Query psy2881
Match_columns 302
No_of_seqs 409 out of 2761
Neff 8.2
Searched_HMMs 13730
Date Fri Aug 16 19:16:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2881.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2881hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qy9a2 c.37.1.10 (A:285-495) 100.0 7.7E-44 5.6E-48 304.8 24.3 210 92-301 2-211 (211)
2 d1vmaa2 c.37.1.10 (A:82-294) G 100.0 7E-43 5.1E-47 299.6 21.7 210 92-301 4-213 (213)
3 d1okkd2 c.37.1.10 (D:97-303) G 100.0 1.6E-41 1.1E-45 290.2 22.1 203 97-299 4-206 (207)
4 d1j8yf2 c.37.1.10 (F:87-297) G 100.0 2.5E-40 1.8E-44 283.3 21.5 201 95-301 8-210 (211)
5 d1ls1a2 c.37.1.10 (A:89-295) G 100.0 1.1E-39 8E-44 279.0 21.1 199 97-301 8-206 (207)
6 d1l2ta_ c.37.1.12 (A:) MJ0796 99.9 1.9E-28 1.4E-32 211.6 6.8 137 88-224 20-209 (230)
7 d2awna2 c.37.1.12 (A:4-235) Ma 99.9 6.4E-28 4.7E-32 208.4 7.9 140 87-226 14-196 (232)
8 d1v43a3 c.37.1.12 (A:7-245) Hy 99.9 5.8E-28 4.2E-32 209.4 5.5 140 87-226 20-202 (239)
9 d3d31a2 c.37.1.12 (A:1-229) Su 99.9 7E-28 5.1E-32 207.6 5.1 139 88-226 15-193 (229)
10 d3dhwc1 c.37.1.12 (C:1-240) Me 99.9 6.9E-28 5E-32 209.2 4.7 141 87-227 19-207 (240)
11 d1ji0a_ c.37.1.12 (A:) Branche 99.9 1.3E-27 9.4E-32 208.3 5.2 141 87-228 20-206 (240)
12 d1g2912 c.37.1.12 (1:1-240) Ma 99.9 6.2E-28 4.5E-32 209.5 3.0 141 87-227 17-206 (240)
13 d1oxxk2 c.37.1.12 (K:1-242) Gl 99.9 9.1E-28 6.7E-32 208.3 2.2 142 87-228 19-208 (242)
14 d1g6ha_ c.37.1.12 (A:) MJ1267 99.9 1.6E-26 1.2E-30 203.1 5.6 141 87-228 18-217 (254)
15 d1vpla_ c.37.1.12 (A:) Putativ 99.9 2.5E-26 1.8E-30 199.7 6.4 141 87-228 16-200 (238)
16 d1b0ua_ c.37.1.12 (A:) ATP-bin 99.9 4.1E-26 3E-30 200.6 4.8 141 87-228 16-216 (258)
17 d2onka1 c.37.1.12 (A:1-240) Mo 99.9 1.3E-25 9.4E-30 194.3 5.5 137 91-228 17-194 (240)
18 d1jj7a_ c.37.1.12 (A:) Peptide 99.9 2E-25 1.5E-29 195.5 6.6 138 87-224 28-215 (251)
19 d1sgwa_ c.37.1.12 (A:) Putativ 99.9 5.2E-25 3.8E-29 186.9 8.0 136 86-221 14-186 (200)
20 d2pmka1 c.37.1.12 (A:467-707) 99.9 8.5E-25 6.2E-29 190.2 8.2 137 87-225 17-202 (241)
21 d3b60a1 c.37.1.12 (A:329-581) 99.9 1.4E-24 1E-28 190.4 9.1 136 87-224 29-214 (253)
22 d1mv5a_ c.37.1.12 (A:) Multidr 99.9 3.9E-25 2.9E-29 192.7 5.0 138 87-226 16-203 (242)
23 d1l7vc_ c.37.1.12 (C:) ABC tra 99.9 2.1E-24 1.5E-28 187.0 7.4 140 87-228 13-199 (231)
24 d2hyda1 c.37.1.12 (A:324-578) 99.9 5.1E-24 3.7E-28 186.7 5.6 138 86-225 31-217 (255)
25 d1r0wa_ c.37.1.12 (A:) Cystic 99.9 3.4E-23 2.5E-27 184.1 2.6 140 84-224 47-221 (281)
26 d1ye8a1 c.37.1.11 (A:1-178) Hy 99.5 1.6E-14 1.2E-18 117.9 6.4 118 102-221 3-140 (178)
27 g1f2t.1 c.37.1.12 (A:,B:) Rad5 99.1 1.3E-11 9.3E-16 107.5 4.7 51 173-224 217-270 (292)
28 d1vmaa1 a.24.13.1 (A:1-81) Sig 99.1 1.1E-10 8.1E-15 83.1 8.8 58 3-60 1-62 (81)
29 d2qy9a1 a.24.13.1 (A:201-284) 99.0 5.1E-10 3.7E-14 80.2 7.9 77 12-88 2-82 (84)
30 g1ii8.1 c.37.1.12 (A:,B:) Rad5 98.5 6.1E-08 4.4E-12 84.9 7.0 45 179-224 300-347 (369)
31 d1bifa1 c.37.1.7 (A:37-249) 6- 98.4 3E-08 2.2E-12 81.8 2.7 41 99-139 2-42 (213)
32 d1ls1a1 a.24.13.1 (A:1-88) Sig 98.4 6E-07 4.4E-11 64.0 9.2 79 5-86 1-87 (88)
33 d2qm8a1 c.37.1.10 (A:5-327) Me 98.4 3.4E-06 2.5E-10 74.7 15.5 146 97-259 49-204 (323)
34 d2p67a1 c.37.1.10 (A:1-327) LA 98.4 1.3E-06 9.2E-11 77.6 11.6 145 97-258 52-206 (327)
35 d1np6a_ c.37.1.10 (A:) Molybdo 98.3 2.8E-07 2E-11 72.9 5.4 38 101-138 4-41 (170)
36 d1cr2a_ c.37.1.11 (A:) Gene 4 98.3 3.7E-06 2.7E-10 72.2 12.0 123 96-219 32-195 (277)
37 d1khta_ c.37.1.1 (A:) Adenylat 98.2 9.5E-09 6.9E-13 82.8 -4.9 35 100-134 2-36 (190)
38 d1nlfa_ c.37.1.11 (A:) Hexamer 98.2 3.4E-06 2.5E-10 72.1 10.4 122 97-219 27-178 (274)
39 d1tf7a2 c.37.1.11 (A:256-497) 98.2 2E-06 1.4E-10 72.2 8.5 124 96-219 23-160 (242)
40 d1j8yf1 a.24.13.1 (F:3-86) Sig 98.2 5.3E-06 3.9E-10 58.4 9.2 75 5-86 1-83 (84)
41 d1xjca_ c.37.1.10 (A:) Molybdo 98.2 7.9E-07 5.7E-11 70.7 5.1 39 100-138 2-40 (165)
42 d2i3ba1 c.37.1.11 (A:1-189) Ca 98.1 7.2E-07 5.2E-11 71.0 3.8 38 101-138 3-40 (189)
43 d1g3qa_ c.37.1.10 (A:) Cell di 98.0 2.5E-05 1.8E-09 64.7 12.4 41 99-139 2-43 (237)
44 d1p9ra_ c.37.1.11 (A:) Extrace 98.0 5E-06 3.7E-10 75.7 7.8 86 97-197 156-243 (401)
45 d1wb9a2 c.37.1.12 (A:567-800) 98.0 6E-06 4.3E-10 69.7 7.4 34 88-122 31-64 (234)
46 d1hyqa_ c.37.1.10 (A:) Cell di 97.9 4.3E-05 3.1E-09 63.2 12.0 41 100-140 2-43 (232)
47 d1g6oa_ c.37.1.11 (A:) Hexamer 97.9 1.3E-05 9.3E-10 70.9 7.9 82 99-193 166-247 (323)
48 d1okkd1 a.24.13.1 (D:21-78) Si 97.8 9E-06 6.5E-10 52.9 4.7 54 27-87 5-58 (58)
49 d2dy1a2 c.37.1.8 (A:8-274) Elo 97.8 5.5E-05 4E-09 64.8 11.1 139 101-271 4-147 (267)
50 d1tf7a1 c.37.1.11 (A:14-255) C 97.8 3.3E-05 2.4E-09 63.5 9.5 42 96-137 23-65 (242)
51 d1lv7a_ c.37.1.20 (A:) AAA dom 97.8 5.5E-05 4E-09 64.4 11.1 72 96-190 42-113 (256)
52 d2c78a3 c.37.1.8 (A:9-212) Elo 97.8 2.8E-05 2.1E-09 63.9 8.6 125 101-258 5-134 (204)
53 d1yj5a2 c.37.1.1 (A:351-522) 5 97.8 4.3E-05 3.1E-09 61.0 9.4 35 96-134 11-45 (172)
54 d1rz3a_ c.37.1.6 (A:) Hypothet 97.8 1.8E-05 1.3E-09 63.4 6.9 41 97-137 20-60 (198)
55 d1u94a1 c.37.1.11 (A:6-268) Re 97.8 9.3E-05 6.8E-09 63.2 11.3 90 96-191 51-142 (263)
56 d1ewqa2 c.37.1.12 (A:542-765) 97.8 1.8E-05 1.3E-09 66.2 6.5 29 93-122 30-58 (224)
57 d1gvnb_ c.37.1.21 (B:) Plasmid 97.8 2.2E-05 1.6E-09 66.4 7.2 51 69-124 7-57 (273)
58 d1knqa_ c.37.1.17 (A:) Glucona 97.8 9E-06 6.6E-10 64.0 4.3 27 97-123 4-30 (171)
59 d1m8pa3 c.37.1.15 (A:391-573) 97.7 9.4E-06 6.8E-10 64.0 4.3 30 97-126 4-33 (183)
60 d1znwa1 c.37.1.1 (A:20-201) Gu 97.7 6.1E-06 4.5E-10 66.4 3.1 27 99-125 2-28 (182)
61 d1h65a_ c.37.1.8 (A:) Chloropl 97.7 1.5E-05 1.1E-09 68.0 5.1 23 100-122 33-55 (257)
62 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.7 9.9E-06 7.2E-10 63.9 3.4 26 98-123 3-28 (176)
63 d2bv3a2 c.37.1.8 (A:7-282) Elo 97.7 0.00015 1.1E-08 62.2 11.0 143 100-274 7-155 (276)
64 d1lw7a2 c.37.1.1 (A:220-411) T 97.6 1.1E-05 8E-10 63.8 3.1 25 99-123 7-31 (192)
65 d1nija1 c.37.1.10 (A:2-223) Hy 97.6 0.0002 1.5E-08 59.4 11.2 173 101-281 5-188 (222)
66 d1yrba1 c.37.1.10 (A:1-244) AT 97.6 2.4E-05 1.7E-09 65.1 5.3 36 101-137 2-37 (244)
67 d1xp8a1 c.37.1.11 (A:15-282) R 97.6 0.00018 1.3E-08 61.5 10.4 86 96-191 54-145 (268)
68 d1byia_ c.37.1.10 (A:) Dethiob 97.6 0.00043 3.1E-08 56.1 12.3 38 100-137 2-40 (224)
69 d1x6va3 c.37.1.4 (A:34-228) Ad 97.6 1.5E-05 1.1E-09 63.9 3.0 33 98-130 18-50 (195)
70 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.6 2.5E-05 1.8E-09 63.1 4.3 37 97-137 4-40 (194)
71 d1tq4a_ c.37.1.8 (A:) Interfer 97.5 0.00018 1.3E-08 65.1 10.3 24 101-124 58-81 (400)
72 d1wgwa_ a.24.13.1 (A:) Signal 97.5 8.9E-05 6.5E-09 53.6 6.5 76 8-86 9-92 (99)
73 d1nksa_ c.37.1.1 (A:) Adenylat 97.5 4.1E-05 3E-09 60.8 5.2 34 100-133 2-35 (194)
74 d1e32a2 c.37.1.20 (A:201-458) 97.5 8.9E-05 6.5E-09 63.0 7.6 71 97-190 36-106 (258)
75 d1y63a_ c.37.1.1 (A:) Probable 97.5 2.5E-05 1.8E-09 61.4 3.7 27 97-123 3-29 (174)
76 d1qhxa_ c.37.1.3 (A:) Chloramp 97.5 2.6E-05 1.9E-09 61.2 3.7 26 99-124 3-28 (178)
77 d2bdta1 c.37.1.25 (A:1-176) Hy 97.5 2.5E-05 1.9E-09 61.0 3.6 32 100-134 3-34 (176)
78 d1g7sa4 c.37.1.8 (A:1-227) Ini 97.5 0.00015 1.1E-08 60.3 8.6 24 101-124 7-30 (227)
79 d1mo6a1 c.37.1.11 (A:1-269) Re 97.5 0.00027 1.9E-08 60.4 10.4 91 95-191 56-148 (269)
80 d1ly1a_ c.37.1.1 (A:) Polynucl 97.5 2.9E-05 2.1E-09 59.9 3.6 33 100-135 3-35 (152)
81 g1xew.1 c.37.1.12 (X:,Y:) Smc 97.5 2.8E-05 2E-09 67.9 3.8 31 92-123 20-50 (329)
82 d1kaga_ c.37.1.2 (A:) Shikimat 97.5 2.9E-05 2.1E-09 59.9 3.4 23 101-123 4-26 (169)
83 d1u0la2 c.37.1.8 (A:69-293) Pr 97.4 2.4E-05 1.7E-09 65.4 2.7 34 98-131 94-127 (225)
84 d1qhla_ c.37.1.12 (A:) Cell di 97.4 2.1E-06 1.5E-10 69.1 -4.6 33 91-124 17-49 (222)
85 d1nn5a_ c.37.1.1 (A:) Thymidyl 97.4 0.00016 1.2E-08 59.4 7.2 40 97-136 1-40 (209)
86 d1ofha_ c.37.1.20 (A:) HslU {H 97.4 0.00012 8.4E-09 64.0 6.4 37 98-136 48-84 (309)
87 d1rkba_ c.37.1.1 (A:) Adenylat 97.4 4.7E-05 3.4E-09 59.5 3.4 22 102-123 7-28 (173)
88 d1ukza_ c.37.1.1 (A:) Uridylat 97.4 6.1E-05 4.4E-09 60.9 4.1 37 97-137 6-42 (196)
89 d1s96a_ c.37.1.1 (A:) Guanylat 97.3 5.2E-05 3.8E-09 62.4 3.7 27 98-124 1-27 (205)
90 d1e69a_ c.37.1.12 (A:) Smc hea 97.3 4.4E-05 3.2E-09 65.9 3.4 44 179-224 239-285 (308)
91 d1d2na_ c.37.1.20 (A:) Hexamer 97.3 7.6E-05 5.5E-09 63.1 4.7 71 98-190 39-109 (246)
92 d1sq5a_ c.37.1.6 (A:) Pantothe 97.3 9.8E-05 7.1E-09 64.5 5.5 42 97-138 78-121 (308)
93 d1w44a_ c.37.1.11 (A:) NTPase 97.3 0.00043 3.2E-08 60.5 9.7 69 99-190 123-191 (321)
94 d1yksa1 c.37.1.14 (A:185-324) 97.3 0.00046 3.4E-08 51.5 8.5 39 96-134 4-43 (140)
95 d1r7ra3 c.37.1.20 (A:471-735) 97.3 0.00019 1.4E-08 61.2 6.9 72 96-190 38-109 (265)
96 d1sxja2 c.37.1.20 (A:295-547) 97.3 0.00016 1.2E-08 60.4 6.3 35 98-135 51-85 (253)
97 d1ixza_ c.37.1.20 (A:) AAA dom 97.3 0.00011 7.8E-09 62.2 4.7 69 99-190 42-110 (247)
98 d3adka_ c.37.1.1 (A:) Adenylat 97.2 6.5E-05 4.7E-09 60.7 3.1 38 97-138 6-43 (194)
99 d1uj2a_ c.37.1.6 (A:) Uridine- 97.2 0.00012 8.8E-09 59.8 4.8 39 99-137 2-45 (213)
100 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.2 0.0001 7.3E-09 59.2 4.0 37 98-138 2-38 (190)
101 d4tmka_ c.37.1.1 (A:) Thymidyl 97.2 0.00025 1.8E-08 57.8 6.4 33 98-130 1-33 (210)
102 d1fnna2 c.37.1.20 (A:1-276) CD 97.2 0.00037 2.7E-08 58.1 7.2 31 98-128 42-72 (276)
103 d1w1wa_ c.37.1.12 (A:) Smc hea 97.2 0.00011 7.9E-09 65.9 3.9 27 94-120 20-46 (427)
104 d1t9ha2 c.37.1.8 (A:68-298) Pr 97.2 2.9E-05 2.1E-09 65.0 0.0 34 98-131 96-129 (231)
105 d1viaa_ c.37.1.2 (A:) Shikimat 97.1 0.00011 8.2E-09 57.6 3.5 22 102-123 3-24 (161)
106 d1in4a2 c.37.1.20 (A:17-254) H 97.1 0.00027 2E-08 58.6 6.0 39 101-141 37-75 (238)
107 d1ihua1 c.37.1.10 (A:1-296) Ar 97.1 0.00025 1.8E-08 60.5 5.8 42 97-138 6-47 (296)
108 d1m7ga_ c.37.1.4 (A:) Adenosin 97.1 9.7E-05 7.1E-09 60.8 3.0 40 97-136 22-62 (208)
109 d1qvra3 c.37.1.20 (A:536-850) 97.1 0.00077 5.6E-08 58.8 9.1 51 70-124 28-78 (315)
110 d1teva_ c.37.1.1 (A:) UMP/CMP 97.1 0.00014 1.1E-08 58.3 4.0 34 100-137 2-35 (194)
111 d1gkya_ c.37.1.1 (A:) Guanylat 97.1 0.00012 8.4E-09 59.0 3.2 23 102-124 4-26 (186)
112 d1zaka1 c.37.1.1 (A:3-127,A:15 97.1 0.00013 9.1E-09 58.6 3.2 25 99-123 3-27 (189)
113 d1cp2a_ c.37.1.10 (A:) Nitroge 97.1 0.00026 1.9E-08 59.9 5.5 39 100-138 2-40 (269)
114 d1kgda_ c.37.1.1 (A:) Guanylat 97.1 0.00017 1.3E-08 57.7 3.8 24 100-123 4-27 (178)
115 d1a7ja_ c.37.1.6 (A:) Phosphor 97.0 9.1E-05 6.7E-09 63.9 2.2 38 101-138 6-43 (288)
116 d1zina1 c.37.1.1 (A:1-125,A:16 97.0 0.00018 1.3E-08 56.9 3.7 23 101-123 2-24 (182)
117 d1lvga_ c.37.1.1 (A:) Guanylat 97.0 0.00017 1.2E-08 58.3 3.4 23 102-124 3-25 (190)
118 d2iyva1 c.37.1.2 (A:2-166) Shi 97.0 0.00018 1.3E-08 56.5 3.4 23 102-124 4-26 (165)
119 d1r6bx3 c.37.1.20 (X:437-751) 97.0 0.0011 8.1E-08 57.7 9.0 27 98-124 51-77 (315)
120 d1e6ca_ c.37.1.2 (A:) Shikimat 97.0 0.00017 1.3E-08 56.8 3.4 23 101-123 4-26 (170)
121 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.0 0.00019 1.4E-08 57.1 3.7 23 101-123 2-24 (182)
122 d1szpa2 c.37.1.11 (A:145-395) 97.0 0.0013 9.3E-08 53.8 9.0 42 96-137 31-78 (251)
123 d1svia_ c.37.1.8 (A:) Probable 97.0 0.00017 1.3E-08 57.9 3.2 22 101-122 25-46 (195)
124 d1ihua2 c.37.1.10 (A:308-586) 97.0 0.00046 3.3E-08 58.5 6.1 41 98-138 19-59 (279)
125 d1l8qa2 c.37.1.20 (A:77-289) C 96.9 0.00057 4.2E-08 56.2 6.2 96 102-219 39-138 (213)
126 d1ixsb2 c.37.1.20 (B:4-242) Ho 96.9 0.00018 1.3E-08 59.8 3.0 36 101-138 37-72 (239)
127 d1iqpa2 c.37.1.20 (A:2-232) Re 96.9 0.00067 4.9E-08 55.8 6.5 24 101-124 47-70 (231)
128 d2afhe1 c.37.1.10 (E:1-289) Ni 96.9 0.00045 3.3E-08 59.1 5.5 40 100-139 3-42 (289)
129 d1ckea_ c.37.1.1 (A:) CMP kina 96.9 0.00025 1.8E-08 57.7 3.6 37 101-141 5-41 (225)
130 d1gsia_ c.37.1.1 (A:) Thymidyl 96.9 0.00085 6.2E-08 54.1 6.8 37 101-137 2-38 (208)
131 d2cdna1 c.37.1.1 (A:1-181) Ade 96.9 0.00029 2.1E-08 55.9 3.6 23 101-123 2-24 (181)
132 d1g41a_ c.37.1.20 (A:) HslU {H 96.9 0.00045 3.3E-08 63.2 5.4 26 99-124 49-74 (443)
133 d2cxxa1 c.37.1.8 (A:2-185) GTP 96.9 0.00022 1.6E-08 56.4 2.9 21 101-121 2-22 (184)
134 d1mkya1 c.37.1.8 (A:2-172) Pro 96.9 0.00026 1.9E-08 55.6 3.2 22 101-122 2-23 (171)
135 d2vp4a1 c.37.1.1 (A:12-208) De 96.8 0.00025 1.8E-08 56.9 3.1 27 97-123 7-33 (197)
136 d1n0wa_ c.37.1.11 (A:) DNA rep 96.8 0.0003 2.1E-08 56.3 3.3 29 96-124 20-48 (242)
137 d1e4va1 c.37.1.1 (A:1-121,A:15 96.8 0.00035 2.5E-08 55.3 3.6 23 101-123 2-24 (179)
138 d2qtvb1 c.37.1.8 (B:24-189) SA 96.8 0.00031 2.2E-08 53.8 3.2 22 101-122 2-23 (166)
139 d1r8sa_ c.37.1.8 (A:) ADP-ribo 96.8 0.00033 2.4E-08 53.7 3.2 21 102-122 3-23 (160)
140 d1egaa1 c.37.1.8 (A:4-182) GTP 96.8 0.00034 2.5E-08 55.0 3.3 21 101-121 7-27 (179)
141 d1upta_ c.37.1.8 (A:) ADP-ribo 96.8 0.00033 2.4E-08 54.0 3.2 22 101-122 7-28 (169)
142 d1q3ta_ c.37.1.1 (A:) CMP kina 96.8 0.00038 2.8E-08 56.8 3.7 38 101-142 5-42 (223)
143 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.8 0.00037 2.7E-08 56.1 3.5 35 100-138 7-41 (189)
144 d1lnza2 c.37.1.8 (A:158-342) O 96.7 0.0002 1.5E-08 57.0 1.6 20 102-121 4-23 (185)
145 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 96.7 0.00034 2.5E-08 54.9 3.0 25 98-122 12-36 (186)
146 d1nrjb_ c.37.1.8 (B:) Signal r 96.7 0.00039 2.9E-08 56.0 3.4 21 101-121 5-25 (209)
147 d1wf3a1 c.37.1.8 (A:3-180) GTP 96.7 0.0004 2.9E-08 54.9 3.4 22 101-122 7-28 (178)
148 d2gj8a1 c.37.1.8 (A:216-376) P 96.7 0.00047 3.4E-08 53.2 3.7 24 99-122 1-24 (161)
149 d1odfa_ c.37.1.6 (A:) Hypothet 96.7 0.0023 1.7E-07 54.8 8.4 42 97-138 25-69 (286)
150 d1akya1 c.37.1.1 (A:3-130,A:16 96.7 0.00047 3.5E-08 54.7 3.6 32 101-136 4-35 (180)
151 d1htwa_ c.37.1.18 (A:) Hypothe 96.7 0.0014 1.1E-07 51.1 6.3 44 76-125 16-59 (158)
152 d2a5yb3 c.37.1.20 (B:109-385) 96.6 0.0055 4E-07 52.0 10.4 25 98-122 43-67 (277)
153 d1um8a_ c.37.1.20 (A:) ClpX {H 96.6 0.0011 8.1E-08 58.9 5.9 80 35-123 9-92 (364)
154 d1ksha_ c.37.1.8 (A:) ADP-ribo 96.6 0.00047 3.4E-08 53.6 2.8 21 101-121 4-24 (165)
155 d1tmka_ c.37.1.1 (A:) Thymidyl 96.6 0.00072 5.2E-08 55.5 4.1 29 97-125 1-29 (214)
156 d1a1va1 c.37.1.14 (A:190-325) 96.6 0.00089 6.5E-08 50.4 4.2 33 98-133 7-39 (136)
157 d1udxa2 c.37.1.8 (A:157-336) O 96.5 0.00033 2.4E-08 55.5 1.6 21 102-122 4-24 (180)
158 d1mkya2 c.37.1.8 (A:173-358) P 96.5 0.00086 6.2E-08 53.0 4.0 24 99-122 8-31 (186)
159 d1uf9a_ c.37.1.1 (A:) Dephosph 96.5 0.00078 5.7E-08 53.8 3.8 23 98-120 2-24 (191)
160 d1sxjd2 c.37.1.20 (D:26-262) R 96.5 0.00067 4.9E-08 55.8 3.4 23 102-124 36-58 (237)
161 d1p5zb_ c.37.1.1 (B:) Deoxycyt 96.5 0.00045 3.2E-08 57.0 2.3 27 98-124 1-27 (241)
162 d1pzna2 c.37.1.11 (A:96-349) D 96.4 0.0017 1.2E-07 53.6 5.3 41 96-136 33-79 (254)
163 d2fh5b1 c.37.1.8 (B:63-269) Si 96.4 0.0009 6.5E-08 54.1 3.4 22 101-122 2-23 (207)
164 d2fnaa2 c.37.1.20 (A:1-283) Ar 96.3 0.0012 9E-08 54.8 4.1 25 99-123 29-53 (283)
165 d1zj6a1 c.37.1.8 (A:2-178) ADP 96.3 0.0012 9E-08 51.4 3.9 24 98-121 14-37 (177)
166 d2bmfa2 c.37.1.14 (A:178-482) 96.3 0.0042 3.1E-07 52.6 7.6 37 96-133 6-44 (305)
167 d1sxjb2 c.37.1.20 (B:7-230) Re 96.3 0.0011 7.9E-08 54.3 3.4 24 102-125 39-62 (224)
168 d1zd9a1 c.37.1.8 (A:18-181) AD 96.3 0.0011 7.7E-08 51.6 3.2 21 101-121 4-24 (164)
169 d1w5sa2 c.37.1.20 (A:7-293) CD 96.3 0.00081 5.9E-08 56.3 2.5 24 101-124 48-71 (287)
170 d3raba_ c.37.1.8 (A:) Rab3a {R 96.2 0.0011 8.3E-08 51.7 3.2 20 102-121 8-27 (169)
171 d1ky3a_ c.37.1.8 (A:) Rab-rela 96.2 0.0012 9E-08 51.6 3.2 20 102-121 5-24 (175)
172 d1r6bx2 c.37.1.20 (X:169-436) 96.1 0.0024 1.7E-07 54.2 4.9 26 100-125 40-65 (268)
173 d1v5wa_ c.37.1.11 (A:) Meiotic 96.1 0.0018 1.3E-07 53.2 4.1 28 96-123 34-61 (258)
174 d1sxjc2 c.37.1.20 (C:12-238) R 96.1 0.0014 1E-07 53.5 3.4 23 102-124 38-60 (227)
175 d2f9la1 c.37.1.8 (A:8-182) Rab 96.1 0.0014 1E-07 51.5 3.2 20 102-121 7-26 (175)
176 d1svma_ c.37.1.20 (A:) Papillo 96.1 0.002 1.4E-07 57.2 4.5 34 96-132 151-184 (362)
177 d1sxje2 c.37.1.20 (E:4-255) Re 96.1 0.0012 9.1E-08 54.6 2.9 22 102-123 36-57 (252)
178 d1puia_ c.37.1.8 (A:) Probable 96.1 0.00091 6.6E-08 52.4 1.8 24 99-122 16-39 (188)
179 d1z2aa1 c.37.1.8 (A:8-171) Rab 96.0 0.0016 1.2E-07 50.4 3.2 20 102-121 5-24 (164)
180 d2i1qa2 c.37.1.11 (A:65-322) D 96.0 0.0019 1.3E-07 52.8 3.7 28 96-123 31-58 (258)
181 d1ctqa_ c.37.1.8 (A:) cH-p21 R 96.0 0.0017 1.2E-07 50.5 3.1 21 101-121 5-25 (166)
182 d2jdid3 c.37.1.11 (D:82-357) C 96.0 0.021 1.5E-06 48.3 10.4 43 94-136 63-106 (276)
183 d1xzpa2 c.37.1.8 (A:212-371) T 96.0 0.0004 2.9E-08 53.6 -0.7 21 102-122 3-23 (160)
184 d1fzqa_ c.37.1.8 (A:) ADP-ribo 96.0 0.0013 9.3E-08 51.5 2.4 22 100-121 17-38 (176)
185 d2f7sa1 c.37.1.8 (A:5-190) Rab 95.9 0.0017 1.3E-07 51.3 3.0 20 102-121 8-27 (186)
186 d1jjva_ c.37.1.1 (A:) Dephosph 95.9 0.0019 1.4E-07 52.3 3.2 20 100-119 3-22 (205)
187 d1g16a_ c.37.1.8 (A:) Rab-rela 95.9 0.0019 1.4E-07 50.0 3.1 20 102-121 5-24 (166)
188 d2a5ja1 c.37.1.8 (A:9-181) Rab 95.9 0.002 1.4E-07 50.5 3.2 20 102-121 6-25 (173)
189 d1wb1a4 c.37.1.8 (A:1-179) Elo 95.9 0.0019 1.4E-07 51.0 3.1 21 101-121 7-27 (179)
190 d2erxa1 c.37.1.8 (A:6-176) di- 95.9 0.002 1.4E-07 50.2 3.1 21 101-121 4-24 (171)
191 d2ew1a1 c.37.1.8 (A:4-174) Rab 95.9 0.0021 1.5E-07 50.2 3.1 21 101-121 7-27 (171)
192 d1zunb3 c.37.1.8 (B:16-237) Su 95.9 0.037 2.7E-06 45.2 11.1 66 181-258 88-156 (222)
193 d1kaoa_ c.37.1.8 (A:) Rap2a {H 95.9 0.0022 1.6E-07 49.8 3.2 21 101-121 5-25 (167)
194 d1xtqa1 c.37.1.8 (A:3-169) GTP 95.9 0.0022 1.6E-07 49.8 3.1 22 100-121 5-26 (167)
195 d1vhta_ c.37.1.1 (A:) Dephosph 95.8 0.0024 1.8E-07 51.8 3.4 21 100-120 4-24 (208)
196 d1e9ra_ c.37.1.11 (A:) Bacteri 95.8 0.0037 2.7E-07 56.0 4.9 35 100-134 51-85 (433)
197 d2erya1 c.37.1.8 (A:10-180) r- 95.8 0.0024 1.7E-07 49.8 3.1 21 101-121 7-27 (171)
198 d1xpua3 c.37.1.11 (A:129-417) 95.8 0.0026 1.9E-07 54.5 3.6 33 94-126 38-70 (289)
199 d1z06a1 c.37.1.8 (A:32-196) Ra 95.8 0.0026 1.9E-07 49.1 3.2 20 102-121 5-24 (165)
200 d1z0fa1 c.37.1.8 (A:8-173) Rab 95.7 0.0027 2E-07 49.2 3.2 20 102-121 7-26 (166)
201 d2gjsa1 c.37.1.8 (A:91-258) Ra 95.7 0.0027 2E-07 49.4 3.1 21 102-122 4-24 (168)
202 d2ocpa1 c.37.1.1 (A:37-277) De 95.7 0.0033 2.4E-07 51.7 3.8 27 99-125 2-28 (241)
203 d1xbta1 c.37.1.24 (A:18-150) T 95.7 0.01 7.5E-07 44.7 6.3 37 98-134 1-37 (133)
204 d2bmea1 c.37.1.8 (A:6-179) Rab 95.7 0.0028 2E-07 49.5 3.1 20 102-121 8-27 (174)
205 d1yzqa1 c.37.1.8 (A:14-177) Ra 95.7 0.0029 2.1E-07 48.8 3.1 21 101-121 2-22 (164)
206 d1z0ja1 c.37.1.8 (A:2-168) Rab 95.6 0.003 2.2E-07 49.0 3.2 21 101-121 6-26 (167)
207 d1wp9a1 c.37.1.19 (A:1-200) pu 95.6 0.13 9.2E-06 40.2 13.4 33 102-134 26-59 (200)
208 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 95.6 0.003 2.2E-07 49.8 3.2 20 102-121 5-24 (184)
209 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 95.6 0.003 2.2E-07 49.5 3.1 21 101-121 4-24 (177)
210 d1z08a1 c.37.1.8 (A:17-183) Ra 95.6 0.0033 2.4E-07 48.7 3.2 21 101-121 5-25 (167)
211 d1moza_ c.37.1.8 (A:) ADP-ribo 95.6 0.0023 1.6E-07 50.4 2.2 24 97-120 15-38 (182)
212 d2bcgy1 c.37.1.8 (Y:3-196) GTP 95.6 0.0031 2.3E-07 50.3 3.1 20 102-121 9-28 (194)
213 d1x3sa1 c.37.1.8 (A:2-178) Rab 95.6 0.0033 2.4E-07 49.3 3.2 21 101-121 9-29 (177)
214 d2atva1 c.37.1.8 (A:5-172) Ras 95.6 0.0033 2.4E-07 48.9 3.2 20 102-121 5-24 (168)
215 d1wmsa_ c.37.1.8 (A:) Rab9a {H 95.6 0.0033 2.4E-07 49.1 3.2 20 102-121 9-28 (174)
216 d2g3ya1 c.37.1.8 (A:73-244) GT 95.5 0.0032 2.3E-07 49.2 3.0 23 101-123 5-27 (172)
217 d1g8pa_ c.37.1.20 (A:) ATPase 95.5 0.0017 1.3E-07 56.6 1.4 25 101-125 30-54 (333)
218 d2fn4a1 c.37.1.8 (A:24-196) r- 95.5 0.0036 2.6E-07 48.9 3.1 21 101-121 8-28 (173)
219 d1e0sa_ c.37.1.8 (A:) ADP-ribo 95.5 0.0022 1.6E-07 50.1 1.8 22 100-121 13-34 (173)
220 d1r2qa_ c.37.1.8 (A:) Rab5a {H 95.5 0.0038 2.8E-07 48.5 3.2 21 101-121 8-28 (170)
221 d1qvra2 c.37.1.20 (A:149-535) 95.5 0.016 1.2E-06 51.6 7.7 24 101-124 45-68 (387)
222 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 95.4 0.0043 3.2E-07 48.1 3.2 21 101-121 5-25 (170)
223 d2g6ba1 c.37.1.8 (A:58-227) Ra 95.3 0.0045 3.2E-07 48.1 3.2 20 102-121 9-28 (170)
224 d1mh1a_ c.37.1.8 (A:) Rac {Hum 95.3 0.0045 3.3E-07 48.7 3.2 21 101-121 7-27 (183)
225 d1a5ta2 c.37.1.20 (A:1-207) de 95.3 0.0068 4.9E-07 49.1 4.2 28 99-126 24-51 (207)
226 d1x1ra1 c.37.1.8 (A:10-178) Ra 95.3 0.0048 3.5E-07 48.0 3.2 21 101-121 6-26 (169)
227 d1i2ma_ c.37.1.8 (A:) Ran {Hum 95.2 0.0026 1.9E-07 49.7 1.5 21 101-121 5-25 (170)
228 d1kkma_ c.91.1.2 (A:) HPr kina 95.2 0.0066 4.8E-07 48.1 3.8 23 98-120 13-35 (176)
229 d1c1ya_ c.37.1.8 (A:) Rap1A {H 95.1 0.0057 4.2E-07 47.3 3.2 21 101-121 5-25 (167)
230 d1knxa2 c.91.1.2 (A:133-309) H 95.1 0.007 5.1E-07 48.0 3.7 23 98-120 14-36 (177)
231 d1svsa1 c.37.1.8 (A:32-60,A:18 95.1 0.0069 5E-07 47.5 3.7 28 101-128 4-31 (195)
232 d1azta2 c.37.1.8 (A:35-65,A:20 95.1 0.0052 3.8E-07 50.2 2.9 29 100-128 7-36 (221)
233 d2fu5c1 c.37.1.8 (C:3-175) Rab 95.0 0.0033 2.4E-07 49.1 1.6 20 102-121 9-28 (173)
234 d1u8za_ c.37.1.8 (A:) Ras-rela 95.0 0.0064 4.6E-07 47.2 3.2 21 101-121 6-26 (168)
235 d2bmja1 c.37.1.8 (A:66-240) Ce 95.0 0.0065 4.7E-07 47.7 3.2 21 101-121 7-27 (175)
236 d1njfa_ c.37.1.20 (A:) delta p 95.0 0.0085 6.2E-07 49.4 4.1 28 99-126 34-61 (239)
237 d2atxa1 c.37.1.8 (A:9-193) Rho 95.0 0.0063 4.6E-07 48.0 3.1 21 101-121 11-31 (185)
238 d1zcba2 c.37.1.8 (A:47-75,A:20 95.0 0.0059 4.3E-07 48.3 2.9 28 101-128 4-33 (200)
239 d2ngra_ c.37.1.8 (A:) CDC42 {H 94.9 0.0069 5E-07 48.0 3.1 21 101-121 5-25 (191)
240 d1m7ba_ c.37.1.8 (A:) RhoE (RN 94.9 0.0071 5.2E-07 47.5 3.1 21 101-121 4-24 (179)
241 d1xx6a1 c.37.1.24 (A:2-142) Th 94.9 0.023 1.7E-06 43.1 5.9 38 97-134 5-42 (141)
242 d1deka_ c.37.1.1 (A:) Deoxynuc 94.8 0.0086 6.3E-07 49.1 3.5 22 100-121 2-23 (241)
243 d1n0ua2 c.37.1.8 (A:3-343) Elo 94.7 0.031 2.3E-06 48.7 7.1 21 101-121 19-39 (341)
244 d1ko7a2 c.91.1.2 (A:130-298) H 94.7 0.011 7.7E-07 46.5 3.6 23 98-120 14-36 (169)
245 d1f5na2 c.37.1.8 (A:7-283) Int 94.7 0.0075 5.5E-07 51.3 2.9 23 100-122 33-55 (277)
246 d1jbka_ c.37.1.20 (A:) ClpB, A 94.7 0.011 7.8E-07 47.6 3.7 24 101-124 45-68 (195)
247 d1gkub1 c.37.1.16 (B:1-250) He 94.5 0.0093 6.8E-07 49.0 3.0 37 98-134 57-93 (237)
248 d2akab1 c.37.1.8 (B:6-304) Dyn 94.4 0.023 1.7E-06 48.1 5.6 27 96-123 24-50 (299)
249 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 94.3 0.012 8.8E-07 46.2 3.1 22 101-122 4-25 (200)
250 d2fz4a1 c.37.1.19 (A:24-229) D 94.0 0.1 7.5E-06 41.5 8.5 85 101-192 87-180 (206)
251 d1ny5a2 c.37.1.20 (A:138-384) 93.9 0.12 9.1E-06 42.5 9.1 35 101-135 25-59 (247)
252 d1osna_ c.37.1.1 (A:) Thymidin 93.8 0.016 1.2E-06 50.4 3.3 36 101-136 7-42 (331)
253 d1p6xa_ c.37.1.1 (A:) Thymidin 93.8 0.028 2E-06 48.9 4.8 32 101-133 8-39 (333)
254 d1fx0a3 c.37.1.11 (A:97-372) C 93.7 0.031 2.3E-06 47.2 4.9 42 94-135 62-103 (276)
255 d1c9ka_ c.37.1.11 (A:) Adenosy 93.7 0.027 1.9E-06 44.6 4.2 82 101-191 1-83 (180)
256 d1uaaa1 c.37.1.19 (A:2-307) DE 93.7 0.018 1.3E-06 48.4 3.4 34 101-134 16-53 (306)
257 d2p6ra3 c.37.1.19 (A:1-202) He 93.6 0.014 9.9E-07 46.7 2.3 35 99-133 40-74 (202)
258 d1jwyb_ c.37.1.8 (B:) Dynamin 93.4 0.032 2.4E-06 47.4 4.6 27 99-126 25-52 (306)
259 d1d2ea3 c.37.1.8 (A:55-250) El 93.2 0.042 3.1E-06 43.9 4.7 26 101-126 5-30 (196)
260 d1wxqa1 c.37.1.8 (A:1-319) GTP 93.2 0.021 1.5E-06 49.0 2.9 22 102-123 3-24 (319)
261 d1w36d1 c.37.1.19 (D:2-360) Ex 93.1 0.035 2.5E-06 48.7 4.4 35 99-133 163-201 (359)
