BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2881
(302 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P57011|FTSY_NEIMB Signal recognition particle receptor FtsY OS=Neisseria meningitidis
serogroup B (strain MC58) GN=ftsY PE=3 SV=1
Length = 421
Score = 304 bits (778), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/304 (48%), Positives = 215/304 (70%), Gaps = 6/304 (1%)
Query: 2 KINWITRLKESLSKT----ACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNE 57
K+ W RLK+ L+K+ A +L + +ID++LY ELE+ L+ +D+G E T++L+ +
Sbjct: 119 KLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKD 178
Query: 58 LKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCK-PFVIMIVGVNGVGKTTTI 116
++ + K L + ++R L L +L+K LEKPL+ + K PFVIM+ G+NG GKTT+I
Sbjct: 179 VRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSI 238
Query: 117 GKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINI 176
GKLA YF+ + KSVLLAA DTFRAAA EQL G+ N+V VIS+ D AA+ F+A+
Sbjct: 239 GKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQT-TGDSAAVCFDAVQA 297
Query: 177 AQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQ 236
A+ + DIV+ DT+GRL TQ HLM E+KK+K+V++K + + P+EI +++D N GQN ++Q
Sbjct: 298 AKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQ 357
Query: 237 IKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVN 296
+K F L +TGLI+TKLDGT KGGILAA+A +P+ +IG+GE I+DL+ F+A FV+
Sbjct: 358 VKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVD 417
Query: 297 ALLN 300
ALL+
Sbjct: 418 ALLD 421
>sp|P57010|FTSY_NEIMA Signal recognition particle receptor FtsY OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=ftsY PE=3
SV=1
Length = 421
Score = 303 bits (777), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 147/304 (48%), Positives = 215/304 (70%), Gaps = 6/304 (1%)
Query: 2 KINWITRLKESLSKT----ACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNE 57
K+ W RLK+ L+K+ A +L + +ID++LY ELE+ L+ +D+G E T++L+ +
Sbjct: 119 KLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKD 178
Query: 58 LKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCK-PFVIMIVGVNGVGKTTTI 116
++ + K L + ++R L L +L+K LEKPL+ + K PFVIM+ G+NG GKTT+I
Sbjct: 179 VRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSI 238
Query: 117 GKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINI 176
GKLA YF+ + KSVLLAA DTFRAAA EQL G+ N+V VIS+ D AA+ F+A+
Sbjct: 239 GKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQT-TGDSAAVCFDAVQA 297
Query: 177 AQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQ 236
A+ + DIV+ DT+GRL TQ HLM E+KK+K+V++K + + P+EI +++D N GQN ++Q
Sbjct: 298 AKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQ 357
Query: 237 IKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVN 296
+K F L +TGLI+TKLDGT KGGILAA+A +P+ +IG+GE I+DL+ F+A FV+
Sbjct: 358 VKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVD 417
Query: 297 ALLN 300
ALL+
Sbjct: 418 ALLD 421
>sp|O30391|FTSY_NEIMC Signal recognition particle receptor FtsY OS=Neisseria meningitidis
serogroup C GN=ftsY PE=3 SV=1
Length = 421
Score = 300 bits (769), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/304 (48%), Positives = 214/304 (70%), Gaps = 6/304 (1%)
Query: 2 KINWITRLKESLSKT----ACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNE 57
K+ W RLK+ L+K+ A +L + +ID++LY ELE+ L+ +D+ E T++L+ +
Sbjct: 119 KLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELETVLITSDMDMEATEYLMKD 178
Query: 58 LKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCK-PFVIMIVGVNGVGKTTTI 116
++ + K L + ++R L L +L+K LEKPL+ + K PFVIM+ G+NG GKTT+I
Sbjct: 179 VRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSI 238
Query: 117 GKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINI 176
GKLA YF+ + KSVLLAA DTFRAAA EQL G+ N+V VIS+ D AA+ F+A+
Sbjct: 239 GKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQT-TGDSAAVCFDAVQA 297
Query: 177 AQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQ 236
A+ + DIV+ DT+GRL TQ HLM E+KK+K+V++K + + P+EI +++D N GQN ++Q
Sbjct: 298 AKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQ 357
Query: 237 IKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVN 296
+K F L +TGLI+TKLDGT KGGILAA+A +P+ +IG+GE I+DL+ F+A FV+
Sbjct: 358 VKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVD 417
Query: 297 ALLN 300
ALL+
Sbjct: 418 ALLD 421
>sp|P14929|FTSY_NEIGO Signal recognition particle receptor FtsY OS=Neisseria gonorrhoeae
GN=ftsY PE=1 SV=2
Length = 416
Score = 294 bits (752), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 147/304 (48%), Positives = 209/304 (68%), Gaps = 7/304 (2%)
Query: 2 KINWITRLKESLSKT----ACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNE 57
K+ W RLK+ L+K+ A +L + +I ++LY ELE+ L+ D+G E T++L+ +
Sbjct: 115 KLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLITGDMGMEATEYLMKD 174
Query: 58 LKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCK-PFVIMIVGVNGVGKTTTI 116
++ + K L + ++R L L +L+K LEKPL+ + K PFVIM+ G+NG GKTT+I
Sbjct: 175 VRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSI 234
Query: 117 GKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINI 176
GKLA YF+ + KSVLLAA DTFRAAA EQL G N+V VIS+ D AA+ F+A+
Sbjct: 235 GKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQT-TGDSAAVCFDAVQA 293
Query: 177 AQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQ 236
A K DIV+ DT+GRL TQ HLM E+KK+K+V++K I P+EI +++D N GQN ++Q
Sbjct: 294 A-KARIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQ 352
Query: 237 IKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVN 296
+K F L +TGLI+TKLDGT KGGILAA+A +P+ +IG+GE I+DL+ F+A FV+
Sbjct: 353 VKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVD 412
Query: 297 ALLN 300
LL+
Sbjct: 413 RLLD 416
>sp|P10121|FTSY_ECOLI Signal recognition particle receptor FtsY OS=Escherichia coli
(strain K12) GN=ftsY PE=1 SV=1
Length = 497
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 208/302 (68%), Gaps = 4/302 (1%)
Query: 2 KINWITRLKESLSKTACNLKS----LIVNKKIDKNLYNELESDLLKADVGFETTQFLLNE 57
K + RLK SL KT NL S L KKID +L+ ELE LL ADVG ETT+ ++
Sbjct: 192 KEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKIITN 251
Query: 58 LKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIG 117
L + K+L + E + +L + +L +++PL + PFVI++VGVNGVGKTTTIG
Sbjct: 252 LTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIG 311
Query: 118 KLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIA 177
KLA F+++ KSV+LAA DTFRAAA EQL + G+ N++PVI++ D A++ F+AI A
Sbjct: 312 KLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAA 371
Query: 178 QKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQI 237
+ +N D++I DT+GRL +SHLM ELKKI +V++K E P+E+ L ID +TGQN +SQ
Sbjct: 372 KARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQA 431
Query: 238 KEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNA 297
K F + + +TG+ +TKLDGT KGG++ ++A ++ IP+ +IG+GE+IEDL+ F A DF+ A
Sbjct: 432 KLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEA 491
Query: 298 LL 299
L
Sbjct: 492 LF 493
>sp|Q8KA77|FTSY_BUCAP Signal recognition particle receptor FtsY OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsY PE=3 SV=1
Length = 351
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 206/302 (68%), Gaps = 4/302 (1%)
Query: 2 KINWITRLKESLSKT----ACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNE 57
KI+++ +LK SL+KT ++ + ++KKID + ELE +L +D+G TT ++++
Sbjct: 48 KIDFLFKLKNSLNKTKQFFGDSISRIFLSKKIDDAFFEELEDTMLLSDIGVHTTDQIISK 107
Query: 58 LKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIG 117
L K+L N E+V +L + ++L +EKPL PFVI++VG+NG GKTTT+
Sbjct: 108 LINDATHKELKNPEKVYFLLKEHMYSILNRVEKPLKISNHTPFVILVVGINGTGKTTTVS 167
Query: 118 KLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIA 177
KLA +K KSV+LAA DTFRAA EQL ILGK N++PVIS+ +DPA++AF+A+ A
Sbjct: 168 KLAKKYKLAGKSVMLAAADTFRAAGIEQLQILGKRNNIPVISQSSGSDPASVAFDAVKSA 227
Query: 178 QKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQI 237
K D++I+DT+GRL + HL+ ELKK+ +VI+K P+EI LIID GQNT+ Q
