RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2878
(181 letters)
>d1uula_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin
peroxidase homologue) {Trypanosoma cruzi [TaxId: 5693]}
Length = 194
Score = 129 bits (324), Expect = 1e-38
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 8/172 (4%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
P FN FK + +S+ GKW + +FYP DFTFVCPTEI +++ VK+F++
Sbjct: 10 PDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCE 69
Query: 78 LLGGSSDNEFVKLAWR---RENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFI 133
+L S D+E+ LAW R+ L ++N +D ++ G+ E GVA R FI
Sbjct: 70 VLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFI 129
Query: 134 FDPQNIIQHITVNNLNVGRNPIETLRILDAIQT----GKLCACNRTLNGKTL 181
DP+ ++ ITVN+L VGR+ E LR++ A Q G++C N KT+
Sbjct: 130 IDPKQNLRQITVNDLPVGRDVDEALRLVKAFQFVEKHGEVCPANWKPGDKTM 181
>d1zyea1 c.47.1.10 (A:6-163) Peroxiredoxin-3 (AOP-1, SP-22) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 158
Score = 111 bits (279), Expect = 2e-32
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 5/153 (3%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
P F + FK I+ F GK+ + +FYP DFTFVCPTEI ++ +F++ N
Sbjct: 4 PYFKGTAVVS-GEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCE 62
Query: 78 LLGGSSDNEFVKLAWR---RENSNLYKLNHWQFSDTNGSLIDQL-GIRHETGVALRATFI 133
++ S D+ F LAW R+N L +N SD + + G+ALR FI
Sbjct: 63 VVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFI 122
Query: 134 FDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166
DP +I+H++VN+L VGR+ ETLR++ A Q
Sbjct: 123 IDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQF 155
>d1qmva_ c.47.1.10 (A:) Thioredoxin peroxidase 2 (thioredoxin
peroxidase B, 2-cys peroxiredoxin) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 197
Score = 112 bits (280), Expect = 4e-32
Identities = 62/177 (35%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 14 IGVK-PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFN 72
IG P F + AFK + S + GK+ + +FYP DFTFVCPTEI ++ +DF
Sbjct: 7 IGKPAPDFKATAVVD-GAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSNRAEDFR 65
Query: 73 ERNAILLGGSSDNEFVKLAWR---RENSNLYKLNHWQFSDTNGSLIDQLG-IRHETGVAL 128
+ +LG S D++F LAW R+ L LN +D L + G ++ + G+A
Sbjct: 66 KLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAY 125
Query: 129 RATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT----GKLCACNRTLNGKTL 181
R FI D + +++ ITVN+L VGR+ E LR++ A Q G++C T+
Sbjct: 126 RGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWKPGSDTI 182
>d1we0a1 c.47.1.10 (A:1-166) Alkyl hydroperoxide reductase AhpC
{Amphibacillus xylanus [TaxId: 1449]}
Length = 166
Score = 111 bits (277), Expect = 5e-32
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 13 VIGVK-PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDF 71
+IG + F + F +TE+ GKW I FYP DF+FVCPTE+ + K +
Sbjct: 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAEL 61
Query: 72 NERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRA 130
+ + S+D FV AW + + + + D + ++ Q + +E TG+A R
Sbjct: 62 KKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRG 121
Query: 131 TFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT-----GKLC 170
TFI DP +IQ I +N +GR+ + + A Q G++C
Sbjct: 122 TFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRENPGEVC 166
>d2h01a1 c.47.1.10 (A:2-171) Thioredoxin peroxidase 2 (thioredoxin
peroxidase B, 2-cys peroxiredoxin) {Plasmodium yoelii
[TaxId: 5861]}
Length = 170
Score = 109 bits (272), Expect = 3e-31
Identities = 62/164 (37%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Query: 18 PGFNLPEENNVSAFKVITESSFPG-KWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNA 76