262 d1ni3a1 c.37.1.8 (A:11-306) Yc 92.9 0.025 1.8E-06 48.1 3.1 23 100-122 11-33 (296)
263 d1kk1a3 c.37.1.8 (A:6-200) Ini 92.8 0.029 2.1E-06 44.4 3.1 22 102-123 8-29 (195)
264 d2qn6a3 c.37.1.8 (A:2-206) Ini 92.6 0.04 2.9E-06 44.0 3.7 23 101-123 10-32 (205)
265 d1pjra1 c.37.1.19 (A:1-318) DE 92.2 0.046 3.4E-06 46.2 3.8 34 101-134 26-63 (318)
266 d1jala1 c.37.1.8 (A:1-278) Ych 92.1 0.039 2.8E-06 46.4 3.2 22 101-122 4-25 (278)
267 d2gnoa2 c.37.1.20 (A:11-208) g 91.5 0.059 4.3E-06 43.0 3.4 27 98-124 14-40 (198)
268 d1g8fa3 c.37.1.15 (A:390-511) 91.3 0.15 1.1E-05 37.4 5.1 40 97-136 4-45 (122)
269 d2jfga3 c.72.2.1 (A:94-297) UD 91.0 0.071 5.1E-06 42.1 3.5 34 100-135 12-45 (204)
270 d1gg4a4 c.72.2.1 (A:99-312) UD 91.0 0.11 8.2E-06 40.8 4.8 36 98-135 1-36 (214)
271 d1jnya3 c.37.1.8 (A:4-227) Elo 90.9 0.083 6E-06 42.8 3.9 21 101-121 5-25 (224)
272 d1e2ka_ c.37.1.1 (A:) Thymidin 90.8 0.053 3.9E-06 46.9 2.7 32 101-134 6-37 (329)
273 d2eyqa3 c.37.1.19 (A:546-778) 90.6 3.4 0.00025 33.1 13.9 38 97-134 74-111 (233)
274 d1tuea_ c.37.1.20 (A:) Replica 90.3 0.1 7.5E-06 41.8 3.8 31 97-130 51-81 (205)
275 d2jdia3 c.37.1.11 (A:95-379) C 90.2 0.062 4.5E-06 45.5 2.5 29 94-122 63-91 (285)
276 d1j3ba1 c.91.1.1 (A:212-529) P 90.2 0.07 5.1E-06 45.8 2.8 20 97-116 12-31 (318)
277 d2olra1 c.91.1.1 (A:228-540) P 90.0 0.073 5.3E-06 45.5 2.8 37 264-300 199-237 (313)
278 d1u0ja_ c.37.1.20 (A:) Rep 40 90.0 0.11 7.8E-06 43.5 3.9 27 97-123 102-128 (267)
279 d1g5ta_ c.37.1.11 (A:) ATP:cor 89.6 0.84 6.1E-05 34.6 8.6 36 98-134 2-37 (157)
280 d2b8ta1 c.37.1.24 (A:11-149) T 89.3 0.28 2E-05 36.6 5.4 37 99-135 2-38 (139)
281 d1ii2a1 c.91.1.1 (A:201-523) P 89.0 0.098 7.1E-06 44.9 2.8 20 97-116 12-31 (323)
282 d1lkxa_ c.37.1.9 (A:) Myosin S 87.9 0.18 1.3E-05 47.7 4.3 28 97-124 84-111 (684)
283 d1p3da3 c.72.2.1 (A:107-321) U 87.8 0.14 1E-05 40.7 2.9 31 100-132 13-43 (215)
284 d1puja_ c.37.1.8 (A:) Probable 87.8 0.19 1.4E-05 41.8 3.9 25 98-122 111-135 (273)
285 d1br2a2 c.37.1.9 (A:80-789) My 87.5 0.2 1.4E-05 47.8 4.3 28 97-124 89-116 (710)
286 d1d0xa2 c.37.1.9 (A:2-33,A:80- 87.5 0.2 1.4E-05 47.7 4.3 28 97-124 123-150 (712)
287 d1e8ca3 c.72.2.1 (A:104-337) U 87.5 0.32 2.3E-05 38.7 5.0 33 100-134 6-38 (234)
288 d1w1wa_ c.37.1.12 (A:) Smc hea 87.4 0.097 7.1E-06 45.6 1.9 45 178-223 351-398 (427)
289 d1s2ma1 c.37.1.19 (A:46-251) P 86.7 4.9 0.00036 31.0 12.0 18 99-116 38-55 (206)
290 d1tf5a3 c.37.1.19 (A:1-226,A:3 86.6 1.7 0.00013 35.8 9.2 68 97-166 93-161 (273)
291 d2mysa2 c.37.1.9 (A:4-33,A:80- 86.6 0.23 1.7E-05 47.8 4.3 28 97-124 121-148 (794)
292 d1f60a3 c.37.1.8 (A:2-240) Elo 85.8 0.24 1.7E-05 40.5 3.4 22 101-122 8-29 (239)
293 d1w7ja2 c.37.1.9 (A:63-792) My 85.0 0.31 2.2E-05 46.5 4.2 29 97-125 92-120 (730)
294 d2gc6a2 c.72.2.2 (A:1-296) Fol 84.1 0.35 2.5E-05 40.6 3.7 34 100-135 40-73 (296)
295 d1kk8a2 c.37.1.9 (A:1-28,A:77- 83.6 0.33 2.4E-05 46.7 3.7 28 97-124 119-146 (789)
296 d1r5ba3 c.37.1.8 (A:215-459) E 82.8 0.27 2E-05 40.3 2.4 20 102-121 27-46 (245)
297 d1hv8a1 c.37.1.19 (A:3-210) Pu 82.3 7.7 0.00056 29.8 11.3 19 101-119 44-62 (208)
298 d1j6ua3 c.72.2.1 (A:89-295) UD 81.1 0.74 5.4E-05 35.9 4.5 31 98-130 13-43 (207)
299 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 81.0 0.51 3.7E-05 43.1 3.9 33 102-134 27-63 (623)
300 d1gm5a3 c.37.1.19 (A:286-549) 80.8 2.6 0.00019 34.6 7.9 37 97-133 102-138 (264)
301 d1o5za2 c.72.2.2 (A:-2-293) Fo 80.4 0.62 4.5E-05 38.9 3.9 34 100-135 44-77 (296)
302 d1q0ua_ c.37.1.19 (A:) Probabl 79.6 0.72 5.2E-05 36.1 3.9 17 99-115 38-54 (209)
303 d1khba1 c.91.1.1 (A:260-622) C 76.0 1.3 9.5E-05 38.0 4.6 39 94-137 11-53 (363)
304 d1e69a_ c.37.1.12 (A:) Smc hea 73.6 0.66 4.8E-05 38.3 2.1 28 94-122 20-47 (308)
305 d1t6na_ c.37.1.19 (A:) Spliceo 72.9 2.4 0.00018 33.1 5.3 17 99-115 38-54 (207)
306 d1qdea_ c.37.1.19 (A:) Initiat 70.4 2.6 0.00019 33.1 5.0 19 98-116 46-64 (212)
307 d1f9va_ c.37.1.9 (A:) Kinesin 68.6 3.1 0.00022 35.2 5.4 38 69-116 63-100 (342)
308 d1r0ka2 c.2.1.3 (A:3-126,A:265 65.8 1.1 8E-05 33.7 1.6 34 99-135 2-36 (150)
309 d1sdma_ c.37.1.9 (A:) Kinesin 64.4 2.7 0.0002 36.0 4.2 16 101-116 77-92 (364)
310 d1wrba1 c.37.1.19 (A:164-401) 64.2 2.3 0.00017 34.0 3.5 26 98-123 57-84 (238)
311 d1rifa_ c.37.1.23 (A:) DNA hel 64.0 3 0.00022 34.3 4.3 42 102-146 131-173 (282)
312 d1bg2a_ c.37.1.9 (A:) Kinesin 63.9 4.4 0.00032 33.8 5.4 17 100-116 77-93 (323)
313 d1nkta3 c.37.1.19 (A:-15-225,A 61.7 6 0.00044 32.6 5.6 69 96-166 109-178 (288)
314 d2ncda_ c.37.1.9 (A:) Kinesin 61.2 3.3 0.00024 35.4 4.2 38 69-116 105-142 (368)
315 d1oywa2 c.37.1.19 (A:1-206) Re 60.8 1.2 8.5E-05 34.6 0.9 18 99-116 40-57 (206)
316 d1goja_ c.37.1.9 (A:) Kinesin 59.6 3.8 0.00028 34.8 4.3 17 100-116 81-97 (354)
317 d1t5la1 c.37.1.19 (A:2-414) Nu 58.2 7.1 0.00052 33.9 5.9 35 101-138 33-67 (413)
318 d2avda1 c.66.1.1 (A:44-262) CO 58.1 23 0.0017 27.4 8.7 131 99-242 60-194 (219)
319 d2j0sa1 c.37.1.19 (A:22-243) P 57.5 1.9 0.00014 34.2 1.7 17 99-115 54-70 (222)
320 d2zfia1 c.37.1.9 (A:4-352) Kin 56.3 4.3 0.00031 34.3 4.0 17 100-116 88-104 (349)
321 d2g9na1 c.37.1.19 (A:21-238) I 56.2 2 0.00015 34.0 1.6 18 99-116 49-66 (218)
322 d1x88a1 c.37.1.9 (A:18-362) Ki 54.3 5.6 0.00041 33.5 4.4 16 101-116 83-98 (345)
323 d1ry6a_ c.37.1.9 (A:) Kinesin 52.2 3.5 0.00025 34.6 2.7 17 100-116 86-102 (330)
324 d1veca_ c.37.1.19 (A:) DEAD bo 51.5 3.4 0.00025 32.1 2.3 17 99-115 40-56 (206)
325 d1q0qa2 c.2.1.3 (A:1-125,A:275 46.1 3.3 0.00024 30.9 1.3 33 101-136 3-36 (151)
326 d1w36b1 c.37.1.19 (B:1-485) Ex 44.3 6.8 0.0005 33.6 3.4 34 88-123 7-41 (485)
327 d1w25a1 c.23.1.1 (A:2-140) Res 44.0 22 0.0016 25.2 5.8 69 127-205 1-69 (139)
328 d1p3da1 c.5.1.1 (A:11-106) UDP 43.5 12 0.00089 25.1 4.0 71 97-191 6-76 (96)
329 d1v8ka_ c.37.1.9 (A:) Kinesin 41.9 6.2 0.00045 33.5 2.6 16 101-116 116-131 (362)
330 d1q1va_ a.159.4.1 (A:) DEK C-t 38.3 13 0.00097 23.6 3.2 54 29-85 13-66 (70)
331 d2o3fa1 a.4.1.20 (A:1-83) Puta 36.1 22 0.0016 23.1 4.2 74 1-82 1-77 (83)
332 d1u0sy_ c.23.1.1 (Y:) CheY pro 35.8 19 0.0014 24.6 4.2 70 127-205 1-70 (118)
333 d1mb3a_ c.23.1.1 (A:) Cell div 32.9 34 0.0024 23.3 5.2 68 128-205 2-69 (123)
334 d1jwyb_ c.37.1.8 (B:) Dynamin 31.6 23 0.0016 28.5 4.5 11 181-191 130-140 (306)
335 d2akab1 c.37.1.8 (B:6-304) Dyn 31.2 40 0.0029 26.7 6.1 11 181-191 124-134 (299)
336 d1sbya1 c.2.1.2 (A:1-254) Dros 29.6 1E+02 0.0073 23.8 8.3 87 98-191 4-93 (254)
337 d1vj0a2 c.2.1.1 (A:156-337) Hy 28.1 83 0.006 22.6 7.1 16 96-111 26-41 (182)
338 d1gc0a_ c.67.1.3 (A:) Methioni 27.6 36 0.0026 28.9 5.3 93 109-210 81-173 (392)
339 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 27.5 35 0.0026 22.3 4.2 67 101-191 3-69 (89)
340 d1kjwa2 c.37.1.1 (A:526-724) G 26.9 20 0.0015 27.2 3.2 22 100-124 10-31 (199)
341 d1lvaa3 a.4.5.35 (A:511-574) C 25.5 37 0.0027 20.7 3.7 27 32-58 7-33 (64)
342 d1zesa1 c.23.1.1 (A:3-123) Pho 25.4 39 0.0028 23.0 4.3 66 129-205 2-68 (121)
343 g1xew.1 c.37.1.12 (X:,Y:) Smc 25.2 25 0.0018 28.2 3.7 44 178-223 243-289 (329)
344 d1g3ma_ c.37.1.5 (A:) Estrogen 25.0 31 0.0022 27.6 4.2 29 93-123 30-58 (290)
345 d1cuka1 a.5.1.1 (A:156-203) DN 24.9 59 0.0043 18.6 4.3 27 32-58 3-29 (48)
346 d1krwa_ c.23.1.1 (A:) NTRC rec 24.8 95 0.0069 20.8 7.8 54 127-190 3-56 (123)
347 d1vcoa2 c.37.1.10 (A:11-282) C 24.7 57 0.0041 26.2 5.6 39 100-138 3-43 (272)
348 d2vo1a1 c.37.1.10 (A:1-273) CT 24.5 50 0.0036 26.5 5.2 38 101-138 3-42 (273)
349 d1wf3a1 c.37.1.8 (A:3-180) GTP 22.8 1.2E+02 0.0087 21.3 9.2 84 180-267 51-138 (178)
350 d1s1ma2 c.37.1.10 (A:1-266) CT 22.4 62 0.0045 25.8 5.3 118 100-219 4-173 (266)
351 d1c4oa1 c.37.1.19 (A:2-409) Nu 22.0 39 0.0028 28.8 4.4 36 100-138 29-64 (408)
352 d1pvda1 c.31.1.3 (A:182-360) P 20.9 50 0.0036 24.2 4.4 47 115-161 19-65 (179)
353 d1vi2a1 c.2.1.7 (A:107-288) Pu 20.8 46 0.0034 24.4 4.2 40 98-141 17-56 (182)
354 d1peya_ c.23.1.1 (A:) Sporulat 20.1 1E+02 0.0073 20.6 5.7 68 128-205 2-69 (119)
No 1
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=7.7e-44 Score=304.81 Aligned_cols=210 Identities=52% Similarity=0.835 Sum_probs=195.6
Q ss_pred cceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHH
Q psy2881 92 LIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAF 171 (302)
Q Consensus 92 i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (302)
++++-+++.+++++|||||||||++.+||..+...+.+|.+...|+||.++.+|++.|++.++++++....+.++...++
T Consensus 2 l~~~~~~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~ 81 (211)
T d2qy9a2 2 LNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIF 81 (211)
T ss_dssp CCCCSCTTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHH
T ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHH
Confidence 45666678999999999999999999999999988889999999999999999999999999999999888889888888
Q ss_pred HHHHHHHhCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHHHHHHHHhhcCCCeEEE
Q psy2881 172 NAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLII 251 (302)
Q Consensus 172 ~~la~al~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~~~~~f~~~~~~~~~i~ 251 (302)
+.+..+..++.|++|+||||+.+.+..++++|+++.+..+......+++.++|++++.+++.+.++..|+..++++++|+
T Consensus 82 ~~~~~a~~~~~d~ilIDTaGr~~~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lIl 161 (211)
T d2qy9a2 82 DAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITL 161 (211)
T ss_dssp HHHHHHHHTTCSEEEECCCCCGGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHcCCCEEEeccCCCccccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcchHHHHhhhhhccCCceEEE
Confidence 87777788999999999999999999999999999887665555578999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHhhhHhCCceEEEecCCCCCcCccCChHHHHHHhccC
Q psy2881 252 TKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLNQ 301 (302)
Q Consensus 252 tk~d~~~~~g~~~~~~~~~~~pv~~~~~gq~v~dl~~~~~~~~~~~l~~~ 301 (302)
||+||++++|.+++++.++++||.|+|+||+|+||++|+|++|+++|||.
T Consensus 162 TKlDe~~~~G~~l~~~~~~~~Pi~~i~~Gq~v~Dl~~~~~~~~~~~llg~ 211 (211)
T d2qy9a2 162 TKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFAR 211 (211)
T ss_dssp ECCTTCTTTTHHHHHHHHHCCCEEEEECSSSGGGEEECCHHHHHHHHHCC
T ss_pred eecCCCCCccHHHHHHHHHCCCEEEEeCCCCcccCccCCHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999984
No 2
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=7e-43 Score=299.65 Aligned_cols=210 Identities=54% Similarity=0.806 Sum_probs=195.4
Q ss_pred cceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHH
Q psy2881 92 LIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAF 171 (302)
Q Consensus 92 i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (302)
+++.-.++.+++++|||||||||++++||.++...+.+|.+.+.|++|.++.+|++.|++.++++++....+.++.....
T Consensus 4 l~~~~~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~ 83 (213)
T d1vmaa2 4 LNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAF 83 (213)
T ss_dssp CCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHH
T ss_pred CcCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeecccccchhHHHHHHhhhcCccccccCCCCcHHHHHH
Confidence 45666788999999999999999999999999888899999999999999999999999999999999888888887777
Q ss_pred HHHHHHHhCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHHHHHHHHhhcCCCeEEE
Q psy2881 172 NAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLII 251 (302)
Q Consensus 172 ~~la~al~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~~~~~f~~~~~~~~~i~ 251 (302)
...+.+...+.|+||+|+||+.+.+.++++++.++.+..+......+|+.++|++++.+++++.+...|+..++++++|+
T Consensus 84 ~~~~~~~~~~~d~ilIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI~ 163 (213)
T d1vmaa2 84 DAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIIL 163 (213)
T ss_dssp HHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHcCCCEEEEeccccccchHHHHHHHHHHHhhhhhccccccceeEEeeccccCcchhhhhhhhccccCCceEEE
Confidence 77777888999999999999999999999999999887665555568999999999999999999988888999999999
Q ss_pred ecCCCCCchhHHHHhhhHhCCceEEEecCCCCCcCccCChHHHHHHhccC
Q psy2881 252 TKLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLNQ 301 (302)
Q Consensus 252 tk~d~~~~~g~~~~~~~~~~~pv~~~~~gq~v~dl~~~~~~~~~~~l~~~ 301 (302)
||+||+.++|.+++++..+++||+|+|+||+|+||++|+|++|+++|||.
T Consensus 164 TKlDe~~~~G~~l~~~~~~~~Pi~~i~~Gq~v~Dl~~~~~~~l~~~llge 213 (213)
T d1vmaa2 164 TKLDGTAKGGITLAIARELGIPIKFIGVGEKAEDLRPFDPEAFVEVLLSE 213 (213)
T ss_dssp ECGGGCSCTTHHHHHHHHHCCCEEEEECSSSGGGEEECCHHHHHHHHTCC
T ss_pred ecccCCCcccHHHHHHHHHCCCEEEEeCCCCcccCccCCHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999984
No 3
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=100.00 E-value=1.6e-41 Score=290.19 Aligned_cols=203 Identities=48% Similarity=0.751 Sum_probs=189.6
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINI 176 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 176 (302)
.++.+++++||+||||||++.+||.++...+.+|.+...|++|.++.+|++.|++.++++++......++...+++.+..
T Consensus 4 ~~~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~ 83 (207)
T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQA 83 (207)
T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccccccchhhHhhcccccCceEEeccCCccHHHHHHHHHHH
Confidence 35789999999999999999999999998889999999999999999999999999999999888888988888887777
Q ss_pred HHhCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHHHHHHHHhhcCCCeEEEecCCC
Q psy2881 177 AQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDG 256 (302)
Q Consensus 177 al~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~~~~~f~~~~~~~~~i~tk~d~ 256 (302)
+..++.|+||+|+||+.+...++++++.++.+..+......+++.++|++++.+++.+.+...|++.++++++|+||+||
T Consensus 84 ~~~~~~d~ilIDTaGr~~~d~~l~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI~TKlDe 163 (207)
T d1okkd2 84 MKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDG 163 (207)
T ss_dssp HHHHTCSEEEECCCCCCTTCHHHHHHHHHHHHHHHHHCTTCCSEEEEEEETTBCTHHHHHHHHHHHHHCCSEEEEECTTS
T ss_pred HHHCCCCEEEcCccccchhhHHHHHHHHHHHHHhhhcccCCCceEEEEeecccCchHHHHHHHhhhccCCceEEEeccCC
Confidence 77889999999999999999999999999987765555567899999999999999999999999999999999999999
Q ss_pred CCchhHHHHhhhHhCCceEEEecCCCCCcCccCChHHHHHHhc
Q psy2881 257 TTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALL 299 (302)
Q Consensus 257 ~~~~g~~~~~~~~~~~pv~~~~~gq~v~dl~~~~~~~~~~~l~ 299 (302)
++++|.+++++..+++||+|+|+||+.+||++|+|++|+++||
T Consensus 164 t~~~G~~l~~~~~~~~Pi~~i~~Gq~p~Dl~~~~~~~l~~~ll 206 (207)
T d1okkd2 164 TAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALL 206 (207)
T ss_dssp SCCCTTHHHHHHHHCCCEEEEECSSSTTCEEECCHHHHHHHHT
T ss_pred CCCccHHHHHHHHHCCCEEEEeCCCChHhCccCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999997
No 4
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=100.00 E-value=2.5e-40 Score=283.28 Aligned_cols=201 Identities=39% Similarity=0.588 Sum_probs=179.2
Q ss_pred ecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHH
Q psy2881 95 KKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAI 174 (302)
Q Consensus 95 ~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (302)
.-+.+.+++|+||+||||||++.+||.+++..+.+|.+.+.|++|.++.+|++.|++.++++++......++.....+++
T Consensus 8 ~~k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~ 87 (211)
T d1j8yf2 8 PDKIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGV 87 (211)
T ss_dssp CSSSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccchhHHHHHhccccCcceeecccchhhhHHHHHHH
Confidence 33568999999999999999999999999988899999999999999999999999999999999888888888888888
Q ss_pred HHHHhCCCCeEEEcCCCCccch--HHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHHHHHHHHhhcCCCeEEEe
Q psy2881 175 NIAQKKNTDIVIVDTSGRLSTQ--SHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIIT 252 (302)
Q Consensus 175 a~al~~~~~llllDEP~d~~~~--~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~~~~~f~~~~~~~~~i~t 252 (302)
..+...+.+++|+|+||+.+.. ...++++.++.+. +.+++.++|++++.+++.+.+...|+...+++++|+|
T Consensus 88 ~~~~~~~~d~IlIDTaGr~~~~~~~~~~~el~~~~~~------~~~~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI~T 161 (211)
T d1j8yf2 88 EKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEA------IKPDEVTLVIDASIGQKAYDLASKFNQASKIGTIIIT 161 (211)
T ss_dssp HHHHHTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHH------HCCSEEEEEEEGGGGGGHHHHHHHHHHHCTTEEEEEE
T ss_pred HHhhccCCceEEEecCCcCccchhhHHHHHHHHHHhh------cCCceEEEEEecccCcchHHHHhhhhcccCcceEEEe
Confidence 8888899999999999965544 3456777777654 3478999999999999999999889889999999999
Q ss_pred cCCCCCchhHHHHhhhHhCCceEEEecCCCCCcCccCChHHHHHHhccC
Q psy2881 253 KLDGTTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLNQ 301 (302)
Q Consensus 253 k~d~~~~~g~~~~~~~~~~~pv~~~~~gq~v~dl~~~~~~~~~~~l~~~ 301 (302)
|+||+.++|.+++++.+.++|+.|+|+||+|+||++|+|++|+++|||.
T Consensus 162 KlDet~~~G~~l~~~~~~~lPi~~it~Gq~v~DL~~~~~~~l~~~ll~~ 210 (211)
T d1j8yf2 162 KMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARLHHH 210 (211)
T ss_dssp CTTSCSCHHHHHHHHHTTTCCEEEEECSSSTTCEEECCHHHHHHTTCTT
T ss_pred cccCCCcccHHHHHHHHHCcCEEEEeCCCCcccCccCCHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999984
No 5
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=100.00 E-value=1.1e-39 Score=279.00 Aligned_cols=199 Identities=38% Similarity=0.580 Sum_probs=179.5
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINI 176 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 176 (302)
+.+.+++|+|||||||||++++||.++...+.+|.+.+.|++|.++.+|++.|++.++++++......++....+.+...
T Consensus 8 ~~~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~~~~~ 87 (207)
T d1ls1a2 8 KDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEK 87 (207)
T ss_dssp CSSEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSCHHHHHHHHHHHHHHTCCEEECCTTCCHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccchHHHHHHHHHHhcCCccccccccchhhHHHHHHHHH
Confidence 35679999999999999999999999998889999999999999999999999999999999988888887777777667
Q ss_pred HHhCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHHHHHHHHhhcCCCeEEEecCCC
Q psy2881 177 AQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDG 256 (302)
Q Consensus 177 al~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~~~~~f~~~~~~~~~i~tk~d~ 256 (302)
+...+.|++|+|+||+.+.+...+++|.++.+.. .+++.++|++++.+++++.+++.|++.++++++|+||+|+
T Consensus 88 ~~~~~~d~vlIDTaGr~~~d~~~~~el~~~~~~~------~~~~~llv~~a~~~~~~~~~~~~f~~~~~~~~~I~TKlDe 161 (207)
T d1ls1a2 88 ARLEARDLILVDTAGRLQIDEPLMGELARLKEVL------GPDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDG 161 (207)
T ss_dssp HHHHTCCEEEEECCCCSSCCHHHHHHHHHHHHHH------CCSEEEEEEEGGGTHHHHHHHHHHHHHTCCCEEEEECGGG
T ss_pred HhhccCcceeecccccchhhhhhHHHHHHHHhhc------CCceEEEEeccccchhHHHHHHHHHhhCCCCeeEEeecCc
Confidence 7788999999999999999999999999987653 4789999999999999999999999999999999999999
Q ss_pred CCchhHHHHhhhHhCCceEEEecCCCCCcCccCChHHHHHHhccC
Q psy2881 257 TTKGGILAAIAKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLNQ 301 (302)
Q Consensus 257 ~~~~g~~~~~~~~~~~pv~~~~~gq~v~dl~~~~~~~~~~~l~~~ 301 (302)
+.++|.+++++..+++||+|+++||..|||++|+|++|+++|||.
T Consensus 162 ~~~~G~~l~~~~~~~~Pi~~i~~Gq~pedl~~~~~~~l~~~lLG~ 206 (207)
T d1ls1a2 162 DARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGM 206 (207)
T ss_dssp CSSCHHHHHHHHHHCCCEEEEC------CCEECCHHHHHHHHTTC
T ss_pred cccchHHHHHHHHHCCCEEEEeCCCChhhcccCCHHHHHHHHhCC
Confidence 999999999999999999999999977999999999999999983
No 6
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.94 E-value=1.9e-28 Score=211.62 Aligned_cols=137 Identities=18% Similarity=0.137 Sum_probs=105.4
Q ss_pred cCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHH-------HhcccCCC----C
Q psy2881 88 LEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLL-------ILGKYNDV----P 156 (302)
Q Consensus 88 ~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~-------~~~~~~~~----~ 156 (302)
+++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++......+..+ +..|...+ .
T Consensus 20 al~~isl~i~~Ge~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~r~~~ig~v~Q~~~l~~~~t 99 (230)
T d1l2ta_ 20 ALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLT 99 (230)
T ss_dssp EEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHHHHHEEEECTTCCCCTTSC
T ss_pred EEeceEEEEcCCCEEEEECCCCCCcchhhHhccCCCCCCcceeEECCEEcCcCChhhcchhhcceEEEEecchhhCcCcc
Confidence 689999999999999999999999999999999999999999999999987654433211 11111110 0
Q ss_pred e--------ee-cCCC------------------------------CCHHHHHHHHHHHHHhCCCCeEEEcCCC---Ccc
Q psy2881 157 V--------IS-EKKI------------------------------TDPAAIAFNAINIAQKKNTDIVIVDTSG---RLS 194 (302)
Q Consensus 157 ~--------~~-~~~~------------------------------~~~~~~~~~~la~al~~~~~llllDEP~---d~~ 194 (302)
+ .. .... ..-.+..+-+||||++.+|++||+|||| |+.
T Consensus 100 v~eni~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~p~~LSGGqkQRvaIAraL~~~P~lLllDEPTs~LD~~ 179 (230)
T d1l2ta_ 100 ALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSK 179 (230)
T ss_dssp HHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHTTCCGGGTTCCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCHH
T ss_pred HHHHHhHHHHHhccCCCCHHHHHHHHHHHHHhhchhhhhhcCChhhCCHHHHHHHHHHhhhhcCCCEEEecCCccccCHH
Confidence 0 00 0000 1112223334999999999999999998 999
Q ss_pred chHHHHHHHHHHHHHhchhhccccceeehh
Q psy2881 195 TQSHLMRELKKIKKVIEKKIFELPYEIFLI 224 (302)
Q Consensus 195 ~~~~l~~~L~~l~~~~~~~i~~~~hd~~lv 224 (302)
+...+++.|+++.+..+.|++++|||+..+
T Consensus 180 ~~~~i~~~l~~l~~~~g~tii~vTHd~~~a 209 (230)
T d1l2ta_ 180 TGEKIMQLLKKLNEEDGKTVVVVTHDINVA 209 (230)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHhhCCEEEEECCCHHHH
Confidence 999999999999988899999999997654
No 7
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=6.4e-28 Score=208.37 Aligned_cols=140 Identities=11% Similarity=0.108 Sum_probs=103.6
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHH-HHHHhcccCC----------C
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYE-QLLILGKYND----------V 155 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~-ql~~~~~~~~----------~ 155 (302)
.+++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++......+ .+.+..|... +
T Consensus 14 ~~l~~isl~i~~Gei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~~tv~eni 93 (232)
T d2awna2 14 VVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENM 93 (232)
T ss_dssp EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCCTTSCGGGTCEEEECSSCCC----------
T ss_pred EEEeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEECCCCchhhceeeeeccccccccchhHHHHH
Confidence 4789999999999999999999999999999999999999999999999875332211 1111111111 0
Q ss_pred Ce--eec-CCCCCHHHHHHH--------------------------HHHHHHhCCCCeEEEcCCC---CccchHHHHHHH
Q psy2881 156 PV--ISE-KKITDPAAIAFN--------------------------AINIAQKKNTDIVIVDTSG---RLSTQSHLMREL 203 (302)
Q Consensus 156 ~~--~~~-~~~~~~~~~~~~--------------------------~la~al~~~~~llllDEP~---d~~~~~~l~~~L 203 (302)
.+ ... ....+..+.+.+ +||||++.+|++||+|||+ |+.+...+++.|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSGGqkQRvaiAraL~~~P~illlDEPts~LD~~~~~~i~~~l 173 (232)
T d2awna2 94 SFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEI 173 (232)
T ss_dssp -----------CHHHHHHHHHHHHC---------------------CHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHH
Confidence 00 000 000111111111 2999999999999999998 999999999999
Q ss_pred HHHHHHhchhhccccceeehhhc
Q psy2881 204 KKIKKVIEKKIFELPYEIFLIID 226 (302)
Q Consensus 204 ~~l~~~~~~~i~~~~hd~~lvl~ 226 (302)
+++.+..|.|++++|||+..+..