Sbjct: 228 ISKKIDVLIIDTAGRLHNKLHLLEELKKMVRVIKKLNLSAPHEIMLIIDACNGQNTIKQT 287
Query: 238 KEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNA 297
+ F K + +TGL+ITKLDGT KGG++ ++A ++ IP+ +IGIGEK DL +FN+ DF+ +
Sbjct: 288 EMFHKAINLTGLVITKLDGTAKGGVIFSLANQFLIPIRYIGIGEKTTDLVVFNSNDFIKS 347
Query: 298 LL 299
+
Sbjct: 348 IF 349
>sp|P57137|FTSY_BUCAI Signal recognition particle receptor FtsY OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=ftsY PE=3
SV=1
Length = 378
Score = 260 bits (665), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 194/277 (70%)
Query: 23 LIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLV 82
+ ++KKID+ L+ ELE +L AD+G TT +++ L K + + L N+E++ +L +
Sbjct: 101 IFLSKKIDEVLFEELEEKMLLADIGINTTNRIISNLIKDVNREDLKNSEKLYFLLKRKMF 160
Query: 83 NLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAA 142
N+LK +E PL PFVI++VGVNG GKTTT+ KLA +K KS++LAA DTFRAA
Sbjct: 161 NILKKVEIPLEISSHSPFVILVVGVNGTGKTTTVAKLAEKYKLEGKSIMLAAADTFRAAG 220
Query: 143 YEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRE 202
EQL LGK N++PVI+++ +DPAA+ F+A+ A+ K D++I+DT+GRL + HL+ E
Sbjct: 221 IEQLQTLGKLNNIPVIAQRSGSDPAAVIFDAVKSAKSKKIDVLIIDTAGRLHNKLHLIEE 280
Query: 203 LKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGI 262
LKKI +VI+K P+E LIID GQNT+ Q + F K L +TG+IITKLDGT KGG+
Sbjct: 281 LKKIVRVIKKIDISAPHEKLLIIDSCNGQNTIQQTEIFHKALNLTGIIITKLDGTAKGGV 340
Query: 263 LAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALL 299
+ ++A ++ IP+ +IGIGEK++DL FN+ +F+ ++
Sbjct: 341 VFSLADQFQIPIRYIGIGEKMQDLGHFNSQEFIESIF 377
>sp|P51835|FTSY_BACSU Signal recognition particle receptor FtsY OS=Bacillus subtilis
(strain 168) GN=ftsY PE=1 SV=2
Length = 329
Score = 244 bits (623), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/263 (46%), Positives = 184/263 (69%), Gaps = 3/263 (1%)
Query: 41 LLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEK---PLIFKKC 97
L+ ADVGF T L++ELKK + + + + ++V++V+ LV + S ++ L +
Sbjct: 59 LISADVGFTTVMELIDELKKEVKRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDG 118
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPV 157
+ VI++VGVNGVGKTTTIGKLA+ K+ KSV+LAA DTFRA A EQL + G+ VPV
Sbjct: 119 RLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVPV 178
Query: 158 ISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFEL 217
I + +DPAA+ ++A++ A+ +N D++I DT+GRL + +LM+EL+K+K+VIE+++ E
Sbjct: 179 IKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEA 238
Query: 218 PYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFI 277
P+E+ L +D TGQN ++Q KEFSK +TG+ +TKLDGT KGGI+ AI + IP+ +
Sbjct: 239 PHEVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLV 298
Query: 278 GIGEKIEDLQIFNAVDFVNALLN 300
G+GEK++DLQ F+ +V L +
Sbjct: 299 GLGEKVDDLQEFDPESYVYGLFS 321
>sp|P44870|FTSY_HAEIN Signal recognition particle receptor FtsY OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ftsY PE=3
SV=1
Length = 414
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/301 (45%), Positives = 202/301 (67%), Gaps = 5/301 (1%)
Query: 4 NWITRLKESLSKTACNL----KSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELK 59
+ +RL + L KT N+ + + KKID L+ ELE LL AD+G TT ++ L
Sbjct: 109 GFFSRLVKGLLKTKQNIGAGFRGFFLGKKIDDELFEELEEQLLIADIGVPTTSKIIKNLT 168
Query: 60 KIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPL-IFKKCKPFVIMIVGVNGVGKTTTIGK 118
+ K+L + E + L + ++L+ + +PL I KP+VI++VGVNGVGKTTTIGK
Sbjct: 169 EHASRKELQDAELLYQQLKVEMADILEPVAQPLEIDSTKKPYVILMVGVNGVGKTTTIGK 228
Query: 119 LANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQ 178
LA F+ KSV+LAA DTFRAAA EQL + G+ N +PV+++ +D A++ F+A+ A
Sbjct: 229 LARKFQAEGKSVMLAAGDTFRAAAVEQLQVWGERNHIPVVAQSTGSDSASVIFDAMQSAA 288
Query: 179 KKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIK 238
+N DI+I DT+GRL +++LM ELKKI +V++K P+EI L +D TGQN +SQ K
Sbjct: 289 ARNIDILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAK 348
Query: 239 EFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNAL 298
F++ + +TG+ +TKLDGT KGG++ AIA ++ +P+ +IG+GEKIEDL+ FNA +F+ AL
Sbjct: 349 LFNEAVGLTGISLTKLDGTAKGGVIFAIADQFKLPIRYIGVGEKIEDLREFNAKEFIEAL 408
Query: 299 L 299
Sbjct: 409 F 409
>sp|A9CHH2|FTSY_AGRT5 Signal recognition particle receptor FtsY OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=ftsY PE=3 SV=1
Length = 478
Score = 239 bits (609), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 186/303 (61%), Gaps = 6/303 (1%)
Query: 1 MKINWITRLKESLSKTACNL----KSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLN 56
+K+ W RL+ L++T+ L +L +K+D++ +ELE L+++D+G ET +
Sbjct: 174 VKLTWFQRLRAGLARTSSQLTTQISALFTKRKLDEDTLDELEDLLIQSDLGVETAMRITG 233
Query: 57 ELKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFK-KCKPFVIMIVGVNGVGKTTT 115
L Y K + + E V ++ + +LK + KPL KP VI++VGVNG GKTTT
Sbjct: 234 ALSSERYGKDV-SGEDVARIMAGEITKVLKPVAKPLELDLSHKPHVILVVGVNGTGKTTT 292
Query: 116 IGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAIN 175
IGKLA V+LAA DTFRAAA EQL I I K D A +A++A
Sbjct: 293 IGKLAAKLSGSGLKVMLAAGDTFRAAAIEQLKIWADRTGSEFIGTKLGADAAGLAYDAYE 352
Query: 176 IAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLS 235
A+ + +D++I+DT+GRL ++ LM EL+KI +V+ K + P+ + +D TGQN ++
Sbjct: 353 QARAQKSDVLIIDTAGRLQNKTELMAELEKIVRVLGKLDPDAPHTVLQTLDATTGQNAMN 412
Query: 236 QIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFV 295
Q++ F + ++GLI+TKLDGT +GGIL AIA K+ +P+YFIG+GE +EDL+ F A DF
Sbjct: 413 QVEIFRNVAGVSGLIMTKLDGTARGGILVAIAAKHKLPVYFIGVGEGVEDLEPFEAEDFA 472
Query: 296 NAL 298
A+
Sbjct: 473 KAI 475
>sp|Q89B28|FTSY_BUCBP Signal recognition particle receptor FtsY OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=ftsY PE=3 SV=1
Length = 397
Score = 237 bits (604), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 187/271 (69%)
Query: 32 NLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKP 91
+L +++E LL +D+G TT+ L++ L K+ +L N + +L + + +L +E P
Sbjct: 124 SLLDDIEEQLLVSDIGVRTTRELVDSLIKVSTQHELKNLNLIIEILKSKMKKILNKVEGP 183
Query: 92 LIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGK 151
L FVI++VGVNGVGKTT IGKLA +KK+ KSV+LAA DTFRAAA +QL + G+
Sbjct: 184 LNINYKNLFVILVVGVNGVGKTTLIGKLAKNYKKKGKSVILAAGDTFRAAAIDQLKLWGE 243
Query: 152 YNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIE 211
N V VI+ + +DPA++ ++AI IA+ K DI+I+DT+GRL +++LM ELKKIK+VI
Sbjct: 244 INSVSVITREIGSDPASVVYDAIKIAKLKCIDILIIDTAGRLHNKNNLMEELKKIKRVIH 303
Query: 212 KKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYS 271
K + E L++D GQN++ Q+K F + L +TGL+ITKLD T KGG++ +IA+++
Sbjct: 304 KIDSTISQETMLVLDACIGQNSIKQVKIFHESLNVTGLVITKLDSTAKGGVIFSIAQEFL 363
Query: 272 IPLYFIGIGEKIEDLQIFNAVDFVNALLNQN 302
IP+ +I GE ED+Q+FN+ FVNA+L+ N
Sbjct: 364 IPVRYISFGEDFEDIQVFNSNIFVNAILSNN 394
>sp|Q68VX4|FTSY_RICTY Signal recognition particle receptor FtsY OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=ftsY PE=3 SV=1
Length = 303
Score = 224 bits (572), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 185/296 (62%), Gaps = 5/296 (1%)
Query: 8 RLKESLSKTACNLKS----LIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIY 63
+LK+SLSKT+ + + + KK+D+ NELE L+ +D+ ++ + K + +
Sbjct: 7 KLKQSLSKTSNTISTGIDKIFYKKKLDQTTLNELEELLISSDISITVVTHIIEKFKNVKF 66
Query: 64 SKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123
K + +++ V+ + L+ L E P + K +I+I GVNGVGKTTTIGKL+ +
Sbjct: 67 DKTI-DSDTVKEAIAKLIEQQLSKSEIPFTLSENKLNIILICGVNGVGKTTTIGKLSALY 125
Query: 124 KKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTD 183
+ K V +AACDTFRAAA QL + +I+ + DPA++A+ AI + K+N D
Sbjct: 126 SAQGKKVAVAACDTFRAAAINQLSSWVDRANALLITGEVSADPASVAYRAIQESIKQNID 185
Query: 184 IVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKI 243
I+ +DT+GRL +LM EL KI KVI+K P LIID TGQNT +QI+ F+ +
Sbjct: 186 ILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAVTGQNTYNQIEYFNDV 245
Query: 244 LRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALL 299
+TGLIITKLDG+ K G+L +K+++P+YFIGIGE+IEDL+IFN DF +L+
Sbjct: 246 TNLTGLIITKLDGSAKAGVLVGAVQKFNLPIYFIGIGEQIEDLKIFNRHDFSRSLV 301