P F + F ++ S F G K+ + YFYP DFTFVCP+EI +K + F ERN
Sbjct: 3 PSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNV 62
Query: 77 ILLGGSSDNEFVKLAWR---RENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFI 133
LLG S D++F LAW+ + + H SD + S+ + VALRA +
Sbjct: 63 ELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVL 122
Query: 134 FDPQNIIQHITVNNLNVGRNPIETLRILDAIQT----GKLCACN 173
D Q ++QH+ VNNL +GR+ E LR++DA+Q G +C N
Sbjct: 123 IDKQGVVQHLLVNNLALGRSVDEILRLIDALQHHEKYGDVCPAN 166
>d1zofa1 c.47.1.10 (A:1-170) Thioredoxin reductase TsaA
{Helicobacter pylori [TaxId: 210]}
Length = 170
Score = 108 bits (269), Expect = 8e-31
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 9/162 (5%)
Query: 18 PGFNLPE-ENNVSAFKVITESSFPGK-WKIFYFYPKDFTFVCPTEISEYNKLVKDFNERN 75
P F P N + S GK I +F+PKDFTFVCPTEI ++K VKDF+E+
Sbjct: 8 PDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKG 67
Query: 76 AILLGGSSDNEFVKLAWR---RENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATF 132
++G S D+E V AW+ E + +++ +D S+ + E +ALR F
Sbjct: 68 FNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAF 127
Query: 133 IFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT----GKLC 170
+ D ++H +N+L +GRN E LR++DA+ G++C
Sbjct: 128 LIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHGEVC 169
>d1n8ja_ c.47.1.10 (A:) Alkyl hydroperoxide reductase AhpC
{Salmonella typhimurium [TaxId: 90371]}
Length = 186
Score = 106 bits (266), Expect = 4e-30
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 14 IGVK-PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFN 72
I K F N F +TE G+W +F+FYP DFTFV PTE+ + ++
Sbjct: 3 INTKIKPFKNQAFKN-GEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQ 61
Query: 73 ERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHET-GVALRAT 131
+ + S+D F AW + + K+ + D G+L E G+A RAT
Sbjct: 62 KLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRAT 121
Query: 132 FIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ-----TGKLCACNRTLNGKTL 181
F+ DPQ IIQ I V +GR+ + LR + A Q G++C TL
Sbjct: 122 FVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATL 176
>d2zcta1 c.47.1.10 (A:6-242) Peroxiredoxin {Aeropyrum pernix [TaxId:
56636]}
Length = 237
Score = 105 bits (262), Expect = 6e-29
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 11/169 (6%)
Query: 14 IGVK-PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFN 72
IG + P + ++ K+ GKW + + +P DFT VC TE + + +DF
Sbjct: 3 IGERFPEMEVTTDHG--VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQ 60
Query: 73 ERNAILLGGSSDNEFVKLAWRRENSN--LYKLNHWQFSDTNGSLIDQLGIRHETG--VAL 128
L+G S D+ F + W+ ++ +D G++ +LG+ H +
Sbjct: 61 RLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTV 120
Query: 129 RATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT----GKLCACN 173
R FI D + +I+ + + +GR E LRI+ A++ + +
Sbjct: 121 RGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPAD 169
>d1e2ya_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin
peroxidase homologue) {Crithidia fasciculata [TaxId:
5656]}
Length = 167
Score = 101 bits (251), Expect = 5e-28
Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
P F+ FK ++ SS+ GK+ + +FYP DFTFVCPTEI +++ K F E N
Sbjct: 10 PEFDDMALMPNGTFKKVSLSSYKGKYVVLFFYPMDFTFVCPTEIIQFSDDAKRFAEINTE 69
Query: 78 LLGGSSDNEFVKLAWR---RENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFI 133
++ S D+E+ L W R+ L + +D ++ G+ E +GVA R FI
Sbjct: 70 VISCSCDSEYSHLQWTSVDRKKGGLGPMAIPMLADKTKAIARAYGVLDEDSGVAYRGVFI 129
Query: 134 FDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166
DP ++ I +N++ +GRN E +R+++A+Q
Sbjct: 130 IDPNGKLRQIIINDMPIGRNVEEVIRLVEALQF 162
>d2bmxa1 c.47.1.10 (A:2-170) Alkyl hydroperoxide reductase AhpC
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 169