T Consensus 174 ~~l~~~~g~tii~vTHd~~~a~~ 196 (232)
T d2awna2 174 SRLHKRLGRTMIYVTHDQVEAMT 196 (232)
T ss_dssp HHHHHHSCCEEEEEESCHHHHHH
T ss_pred HHHHHhcCCEEEEEeCCHHHHHH
Confidence 99998889999999998776544
No 8
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.94 E-value=5.8e-28 Score=209.36 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=103.7
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHH-HHHHhcccCCC----------
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYE-QLLILGKYNDV---------- 155 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~-ql~~~~~~~~~---------- 155 (302)
.+++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.|+......+ .+.+..|..++
T Consensus 20 ~al~~vsl~v~~Ge~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~enl 99 (239)
T d1v43a3 20 TAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENI 99 (239)
T ss_dssp EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGGTEEEEEC------CCCHHHHH
T ss_pred EEEcceeEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCEEEEcceecccCCcccceEEEEeechhhcccchHHHHH
Confidence 4789999999999999999999999999999999999999999999999875422211 01111111100
Q ss_pred CeeecCCCCCHH-----------------------------HHHHHHHHHHHhCCCCeEEEcCCC---CccchHHHHHHH
Q psy2881 156 PVISEKKITDPA-----------------------------AIAFNAINIAQKKNTDIVIVDTSG---RLSTQSHLMREL 203 (302)
Q Consensus 156 ~~~~~~~~~~~~-----------------------------~~~~~~la~al~~~~~llllDEP~---d~~~~~~l~~~L 203 (302)
.+.....+.+.. +..+-+||||++.+|++||+|||+ |+.+...+++.|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGGq~QRvaiAraL~~~P~iLllDEPts~LD~~~~~~i~~ll 179 (239)
T d1v43a3 100 AFPLKIKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEI 179 (239)
T ss_dssp HTTCC--CCCHHHHHHHHHHHHHHTTCGGGTTSCTTTCCSSCHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHhhhccCCCceeecCCcccCCHHHHHHHHHHH
Confidence 000000011111 111223999999999999999998 999999999999
Q ss_pred HHHHHHhchhhccccceeehhhc
Q psy2881 204 KKIKKVIEKKIFELPYEIFLIID 226 (302)
Q Consensus 204 ~~l~~~~~~~i~~~~hd~~lvl~ 226 (302)
.++.+..+.|++++|||+..+..
T Consensus 180 ~~l~~~~g~tii~vTHd~~~a~~ 202 (239)
T d1v43a3 180 KKLQQKLKVTTIYVTHDQVEAMT 202 (239)
T ss_dssp HHHHHHHTCEEEEEESCHHHHHH
T ss_pred HHHHHhcCCeEEEEeCCHHHHHH
Confidence 99998889999999999876544
No 9
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=99.94 E-value=7e-28 Score=207.59 Aligned_cols=139 Identities=15% Similarity=0.106 Sum_probs=105.0
Q ss_pred cCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHH-HHHHhcccCC------------
Q psy2881 88 LEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYE-QLLILGKYND------------ 154 (302)
Q Consensus 88 ~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~-ql~~~~~~~~------------ 154 (302)
+++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.|+......+ .+.+..|...
T Consensus 15 aL~~vs~~i~~Ge~~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~~G~~i~~~~~~~r~ig~v~Q~~~l~~~~tV~enl~ 94 (229)
T d3d31a2 15 SLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLE 94 (229)
T ss_dssp EEEEEEEEECTTCEEEEECCCTHHHHHHHHHHHTSSCCSEEEEEETTEECTTSCHHHHTCEEECTTCCCCTTSCHHHHHH
T ss_pred EEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCcCCCCCEEEEccEeccccchhHhcceeeccccccCccccHHHHHH
Confidence 688999999999999999999999999999999999999999999999986433221 1111111111
Q ss_pred ----------------------CCeeec--CCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---CccchHHHHHHHHHHH
Q psy2881 155 ----------------------VPVISE--KKITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQSHLMRELKKIK 207 (302)
Q Consensus 155 ----------------------~~~~~~--~~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~~~l~~~L~~l~ 207 (302)
+.-+.. .....-.+..+-+||||++.+|++||+|||+ |+.+...+++.|+++.
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGG~~QRvaiAraL~~~P~iLllDEPts~LD~~~~~~i~~~l~~l~ 174 (229)
T d3d31a2 95 FGMRMKKIKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLH 174 (229)
T ss_dssp HHHHHHCCCCHHHHHHHHHHTTCTTTTTSCGGGSCHHHHHHHHHHHHTTSCCSEEEEESSSTTSCHHHHHHHHHHHHHHH
T ss_pred HHHhhccccHHHHHHHHHHHhcchhhHhCChhhCCHHHhcchhhhhhhhccCCceeecCCCcCCCHHHHHHHHHHHHHHH
Confidence 000000 0001112233334999999999999999998 9999999999999999
Q ss_pred HHhchhhccccceeehhhc
Q psy2881 208 KVIEKKIFELPYEIFLIID 226 (302)
Q Consensus 208 ~~~~~~i~~~~hd~~lvl~ 226 (302)
+..|.|++++|||+..+..
T Consensus 175 ~~~g~tii~vtHd~~~~~~ 193 (229)
T d3d31a2 175 KKNKLTVLHITHDQTEARI 193 (229)
T ss_dssp HHTTCEEEEEESCHHHHHH
T ss_pred hcCCcEEEEEcCCHHHHHH
Confidence 8889999999998776544
No 10
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=6.9e-28 Score=209.19 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=106.6
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHH------HHHhcccCCC-C---
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQ------LLILGKYNDV-P--- 156 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~q------l~~~~~~~~~-~--- 156 (302)
.+++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.|+......+. +.+..|..++ +
T Consensus 19 ~al~~vsl~i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~~g~~i~~~~~~~~~~~rr~ig~VfQ~~~l~~~~t 98 (240)
T d3dhwc1 19 QALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRT 98 (240)
T ss_dssp EEEEEEEEEECSSCEEEEEESTTSSHHHHHHHHTTSSCCSEEEEEETTEEECTTCHHHHHHHHHHEEECCSSCCCCTTSB
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHcCCccccCCceEEcCeEeeeCChhhhhhhhccccccccccccCCCcc
Confidence 36899999999999999999999999999999999999999999999999875443321 1111222110 0
Q ss_pred e--------ee-cCCCCCH--------------------------HHHHHHHHHHHHhCCCCeEEEcCCC---CccchHH
Q psy2881 157 V--------IS-EKKITDP--------------------------AAIAFNAINIAQKKNTDIVIVDTSG---RLSTQSH 198 (302)
Q Consensus 157 ~--------~~-~~~~~~~--------------------------~~~~~~~la~al~~~~~llllDEP~---d~~~~~~ 198 (302)
+ .. .....+. .+..+-+||||++.+|++||+|||+ |+.+...
T Consensus 99 v~eni~~~l~~~~~~~~~~~~~v~~~L~~vgL~~~~~~~~~~LSGG~~QRvaiAraL~~~P~lLllDEPt~~LD~~~~~~ 178 (240)
T d3dhwc1 99 VFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRS 178 (240)
T ss_dssp HHHHHHHHHHTTTCCTTHHHHHHHHHHHHHSTTTTTSSCBSCCCHHHHHHHHHHHHHHTCCSEEEEESGGGSSCHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHhhhhccCCCeEEeccccccCCHHHhhH
Confidence 0 00 0000111 1111223999999999999999997 9999999
Q ss_pred HHHHHHHHHHHhchhhccccceeehhhcC
Q psy2881 199 LMRELKKIKKVIEKKIFELPYEIFLIIDG 227 (302)
Q Consensus 199 l~~~L~~l~~~~~~~i~~~~hd~~lvl~~ 227 (302)
+++.|+++.++.|.|++++|||+..+...
T Consensus 179 i~~~l~~l~~~~g~tvi~vTHdl~~~~~~ 207 (240)
T d3dhwc1 179 ILELLKDINRRLGLTILLITHEMDVVKRI 207 (240)
T ss_dssp HHHHHHHHHHHHCCEEEEEBSCHHHHHHH
T ss_pred HHHHHHHHHhccCCEEEEEcCCHHHHHHh
Confidence 99999999998899999999998765443
No 11
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=99.93 E-value=1.3e-27 Score=208.28 Aligned_cols=141 Identities=17% Similarity=0.218 Sum_probs=104.5
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHH----HhcccCCC----Ce-
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLL----ILGKYNDV----PV- 157 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~----~~~~~~~~----~~- 157 (302)
.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.+.|.|+.........+ +..+...+ .+
T Consensus 20 ~al~~vs~~i~~Gei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~r~gi~~~~q~~~l~~~ltv~ 99 (240)
T d1ji0a_ 20 HAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVY 99 (240)
T ss_dssp EEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHTTEEEECSSCCCCTTSBHH
T ss_pred EEEeeeeEEECCCCEEEEECCCCCcHHHHHHHHhCCCCCCccEEEecccccccccHHHHHHhcccccCcccccCCcccHH
Confidence 4789999999999999999999999999999999999999999999999986544321111 11111110 00
Q ss_pred ----eec--CCCCC----------------------------HHHHHHHHHHHHHhCCCCeEEEcCCC---CccchHHHH
Q psy2881 158 ----ISE--KKITD----------------------------PAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQSHLM 200 (302)
Q Consensus 158 ----~~~--~~~~~----------------------------~~~~~~~~la~al~~~~~llllDEP~---d~~~~~~l~ 200 (302)
+.. ..... -.+..+-+||||++.+|++||+|||+ |+....+++
T Consensus 100 en~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~LSGG~~Qrv~iAraL~~~P~lLllDEPt~gLD~~~~~~i~ 179 (240)
T d1ji0a_ 100 ENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVF 179 (240)
T ss_dssp HHHHGGGTTCCCSSHHHHHHHHHHHHCHHHHTTTTSBSSSSCHHHHHHHHHHHHHTTCCSEEEEECTTTTCCHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhChHHHHhCchhhCCHHHHHHHHHHHHHHhCCCEeeecCCCcCCCHHHHHHHH
Confidence 000 00001 11111123999999999999999998 999999999
Q ss_pred HHHHHHHHHhchhhccccceeehhhcCC
Q psy2881 201 RELKKIKKVIEKKIFELPYEIFLIIDGN 228 (302)
Q Consensus 201 ~~L~~l~~~~~~~i~~~~hd~~lvl~~~ 228 (302)
+.|+++++. |.++++++||+..+...+
T Consensus 180 ~~i~~l~~~-g~til~~tH~l~~~~~~~ 206 (240)
T d1ji0a_ 180 EVIQKINQE-GTTILLVEQNALGALKVA 206 (240)
T ss_dssp HHHHHHHHT-TCCEEEEESCHHHHHHHC
T ss_pred HHHHHHHhC-CCEEEEEeCCHHHHHHhC
Confidence 999999775 899999999887665533
No 12
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=99.93 E-value=6.2e-28 Score=209.48 Aligned_cols=141 Identities=11% Similarity=0.150 Sum_probs=105.1
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChh-------------------------
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAA------------------------- 141 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~------------------------- 141 (302)
.+++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++....
T Consensus 17 ~al~~vsl~i~~Ge~~~liG~sGaGKSTll~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~~~r~ig~v~Q~~~L~~~l 96 (240)
T d1g2912 17 TAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHM 96 (240)
T ss_dssp EEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEECCGGGSSEEEECSCCCCCTTS
T ss_pred EEEcceeeEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEEecccchhhhcccccccceecccchhhcchh
Confidence 4789999999999999999999999999999999999999999999997753211
Q ss_pred -HHHHHHHhc------------------ccCCCCeeecC--CCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---CccchH
Q psy2881 142 -AYEQLLILG------------------KYNDVPVISEK--KITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQS 197 (302)
Q Consensus 142 -~~~ql~~~~------------------~~~~~~~~~~~--~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~~ 197 (302)
..+++.... +..++.-+... ....-.+..+-+||||++.+|++||+|||+ |+.+..
T Consensus 97 tV~eni~~~~~~~~~~~~e~~~~v~~~l~~~~l~~~~~~~p~~LSGGqkQRv~IAraL~~~P~iLllDEPt~~LD~~~~~ 176 (240)
T d1g2912 97 TVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRV 176 (240)
T ss_dssp CHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTCGGGTTCCGGGSCHHHHHHHHHHHHHHTCCSEEEEECTTTTSCHHHHH
T ss_pred hhhHhhhhhHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCcccCHHHHH
Confidence 111111110 01111100000 001122333344999999999999999998 999999
Q ss_pred HHHHHHHHHHHHhchhhccccceeehhhcC
Q psy2881 198 HLMRELKKIKKVIEKKIFELPYEIFLIIDG 227 (302)
Q Consensus 198 ~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~ 227 (302)
.+++.|.++.++.|.|++++|||+..+...
T Consensus 177 ~i~~~l~~l~~~~g~tvi~vTHd~~~~~~~ 206 (240)
T d1g2912 177 RMRAELKKLQRQLGVTTIYVTHDQVEAMTM 206 (240)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhccCCEEEEEcCCHHHHHHh
Confidence 999999999988899999999998776543
No 13
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.93 E-value=9.1e-28 Score=208.32 Aligned_cols=142 Identities=13% Similarity=0.075 Sum_probs=105.3
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCCh-------------------------h
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRA-------------------------A 141 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~-------------------------~ 141 (302)
.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 19 ~aL~~vsl~i~~Ge~~~iiG~sGsGKSTll~~i~gl~~p~~G~I~~~g~~i~~~~~~~~~~~rr~ig~vfQ~~~L~p~lt 98 (242)
T d1oxxk2 19 VALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLT 98 (242)
T ss_dssp EEEEEEEEEECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSCGGGSCEEEEETTSCCCTTSC
T ss_pred EEEeceEEEECCCCEEEEECCCCCcHHHHHHHHHcCcCCCCceEEECCEEeecCchhhcchhhccceEEecccccccccc
Confidence 478999999999999999999999999999999999999999999999875311 1
Q ss_pred HHHHHHHh------------------cccCCCCeeecC--CCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---CccchHH
Q psy2881 142 AYEQLLIL------------------GKYNDVPVISEK--KITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQSH 198 (302)
Q Consensus 142 ~~~ql~~~------------------~~~~~~~~~~~~--~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~~~ 198 (302)
..+.+... .+..++.-+... ....-.+..+-+||||++.+|++||+|||+ |+.+...
T Consensus 99 v~eni~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~p~~LSGGqkQRvaiARaL~~~P~llllDEPt~~LD~~~~~~ 178 (242)
T d1oxxk2 99 AFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDS 178 (242)
T ss_dssp HHHHHHGGGTTSSCCHHHHHHHHHHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCGGGHHH
T ss_pred HHHHhhhhhHhhcCCHHHHHHHHHHHHhhcChHhhhhCChhhCCHHHHhHHHHHhHHhhcccceeecCCccCCCHHHHHH
Confidence 11111111 011111000000 001112223334999999999999999998 9999999
Q ss_pred HHHHHHHHHHHhchhhccccceeehhhcCC
Q psy2881 199 LMRELKKIKKVIEKKIFELPYEIFLIIDGN 228 (302)
Q Consensus 199 l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~ 228 (302)
+++.|+++.++.+.|++++|||+..+...+
T Consensus 179 i~~~i~~l~~~~g~tvi~vTHd~~~~~~~~ 208 (242)
T d1oxxk2 179 ARALVKEVQSRLGVTLLVVSHDPADIFAIA 208 (242)
T ss_dssp HHHHHHHHHHHHCCEEEEEESCHHHHHHHC
T ss_pred HHHHHHHHHhccCCEEEEEECCHHHHHHhC
Confidence 999999999888999999999987765543
No 14
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.92 E-value=1.6e-26 Score=203.12 Aligned_cols=141 Identities=15% Similarity=0.163 Sum_probs=105.8
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHH----hcccCC----CCe-
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLI----LGKYND----VPV- 157 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~----~~~~~~----~~~- 157 (302)
.++++|||++++||+++|+||||||||||+++|+|+++|++|+|.+.|.|+......+..+. ..|... ..+
T Consensus 18 ~aL~~vs~~v~~Gei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~gi~~v~Q~~~~~~~ltv~ 97 (254)
T d1g6ha_ 18 KALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVL 97 (254)
T ss_dssp EEEEEECCEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHTEEECCCCCGGGGGSBHH
T ss_pred EEEcceEEEECCCCEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECCEeccchhHHHHHHhcCCccCCccccCCCCeee
Confidence 47899999999999999999999999999999999999999999999999864443322111 111110 000
Q ss_pred ----e---------------ecCCCCC----------------------------HHHHHHHHHHHHHhCCCCeEEEcCC
Q psy2881 158 ----I---------------SEKKITD----------------------------PAAIAFNAINIAQKKNTDIVIVDTS 190 (302)
Q Consensus 158 ----~---------------~~~~~~~----------------------------~~~~~~~~la~al~~~~~llllDEP 190 (302)
+ ......+ -.+..+-+||||++.+|++||+|||
T Consensus 98 enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~Qrv~iAraL~~~P~llilDEP 177 (254)
T d1g6ha_ 98 ENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEP 177 (254)
T ss_dssp HHHHGGGTSTTSCHHHHHHHCSSCCCCHHHHHHHHHHHHHTTCGGGTTSBGGGSCHHHHHHHHHHHHHHTCCSEEEEEST
T ss_pred eeeeehhhhccccchhhhhhhcccccHHHHHHHHHHHHHhcCcchhccCchhhCCcHHHHHHHHHHHHHhCcCchhhcCC
Confidence 0 0000001 1111122399999999999999999
Q ss_pred C---CccchHHHHHHHHHHHHHhchhhccccceeehhhcCC
Q psy2881 191 G---RLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGN 228 (302)
Q Consensus 191 ~---d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~ 228 (302)
+ |+.....+++.|+++++ .|.++++++||+..+...+
T Consensus 178 t~gLD~~~~~~i~~~i~~l~~-~g~til~vsHdl~~~~~~~ 217 (254)
T d1g6ha_ 178 IAGVAPGLAHDIFNHVLELKA-KGITFLIIEHRLDIVLNYI 217 (254)
T ss_dssp TTTCCHHHHHHHHHHHHHHHH-TTCEEEEECSCCSTTGGGC
T ss_pred cccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCcHHHHHHhC
Confidence 8 99999999999999965 4899999999999887765
No 15
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=99.92 E-value=2.5e-26 Score=199.74 Aligned_cols=141 Identities=15% Similarity=0.098 Sum_probs=105.0
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHH--HHHHHhcccCCC---------
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAY--EQLLILGKYNDV--------- 155 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~--~ql~~~~~~~~~--------- 155 (302)
++++++||++.+|++++|+||||||||||+++|+|+++|++|+|.+.|.|+...... ..+.+..+..++
T Consensus 16 ~vl~~vs~~v~~Gei~glvG~nGaGKSTLl~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~i~~vpq~~~~~~~ltv~e~ 95 (238)
T d1vpla_ 16 EILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEY 95 (238)
T ss_dssp EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTCHHHHHTTEEEECTTCCCCTTSBHHHH
T ss_pred EEEccceeEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECcEecccChHHHHhhEeEeeeccccCCCccHHHH
Confidence 589999999999999999999999999999999999999999999999987543211 001111111100
Q ss_pred ----------------------------Ceee--cCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---CccchHHHHHH
Q psy2881 156 ----------------------------PVIS--EKKITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQSHLMRE 202 (302)
Q Consensus 156 ----------------------------~~~~--~~~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~~~l~~~ 202 (302)
.-.. ........+..+-+||+|++.+|+++|+|||+ |+.....+++.
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lSgG~~qrv~iA~al~~~p~illLDEPt~gLD~~~~~~i~~~ 175 (238)
T d1vpla_ 96 LRFVAGFYASSSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKI 175 (238)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHCCGGGGGSBGGGCCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHhCCCHHHHhhhhhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHH
Confidence 0000 00001112222334999999999999999997 99999999999
Q ss_pred HHHHHHHhchhhccccceeehhhcCC
Q psy2881 203 LKKIKKVIEKKIFELPYEIFLIIDGN 228 (302)
Q Consensus 203 L~~l~~~~~~~i~~~~hd~~lvl~~~ 228 (302)
++++.+. |.+++++|||+..+...+
T Consensus 176 i~~~~~~-g~tii~~tH~l~~~~~~~ 200 (238)
T d1vpla_ 176 LKQASQE-GLTILVSSHNMLEVEFLC 200 (238)
T ss_dssp HHHHHHT-TCEEEEEECCHHHHTTTC
T ss_pred HHHHHhc-CCEEEEEeCCHHHHHHhC
Confidence 9998765 899999999988877655
No 16
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=99.91 E-value=4.1e-26 Score=200.56 Aligned_cols=141 Identities=14% Similarity=0.117 Sum_probs=103.2
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChh---------HHHHHHHh-------c
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAA---------AYEQLLIL-------G 150 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~---------~~~ql~~~-------~ 150 (302)
.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... .......+ .
T Consensus 16 ~al~~vs~~i~~GEi~~iiG~sGsGKSTLl~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~~~~~~~~~~~r~~ig~vf 95 (258)
T d1b0ua_ 16 EVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVF 95 (258)
T ss_dssp EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEECCEEECTTSSEEESCHHHHHHHHHHEEEEC
T ss_pred EEEcceeeEEcCCCEEEEECCCCCcHHHHHHHHHcCccCCCCCEEECCEEeccCCccchhcccccHhHHHHHhcceEEEE
Confidence 5789999999999999999999999999999999999999999999998864210 00011111 1
Q ss_pred ccCC--------------------------------------CCe-eec--CCCCCHHHHHHHHHHHHHhCCCCeEEEcC
Q psy2881 151 KYND--------------------------------------VPV-ISE--KKITDPAAIAFNAINIAQKKNTDIVIVDT 189 (302)
Q Consensus 151 ~~~~--------------------------------------~~~-~~~--~~~~~~~~~~~~~la~al~~~~~llllDE 189 (302)
|... +.- ... .....-.+..+-+||||++.+|++||+||
T Consensus 96 Q~~~l~~~~tv~env~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~p~~LSGG~~QRv~iAraL~~~P~llilDE 175 (258)
T d1b0ua_ 96 QHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDE 175 (258)
T ss_dssp SSCCCCTTSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCHHHHTSCGGGSCHHHHHHHHHHHHHHTCCSEEEEES
T ss_pred echhhccchhcchhhhhhHHHhcCCCHHHHHHHHHHHHHHcCCchhhhccCcccccHHHHHHHHHHHHHhcCCCEEEecc
Confidence 1110 000 000 00011122222349999999999999999
Q ss_pred CC---CccchHHHHHHHHHHHHHhchhhccccceeehhhcCC
Q psy2881 190 SG---RLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGN 228 (302)
Q Consensus 190 P~---d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~ 228 (302)
|| |+.+..++++.|+++++. |.|++++|||+..+...+
T Consensus 176 PT~gLD~~~~~~i~~ll~~l~~~-g~til~vtHdl~~~~~~a 216 (258)
T d1b0ua_ 176 PTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVS 216 (258)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHC
T ss_pred ccccCCHHHHHHHHHhhhhhccc-CCceEEEeCCHHHHHHhC
Confidence 98 999999999999999875 899999999988766543
No 17
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.91 E-value=1.3e-25 Score=194.29 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=99.6
Q ss_pred CcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHH-HHHHhccc-----------------
Q psy2881 91 PLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYE-QLLILGKY----------------- 152 (302)
Q Consensus 91 ~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~-ql~~~~~~----------------- 152 (302)
|+||++. +++++|+||||||||||+++|+|+++|++|+|.++|.|+......+ .+.+..|.
T Consensus 17 ~vs~~~~-~e~~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~i~~~~~~~r~ig~v~Q~~~l~~~ltV~enl~~~l 95 (240)
T d2onka1 17 NVDFEMG-RDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGL 95 (240)
T ss_dssp EEEEEEC-SSEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCTTTSCCBCCCSSCCCCTTSCHHHHHHTTC
T ss_pred EEEEEeC-CEEEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEECCcCCHHHcCceeeccchhhcccchhhHhhhhhh
Confidence 6788885 5899999999999999999999999999999999999875432210 11111111
Q ss_pred ------------------CCCCeeecCC--CCCHHHHHHHHHHHHHhCCCCeEEEcCCC---CccchHHHHHHHHHHHHH
Q psy2881 153 ------------------NDVPVISEKK--ITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQSHLMRELKKIKKV 209 (302)
Q Consensus 153 ------------------~~~~~~~~~~--~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~~~l~~~L~~l~~~ 209 (302)
.++.-+.... ...-.+..+-+||||++.+|+++|+|||+ |+.++..+++.++++++.
T Consensus 96 ~~~~~~~~~~~v~~~l~~~gl~~~~~~~~~~LSGG~kQRvaiAral~~~P~illlDEPts~LD~~~~~~i~~~i~~l~~~ 175 (240)
T d2onka1 96 RNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQRE 175 (240)
T ss_dssp TTSCHHHHHHHHHHHHHTTTCTTTTTCCGGGSCHHHHHHHHHHHHHTTCCSSBEEESTTSSCCHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhcCcHhhhhCChhhCCHHHHHHHHHHHHHhccCCceEecCccccCCHHHHHHHHHHHHHHHHh
Confidence 1111000000 00112222234999999999999999998 999999999999999988
Q ss_pred hchhhccccceeehhhcCC
Q psy2881 210 IEKKIFELPYEIFLIIDGN 228 (302)
Q Consensus 210 ~~~~i~~~~hd~~lvl~~~ 228 (302)
.+.+++++|||+..+...+
T Consensus 176 ~g~tvi~vtHd~~~~~~~a 194 (240)
T d2onka1 176 FDVPILHVTHDLIEAAMLA 194 (240)
T ss_dssp HTCCEEEEESCHHHHHHHC
T ss_pred cCCeEEEEeCCHHHHHHhC
Confidence 8999999999877665533
No 18
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=2e-25 Score=195.54 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=104.1
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHH---HHHHHhcccCCC--------
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAY---EQLLILGKYNDV-------- 155 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~---~ql~~~~~~~~~-------- 155 (302)
.+++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.|+...... .++.+..|...+
T Consensus 28 ~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~en 107 (251)
T d1jj7a_ 28 LVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQEN 107 (251)
T ss_dssp CSEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHHHHHEEEECSSCCCCSSBHHHH
T ss_pred EeEeceEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEecchhhhHHHHHHhhhccccccccCcchhhh
Confidence 478999999999999999999999999999999999999999999999887432221 111111111100
Q ss_pred ----------------------------------Cee--ecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---Cccch
Q psy2881 156 ----------------------------------PVI--SEKKITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQ 196 (302)
Q Consensus 156 ----------------------------------~~~--~~~~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~ 196 (302)
... .......-.+..+-+||||++++|+++|+|||| |+.+.
T Consensus 108 i~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~i~~~~~~LSGGqkQRvaiARal~~~p~ililDEpTs~LD~~~~ 187 (251)
T d1jj7a_ 108 IAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQ 187 (251)
T ss_dssp HHCSCSSCCCHHHHHHHHHHHTCHHHHHTSTTGGGCBCCSSCSSSCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHH
T ss_pred hhhhhcccchHHHHHHHHHHHHHHHHHHhccccchhhHhccCccCChhHceEEEEeeccccCCcEEEecCcCcccChhhH
Confidence 000 000112233444445999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHhchhhccccceeehh
Q psy2881 197 SHLMRELKKIKKVIEKKIFELPYEIFLI 224 (302)
Q Consensus 197 ~~l~~~L~~l~~~~~~~i~~~~hd~~lv 224 (302)
..+++.|.++.+..++|++++|||+..+
T Consensus 188 ~~i~~~l~~l~~~~~~Tvi~itH~l~~~ 215 (251)
T d1jj7a_ 188 LQVEQLLYESPERYSRSVLLITQHLSLV 215 (251)
T ss_dssp HHHHHHHHTCGGGGGCEEEEECSCHHHH
T ss_pred HHHHHHHHHHhhhcCCEEEEEeCCHHHH
Confidence 9999999998877789999999987654
No 19
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.91 E-value=5.2e-25 Score=186.85 Aligned_cols=136 Identities=18% Similarity=0.219 Sum_probs=99.7
Q ss_pred hccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCCh-----------------hHHHHHHH
Q psy2881 86 KSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRA-----------------AAYEQLLI 148 (302)
Q Consensus 86 ~~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~-----------------~~~~ql~~ 148 (302)
+++++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.+. ...+.+..
T Consensus 14 ~~vl~~is~~i~~Gei~~l~G~NGsGKSTLl~~i~gl~~p~~G~I~~~g~~i~~~~~~i~~~~~~~~~~~~~t~~~~l~~ 93 (200)
T d1sgwa_ 14 KPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPRKISVEDYLKA 93 (200)
T ss_dssp SEEEEEEEEEEETTCCEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGGGGGEEEECSSCCCCTTSBHHHHHHH
T ss_pred CeEEeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccccCCCEEEECCEehhHhcCcEEEEeecccCCCCcCHHHHHHH
Confidence 3689999999999999999999999999999999999999999999999775321 11222222
Q ss_pred hcccCCCC--------------ee---ecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---CccchHHHHHHHHHHHH
Q psy2881 149 LGKYNDVP--------------VI---SEKKITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQSHLMRELKKIKK 208 (302)
Q Consensus 149 ~~~~~~~~--------------~~---~~~~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~~~l~~~L~~l~~ 208 (302)
+....+.. .. .........+..+-.||+|++.+|+++|+|||+ |+.+...+++.|.++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ia~al~~~~~llllDEPt~gLD~~~~~~i~~~l~~~~~ 173 (200)
T d1sgwa_ 94 VASLYGVKVNKNEIMDALESVEVLDLKKKLGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILK 173 (200)
T ss_dssp HHHHTTCCCCHHHHHHHHHHTTCCCTTSBGGGSCHHHHHHHHHHHHTTSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHH
T ss_pred HHHhcCCccCHHHHHHHHHHcCCcccccccCcCCCcHHHHHHHHHHHhcCCCEEEEcCcccccCHHHHHHHHHHHHHHHh
Confidence 21111110 00 001112233444455999999999999999997 99999999999999988
Q ss_pred Hhchhhcccccee
Q psy2881 209 VIEKKIFELPYEI 221 (302)
Q Consensus 209 ~~~~~i~~~~hd~ 221 (302)
..+.+++.++|++
T Consensus 174 ~~~~~ii~~~~~l 186 (200)
T d1sgwa_ 174 EKGIVIISSREEL 186 (200)
T ss_dssp HHSEEEEEESSCC
T ss_pred CCCEEEEEEechh
Confidence 7666666655654
No 20
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=99.90 E-value=8.5e-25 Score=190.24 Aligned_cols=137 Identities=20% Similarity=0.213 Sum_probs=103.4
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHH---HHHHHhcccCCC--------
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAY---EQLLILGKYNDV-------- 155 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~---~ql~~~~~~~~~-------- 155 (302)
++++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.|+...... .++.+..|...+
T Consensus 17 ~vL~~isl~i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Ti~eN 96 (241)
T d2pmka1 17 VILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDN 96 (241)
T ss_dssp EEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCTTSBHHHH
T ss_pred ceEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEecccchhhhhceEEEEecccccCCcccccc
Confidence 578999999999999999999999999999999999999999999999987543321 111111221100
Q ss_pred -----------------------------C-----ee-ecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---CccchH
Q psy2881 156 -----------------------------P-----VI-SEKKITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQS 197 (302)
Q Consensus 156 -----------------------------~-----~~-~~~~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~~ 197 (302)
+ .. .......-.+..+-+||||++++|+++|+|||+ |+.+..
T Consensus 97 i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~t~i~~~g~~LSGGq~QRvalARal~~~p~ililDEpts~LD~~~~~ 176 (241)
T d2pmka1 97 ISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEH 176 (241)
T ss_dssp HCTTSTTCCHHHHHHHHHHHTCHHHHTTSTTGGGSBCSTTTTCCCHHHHHHHHHHHHHTTCCSEEEECCCCSCCCHHHHH
T ss_pred ccccCccccHHHHHHHHHHHhhHHHHHhhhcchhhhcCCCCCccCHHHHHHHhhhhhhhcccchhhhhCCccccCHHHHH
Confidence 0 00 000112233444445999999999999999998 999999
Q ss_pred HHHHHHHHHHHHhchhhccccceeehhh
Q psy2881 198 HLMRELKKIKKVIEKKIFELPYEIFLII 225 (302)
Q Consensus 198 ~l~~~L~~l~~~~~~~i~~~~hd~~lvl 225 (302)
.+++.|+++.+ ++|++++||++..+.
T Consensus 177 ~i~~~l~~l~~--~~Tvi~itH~l~~~~ 202 (241)
T d2pmka1 177 VIMRNMHKICK--GRTVIIIAHRLSTVK 202 (241)
T ss_dssp HHHHHHHHHHT--TSEEEEECSSGGGGT
T ss_pred HHHHHHHHHhC--CCEEEEEECCHHHHH
Confidence 99999999864 789999999987653
No 21
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=99.90 E-value=1.4e-24 Score=190.38 Aligned_cols=136 Identities=14% Similarity=0.196 Sum_probs=102.1
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHH---HHhcccCCC--------
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQL---LILGKYNDV-------- 155 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql---~~~~~~~~~-------- 155 (302)
++++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.|+......... .+..+...+
T Consensus 29 ~~L~~isl~i~~Ge~iaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~n 108 (253)
T d3b60a1 29 PALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANN 108 (253)
T ss_dssp CSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHH
T ss_pred ceeeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccCCCccEEEECCcccchhhhhhhhheEEEEeeccccCCcchhhh
Confidence 578999999999999999999999999999999999999999999999887543321110 011111000
Q ss_pred ----------------------------------Cee--ecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---Cccch
Q psy2881 156 ----------------------------------PVI--SEKKITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQ 196 (302)
Q Consensus 156 ----------------------------------~~~--~~~~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~ 196 (302)
... .......-.+..+-+||||++++|+++|+|||+ |+.+.
T Consensus 109 ~~~~~~~~~~~~~i~~a~~~~~l~~~i~~l~~gl~t~~~~~~~~LSGGqkQRvaiARal~~~p~ililDEpts~LD~~~~ 188 (253)
T d3b60a1 109 IAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESE 188 (253)
T ss_dssp HHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHH
T ss_pred hhhcCcccCCHHHHHHHHHHHhHHHHHHhccccchhhhcCCCCCcCHHHHHHHHHHHHHhcCCCEEEeccccccCCHHHH
Confidence 000 000112233444455999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHhchhhccccceeehh
Q psy2881 197 SHLMRELKKIKKVIEKKIFELPYEIFLI 224 (302)
Q Consensus 197 ~~l~~~L~~l~~~~~~~i~~~~hd~~lv 224 (302)
..+++.|+++.+ ++|++++||++..+
T Consensus 189 ~~i~~~l~~l~~--~~Tvi~itH~l~~~ 214 (253)
T d3b60a1 189 RAIQAALDELQK--NRTSLVIAHRLSTI 214 (253)
T ss_dssp HHHHHHHHHHHT--TSEEEEECSCGGGT
T ss_pred HHHHHHHHHhcc--CCEEEEEECCHHHH
Confidence 999999999864 78999999998754
No 22
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=99.90 E-value=3.9e-25 Score=192.67 Aligned_cols=138 Identities=15% Similarity=0.212 Sum_probs=102.6
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhH---HHHHHHhcccCC---------
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAA---YEQLLILGKYND--------- 154 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~---~~ql~~~~~~~~--------- 154 (302)
++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.|+..... +.++.+..|...
T Consensus 16 ~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~eN 95 (242)
T d1mv5a_ 16 QILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIREN 95 (242)
T ss_dssp CSEEEEEEEECTTEEEEEECCTTSSHHHHHHHHTTSSCCSBSCEEETTEESTTTSCSCCTTTCCEECCSSCCCCEEHHHH
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHHhhCCCCCEEEECCEEeccccHHHHHhheEEEccccccCCcchhhh
Confidence 57899999999999999999999999999999999999999999999987632110 001111111100
Q ss_pred -----------------------------CC----eee--cCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---Cccch
Q psy2881 155 -----------------------------VP----VIS--EKKITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQ 196 (302)
Q Consensus 155 -----------------------------~~----~~~--~~~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~ 196 (302)
.+ ... ......-.+..+-+||||++++|+++|+|||+ |+.+.
T Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~LSGGqkQRv~iARal~~~p~ililDEpts~LD~~~~ 175 (242)
T d1mv5a_ 96 LTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESE 175 (242)
T ss_dssp TTSCTTSCSCHHHHHHHHHHHTCTTTTTSSTTGGGCEESTTSBCCCHHHHHHHHHHHHHHHCCSEEEEECCSCSSCSSSC
T ss_pred eecccccccchhhHHHHHHHHHhhhhhccCcccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEecCCccccCHHHH
Confidence 00 000 00112334455556999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHhchhhccccceeehhhc
Q psy2881 197 SHLMRELKKIKKVIEKKIFELPYEIFLIID 226 (302)
Q Consensus 197 ~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~ 226 (302)
..+++.|+++.+ ++|++++||++..+..
T Consensus 176 ~~i~~~l~~l~~--~~Tvi~itH~l~~~~~ 203 (242)
T d1mv5a_ 176 SMVQKALDSLMK--GRTTLVIAHRLSTIVD 203 (242)
T ss_dssp CHHHHHHHHHHT--TSEEEEECCSHHHHHH
T ss_pred HHHHHHHHHHcC--CCEEEEEECCHHHHHh
Confidence 999999999863 7899999998775543
No 23
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=99.89 E-value=2.1e-24 Score=187.02 Aligned_cols=140 Identities=16% Similarity=0.135 Sum_probs=100.5
Q ss_pred ccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHH---hcccCCCCee-----
Q psy2881 87 SLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLI---LGKYNDVPVI----- 158 (302)
Q Consensus 87 ~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~---~~~~~~~~~~----- 158 (302)
..++++||++++||+++|+||||||||||+++|+|+. |.+|+|.+.|.++......+.... +.+....++.
T Consensus 13 ~~l~~isl~I~~Gei~~iiG~nGaGKSTLl~~l~Gl~-~~~G~I~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 91 (231)
T d1l7vc_ 13 TRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMT-SGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWH 91 (231)
T ss_dssp TTSCSEEEEEETTCEEECBCCTTSSHHHHHHHHHTSC-CCSSEEEESSSBGGGSCHHHHHHHEEEECSCCCCCSSCBHHH
T ss_pred ceecCEEEEEcCCCEEEEECCCCCcHHHHHHHHhCCC-CCceEEEECCEECCcCCHHHHHhhceeeeccccCCccccHHH
Confidence 3588999999999999999999999999999999965 688999999998643332221111 1111111100
Q ss_pred ----ecCC-------------------------CCCHHHHHHHHHHHHHhC-------CCCeEEEcCCC---CccchHHH
Q psy2881 159 ----SEKK-------------------------ITDPAAIAFNAINIAQKK-------NTDIVIVDTSG---RLSTQSHL 199 (302)
Q Consensus 159 ----~~~~-------------------------~~~~~~~~~~~la~al~~-------~~~llllDEP~---d~~~~~~l 199 (302)
.... ...-.+..+-+||+|+++ +|+++|+|||+ |+.+...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~LSgG~~Qrv~iA~al~~~~p~~~p~p~llllDEPt~gLD~~~~~~i 171 (231)
T d1l7vc_ 92 YLTLHQHDKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSAL 171 (231)
T ss_dssp HHHHHCSCTTCHHHHHHHHHHTTCTTTTTSBGGGCCHHHHHHHHHHHHHHHHCTTTCTTCCEEEESSCSTTCCHHHHHHH
T ss_pred HhhhccchhhHHHHHHHHHHhcCCHhHhCcChhhcCHHHHHHHHHHHHHHhhCcccCCCCCEEEEcCCCCCCCHHHHHHH
Confidence 0000 011122223348999986 67999999997 99999999
Q ss_pred HHHHHHHHHHhchhhccccceeehhhcCC
Q psy2881 200 MRELKKIKKVIEKKIFELPYEIFLIIDGN 228 (302)
Q Consensus 200 ~~~L~~l~~~~~~~i~~~~hd~~lvl~~~ 228 (302)
++.++++++. |.++++++||+..+.+.+
T Consensus 172 ~~~i~~l~~~-g~tii~vtHdl~~~~~~~ 199 (231)
T d1l7vc_ 172 DKILSALCQQ-GLAIVMSSHDLNHTLRHA 199 (231)
T ss_dssp HHHHHHHHHT-TCEEEECCCCHHHHHHHC
T ss_pred HHHHHHHHhC-CCEEEEEeCCHHHHHHHC
Confidence 9999999764 899999999988776654
No 24
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=99.88 E-value=5.1e-24 Score=186.68 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=101.5
Q ss_pred hccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHH---HHHHhcccC---------
Q psy2881 86 KSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYE---QLLILGKYN--------- 153 (302)
Q Consensus 86 ~~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~---ql~~~~~~~--------- 153 (302)
.++++++||++++|++++|+||||||||||++.|+|+++|++|+|.++|.|+......+ ++.+..+..
T Consensus 31 ~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Ti~e 110 (255)
T d2hyda1 31 APILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKE 110 (255)
T ss_dssp CCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHH
T ss_pred CcceeceEEEEcCCCEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEcccCCHHHhhheeeeeeccccCCCCCHHH
Confidence 35899999999999999999999999999999999999999999999998864322110 001111110
Q ss_pred ---------------------CC-------C------eeecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---Cccch
Q psy2881 154 ---------------------DV-------P------VISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQ 196 (302)
Q Consensus 154 ---------------------~~-------~------~~~~~~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~ 196 (302)
++ | +-.........+..+-+||||++++|+++|+|||+ |+.+.
T Consensus 111 Ni~~g~~~~~~~~~~~al~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~QRi~iARal~~~p~ililDEpts~LD~~t~ 190 (255)
T d2hyda1 111 NILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESE 190 (255)
T ss_dssp HHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHH
T ss_pred HHhccCcCCCHHHHHHHHHHhCCHHHHHhccccccchhcCCCCCcCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHH
Confidence 00 0 00000112233344455999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHhchhhccccceeehhh
Q psy2881 197 SHLMRELKKIKKVIEKKIFELPYEIFLII 225 (302)
Q Consensus 197 ~~l~~~L~~l~~~~~~~i~~~~hd~~lvl 225 (302)
..+++.|.++.+ ++|++++||++..+-
T Consensus 191 ~~i~~~l~~l~~--~~TvI~itH~~~~~~ 217 (255)
T d2hyda1 191 SIIQEALDVLSK--DRTTLIVAHRLSTIT 217 (255)
T ss_dssp HHHHHHHHHHTT--TSEEEEECSSGGGTT
T ss_pred HHHHHHHHHHhc--CCEEEEEeCCHHHHH
Confidence 999999988864 679999999877543
No 25
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=3.4e-23 Score=184.06 Aligned_cols=140 Identities=13% Similarity=0.096 Sum_probs=97.7
Q ss_pred HhhccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEeccc------C--CChhHHHHHHH-------
Q psy2881 84 LLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD------T--FRAAAYEQLLI------- 148 (302)
Q Consensus 84 ~l~~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d------~--~~~~~~~ql~~------- 148 (302)
.-+++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.+.|.- . +.....+.+..
T Consensus 47 ~g~pvL~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~p~~G~I~~~g~i~~v~Q~~~l~~~tv~eni~~~~~~~~~ 126 (281)
T d1r0wa_ 47 VGNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHSGRVSFCSQFSWIMPGTIKENIIFGVSYDEY 126 (281)
T ss_dssp TTCEEEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEEEEECCSCEEEECSSCCCCSEEHHHHHTTTSCCCHH
T ss_pred CCCeEEeCeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCcCCCcEEEECCEEEEEeccccccCceeeccccccccccch
Confidence 34689999999999999999999999999999999999999999999887732 1 11112222110
Q ss_pred ----hcccC-------CCC-----eee-cCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC---CccchHHHHHHHHHHHH
Q psy2881 149 ----LGKYN-------DVP-----VIS-EKKITDPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQSHLMRELKKIKK 208 (302)
Q Consensus 149 ----~~~~~-------~~~-----~~~-~~~~~~~~~~~~~~la~al~~~~~llllDEP~---d~~~~~~l~~~L~~l~~ 208 (302)
..+.. .++ ... ........+..+-+||||++++|+++|+|||+ |+.+...+++.+.....
T Consensus 127 ~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~LSgGqkQRv~lARaL~~~p~illLDEPts~LD~~~~~~i~~~~~~~~~ 206 (281)
T d1r0wa_ 127 RYKSVVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLM 206 (281)
T ss_dssp HHHHHHHHTTCHHHHTTSTTGGGCEECTTCTTSCHHHHHHHHHHHHHHSCCSEEEEESCCCSSCHHHHHHHHHHCCCCCT
T ss_pred HHHHHHHHHHhHHHHHhchhhhhhhhhhhccCCCHHHHHHHHHHHHHHhCccchhhcCccccCCHHHHHHHHHHHHHHhh
Confidence 00000 010 011 11123455666778999999999999999998 88887777765433222
Q ss_pred Hhchhhccccceeehh
Q psy2881 209 VIEKKIFELPYEIFLI 224 (302)
Q Consensus 209 ~~~~~i~~~~hd~~lv 224 (302)
.++|+++++|++..+
T Consensus 207 -~~~tvi~itH~~~~l 221 (281)
T d1r0wa_ 207 -ANKTRILVTSKMEHL 221 (281)
T ss_dssp -TTSEEEEECSCHHHH
T ss_pred -CCCEEEEEechHHHH
Confidence 367899999976543
No 26
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=99.48 E-value=1.6e-14 Score=117.89 Aligned_cols=118 Identities=17% Similarity=0.126 Sum_probs=75.2
Q ss_pred EEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHh-cccCCCC-e----------eecCCCCCH---
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLIL-GKYNDVP-V----------ISEKKITDP--- 166 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~-~~~~~~~-~----------~~~~~~~~~--- 166 (302)
++|+||||||||||++.|++.++++.|.+...+.+....+. +.... ....+.. . .......+.
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKK--RTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYF 80 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGGGEEEEEEEEEC--------CCEEEEEETTCCEEEEEETTCCCSSEETTEEECHHHH
T ss_pred EEEECCCCcHHHHHHHHHHhcCCCCcceEEECCcchHHHHH--hhhhhhhhhhHHHHHHhhhhhhhhhhhhhhhcCcchh
Confidence 78999999999999999999999999999887765431110 00000 0000000 0 000001111
Q ss_pred ----HHHHHHHHHHHHhCCCCeEEEcCCC-CccchHHHHHHHHHHHHHhchhhcccccee
Q psy2881 167 ----AAIAFNAINIAQKKNTDIVIVDTSG-RLSTQSHLMRELKKIKKVIEKKIFELPYEI 221 (302)
Q Consensus 167 ----~~~~~~~la~al~~~~~llllDEP~-d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~ 221 (302)
......++++++..+|+++++|||+ +........+.+.++.+..+.++++++|+.
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~vlllDE~~~~~~~~~~~~~~l~~~l~~~~~~il~~~h~~ 140 (178)
T d1ye8a1 81 EELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIR 140 (178)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEECCCSTTGGGCHHHHHHHHHHHTCTTSEEEEECCSS
T ss_pred hhhhhhhHHHHHHHHHhcCCCceeecCCCccchhhHHHHHHHHHHhccCCCEEEEEEccH
Confidence 1123345788889999999999998 555566777888887766677888888863
No 27
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.13 E-value=1.3e-11 Score=107.47 Aligned_cols=51 Identities=12% Similarity=0.157 Sum_probs=43.3
Q ss_pred HHHHHHhCCCCeEEEcCCC---CccchHHHHHHHHHHHHHhchhhccccceeehh
Q psy2881 173 AINIAQKKNTDIVIVDTSG---RLSTQSHLMRELKKIKKVIEKKIFELPYEIFLI 224 (302)
Q Consensus 173 ~la~al~~~~~llllDEP~---d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lv 224 (302)
++++++..+|++++||||+ |+..+..+++.|+++.+. +.+++++||+..++
T Consensus 217 a~~~~l~~~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~-~~qviv~TH~~~~~ 270 (292)
T g1f2t.1 217 AMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKK-IPQVILVSHDEELK 270 (292)
T ss_dssp HHHHHHHSSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGG-SSEEEEEESCGGGG
T ss_pred HHhhhhcCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhC-CCEEEEEeecHHHH
Confidence 3677889999999999997 888899999999988764 45889999987753
No 28
>d1vmaa1 a.24.13.1 (A:1-81) Signal recognition particle receptor, FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=99.13 E-value=1.1e-10 Score=83.06 Aligned_cols=58 Identities=38% Similarity=0.565 Sum_probs=52.8
Q ss_pred chHHHHHHHHHHHHH----HHHHHhhhcCcCChHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Q psy2881 3 INWITRLKESLSKTA----CNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKK 60 (302)
Q Consensus 3 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 60 (302)
||||.++++++++++ +++.++|.++++|++.+++|++.|+.+||+++++.+|++.+++
T Consensus 1 Mg~f~klk~gL~KTr~~~~~~l~~lf~~~~iDe~~leeLEe~LI~aDvGv~tt~~Ii~~lr~ 62 (81)
T d1vmaa1 1 MGLFDFLKKGLQKTKETFFGRVVKLLKGKKLDDETREELEELLIQADVGVETTEYILERLEE 62 (81)
T ss_dssp -CHHHHHHHHHHHHHHHTHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCHHHHHHHHHHHHh
Confidence 899999999999996 5667888888999999999999999999999999999998864
No 29
>d2qy9a1 a.24.13.1 (A:201-284) Signal recognition particle receptor, FtsY {Escherichia coli [TaxId: 562]}
Probab=99.00 E-value=5.1e-10 Score=80.20 Aligned_cols=77 Identities=38% Similarity=0.501 Sum_probs=68.9
Q ss_pred HHHHHH----HHHHHhhhcCcCChHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhc
Q psy2881 12 SLSKTA----CNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKS 87 (302)
Q Consensus 12 ~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 87 (302)
++++++ +++.++|.+++++++++++|++.|+.+||++++|.+|++.+++....++..+++.++..+++.+.+.+.+
T Consensus 2 gL~KTr~~~~~~i~~l~~~~~id~~~leeLEe~LI~aDvG~~tt~~ii~~lk~~~~~~~~~~~~~l~~~L~~~i~~iL~~ 81 (84)
T d2qy9a1 2 SLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAK 81 (84)
T ss_dssp HTTTTTTTSTTHHHHHHTTCBCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCBGGGHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhch
Confidence 445553 6788899888999999999999999999999999999999999988888889999999999999999976
Q ss_pred c
Q psy2881 88 L 88 (302)
Q Consensus 88 ~ 88 (302)
.
T Consensus 82 ~ 82 (84)
T d2qy9a1 82 V 82 (84)
T ss_dssp T
T ss_pred h
Confidence 4
No 30
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.52 E-value=6.1e-08 Score=84.86 Aligned_cols=45 Identities=11% Similarity=0.142 Sum_probs=36.9
Q ss_pred hCCCCeEEEcCCC---CccchHHHHHHHHHHHHHhchhhccccceeehh
Q psy2881 179 KKNTDIVIVDTSG---RLSTQSHLMRELKKIKKVIEKKIFELPYEIFLI 224 (302)
Q Consensus 179 ~~~~~llllDEP~---d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lv 224 (302)
..+++++++|||. |+.....+++.|.++.+. +..++++||+..++
T Consensus 300 ~~~~~illiDEpe~~Lh~~~~~~l~~~l~~~~~~-~~QviitTHs~~~~ 347 (369)
T g1ii8.1 300 AGEISLLILDEPTPYLDEERRRKLITIMERYLKK-IPQVILVSHDEELK 347 (369)
T ss_dssp HSSCSEEEEECCSSSSCSHHHHHHHHHHHHTGGG-SSEEEEEESCGGGG
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEechHHHH
Confidence 4789999999996 899999999999988664 33678899987653
No 31
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.44 E-value=3e-08 Score=81.76 Aligned_cols=41 Identities=27% Similarity=0.363 Sum_probs=34.7
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCC
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFR 139 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~ 139 (302)
|-+++++|++||||||+.++|+..+...+-++.+.+.|..|
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~D~~r 42 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYR 42 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEccccee
Confidence 46899999999999999999999888777778777777543
No 32
>d1ls1a1 a.24.13.1 (A:1-88) Signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=98.44 E-value=6e-07 Score=64.02 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCcCCh----HHHHHHHHHHHHCCCChHHHHHHHHHHHHHHhcCC----CCCHHHHHHH
Q psy2881 5 WITRLKESLSKTACNLKSLIVNKKIDK----NLYNELESDLLKADVGFETTQFLLNELKKIIYSKK----LFNTEQVRNV 76 (302)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 76 (302)
||+.|.++++.. ++++.+...+++ +.+.+++.+|+++||+..+++++++.+++++.+++ ..+.+.+..+
T Consensus 1 MF~~L~~~l~~a---~~~l~g~~~i~E~~i~~~l~eir~ALLeADV~l~vvk~f~~~ik~k~~g~~v~~~~~p~~~iiki 77 (88)
T d1ls1a1 1 MFQQLSARLQEA---IGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEALGKQVLESLTPAEVILAT 77 (88)
T ss_dssp CCHHHHHHHHHH---HHTTTTSCSCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTTTTCSCHHHHHHHH
T ss_pred ChHHHHHHHHHH---HHHhcCCCCCCHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHHhHHHhhcCCCHHHHHHHH
Confidence 678888887655 444444557887 46789999999999999999999999999987765 3456788899
Q ss_pred HHHHHHHHhh
Q psy2881 77 LHNLLVNLLK 86 (302)
Q Consensus 77 l~~~l~~~l~ 86 (302)
+.++|.+.+.
T Consensus 78 V~dELv~lLG 87 (88)
T d1ls1a1 78 VYEALKEALG 87 (88)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhC
Confidence 9999988763
No 33
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=98.40 E-value=3.4e-06 Score=74.68 Aligned_cols=146 Identities=17% Similarity=0.217 Sum_probs=83.2
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChh-------HHHHHHHhcccCCCCeeecCCCCCHH--
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAA-------AYEQLLILGKYNDVPVISEKKITDPA-- 167 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~-------~~~ql~~~~~~~~~~~~~~~~~~~~~-- 167 (302)
.+.-+++|.||.|||||||+..|+..+...+.+|.+...|+.+.- ..-.........++-+..........
T Consensus 49 ~~~~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~~~gg~llgdr~rm~~~~~~~~~~ir~~~~~~~~gg~ 128 (323)
T d2qm8a1 49 GRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRNAFIRPSPSSGTLGGV 128 (323)
T ss_dssp CCSEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSSCCCSSCCGGGSTTGGGCTTEEEECCCCCSSHHHH
T ss_pred CCceEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccccHHHHhccccchhhHHHHhcccceeeccccccccccch
Confidence 345789999999999999999999888878889999988875321 00001111111111111222222222
Q ss_pred -HHHHHHHHHHHhCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHHHHHHHHhhcCC
Q psy2881 168 -AIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRI 246 (302)
Q Consensus 168 -~~~~~~la~al~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~~~~~f~~~~~~ 246 (302)
....+.+..+-..+.+++|+-+.|..+....+. ...|-..+|+..+.|.+.-..-....+. .
T Consensus 129 ~~~~~~~i~~~~~~g~d~iiiETVG~gq~e~~~~---------------~~~D~~v~v~~p~~GD~iQ~~k~gilE~--a 191 (323)
T d2qm8a1 129 AAKTRETMLLCEAAGFDVILVETVGVGQSETAVA---------------DLTDFFLVLMLPGAGDELQGIKKGIFEL--A 191 (323)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECSSSSCHHHHH---------------TTSSEEEEEECSCC------CCTTHHHH--C
T ss_pred hHHHHHHHHhhccCCCCeEEEeehhhhhhhhhhh---------------cccceEEEEeeccchhhhhhhhhhHhhh--h
Confidence 233444555566889999999999776644321 1245556666666654221100111111 3
Q ss_pred CeEEEecCCCCCc
Q psy2881 247 TGLIITKLDGTTK 259 (302)
Q Consensus 247 ~~~i~tk~d~~~~ 259 (302)
|.+++||.|....
T Consensus 192 Di~vvNKaD~~~~ 204 (323)
T d2qm8a1 192 DMIAVNKADDGDG 204 (323)
T ss_dssp SEEEEECCSTTCC
T ss_pred heeeEeccccccc
Confidence 7899999995433
No 34
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=98.36 E-value=1.3e-06 Score=77.63 Aligned_cols=145 Identities=15% Similarity=0.174 Sum_probs=80.6
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHH-----HHHH--HhcccCCCCeeecCCC---CCH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAY-----EQLL--ILGKYNDVPVISEKKI---TDP 166 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~-----~ql~--~~~~~~~~~~~~~~~~---~~~ 166 (302)
.+.-+++|.||+|||||||+..|+..+...+.+|.+...|+...-.. ++.+ .+....++-....... ...
T Consensus 52 ~~~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~~ggailgdr~rm~~~~~~~~~~ir~~~~~g~lgg~ 131 (327)
T d2p67a1 52 GNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGA 131 (327)
T ss_dssp SCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC---------------CTTTTCTTEEEEEECC-----CH
T ss_pred CCceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCceeeeccccccchhHHHHhcccccccccccccccccccc
Confidence 45679999999999999999999999998888999999997643211 1111 1111111111111111 123
Q ss_pred HHHHHHHHHHHHhCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHHHHHHHHhhcCC
Q psy2881 167 AAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRI 246 (302)
Q Consensus 167 ~~~~~~~la~al~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~~~~~f~~~~~~ 246 (302)
.....+.+..+-..++|++|+.+.|.......+ . ...|-..+|+..+.|.+.-.......+. .
T Consensus 132 ~~~~~~~~~~~~~~g~d~iliEtvG~gq~e~~i-------~--------~~aD~~l~v~~P~~Gd~iq~~k~gi~e~--a 194 (327)
T d2p67a1 132 SQRARELMLLCEAAGYDVVIVETVGVGQSETEV-------A--------RMVDCFISLQIAGGGDDLQGIKKGLMEV--A 194 (327)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEECCTTHHHHH-------H--------TTCSEEEEEECC------CCCCHHHHHH--C
T ss_pred hhhhhHHHHHHHhcCCCeEEEeeccccccchhh-------h--------hccceEEEEecCCCchhhhhhchhhhcc--c
Confidence 334445565566789999999999865543221 1 1234455556555543210001111122 3
Q ss_pred CeEEEecCCCCC
Q psy2881 247 TGLIITKLDGTT 258 (302)
Q Consensus 247 ~~~i~tk~d~~~ 258 (302)
|.+|+||.|...
T Consensus 195 Di~VvNKaD~~~ 206 (327)
T d2p67a1 195 DLIVINKDDGDN 206 (327)
T ss_dssp SEEEECCCCTTC
T ss_pred cEEEEEeecccc
Confidence 689999999754
No 35
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=98.31 E-value=2.8e-07 Score=72.91 Aligned_cols=38 Identities=24% Similarity=0.211 Sum_probs=34.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
+++|+|++|||||||++.|+..+...+.+|.+...|..
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~~d~~ 41 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHH 41 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEeccccc
Confidence 79999999999999999999999998888988877754
No 36
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=98.26 E-value=3.7e-06 Score=72.15 Aligned_cols=123 Identities=17% Similarity=0.139 Sum_probs=70.9
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHh-hhCCCeEEEecccCCChhHHHH-------------------------HHHh
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYF-KKRKKSVLLAACDTFRAAAYEQ-------------------------LLIL 149 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~-~~~~g~V~l~~~d~~~~~~~~q-------------------------l~~~ 149 (302)
+.+|+++.|.|++|+||||++..++.-+ ...+.+|.+...+......... +..+
T Consensus 32 ~~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~E~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (277)
T d1cr2a_ 32 ARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDLIGLHNRVRLRQSDSLKREIIENGKFDQW 111 (277)
T ss_dssp BCTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEESSSCHHHHHHHHHHHHTTCCGGGCHHHHHHHHHTSHHHHH
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeeeccchhhHHhHHHHHhhcCCchhhcccccchhhhHHHHHH
Confidence 5789999999999999999999998654 4556788888765421110000 0011
Q ss_pred cc----cCCCCeeecCCCCCHHHHHHHHHH-HHHhCCCCeEEEcCCC-------C---ccchHHHHHHHHHHHHHhchhh
Q psy2881 150 GK----YNDVPVISEKKITDPAAIAFNAIN-IAQKKNTDIVIVDTSG-------R---LSTQSHLMRELKKIKKVIEKKI 214 (302)
Q Consensus 150 ~~----~~~~~~~~~~~~~~~~~~~~~~la-~al~~~~~llllDEP~-------d---~~~~~~l~~~L~~l~~~~~~~i 214 (302)
.. ...+..+............ ..+. .....+|++|++|--. + ......++..|+++++..+.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~v 190 (277)
T d1cr2a_ 112 FDELFGNDTFHLYDSFAEAETDRLL-AKLAYMRSGLGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVL 190 (277)
T ss_dssp HHHHHSSSCEEEECCC-CCCHHHHH-HHHHHHHHTTCCSEEEEEEEEC----------CHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHhhccceeeeeccccchhHHHHH-HHhhhhhhccCcceEEEcccccccccccccchhHHHHHHHHHHHHHhhhccccc
Confidence 00 0111111111222222222 2222 2345689999999532 1 1223457788888888888888
Q ss_pred ccccc
Q psy2881 215 FELPY 219 (302)
Q Consensus 215 ~~~~h 219 (302)
++++|
T Consensus 191 i~~~q 195 (277)
T d1cr2a_ 191 VVICH 195 (277)
T ss_dssp EEEEE
T ss_pred eeecc
Confidence 77777
No 37
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=98.24 E-value=9.5e-09 Score=82.76 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=30.3
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
.+++|.||.||||||+++.|+..+...+.++.+..
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~ 36 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVS 36 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHcCCCeEEEe
Confidence 68999999999999999999999987777766543
No 38
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=98.20 E-value=3.4e-06 Score=72.09 Aligned_cols=122 Identities=16% Similarity=0.110 Sum_probs=69.8
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhh----------hCCCeEEEecccCCChhHHHHHHHhcccCC----------CC
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFK----------KRKKSVLLAACDTFRAAAYEQLLILGKYND----------VP 156 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~----------~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~----------~~ 156 (302)
.+|+++.|.|++|+||||++..||..+. ...+.|.+.+.+.......+.+..+....+ ..
T Consensus 27 ~pg~~~~i~G~~G~GKS~l~l~la~~ia~g~~~~~~~~~~~~~vl~~~~E~~~~~~~~Rl~~~~~~~~~~~~~~~~~~~~ 106 (274)
T d1nlfa_ 27 VAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAHLSAEERQAVADGLL 106 (274)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHHHTCCCTTCCCCCCCCCEEEEESSSCHHHHHHHHHHHHTTSCHHHHHHHHHHEE
T ss_pred cCCcEEEEEeCCCCCHHHHHHHHHHHHHcCCCcccccccCCCceEEEeccchHHHHHHHHHHHhhccChhhhhcccccce
Confidence 3689999999999999999988876542 234678887766543222222222222111 00
Q ss_pred eeecCCC--CCHHHHHHHHHHHHHhCCCCeEEEcCCC--------CccchHHHHHHHHHHHHHhchhhccccc
Q psy2881 157 VISEKKI--TDPAAIAFNAINIAQKKNTDIVIVDTSG--------RLSTQSHLMRELKKIKKVIEKKIFELPY 219 (302)
Q Consensus 157 ~~~~~~~--~~~~~~~~~~la~al~~~~~llllDEP~--------d~~~~~~l~~~L~~l~~~~~~~i~~~~h 219 (302)
+...... ..........+. ....++++|++|.-. +......++..|..+++..+.+++++.|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~v~H 178 (274)
T d1nlfa_ 107 IQPLIGSLPNIMAPEWFDGLK-RAAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHH 178 (274)
T ss_dssp ECCCTTSCCCTTSHHHHHHHH-HHHTTCSEEEEECGGGGCCSCTTCHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred eccccCccchhHHHHHHHHHH-HhccCccEEecCchhhhccccccchhhHHHHHHHHHHHhhcCCCceehhhh
Confidence 1111000 011111111122 235789999999653 2223346777788888877888877777
No 39
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=98.19 E-value=2e-06 Score=72.19 Aligned_cols=124 Identities=14% Similarity=0.056 Sum_probs=71.3
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhccc------CCCCeeecCC--CCCHH
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKY------NDVPVISEKK--ITDPA 167 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~------~~~~~~~~~~--~~~~~ 167 (302)
+++|.++.|.||+|+||||++..++.-....++.+.+...+.......+....+... .+...+.... .....
T Consensus 23 i~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (242)
T d1tf7a2 23 FFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLE 102 (242)
T ss_dssp EESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGGSCHH
T ss_pred CcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCCHHHHHHHHHHcCCChHHHhhcCceEEEEeecchhhHH
Confidence 568999999999999999999999988777778888887664332222222211110 0111111111 11222
Q ss_pred HHHHHHHHHHHhCCCCeEEEcCCC------CccchHHHHHHHHHHHHHhchhhccccc
Q psy2881 168 AIAFNAINIAQKKNTDIVIVDTSG------RLSTQSHLMRELKKIKKVIEKKIFELPY 219 (302)
Q Consensus 168 ~~~~~~la~al~~~~~llllDEP~------d~~~~~~l~~~L~~l~~~~~~~i~~~~h 219 (302)
.............+|+++++|.-+ +.......+..|.++++..+.+++++.|
T Consensus 103 ~~~~~i~~~i~~~~~~~vviDs~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~ 160 (242)
T d1tf7a2 103 DHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNT 160 (242)
T ss_dssp HHHHHHHHHHHTTCCSEEEEECHHHHTSSSCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHhcCCceeeeecchhhhcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 222222222345689999999753 2233334555556666666777666665
No 40
>d1j8yf1 a.24.13.1 (F:3-86) Signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=98.18 E-value=5.3e-06 Score=58.44 Aligned_cols=75 Identities=21% Similarity=0.320 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCcCCh----HHHHHHHHHHHHCCCChHHHHHHHHHHHHHHhcCCC----CCHHHHHHH
Q psy2881 5 WITRLKESLSKTACNLKSLIVNKKIDK----NLYNELESDLLKADVGFETTQFLLNELKKIIYSKKL----FNTEQVRNV 76 (302)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 76 (302)
||++|.+.+++ +.++..+++ +.+.+++.+|+++||+.+++++|.+.+++.+.+++. .+.+.+..+
T Consensus 1 l~~~l~~a~~k-------l~~~~~i~E~~i~~~l~eIr~ALLeADVn~~vv~~f~~~ik~k~~~~~v~~g~~~~~~i~ki 73 (84)
T d1j8yf1 1 LLDNLRDTVRK-------FLTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNEKPPTYIERREWFIKI 73 (84)
T ss_dssp CHHHHHHHHHH-------HHSCCSCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCCTTCCHHHHHHHH
T ss_pred CchHHHHHHHH-------HhCCCCCCHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhhhhhccCCCHHHHHHHH
Confidence 45666666544 344556665 567899999999999999999999999999987763 356788899
Q ss_pred HHHHHHHHhh
Q psy2881 77 LHNLLVNLLK 86 (302)
Q Consensus 77 l~~~l~~~l~ 86 (302)
+.++|.+.+.
T Consensus 74 V~~eLv~lLG 83 (84)
T d1j8yf1 74 VYDELSNLFG 83 (84)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhC
Confidence 9999988763
No 41
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=98.17 E-value=7.9e-07 Score=70.69 Aligned_cols=39 Identities=23% Similarity=0.112 Sum_probs=34.2
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
.+++|+|++|||||||+..|+..++..+.+|.+.-.|..
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik~d~~ 40 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGH 40 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC-
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEEeccC
Confidence 478999999999999999999999999889988766644
No 42
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.11 E-value=7.2e-07 Score=70.97 Aligned_cols=38 Identities=29% Similarity=0.298 Sum_probs=33.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
.+.|+||+|+|||||++.++..+...+++|.+.+++..
T Consensus 3 ~v~ItG~~GtGKTtl~~~i~~~l~~~~~~v~~~~~~~~ 40 (189)
T d2i3ba1 3 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEV 40 (189)
T ss_dssp CEEEESCCSSCHHHHHHHHHHHHHHTTCCCEEEECCEE
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 57899999999999999999999998888887776643
No 43
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.04 E-value=2.5e-05 Score=64.70 Aligned_cols=41 Identities=34% Similarity=0.389 Sum_probs=36.5
Q ss_pred CeEEEEE-cCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCC
Q psy2881 99 PFVIMIV-GVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFR 139 (302)
Q Consensus 99 g~ii~lv-GpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~ 139 (302)
|++|++. +..|+||||+...||..+...+.+|.+.+.|...
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~~~ 43 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTM 43 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTS
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 6789999 5789999999999999999888899999998653
No 44
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=98.00 E-value=5e-06 Score=75.72 Aligned_cols=86 Identities=15% Similarity=0.170 Sum_probs=54.1
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeee--cCCCCCHHHHHHHHH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVIS--EKKITDPAAIAFNAI 174 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 174 (302)
.+..++.+.||+|||||||+..+...+.....+|.-...++-. ...++.... .....+. ..++
T Consensus 156 ~~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~-----------~~~~~~q~~v~~~~~~~~----~~~l 220 (401)
T d1p9ra_ 156 RPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEF-----------DIDGIGQTQVNPRVDMTF----ARGL 220 (401)
T ss_dssp SSSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCS-----------CCSSSEEEECBGGGTBCH----HHHH
T ss_pred hhhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCccc-----------ccCCCCeeeecCCcCCCH----HHHH
Confidence 3567899999999999999999988775445565544333210 011111111 1111122 2446
Q ss_pred HHHHhCCCCeEEEcCCCCccchH
Q psy2881 175 NIAQKKNTDIVIVDTSGRLSTQS 197 (302)
Q Consensus 175 a~al~~~~~llllDEP~d~~~~~ 197 (302)
..++-++||+|++.|--|..+..
T Consensus 221 ~~~lR~dPDvi~igEiRd~~ta~ 243 (401)
T d1p9ra_ 221 RAILRQDPDVVMVGEIRDLETAQ 243 (401)
T ss_dssp HHHGGGCCSEEEESCCCSHHHHH
T ss_pred HHHHhhcCCEEEecCcCChHHHH
Confidence 66788999999999998876543
No 45
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.99 E-value=6e-06 Score=69.71 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=25.3
Q ss_pred cCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 88 LEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 88 ~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
+-.+++++ +.+.++.|.|||.+||||+++.++-.
T Consensus 31 VpNdi~l~-~~~~~~iiTGpN~~GKSt~lk~i~l~ 64 (234)
T d1wb9a2 31 IANPLNLS-PQRRMLIITGPNMGGKSTYMRQTALI 64 (234)
T ss_dssp CCEEEEEC-SSSCEEEEECCTTSSHHHHHHHHHHH
T ss_pred cceeEEEC-CCceEEEEeccCchhhHHHHHHHHHH
Confidence 33444444 23468889999999999999998754
No 46
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.94 E-value=4.3e-05 Score=63.16 Aligned_cols=41 Identities=27% Similarity=0.319 Sum_probs=35.8
Q ss_pred eEEEEE-cCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCCh
Q psy2881 100 FVIMIV-GVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRA 140 (302)
Q Consensus 100 ~ii~lv-GpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~ 140 (302)
++|++. |..|+||||+...||..+...+.+|.+.+.|.+..
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~~~ 43 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMA 43 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCSSS
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 478888 68899999999999999998888999999997643
No 47
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.88 E-value=1.3e-05 Score=70.87 Aligned_cols=82 Identities=15% Similarity=0.176 Sum_probs=50.8
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQ 178 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al 178 (302)
+..+.+.||+||||||+++.|++.+++...-|.+- |+..... ....++........... .+.+..++
T Consensus 166 ~~nili~G~tgSGKTT~l~al~~~i~~~~rivtiE--d~~El~l-------~~~~~~~~~~~~~~~~~----~~ll~~~l 232 (323)
T d1g6oa_ 166 GKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIE--DTEEIVF-------KHHKNYTQLFFGGNITS----ADCLKSCL 232 (323)
T ss_dssp TCCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEE--SSCCCCC-------SSCSSEEEEECBTTBCH----HHHHHHHT
T ss_pred CCCEEEEeeccccchHHHHHHhhhcccccceeecc--chhhhhc-------ccccccceeccccchhH----HHHHHHHh
Confidence 44588999999999999999999988766555553 3322110 00111111111112222 24456677
Q ss_pred hCCCCeEEEcCCCCc
Q psy2881 179 KKNTDIVIVDTSGRL 193 (302)
Q Consensus 179 ~~~~~llllDEP~d~ 193 (302)
-++||.+++.|--+.