>sp|Q726P7|FTSY_DESVH Signal recognition particle receptor FtsY OS=Desulfovibrio vulgaris
(strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ftsY
PE=3 SV=1
Length = 488
Score = 224 bits (571), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 182/295 (61%), Gaps = 4/295 (1%)
Query: 6 ITRLKESLSKTACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSK 65
+ R +E + + L L + +ID+ + ELE L+ ADVGFE T L+ L++
Sbjct: 191 LARTREQIGRRIDGL--LASHGRIDEGFWEELEEILIMADVGFEPTTQLIGRLRERARKA 248
Query: 66 KLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKK 125
+ + R +L L + ++ + I P V++++GVNGVGKTTTI KLA +
Sbjct: 249 GTDDPARFRELLREELEVIFRAPRR--IAAVNPPEVVLLIGVNGVGKTTTIAKLAYRAQL 306
Query: 126 RKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIV 185
+ + VL+AA DTFRAAA EQL I K ++ DPAA+A+ A++ A + D++
Sbjct: 307 QGRKVLIAAGDTFRAAAIEQLEIWAKRVGAGFYAKTAGADPAAVAYEAMDKAVSEGYDLL 366
Query: 186 IVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILR 245
+VDT+GRL T+++LM EL KI+KV+ +K P+ L+ID TGQN LSQ K F++
Sbjct: 367 LVDTAGRLHTKANLMEELHKIRKVLGRKHPGAPHRSILVIDATTGQNALSQTKLFNEACG 426
Query: 246 ITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
+ +++TKLDGT KGGI+ A+A ++ IP+ ++G+GEK+ED++ FN DF ALL
Sbjct: 427 VDEIVLTKLDGTAKGGIVVAVAMQFGIPITYVGLGEKMEDMRPFNGSDFAMALLG 481
>sp|O05948|FTSY_RICPR Signal recognition particle receptor FtsY OS=Rickettsia prowazekii
(strain Madrid E) GN=ftsY PE=3 SV=1
Length = 303
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 183/296 (61%), Gaps = 5/296 (1%)
Query: 8 RLKESLSKTA----CNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIY 63
+LK+SLSKT+ + + +K+DK NELE L+ +D+ ++ E K + +
Sbjct: 7 KLKQSLSKTSNTISAGIDKIFYKRKLDKETLNELEELLISSDISISVVTHIIEEFKNVKF 66
Query: 64 SKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123
K + +++ V+ + L+ L E P + K +I++ GVNGVGKTTTIGKL+ +
Sbjct: 67 DKTI-DSDTVKEAIAKLIEQQLSKSEIPFTLSENKLNIILVCGVNGVGKTTTIGKLSALY 125
Query: 124 KKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTD 183
K V +AACDTFRAAA QL + +I+ K DPA++A+ AI + K+N D
Sbjct: 126 SAEGKKVAVAACDTFRAAAINQLSSWVHRANALLITGKASADPASVAYRAIEESIKQNID 185
Query: 184 IVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKI 243
I+ +DT+GRL +LM EL KI KVI+K P LIID TGQNT +QI+ F+ +
Sbjct: 186 ILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAITGQNTYNQIEYFNDV 245
Query: 244 LRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALL 299
+TGLI+TKLDG+ K G+L +K+++P+YFIGIGEKIEDL+IFN DF +L+
Sbjct: 246 TNLTGLIVTKLDGSAKAGVLVGAVQKFNLPVYFIGIGEKIEDLKIFNRHDFSRSLV 301
>sp|Q92GB8|FTSY_RICCN Signal recognition particle receptor FtsY OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=ftsY PE=3 SV=1
Length = 303
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 186/301 (61%), Gaps = 5/301 (1%)
Query: 3 INWITRLKESLSKTACNLKS----LIVNKKIDKNLYNELESDLLKADVGFETTQFLLNEL 58
I+ ++LK+SLSKT+ + + KK+D ELE L+ +D+ ++ E
Sbjct: 2 ISIFSKLKQSLSKTSNKISEGIDKIFYKKKLDAGTLEELEELLISSDMSVLVVTNIIEEF 61
Query: 59 KKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGK 118
KK+ + K++ +++ V+ L L+ L P + K VI++ GVNG GKTTTIGK
Sbjct: 62 KKVKFDKEI-DSDTVKEALAKLIEQQLSKSAIPFTLSENKLNVILVCGVNGAGKTTTIGK 120
Query: 119 LANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQ 178
LA+ + + K V +AACDTFRAAA QL + +I+ ++ DPA++A+ + +
Sbjct: 121 LASMYSAQGKKVAVAACDTFRAAAVNQLSTWADRANALLITGEESADPASVAYRGMEESI 180
Query: 179 KKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIK 238
K+N DI+ +DT+GRL + +LM EL KI KVI+K P L+ID TGQNT +Q++
Sbjct: 181 KQNIDILFIDTAGRLHNKKNLMDELSKIVKVIKKLDENAPTHSVLVIDAITGQNTYNQVE 240
Query: 239 EFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNAL 298
F+ +TGLI+TKLDG+ K G++ + +K+++PLYFIGIGEKIEDL+IFN DF L
Sbjct: 241 HFNDATNLTGLIVTKLDGSAKAGVIVGVVQKFNLPLYFIGIGEKIEDLKIFNQHDFARNL 300
Query: 299 L 299
+
Sbjct: 301 V 301
>sp|Q4UK46|FTSY_RICFE Signal recognition particle receptor FtsY OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=ftsY PE=3 SV=1
Length = 303
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 189/306 (61%), Gaps = 15/306 (4%)
Query: 3 INWITRLKESLSKTACNLKSLIVNKKIDKNLYNE---------LESDLLKADVGFETTQF 53
I+ ++LK+SLSKT+ ++K IDK Y + LE L+ +D+
Sbjct: 2 ISIFSKLKQSLSKTSNK-----ISKGIDKIFYKKKLDTETLEELEELLIASDMSVSVVTN 56
Query: 54 LLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKT 113
++ E KK+ + K++ +++ V+ L L+ L E P + K VI++ GVNG GKT
Sbjct: 57 IIEEFKKVKFDKEI-DSDTVKEALAELIEQQLSKSEIPFTLNENKLNVILVCGVNGAGKT 115
Query: 114 TTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNA 173
TTIGKLA + + K V +AACDTFRAAA QL + +I+ ++ DPA++A+ A
Sbjct: 116 TTIGKLAAMYGMQGKKVAVAACDTFRAAAVNQLSTWVDRANALLITGEESADPASVAYRA 175
Query: 174 INIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNT 233
+ + K+N DI+ +DT+GRL + +LM EL KI KVI+K P L+ID TGQNT
Sbjct: 176 MEESIKQNIDILFIDTAGRLHNKKNLMDELSKIVKVIKKLDENAPTHSVLVIDAITGQNT 235
Query: 234 LSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVD 293
+Q++ F+ +TGLI+TKLDG+ K G+L + +K+++P+YFIGIGEKIEDL+IFN D
Sbjct: 236 YNQVEHFNDATNLTGLIVTKLDGSAKAGVLVGVVQKFNLPVYFIGIGEKIEDLKIFNRHD 295
Query: 294 FVNALL 299
F +L+
Sbjct: 296 FAKSLV 301
>sp|Q1RKK5|FTSY_RICBR Signal recognition particle receptor FtsY OS=Rickettsia bellii
(strain RML369-C) GN=ftsY PE=3 SV=1
Length = 303
Score = 212 bits (540), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 186/302 (61%), Gaps = 5/302 (1%)
Query: 3 INWITRLKESLSKTA----CNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNEL 58
I+ ++LK+ LSKT+ + + KK+D ELE L+ D+G ++ +
Sbjct: 2 ISIFSKLKQGLSKTSGKISAGIDKIFYKKKLDAETLEELEELLISTDMGSLVAAKIIEDF 61
Query: 59 KKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGK 118
K + + K++ TE ++ L NL+ L E P + K V+++ GVNG GKTTTIGK
Sbjct: 62 KSLKFDKEVETTE-IKETLANLIEQQLLESEIPFTLNENKLNVVLVCGVNGAGKTTTIGK 120
Query: 119 LANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQ 178
LA + + K V +AACDTFRAAA QL +I+ ++ DPA++A+ A+ +
Sbjct: 121 LAAMYGMQGKKVAVAACDTFRAAAVNQLDSWVTRAKALLITGEEAADPASVAYRAVEESI 180
Query: 179 KKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIK 238
K++ DI+ +DT+GRL + +LM EL KI KVI+K LP L+ID TGQNT +Q++
Sbjct: 181 KQDIDILFIDTAGRLHNKKNLMDELTKIVKVIKKVDENLPTHSVLVIDAITGQNTYNQVE 240
Query: 239 EFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNAL 298
F+ +TGLI+TKLDG+ K G++ + +++++P+YFIGIGE+IEDL+IFN DF +L
Sbjct: 241 HFNDATNLTGLIVTKLDGSAKAGVIVGVVQRFNLPIYFIGIGEQIEDLKIFNRHDFAKSL 300
Query: 299 LN 300
+
Sbjct: 301 VG 302
>sp|Q9RS67|FTSY_DEIRA Signal recognition particle receptor FtsY OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=ftsY PE=3 SV=1
Length = 317
Score = 210 bits (535), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 187/315 (59%), Gaps = 21/315 (6%)
Query: 3 INWITRLKESLSKTACNLKSLIVNKKIDKNLY---------NELESDLLKADVGFETTQF 53
++W RL++ LSKT + +D+ + +LE L+ ADVG T+
Sbjct: 1 MSWFDRLRQGLSKTRQQISG--TAGPLDQEVQTAFTRIDNIEDLEYALIAADVGRAATEE 58
Query: 54 LLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFK------KCKP--FVIMIV 105
++ +++K + +R + L N ++ + L F K P V+M++
Sbjct: 59 IIEDIRK--NGEGRLQDALMRALTLQLEPNARRAQFRELGFSPDVSRSKVDPKGHVVMVI 116
Query: 106 GVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITD 165
GVNGVGKTTTI KL Y+ +R +SV+ AA DTFRAAA QL + G+ VPVI D
Sbjct: 117 GVNGVGKTTTIAKLGQYYMERGQSVMFAAGDTFRAAAGTQLGVWGERLGVPVIQGVDGGD 176
Query: 166 PAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLII 225
PAA+AF+A + + TD++ VDT+GRL + +LM ELKK+++VI+K P E++L++
Sbjct: 177 PAAVAFDAAGARKARGTDLLFVDTAGRLHNKHNLMEELKKVRRVIDKADPGEPAEVWLVL 236
Query: 226 DGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIED 285
D TGQN L Q K+F + +TG+++TKLDGT KGGIL I ++ +P+ FIG+GE+ D
Sbjct: 237 DAVTGQNGLQQAKKFHEATPLTGVVVTKLDGTAKGGILVPIVRELGVPIKFIGVGEQPGD 296
Query: 286 LQIFNAVDFVNALLN 300
LQ F++ +FV AL +
Sbjct: 297 LQPFDSQEFVRALFD 311
>sp|Q8CWX8|FTSY_STRMU Signal recognition particle receptor FtsY OS=Streptococcus mutans
serotype c (strain ATCC 700610 / UA159) GN=ftsY PE=3
SV=1
Length = 498