Score = 99.4 bits (246), Expect = 2e-27
Identities = 67/168 (39%), Positives = 98/168 (58%), Gaps = 2/168 (1%)
Query: 1 MKTIGQSLSSYRVIGVKPG--FNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCP 58
+ TIG +Y++ + G + + F IT PGKW++ +F+PKDFTFVCP
Sbjct: 2 LLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCP 61
Query: 59 TEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQL 118
TEI+ ++KL +F +R+A +LG S D+EF WR ++++L L SD L
Sbjct: 62 TEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAA 121
Query: 119 GIRHETGVALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT 166
G+ + GVA R TFI DP N IQ ++ +VGRN E LR+LDA+Q+
Sbjct: 122 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 169
>d1xcca_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Plasmodium yoelii
yoelii [TaxId: 73239]}
Length = 219
Score = 98.7 bits (245), Expect = 1e-26
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 16/170 (9%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
P F F+ W I + +P DFT VC TE++E K+ +DF + N
Sbjct: 9 PNFTAKASGIDGDFE--LYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCK 66
Query: 78 LLGGSSDNEFVKLAWR---RENSNLYKLNHWQFSDTNGSLIDQLGIRHE-------TGVA 127
L+G S +++ W + L K D + L ++L I E +
Sbjct: 67 LIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLT 126
Query: 128 LRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT----GKLCACN 173
R F P+ I+ + GRN E LR+L ++Q N
Sbjct: 127 CRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVATPVN 176
>d1prxa_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 220
Score = 92.9 bits (230), Expect = 2e-24
Identities = 42/181 (23%), Positives = 63/181 (34%), Gaps = 21/181 (11%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
P F ++ W I + +P+DFT VC TE+ KL +F +RN
Sbjct: 8 PNFEANTTVG----RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVK 63
Query: 78 LLGGSSDNEFVKLAWR------RENSNLYKLNHWQFSDTNGSLIDQLGIRHETG------ 125
L+ S D+ LAW KL D N L LG+
Sbjct: 64 LIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGM 123
Query: 126 -VALRATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQT----GKLCACNRTLNGKT 180
V R F+F P ++ + GRN E LR++ ++Q +
Sbjct: 124 PVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSV 183
Query: 181 L 181
+
Sbjct: 184 M 184
>d1hd2a_ c.47.1.10 (A:) Peroxiredoxin 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 161
Score = 65.7 bits (159), Expect = 1e-14
Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 11/155 (7%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISE-YNKLVKDFNERNA 76
P + E + KV F GK + + P FT C + + + +
Sbjct: 10 PAVEVFEGEPGN--KVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGV 67
Query: 77 ILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGS-------LIDQLGIRHETGVALR 129
++ S N + ++ + +D G+ L+D + L+
Sbjct: 68 QVVACLSVN-DAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLK 126
Query: 130 ATFIFDPQNIIQHITVNNLNVGRNPIETLRILDAI 164
+ I++ + V G I+ +
Sbjct: 127 RFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 161
>d1q98a_ c.47.1.10 (A:) Thiol peroxidase Tpx {Haemophilus influenzae
[TaxId: 727]}
Length = 164
Score = 64.1 bits (155), Expect = 6e-14
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 14/154 (9%)
Query: 14 IGVK-PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFN 72
+G F L + + + F K K+ +P T VC T + ++N+ +
Sbjct: 18 VGEIVENFILVGND----LADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLS 73
Query: 73 ERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETG----VAL 128
N I+L S+D F + + + N +L QLG+ +TG +
Sbjct: 74 --NTIVLCISADLPFAQARFCGAEGIEN--AKTVSTFRNHALHSQLGVDIQTGPLAGLTS 129
Query: 129 RATFIFDPQNIIQHI-TVNNLNVGRNPIETLRIL 161
