Q ss_pred eEEEEcCCCcEEEEEe
Q psy2878 130 ATFIFDPQNIIQHITV 145 (181)
Q Consensus 130 ~~~liD~~g~i~~~~~ 145 (181)
.++++|++|+|++...
T Consensus 29 ~i~~~d~~g~i~~~N~ 44 (126)
T 3bwl_A 29 MIDVLDADGTICEVNQ 44 (126)
T ss_dssp EEEEECTTCBEEEECH
T ss_pred EEEEEcCCCCEEEEcH
Confidence 5789999999998763
No 401
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=20.53 E-value=58 Score=22.28 Aligned_cols=17 Identities=18% Similarity=0.280 Sum_probs=14.0
Q ss_pred eee-EEEEcCCCcEEEEE
Q psy2878 128 LRA-TFIFDPQNIIQHIT 144 (181)
Q Consensus 128 ~p~-~~liD~~g~i~~~~ 144 (181)
.|+ ++|.|.+|++.++.
T Consensus 40 ~ptLvlIYDe~G~lLW~q 57 (148)
T 3bqa_A 40 SPTMTLIYDENGQLLWAQ 57 (148)
T ss_dssp CSCEEEEECTTSCEEEES
T ss_pred CCeEEEEEcCCCcEEEec
Confidence 344 78999999999887
No 402
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=20.48 E-value=76 Score=22.24 Aligned_cols=27 Identities=19% Similarity=0.218 Sum_probs=21.3
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHHHHH
Q psy2878 46 FYFYPKDFTFVCPTEISEYNKLVKDFN 72 (181)
Q Consensus 46 l~F~~~~~cp~C~~~~~~l~~l~~~~~ 72 (181)
|.+|.-.-||.|-.-.+.|.++.+++.
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 455557779999888899999888874
No 403
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=20.37 E-value=2.3e+02 Score=19.92 Aligned_cols=35 Identities=3% Similarity=-0.180 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHc
Q psy2878 62 SEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN 96 (181)
Q Consensus 62 ~~l~~l~~~~~~~~~~vi~Is~d~~~~~~~~~~~~ 96 (181)
+...+..++++++|+.++.+|--+......+.+..
T Consensus 23 ~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l 57 (231)
T 1wr8_A 23 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILI 57 (231)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHc
Confidence 34556666777789999888888877777776665
No 404
>3kyp_A Pfnaps, nucleosome assembly protein; histone recognition, chaperone; 2.80A {Plasmodium falciparum}
Probab=20.23 E-value=40 Score=24.23 Aligned_cols=14 Identities=0% Similarity=-0.213 Sum_probs=11.7
Q ss_pred CCccccCCCCCCCC
Q psy2878 167 GKLCACNRTLNGKT 180 (181)
Q Consensus 167 ~~~~~~~~~~~~~~ 180 (181)
..+|+++|++|.++
T Consensus 124 ~~~t~I~Wk~gk~~ 137 (193)
T 3kyp_A 124 VECTRIKWKEGKNP 137 (193)
T ss_dssp CCCCCCCCCSSCCC
T ss_pred eccceeeeecCCCc
Confidence 46799999999875
Done!