Score = 210 bits (535), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 114/264 (43%), Positives = 170/264 (64%), Gaps = 8/264 (3%)
Query: 41 LLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPF 100
L+ +DVG + L +L+ +K E +R V+ LV++ +K F + F
Sbjct: 234 LILSDVGVQVASTLTEDLRYEAKLEKAKKPEALRRVIIEKLVDIY---DKDGQFNEKINF 290
Query: 101 -----VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDV 155
V++ VGVNGVGKTT+IGKLA +K + K V+L A DTFRA A QL G+ DV
Sbjct: 291 QNDLTVMLFVGVNGVGKTTSIGKLAYKYKHQGKKVMLVAADTFRAGAVAQLAEWGRRVDV 350
Query: 156 PVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIF 215
PV++ K DPA++ ++ + A + DI+++DT+GRL + +LM EL+KI +V+++ I
Sbjct: 351 PVVTGPKNADPASVVYDGVERAVAADVDILMIDTAGRLQNKDNLMAELEKIGRVVKRVIP 410
Query: 216 ELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLY 275
+ P+E L +D +TGQN L Q KEFSKI +TGLI+TK+DGT KGG++ AI ++ +IP+
Sbjct: 411 DAPHETLLTLDASTGQNALVQAKEFSKITPLTGLILTKIDGTAKGGVVLAIRQELAIPVK 470
Query: 276 FIGIGEKIEDLQIFNAVDFVNALL 299
FIG GEKI+D+ F++ DF+ LL
Sbjct: 471 FIGFGEKIDDIGEFHSEDFMRGLL 494
>sp|P73930|FTSY_SYNY3 Signal recognition particle receptor FtsY OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsY PE=3 SV=1
Length = 504
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 200/312 (64%), Gaps = 17/312 (5%)
Query: 2 KINWITRLKESLSKTACNL----KSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNE 57
+I+W+ +L++ LSKT NL KS++ +++ E+E+ LL+ADVG E T +++
Sbjct: 196 EIDWLRKLRQGLSKTRVNLVNQLKSIVGQGPLNEAAVEEIEAILLQADVGVEATDYIITT 255
Query: 58 LKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPF--------VIMIVGVNG 109
L+ + + L EQ L +L ++L ++PL+ F V ++ GVNG
Sbjct: 256 LQDKLREEAL-PPEQAIEFLKEILRSIL---DRPLLSLPSAEFAPEAEGLNVWLLTGVNG 311
Query: 110 VGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEK-KITDPAA 168
GKTTTIGKLA K+ ++AA DTFRAAA EQ+ + G+ + VPVI+ + TDPAA
Sbjct: 312 AGKTTTIGKLAFMAKQSGYDCVIAAADTFRAAAVEQVKVWGERSGVPVIANPGQNTDPAA 371
Query: 169 IAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGN 228
+ ++ I+ AQ +N ++++VDT+GRL + +LM EL KI+++I+KK E L++D
Sbjct: 372 VVYDGISAAQSRNVNLLLVDTAGRLQNKKNLMDELAKIRRIIDKKAPNATVESLLVLDAT 431
Query: 229 TGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQI 288
GQN L Q + F++ +++G+++TKLDG+ KGG+ A+A++ ++P+ FIG GE IEDL+
Sbjct: 432 LGQNGLRQAEVFAEAAKLSGVVLTKLDGSAKGGVALAVAQQLNLPIRFIGAGEGIEDLRP 491
Query: 289 FNAVDFVNALLN 300
F++ +FV ALLN
Sbjct: 492 FSSYEFVEALLN 503
>sp|O67066|FTSY_AQUAE Signal recognition particle receptor FtsY OS=Aquifex aeolicus
(strain VF5) GN=ftsY PE=3 SV=1
Length = 461
Score = 205 bits (521), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 188/297 (63%), Gaps = 2/297 (0%)
Query: 6 ITRLKESLSKT--ACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIY 63
+ +L+ L KT A L +K+D+ + ELE L+KADVG +T L +L+K
Sbjct: 165 LDKLRRGLQKTKEAVEFGVLFRGRKVDEEFFEELEEMLVKADVGVKTAVELTEKLRKEAI 224
Query: 64 SKKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123
K + E+++ +L L LLK+ + L + V++ VGVNG GKTTTIGKLA+
Sbjct: 225 RKNIKEGEKIKELLKKELKELLKNCQGELKIPEKVGAVLLFVGVNGSGKTTTIGKLAHQL 284
Query: 124 KKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTD 183
K++ K VLL A DTFRAAA EQL + K V ++ +++ +DP A+ + + A+++ +
Sbjct: 285 KQKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDIVKKEEGSDPGAVVYEGMKKAKEEGYE 344
Query: 184 IVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKI 243
+V+VDT+GRL T+ L+ EL+KIKKVI+K E P E L+ID TGQN + Q K F +
Sbjct: 345 VVLVDTAGRLHTKEPLINELRKIKKVIQKFDKEEPSETLLVIDATTGQNAIQQAKVFKEA 404
Query: 244 LRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
+ ITG+++TKLDG+ KGG + AI ++ IP+ +G+GE I+DLQ F+A +V ALL
Sbjct: 405 VDITGIVVTKLDGSAKGGAVVAICRELKIPIKLVGVGEGIDDLQPFDADAYVEALLE 461
>sp|O80842|CFTSY_ARATH Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis
thaliana GN=CPFTSY PE=1 SV=2
Length = 366
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 169/274 (61%), Gaps = 7/274 (2%)
Query: 32 NLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLL----KS 87
+ +ELE LL +D G + T ++ L++ I S KL + ++++ L ++ +L
Sbjct: 95 RVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKSGSEIKDALKESVLEMLAKKNSK 154
Query: 88 LEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLL 147
E L F+K P VIMIVGVNG GKTT++GKLA+ K VL+AA DTFRAAA +QL
Sbjct: 155 TELQLGFRK--PAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLE 212
Query: 148 ILGKYNDVP-VISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKI 206
I + V++E A + A+ +++ D+V+ DTSGRL T LM EL
Sbjct: 213 IWAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIAC 272
Query: 207 KKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAI 266
KK + K + P EI L++DGNTG N L Q +EF++++ ITGLI+TKLDG+ +GG + ++
Sbjct: 273 KKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSV 332
Query: 267 AKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
++ IP+ FIG+GE +EDLQ F+ FVNA+ +
Sbjct: 333 VEELGIPVKFIGVGEAVEDLQPFDPEAFVNAIFS 366
>sp|Q8G736|FTSY_BIFLO Signal recognition particle receptor FtsY OS=Bifidobacterium longum
(strain NCC 2705) GN=ftsY PE=3 SV=1
Length = 420
Score = 194 bits (493), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 186/307 (60%), Gaps = 19/307 (6%)
Query: 6 ITRLKESLSKTACNLKSLIVNKKIDKNL----YNELESDLLKADVGFETTQFLLNELKKI 61
+TRLK L+K+ + + NL + ++E LL ADVG + + L+++L+
Sbjct: 119 LTRLKAKLAKSGNPFGKALFDILAKDNLSEADWEDVEDTLLLADVGADASAQLVDDLRTD 178
Query: 62 IYSKKLFNTEQVRNVLHNLLVNLLK-------SLEKPLIFKKCKPFVIMIVGVNGVGKTT 114
+ +VR L L++L+ + EKP KP VI++VGVNG GKTT
Sbjct: 179 ARITGKADPAEVRATLKEKLLDLVGRDTDRRLNAEKP---GAAKPSVIIMVGVNGTGKTT 235
Query: 115 TIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVI-SEKKITDPAAIAFNA 173
T GKLA F K V++ A DTFRAAA +QL G +VPV+ S+K DPA++AF A
Sbjct: 236 TAGKLARLFVAENKQVMMGAADTFRAAAADQLETWGARVNVPVVRSDKDGADPASVAFEA 295
Query: 174 INIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPY-EIFLIIDGNTGQN 232
A++ N D++I+DT+GRL +S+LM EL KI++V EK LP E+ L++D TGQN
Sbjct: 296 SAKAKEANADVLIIDTAGRLQNKSNLMDELGKIRRVTEKN---LPVDEVLLVLDATTGQN 352
Query: 233 TLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAV 292
++Q K F++ + ITG++++KLDG+ KGGI+ ++ K+ +P+ +G+GE +DL F+
Sbjct: 353 GMAQAKVFAEAIGITGVVLSKLDGSAKGGIVVSVQKELGVPVKLVGLGEGPDDLAPFDPE 412
Query: 293 DFVNALL 299
FV+ +L
Sbjct: 413 GFVDGIL 419
>sp|D3UJA7|FTSY_HELM1 Signal recognition particle receptor FtsY OS=Helicobacter mustelae
(strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198)
GN=ftsY PE=3 SV=1
Length = 292
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 172/296 (58%), Gaps = 26/296 (8%)
Query: 15 KTACNLKSLI---VNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTE 71
KTA N+ + + ++I+K L LE L++ADV +E + LL L + I
Sbjct: 7 KTAQNISNFLGGGAKQQIEKEL---LEEVLIEADVDYEVIEQLLQHLPQNI--------- 54
Query: 72 QVRNVLHNLLVNLLKSLEKPLIFKK-------CKPFVIMIVGVNGVGKTTTIGKLANYFK 124
RN L V L + + K KP V +I+GVNG GKTTTI KLA +K
Sbjct: 55 -TRNQLE---VGLDRFFRGESYYDKVSLKDIPTKPLVELIIGVNGAGKTTTIAKLAKRYK 110
Query: 125 KRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDI 184
K VLL A DTFRAAA +QL + + V +IS + +DP+A+A++ IN + D
Sbjct: 111 DSGKKVLLGAGDTFRAAAIDQLKLWSEKISVDIISTQYGSDPSALAYDTINAGSARKMDH 170
Query: 185 VIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKIL 244
+I+DT+GRL Q++L EL KI +V K + PY LI+DG G ++++Q K F ++L
Sbjct: 171 IIIDTAGRLHNQTNLKNELLKITRVCSKALNNEPYRKILILDGTQGSSSINQAKIFHEML 230
Query: 245 RITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
++ G+I+TKLDGT+KGG + +I +P+ IG+GE+ EDL F+ DF+N LL+
Sbjct: 231 KVDGVILTKLDGTSKGGAILSIIHALKLPIIAIGVGERAEDLLDFDQKDFINKLLD 286
>sp|P83749|FTSY_THEAQ Signal recognition particle receptor FtsY OS=Thermus aquaticus
GN=ftsY PE=1 SV=2
Length = 304
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 181/308 (58%), Gaps = 15/308 (4%)
Query: 3 INWITRLKESLSKTACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNE----- 57
+ + RLK L+KT L I + + ELE LL ADVG T+ +L E
Sbjct: 1 MGFFDRLKAGLAKTRERLLKAIPWGGNLEEVLEELEMALLAADVGLSATEEILQEVRASG 60
Query: 58 ---LKKIIYSK--KLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGK 112