RA + D QN + H V + N L +L
Sbjct: 130 RAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVL 163
>d1psqa_ c.47.1.10 (A:) Probable thiol peroxidase PsaD
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 163
Score = 62.6 bits (151), Expect = 2e-13
Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 13/166 (7%)
Query: 1 MKTIGQSLSSYRVIGVK-PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPT 59
+ G+ L +G K F+L + + + F GK K+ P T +C T
Sbjct: 9 VSFTGKQLQ----VGDKALDFSLTTTD----LSKKSLADFDGKKKVLSVVPSIDTGICST 60
Query: 60 EISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119
+ +N+ + + L S D F + W + + D + D
Sbjct: 61 QTRRFNEELAGLDNTVV--LTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFG-RDYAL 117
Query: 120 IRHETGVALRATFIFDPQNIIQHI-TVNNLNVGRNPIETLRILDAI 164
+ +E + RA F+ D N I+++ V+N+N N + A+
Sbjct: 118 LINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163
>d1qxha_ c.47.1.10 (A:) Thiol peroxidase Tpx {Escherichia coli
[TaxId: 562]}
Length = 164
Score = 56.8 bits (136), Expect = 3e-11
Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 18/159 (11%)
Query: 1 MKTIGQSLSSYRVIGVK-PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPT 59
+ G K F L ++ +T F GK K+ +P T VC
Sbjct: 11 VTVANSIPQ----AGSKAQTFTLVAKD----LSDVTLGQFAGKRKVLNIFPSIDTGVCAA 62
Query: 60 EISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLG 119
+ ++N+L + + N ++L S+D F + + + + N + G
Sbjct: 63 SVRKFNQLATEID--NTVVLCISADLPFAQSRFCGAEGLNNVITLS--TFRNAEFLQAYG 118
Query: 120 IRHETG----VALRATFIFDPQNIIQHITVNNLNVGRNP 154
+ G +A RA + D + + + + + P
Sbjct: 119 VAIADGPLKGLAARAVVVIDENDNVIFSQLVD-EITTEP 156
>d1xvwa1 c.47.1.10 (A:1-153) Putative peroxiredoxin Rv2238c/MT2298
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 153
Score = 55.9 bits (133), Expect = 5e-11
Identities = 31/154 (20%), Positives = 57/154 (37%), Gaps = 7/154 (4%)
Query: 14 IGVK-PGFNLPEENNVSAFKVITESSFPG-KWKIFYFYPKDFTFVCPTEISEYNKLVKDF 71
+G P F L ++N +++T + G K + F+P FT +C E+ + + +F
Sbjct: 4 VGATAPDFTLRDQNQ----QLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEF 59
Query: 72 NERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRAT 131
++ L S W ++ + L F + G+A R T
Sbjct: 60 ENDDSAALAISVGPPPTHKIWATQSGFTFPLL-SDFWPHGAVSQAYGVFNEQAGIANRGT 118
Query: 132 FIFDPQNIIQHITVNNLNVGRNPIETLRILDAIQ 165
F+ D II+ + R+ L A+
Sbjct: 119 FVVDRSGIIRFAEMKQPGEVRDQRLWTDALAALT 152
>d1xvqa_ c.47.1.10 (A:) Thiol peroxidase Tpx {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 166
Score = 54.9 bits (131), Expect = 1e-10
Identities = 27/149 (18%), Positives = 44/149 (29%), Gaps = 9/149 (6%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
P F L + VI+ F GK + +P T VC T + +++
Sbjct: 24 PAFTLTGGD----LGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAASGATVLC 79
Query: 78 LLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-TGVALRATFIFDP 136
S D F + + + F D+ G G+ RA +
Sbjct: 80 ---VSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGA 136
Query: 137 QNIIQHI-TVNNLNVGRNPIETLRILDAI 164
+ + V + N L L A
Sbjct: 137 DGNVAYTELVPEIAQEPNYEAALAALGAT 165
>d2a4va1 c.47.1.10 (A:59-214) Peroxiredoxin dot5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 156
Score = 54.6 bits (130), Expect = 2e-10
Identities = 28/158 (17%), Positives = 60/158 (37%), Gaps = 15/158 (9%)
Query: 14 IGVK-PGFNLPEENNVSAFKVITESSFPG--KWKIFYFYPKDFTFVCPTEISEYNKLVKD 70
IG P +L E+N I+ + +F+ YP+ T + S + ++
Sbjct: 7 IGDPIPDLSLLNEDN----DSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQE 62
Query: 71 FNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRH-ETGVALR 129
E A+ + +++ + L + SD I LG + ++R
Sbjct: 63 LKEYAAV-----FGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSGSIR 117