T Consensus 233 R~~pd~iivgEiR~~ 247 (323)
T d1g6oa_ 233 RMRPDRIILGELRSS 247 (323)
T ss_dssp TSCCSEEEESCCCST
T ss_pred ccCCCcccCCccCch
Confidence 789999999998644
No 48
>d1okkd1 a.24.13.1 (D:21-78) Signal recognition particle receptor, FtsY {Thermus aquaticus [TaxId: 271]}
Probab=97.85 E-value=9e-06 Score=52.87 Aligned_cols=54 Identities=28% Similarity=0.404 Sum_probs=45.5
Q ss_pred CcCChHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhc
Q psy2881 27 KKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKS 87 (302)
Q Consensus 27 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 87 (302)
...+++++++|++.|+.+||+++++.+|++.+++... +.++.++++.+.+.+.|
T Consensus 5 g~~~d~~leeLEe~Li~ADvGv~tt~~ii~~Lr~~~~-------~~l~~~Lke~l~~~L~P 58 (58)
T d1okkd1 5 GGNLEEVLEELEMALLAADVGLSATEEILQEVRASGR-------KDLKEAVKEKLVGMLEP 58 (58)
T ss_dssp TSCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC-------SCHHHHHHHHHHHHTCC
T ss_pred CCCcHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHhCc
Confidence 4567889999999999999999999999999986642 34788888888887754
No 49
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=97.84 E-value=5.5e-05 Score=64.84 Aligned_cols=139 Identities=17% Similarity=0.150 Sum_probs=70.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhh--hCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFK--KRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQ 178 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~--~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al 178 (302)
.++|+|+.|+|||||+..|...-. ...|+|. .|.........++-+.. .....+....
T Consensus 4 Nv~iiGh~~~GKTtL~e~ll~~~g~~~~~g~v~-~g~~~~D~~~~E~~r~~--ti~~~~~~~~----------------- 63 (267)
T d2dy1a2 4 TVALVGHAGSGKTTLTEALLYKTGAKERRGRVE-EGTTTTDYTPEAKLHRT--TVRTGVAPLL----------------- 63 (267)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTSSSSCCCGG-GTCCSSCCSHHHHHTTS--CCSCEEEEEE-----------------
T ss_pred EEEEEcCCCCcHHHHHHHHHHHcCCchhhccch-hccccccchHHHHHhCC--eEEeeccccc-----------------
Confidence 589999999999999999964432 2234332 11111111222221111 1111111111
Q ss_pred hCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhH-HHHHHHHHhhcC-CCeEEEecCCC
Q psy2881 179 KKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNT-LSQIKEFSKILR-ITGLIITKLDG 256 (302)
Q Consensus 179 ~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~-~~~~~~f~~~~~-~~~~i~tk~d~ 256 (302)
-.+..+-|+|+||......+....+. +..-..+|+++..|... ....-.+....+ +..++++|+|.
T Consensus 64 ~~~~~~n~iDtPGh~dF~~e~~~al~------------~~D~avlvvda~~Gv~~~t~~~~~~~~~~~~p~~i~iNk~D~ 131 (267)
T d2dy1a2 64 FRGHRVFLLDAPGYGDFVGEIRGALE------------AADAALVAVSAEAGVQVGTERAWTVAERLGLPRMVVVTKLDK 131 (267)
T ss_dssp ETTEEEEEEECCCSGGGHHHHHHHHH------------HCSEEEEEEETTTCSCHHHHHHHHHHHHTTCCEEEEEECGGG
T ss_pred ccccceeEEccCchhhhhhhhhhhhc------------ccCceEEEeeccCCccchhHHHHHhhhhcccccccccccccc
Confidence 13467889999995443333322221 23455677788877522 222222222333 23568899997
Q ss_pred CCchh-HHHHhhhHhC
Q psy2881 257 TTKGG-ILAAIAKKYS 271 (302)
Q Consensus 257 ~~~~g-~~~~~~~~~~ 271 (302)
....- .+.++...++
T Consensus 132 ~~~~~~~l~~~~~~lg 147 (267)
T d2dy1a2 132 GGDYYALLEDLRSTLG 147 (267)
T ss_dssp CCCHHHHHHHHHHHHC
T ss_pred cccchhhhhhHHHHhc
Confidence 54433 3444555556
No 50
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.84 E-value=3.3e-05 Score=63.54 Aligned_cols=42 Identities=12% Similarity=0.055 Sum_probs=33.2
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHh-HhhhCCCeEEEecccC
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLAN-YFKKRKKSVLLAACDT 137 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag-~~~~~~g~V~l~~~d~ 137 (302)
+++|+++.|.|++|+||||++..++. .....+..+.+...+.
T Consensus 23 i~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~ 65 (242)
T d1tf7a1 23 LPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEE 65 (242)
T ss_dssp EETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSS
T ss_pred CcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccccC
Confidence 57999999999999999999876654 3445566788877654
No 51
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=97.84 E-value=5.5e-05 Score=64.44 Aligned_cols=72 Identities=21% Similarity=0.143 Sum_probs=45.7
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHH
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAIN 175 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la 175 (302)
+..+.-+.|.||+|+|||++++.||..+.. --+.+...++.. ...+ +......+.+.
T Consensus 42 ~~~~~~iLL~GppGtGKT~la~~iA~~~~~--~~~~i~~~~l~~--------------------~~~g-~~~~~l~~~f~ 98 (256)
T d1lv7a_ 42 GKIPKGVLMVGPPGTGKTLLAKAIAGEAKV--PFFTISGSDFVE--------------------MFVG-VGASRVRDMFE 98 (256)
T ss_dssp -CCCCEEEEECCTTSCHHHHHHHHHHHHTC--CEEEECSCSSTT--------------------SCCC-CCHHHHHHHHH
T ss_pred CCCCCeEEeeCCCCCCccHHHHHHHHHcCC--CEEEEEhHHhhh--------------------cchh-HHHHHHHHHHH
Confidence 344566889999999999999999987632 123333333211 0011 11234455667
Q ss_pred HHHhCCCCeEEEcCC
Q psy2881 176 IAQKKNTDIVIVDTS 190 (302)
Q Consensus 176 ~al~~~~~llllDEP 190 (302)
.|....|-+|++||-
T Consensus 99 ~A~~~~P~il~iDei 113 (256)
T d1lv7a_ 99 QAKKAAPCIIFIDEI 113 (256)
T ss_dssp HHHTTCSEEEEETTH
T ss_pred HHHHcCCEEEEEECh
Confidence 777888999999987
No 52
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=97.82 E-value=2.8e-05 Score=63.93 Aligned_cols=125 Identities=13% Similarity=0.074 Sum_probs=64.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhC--CCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKR--KKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQ 178 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~--~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al 178 (302)
.++++|.-++|||||+..|.+..... .|++..... ......|+-+-. -.........
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~~g~~~~~~~~~~~~~--~d~~~eE~~rgi--Ti~~~~~~~~----------------- 63 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGD--IDKAPEERARGI--TINTAHVEYE----------------- 63 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHSCTTSCCCCHHH--HSCSHHHHHHTC--CCSCEEEEEE-----------------
T ss_pred EEEEEeCCCCcHHHHHHHHHHHhhhccCCcchhhhhh--cccchHHhcCCe--EEEeeEEEEE-----------------
Confidence 38999999999999999997655422 233321110 001111221111 1111111111
Q ss_pred hCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhH-HHHHHHHHhhcCCCe-E-EEecCC
Q psy2881 179 KKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNT-LSQIKEFSKILRITG-L-IITKLD 255 (302)
Q Consensus 179 ~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~-~~~~~~f~~~~~~~~-~-i~tk~d 255 (302)
-.+..+-|+|+||-.....+ .++.+ -...-..+|+++..|... -.+.-.+....++.. + ++||+|
T Consensus 64 ~~~~~i~iiDtPGh~df~~~---~~~~~---------~~aD~avlVvda~~Gv~~qt~~~~~~~~~~gi~~iiv~iNK~D 131 (204)
T d2c78a3 64 TAKRHYSHVDCPGHADYIKN---MITGA---------AQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVD 131 (204)
T ss_dssp CSSCEEEEEECCCSGGGHHH---HHHHH---------TTCSSEEEEEETTTCCCHHHHHHHHHHHHTTCCCEEEEEECGG
T ss_pred eCCeEEEEEeCCCchhhHHH---HHHHH---------HHCCEEEEEEECCCCCcHHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 24578999999993322222 22222 124456788888888632 122233344566643 4 479999
Q ss_pred CCC
Q psy2881 256 GTT 258 (302)
Q Consensus 256 ~~~ 258 (302)
...
T Consensus 132 ~~~ 134 (204)
T d2c78a3 132 MVD 134 (204)
T ss_dssp GCC
T ss_pred cCC
Confidence 643
No 53
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.81 E-value=4.3e-05 Score=61.04 Aligned_cols=35 Identities=29% Similarity=0.309 Sum_probs=26.7
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
.+++.++.++|++||||||+++.++.. .|-+.+..
T Consensus 11 ~~~p~liil~G~pGsGKST~a~~l~~~----~~~~~i~~ 45 (172)
T d1yj5a2 11 SPNPEVVVAVGFPGAGKSTFIQEHLVS----AGYVHVNR 45 (172)
T ss_dssp CSSCCEEEEECCTTSSHHHHHHHHTGG----GTCEEEEH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHh----cCCEEEch
Confidence 467889999999999999999887542 34455544
No 54
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.79 E-value=1.8e-05 Score=63.43 Aligned_cols=41 Identities=27% Similarity=0.334 Sum_probs=32.5
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccC
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDT 137 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~ 137 (302)
..+-+|+|-||+||||||+++.|+..+...+-.+.....+.
T Consensus 20 ~~~~iIgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~~~~ 60 (198)
T d1rz3a_ 20 AGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDD 60 (198)
T ss_dssp SSSEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEGGG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHhccccccceeccccc
Confidence 34568999999999999999999998887665665555443
No 55
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=97.77 E-value=9.3e-05 Score=63.22 Aligned_cols=90 Identities=17% Similarity=0.163 Sum_probs=52.7
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEeccc-CCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHH
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD-TFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAI 174 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d-~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (302)
++.|.++-|.||+|+||||++-.++......++.+.+.+.. .++... ++.++-...--++.... .. +...+.+
T Consensus 51 i~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~---a~~~Gvd~d~v~~~~~~--~~-E~~~~~i 124 (263)
T d1u94a1 51 LPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIY---ARKLGVDIDNLLCSQPD--TG-EQALEIC 124 (263)
T ss_dssp EETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHH---HHHTTCCGGGCEEECCS--SH-HHHHHHH
T ss_pred ccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHH---HHHhCCCHHHEEEecCC--CH-HHHHHHH
Confidence 45789999999999999999999988887777776665544 443322 22222111101122211 22 2222322
Q ss_pred HHH-HhCCCCeEEEcCCC
Q psy2881 175 NIA-QKKNTDIVIVDTSG 191 (302)
Q Consensus 175 a~a-l~~~~~llllDEP~ 191 (302)
... ...+++++++|--+
T Consensus 125 ~~l~~~~~~~liViDSi~ 142 (263)
T d1u94a1 125 DALARSGAVDVIVVDSVA 142 (263)
T ss_dssp HHHHHHTCCSEEEEECGG
T ss_pred HHHHhcCCCCEEEEECcc
Confidence 221 23678999999764
No 56
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=97.76 E-value=1.8e-05 Score=66.21 Aligned_cols=29 Identities=24% Similarity=0.263 Sum_probs=22.9
Q ss_pred ceecCCCeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 93 IFKKCKPFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 93 ~l~~~~g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
++.+. ++++.|.|||.+||||+++.++-.
T Consensus 30 di~~~-~~~~iiTGpN~~GKSt~lk~i~l~ 58 (224)
T d1ewqa2 30 DLEMA-HELVLITGPNMAGKSTFLRQTALI 58 (224)
T ss_dssp EEEES-SCEEEEESCSSSSHHHHHHHHHHH
T ss_pred eEEeC-CcEEEEECCCccccchhhhhhHHH
Confidence 34443 358899999999999999988754
No 57
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=97.76 E-value=2.2e-05 Score=66.40 Aligned_cols=51 Identities=22% Similarity=0.257 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHHHHhhccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 69 NTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 69 ~~~~~~~~l~~~l~~~l~~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
++.+++..+.+.+....... -....+..+.|.||+||||||+++.||+.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-----~~~~~P~~ilL~GpPGtGKT~la~~la~~~~ 57 (273)
T d1gvnb_ 7 TDKQFENRLNDNLEELIQGK-----KAVESPTAFLLGGQPGSGKTSLRSAIFEETQ 57 (273)
T ss_dssp CHHHHHHHHHHHHHHHHTTC-----CCCSSCEEEEEECCTTSCTHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHhcc-----cCCCCCEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 45566666666665554322 1335677899999999999999999999774
No 58
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.76 E-value=9e-06 Score=63.99 Aligned_cols=27 Identities=22% Similarity=0.511 Sum_probs=25.1
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
+.+.++.|.||+||||||+.+.|+..+
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~l 30 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQL 30 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 578999999999999999999999876
No 59
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.74 E-value=9.4e-06 Score=64.02 Aligned_cols=30 Identities=20% Similarity=0.341 Sum_probs=26.9
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhC
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKR 126 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~ 126 (302)
.+|.+|.|+|++||||||+.+.|+..+...
T Consensus 4 ~~g~~I~l~G~~GsGKTTia~~La~~L~~~ 33 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGKDAIARALQVTLNQQ 33 (183)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHhhc
Confidence 579999999999999999999999888643
No 60
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.74 E-value=6.1e-06 Score=66.42 Aligned_cols=27 Identities=26% Similarity=0.390 Sum_probs=24.2
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhh
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKK 125 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~ 125 (302)
|.++.|+||+||||||+++.|...++.
T Consensus 2 G~iivl~GpsG~GK~tl~~~L~~~~~~ 28 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVVRCLRERIPN 28 (182)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CeEEEEECCCCCCHHHHHHHHHhhCCC
Confidence 789999999999999999999877653
No 61
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=97.70 E-value=1.5e-05 Score=68.04 Aligned_cols=23 Identities=30% Similarity=0.687 Sum_probs=20.6
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
=.++|+|.+|||||||++.|.|.
T Consensus 33 l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTS
T ss_pred cEEEEECCCCCcHHHHHHHHhCC
Confidence 36889999999999999999874
No 62
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.68 E-value=9.9e-06 Score=63.89 Aligned_cols=26 Identities=31% Similarity=0.406 Sum_probs=23.3
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
.|+++.|.||+||||||+.+.|+..+
T Consensus 3 ~g~iI~l~G~~GsGKSTia~~La~~l 28 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAEALANLP 28 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHHHHHTCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 48999999999999999999998654
No 63
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=97.66 E-value=0.00015 Score=62.23 Aligned_cols=143 Identities=16% Similarity=0.209 Sum_probs=68.4
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhh--CCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHH
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKK--RKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIA 177 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~--~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~a 177 (302)
..++|+|+.|+|||||+-.|...-.. .-|+|. .+..+......+ +..++........ .
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g~~~~~g~v~-~~~~~~D~~~~E------~~r~~si~~~~~~-------------~ 66 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVH-EGAATMDFMEQE------RERGITITAAVTT-------------C 66 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHTSSCC--------------------------CCCCCCCSEEE-------------E
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhcCcccccccee-cCceEEeccHHH------HhcCCccccceee-------------e
Confidence 46899999999999999988654332 224442 111111111111 1112211110000 0
Q ss_pred HhCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHHH-HHHHHhhcCCC-eEEEecCC
Q psy2881 178 QKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQ-IKEFSKILRIT-GLIITKLD 255 (302)
Q Consensus 178 l~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~~-~~~f~~~~~~~-~~i~tk~d 255 (302)
--.+..+-|+|+||......+....|. +..-..+|+++..|.+.-.. .=.....+++. .+++||+|
T Consensus 67 ~~~~~~~n~iDtPG~~dF~~e~~~~l~------------~~D~avlVvda~~Gv~~~T~~~w~~a~~~~lP~i~fINKmD 134 (276)
T d2bv3a2 67 FWKDHRINIIDAPGHVDFTIEVERSMR------------VLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMD 134 (276)
T ss_dssp EETTEEEEEECCCSSSSCSTTHHHHHH------------HCCEEEEEEETTTSSCHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred ccCCeEEEEecCCchhhhHHHHHHHHH------------hhhheEEeccccCCcchhHHHHHHHHHHcCCCEEEEEeccc
Confidence 124568999999993333222322221 12345678888888643322 22333344443 45779999
Q ss_pred CC-Cchh-HHHHhhhHhCCce
Q psy2881 256 GT-TKGG-ILAAIAKKYSIPL 274 (302)
Q Consensus 256 ~~-~~~g-~~~~~~~~~~~pv 274 (302)
.. +.+. .+-++...++.++
T Consensus 135 r~~ad~~~~l~ei~~~l~~~~ 155 (276)
T d2bv3a2 135 KTGADLWLVIRTMQERLGARP 155 (276)
T ss_dssp STTCCHHHHHHHHHHTTCCCE
T ss_pred ccccccchhHHHHHHHhCCCe
Confidence 83 3444 4445555566443
No 64
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.63 E-value=1.1e-05 Score=63.83 Aligned_cols=25 Identities=32% Similarity=0.501 Sum_probs=22.9
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
...|+|+||.||||||+++.|+..+
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHh
Confidence 3679999999999999999999876
No 65
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.63 E-value=0.0002 Score=59.42 Aligned_cols=173 Identities=14% Similarity=0.163 Sum_probs=85.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHH-HHHh---cccCCCCeeecCCCCCHHHHHHHHHHH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQ-LLIL---GKYNDVPVISEKKITDPAAIAFNAINI 176 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~q-l~~~---~~~~~~~~~~~~~~~~~~~~~~~~la~ 176 (302)
++.|.|.=|||||||++.+... +.+.+|.+.-.|....+.-.. +... .....-.........+........+.+
T Consensus 5 v~iitGFLGaGKTTll~~lL~~--~~~~riaVI~Ne~g~~~iD~~~~~~~~~~~~el~~gcicc~~~~~~~~~l~~~~~~ 82 (222)
T d1nija1 5 VTLLTGFLGAGKTTLLRHILNE--QHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDN 82 (222)
T ss_dssp EEEEEESSSSSCHHHHHHHHHS--CCCCCEEEECSSCCSCCEEEEEECTTSCEEEEETTSCEEECTTSCHHHHHHHHHHH
T ss_pred EEEEeeCCCCCHHHHHHHHHhc--CCCCcEEEEEecccchhhhhhhhcccccceEEecCCcceeccchhHHHHHHHHHHH
Confidence 6889999999999999988763 345577776555322110000 0000 000111222232333443333333333
Q ss_pred HHh--CCCCeEEEcCCC--CccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHHHHHHHHh-hcCCCeEEE
Q psy2881 177 AQK--KNTDIVIVDTSG--RLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSK-ILRITGLII 251 (302)
Q Consensus 177 al~--~~~~llllDEP~--d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~~~~~f~~-~~~~~~~i~ 251 (302)
... .+|+.+++-..| ++.. ++..+..-... .....-+-+..++++..+.........+.+ .-..|.+++
T Consensus 83 ~~~~~~~~d~iiIE~sG~~~p~~---l~~~~~~~~~~---~~~~~l~~vi~vVDa~~~~~~~~~~~~~~~Qi~~AD~ivl 156 (222)
T d1nija1 83 LDKGNIQFDRLVIECTGMADPGP---IIQTFFSHEVL---CQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILL 156 (222)
T ss_dssp HHHTSCCCSEEEEEEETTCCHHH---HHHHHHHSHHH---HHHEEEEEEEEEEETTTHHHHHHHCHHHHHHHHTCSEEEE
T ss_pred HhhccCCcceeEEeecccchhhH---HHHHHHhhhcc---cccccccchhhhhhhhhhhhhhhhhHHHHHHHHhCCcccc
Confidence 222 468999997666 4332 33333211000 000112334556676655433332222222 223578999
Q ss_pred ecCCCCCchhHHHHhhhHh--CCceEEEecCC
Q psy2881 252 TKLDGTTKGGILAAIAKKY--SIPLYFIGIGE 281 (302)
Q Consensus 252 tk~d~~~~~g~~~~~~~~~--~~pv~~~~~gq 281 (302)
||.|-......+...+... +.||.....|+
T Consensus 157 NK~Dl~~~~~~~~~~l~~lNP~a~Ii~~~~g~ 188 (222)
T d1nija1 157 TKTDVAGEAEKLHERLARINARAPVYTVTHGD 188 (222)
T ss_dssp ECTTTCSCTHHHHHHHHHHCSSSCEEECCSSC
T ss_pred cccccccHHHHHHHHHHHHhCCCeEEEeeCCc
Confidence 9999755444455555554 35777766665
No 66
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=97.63 E-value=2.4e-05 Score=65.10 Aligned_cols=36 Identities=33% Similarity=0.601 Sum_probs=29.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDT 137 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~ 137 (302)
+++|+||.|||||||++.|...+. .++++.+.+.|+
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~-~~~~~~ivn~d~ 37 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLE-DNYKVAYVNLDT 37 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHT-TTSCEEEEECCS
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHh-hCCeEEEEecCc
Confidence 689999999999999999987654 556677766554
No 67
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.58 E-value=0.00018 Score=61.50 Aligned_cols=86 Identities=16% Similarity=0.201 Sum_probs=54.7
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEeccc-CCChhHHHHHHHhcccCCCC----eeecCCCCCHHHHH
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD-TFRAAAYEQLLILGKYNDVP----VISEKKITDPAAIA 170 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d-~~~~~~~~ql~~~~~~~~~~----~~~~~~~~~~~~~~ 170 (302)
++.|.++-|.||+|+||||++-.++......+|.+.+.+.. .++.. +++.+|+. ++... ... +..
T Consensus 54 ip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~-------~a~~~Gvd~d~i~~~~~--~~~-E~~ 123 (268)
T d1xp8a1 54 IPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPV-------YARALGVNTDELLVSQP--DNG-EQA 123 (268)
T ss_dssp EETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHH-------HHHHTTCCGGGCEEECC--SSH-HHH
T ss_pred ccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHH-------HHHHhCCCchhEEEEcC--CCH-HHH
Confidence 46789999999999999999999999888778888777655 34432 22333322 12221 122 223
Q ss_pred HHHHHHHH-hCCCCeEEEcCCC
Q psy2881 171 FNAINIAQ-KKNTDIVIVDTSG 191 (302)
Q Consensus 171 ~~~la~al-~~~~~llllDEP~ 191 (302)
.+.+.... ..+++++++|.-+
T Consensus 124 ~~~~~~l~~~~~~~liIiDSi~ 145 (268)
T d1xp8a1 124 LEIMELLVRSGAIDVVVVDSVA 145 (268)
T ss_dssp HHHHHHHHTTTCCSEEEEECTT
T ss_pred HHHHHHHHhcCCCcEEEEeccc
Confidence 33332222 2468999999875
No 68
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=97.57 E-value=0.00043 Score=56.05 Aligned_cols=38 Identities=18% Similarity=0.029 Sum_probs=33.6
Q ss_pred eEEEEEcCC-CCCHHHHHHHHHhHhhhCCCeEEEecccC
Q psy2881 100 FVIMIVGVN-GVGKTTTIGKLANYFKKRKKSVLLAACDT 137 (302)
Q Consensus 100 ~ii~lvGpn-GsGKTTll~~Lag~~~~~~g~V~l~~~d~ 137 (302)
+.+.|.|-+ |+||||+...||..+...+.+|.+.+.|.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~d~ 40 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVA 40 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECSEE
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECccc
Confidence 467899996 99999999999999999999999987654
No 69
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.56 E-value=1.5e-05 Score=63.93 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=28.2
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeE
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V 130 (302)
+|.+|.|+|++||||||+.+.|+..+....-..
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~l~~~~~~~ 50 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPC 50 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCc
Confidence 688999999999999999999999887554433
No 70
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.56 E-value=2.5e-05 Score=63.10 Aligned_cols=37 Identities=35% Similarity=0.484 Sum_probs=29.2
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccC
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDT 137 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~ 137 (302)
.+|.+|+|+||.||||||+.+.||..+ |-+.+...+.
T Consensus 4 ~kp~iI~i~G~pGSGKsT~a~~La~~~----g~~~i~~g~~ 40 (194)
T d1qf9a_ 4 SKPNVVFVLGGPGSGKGTQCANIVRDF----GWVHLSAGDL 40 (194)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHHHH----CCEEEEHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHH----CCceEchhhH
Confidence 567899999999999999999999765 4455554443
No 71
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.54 E-value=0.00018 Score=65.06 Aligned_cols=24 Identities=25% Similarity=0.389 Sum_probs=21.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
-|+|+|.+|||||||++.|.|.-.
T Consensus 58 ~Iai~G~~n~GKSSLiNaL~G~~~ 81 (400)
T d1tq4a_ 58 NVAVTGETGSGKSSFINTLRGIGN 81 (400)
T ss_dssp EEEEEECTTSSHHHHHHHHHTCCT
T ss_pred EEEEECCCCCCHHHHHHHHhCCCc
Confidence 489999999999999999998643
No 72
>d1wgwa_ a.24.13.1 (A:) Signal recognition particle 54 kDa protein, SRP54 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.53 E-value=8.9e-05 Score=53.62 Aligned_cols=76 Identities=21% Similarity=0.315 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHhhhcCcCCh----HHHHHHHHHHHHCCCChHHHHHHHHHHHHHHhcCCCC----CHHHHHHHHHH
Q psy2881 8 RLKESLSKTACNLKSLIVNKKIDK----NLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLF----NTEQVRNVLHN 79 (302)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~ 79 (302)
.|.+++.+. +.++.+...+++ +.+.+++.+|+++||+..+++.+.+.+++.+.+++.. ..+.+..++.+
T Consensus 9 ~L~~~i~~a---~~~l~~~~~i~E~~I~~~l~eI~~ALLeADVn~~vV~~f~~~Ik~k~~~~~~~~g~n~~q~i~kiV~d 85 (99)
T d1wgwa_ 9 DLGRKITSA---LRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFK 85 (99)
T ss_dssp HHHHHHHHH---HHHHHHCSSCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSCCSSCCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHH---HHHHhCCCCCCHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHHHH
Confidence 455555444 333334456886 4678999999999999999999999999988776643 34778888888
Q ss_pred HHHHHhh
Q psy2881 80 LLVNLLK 86 (302)
Q Consensus 80 ~l~~~l~ 86 (302)
+|.+++.
T Consensus 86 ELv~ll~ 92 (99)
T d1wgwa_ 86 ELVKVKV 92 (99)
T ss_dssp HHHHSSC
T ss_pred HHHHHcC
Confidence 8888765
No 73
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=97.53 E-value=4.1e-05 Score=60.83 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=28.3
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEe
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLA 133 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~ 133 (302)
.++.|.|++||||||++++|+..+...+-++...
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~ 35 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKII 35 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 4788899999999999999999998666556543
No 74
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.53 E-value=8.9e-05 Score=63.02 Aligned_cols=71 Identities=23% Similarity=0.255 Sum_probs=43.0
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINI 176 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 176 (302)
.++.-+.|.||.|+|||++++.+|.... ..+....... + .... ...........+..
T Consensus 36 ~~~~giLL~GppGtGKT~l~~ala~~~~---~~~~~i~~~~--------l--~~~~----------~g~~~~~l~~~f~~ 92 (258)
T d1e32a2 36 KPPRGILLYGPPGTGKTLIARAVANETG---AFFFLINGPE--------I--MSKL----------AGESESNLRKAFEE 92 (258)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHHHTT---CEEEEECHHH--------H--TTSC----------TTHHHHHHHHHHHH
T ss_pred CCCceeEEecCCCCCchHHHHHHHHHhC---CeEEEEEchh--------h--cccc----------cccHHHHHHHHHHH
Confidence 3444588999999999999999998643 3343332110 0 0000 01112233344556
Q ss_pred HHhCCCCeEEEcCC
Q psy2881 177 AQKKNTDIVIVDTS 190 (302)
Q Consensus 177 al~~~~~llllDEP 190 (302)
|....|-+|++||-
T Consensus 93 A~~~~p~il~iDei 106 (258)
T d1e32a2 93 AEKNAPAIIFIDEL 106 (258)
T ss_dssp HHHTCSEEEEESSG
T ss_pred HHhcCCeEEEehhh
Confidence 67788999999997
No 75
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.52 E-value=2.5e-05 Score=61.40 Aligned_cols=27 Identities=33% Similarity=0.431 Sum_probs=23.9
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
++|-.+.|.||+||||||+.+.|+..+
T Consensus 3 pk~~~I~i~G~~GsGKTT~~~~La~~l 29 (174)
T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAAEL 29 (174)
T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHh
Confidence 467789999999999999999999765
No 76
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.51 E-value=2.6e-05 Score=61.21 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=23.4
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
..+|.|.||+||||||+.+.|+..+.
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~ 28 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcC
Confidence 46899999999999999999998874
No 77
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.51 E-value=2.5e-05 Score=60.97 Aligned_cols=32 Identities=34% Similarity=0.510 Sum_probs=25.3
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
.++.|.||+||||||+++.|+..+ ++.+.+.+
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~---~~~~~~~~ 34 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQL---DNSAYIEG 34 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHS---SSEEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHc---CCCEEEeh
Confidence 578999999999999999999765 34455443
No 78
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=97.50 E-value=0.00015 Score=60.34 Aligned_cols=24 Identities=21% Similarity=0.333 Sum_probs=21.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+++|+|...||||||++.|.+...
T Consensus 7 ~IaIiGh~d~GKSTL~~~L~~~~~ 30 (227)
T d1g7sa4 7 IVSVLGHVDHGKTTLLDHIRGSAV 30 (227)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCccHHHHHHHHHhhcc
Confidence 699999999999999999988643
No 79
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.50 E-value=0.00027 Score=60.45 Aligned_cols=91 Identities=16% Similarity=0.181 Sum_probs=56.0
Q ss_pred ecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEeccc-CCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHH
Q psy2881 95 KKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD-TFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNA 173 (302)
Q Consensus 95 ~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d-~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (302)
-++.|.++-|.||+|+||||++-.++......++.+.+.+.. .++....+++..-.+ .+ ++.... . .+.+.+.
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~GvD~d--~i-l~~~~~--~-~E~~~~~ 129 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTD--SL-LVSQPD--T-GEQALEI 129 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHHTCCGG--GC-EEECCS--S-HHHHHHH
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHhCCCHH--He-EEecCC--C-HHHHHHH
Confidence 357899999999999999999988888888888887776544 344433333321111 11 122211 1 2223332
Q ss_pred HHHH-HhCCCCeEEEcCCC
Q psy2881 174 INIA-QKKNTDIVIVDTSG 191 (302)
Q Consensus 174 la~a-l~~~~~llllDEP~ 191 (302)
+... ...+++++++|.-+
T Consensus 130 ~~~l~~~~~~~liIiDSi~ 148 (269)
T d1mo6a1 130 ADMLIRSGALDIVVIDSVA 148 (269)
T ss_dssp HHHHHHTTCEEEEEEECST
T ss_pred HHHHHhcCCCCEEEEeccc
Confidence 2221 23568999999876
No 80
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=97.49 E-value=2.9e-05 Score=59.85 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=24.6
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
+++.|.||+||||||+++.|+. ...+.+.+...
T Consensus 3 klIii~G~pGsGKTTla~~L~~---~~~~~~~~~~d 35 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIA---KNPGFYNINRD 35 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH---HSTTEEEECHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH---hCCCCEEechH
Confidence 5788999999999999998754 33455555443
No 81
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=97.47 E-value=2.8e-05 Score=67.87 Aligned_cols=31 Identities=26% Similarity=0.343 Sum_probs=24.6
Q ss_pred cceecCCCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 92 LIFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 92 i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
+.+.+.+| +.+|+|||||||||++..|+-.+
T Consensus 20 ~~l~f~~~-lnvi~G~NGsGKS~il~AI~~~L 50 (329)
T g1xew.1 20 VVIPFSKG-FTAIVGANGSGKSNIGDAILFVL 50 (329)
T ss_dssp EEEECCSS-EEEEEECTTSSSHHHHHHHHHHT
T ss_pred EEEeCCCC-eEEEECCCCCCHHHHHHHHHHHH
Confidence 44555554 89999999999999999987544
No 82
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.47 E-value=2.9e-05 Score=59.94 Aligned_cols=23 Identities=39% Similarity=0.515 Sum_probs=20.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
.+.|+||+||||||+.+.||-.+
T Consensus 4 ~I~l~G~~GsGKSTvak~La~~L 26 (169)
T d1kaga_ 4 NIFLVGPMGAGKSTIGRQLAQQL 26 (169)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 47789999999999999999876
No 83
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.45 E-value=2.4e-05 Score=65.36 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=24.7
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEE
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVL 131 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~ 131 (302)
+|+..+|+|++|+|||||++.|.+-.....|.|.
T Consensus 94 ~~kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~vs 127 (225)
T d1u0la2 94 KGKISTMAGLSGVGKSSLLNAINPGLKLRVSEVS 127 (225)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHSTTCCCC-----
T ss_pred cCCeEEEECCCCCCHHHHHHhhcchhhhhccCcc
Confidence 4789999999999999999999876544444443
No 84
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=97.38 E-value=2.1e-06 Score=69.07 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=26.1
Q ss_pred CcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 91 PLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 91 ~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+.++++.+| ++.|+|||||||||++..|.-.+-
T Consensus 17 ~~~i~f~~~-~tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 17 ARTFDLDEL-VTTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp EEEECHHHH-HHHHHSCCSHHHHHHHHHHHHHHS
T ss_pred eEEEEcCCC-eEEEECCCCCCHHHHHHHHHHHhc
Confidence 345555544 888999999999999999987654
No 85
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.38 E-value=0.00016 Score=59.36 Aligned_cols=40 Identities=23% Similarity=0.241 Sum_probs=34.1
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEeccc
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD 136 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d 136 (302)
.+|.+|+|-|+-||||||+++.|+..+...+-+|.+...+
T Consensus 1 ~rG~lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~~p 40 (209)
T d1nn5a_ 1 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 40 (209)
T ss_dssp CCCCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3688999999999999999999999998877777765433
No 86
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=97.37 E-value=0.00012 Score=63.99 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=27.2
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEeccc
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD 136 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d 136 (302)
++.-+.|+||+|||||++++.||..+. .--+.+....
T Consensus 48 ~~~~iLl~GPpG~GKT~lAkalA~~~~--~~~~~i~~s~ 84 (309)
T d1ofha_ 48 TPKNILMIGPTGVGKTEIARRLAKLAN--APFIKVEATK 84 (309)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHHT--CCEEEEEGGG
T ss_pred CCceEEEECCCCCCHHHHHHHHhhccc--cchhcccccc
Confidence 445677999999999999999998764 2234555444
No 87
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.36 E-value=4.7e-05 Score=59.51 Aligned_cols=22 Identities=45% Similarity=0.558 Sum_probs=19.8
Q ss_pred EEEEcCCCCCHHHHHHHHHhHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~ 123 (302)
++|+||.||||||+.+.|+-.+
T Consensus 7 I~i~G~pGsGKTTia~~La~~l 28 (173)
T d1rkba_ 7 ILLTGTPGVGKTTLGKELASKS 28 (173)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6699999999999999998765
No 88
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.35 E-value=6.1e-05 Score=60.88 Aligned_cols=37 Identities=35% Similarity=0.399 Sum_probs=29.2
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccC
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDT 137 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~ 137 (302)
++-.+++|+||.||||||..+.|+..+ |-+.+...|.