LK+ + K + ++ R L L N K KP+ + K V+++VGVNGVGK
Sbjct: 61 RKDLKEAVKEKLVGMLEPDERRATLRKLGFNPQKP--KPV---EPKGRVVLVVGVNGVGK 115
Query: 113 TTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFN 172
TTTI KL Y++ K V+ A DTFRAA QL GK +PVI + TDPAA+A++
Sbjct: 116 TTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYD 175
Query: 173 AINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQN 232
A+ + + D++ VDT+GRL T+ +LM ELKK+K+ I K E P E++L++D TGQN
Sbjct: 176 AVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQN 235
Query: 233 TLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAV 292
L Q K+F + + +TG+I+TKLDGT KGG+L I + +P+ F+G+GE +DLQ F+
Sbjct: 236 GLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPE 295
Query: 293 DFVNALLN 300
FV ALL
Sbjct: 296 AFVEALLE 303
>sp|O33010|FTSY_MYCLE Signal recognition particle receptor FtsY OS=Mycobacterium leprae
(strain TN) GN=ftsY PE=3 SV=1
Length = 430
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 182/302 (60%), Gaps = 9/302 (2%)
Query: 6 ITRLKESLSKT----ACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKI 61
+ RL+ L++T ++ LIV +D++ + ELE LL AD+G T+ +++ L+
Sbjct: 131 LDRLRGRLARTQNAFGRSILGLIVGGDLDEDSWQELEDTLLVADLGPVATESVMSALRSR 190
Query: 62 IYSKKLFNTEQVRNVLHNLLVNLLKS-LEKPL--IFKKCKPFVIMIVGVNGVGKTTTIGK 118
+ + + R +L ++L++ L+ +++ + + P V++IVGVNG GKTTT+GK
Sbjct: 191 LLNSNVHTESDARTMLRDVLISELQPDMDRSIRALPHADHPAVLLIVGVNGTGKTTTVGK 250
Query: 119 LANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQ 178
LA + V+L A DTFRAAA +QL ++ + DPA++AF+A++
Sbjct: 251 LARVLVADGRRVVLGAADTFRAAAADQLQTWASRVGAELVRGVEGADPASVAFDAVDKGI 310
Query: 179 KKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIK 238
D+V++DT+GRL T+ LM EL KIK+V+ ++ E+ L++D GQN L+Q++
Sbjct: 311 GAGADVVVIDTAGRLHTKVGLMDELDKIKRVVTRRAAV--DEVLLVLDATIGQNGLTQVR 368
Query: 239 EFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNAL 298
F++++ ITG ++TKLDGT KGGI+ I ++ +P+ +G+GE +DL F FV+AL
Sbjct: 369 VFAEVVDITGAVLTKLDGTAKGGIVFRIQRELGVPVKLVGLGEGPDDLAPFEPAVFVDAL 428
Query: 299 LN 300
L
Sbjct: 429 LE 430
>sp|Q9Z6T7|FTSY_CHLPN Signal recognition particle receptor FtsY OS=Chlamydia pneumoniae
GN=ftsY PE=3 SV=1
Length = 290
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 6/283 (2%)
Query: 20 LKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHN 79
L+SL K I +L + ES +AD G E T+ L L++ K + +++++
Sbjct: 9 LQSLF-KKNISLDLIEDAESLFYEADFGTELTEELCARLRRT----KKADASTIKDLITV 63
Query: 80 LLVNLLKSL-EKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138
LL L+ L + + +P V +++G NG GKTTT KLA+Y+K+R +SV+L A DTF
Sbjct: 64 LLRESLEGLPSQASQSSQTRPIVSLLLGTNGSGKTTTAAKLAHYYKERSESVMLVATDTF 123
Query: 139 RAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSH 198
RAA +Q + +S + D AAIAF+ I A + VI+DTSGRL +
Sbjct: 124 RAAGMDQARLWANELGCGFVSGQPGGDAAAIAFDGIQSAIARGYSRVIIDTSGRLHVHGN 183
Query: 199 LMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTT 258
LM+EL KI V K + P+EIF+ +D G N + Q++ F ++ ++GLI TK+DG+
Sbjct: 184 LMKELSKIVSVCGKALEGAPHEIFMTVDSTLGNNAIEQVRVFHDVVPLSGLIFTKVDGSA 243
Query: 259 KGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLNQ 301
KGG L IAK+ IP FIG GE ++DL F+ F+N L +
Sbjct: 244 KGGTLFQIAKRLKIPTKFIGYGESLKDLNEFDLDLFLNKLFPE 286
>sp|Q6MTB9|FTSY_MYCMS Signal recognition particle receptor FtsY OS=Mycoplasma mycoides
subsp. mycoides SC (strain PG1) GN=ftsY PE=1 SV=1
Length = 400
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 173/273 (63%), Gaps = 11/273 (4%)
Query: 27 KKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLV---- 82
K+ D + ELE L++ D+G + + N ++K +K+ + E +++ L L
Sbjct: 110 KQADDEFFEELEDVLIQTDMGMKMVLKVSNLVRK--KTKRDTSFENIKDALVESLYQAYT 167
Query: 83 -NLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAA 141
N + + + FK+ + + M+VGVNG GKTT++ K+ANY+ + VL+AA DTFRA
Sbjct: 168 DNDWTNKKYRIDFKENRLNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRAG 227
Query: 142 AYEQLLILGKY---NDVPVISEKKI-TDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQS 197
A +QL K N V ++ K+ DPA++ F+AI A+++N D++++DT+GRL +
Sbjct: 228 ATQQLEEWIKTRLNNKVDLVKANKLNADPASVVFDAIKKAKEQNYDLLLIDTAGRLQNKV 287
Query: 198 HLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGT 257
+LM EL+K+ K+I++ P+E+ L+ID TGQN + Q +EFSK+ ++G+I+TK+D T
Sbjct: 288 NLMAELEKMNKIIQQVEKSAPHEVLLVIDATTGQNGVIQAEEFSKVADVSGIILTKMDST 347
Query: 258 TKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFN 290
+KGGI AI + +IP+ IG+GEK++DL F+
Sbjct: 348 SKGGIGLAIKELLNIPIKMIGVGEKVDDLLAFD 380
>sp|O32861|FTSY_MYCHP Signal recognition particle receptor FtsY OS=Mycoplasma hominis
(strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21)
GN=ftsY PE=3 SV=1
Length = 351
Score = 181 bits (459), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 165/263 (62%), Gaps = 6/263 (2%)
Query: 41 LLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKS---LEKPLIFKKC 97
L+ +D+ + Q ++NE KK + ++ + + + + ++ + L + S ++ L K
Sbjct: 84 LIMSDISIKLVQIIINECKKEVRNENITDPKLINEIIADKLFTIYTSNSVVDTTLNIKDN 143
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKY--NDV 155
+ VI++VGVNG GKTT+I K+A K VL+AA DTFRAAA EQL I K D+
Sbjct: 144 RLNVILVVGVNGSGKTTSISKIAKKLIDEGKKVLIAAGDTFRAAAVEQLEIWAKRVGADI 203
Query: 156 PVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIF 215
+E ++ DPAA+ + AI+IA+ K DI+IVDT+GRL + +LM EL KI +V+ KI
Sbjct: 204 VTPNENEV-DPAAVVYRAIDIAKSKKYDILIVDTAGRLQNKVNLMNELAKINRVLASKIP 262
Query: 216 ELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLY 275
+ P+E L++D TGQN + Q + F + +TG+I+TK+DGT+KGGI+ I + + +
Sbjct: 263 DAPHESLLVLDATTGQNGVIQARVFKESTPLTGIILTKMDGTSKGGIVLTIKDEIGLFVK 322
Query: 276 FIGIGEKIEDLQIFNAVDFVNAL 298
+IG+GEK++DL F+ ++ L
Sbjct: 323 YIGLGEKVDDLAEFDLDSYIYGL 345
>sp|O25458|FTSY_HELPY Signal recognition particle receptor FtsY OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ftsY PE=3 SV=1
Length = 293
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 160/273 (58%), Gaps = 20/273 (7%)
Query: 35 NELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIF 94
ELE L+ D+ ++ + LL L +I K+L V LL+ + +
Sbjct: 28 EELEEILIGFDIQYDLIESLLKHLGDLITPKQL-------------EVALLRFVRGDSYY 74
Query: 95 KKC-------KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLL 147
K KP V +IVGVNG GKTTTI KLA K+ K LL A DTFRAAA +QL
Sbjct: 75 DKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQ 134
Query: 148 ILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIK 207
+ G+ ++ VIS K+ +DP+++A+N I A KN D V +DT+GRL Q++L EL KI
Sbjct: 135 LWGEKLNIQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIA 194
Query: 208 KVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIA 267
+ K + + P+ FLI+DG G + L+Q K F + L + G+I+TKLDGT+KGG + ++
Sbjct: 195 RTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVL 254
Query: 268 KKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
+ +P+ ++G+GEK +DL F+ F+ L++
Sbjct: 255 YELKLPILYLGMGEKEDDLIAFDEERFIEDLVD 287
>sp|Q9ZL80|FTSY_HELPJ Signal recognition particle receptor FtsY OS=Helicobacter pylori
(strain J99) GN=ftsY PE=3 SV=1
Length = 293
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 159/273 (58%), Gaps = 20/273 (7%)
Query: 35 NELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIF 94
ELE L+ D+ ++ + LL L +I K+L V LL+ + +
Sbjct: 28 EELEEILIGFDIQYDLIESLLKHLGDLITPKQL-------------EVALLRFVRGESYY 74
Query: 95 KKC-------KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLL 147
K KP V +IVGVNG GKTTTI KLA K+ K LL A DTFRAAA +QL
Sbjct: 75 DKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQ 134
Query: 148 ILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIK 207
+ G+ +V VIS K+ +DP+++A+N I A KN D V +DT+GRL Q++L EL KI
Sbjct: 135 LWGEKLNVQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIA 194
Query: 208 KVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIA 267
K + + P+ FLI+DG G + L+Q K F + L + G+I+TKLDGT+KGG + ++
Sbjct: 195 HTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVL 254
Query: 268 KKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