Query: 130 ATFIF-DPQNIIQHITVN-NLNVGRNPIETLRILDAIQ 165
+ FIF D + + + ++ ++V E L + + +
Sbjct: 118 SHFIFVDGKLKFKRVKISPEVSVNDAKKEVLEVAEKFK 155
>d2cx4a1 c.47.1.10 (A:4-163) Bacterioferritin comigratory protein
{Archaeon Aeropyrum pernix [TaxId: 56636]}
Length = 160
Score = 52.0 bits (123), Expect = 1e-09
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 14 IGVK-PGFNLPEENNVSAFKVITESSFP--GKWKIFYFYPKDFTFVCPTEISEYNKLVKD 70
+G K P F LP ++ F+ + G+ + F+P F+ VC E+ + +
Sbjct: 4 LGEKAPDFTLPNQD----FEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQ 59
Query: 71 FNERNAILLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHE-----TG 125
+ NA +L S D+ + ++ EN +L SD N +I + HE
Sbjct: 60 LEKANAEVLAISVDSPWCLKKFKDEN----RLAFNLLSDYNREVIKLYNVYHEDLKGLKM 115
Query: 126 VALRATFIFDPQNIIQHITVNNLNVGR-NPIETLRILDAIQTGKL 169
VA RA FI P + + V + + + E +R + I G+L
Sbjct: 116 VAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA-GEL 159
>d1tp9a1 c.47.1.10 (A:1-162) Plant peroxiredoxin {Western balsam
poplar(Populus trichocarpa) [TaxId: 3694]}
Length = 162
Score = 45.7 bits (107), Expect = 4e-07
Identities = 21/138 (15%), Positives = 39/138 (28%), Gaps = 10/138 (7%)
Query: 18 PGFNLPE-ENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERN- 75
P L + +V S GK I + P FT C + +
Sbjct: 11 PDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG 70
Query: 76 -AILLGGSSDNEFVKLAWRRENSNLYKLNHWQ-----FSDTNGSLIDQLGIRHETGVALR 129
+L S ++ FV AW + + ++ G +D + R
Sbjct: 71 VTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQEKGLG-TRSRR 129
Query: 130 ATFIFDPQNIIQHITVNN 147
+ D ++ +
Sbjct: 130 FALLVD-DLKVKAANIEG 146
>d1nm3a2 c.47.1.10 (A:3-165) N-terminal, Prx domain of Hybrid-Prx5
{Haemophilus influenzae [TaxId: 727]}
Length = 163
Score = 45.3 bits (106), Expect = 5e-07
Identities = 21/153 (13%), Positives = 37/153 (24%), Gaps = 6/153 (3%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEI---SEYNKLVKDFNER 74
P V T F K I + P FT C + V
Sbjct: 8 PQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGV 67
Query: 75 NAILLGGSSDNEFVKLAWRRENSNLYKLN-HWQFSDTNGSLIDQLGIRHETGVALRATFI 133
+ IL+ +D + E S T G + G +
Sbjct: 68 DDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSM 127
Query: 134 FDPQNIIQHITVNNLNVGRNPIETL--RILDAI 164
+++ + + G + +L +
Sbjct: 128 LVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYL 160
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 39.9 bits (92), Expect = 3e-05
Identities = 15/114 (13%), Positives = 37/114 (32%), Gaps = 5/114 (4%)
Query: 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLA 91
+V E K + +F+ K ++ N + + + +
Sbjct: 20 EVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPG 79
Query: 92 WRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITV 145
+E + + + F D++ +L D + A ++FD ++H
Sbjct: 80 KIKETAAEHDITQPIFVDSDHALTDAFENE-----YVPAYYVFDKTGQLRHFQA 128
>d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein
TlpA, soluble domain {Bradyrhizobium japonicum [TaxId:
375]}
Length = 176
Score = 38.9 bits (89), Expect = 8e-05
Identities = 18/146 (12%), Positives = 38/146 (26%), Gaps = 9/146 (6%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
P + + K S F GK + + + K +
Sbjct: 37 PDLAFEDADG----KPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEV 92
Query: 78 LLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQ 137
+ + K + +NL F+D + L + + + + DPQ
Sbjct: 93 VAINIDTRDPEKPKTFLKEANLT--RLGYFNDQKAKVFQDLKAIG-RALGMPTSVLVDPQ 149
Query: 138 NIIQHITVNNLNVGRNPIETLRILDA 163
+ L+++ A
Sbjct: 150 GCEIATIAGPAE--WASEDALKLIRA 173
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 134
Score = 35.3 bits (80), Expect = 0.001
Identities = 17/126 (13%), Positives = 35/126 (27%), Gaps = 15/126 (11%)