T Consensus 6 ~~~~iI~i~GppGSGKsT~a~~La~~~----g~~~is~gdl 42 (196)
T d1ukza_ 6 DQVSVIFVLGGPGAGKGTQCEKLVKDY----SFVHLSAGDL 42 (196)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHHHS----SCEEEEHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHh----CCeEEehhHH
Confidence 455789999999999999999999876 4455654444
No 89
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.35 E-value=5.2e-05 Score=62.38 Aligned_cols=27 Identities=19% Similarity=0.277 Sum_probs=23.8
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
.|.++.|+||+||||||+++.|....+
T Consensus 1 ~G~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 1 QGTLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHhhCC
Confidence 488999999999999999999887654
No 90
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.34 E-value=4.4e-05 Score=65.89 Aligned_cols=44 Identities=14% Similarity=0.174 Sum_probs=29.1
Q ss_pred hCCCCeEEEcCCC---CccchHHHHHHHHHHHHHhchhhccccceeehh
Q psy2881 179 KKNTDIVIVDTSG---RLSTQSHLMRELKKIKKVIEKKIFELPYEIFLI 224 (302)
Q Consensus 179 ~~~~~llllDEP~---d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lv 224 (302)
...+.++++|||- ++.....+.+.|++..+ +.-++++||...++
T Consensus 239 ~~~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~--~~QviitTHsp~~~ 285 (308)
T d1e69a_ 239 IKPSPFYVLDEVDSPLDDYNAERFKRLLKENSK--HTQFIVITHNKIVM 285 (308)
T ss_dssp TSCCSEEEEESCCSSCCHHHHHHHHHHHHHHTT--TSEEEEECCCTTGG
T ss_pred hccCchhhhhhccccCCHHHHHHHHHHHHHhcc--CCEEEEEECCHHHH
Confidence 4566788888884 66667777777776653 23456777866553
No 91
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=97.34 E-value=7.6e-05 Score=63.11 Aligned_cols=71 Identities=18% Similarity=0.124 Sum_probs=42.9
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHH
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIA 177 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~a 177 (302)
+..-+.|.||.|+|||++++.||..... --+.+.+.+.. .............+.+..|
T Consensus 39 p~~~vLL~GppGtGKT~la~alA~~~~~--~~~~i~~~~~~--------------------~g~~~~~~~~~i~~if~~A 96 (246)
T d1d2na_ 39 PLVSVLLEGPPHSGKTALAAKIAEESNF--PFIKICSPDKM--------------------IGFSETAKCQAMKKIFDDA 96 (246)
T ss_dssp SEEEEEEECSTTSSHHHHHHHHHHHHTC--SEEEEECGGGC--------------------TTCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECcCCCCHHHHHHHHhhcccc--ccccccccccc--------------------ccccccchhhhhhhhhhhh
Confidence 4456889999999999999999986531 11333322211 0000111122334456667
Q ss_pred HhCCCCeEEEcCC
Q psy2881 178 QKKNTDIVIVDTS 190 (302)
Q Consensus 178 l~~~~~llllDEP 190 (302)
....|-+|++||-
T Consensus 97 ~~~~p~il~iDEi 109 (246)
T d1d2na_ 97 YKSQLSCVVVDDI 109 (246)
T ss_dssp HTSSEEEEEECCH
T ss_pred hhcccceeehhhh
Confidence 7778899999995
No 92
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=97.33 E-value=9.8e-05 Score=64.47 Aligned_cols=42 Identities=33% Similarity=0.513 Sum_probs=35.2
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhh--CCCeEEEecccCC
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKK--RKKSVLLAACDTF 138 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~--~~g~V~l~~~d~~ 138 (302)
+.+-++||.|++||||||+.+.|..++.. .+-+|.+...|-|
T Consensus 78 k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 78 RIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeee
Confidence 45689999999999999999999999873 4567888877755
No 93
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=97.33 E-value=0.00043 Score=60.52 Aligned_cols=69 Identities=13% Similarity=0.188 Sum_probs=46.0
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQ 178 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al 178 (302)
..++.++||.|+|||.+.+.||+.+...-.-+.+.+.++.. .+..+....+++.+..|.
T Consensus 123 ~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~---------------------~~~G~~e~~~~~~f~~a~ 181 (321)
T d1w44a_ 123 SGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLS---------------------GYNTDFNVFVDDIARAML 181 (321)
T ss_dssp SEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSST---------------------TCBCCHHHHHHHHHHHHH
T ss_pred CceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhh---------------------cccchHHHHHHHHHHHHh
Confidence 34666789999999999999999875333345666655431 122244445555555554
Q ss_pred hCCCCeEEEcCC
Q psy2881 179 KKNTDIVIVDTS 190 (302)
Q Consensus 179 ~~~~~llllDEP 190 (302)
+|.+|++||-
T Consensus 182 --~~~ilf~DEi 191 (321)
T d1w44a_ 182 --QHRVIVIDSL 191 (321)
T ss_dssp --HCSEEEEECC
T ss_pred --hccEEEeehh
Confidence 4789999997
No 94
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=97.30 E-value=0.00046 Score=51.51 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=27.7
Q ss_pred cCCCeEEEEEcCCCCCHHHHH-HHHHhHhhhCCCeEEEec
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTI-GKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll-~~Lag~~~~~~g~V~l~~ 134 (302)
+++|+.+.|.+|+|||||+.+ ..+.......+..+.+..
T Consensus 4 l~~~~~~il~~~tGsGKT~~~~~~~~~~~~~~~~~vli~~ 43 (140)
T d1yksa1 4 LKKGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLA 43 (140)
T ss_dssp TSTTCEEEECCCTTSSTTTTHHHHHHHHHHHTTCCEEEEE
T ss_pred HHcCCcEEEEcCCCCChhHHHHHHHHHHhhhcCceeeeee
Confidence 367899999999999999665 344445555566666654
No 95
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.30 E-value=0.00019 Score=61.17 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=46.1
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHH
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAIN 175 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la 175 (302)
+.++.-+.|.||+|+|||++++.+|+.+. -.+..... + .+ .. ....+........+.
T Consensus 38 ~~~~~giLL~Gp~GtGKT~l~~ala~~~~---~~~~~~~~-----~---~l--~~----------~~~~~~~~~l~~~f~ 94 (265)
T d1r7ra3 38 MTPSKGVLFYGPPGCGKTLLAKAIANECQ---ANFISIKG-----P---EL--LT----------MWFGESEANVREIFD 94 (265)
T ss_dssp CCCCCEEEEBCCTTSSHHHHHHHHHHHTT---CEEEEECH-----H---HH--HT----------SCTTTHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCcchhHHHHHHHHhC---CcEEEEEH-----H---Hh--hh----------ccccchHHHHHHHHH
Confidence 34455688999999999999999999873 22322211 0 00 00 111233334445566
Q ss_pred HHHhCCCCeEEEcCC
Q psy2881 176 IAQKKNTDIVIVDTS 190 (302)
Q Consensus 176 ~al~~~~~llllDEP 190 (302)
.|....|-+|++||-
T Consensus 95 ~A~~~~p~il~idei 109 (265)
T d1r7ra3 95 KARQAAPCVLFFDEL 109 (265)
T ss_dssp HHHHTCSEEEEESSG
T ss_pred HHHhcCCcceeHHhh
Confidence 777889999999997
No 96
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.29 E-value=0.00016 Score=60.36 Aligned_cols=35 Identities=26% Similarity=0.260 Sum_probs=26.6
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
+...+.|.||+|+||||+++.||..+ +..+.....
T Consensus 51 ~~~~lll~GPpG~GKTt~a~~la~~~---~~~~~~~~~ 85 (253)
T d1sxja2 51 VFRAAMLYGPPGIGKTTAAHLVAQEL---GYDILEQNA 85 (253)
T ss_dssp SCSEEEEECSTTSSHHHHHHHHHHHT---TCEEEEECT
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHH---Hhhhhcccc
Confidence 33578899999999999999999865 344554433
No 97
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=97.26 E-value=0.00011 Score=62.20 Aligned_cols=69 Identities=23% Similarity=0.259 Sum_probs=41.9
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQ 178 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al 178 (302)
+.-+.|.||.|+|||++++.||..+. -.+..... ...... +..+....+.+.+..|.
T Consensus 42 ~~giLl~GppGtGKT~la~aia~~~~---~~~~~i~~-------~~l~~~-------------~~g~~~~~l~~~f~~a~ 98 (247)
T d1ixza_ 42 PKGVLLVGPPGVGKTHLARAVAGEAR---VPFITASG-------SDFVEM-------------FVGVGAARVRDLFETAK 98 (247)
T ss_dssp CSEEEEECCTTSSHHHHHHHHHHHTT---CCEEEEEH-------HHHHHS-------------CTTHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCChhHHHHHHHHHcC---CCEEEEEh-------HHhhhc-------------cccHHHHHHHHHHHHHH
Confidence 44588999999999999999998653 22322211 111110 00122233445556666
Q ss_pred hCCCCeEEEcCC
Q psy2881 179 KKNTDIVIVDTS 190 (302)
Q Consensus 179 ~~~~~llllDEP 190 (302)
...|-+|++||.
T Consensus 99 ~~~p~Ii~iDei 110 (247)
T d1ixza_ 99 RHAPCIVFIDEI 110 (247)
T ss_dssp TSSSEEEEEETH
T ss_pred HcCCEEEEEECh
Confidence 678889999985
No 98
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.24 E-value=6.5e-05 Score=60.71 Aligned_cols=38 Identities=29% Similarity=0.387 Sum_probs=29.6
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
.++.++.|+||.||||||..+.|+..+ |-+.+...+..
T Consensus 6 ~~~~iI~l~G~pGSGKsT~a~~La~~~----g~~~is~g~ll 43 (194)
T d3adka_ 6 KKSKIIFVVGGPGSGKGTQCEKIVQKY----GYTHLSTGDLL 43 (194)
T ss_dssp HTSCEEEEEECTTSSHHHHHHHHHHHT----CCEEEEHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHh----CCeeEeccHHH
Confidence 467899999999999999999998764 44556554443
No 99
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.24 E-value=0.00012 Score=59.84 Aligned_cols=39 Identities=26% Similarity=0.519 Sum_probs=29.9
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhC-----CCeEEEecccC
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKR-----KKSVLLAACDT 137 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~-----~g~V~l~~~d~ 137 (302)
|=++||.||+||||||+.+.|+..+... .-++.+...|-
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l~~~~~~~~~~~~~vi~~D~ 45 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDS 45 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHTTGGGSCGGGCSEEEEEGGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhchhccccCCCceEEEeccc
Confidence 5689999999999999999998877532 23466666653
No 100
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.22 E-value=0.0001 Score=59.23 Aligned_cols=37 Identities=35% Similarity=0.415 Sum_probs=27.9
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
+|-.+.|+||.||||||..+.||-.+ |=+.+...|..
T Consensus 2 ~~~riil~G~pGSGKsT~a~~La~~~----g~~~i~~gdll 38 (190)
T d1ak2a1 2 KGVRAVLLGPPGAGKGTQAPKLAKNF----CVCHLATGDML 38 (190)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHH----TCEEEEHHHHH
T ss_pred CccEEEEECCCCCCHHHHHHHHHHHh----CCeEEeHHHHH
Confidence 56667799999999999999999765 44555544544
No 101
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.21 E-value=0.00025 Score=57.84 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=28.7
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeE
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V 130 (302)
+|.+|+|-|+-||||||+++.|+..+...+.+.
T Consensus 1 rgkfIviEG~dGsGKsT~~~~L~~~L~~~g~~~ 33 (210)
T d4tmka_ 1 RSKYIVIEGLEGAGKTTARNVVVETLEQLGIRD 33 (210)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHhCCCCe
Confidence 588999999999999999999999988766443
No 102
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=97.16 E-value=0.00037 Score=58.10 Aligned_cols=31 Identities=29% Similarity=0.410 Sum_probs=25.9
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCC
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKK 128 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g 128 (302)
.+..+.|.||.|+||||+++.++..+....+
T Consensus 42 ~~~~lll~GppGtGKT~l~~~l~~~l~~~~~ 72 (276)
T d1fnna2 42 HYPRATLLGRPGTGKTVTLRKLWELYKDKTT 72 (276)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHHHHHTTSCC
T ss_pred CCCceEEECCCCCCHHHHHHHHHHHHhcccC
Confidence 3457889999999999999999998875443
No 103
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.16 E-value=0.00011 Score=65.85 Aligned_cols=27 Identities=22% Similarity=0.358 Sum_probs=22.9
Q ss_pred eecCCCeEEEEEcCCCCCHHHHHHHHH
Q psy2881 94 FKKCKPFVIMIVGVNGVGKTTTIGKLA 120 (302)
Q Consensus 94 l~~~~g~ii~lvGpnGsGKTTll~~La 120 (302)
+.+..+.+.+|+|||||||||++..|+
T Consensus 20 i~f~~~~l~~i~G~NGsGKS~ileAi~ 46 (427)
T d1w1wa_ 20 VGFGESNFTSIIGPNGSGKSNMMDAIS 46 (427)
T ss_dssp EECTTCSEEEEECSTTSSHHHHHHHHH
T ss_pred EeCCCCCEEEEECCCCCCHHHHHHHHH
Confidence 445556699999999999999999986
No 104
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=97.15 E-value=2.9e-05 Score=65.00 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=22.2
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEE
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVL 131 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~ 131 (302)
+|...+|+|++|+|||||++.|.+-.....|.|.
T Consensus 96 ~~~~~vl~G~SGVGKSSLiN~L~~~~~~~t~~vs 129 (231)
T d1t9ha2 96 QDKTTVFAGQSGVGKSSLLNAISPELGLRTNEIS 129 (231)
T ss_dssp TTSEEEEEESHHHHHHHHHHHHCC----------
T ss_pred ccceEEEECCCCccHHHHHHhhccHhHhhhcccc
Confidence 5778899999999999999999876544444443
No 105
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.14 E-value=0.00011 Score=57.61 Aligned_cols=22 Identities=36% Similarity=0.554 Sum_probs=20.5
Q ss_pred EEEEcCCCCCHHHHHHHHHhHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~ 123 (302)
+.|+|+.||||||+.+.||..+
T Consensus 3 I~liG~~GsGKsTi~k~La~~l 24 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDL 24 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6788999999999999999887
No 106
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=97.13 E-value=0.00027 Score=58.58 Aligned_cols=39 Identities=18% Similarity=0.255 Sum_probs=29.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAA 141 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~ 141 (302)
-+.|.||+|+||||+++.||..+... .+.+.+.+..+..
T Consensus 37 ~~L~~GPpGtGKT~lA~~la~~~~~~--~~~~~~~~~~~~~ 75 (238)
T d1in4a2 37 HVLLAGPPGLGKTTLAHIIASELQTN--IHVTSGPVLVKQG 75 (238)
T ss_dssp CEEEESSTTSSHHHHHHHHHHHHTCC--EEEEETTTCCSHH
T ss_pred eEEEECCCCCcHHHHHHHHHhccCCC--cccccCcccccHH
Confidence 36799999999999999999877543 3445566655443
No 107
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=97.13 E-value=0.00025 Score=60.54 Aligned_cols=42 Identities=31% Similarity=0.365 Sum_probs=38.5
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
+.+.++.+.|..|+||||+...||..+...+.+|.+.+.|+.
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~ 47 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 457799999999999999999999999999999999999974
No 108
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.12 E-value=9.7e-05 Score=60.81 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=30.4
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhh-CCCeEEEeccc
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKK-RKKSVLLAACD 136 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~-~~g~V~l~~~d 136 (302)
++|.++.|.|++||||||+.+.|+..+.. .+-.+.+.+.|
T Consensus 22 ~kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD 62 (208)
T d1m7ga_ 22 QRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGD 62 (208)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcch
Confidence 68999999999999999999999976643 33344444334
No 109
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=97.12 E-value=0.00077 Score=58.78 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhhccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 70 TEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 70 ~~~~~~~l~~~l~~~l~~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
++.+.+.+...+..... -+.+ .-.+..++.++||+|+|||.+.+.||..+-
T Consensus 28 Q~~ai~~v~~~i~~~~~-~l~~---~~kp~~~~lf~Gp~G~GKt~lak~la~~l~ 78 (315)
T d1qvra3 28 QDEAIRAVADAIRRARA-GLKD---PNRPIGSFLFLGPTGVGKTELAKTLAATLF 78 (315)
T ss_dssp CHHHHHHHHHHHHHHGG-GCSC---SSSCSEEEEEBSCSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc-CCCC---CCCCceEEEEECCCcchHHHHHHHHHHHhc
Confidence 34444555555544332 1211 113445788999999999999999999874
No 110
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.12 E-value=0.00014 Score=58.32 Aligned_cols=34 Identities=24% Similarity=0.454 Sum_probs=26.8
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccC
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDT 137 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~ 137 (302)
-+++|+||.||||||..+.||..+ |-..+...|.
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~----g~~~i~~g~l 35 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKY----GYTHLSAGEL 35 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH----CCEEEEHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh----CCceEcHHHH
Confidence 478999999999999999999866 4455554443
No 111
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.10 E-value=0.00012 Score=58.96 Aligned_cols=23 Identities=39% Similarity=0.602 Sum_probs=20.2
Q ss_pred EEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+.|+||+||||||+++.|+...+
T Consensus 4 Ivl~GpsG~GK~tl~~~L~~~~~ 26 (186)
T d1gkya_ 4 IVISGPSGTGKSTLLKKLFAEYP 26 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHCT
T ss_pred EEEECCCCCCHHHHHHHHHHhCC
Confidence 67999999999999999977653
No 112
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.08 E-value=0.00013 Score=58.63 Aligned_cols=25 Identities=28% Similarity=0.490 Sum_probs=21.8
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
|-.+.|+||.||||||+.+.|+-.+
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~ 27 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKY 27 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHH
Confidence 3457899999999999999998776
No 113
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=97.08 E-value=0.00026 Score=59.90 Aligned_cols=39 Identities=28% Similarity=0.497 Sum_probs=35.9
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
..|+|.|..|+||||+...||..+...+.+|.+.+.|++
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 468899999999999999999999988889999999986
No 114
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.06 E-value=0.00017 Score=57.71 Aligned_cols=24 Identities=21% Similarity=0.441 Sum_probs=20.9
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
..+.|+||+||||||+++.|....
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHC
T ss_pred CcEEEECCCCCCHHHHHHHHHHhC
Confidence 478899999999999999988643
No 115
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=97.05 E-value=9.1e-05 Score=63.94 Aligned_cols=38 Identities=21% Similarity=0.443 Sum_probs=29.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
++||.|++||||||+.+.|...+...+-++.+...|-|
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 89999999999999999999999877766666666654
No 116
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.02 E-value=0.00018 Score=56.89 Aligned_cols=23 Identities=26% Similarity=0.567 Sum_probs=20.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
.+.|+||.||||||..+.||-.+
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAY 24 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 36799999999999999999876
No 117
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.02 E-value=0.00017 Score=58.28 Aligned_cols=23 Identities=30% Similarity=0.523 Sum_probs=20.1
Q ss_pred EEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+.|+||+||||||+++.|+..++
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~~ 25 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEHS 25 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHhCC
Confidence 66999999999999999987653
No 118
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.01 E-value=0.00018 Score=56.51 Aligned_cols=23 Identities=35% Similarity=0.528 Sum_probs=20.0
Q ss_pred EEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+.|+|+.||||||+.+.||..+.
T Consensus 4 IvliG~~G~GKSTig~~La~~l~ 26 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALG 26 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 44779999999999999998773
No 119
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=97.01 E-value=0.0011 Score=57.71 Aligned_cols=27 Identities=26% Similarity=0.322 Sum_probs=23.8
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+..+++|+||+|+|||.|++.||..+.
T Consensus 51 p~~~~lf~Gp~GvGKT~lak~la~~l~ 77 (315)
T d1r6bx3 51 PVGSFLFAGPTGVGKTEVTVQLSKALG 77 (315)
T ss_dssp CSEEEEEECSTTSSHHHHHHHHHHHHT
T ss_pred CceEEEEECCCcchhHHHHHHHHhhcc
Confidence 445889999999999999999999864
No 120
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.01 E-value=0.00017 Score=56.82 Aligned_cols=23 Identities=39% Similarity=0.518 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
.+.|+|++||||||+.+.||..+
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~L 26 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARAL 26 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHh
Confidence 35689999999999999999776
No 121
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=97.00 E-value=0.00019 Score=57.09 Aligned_cols=23 Identities=26% Similarity=0.609 Sum_probs=21.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
.+.|+||.||||||..+.||..+
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKY 24 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47799999999999999999876
No 122
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.00 E-value=0.0013 Score=53.82 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=31.6
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhh------hCCCeEEEecccC
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFK------KRKKSVLLAACDT 137 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~------~~~g~V~l~~~d~ 137 (302)
+++|+++.|.||+||||||++-.++.... ..++.+.+.....
T Consensus 31 i~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~ 78 (251)
T d1szpa2 31 VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEG 78 (251)
T ss_dssp EESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSS
T ss_pred CcCCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecc
Confidence 57899999999999999999988875432 1245666665543
No 123
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=96.99 E-value=0.00017 Score=57.94 Aligned_cols=22 Identities=36% Similarity=0.514 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~ 122 (302)
.++|+|++|||||||++.|.|.
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g~ 46 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHhcCC
Confidence 4999999999999999999973
No 124
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=96.98 E-value=0.00046 Score=58.50 Aligned_cols=41 Identities=32% Similarity=0.369 Sum_probs=37.1
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
...++.+.|..|+||||+...||..+...+.+|.+.+.|++
T Consensus 19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 34788888999999999999999999988889999999976
No 125
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=96.95 E-value=0.00057 Score=56.19 Aligned_cols=96 Identities=23% Similarity=0.259 Sum_probs=56.6
Q ss_pred EEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHhCC
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKN 181 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~~~ 181 (302)
+.|.||.|+|||-|+..++..+...+..+.+.....+ ..++ .+.. .. .... .. .....+
T Consensus 39 l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~-----~~---~~~~-~~-----~~~~~~ 97 (213)
T d1l8qa2 39 IFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDF----AQAM---VEHL-----KK---GTIN-EF-----RNMYKS 97 (213)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHH----HHHH---HHHH-----HH---TCHH-HH-----HHHHHT
T ss_pred EEEECCCCCcHHHHHHHHHHHhccCccceEEechHHH----HHHH---HHHH-----Hc---cchh-hH-----HHHHhh
Confidence 6799999999999999999988766555555432211 1111 1000 00 0111 11 123457
Q ss_pred CCeEEEcCCC----CccchHHHHHHHHHHHHHhchhhccccc
Q psy2881 182 TDIVIVDTSG----RLSTQSHLMRELKKIKKVIEKKIFELPY 219 (302)
Q Consensus 182 ~~llllDEP~----d~~~~~~l~~~L~~l~~~~~~~i~~~~h 219 (302)
.++|++|+-. ....+..+...+..+... ++.+++++.
T Consensus 98 ~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~-~~~iiits~ 138 (213)
T d1l8qa2 98 VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLL-EKQIILASD 138 (213)
T ss_dssp CSEEEEECGGGGTTCHHHHHHHHHHHHHHHHT-TCEEEEEES
T ss_pred ccchhhhhhhhhcCchHHHHHHHHHHHHHhhc-cceEEEecC
Confidence 8999999875 455566677777766543 555555554
No 126
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=96.94 E-value=0.00018 Score=59.83 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=25.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
-+.|.||.|+||||+++.+|+.+... -..+.+.+..
T Consensus 37 ~~Ll~GPpG~GKTtla~~la~~~~~~--~~~~~~~~~~ 72 (239)
T d1ixsb2 37 HLLLFGPPGLGKTTLAHVIAHELGVN--LRVTSGPAIE 72 (239)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHTCC--EEEEETTTCC
T ss_pred eEEEECCCCCCHHHHHHHHHHHhCCC--eEeccCCccc
Confidence 46799999999999999999876422 2444444443
No 127
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.92 E-value=0.00067 Score=55.85 Aligned_cols=24 Identities=38% Similarity=0.433 Sum_probs=21.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
.+.|.||+|+||||+++.+|..+.
T Consensus 47 ~lll~Gp~G~GKTtla~~iak~l~ 70 (231)
T d1iqpa2 47 HLLFAGPPGVGKTTAALALARELF 70 (231)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHHH
T ss_pred eEEEECCCCCcHHHHHHHHHHHHH
Confidence 377999999999999999998764
No 128
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=96.91 E-value=0.00045 Score=59.12 Aligned_cols=40 Identities=30% Similarity=0.449 Sum_probs=35.8
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCC
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFR 139 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~ 139 (302)
.++++.|..|+||||+...||..+...+.+|.+.+.|++.
T Consensus 3 r~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ~ 42 (289)
T d2afhe1 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKA 42 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSS
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 4677899999999999999999998888899999999863
No 129
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.91 E-value=0.00025 Score=57.69 Aligned_cols=37 Identities=32% Similarity=0.400 Sum_probs=29.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAA 141 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~ 141 (302)
||+|.||.||||||..+.|+..+. =..+.+-|++|..
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~g----l~~iStGdLlR~~ 41 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQ----WHLLDSGAIYRVL 41 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHT----CEEEEHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC----CcEECHHHHHHHH
Confidence 899999999999999999998773 3456666666643
No 130
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.89 E-value=0.00085 Score=54.06 Aligned_cols=37 Identities=38% Similarity=0.529 Sum_probs=31.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDT 137 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~ 137 (302)
+|+|-|+-||||||+++.|+..+...+-+|.+...+.
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~P~ 38 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPR 38 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 5889999999999999999999887776777765443
No 131
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.87 E-value=0.00029 Score=55.92 Aligned_cols=23 Identities=35% Similarity=0.531 Sum_probs=20.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
.+.|+||.||||||..+.|+..+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~ 24 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKL 24 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37799999999999999999877
No 132
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=96.87 E-value=0.00045 Score=63.20 Aligned_cols=26 Identities=38% Similarity=0.616 Sum_probs=23.3
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+.-+.++||+|||||-+++.||+.+.
T Consensus 49 ksNILliGPTGvGKTlLAr~LAk~l~ 74 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEIARRLAKLAN 74 (443)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTT
T ss_pred cccEEEECCCCCCHHHHHHHHHHHhC
Confidence 34688999999999999999999874
No 133
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.87 E-value=0.00022 Score=56.43 Aligned_cols=21 Identities=38% Similarity=0.589 Sum_probs=19.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-|+|+|++|||||||++.|.|
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999986
No 134
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=96.86 E-value=0.00026 Score=55.63 Aligned_cols=22 Identities=41% Similarity=0.617 Sum_probs=19.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~ 122 (302)
.|+|+|+.|||||||++.|+|.
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999999874
No 135
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=96.85 E-value=0.00025 Score=56.92 Aligned_cols=27 Identities=37% Similarity=0.677 Sum_probs=24.2
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
.++-+|+|-|+-||||||+++.|+..+
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGT
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHh
Confidence 467799999999999999999998765
No 136
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.81 E-value=0.0003 Score=56.33 Aligned_cols=29 Identities=21% Similarity=0.078 Sum_probs=25.8
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+.+|+++.|.||+|+||||++..++....
T Consensus 20 i~~G~v~~i~G~~GsGKT~l~l~la~~~~ 48 (242)
T d1n0wa_ 20 IETGSITEMFGEFRTGKTQICHTLAVTCQ 48 (242)
T ss_dssp EETTSEEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CcCCEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999887654
No 137
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.81 E-value=0.00035 Score=55.34 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=20.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
.+.|+||.||||||..+.|+-.+
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~ 24 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKY 24 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 46789999999999999998765
No 138
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.81 E-value=0.00031 Score=53.77 Aligned_cols=22 Identities=32% Similarity=0.545 Sum_probs=19.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~ 122 (302)
.++|+|++|||||||++.|.+-
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3679999999999999999873
No 139
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=96.78 E-value=0.00033 Score=53.66 Aligned_cols=21 Identities=43% Similarity=0.583 Sum_probs=18.9
Q ss_pred EEEEcCCCCCHHHHHHHHHhH
Q psy2881 102 IMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~ 122 (302)
++|+|+.|||||||++.+++-
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 679999999999999998764
No 140
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.78 E-value=0.00034 Score=55.02 Aligned_cols=21 Identities=48% Similarity=0.642 Sum_probs=19.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
+|+|+|.+|||||||++.|.|
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 689999999999999999987
No 141
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=96.78 E-value=0.00033 Score=53.99 Aligned_cols=22 Identities=41% Similarity=0.625 Sum_probs=19.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~ 122 (302)
.++|+|.+|||||||++.+.+-
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4889999999999999998764
No 142
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.77 E-value=0.00038 Score=56.84 Aligned_cols=38 Identities=32% Similarity=0.348 Sum_probs=30.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAA 142 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~ 142 (302)
+++|-||.||||||..+.||..+ |=..+.+-+++|..+
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~l----g~~~istGdl~R~~a 42 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDF----GFTYLDTGAMYRAAT 42 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHH----CCEEEEHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh----CCcEECHHHHHHHHH
Confidence 57888999999999999999887 335667667776544
No 143
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.76 E-value=0.00037 Score=56.11 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=26.0
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
-.++|+||.||||||+.+.||-.+ |-+.+...|..
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~----g~~~is~gdll 41 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHF----ELKHLSSGDLL 41 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHB----CCEEEEHHHHH
T ss_pred eeEEEECCCCCCHHHHHHHHHHHH----CCeEEcHHHHH
Confidence 367799999999999999999765 34455444443
No 144
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=96.74 E-value=0.0002 Score=57.00 Aligned_cols=20 Identities=30% Similarity=0.554 Sum_probs=18.7
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
|+|+|+.+||||||++.|+|
T Consensus 4 VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 4 VGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp EEEESSTTSSHHHHHHHSEE
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 79999999999999999875
No 145
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=96.74 E-value=0.00034 Score=54.85 Aligned_cols=25 Identities=28% Similarity=0.417 Sum_probs=21.2
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
+.-.++|+|++|||||||++.+.+-
T Consensus 12 k~~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 12 KTGKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp CCEEEEEEEETTSSHHHHHHHHSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 3446889999999999999999764
No 146
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.73 E-value=0.00039 Score=56.01 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=19.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++|+|+.|||||||++.|.+
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~ 25 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTT 25 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 678999999999999999986
No 147
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=96.73 E-value=0.0004 Score=54.92 Aligned_cols=22 Identities=36% Similarity=0.551 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~ 122 (302)
+|+|+|..|||||||++.|.|.
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 7999999999999999999873
No 148
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=96.71 E-value=0.00047 Score=53.22 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=20.7
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
|=-++++|+.|||||||++.|.|.
T Consensus 1 ~~kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 1 GMKVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 345889999999999999999863
No 149
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.70 E-value=0.0023 Score=54.84 Aligned_cols=42 Identities=31% Similarity=0.398 Sum_probs=31.7
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhh---CCCeEEEecccCC
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKK---RKKSVLLAACDTF 138 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~---~~g~V~l~~~d~~ 138 (302)
+.+-++||-|+.|||||||.+.|...+.. ..-.|.+...|-+
T Consensus 25 ~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 25 KCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp CSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred CCCEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCC
Confidence 45679999999999999999988766543 2235777666654
No 150
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.70 E-value=0.00047 Score=54.70 Aligned_cols=32 Identities=31% Similarity=0.498 Sum_probs=24.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEeccc
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD 136 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d 136 (302)
.+.|+||.||||||..+.|+-.+ |-+.+...|
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~----g~~~i~~~d 35 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERF----HAAHLATGD 35 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH----CCEEEEHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh----CCceEeccc
Confidence 36688999999999999999876 445555444
No 151
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=96.68 E-value=0.0014 Score=51.11 Aligned_cols=44 Identities=18% Similarity=0.223 Sum_probs=32.9
Q ss_pred HHHHHHHHHhhccCCCcceecCCCeEEEEEcCCCCCHHHHHHHHHhHhhh
Q psy2881 76 VLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKK 125 (302)
Q Consensus 76 ~l~~~l~~~l~~~l~~i~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~ 125 (302)
.+.+.+.+.+. +...++|.+++|.|+=||||||+.+.++.-+..
T Consensus 16 ~lg~~la~~l~------~~~~~~g~ii~L~G~LGaGKTtfvr~~~~~lg~ 59 (158)
T d1htwa_ 16 RFGKKFAEILL------KLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGH 59 (158)
T ss_dssp HHHHHHHHHHH------HHCCSSCEEEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH------hccCCCCeEEEEecCCCccHHHHHHHHHhhccc
Confidence 34555555552 223468999999999999999999999987753
No 152
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=96.63 E-value=0.0055 Score=51.98 Aligned_cols=25 Identities=20% Similarity=0.418 Sum_probs=22.1
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
...+++|+|+.|+||||+++.+...
T Consensus 43 ~~~~v~I~GmgGiGKTtLA~~v~~~ 67 (277)
T d2a5yb3 43 DSFFLFLHGRAGSGKSVIASQALSK 67 (277)
T ss_dssp SSEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHh
Confidence 3579999999999999999998765
No 153
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=96.61 E-value=0.0011 Score=58.94 Aligned_cols=80 Identities=19% Similarity=0.158 Sum_probs=44.3
Q ss_pred HHHHHHHHHCCCChHHHHH-HHHHHHHHHhcCCCCCHHHHHHHHHHHHHH---HhhccCCCcceecCCCeEEEEEcCCCC
Q psy2881 35 NELESDLLKADVGFETTQF-LLNELKKIIYSKKLFNTEQVRNVLHNLLVN---LLKSLEKPLIFKKCKPFVIMIVGVNGV 110 (302)
Q Consensus 35 ~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~l~~~l~~i~l~~~~g~ii~lvGpnGs 110 (302)
.+|++.|-+.=++.+-|.+ ++..++++++-. .+...++..... .-...+++ -+.+++ .+.++||+||
T Consensus 9 ~ei~~~L~~~ViGQd~Akkava~Avrn~~rR~------~~~~~~r~~~~~~~~~~~~~~~~--~~~p~~-niLfiGPTGv 79 (364)
T d1um8a_ 9 KELKAVLDNYVIGQEQAKKVFSVAVYNHYKRL------SFKEKLKKQDNQDSNVELEHLEE--VELSKS-NILLIGPTGS 79 (364)
T ss_dssp HHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHH------HHHHHHHHHCSHHHHHHHHHHHH--TTCCCC-CEEEECCTTS
T ss_pred HHHHHHhCCeecChHHHHHHHHHHHHHHHHHH------HHHHHhhcccccccccccccccc--ccCCCc-ceeeeCCCCc
Confidence 5677788888888777654 566665554311 000111110000 00001111 122333 5779999999
Q ss_pred CHHHHHHHHHhHh
Q psy2881 111 GKTTTIGKLANYF 123 (302)
Q Consensus 111 GKTTll~~Lag~~ 123 (302)
|||-+.+.||.++
T Consensus 80 GKTElAk~LA~~~ 92 (364)
T d1um8a_ 80 GKTLMAQTLAKHL 92 (364)
T ss_dssp SHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhhc
Confidence 9999999999875
No 154
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=96.58 E-value=0.00047 Score=53.58 Aligned_cols=21 Identities=29% Similarity=0.638 Sum_probs=18.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++|+|+.|||||||++.+.+
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~ 24 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNG 24 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHcC
Confidence 478999999999999999865
No 155
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.58 E-value=0.00072 Score=55.47 Aligned_cols=29 Identities=28% Similarity=0.363 Sum_probs=26.3
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKK 125 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~ 125 (302)
.+|.+|+|-|+-||||||+++.|+-.+..
T Consensus 1 ~kGk~I~iEG~DGsGKST~~~~L~~~L~~ 29 (214)
T d1tmka_ 1 GRGKLILIEGLDRTGKTTQCNILYKKLQP 29 (214)
T ss_dssp CCCCEEEEEESTTSSHHHHHHHHHHHTTT
T ss_pred CCeEEEEEECCCCCcHHHHHHHHHHHHHh
Confidence 37999999999999999999999988764
No 156
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=96.55 E-value=0.00089 Score=50.41 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=23.2
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEe
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLA 133 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~ 133 (302)
..++..|.+|+|||||+.+-.+ +...+++|.+.
T Consensus 7 ~~~~~ll~apTGsGKT~~~~~~---~~~~~~~vli~ 39 (136)
T d1a1va1 7 SFQVAHLHAPTGSGKSTKVPAA---YAAQGYKVLVL 39 (136)
T ss_dssp SCEEEEEECCTTSCTTTHHHHH---HHTTTCCEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHH---HHHcCCcEEEE
Confidence 4467788999999999876433 23445666665
No 157
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=96.54 E-value=0.00033 Score=55.46 Aligned_cols=21 Identities=19% Similarity=0.426 Sum_probs=19.2
Q ss_pred EEEEcCCCCCHHHHHHHHHhH
Q psy2881 102 IMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~ 122 (302)
|+|+|..|||||||++.|.|.