+ +P+ ++G+GEK +DL F+ F+ L++
Sbjct: 255 YELKLPILYLGMGEKEDDLIAFDEERFIEDLVD 287
>sp|P66842|FTSY_MYCTU Signal recognition particle receptor FtsY OS=Mycobacterium
tuberculosis GN=ftsY PE=3 SV=1
Length = 422
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 167/274 (60%), Gaps = 5/274 (1%)
Query: 30 DKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLK-SL 88
D++ + ++E LL AD+G T ++++L+ + S + R VL ++L+N L+ +
Sbjct: 151 DEDSWQDVEDTLLVADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGM 210
Query: 89 EKPL--IFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQL 146
++ + + P V+++VGVNG GKTTT+GKLA + V+L A DTFRAAA +QL
Sbjct: 211 DRSIRALPHAGHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQL 270
Query: 147 LILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKI 206
V+ + DPA++AF+A++ D+V++DT+GRL T+ LM EL K+
Sbjct: 271 QTWAARVGAAVVRGPEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKV 330
Query: 207 KKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAI 266
K+V+ ++ E+ L++D GQN L+Q + F++++ I+G ++TKLDGT KGGI+ +
Sbjct: 331 KRVVTRRASV--DEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRV 388
Query: 267 AKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
++ +P+ +G+GE +DL F FV+ALL
Sbjct: 389 QQELGVPVKLVGLGEGPDDLAPFEPAAFVDALLG 422
>sp|P66843|FTSY_MYCBO Signal recognition particle receptor FtsY OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ftsY PE=3 SV=1
Length = 422
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 167/274 (60%), Gaps = 5/274 (1%)
Query: 30 DKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLK-SL 88
D++ + ++E LL AD+G T ++++L+ + S + R VL ++L+N L+ +
Sbjct: 151 DEDSWQDVEDTLLVADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGM 210
Query: 89 EKPL--IFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQL 146
++ + + P V+++VGVNG GKTTT+GKLA + V+L A DTFRAAA +QL
Sbjct: 211 DRSIRALPHAGHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQL 270
Query: 147 LILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKI 206
V+ + DPA++AF+A++ D+V++DT+GRL T+ LM EL K+
Sbjct: 271 QTWAARVGAAVVRGPEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKV 330
Query: 207 KKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAI 266
K+V+ ++ E+ L++D GQN L+Q + F++++ I+G ++TKLDGT KGGI+ +
Sbjct: 331 KRVVTRRASV--DEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRV 388
Query: 267 AKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
++ +P+ +G+GE +DL F FV+ALL
Sbjct: 389 QQELGVPVKLVGLGEGPDDLAPFEPAAFVDALLG 422
>sp|Q9HJ93|FTSY_THEAC Signal recognition particle receptor FtsY OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=ftsY PE=3 SV=1
Length = 288
Score = 171 bits (434), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 169/277 (61%), Gaps = 12/277 (4%)
Query: 27 KKIDKN-LYNELESDLLKADVGFETTQFLLNELKKIIYSK-KLFNTEQVRNVLHNLLVNL 84
KKID + + +E+ L++ADV E + +L ++ +K K T VL + ++ +
Sbjct: 16 KKIDPDEVADEIPLKLVEADVSLEAAE----DLASLVRNKLKEDTTLDPNEVLSSSILEM 71
Query: 85 LKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYE 144
+ + ++ KPFV++ +G+NG GKTTTIGK A+Y K+ KSV++AA DTFRA A E
Sbjct: 72 MPEYKFDVLNVNKKPFVVLFLGINGTGKTTTIGKFAHYLKRNGKSVVIAAADTFRAGAIE 131
Query: 145 QLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELK 204
Q+ ++G+ VI + +DP+++AF+AI A+ +N D V++DT+GR++T +L+ E+K
Sbjct: 132 QISLIGREAGTEVIRHDRGSDPSSVAFDAIEHARARNIDYVLIDTAGRMNTNKNLLDEMK 191
Query: 205 KIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILA 264
KIK+V + P L+ID +GQ++++Q + F + + G+I+TKLD +GG +
Sbjct: 192 KIKRVSK------PDLTLLVIDAVSGQDSVNQARMFEENVGYDGVIVTKLDTDARGGSIL 245
Query: 265 AIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLNQ 301
+I P+ F+ G+ ++D+ F+ +V L+ +
Sbjct: 246 SIYHDLKKPVLFVCTGQGLDDIMPFDRNWYVRKLIPE 282
>sp|P27414|FTSY_SULAC Signal recognition particle receptor FtsY OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=ftsY PE=3 SV=1
Length = 369
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 159/278 (57%), Gaps = 15/278 (5%)
Query: 32 NLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLL----VNLLKS 87
++ EL LL +DV +E T+ +L +LK + KK+ E+V ++ N L +L
Sbjct: 97 DVIEELRFQLLDSDVSYEVTEKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEILTK 156
Query: 88 LEKPLIFKKC-----KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAA 142
+K + +K KPFVI+ GVNGVGKTTTI K+ N KK S ++AA DTFRAAA
Sbjct: 157 NQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTFRAAA 216
Query: 143 YEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRE 202
EQL +V +I K DPA++AF+AI+ A+ +N D+V++DT+GR+ S L+ E
Sbjct: 217 QEQLAYHASKLEVQLIRGKYGADPASVAFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEE 276
Query: 203 LKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGI 262
LK++ ++ + P LI+D G + L Q + F + +I+TK+D KGGI
Sbjct: 277 LKRVLRIAK------PDFRILILDSLAGSDALEQARHFENNVGYDAVILTKVDADAKGGI 330
Query: 263 LAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
++A + P+ ++G+G+ +DL F+ FV + +
Sbjct: 331 ALSLAYELKKPVVYMGVGQNYDDLIPFSPDWFVERIFS 368
>sp|Q55311|SRP54_SYNE7 Signal recognition particle protein OS=Synechococcus elongatus
(strain PCC 7942) GN=ffh PE=3 SV=1
Length = 485
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 147/269 (54%), Gaps = 10/269 (3%)
Query: 36 ELESDLLKADVGFETTQFLLNELKKIIYSKKLFN----TEQVRNVLHNLLVNLLKSLEKP 91
E+ LL+ADV + + ++++ ++ + +Q V+++ LV ++ P
Sbjct: 33 EVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFIKVVYDELVQVMGETHVP 92
Query: 92 LIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGK 151
L P VI++ G+ G GKTT KLA + +K +S LL A D +R AA +QL+ LGK
Sbjct: 93 LAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAIDQLITLGK 152
Query: 152 YNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIE 211
DVPV +P IA + A+++ D VIVDT+GRL + +M EL ++K+ I
Sbjct: 153 QIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMMEELAQVKEAI- 211
Query: 212 KKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYS 271
P+E+ L++D GQ S + F + + ITG I+TKLDG ++GG +I +
Sbjct: 212 -----APHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVSG 266
Query: 272 IPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
P+ F+G+GEK+E LQ F+ + +L
Sbjct: 267 QPIKFVGLGEKVEALQPFHPERMASRILG 295
>sp|O15821|SRP54_ENTHI Signal recognition particle 54 kDa protein OS=Entamoeba histolytica
PE=3 SV=1
Length = 487
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 156/284 (54%), Gaps = 12/284 (4%)
Query: 22 SLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNL- 80
S +V++++ L E+E+ LL DV + ++N +KK I S+ + + R ++ +
Sbjct: 20 STVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKINSEDIPDGIDKRKLIKDSV 79
Query: 81 ---LVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDT 137
L+NL+ + KK K V+M+VG+ G GKTTTI KLA Y+K R + DT
Sbjct: 80 FEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITKLALYYKNRGYKPAVVGADT 139
Query: 138 FRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQS 197
FRA AYEQL + K VP K+ +DP +A + +K+ DI++VDTSGR
Sbjct: 140 FRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFRKEKNDIILVDTSGRHKQDK 199
Query: 198 HLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDG- 256
L +E++ ++ I+ P I ++DG GQ Q K F + + +IITKLDG
Sbjct: 200 ELFKEMQSVRDAIK------PDSIIFVMDGAIGQAAFGQAKAFKDAVEVGSVIITKLDGH 253
Query: 257 TTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
+ GG L+A+A S P+ FIG GEK+ +++ F+A FV LL
Sbjct: 254 SNGGGALSAVAATKS-PIIFIGTGEKVNEIEEFDAESFVRQLLG 296
>sp|P37105|SRP54_BACSU Signal recognition particle protein OS=Bacillus subtilis (strain
168) GN=ffh PE=1 SV=1
Length = 446
Score = 165 bits (417), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 167/298 (56%), Gaps = 14/298 (4%)
Query: 8 RLKESLSKTACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYS--- 64
RL++++SK K V+++ K + E+ LL+ADV F+ + + ++ +
Sbjct: 9 RLQQTISKIRGKGK---VSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVGQDV 65
Query: 65 -KKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123
K L +QV V+ L L+ E + K P VIM+VG+ G GKTTT GKLAN