Query: 18 PGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAI 77
F + +S GK + +F+ T CP +E L + A+
Sbjct: 5 LQFTATTLSG----APFDGASLQGKPAVLWFW----TPWCPFCNAEAPSLSQVAAANPAV 56
Query: 78 LLGGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQ 137
+ + + Y LN +D +G + + + A +
Sbjct: 57 --TFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVP-----WQPAFVFYRAD 109
Query: 138 NIIQHI 143
+
Sbjct: 110 GTSTFV 115
>d1wp0a1 c.47.1.10 (A:138-297) Thioredoxin-like protein Sco1
(YpmQ), soluble domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 160
Score = 33.9 bits (76), Expect = 0.005
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 20 FNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERN 75
F+L + T+ + G+W + YF VCP E+ + ++V + +
Sbjct: 3 FSLTTHTG----ERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSIT 54
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 31.0 bits (69), Expect = 0.044
Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 9/121 (7%)
Query: 32 KVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS---DNEFV 88
+ + K + F+ + +C +E+ + K +D +A L+ +S +E
Sbjct: 14 RPASVYLKKDKPTLIKFWA-SWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLHEKK 72
Query: 89 KLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNIIQHITVNNL 148
+++ + L +D G++ L I + + +Q I ++
Sbjct: 73 DGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNIS-----VYPSWALIGKDGDVQRIVKGSI 127
Query: 149 N 149
N
Sbjct: 128 N 128
>d2b7ka1 c.47.1.10 (A:111-279) Thioredoxin-like protein Sco1 (YpmQ),
soluble domain {Baker's yeast(Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 169
Score = 30.9 bits (68), Expect = 0.051
Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 4/98 (4%)
Query: 20 FNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79
F+L + TE + GK+ I YF + +CP E+ + + + + I L
Sbjct: 9 FHLEDMYG----NEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITL 64
Query: 80 GGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQ 117
H G+ +
Sbjct: 65 QPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEV 102
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase
flavoprotein, N-terminal domain {Hydrogenophaga
pseudoflava [TaxId: 47421]}
Length = 177
Score = 30.9 bits (69), Expect = 0.055
Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Query: 49 YPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSSDNEFVKLAWRREN-SNLYKLNHWQ 106
P F + P + E L+ +L GG S + R +L +N
Sbjct: 2 IPPRFEYHAPKSVGEAVALLGQLGSDAKLLAGGHSL--LPMMKLRFAQPEHLIDINRIP 58
>d1zzoa1 c.47.1.10 (A:45-178) Lipoprotein DsbF {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 134
Score = 28.9 bits (63), Expect = 0.19
Identities = 15/125 (12%), Positives = 28/125 (22%), Gaps = 14/125 (11%)
Query: 20 FNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKDFNERNAILL 79
F+ + S GK + +F+
Sbjct: 8 FSAKTLDG----HDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVG-- 61
Query: 80 GGSSDNEFVKLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETGVALRATFIFDPQNI 139
A + + Q +DT+GS+ G+ A DP
Sbjct: 62 ---VAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVT-----QQPAYAFVDPHGN 113
Query: 140 IQHIT 144
+ +
Sbjct: 114 VDVVR 118
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain
{Escherichia coli [TaxId: 562]}
Length = 76
Score = 27.3 bits (60), Expect = 0.37
Identities = 9/69 (13%), Positives = 23/69 (33%)
Query: 11 YRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFYFYPKDFTFVCPTEISEYNKLVKD 70
+ + G+ + L + F+ + P K+ + I++ + ++
Sbjct: 4 FTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRH 63
Query: 71 FNERNAILL 79
R LL
Sbjct: 64 PLMRAEYLL 72
>d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase
flavoprotein, N-terminal domain {Oligotropha