T Consensus 4 VaivG~~nvGKSTLin~L~~~ 24 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTRA 24 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCSS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999999763
No 158
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=96.51 E-value=0.00086 Score=53.04 Aligned_cols=24 Identities=33% Similarity=0.469 Sum_probs=20.8
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
+=.++|+|..|||||||++.|.+.
T Consensus 8 ~~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 8 AIKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
Confidence 345899999999999999999863
No 159
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=96.51 E-value=0.00078 Score=53.76 Aligned_cols=23 Identities=39% Similarity=0.563 Sum_probs=19.8
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHH
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLA 120 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~La 120 (302)
.+-++||.|+.||||||.++.|.
T Consensus 2 ~p~IIgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 2 HPIIIGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHH
Confidence 35799999999999999988764
No 160
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.50 E-value=0.00067 Score=55.76 Aligned_cols=23 Identities=35% Similarity=0.491 Sum_probs=20.6
Q ss_pred EEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+.|.||+|+||||+++.++..+.
T Consensus 36 lll~Gp~G~GKTtl~~~i~~~l~ 58 (237)
T d1sxjd2 36 MLFYGPPGTGKTSTILALTKELY 58 (237)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCChHHHHHHHHHHHc
Confidence 67999999999999999998753
No 161
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.50 E-value=0.00045 Score=56.98 Aligned_cols=27 Identities=26% Similarity=0.245 Sum_probs=24.2
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
++.+|+|-|+-||||||+++.|+..+.
T Consensus 1 ~~k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 1 RIKKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp CCEEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 467999999999999999999998764
No 162
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.40 E-value=0.0017 Score=53.57 Aligned_cols=41 Identities=22% Similarity=0.182 Sum_probs=30.8
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhhh------CCCeEEEeccc
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFKK------RKKSVLLAACD 136 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~~------~~g~V~l~~~d 136 (302)
+++|+++.|.||+||||||+.-.++..... .++.+.+....
T Consensus 33 lp~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~ 79 (254)
T d1pzna2 33 IETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTE 79 (254)
T ss_dssp EESSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESS
T ss_pred ccCCEEEEEEcCCCCCHHHHHHHHHHHhhchHHhcCCCceEEEEecc
Confidence 578999999999999999999877754431 24566665544
No 163
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.37 E-value=0.0009 Score=54.05 Aligned_cols=22 Identities=27% Similarity=0.388 Sum_probs=19.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~ 122 (302)
-|+|+|+.|||||||++.+.+-
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 5889999999999999999863
No 164
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=96.33 E-value=0.0012 Score=54.78 Aligned_cols=25 Identities=20% Similarity=0.339 Sum_probs=21.7
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
+.++.|.||.|+|||||++.++...
T Consensus 29 ~~~i~i~G~~G~GKTsLl~~~~~~~ 53 (283)
T d2fnaa2 29 APITLVLGLRRTGKSSIIKIGINEL 53 (283)
T ss_dssp SSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHHC
Confidence 4688999999999999999887654
No 165
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=96.33 E-value=0.0012 Score=51.42 Aligned_cols=24 Identities=29% Similarity=0.538 Sum_probs=20.9
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHh
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag 121 (302)
+.-.++|+|..|||||||++.|.+
T Consensus 14 k~~kI~vvG~~~~GKSsLi~rl~~ 37 (177)
T d1zj6a1 14 QEHKVIIVGLDNAGKTTILYQFSM 37 (177)
T ss_dssp SCEEEEEEESTTSSHHHHHHHHHT
T ss_pred CeEEEEEECCCCCCHHHHHHHHhc
Confidence 345688999999999999999876
No 166
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=96.31 E-value=0.0042 Score=52.62 Aligned_cols=37 Identities=22% Similarity=0.191 Sum_probs=25.4
Q ss_pred cCCCeEEEEEcCCCCCHHHH-H-HHHHhHhhhCCCeEEEe
Q psy2881 96 KCKPFVIMIVGVNGVGKTTT-I-GKLANYFKKRKKSVLLA 133 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTl-l-~~Lag~~~~~~g~V~l~ 133 (302)
+.+|+.+.+.+|+|||||+. + ..+.... ..++++.+.
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~~~~-~~~~~~lvi 44 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVREAI-KRGLRTLIL 44 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHHHHH-HHTCCEEEE
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHHHHH-hcCCEEEEE
Confidence 35789999999999999973 2 3333333 345667665
No 167
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.28 E-value=0.0011 Score=54.34 Aligned_cols=24 Identities=38% Similarity=0.610 Sum_probs=20.9
Q ss_pred EEEEcCCCCCHHHHHHHHHhHhhh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYFKK 125 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~~~ 125 (302)
+.|.||+|+||||+++.++..+..
T Consensus 39 ~ll~Gp~G~GKTt~a~~la~~l~~ 62 (224)
T d1sxjb2 39 MIISGMPGIGKTTSVHCLAHELLG 62 (224)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHG
T ss_pred EEEECCCCCCchhhHHHHHHHHhc
Confidence 668999999999999999987653
No 168
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=96.28 E-value=0.0011 Score=51.56 Aligned_cols=21 Identities=33% Similarity=0.494 Sum_probs=18.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++|+|+.|||||||++.+.+
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~ 24 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIAS 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 377999999999999998865
No 169
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=96.25 E-value=0.00081 Score=56.26 Aligned_cols=24 Identities=25% Similarity=0.260 Sum_probs=20.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
++.|.||.|+||||+++.++..+.
T Consensus 48 ~l~l~GppGtGKT~l~~~l~~~l~ 71 (287)
T d1w5sa2 48 IYGSIGRVGIGKTTLAKFTVKRVS 71 (287)
T ss_dssp EEECTTCCSSSHHHHHHHHHHHHH
T ss_pred EEEeECCCCCCHHHHHHHHHHHHH
Confidence 566679999999999999998764
No 170
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.24 E-value=0.0011 Score=51.69 Aligned_cols=20 Identities=40% Similarity=0.659 Sum_probs=18.4
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|+.|||||||++.+.+
T Consensus 8 i~vvG~~~vGKTsLi~~l~~ 27 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYAD 27 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHc
Confidence 78999999999999998865
No 171
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.19 E-value=0.0012 Score=51.58 Aligned_cols=20 Identities=40% Similarity=0.770 Sum_probs=18.4
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|+.|||||||++.+.+
T Consensus 5 i~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHc
Confidence 78999999999999998875
No 172
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.14 E-value=0.0024 Score=54.24 Aligned_cols=26 Identities=35% Similarity=0.362 Sum_probs=22.5
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhh
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKK 125 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~ 125 (302)
.-+.||||.|+|||+++.-+|..+..
T Consensus 40 ~n~lLVG~~GvGKTalv~~la~ri~~ 65 (268)
T d1r6bx2 40 NNPLLVGESGVGKTAIAEGLAWRIVQ 65 (268)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred CCcEEECCCCCcHHHHHHHHHHHHHh
Confidence 35779999999999999999987653
No 173
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.13 E-value=0.0018 Score=53.24 Aligned_cols=28 Identities=18% Similarity=-0.037 Sum_probs=25.2
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
+++|.++.|.||+|+||||+...++...
T Consensus 34 ip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 34 IESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp BCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CcCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 6899999999999999999999888643
No 174
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.13 E-value=0.0014 Score=53.55 Aligned_cols=23 Identities=39% Similarity=0.515 Sum_probs=20.5
Q ss_pred EEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+.|.||.|+||||+++.++..+.
T Consensus 38 lLl~Gp~G~GKttl~~~la~~l~ 60 (227)
T d1sxjc2 38 LLFYGPPGTGKTSTIVALAREIY 60 (227)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCChhHHHHHHHHHhh
Confidence 66999999999999999998654
No 175
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.13 E-value=0.0014 Score=51.46 Aligned_cols=20 Identities=25% Similarity=0.742 Sum_probs=18.4
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|+.|||||||++.+.+
T Consensus 7 i~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998865
No 176
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=96.13 E-value=0.002 Score=57.20 Aligned_cols=34 Identities=24% Similarity=0.092 Sum_probs=28.2
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEE
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l 132 (302)
++++..++|.||.|+||||+.+.||+.+. |++.-
T Consensus 151 ~~~~~~~~~~g~~~~gk~~~~~~~~~~~~---~~~i~ 184 (362)
T d1svma_ 151 IPKKRYWLFKGPIDSGKTTLAAALLELCG---GKALN 184 (362)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHC---CEEEC
T ss_pred CCCcCeEEEECCCCCCHHHHHHHHHHHcC---CCEEE
Confidence 46677999999999999999999999874 55543
No 177
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.10 E-value=0.0012 Score=54.59 Aligned_cols=22 Identities=32% Similarity=0.493 Sum_probs=20.2
Q ss_pred EEEEcCCCCCHHHHHHHHHhHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~ 123 (302)
+.|.||+|+||||+++.++..+
T Consensus 36 lll~Gp~G~GKTt~~~~la~~l 57 (252)
T d1sxje2 36 LLLYGPNGTGKKTRCMALLESI 57 (252)
T ss_dssp EEEECSTTSSHHHHHHTHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHhh
Confidence 6799999999999999999865
No 178
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=96.07 E-value=0.00091 Score=52.40 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=20.9
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
.-.|+|+|+++||||||++.|.+.
T Consensus 16 ~~~I~lvG~~NvGKSSL~n~L~~~ 39 (188)
T d1puia_ 16 GIEVAFAGRSNAGKSSALNTLTNQ 39 (188)
T ss_dssp SEEEEEEECTTSSHHHHHTTTCCC
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 346899999999999999999764
No 179
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.05 E-value=0.0016 Score=50.44 Aligned_cols=20 Identities=30% Similarity=0.642 Sum_probs=18.1
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|+.|||||||++.+..
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998764
No 180
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.05 E-value=0.0019 Score=52.78 Aligned_cols=28 Identities=25% Similarity=0.210 Sum_probs=25.1
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
+++|+++.|.|++|+||||++-.+|.-.
T Consensus 31 l~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 31 LESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp EETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred ccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999988644
No 181
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.02 E-value=0.0017 Score=50.49 Aligned_cols=21 Identities=33% Similarity=0.591 Sum_probs=18.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++++|+.|||||||++.+.+
T Consensus 5 Ki~viG~~~vGKTsli~~l~~ 25 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 388999999999999998875
No 182
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.02 E-value=0.021 Score=48.28 Aligned_cols=43 Identities=30% Similarity=0.235 Sum_probs=32.0
Q ss_pred eecCCCeEEEEEcCCCCCHHHHHHHHHhHhhh-CCCeEEEeccc
Q psy2881 94 FKKCKPFVIMIVGVNGVGKTTTIGKLANYFKK-RKKSVLLAACD 136 (302)
Q Consensus 94 l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~-~~g~V~l~~~d 136 (302)
+.+.+|+.++|+|+.|+||||++..++.-... +.+-+.+.+..
T Consensus 63 ~pigkGQr~~If~~~g~GKt~l~~~i~~~~~~~~~~v~V~~~iG 106 (276)
T d2jdid3 63 APYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 106 (276)
T ss_dssp SCEETTCEEEEEECTTSSHHHHHHHHHHHHTTTCSSEEEEEEES
T ss_pred ccccCCCEEEeeCCCCCCHHHHHHHHHHHHHhhCCCeEEEEEec
Confidence 45779999999999999999999988876443 33444444443
No 183
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.01 E-value=0.0004 Score=53.60 Aligned_cols=21 Identities=43% Similarity=0.661 Sum_probs=19.6
Q ss_pred EEEEcCCCCCHHHHHHHHHhH
Q psy2881 102 IMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~ 122 (302)
++|+|..|||||||++.|.|.
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999874
No 184
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=96.01 E-value=0.0013 Score=51.47 Aligned_cols=22 Identities=36% Similarity=0.676 Sum_probs=19.3
Q ss_pred eEEEEEcCCCCCHHHHHHHHHh
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag 121 (302)
-.++++|+.|||||||++.+.+
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 3688999999999999998854
No 185
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.94 E-value=0.0017 Score=51.32 Aligned_cols=20 Identities=35% Similarity=0.635 Sum_probs=18.3
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++|+|+.|||||||++.+.+
T Consensus 8 i~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHhc
Confidence 78999999999999998875
No 186
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=95.94 E-value=0.0019 Score=52.28 Aligned_cols=20 Identities=30% Similarity=0.507 Sum_probs=17.7
Q ss_pred eEEEEEcCCCCCHHHHHHHH
Q psy2881 100 FVIMIVGVNGVGKTTTIGKL 119 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~L 119 (302)
-++||.|+.||||||.++.+
T Consensus 3 ~iIgITG~igSGKStv~~~l 22 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLF 22 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 47999999999999987766
No 187
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.93 E-value=0.0019 Score=50.04 Aligned_cols=20 Identities=30% Similarity=0.700 Sum_probs=18.2
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|.+|||||||++.+..
T Consensus 5 i~vvG~~~vGKTSli~~l~~ 24 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVE 24 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998865
No 188
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.93 E-value=0.002 Score=50.47 Aligned_cols=20 Identities=30% Similarity=0.622 Sum_probs=18.0
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|+.||||||+++.+.+
T Consensus 6 ivvvG~~~vGKTsli~r~~~ 25 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTD 25 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHhc
Confidence 77999999999999998764
No 189
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=95.91 E-value=0.0019 Score=51.02 Aligned_cols=21 Identities=33% Similarity=0.248 Sum_probs=19.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++|+|+..||||||++.|.+
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 489999999999999999986
No 190
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.90 E-value=0.002 Score=50.17 Aligned_cols=21 Identities=24% Similarity=0.580 Sum_probs=18.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|..|||||||++.+.+
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 378999999999999988765
No 191
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.88 E-value=0.0021 Score=50.16 Aligned_cols=21 Identities=33% Similarity=0.675 Sum_probs=18.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++|+|+.|||||||++.+..
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998875
No 192
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=95.87 E-value=0.037 Score=45.18 Aligned_cols=66 Identities=17% Similarity=0.233 Sum_probs=37.3
Q ss_pred CCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCCh-hHHHHHHHHHhhcCCCe--EEEecCCCC
Q psy2881 181 NTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQ-NTLSQIKEFSKILRITG--LIITKLDGT 257 (302)
Q Consensus 181 ~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~-~~~~~~~~f~~~~~~~~--~i~tk~d~~ 257 (302)
+..+-|+|+||-.....++ +..+ ....-..+|+++..|. ..-.+.-.....+++.. ++++|+|..
T Consensus 88 ~~~~~iiD~PGH~dfv~~~---~~g~---------~~aD~ailVvda~~G~~~Qt~e~~~~~~~~gv~~iiv~vNK~D~~ 155 (222)
T d1zunb3 88 KRKFIIADTPGHEQYTRNM---ATGA---------STCDLAIILVDARYGVQTQTRRHSYIASLLGIKHIVVAINKMDLN 155 (222)
T ss_dssp SEEEEEEECCCSGGGHHHH---HHHH---------TTCSEEEEEEETTTCSCHHHHHHHHHHHHTTCCEEEEEEECTTTT
T ss_pred ceEEEEEeccchhhhhhhh---cccc---------ccCceEEEEeccccCcccchHHHHHHHHHcCCCEEEEEEEccccc
Confidence 4578999999943332222 2211 2244556777888775 22222233344667665 467999985
Q ss_pred C
Q psy2881 258 T 258 (302)
Q Consensus 258 ~ 258 (302)
.
T Consensus 156 ~ 156 (222)
T d1zunb3 156 G 156 (222)
T ss_dssp T
T ss_pred c
Confidence 4
No 193
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.86 E-value=0.0022 Score=49.75 Aligned_cols=21 Identities=24% Similarity=0.551 Sum_probs=18.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|..|||||||++.+.+
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~ 25 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVT 25 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999998875
No 194
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.86 E-value=0.0022 Score=49.78 Aligned_cols=22 Identities=27% Similarity=0.375 Sum_probs=19.3
Q ss_pred eEEEEEcCCCCCHHHHHHHHHh
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag 121 (302)
--++|+|+.|||||||++.+.+
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 3588999999999999998864
No 195
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=95.82 E-value=0.0024 Score=51.80 Aligned_cols=21 Identities=29% Similarity=0.586 Sum_probs=18.5
Q ss_pred eEEEEEcCCCCCHHHHHHHHH
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLA 120 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~La 120 (302)
-++||+|+.||||||.++.+.
T Consensus 4 ~iIgitG~igSGKStv~~~l~ 24 (208)
T d1vhta_ 4 YIVALTGGIGSGKSTVANAFA 24 (208)
T ss_dssp EEEEEECCTTSCHHHHHHHHH
T ss_pred EEEEEECCCcCCHHHHHHHHH
Confidence 489999999999999988764
No 196
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=95.81 E-value=0.0037 Score=56.05 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=26.7
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
.-++|+|++|||||++++.+.......++.+.+.+
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD 85 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVD 85 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEe
Confidence 34889999999999999877655555566666654
No 197
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.80 E-value=0.0024 Score=49.83 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=18.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++|+|..|||||||++.+.+
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 588999999999999998765
No 198
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=95.79 E-value=0.0026 Score=54.47 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=28.6
Q ss_pred eecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhC
Q psy2881 94 FKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKR 126 (302)
Q Consensus 94 l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~ 126 (302)
+.+.+|+..+|+|+.|+||||++..|+.....+
T Consensus 38 ~PigrGQr~~I~g~~g~GKT~l~~~i~~~~~~~ 70 (289)
T d1xpua3 38 SPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYN 70 (289)
T ss_dssp SCCBTTCEEEEEECSSSSHHHHHHHHHHHHHHH
T ss_pred ccccCCCeeeEeCCCCCCHHHHHHHHHHHHhhc
Confidence 456789999999999999999999999877643
No 199
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.75 E-value=0.0026 Score=49.10 Aligned_cols=20 Identities=30% Similarity=0.532 Sum_probs=18.3
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|..|||||||++.+..
T Consensus 5 v~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998864
No 200
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.73 E-value=0.0027 Score=49.23 Aligned_cols=20 Identities=30% Similarity=0.605 Sum_probs=18.2
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++|+|..||||||+++.+.+
T Consensus 7 ivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999988865
No 201
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.70 E-value=0.0027 Score=49.42 Aligned_cols=21 Identities=24% Similarity=0.553 Sum_probs=18.8
Q ss_pred EEEEcCCCCCHHHHHHHHHhH
Q psy2881 102 IMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~ 122 (302)
++++|..|||||||++.+.+.
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 789999999999999988764
No 202
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.69 E-value=0.0033 Score=51.72 Aligned_cols=27 Identities=30% Similarity=0.397 Sum_probs=24.2
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhh
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKK 125 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~ 125 (302)
|.+++|=|+=||||||+++.|+-.+..
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~ 28 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPE 28 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTT
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhh
Confidence 579999999999999999999987653
No 203
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.68 E-value=0.01 Score=44.66 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=31.2
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
+|.+..++||=.|||||-|-..+..+...+.+|.+..
T Consensus 1 ~G~L~li~GpMfsGKTt~Li~~~~~~~~~g~~v~~ik 37 (133)
T d1xbta1 1 RGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIK 37 (133)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CcEEEEEEecccCHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 5889999999999999998888887777777777765
No 204
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.68 E-value=0.0028 Score=49.46 Aligned_cols=20 Identities=20% Similarity=0.587 Sum_probs=18.3
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|..||||||+++.+.+
T Consensus 8 I~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 88999999999999998764
No 205
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.66 E-value=0.0029 Score=48.78 Aligned_cols=21 Identities=29% Similarity=0.520 Sum_probs=18.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++++|..|||||||++.+.+
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998875
No 206
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.64 E-value=0.003 Score=48.98 Aligned_cols=21 Identities=24% Similarity=0.567 Sum_probs=18.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++|+|..|||||||++.+..
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998864
No 207
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.64 E-value=0.13 Score=40.25 Aligned_cols=33 Identities=36% Similarity=0.385 Sum_probs=22.2
Q ss_pred EEEEcCCCCCHHHHHHHHHhHh-hhCCCeEEEec
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYF-KKRKKSVLLAA 134 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~-~~~~g~V~l~~ 134 (302)
..+++|+|+|||.+...++... ...++++.+..
T Consensus 26 ~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~ 59 (200)
T d1wp9a1 26 CLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLA 59 (200)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEEC
T ss_pred eEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEc
Confidence 3477999999998666555433 34566777653
No 208
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.64 E-value=0.003 Score=49.84 Aligned_cols=20 Identities=40% Similarity=0.780 Sum_probs=18.3
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|..|||||||++.+.+
T Consensus 5 v~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998865
No 209
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.63 E-value=0.003 Score=49.49 Aligned_cols=21 Identities=29% Similarity=0.330 Sum_probs=18.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|.+|||||||+..+..
T Consensus 4 KivvvG~~~vGKTsLi~~~~~ 24 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSK 24 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999988765
No 210
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.59 E-value=0.0033 Score=48.74 Aligned_cols=21 Identities=24% Similarity=0.468 Sum_probs=18.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++|+|..|||||||++.+.+
T Consensus 5 KivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998764
No 211
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=95.59 E-value=0.0023 Score=50.43 Aligned_cols=24 Identities=42% Similarity=0.699 Sum_probs=19.9
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLA 120 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~La 120 (302)
++---++++|+.|||||||++.+.
T Consensus 15 ~k~~KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 15 NKELRILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp SSCEEEEEEEETTSSHHHHHHHTC
T ss_pred CceEEEEEECCCCCCHHHHHHHHh
Confidence 344568899999999999998874
No 212
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.58 E-value=0.0031 Score=50.30 Aligned_cols=20 Identities=25% Similarity=0.712 Sum_probs=18.4
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++|+|+.|||||||++.+.+
T Consensus 9 ivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHhh
Confidence 78999999999999998874
No 213
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.58 E-value=0.0033 Score=49.32 Aligned_cols=21 Identities=33% Similarity=0.718 Sum_probs=18.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++++|..|||||||++.+.+
T Consensus 9 Ki~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998875
No 214
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.57 E-value=0.0033 Score=48.88 Aligned_cols=20 Identities=30% Similarity=0.582 Sum_probs=18.2
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|+.|||||||++.+..
T Consensus 5 i~lvG~~~vGKTsli~r~~~ 24 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLT 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 68999999999999998875
No 215
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.56 E-value=0.0033 Score=49.07 Aligned_cols=20 Identities=25% Similarity=0.700 Sum_probs=18.2
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|+.||||||+++.+..
T Consensus 9 I~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 88999999999999988764
No 216
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.52 E-value=0.0032 Score=49.20 Aligned_cols=23 Identities=30% Similarity=0.546 Sum_probs=19.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
-++++|..|+|||||++.+.+..
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~~~ 27 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAGVH 27 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHCCC
T ss_pred EEEEECCCCcCHHHHHHHHHhCc
Confidence 47899999999999999887643
No 217
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=95.51 E-value=0.0017 Score=56.55 Aligned_cols=25 Identities=28% Similarity=0.550 Sum_probs=22.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKK 125 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~ 125 (302)
-+.|+||.|+||||+++.+++++++
T Consensus 30 ~vLl~G~pG~GKT~lar~~~~iLp~ 54 (333)
T d1g8pa_ 30 GVLVFGDRGTGKSTAVRALAALLPE 54 (333)
T ss_dssp CEEEECCGGGCTTHHHHHHHHHSCC
T ss_pred eEEEECCCCccHHHHHHHHHHhCCC
Confidence 4789999999999999999999864
No 218
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.49 E-value=0.0036 Score=48.91 Aligned_cols=21 Identities=29% Similarity=0.506 Sum_probs=18.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++|+|..|||||||++.+..
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 588999999999999988764
No 219
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=95.47 E-value=0.0022 Score=50.09 Aligned_cols=22 Identities=36% Similarity=0.587 Sum_probs=19.0
Q ss_pred eEEEEEcCCCCCHHHHHHHHHh
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag 121 (302)
--+.++|+.||||||+++.+..
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 3578999999999999998764
No 220
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.46 E-value=0.0038 Score=48.50 Aligned_cols=21 Identities=19% Similarity=0.518 Sum_probs=18.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|..|||||||+..+..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVK 28 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999998874
No 221
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=95.46 E-value=0.016 Score=51.58 Aligned_cols=24 Identities=33% Similarity=0.481 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
-..||||.|+|||+++.-||..+.
T Consensus 45 n~llvG~~GvGKtaiv~~la~~i~ 68 (387)
T d1qvra2 45 NPVLIGEPGVGKTAIVEGLAQRIV 68 (387)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCeEECCCCCCHHHHHHHHHHHHH
Confidence 357999999999999998887654
No 222
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.36 E-value=0.0043 Score=48.12 Aligned_cols=21 Identities=19% Similarity=0.512 Sum_probs=18.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|..|||||||+..+.+
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~ 25 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVS 25 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998764
No 223
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.34 E-value=0.0045 Score=48.09 Aligned_cols=20 Identities=40% Similarity=0.745 Sum_probs=18.1
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|+.||||||+++.+..
T Consensus 9 i~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 88999999999999998754
No 224
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.32 E-value=0.0045 Score=48.74 Aligned_cols=21 Identities=29% Similarity=0.371 Sum_probs=18.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++++|..|||||||++.+..
T Consensus 7 KivviG~~~vGKTsli~~~~~ 27 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTT 27 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 588999999999999988765
No 225
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=95.27 E-value=0.0068 Score=49.09 Aligned_cols=28 Identities=21% Similarity=0.411 Sum_probs=23.9
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhC
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKR 126 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~ 126 (302)
+..+.|.||.|+||||+++.+|..+-..
T Consensus 24 ~h~lLl~Gp~G~GKtt~a~~~a~~l~~~ 51 (207)
T d1a5ta2 24 HHALLIQALPGMGDDALIYALSRYLLCQ 51 (207)
T ss_dssp CSEEEEECCTTSCHHHHHHHHHHHHTCS
T ss_pred CeEEEEECCCCCcHHHHHHHHHHhcccc
Confidence 4568899999999999999999987533
No 226
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.26 E-value=0.0048 Score=47.97 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=18.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|..||||||+++.+.+
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~ 26 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQ 26 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 477999999999999998875
No 227
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.25 E-value=0.0026 Score=49.69 Aligned_cols=21 Identities=33% Similarity=0.545 Sum_probs=17.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|+.|||||||++.++.
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC-
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999987654
No 228
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=95.22 E-value=0.0066 Score=48.09 Aligned_cols=23 Identities=35% Similarity=0.484 Sum_probs=19.4
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHH
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLA 120 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~La 120 (302)
.|.-++|.|++|+||||+...+.
T Consensus 13 ~g~gvl~~G~sG~GKStlal~l~ 35 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETALELV 35 (176)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHHHHH
Confidence 47789999999999999876544
No 229
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.12 E-value=0.0057 Score=47.27 Aligned_cols=21 Identities=24% Similarity=0.550 Sum_probs=18.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|..|||||||+..+..
T Consensus 5 KivvvG~~~vGKTsli~r~~~ 25 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 378999999999999998764
No 230
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=95.11 E-value=0.007 Score=47.95 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=19.8
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHH
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLA 120 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~La 120 (302)
.|.-+.|.||+|+||||+...+.
T Consensus 14 ~g~gvli~G~sG~GKS~lal~l~ 36 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECALDLI 36 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHHHH
Confidence 57789999999999999986654
No 231
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.10 E-value=0.0069 Score=47.47 Aligned_cols=28 Identities=14% Similarity=0.336 Sum_probs=22.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKK 128 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g 128 (302)
-+.++|..||||||+++.+..-..|+.|
T Consensus 4 KivllG~~~vGKTsl~~r~~~~~~~t~~ 31 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKIIHEAGTG 31 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHSCCCS
T ss_pred EEEEECCCCCCHHHHHHHHhhCCCCCcc
Confidence 3789999999999999988765556655
No 232
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=95.08 E-value=0.0052 Score=50.20 Aligned_cols=29 Identities=14% Similarity=0.259 Sum_probs=22.0
Q ss_pred eEEEEEcCCCCCHHHHHHHHHh-HhhhCCC
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLAN-YFKKRKK 128 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag-~~~~~~g 128 (302)
.-+.++|++||||||+++.+.. ...|+-|
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~~~~pTiG 36 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRILHVVLTSG 36 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHCCCCCS
T ss_pred CEEEEECCCCCCHHHHHHHHhcCCcCCCCC
Confidence 3578999999999999998743 3346544
No 233
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.05 E-value=0.0033 Score=49.07 Aligned_cols=20 Identities=30% Similarity=0.703 Sum_probs=8.5
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|..|||||||+..+.+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999987764
No 234
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=95.02 E-value=0.0064 Score=47.20 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=18.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|..||||||+++.+..
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999998764
No 235
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.00 E-value=0.0065 Score=47.74 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=18.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++++|..|||||||+..+.+
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~ 27 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLT 27 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 578999999999999997765
No 236
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=94.99 E-value=0.0085 Score=49.40 Aligned_cols=28 Identities=29% Similarity=0.368 Sum_probs=23.3
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhC
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKR 126 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~ 126 (302)
+..+.|.||+|+||||+++.++..+-..
T Consensus 34 ~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~ 61 (239)
T d1njfa_ 34 HHAYLFSGTRGVGKTSIARLLAKGLNCE 61 (239)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHCT
T ss_pred CeeEEEECCCCCcHHHHHHHHHHHhcCc
Confidence 3467799999999999999999877543
No 237
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.97 E-value=0.0063 Score=48.01 Aligned_cols=21 Identities=38% Similarity=0.468 Sum_probs=18.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++|+|..|||||||+..+..
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~ 31 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYAN 31 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhh
Confidence 378999999999999988754
No 238
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.97 E-value=0.0059 Score=48.28 Aligned_cols=28 Identities=21% Similarity=0.361 Sum_probs=21.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHh--hhCCC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYF--KKRKK 128 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~--~~~~g 128 (302)
-+.++|..||||||++..+.-.. .|+-|
T Consensus 4 KivllG~~~vGKTsll~r~~f~~~~~pTiG 33 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQMRIIHGQDPTKG 33 (200)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHSCCCCSS
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCeee
Confidence 47799999999999999984322 25555
No 239
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.89 E-value=0.0069 Score=48.00 Aligned_cols=21 Identities=29% Similarity=0.371 Sum_probs=18.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|..|||||||+..+..
T Consensus 5 KvvllG~~~vGKTSli~r~~~ 25 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTT 25 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999987764
No 240
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.87 E-value=0.0071 Score=47.52 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=18.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++++|..||||||++..+..
T Consensus 4 KivliG~~~vGKTsli~r~~~ 24 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAK 24 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 367999999999999987754
No 241
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=94.86 E-value=0.023 Score=43.14 Aligned_cols=38 Identities=21% Similarity=0.159 Sum_probs=32.7
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
+.|.+-.++||=.|||||-|-..+..+...+.+|.+..
T Consensus 5 ~~G~l~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~ 42 (141)
T d1xx6a1 5 DHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFK 42 (141)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cceeEEEEEeccccHHHHHHHHHHHHhhhcCCcEEEEE
Confidence 46899999999999999998888888887777888765
No 242
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=94.77 E-value=0.0086 Score=49.12 Aligned_cols=22 Identities=32% Similarity=0.433 Sum_probs=19.5
Q ss_pred eEEEEEcCCCCCHHHHHHHHHh
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag 121 (302)
.++||.|+-||||||..+.|+.
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e 23 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMS 23 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 4799999999999999888854
No 243
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.68 E-value=0.031 Score=48.75 Aligned_cols=21 Identities=19% Similarity=0.262 Sum_probs=18.9
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
-++|+|.-|+|||||+..|..
T Consensus 19 NI~iiGhvd~GKTTL~d~Ll~ 39 (341)
T d1n0ua2 19 NMSVIAHVDHGKSTLTDSLVQ 39 (341)
T ss_dssp EEEEECCGGGTHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 499999999999999998853
No 244
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=94.67 E-value=0.011 Score=46.53 Aligned_cols=23 Identities=30% Similarity=0.439 Sum_probs=19.1
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHH
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLA 120 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~La 120 (302)
.|.-+.|.|++|+||||+...+.
T Consensus 14 ~g~gvli~G~sg~GKS~la~~l~ 36 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETALELI 36 (169)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHHHHH
Confidence 47789999999999999875543
No 245
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.66 E-value=0.0075 Score=51.28 Aligned_cols=23 Identities=39% Similarity=0.554 Sum_probs=21.3
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
.+|+++||.++|||||++.|.|.
T Consensus 33 ~vvsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 33 VVVAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp EEEEEEEBTTSSHHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHcCC
Confidence 58999999999999999999874
No 246
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=94.66 E-value=0.011 Score=47.60 Aligned_cols=24 Identities=33% Similarity=0.476 Sum_probs=21.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
-+.||||.|+|||+++.-||..+.
T Consensus 45 n~lLvG~pGVGKTalv~~LA~ri~ 68 (195)
T d1jbka_ 45 NPVLIGEPGVGKTAIVEGLAQRII 68 (195)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CeEEEecCCcccHHHHHHHHHHHH
Confidence 578999999999999999998775
No 247
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.45 E-value=0.0093 Score=48.97 Aligned_cols=37 Identities=16% Similarity=0.155 Sum_probs=25.9
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
.|+-+.+++|+|+|||+..-..+-.....++++.+..
T Consensus 57 ~g~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~ 93 (237)
T d1gkub1 57 RKESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIF 93 (237)
T ss_dssp TTCCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCCCEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEe
Confidence 3666779999999999876555544445566776653
No 248
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.40 E-value=0.023 Score=48.06 Aligned_cols=27 Identities=22% Similarity=0.294 Sum_probs=22.5
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
+..++ ++++|.-.|||||+++.|+|.-
T Consensus 24 ~~~P~-ivvvG~~SsGKSsliNaLlg~~ 50 (299)
T d2akab1 24 LDLPQ-IAVVGGQSAGKSSVLENFVGRD 50 (299)
T ss_dssp CCCCE-EEEEEBTTSCHHHHHHHHHTSC
T ss_pred CCCCe-EEEEcCCCCCHHHHHHHHhCCC
Confidence 34454 6699999999999999999964
No 249
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.25 E-value=0.012 Score=46.17 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=19.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~ 122 (302)
-+.++|..||||||++..+..-
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3679999999999999988654
No 250
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.97 E-value=0.1 Score=41.52 Aligned_cols=85 Identities=18% Similarity=-0.036 Sum_probs=42.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCC---eeecCCCCC------HHHHHH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVP---VISEKKITD------PAAIAF 171 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~---~~~~~~~~~------~~~~~~ 171 (302)
...+..|+|+|||-+...++..+ .+++.+.. + +....+|+..-.+..+.. .+....... .....
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~---~~~~Liv~-p--~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~i~t~~~~- 159 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINEL---STPTLIVV-P--TLALAEQWKERLGIFGEEYVGEFSGRIKELKPLTVSTYDSA- 159 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHS---CSCEEEEE-S--SHHHHHHHHHHHGGGCGGGEEEESSSCBCCCSEEEEEHHHH-
T ss_pred CcEEEeCCCCCceehHHhHHHHh---cCceeEEE-c--ccchHHHHHHHHHhhcccchhhcccccccccccccceehhh-
Confidence 34578899999997765554333 45666653 2 233444543322222211 111110000 01111
Q ss_pred HHHHHHHhCCCCeEEEcCCCC
Q psy2881 172 NAINIAQKKNTDIVIVDTSGR 192 (302)
Q Consensus 172 ~~la~al~~~~~llllDEP~d 192 (302)
......+..+.++||+||.-.