Sbjct: 66 MKSLTPGQQVIKVVQEELTELMGGEESKIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLL 125
Query: 124 KKRK-KSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNT 182
+K+ + +L A D +R AA +QL LGK D+PV S P IA AI A++++
Sbjct: 126 RKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHY 185
Query: 183 DIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSK 242
D VI+DT+GRL LM EL +K++ P EIFL++D TGQ+ ++ K F++
Sbjct: 186 DYVILDTAGRLHIDHELMDELTNVKEIAN------PEEIFLVVDSMTGQDAVNVAKSFNE 239
Query: 243 ILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
L +TG+++TKLDG T+GG +I + P+ F G+GEK++ L+ F+ + +L
Sbjct: 240 QLGLTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILG 297
>sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic
OS=Arabidopsis thaliana GN=FFC PE=1 SV=1
Length = 564
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 130/219 (59%), Gaps = 6/219 (2%)
Query: 71 EQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130
+Q+ ++H+ LV L+ L F K P VI++ G+ GVGKTT KLA Y KK+ KS
Sbjct: 148 QQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSC 207
Query: 131 LLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTS 190
+L A D +R AA +QL+ILG+ VPV + PA IA + A+K N D+VI+DT+
Sbjct: 208 MLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTA 267
Query: 191 GRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLI 250
GRL +M ELK +KK F P E+ L++D TGQ + + F+ + ITG I
Sbjct: 268 GRLQIDKGMMDELKDVKK------FLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAI 321
Query: 251 ITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIF 289
+TKLDG ++GG ++ + P+ +G GE++EDL+ F
Sbjct: 322 LTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 360
>sp|P74214|SRP54_SYNY3 Signal recognition particle protein OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ffh PE=3 SV=1
Length = 482
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 154/296 (52%), Gaps = 27/296 (9%)
Query: 7 TRLKESLSKTACNLKSLIVNKKIDKNLYNELESDLLKADV--GFETTQFLLNELKKIIYS 64
+ +KE+L + L + VN ++ K ++E L ADV G Q + KI+Y
Sbjct: 25 SNIKEALQEVRRALLAADVNLQVVKGFIKDVEQKALGADVISGVNPGQQFI----KIVYD 80
Query: 65 KKLFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFK 124
+ LVNL+ PL + P VI++ G+ G GKTT KLA Y +
Sbjct: 81 E---------------LVNLMGESNVPLAQAEQAPTVILMAGLQGTGKTTATAKLALYLR 125
Query: 125 KRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDI 184
K+K+S L+ A D +R AA +QL LG+ DVPV +P IA + A++ D
Sbjct: 126 KQKRSALMVATDVYRPAAIDQLKTLGQQIDVPVFDLGSDANPVEIARQGVEKAKELGVDT 185
Query: 185 VIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKIL 244
V++DT+GRL +M EL +IK+V++ P + L++D TGQ + F + +
Sbjct: 186 VLIDTAGRLQIDPQMMAELAEIKQVVK------PDDTLLVVDAMTGQEAANLTHTFHEQI 239
Query: 245 RITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
ITG I+TKLDG T+GG ++ + P+ F+G+GEK+E LQ F + +LN
Sbjct: 240 GITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRLASRILN 295
>sp|O29633|SRP54_ARCFU Signal recognition particle 54 kDa protein OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=srp54 PE=1 SV=1
Length = 433
Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 162/296 (54%), Gaps = 19/296 (6%)
Query: 11 ESLSKTACNLK-SLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFN 69
ESL + A + S ++KK + + E++ L+KADV + + + +KK S+ +
Sbjct: 4 ESLKEVARKIAGSSSIDKKFVEEMVKEIQRALIKADVNVRQVKEISDAIKKRALSEDVLP 63
Query: 70 T----EQVRNVLHN-LLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFK 124
EQ+ +++ LL + + LE PL KK K IM+VG+ G GKTTT K+A YFK
Sbjct: 64 ALNAKEQILKIVYEELLRGVGEGLEIPL--KKAK---IMLVGLQGSGKTTTTAKMAKYFK 118
Query: 125 KRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDI 184
R V + A DT+R AAYEQL L + + EK D I NA+ + K+ D+
Sbjct: 119 DRGMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEKDAVKIVKNALE--KLKDHDM 176
Query: 185 VIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKIL 244
+I+DT+GR + + L+ E+ KI +V P L++D GQ Q + F + +
Sbjct: 177 IIIDTAGRHALEDELIDEMIKIAEVAR------PDYKLLVLDAAIGQLASKQAQAFHEAI 230
Query: 245 RITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
I G+IITK DGT KGG + A++ IP+ FIG GEK+ED + F+ FV+ LL
Sbjct: 231 GINGIIITKFDGTAKGGGALSAARQIGIPIAFIGTGEKVEDFERFDPAGFVSRLLG 286
>sp|P47539|FTSY_MYCGE Signal recognition particle receptor FtsY OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=ftsY PE=3
SV=1
Length = 346
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 159/287 (55%), Gaps = 5/287 (1%)
Query: 12 SLSKTACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTE 71
+ +KT L VN +D+ L L+ DVG+ + + + + I ++ + +
Sbjct: 48 TFAKTINELSKRYVN--VDEQFKENLFEGLVLLDVGYHAANKICDAIIEQIKLNRITDFQ 105
Query: 72 QVRN-VLHNLLVNLLKS--LEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKK 128
++ ++ ++V ++ + LI K V + VGVNGVGKTTT+ K+A++F K+ K
Sbjct: 106 LIKELIIDQIIVYYIQDKLFDTDLIVKPNFTNVYLFVGVNGVGKTTTLAKIADFFIKQNK 165
Query: 129 SVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVD 188
VLL A DTFRA A EQL K + ++ A+ F + D V+ D
Sbjct: 166 RVLLVAGDTFRAGAIEQLNQWAKLLNCDIVLPNPKEQTPAVIFRGVKKGIDDKYDFVLCD 225
Query: 189 TSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITG 248
TSGRL + +LM EL+KI ++I+K P E L++DG GQ LSQ K F++ ++TG
Sbjct: 226 TSGRLQNKLNLMNELQKIYQIIQKVSGSEPSETLLVLDGTVGQTGLSQAKVFNEFSKLTG 285
Query: 249 LIITKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFV 295
+++TK+DG+ KGGI+ AI +++P+ IG GEK DL IF+ +V
Sbjct: 286 IVLTKMDGSAKGGIILAIKDMFNLPVKLIGFGEKTSDLAIFDLEKYV 332
>sp|Q8U070|SRP54_PYRFU Signal recognition particle 54 kDa protein OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=srp54
PE=1 SV=1
Length = 443
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 163/301 (54%), Gaps = 20/301 (6%)
Query: 11 ESLSKTACN-LKSLIVNKKIDKNLYNELESD----LLKADVGFETTQFLLNELKKIIYSK 65
++L K N LK + +D+ L EL D L++ADV L E+++ +
Sbjct: 4 DNLGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRALEE 63
Query: 66 K----LFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLAN 121
K + E + +++ L L + KP+ K+ KP ++++VG+ G GKTTT+ KLA
Sbjct: 64 KPPAGISKKEHIIKIVYEELTKFLGTEAKPIEIKE-KPTILLMVGIQGSGKTTTVAKLAR 122
Query: 122 YFKKRKKSVLLAACDTFRAAAYEQLL-ILGKYNDVPVISEKKITDPAAIAFNAINIAQKK 180
YF+KR V + DT+R AY QL +L +Y+ + V + D +A ++ + K
Sbjct: 123 YFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYH-IEVFGNPQEKDAIKLAKEGVDYFKSK 181
Query: 181 NTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEF 240
DI+IVDT+GR L+ E+K+I VI P+E+ L+IDG GQ +Q F
Sbjct: 182 GVDIIIVDTAGRHKEDKALIEEMKQISNVIH------PHEVILVIDGTIGQQAYNQALAF 235
Query: 241 SKILRITGLIITKLDGTTK-GGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALL 299
+ I +I+TKLDG+ K GG L+A+A P+ FIG GEKI+D++ F+ FV+ LL
Sbjct: 236 KEATPIGSIIVTKLDGSAKGGGALSAVA-ATGAPIKFIGTGEKIDDIEPFDPPRFVSRLL 294
Query: 300 N 300
Sbjct: 295 G 295
>sp|Q2NE47|SRP54_METST Signal recognition particle 54 kDa protein OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=srp54 PE=3 SV=1
Length = 444
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 168/299 (56%), Gaps = 17/299 (5%)
Query: 9 LKESLSKTACNLKSL-IVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYS--- 64
L ESL++T L + I++KK K++ +++ L+++DV + L +++K
Sbjct: 5 LSESLTQTMKKLAGMSIIDKKTLKDVTKDIQRALIQSDVNVKVVFGLTKKIEKRALEEEL 64
Query: 65 -KKLFNTEQVRNVLHNLLVNLLKSLEKPLIFK-KCKPFVIMIVGVNGVGKTTTIGKLANY 122
K L E V +++ LVNL+ EKP K KP+ IM++G+ G GKTTT KL +
Sbjct: 65 PKGLSPKEHVMRIVYQELVNLIG--EKPEELKINRKPYKIMMLGLQGSGKTTTTAKLVKH 122
Query: 123 FKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNT 182
KK+ + + DT+R AAYEQL L + DVPV + + D +A + K
Sbjct: 123 LKKKGHTSAIVCTDTWRPAAYEQLRQLTEPLDVPVFGDPENKDAIDLAKKGLEKCGSK-Y 181
Query: 183 DIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSK 242
D+++VDT+GR + L+ E+ ++ ++++ P E+ L+IDG GQ SQ + F K
Sbjct: 182 DVILVDTAGRHKEEKDLLDEMAELSQIVQ------PDEVILVIDGTIGQQARSQAETFKK 235
Query: 243 ILRITGLIITKLDGTTK-GGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
I +I++KLDG+ K GG L+A+A + P+ FIG GE+++D + F+ F++ LL
Sbjct: 236 TTDIGSIIVSKLDGSAKGGGALSAVA-EIRAPIKFIGTGERVDDFEAFDPERFISRLLG 293