carboxidovorans, formerly Pseudomonas carboxydovorans
[TaxId: 40137]}
Length = 177
Score = 28.3 bits (62), Expect = 0.43
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 49 YPKDFTFVCPTEISEYNKLVKDFNERNAILLGGSS 83
P F + P I++ L+ E L GG S
Sbjct: 2 IPGSFDYHRPKSIADAVALLTKLGEDARPLAGGHS 36
>d1xiya1 c.47.1.10 (A:2-180) 1-Cys peroxiredoxin {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 179
Score = 27.0 bits (59), Expect = 1.1
Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 16/137 (11%)
Query: 32 KVITESSFPGKWKIFYFYPKDFTFVCPT-EISEYNKLVKDFNERNAI--LLGGSSDNEFV 88
+ T F K + P FT C T I Y + F + N + ++++ +V
Sbjct: 33 SIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYV 92
Query: 89 KLAWRRENSNLYKLNHWQFSDTNGSLIDQLGIRHETG------VALRATFIFDPQNIIQH 142
+W + SD N S D + + + R I + NI+
Sbjct: 93 LKSWFKSMDIKKIK---YISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVK 148
Query: 143 ITV---NNLNVGRNPIE 156
+ N+ +P +
Sbjct: 149 MFQEKDKQHNIQTDPYD 165
>d1iaka2 d.19.1.1 (A:1-81) Class II MHC alpha chain, N-terminal
domain {Mouse (Mus musculus), I-AK [TaxId: 10090]}
Length = 82
Score = 25.4 bits (56), Expect = 1.5
Identities = 7/19 (36%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
Query: 134 FDPQNIIQHITV--NNLNV 150
F+PQ +Q+I +NL +
Sbjct: 55 FEPQGGLQNIATGKHNLEI 73
>d1fnga2 d.19.1.1 (A:1-81) Class II MHC alpha chain, N-terminal
domain {Mouse (Mus musculus), I-EK [TaxId: 10090]}
Length = 81
Score = 24.7 bits (54), Expect = 3.0
Identities = 7/19 (36%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Query: 134 FDPQNIIQHITV--NNLNV 150
F+ Q + +I V NL+V
Sbjct: 54 FEAQGALANIAVDKANLDV 72
>d1eu8a_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP
{Archaeon Thermococcus litoralis [TaxId: 2265]}
Length = 407
Score = 25.6 bits (54), Expect = 3.8
Identities = 4/18 (22%), Positives = 10/18 (55%)
Query: 58 PTEISEYNKLVKDFNERN 75
P EI + ++ +F ++
Sbjct: 14 PNEIEYWKGVIAEFEKKY 31
>d1dula_ a.36.1.1 (A:) Signal sequence binding protein Ffh
{Escherichia coli [TaxId: 562]}
Length = 69
Score = 23.9 bits (52), Expect = 4.2
Identities = 4/15 (26%), Positives = 11/15 (73%)
Query: 59 TEISEYNKLVKDFNE 73
++ + N+L+K F++
Sbjct: 47 MQVQDVNRLLKQFDD 61
>d1uvqa2 d.19.1.1 (A:2-84) Class II MHC alpha chain, N-terminal
domain {Human (Homo sapiens), HLA-DQ6 [TaxId: 9606]}
Length = 83
Score = 24.2 bits (53), Expect = 4.6
Identities = 8/19 (42%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Query: 134 FDPQNIIQHITV--NNLNV 150
FDPQ ++++ V +NLN+
Sbjct: 56 FDPQGALRNMAVAKHNLNI 74
>d1f0la2 d.166.1.1 (A:1-187) Diphtheria toxin, N-terminal domain
{Corynebacterium diphtheriae [TaxId: 1717]}
Length = 187
Score = 24.7 bits (53), Expect = 6.9
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 6 QSLSSYRVIGVKPGFNLPEENNVSAFKVITESSFPGKWKIFY 47
++ SSY G KPG+ + + K T+ ++ WK FY
Sbjct: 15 ENFSSYH--GTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFY 54
>d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 122
Score = 24.2 bits (52), Expect = 7.7
Identities = 2/16 (12%), Positives = 6/16 (37%)
Query: 42 KWKIFYFYPKDFTFVC 57
+++ Y D +
Sbjct: 32 GYELHYMEMGDLYLIN 47
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.415
Gapped
Lambda K H
0.267 0.0487 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 689,433
Number of extensions: 30949
Number of successful extensions: 123
Number of sequences better than 10.0: 1
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 40
Length of query: 181
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 101
Effective length of database: 1,309,196
Effective search space: 132228796
Effective search space used: 132228796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.6 bits)