>sp|O07853|SRP54_SULAC Signal recognition particle 54 kDa protein OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=srp54 PE=3 SV=2
Length = 444
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 154/273 (56%), Gaps = 16/273 (5%)
Query: 36 ELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVR----NVLHNLLVNLLKSLEKP 91
EL+ L+KADV + L + +KK I +K + + R +++++ L L ++P
Sbjct: 28 ELQIILIKADVNVRLVKDLTDRIKKRITEEKPPSAIEKREWFISIVYDELSRLFGGDKEP 87
Query: 92 LIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGK 151
+ K P++IM+VGV G GKTTT GKLA ++KK+ V L A D +R AAYEQL+ +G+
Sbjct: 88 EVMPKKLPYIIMLVGVQGSGKTTTSGKLALFYKKKGYKVGLVAADIYRPAAYEQLIQIGQ 147
Query: 152 YNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGR--LSTQSHLMRELKKIKKV 209
++PV E +P IA N + K+ +IVI+DT+GR ++ L+ E+K +
Sbjct: 148 QINIPVYGEPGNKNPIEIATNGLEKFLKEKMNIVIIDTAGRHGYGEEASLLEEMKSMYDK 207
Query: 210 IEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGG--ILAAIA 267
I P E+ L+ID + GQ F + I LI++K+DGT KGG + A IA
Sbjct: 208 IH------PDEVILVIDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGALSAVIA 261
Query: 268 KKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
I FIG GEK+++L++FN FV+ LL
Sbjct: 262 TGAQIK--FIGTGEKLDELEVFNPRRFVSRLLG 292
>sp|A3MWX6|SRP54_PYRCJ Signal recognition particle 54 kDa protein OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=srp54 PE=3 SV=1
Length = 431
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 162/300 (54%), Gaps = 17/300 (5%)
Query: 8 RLKESLSKTACNLKSL-IVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKK 66
+L E SK ++ + +++ + + L E++ LLKADV E + + K I +K
Sbjct: 2 KLSEVFSKLIEKIRGVDYIDEAVLQELSREIQRSLLKADVPLELVKAFTDSAVKRIREEK 61
Query: 67 ----LFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCK-PFVIMIVGVNGVGKTTTIGKLAN 121
+ E + VL+ LV LL E+P FK K P+V++++GV G GKTTT KLA
Sbjct: 62 PPAGIPPREYLVYVLYEELVKLLGG-EQPAEFKPTKKPYVVLLLGVEGSGKTTTAAKLAK 120
Query: 122 YFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKN 181
Y KR V L DT R AA++QL L + VP E+ + IA + KN
Sbjct: 121 YLAKRGYKVGLVETDTIRPAAFDQLKQLAEKIGVPFYGERDGKNAVEIAVRGVQ--NFKN 178
Query: 182 TDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFS 241
D+VI+DT+GR + L++E+K I ++ P E+FL+ID G+ +Q + F
Sbjct: 179 MDVVIIDTAGRHRNEEELLKEVKAIYDAVK------PDEVFLVIDATVGKLAAAQAEAFM 232
Query: 242 KILRITGLIITKLDGTTK-GGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
K L I +IITK+D T + GG LAA+AK + FIG+GE +++ ++FN FV +L
Sbjct: 233 KYLPIHSVIITKMDSTARGGGALAAVAKT-GARVKFIGVGEDVDEFELFNPRKFVARVLG 291
>sp|P49968|SR541_HORVU Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare
GN=SRP54-1 PE=2 SV=1
Length = 497
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 159/301 (52%), Gaps = 13/301 (4%)
Query: 6 ITRLKESLSKTACNLK-SLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYS 64
+ +L S+S+ + + ++++K+ NE+ LL++DV F+ + + ++KI+
Sbjct: 3 LAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIVNL 62
Query: 65 KKLFNTEQVRNVLHNL----LVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLA 120
+ L R ++ L N+L + KK KP V+M VG+ G GKTTT K A
Sbjct: 63 ETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTKYA 122
Query: 121 NYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKK 180
Y +++ L DTFRA A++QL +P +DP IA + +K+
Sbjct: 123 YYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFRKE 182
Query: 181 NTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEF 240
N+D++I+DTSGR ++ L E++++ + + P + ++DG+ GQ Q + F
Sbjct: 183 NSDLIIIDTSGRHKQEAALFEEMRQVAEATK------PDLVIFVMDGSIGQAAFDQAQAF 236
Query: 241 SKILRITGLIITKLDGTTK-GGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALL 299
+ + +IITKLDG K GG L+A+A S P+ FIG GE I++ +IF+ FV+ LL
Sbjct: 237 KQSASVGAVIITKLDGHAKGGGALSAVAATKS-PVIFIGTGEHIDEFEIFDVKPFVSRLL 295
Query: 300 N 300
Sbjct: 296 G 296
>sp|Q9ZK62|SRP54_HELPJ Signal recognition particle protein OS=Helicobacter pylori (strain
J99) GN=ffh PE=3 SV=1
Length = 448
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 156/275 (56%), Gaps = 10/275 (3%)
Query: 27 KKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLK 86
K +D+ L +EL+ LLK DV + + LL +++ + + +Q + L L+ +L
Sbjct: 23 KALDRAL-DELKKTLLKNDVHHKVARELLKKVESQTKAGGI-GKQQFLDALEKSLLEILS 80
Query: 87 SL-EKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQ 145
+ F + P V+++ G+ G GKTTT KLA+Y K + K VLL ACD R AA EQ
Sbjct: 81 AKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKTKNKKVLLCACDLQRLAAVEQ 140
Query: 146 LLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKK 205
L +LG+ V V E+ + IA NA+ A++ D++IVD++GRL+ LM+ELK+
Sbjct: 141 LKVLGEQVGVEVFHEENKS-VKEIANNALKRAKEAQFDVLIVDSAGRLAIDKELMQELKE 199
Query: 206 IKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAA 265
+K+V+ P+E+ + D +GQ+ + F++ + ++G++++K D +KGGI
Sbjct: 200 VKEVLN------PHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALG 253
Query: 266 IAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLN 300
I + +PL FIG GEKI DL +F V L+
Sbjct: 254 ITYQLGLPLRFIGSGEKIPDLDVFMPERIVGRLMG 288
>sp|P49969|SR542_HORVU Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare
GN=SRP54-2 PE=2 SV=1
Length = 497
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 159/301 (52%), Gaps = 13/301 (4%)
Query: 6 ITRLKESLSKTACNLK-SLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYS 64
+ +L S+S+ + + ++++K+ NE+ LL++DV F+ + + ++KI+
Sbjct: 3 LAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIVNL 62
Query: 65 KKLFNTEQVRNVLHNL----LVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLA 120
+ L R ++ L N+L + KK KP V+M VG+ G GKTTT K A
Sbjct: 63 ETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTKYA 122
Query: 121 NYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKK 180
Y +++ L DTFRA A++QL +P +DP IA + +K+
Sbjct: 123 YYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFRKE 182
Query: 181 NTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEF 240
N+D++I+DTSGR ++ L E++++ + + P + ++DG+ GQ Q + F
Sbjct: 183 NSDLIIIDTSGRHKQEAALFEEMRQVAEATK------PDLVIFVMDGSIGQAAFDQAQAF 236
Query: 241 SKILRITGLIITKLDGTTK-GGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALL 299
+ + +IITKLDG K GG L+A+A S P+ FIG GE I++ +IF+ FV+ LL
Sbjct: 237 KQSASVGAVIITKLDGHAKGGGALSAVAATKS-PVIFIGTGEHIDEFEIFDVKPFVSRLL 295
Query: 300 N 300
Sbjct: 296 G 296
>sp|Q57565|SRP54_METJA Signal recognition particle 54 kDa protein OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=srp54 PE=1 SV=1
Length = 451
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 168/304 (55%), Gaps = 17/304 (5%)
Query: 5 WITRLKESLSKTACNLKSL-IVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIY 63
+ +L E+L+K LK+ V+KK+ K + +++ L++ADV + + E+++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 64 SKK----LFNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKL 119
+K L E + +++ LV LL K L K VI++VG+ G GKTTT KL
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKKQNVILLVGIQGSGKTTTAAKL 120
Query: 120 ANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVIS-EKKITDPAAIAFNAINIAQ 178
A Y +KR L A DT+R AAYEQL L + VP+ E + P I + +
Sbjct: 121 ARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGME--K 178
Query: 179 KKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIK 238
K D++I+DT+GR + L+ E+K+IK++ P EI L+IDG GQ Q K
Sbjct: 179 FKKADVLIIDTAGRHKEEKGLLEEMKQIKEITN------PDEIILVIDGTIGQQAGIQAK 232
Query: 239 EFSKIL-RITGLIITKLDGTTK-GGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVN 296
F + + I +I+TKLDG+ K GG L+A+A+ + P+ FIGIGE I+DL+ F+ F++
Sbjct: 233 AFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKA-PIKFIGIGEGIDDLEPFDPKKFIS 291
Query: 297 ALLN 300
LL
Sbjct: 292 RLLG 295
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,104,847
Number of Sequences: 539616
Number of extensions: 4061530
Number of successful extensions: 20785
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 20202
Number of HSP's gapped (non-prelim): 382
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)