T Consensus 160 ~~~~~~~~~~~~lvIiDEaH~ 180 (206)
T d2fz4a1 160 YVNAEKLGNRFMLLIFDEVHH 180 (206)
T ss_dssp HHTHHHHTTTCSEEEEECSSC
T ss_pred hhhhHhhCCcCCEEEEECCee
Confidence 112234567899999999863
No 251
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=93.92 E-value=0.12 Score=42.47 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=25.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
-+.|.|+.|+|||++.+.|...-..........++
T Consensus 25 pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~ 59 (247)
T d1ny5a2 25 PVLITGESGVGKEVVARLIHKLSDRSKEPFVALNV 59 (247)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEET
T ss_pred CEEEECCCCcCHHHHHHHHHHhcCCcccccccchh
Confidence 47899999999999999998765554444433333
No 252
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=93.82 E-value=0.016 Score=50.43 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=29.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEeccc
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD 136 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d 136 (302)
.|.|=|+=||||||+++.|+..+...+..|.+...+
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~~g~~v~~~~EP 42 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEP 42 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTTSGGGEEEECCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhcCCceEEEeCc
Confidence 478889999999999999999887766677776543
No 253
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=93.81 E-value=0.028 Score=48.92 Aligned_cols=32 Identities=31% Similarity=0.323 Sum_probs=25.8
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEe
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLA 133 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~ 133 (302)
.|.|=|+=||||||+++.|+..+.... .+.+.
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l~~~~-~v~~~ 39 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAASGGS-PTLYF 39 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGGGCSS-CEEEE
T ss_pred EEEEECCccCCHHHHHHHHHHHhccCC-CeEEE
Confidence 567889999999999999999887655 45444
No 254
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=93.71 E-value=0.031 Score=47.23 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=30.4
Q ss_pred eecCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 94 FKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 94 l~~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
+.+.+|+.++|+|+.|+|||+++..++.....+...+.+.+.
T Consensus 62 ~pig~GQr~~Ifg~~g~GKt~l~~~~~~~~~~~~~v~V~~~i 103 (276)
T d1fx0a3 62 IPVGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAI 103 (276)
T ss_dssp SCCBTTCBCBEEESSSSSHHHHHHHHHHTCCTTTCEEEEEEE
T ss_pred ccccCCceEeeccCCCCChHHHHHHHHhhhcccCceeeeeee
Confidence 567899999999999999999987655443344444444443
No 255
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=93.70 E-value=0.027 Score=44.59 Aligned_cols=82 Identities=13% Similarity=0.140 Sum_probs=44.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEE-ecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL-AACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQK 179 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l-~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~ 179 (302)
++.++|+..||||...-.+++ ..+++.+ .+...+...-.+.+..+.++.+-.+.....+.+.... + ....
T Consensus 1 iiLVtGGarSGKS~~AE~l~~----~~~~~~YiAT~~~~D~em~~RI~~Hr~rR~~~w~tiE~~~~l~~~----l-~~~~ 71 (180)
T d1c9ka_ 1 MILVTGGARSGKSRHAEALIG----DAPQVLYIATSQILDDEMAARIQHHKDGRPAHWRTAECWRHLDTL----I-TADL 71 (180)
T ss_dssp CEEEEECTTSSHHHHHHHHHC----SCSSEEEEECCCC------CHHHHHHHTSCTTEEEECCSSCGGGT----S-CTTS
T ss_pred CEEEECCCCccHHHHHHHHHh----cCCCcEEEEccCCCCHHHHHHHHHHHhcCcCCCEEecccccHHHH----H-Hhhc
Confidence 468999999999999988763 3445554 4433333222334444444444445444333332211 1 1234
Q ss_pred CCCCeEEEcCCC
Q psy2881 180 KNTDIVIVDTSG 191 (302)
Q Consensus 180 ~~~~llllDEP~ 191 (302)
.+++.+|+|.-+
T Consensus 72 ~~~~~vLlDclt 83 (180)
T d1c9ka_ 72 APDDAILLECIT 83 (180)
T ss_dssp CTTCEEEEECHH
T ss_pred Ccccchhhhhhh
Confidence 667899998764
No 256
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=93.70 E-value=0.018 Score=48.44 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=22.7
Q ss_pred EEEEEcCCCCCHHHHHH-HHHhHhhh---CCCeEEEec
Q psy2881 101 VIMIVGVNGVGKTTTIG-KLANYFKK---RKKSVLLAA 134 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~-~Lag~~~~---~~g~V~l~~ 134 (302)
-+.|+|+.||||||++. .++.++.. ...+|.+..
T Consensus 16 ~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt 53 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVT 53 (306)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred CEEEEeeCCccHHHHHHHHHHHHHHhcCCChhHEEEEe
Confidence 36789999999998764 44444432 224687764
No 257
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.64 E-value=0.014 Score=46.67 Aligned_cols=35 Identities=11% Similarity=-0.042 Sum_probs=21.3
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEe
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLA 133 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~ 133 (302)
|.-+.+.+|+|||||+..-...-..-...+++.+.
T Consensus 40 ~~~~il~apTGsGKT~~a~l~i~~~~~~~~~vl~l 74 (202)
T d2p6ra3 40 GKNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYV 74 (202)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCCCCchhHHHHHHHHHHhhccCcceee
Confidence 44567999999999876422211112345666665
No 258
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=93.44 E-value=0.032 Score=47.36 Aligned_cols=27 Identities=26% Similarity=0.448 Sum_probs=22.5
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhh-hC
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFK-KR 126 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~-~~ 126 (302)
++ ++++|.-.|||||+++.|.|.-- |.
T Consensus 25 P~-ivVvG~~ssGKSSliNaLlG~~~lP~ 52 (306)
T d1jwyb_ 25 PQ-IVVVGSQSSGKSSVLENIVGRDFLPR 52 (306)
T ss_dssp CE-EEEEECSSSSHHHHHHHHHTSCCCCC
T ss_pred Ce-EEEEeCCCCCHHHHHHHHhCCCCCCC
Confidence 44 67999999999999999999643 44
No 259
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=93.22 E-value=0.042 Score=43.88 Aligned_cols=26 Identities=19% Similarity=0.241 Sum_probs=22.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKR 126 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~ 126 (302)
.++++|.-.+|||||+..|.+.+...
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~~~~~~ 30 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKILAEG 30 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHHHHHHc
Confidence 38999999999999999998766543
No 260
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=93.18 E-value=0.021 Score=49.02 Aligned_cols=22 Identities=32% Similarity=0.277 Sum_probs=19.3
Q ss_pred EEEEcCCCCCHHHHHHHHHhHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~ 123 (302)
+||||..-||||||++.|++.-
T Consensus 3 v~lvG~pn~GKStlfn~lt~~~ 24 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLVD 24 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC--
T ss_pred EeEECCCCCCHHHHHHHHHCCC
Confidence 7999999999999999998863
No 261
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=93.15 E-value=0.035 Score=48.72 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=24.4
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHh-Hhh---hCCCeEEEe
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLAN-YFK---KRKKSVLLA 133 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag-~~~---~~~g~V~l~ 133 (302)
+.++.|.||.|+||||++..+.. +.. ..+.+|.+.
T Consensus 163 ~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ 201 (359)
T d1w36d1 163 RRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLA 201 (359)
T ss_dssp BSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEE
T ss_pred CCeEEEEcCCCCCceehHHHHHHHHHHHHhccCCeEEEe
Confidence 46899999999999999876544 333 223456654
No 262
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=92.91 E-value=0.025 Score=48.10 Aligned_cols=23 Identities=30% Similarity=0.410 Sum_probs=20.9
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
--+||||...||||||++.|++-
T Consensus 11 ~kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 11 LKTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHS
T ss_pred cEEEEECCCCCCHHHHHHHHHCC
Confidence 35999999999999999999975
No 263
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=92.84 E-value=0.029 Score=44.44 Aligned_cols=22 Identities=36% Similarity=0.392 Sum_probs=19.7
Q ss_pred EEEEcCCCCCHHHHHHHHHhHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~ 123 (302)
++++|.-.+|||||++.|.|..
T Consensus 8 IaiiGhvd~GKSTL~~~L~g~~ 29 (195)
T d1kk1a3 8 IGMVGHVDHGKTTLTKALTGVW 29 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHTCC
T ss_pred EEEEeccCCcHHHHHHHHHhhh
Confidence 7999999999999999998743
No 264
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=92.62 E-value=0.04 Score=44.03 Aligned_cols=23 Identities=30% Similarity=0.395 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
.++++|.-.+|||||+..|.+..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~~~ 32 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITGIW 32 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHSCC
T ss_pred EEEEEEccCCcHHHHHHHHHhhh
Confidence 59999999999999999998744
No 265
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=92.19 E-value=0.046 Score=46.25 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=22.2
Q ss_pred EEEEEcCCCCCHHHHHH-HHHhHhhh---CCCeEEEec
Q psy2881 101 VIMIVGVNGVGKTTTIG-KLANYFKK---RKKSVLLAA 134 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~-~Lag~~~~---~~g~V~l~~ 134 (302)
.+.|.|+.||||||++. .++.++.. ...+|.+..
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt 63 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAIT 63 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEE
T ss_pred CEEEEecCCccHHHHHHHHHHHHHHcCCCCHHHeEeEe
Confidence 36788999999998764 44444432 124677764
No 266
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=92.12 E-value=0.039 Score=46.42 Aligned_cols=22 Identities=36% Similarity=0.442 Sum_probs=20.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~ 122 (302)
-+||||-.-|||||+++.|++-
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHCC
Confidence 5899999999999999999864
No 267
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=91.47 E-value=0.059 Score=43.01 Aligned_cols=27 Identities=19% Similarity=0.176 Sum_probs=24.0
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
.+.-+.|.||+|+||||++..++..+.
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~i~ 40 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEYVE 40 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHh
Confidence 456788999999999999999999775
No 268
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.27 E-value=0.15 Score=37.36 Aligned_cols=40 Identities=13% Similarity=0.061 Sum_probs=30.8
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhh-C-CCeEEEeccc
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKK-R-KKSVLLAACD 136 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~-~-~g~V~l~~~d 136 (302)
++|-.+.+.|-+||||+|+.+.|...+-. . +.+|.+.+.|
T Consensus 4 kqgf~i~~tg~~~~gk~~ia~al~~~l~q~~G~R~vtll~~~ 45 (122)
T d1g8fa3 4 KQGFSIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHN 45 (122)
T ss_dssp GCCEEEEECTTCCSCHHHHHHHHHHHHTTSCSCCCEEECCCT
T ss_pred ccceEEEEeCCCCCCHHHHHHHHHHHHHHhcCCcceEEecCC
Confidence 46888889999999999999888665544 4 4578876554
No 269
>d2jfga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=91.01 E-value=0.071 Score=42.07 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=26.4
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
-+|+|.|-| ||||+-.+|+.++...+-.+.+.+.
T Consensus 12 ~vI~VTGT~--GKTTt~~~l~~iL~~~g~~~~~~~~ 45 (204)
T d2jfga3 12 PIVAITGSN--GKSTVTTLVGEMAKAAGVNVGVGGN 45 (204)
T ss_dssp CEEEEECSS--SHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEECCC--CHHHHHHHHHHHHHhcCCCcccCCc
Confidence 466666665 7999999999999887766766553
No 270
>d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=90.99 E-value=0.11 Score=40.82 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=28.3
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
|+++++|.|-| ||||+..+|+.++...+-.+...+.
T Consensus 1 p~kvI~VTGTn--GKTTt~~mi~~iL~~~g~~~~~~g~ 36 (214)
T d1gg4a4 1 PARVVALTGSS--GKTSVKEMTAAILSQCGNTLYTAGN 36 (214)
T ss_dssp CCEEEEEECSS--CHHHHHHHHHHHHTTTSCEEECCTT
T ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHHhCCCCEEEeCc
Confidence 46777777777 6999999999999877666666554
No 271
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=90.91 E-value=0.083 Score=42.79 Aligned_cols=21 Identities=29% Similarity=0.561 Sum_probs=18.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHh
Q psy2881 101 VIMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag 121 (302)
.++++|.-++|||||+..|..
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~ 25 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLM 25 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHH
Confidence 389999999999999998854
No 272
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=90.83 E-value=0.053 Score=46.91 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=22.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
.|+|=|+=||||||+++.|+..+.. ..|.+..
T Consensus 6 rI~IEG~iGsGKTTl~~~La~~l~~--~~v~~~~ 37 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTTQLLVALGSR--DDIVYVP 37 (329)
T ss_dssp EEEECSCTTSSHHHHHHHHTC------CCEEEEC
T ss_pred EEEEECCcCCCHHHHHHHHHHHhCC--CCeEEec
Confidence 4778899999999999999987643 2355543
No 273
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=90.56 E-value=3.4 Score=33.10 Aligned_cols=38 Identities=21% Similarity=0.159 Sum_probs=28.5
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
+.+....|.|..|||||=..-..+...-..+++|.+.-
T Consensus 74 ~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~ 111 (233)
T d2eyqa3 74 PLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLV 111 (233)
T ss_dssp SSCCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEEC
T ss_pred cCccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEc
Confidence 34567889999999999776665555556778888764
No 274
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=90.32 E-value=0.1 Score=41.76 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=25.9
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeE
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V 130 (302)
++-..+.|.||.++|||+++..|+.++ +|.|
T Consensus 51 PKkn~i~~~GP~~TGKS~f~~sl~~~l---~G~v 81 (205)
T d1tuea_ 51 PKKNCLVFCGPANTGKSYFGMSFIHFI---QGAV 81 (205)
T ss_dssp TTCSEEEEESCGGGCHHHHHHHHHHHH---TCEE
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHh---CCEE
Confidence 455689999999999999999999887 3554
No 275
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=90.22 E-value=0.062 Score=45.51 Aligned_cols=29 Identities=17% Similarity=0.051 Sum_probs=24.9
Q ss_pred eecCCCeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 94 FKKCKPFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 94 l~~~~g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
+.+.+|+.++|+|+.|+||||++..++.-
T Consensus 63 ~pig~GQr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 63 VPIGRGQRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp SCCBTTCBCEEEESTTSSHHHHHHHHHHH
T ss_pred cCccCCCEEEeecCCCCChHHHHHHHHHh
Confidence 46789999999999999999998766654
No 276
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=90.16 E-value=0.07 Score=45.78 Aligned_cols=20 Identities=35% Similarity=0.421 Sum_probs=17.4
Q ss_pred CCCeEEEEEcCCCCCHHHHH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll 116 (302)
..|++..+.|.+|+|||||-
T Consensus 12 ~~~~valffGLSGTGKTTLs 31 (318)
T d1j3ba1 12 KEGDVAVFFGLSGTGKTTLS 31 (318)
T ss_dssp TTCCEEEEEECTTSCHHHHT
T ss_pred CCCCEEEEEccCCCCccccc
Confidence 35889999999999999973
No 277
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=90.00 E-value=0.073 Score=45.51 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=24.5
Q ss_pred HHhhhHhCCceEEEecCCC-C-CcCccCChHHHHHHhcc
Q psy2881 264 AAIAKKYSIPLYFIGIGEK-I-EDLQIFNAVDFVNALLN 300 (302)
Q Consensus 264 ~~~~~~~~~pv~~~~~gq~-v-~dl~~~~~~~~~~~l~~ 300 (302)
.....+++..+.-+-+|.. + ..+..-..+.+++.++.
T Consensus 199 ~~ki~~~~~~v~LvNTGw~G~G~Ri~l~~TR~ii~ai~~ 237 (313)
T d2olra1 199 VKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILN 237 (313)
T ss_dssp HHHHHHHTCEEEEEECSBCTTSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEeccccCCCCcCCHHHHHHHHHHHHh
Confidence 3445567888888888864 3 55666666777776663
No 278
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=89.98 E-value=0.11 Score=43.50 Aligned_cols=27 Identities=26% Similarity=0.265 Sum_probs=23.8
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
++-..+.|.||.++||||++..|+.++
T Consensus 102 ~k~n~~~l~G~~~tGKS~f~~~i~~~l 128 (267)
T d1u0ja_ 102 GKRNTIWLFGPATTGKTNIAEAIAHTV 128 (267)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CccEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 345688999999999999999999987
No 279
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=89.62 E-value=0.84 Score=34.64 Aligned_cols=36 Identities=31% Similarity=0.313 Sum_probs=28.4
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
+|-+....| ||=||||-.--+|-...-.+.+|.+..
T Consensus 2 kG~i~vytG-~GKGKTTAAlG~alRA~G~G~rV~ivQ 37 (157)
T d1g5ta_ 2 RGIIIVFTG-NGKGKTTAAFGTAARAVGHGKNVGVVQ 37 (157)
T ss_dssp CCCEEEEES-SSSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEEEeC-CCCCcHHHHHHHHHHHhcCCCEEEEEE
Confidence 577777888 899999998777766556788898864
No 280
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=89.31 E-value=0.28 Score=36.63 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=28.9
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
|.+..++||=.|||||-|-..+..+...+.+|.+...
T Consensus 2 G~L~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp 38 (139)
T d2b8ta1 2 GWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKP 38 (139)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cEEEEEEccccCHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 6788899999999999666666666766777877643
No 281
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=88.96 E-value=0.098 Score=44.88 Aligned_cols=20 Identities=35% Similarity=0.429 Sum_probs=17.9
Q ss_pred CCCeEEEEEcCCCCCHHHHH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll 116 (302)
+.|++..+.|.+|+|||||-
T Consensus 12 ~~gd~alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 12 KQGDVTVFFGLSGTGKTTLS 31 (323)
T ss_dssp TTCCEEEEECCTTSSHHHHH
T ss_pred CCCCEEEEEccCCCCcccce
Confidence 46889999999999999995
No 282
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=87.85 E-value=0.18 Score=47.75 Aligned_cols=28 Identities=25% Similarity=0.469 Sum_probs=25.0
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
.+.+.|.+-|.+|||||+..+.|..++.
T Consensus 84 ~~~QsIiisGeSGsGKTe~~k~il~yL~ 111 (684)
T d1lkxa_ 84 QENQCVIISGESGAGKTEASKKIMQFLT 111 (684)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 4568999999999999999999988875
No 283
>d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=87.83 E-value=0.14 Score=40.68 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=22.9
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEE
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l 132 (302)
.+|+|.|-| ||||+-.+|+.++...+-++..
T Consensus 13 ~~I~ITGTn--GKTTt~~~l~~iL~~~~~~~~~ 43 (215)
T d1p3da3 13 HGIAVAGTH--GKTTTTAMISMIYTQAKLDPTF 43 (215)
T ss_dssp EEEEEESSS--CHHHHHHHHHHHHHHTTCCCEE
T ss_pred CEEEEECCC--CHHHHHHHHHHHHHhCCCCceE
Confidence 467777665 7999999999999866544443
No 284
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=87.82 E-value=0.19 Score=41.84 Aligned_cols=25 Identities=36% Similarity=0.646 Sum_probs=21.8
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
.+-.++++|-.-|||||+++.|.+.
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CceEEEEEecCccchhhhhhhhhcc
Confidence 4556999999999999999999873
No 285
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=87.53 E-value=0.2 Score=47.75 Aligned_cols=28 Identities=29% Similarity=0.453 Sum_probs=25.1
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
+..+.+.+-|.+|||||+..+.|..++.
T Consensus 89 ~~~Q~IiisGeSGaGKTe~~k~il~yL~ 116 (710)
T d1br2a2 89 REDQSILCTGESGAGKTENTKKVIQYLA 116 (710)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4568999999999999999999998875
No 286
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=87.51 E-value=0.2 Score=47.73 Aligned_cols=28 Identities=29% Similarity=0.501 Sum_probs=25.3
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
.+.+.+.+-|.+|||||+..+.+..++.
T Consensus 123 ~~nQsIiisGeSGaGKTe~~k~il~yL~ 150 (712)
T d1d0xa2 123 RQNQSLLITGESGAGKTENTKKVIQYLA 150 (712)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999998876
No 287
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]}
Probab=87.49 E-value=0.32 Score=38.65 Aligned_cols=33 Identities=27% Similarity=0.290 Sum_probs=26.7
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEec
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAA 134 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~ 134 (302)
.+|+|.|-| ||||+-.+|+.++...+-++.+.|
T Consensus 6 ~vI~ITGT~--GKTTt~~~l~~iL~~~g~~~~~~g 38 (234)
T d1e8ca3 6 RLVGVTGTN--GKTTTTQLLAQWSQLLGEISAVMG 38 (234)
T ss_dssp EEEEEESSS--CHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEECCC--cHHHHHHHHHHHHHHCCCCeEEEC
Confidence 477777777 899999999999998776776654
No 288
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.39 E-value=0.097 Score=45.63 Aligned_cols=45 Identities=2% Similarity=0.173 Sum_probs=33.0
Q ss_pred HhCCCCeEEEcCCC---CccchHHHHHHHHHHHHHhchhhccccceeeh
Q psy2881 178 QKKNTDIVIVDTSG---RLSTQSHLMRELKKIKKVIEKKIFELPYEIFL 223 (302)
Q Consensus 178 l~~~~~llllDEP~---d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~l 223 (302)
...+++++++|||. |+.+...+.+.|.++.. .+.-++++||+..+
T Consensus 351 ~~~~~pililDE~d~~Ld~~~~~~~~~~l~~~~~-~~~Q~I~iTH~~~~ 398 (427)
T d1w1wa_ 351 SYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRN-PDLQFIVISLKNTM 398 (427)
T ss_dssp TSSCCSEEEESSTTTTCCHHHHHHHHHHHHHHCB-TTBEEEEECSCHHH
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeCCHHH
Confidence 34677899999996 88888888888877642 23347789997654
No 289
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.74 E-value=4.9 Score=30.96 Aligned_cols=18 Identities=33% Similarity=0.372 Sum_probs=14.0
Q ss_pred CeEEEEEcCCCCCHHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll 116 (302)
|+=+.+.+|+|+|||...
T Consensus 38 g~dvi~~a~tGsGKTlay 55 (206)
T d1s2ma1 38 GRDILARAKNGTGKTAAF 55 (206)
T ss_dssp TCCEEEECCTTSCHHHHH
T ss_pred CCCEEEecCCcchhhhhh
Confidence 444789999999999543
No 290
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=86.63 E-value=1.7 Score=35.80 Aligned_cols=68 Identities=16% Similarity=0.023 Sum_probs=40.7
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCCh-hHHHHHHHhcccCCCCeeecCCCCCH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRA-AAYEQLLILGKYNDVPVISEKKITDP 166 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~-~~~~ql~~~~~~~~~~~~~~~~~~~~ 166 (302)
..|.+.= =.+|=|||.+....+.+....+..|.+.....+-. ...+.+..+.+.+|+.+-......++
T Consensus 93 ~~G~iae--m~TGEGKTL~a~l~a~l~al~g~~vhvvTvNdyLA~RDae~m~~iy~~lGlsvg~~~~~~~~ 161 (273)
T d1tf5a3 93 HDGNIAE--MKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLNSMSK 161 (273)
T ss_dssp HTTSEEE--CCTTSCHHHHHHHHHHHHHTTSSCEEEEESSHHHHHHHHHHHHHHHHHTTCCEEECCTTSCH
T ss_pred Hhhhhee--ecCCCcchhHHHHHHHHHHhcCCCceEEecCccccchhhhHHhHHHHHcCCCccccccccCH
Confidence 4564322 26899999777777766667787899887654411 11234555566677766443333333
No 291
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=86.59 E-value=0.23 Score=47.82 Aligned_cols=28 Identities=32% Similarity=0.566 Sum_probs=25.1
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
...+.+.+-|.+|||||+..+.|..++.
T Consensus 121 ~~~QsIiisGeSGaGKTe~~K~il~yL~ 148 (794)
T d2mysa2 121 RENQSILITGESGAGKTVNTKRVIQYFA 148 (794)
T ss_dssp TCCEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 4568899999999999999999998885
No 292
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.83 E-value=0.24 Score=40.49 Aligned_cols=22 Identities=32% Similarity=0.498 Sum_probs=19.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHhH
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~ 122 (302)
-++++|.-++|||||+..|+..
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~~ 29 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYK 29 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHH
Confidence 5889999999999999988654
No 293
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=84.98 E-value=0.31 Score=46.50 Aligned_cols=29 Identities=28% Similarity=0.447 Sum_probs=25.4
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKK 125 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~ 125 (302)
..++.+.|-|.+|||||+..+.+..++..
T Consensus 92 ~~~Q~IiisGeSGsGKTe~~k~il~~l~~ 120 (730)
T d1w7ja2 92 ERNQSIIVSGESGAGKTVSAKYAMRYFAT 120 (730)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 45788999999999999999999988764
No 294
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=84.07 E-value=0.35 Score=40.59 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=27.8
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
.+|+|.|-| ||||+...|..++...+-+|.+.+.
T Consensus 40 kvI~VTGTN--GKtST~~~i~~IL~~~G~kvG~~tS 73 (296)
T d2gc6a2 40 RYIHVTGTN--GKGSAANAIAHVLEASGLTVGLYTA 73 (296)
T ss_dssp CEEEEECSS--SHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEEeccC--cHHHHHHHHHHHHHhcCCceeeeec
Confidence 478888877 6999999999999988877776543
No 295
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=83.64 E-value=0.33 Score=46.72 Aligned_cols=28 Identities=29% Similarity=0.417 Sum_probs=24.8
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
...+.+.|-|.+|||||...+.|..++.
T Consensus 119 ~~nQ~IiisGESGaGKTe~~K~il~yL~ 146 (789)
T d1kk8a2 119 RENQSCLITGESGAGKTENTKKVIMYLA 146 (789)
T ss_dssp TSEEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4568899999999999999999988876
No 296
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=82.76 E-value=0.27 Score=40.25 Aligned_cols=20 Identities=30% Similarity=0.438 Sum_probs=18.2
Q ss_pred EEEEcCCCCCHHHHHHHHHh
Q psy2881 102 IMIVGVNGVGKTTTIGKLAN 121 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag 121 (302)
++++|.-++|||||+..|..
T Consensus 27 i~iiGHVD~GKSTL~~~Ll~ 46 (245)
T d1r5ba3 27 IVFIGHVDAGKSTLGGNILF 46 (245)
T ss_dssp EEEEECGGGTHHHHHHHHHH
T ss_pred EEEEeeCCCCHHHHHHHHHH
Confidence 89999999999999998854
No 297
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=82.29 E-value=7.7 Score=29.85 Aligned_cols=19 Identities=26% Similarity=0.303 Sum_probs=14.3
Q ss_pred EEEEEcCCCCCHHHHHHHH
Q psy2881 101 VIMIVGVNGVGKTTTIGKL 119 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~L 119 (302)
-+.+..|+|+|||...-..
T Consensus 44 d~iv~a~TGsGKT~~~~l~ 62 (208)
T d1hv8a1 44 NIVAQARTGSGKTASFAIP 62 (208)
T ss_dssp EEEEECCSSSSHHHHHHHH
T ss_pred Ceeeechhcccccceeecc
Confidence 4567899999999865433
No 298
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=81.13 E-value=0.74 Score=35.92 Aligned_cols=31 Identities=35% Similarity=0.420 Sum_probs=25.7
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeE
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V 130 (302)
++++++|.|-| ||||+..+|+.++...+.++
T Consensus 13 ~~~~iAITGTn--GKTTt~~~l~~iL~~~g~~~ 43 (207)
T d1j6ua3 13 KKEEFAVTGTD--GKTTTTAMVAHVLKHLRKSP 43 (207)
T ss_dssp CCCEEEEECSS--SHHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCC--CHHHHHHHHHHHHHhCCCCC
Confidence 46789999887 69999999999998766553
No 299
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=80.97 E-value=0.51 Score=43.06 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=22.6
Q ss_pred EEEEcCCCCCHHHHHH-HHHhHhhhC---CCeEEEec
Q psy2881 102 IMIVGVNGVGKTTTIG-KLANYFKKR---KKSVLLAA 134 (302)
Q Consensus 102 i~lvGpnGsGKTTll~-~Lag~~~~~---~g~V~l~~ 134 (302)
+.|+|.-||||||++- .++.++... ..+|.+..
T Consensus 27 ~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~lt 63 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAIT 63 (623)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEE
T ss_pred EEEEEeCchHHHHHHHHHHHHHHHcCCCCcccEEEEe
Confidence 6677999999998884 466554321 24687764
No 300
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=80.77 E-value=2.6 Score=34.61 Aligned_cols=37 Identities=19% Similarity=0.073 Sum_probs=26.5
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEe
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLA 133 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~ 133 (302)
..+....|.|..|||||=..-..+...-..+.++.+.
T Consensus 102 ~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m 138 (264)
T d1gm5a3 102 EKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFM 138 (264)
T ss_dssp SSCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEE
T ss_pred cCcceeeeeccccccccHHHHHHHHHHHhcccceeEE
Confidence 3445678999999999976655554444667777776
No 301
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=80.40 E-value=0.62 Score=38.90 Aligned_cols=34 Identities=24% Similarity=0.159 Sum_probs=27.1
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
.++++.|-| ||||+...|..++...+-++.+.+.
T Consensus 44 kvI~VTGTN--GKTSt~~~i~~IL~~~g~~~g~~~s 77 (296)
T d1o5za2 44 KTIHIGGTN--GKGSVANMVSNILVSQGYRVGSYYS 77 (296)
T ss_dssp EEEEEECSS--SHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred CEEEEEecC--cHHHHHHHHHHHHHHcCCCcceecc
Confidence 577777777 6999999999999877777766544
No 302
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=79.63 E-value=0.72 Score=36.06 Aligned_cols=17 Identities=24% Similarity=0.202 Sum_probs=14.2
Q ss_pred CeEEEEEcCCCCCHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTT 115 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTl 115 (302)
|+-+.+..|+|||||..
T Consensus 38 G~dvii~a~TGSGKTla 54 (209)
T d1q0ua_ 38 GESMVGQSQTGTGKTHA 54 (209)
T ss_dssp TCCEEEECCSSHHHHHH
T ss_pred CCCeEeeccccccccee
Confidence 55588999999999974
No 303
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.97 E-value=1.3 Score=37.96 Aligned_cols=39 Identities=13% Similarity=-0.011 Sum_probs=29.0
Q ss_pred eecCCCeEEEEEc--CCCCCHHHHHHHHHhHhhhC--CCeEEEecccC
Q psy2881 94 FKKCKPFVIMIVG--VNGVGKTTTIGKLANYFKKR--KKSVLLAACDT 137 (302)
Q Consensus 94 l~~~~g~ii~lvG--pnGsGKTTll~~Lag~~~~~--~g~V~l~~~d~ 137 (302)
++-++|+.+.+.| |++||||+|.- +.|. +-+|...|.|+
T Consensus 11 vt~P~g~~~yvaaAFPSaCGKTnlAM-----l~p~~pGwkv~~vGDDi 53 (363)
T d1khba1 11 ITNPEGEKKYLAAAFPSACGKTNLAM-----MNPSLPGWKVECVGDDI 53 (363)
T ss_dssp EECTTSCEEEEEEECCTTSCHHHHHT-----CCCCSTTCEEEEEESSC
T ss_pred ecCCCCCEEEEEEecCccccchhHHH-----hCCCCCCcEEEEecCce
Confidence 4556799999998 99999999843 2332 56787777776
No 304
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=73.60 E-value=0.66 Score=38.34 Aligned_cols=28 Identities=32% Similarity=0.362 Sum_probs=22.6
Q ss_pred eecCCCeEEEEEcCCCCCHHHHHHHHHhH
Q psy2881 94 FKKCKPFVIMIVGVNGVGKTTTIGKLANY 122 (302)
Q Consensus 94 l~~~~g~ii~lvGpnGsGKTTll~~Lag~ 122 (302)
+.+.+ .+.+|+|||||||||++.+|+-.
T Consensus 20 i~f~~-~lnvlvG~NgsGKS~iL~Ai~~~ 47 (308)
T d1e69a_ 20 IGFSD-RVTAIVGPNGSGKSNIIDAIKWV 47 (308)
T ss_dssp EECCS-SEEEEECCTTTCSTHHHHHHHHT
T ss_pred EeCCC-CeEEEECCCCCcHHHHHHHHHHH
Confidence 44444 38999999999999999988654
No 305
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.93 E-value=2.4 Score=33.07 Aligned_cols=17 Identities=24% Similarity=0.417 Sum_probs=13.9
Q ss_pred CeEEEEEcCCCCCHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTT 115 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTl 115 (302)
|+=+.+..|+|||||..
T Consensus 38 g~dvl~~A~TGsGKTla 54 (207)
T d1t6na_ 38 GMDVLCQAKSGMGKTAV 54 (207)
T ss_dssp TCCEEEECCTTSCHHHH
T ss_pred CCCeEEEeccccccccc
Confidence 55588999999999754
No 306
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=70.42 E-value=2.6 Score=33.05 Aligned_cols=19 Identities=26% Similarity=0.377 Sum_probs=15.5
Q ss_pred CCeEEEEEcCCCCCHHHHH
Q psy2881 98 KPFVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll 116 (302)
.|+-+.+..|+|||||...
T Consensus 46 ~g~dvl~~a~TGsGKT~a~ 64 (212)
T d1qdea_ 46 EGHDVLAQAQSGTGKTGTF 64 (212)
T ss_dssp TTCCEEEECCTTSSHHHHH
T ss_pred cCCCEEeecccccchhhhh
Confidence 3566889999999999754
No 307
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=68.64 E-value=3.1 Score=35.22 Aligned_cols=38 Identities=26% Similarity=0.274 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHHHhhccCCCcceecCCCeEEEEEcCCCCCHHHHH
Q psy2881 69 NTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 69 ~~~~~~~~l~~~l~~~l~~~l~~i~l~~~~g~ii~lvGpnGsGKTTll 116 (302)
+.+++.+.+ ...+..++++. ...+.-.|++|||||-++
T Consensus 63 ~q~~vy~~v----~~~v~~~l~G~------n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 63 TNVDVFKEV----GQLVQSSLDGY------NVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp CHHHHHHHH----HHHHGGGGGTC------CEEEEEECCTTSSHHHHH
T ss_pred CHHHHHHHh----hhhhcchhccc------ccceeeeeccCCcccccc
Confidence 455555443 33444444332 245667899999999886
No 308
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=65.76 E-value=1.1 Score=33.68 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=22.9
Q ss_pred CeEEEEEcCCCC-CHHHHHHHHHhHhhhCCCeEEEecc
Q psy2881 99 PFVIMIVGVNGV-GKTTTIGKLANYFKKRKKSVLLAAC 135 (302)
Q Consensus 99 g~ii~lvGpnGs-GKTTll~~Lag~~~~~~g~V~l~~~ 135 (302)
+..++|+|.+|| |++|| ..+.. .|+.-+|....+
T Consensus 2 pK~I~IlGsTGSIG~~tL-~Vi~~--~~d~f~v~~lsa 36 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTL-DLIER--NLDRYQVIALTA 36 (150)
T ss_dssp CEEEEEETTTSHHHHHHH-HHHHH--TGGGEEEEEEEE
T ss_pred CcEEEEECCCcHHHHHHH-HHHHc--CCCCcEEEEEEe
Confidence 578999999999 98877 54443 244455554443
No 309
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=64.41 E-value=2.7 Score=35.99 Aligned_cols=16 Identities=50% Similarity=0.657 Sum_probs=13.5
Q ss_pred EEEEEcCCCCCHHHHH
Q psy2881 101 VIMIVGVNGVGKTTTI 116 (302)
Q Consensus 101 ii~lvGpnGsGKTTll 116 (302)
.+.-.|++|||||-|+
T Consensus 77 ~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 77 CIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred eeeccccCCCCccccc
Confidence 4556799999999985
No 310
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=64.17 E-value=2.3 Score=34.04 Aligned_cols=26 Identities=27% Similarity=0.287 Sum_probs=19.4
Q ss_pred CCeEEEEEcCCCCCHHH--HHHHHHhHh
Q psy2881 98 KPFVIMIVGVNGVGKTT--TIGKLANYF 123 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTT--ll~~Lag~~ 123 (302)
.|+-+.+..|+|+|||. ++-.|..+.
T Consensus 57 ~g~dvvi~a~TGsGKTlayllp~l~~l~ 84 (238)
T d1wrba1 57 EHRDIMACAQTGSGKTAAFLIPIINHLV 84 (238)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCcceeeHHHHHHHHH
Confidence 35668899999999998 555555554
No 311
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=64.00 E-value=3 Score=34.27 Aligned_cols=42 Identities=17% Similarity=0.225 Sum_probs=27.3
Q ss_pred EEEEcCCCCCHHHHHHHHHhHhh-hCCCeEEEecccCCChhHHHHH
Q psy2881 102 IMIVGVNGVGKTTTIGKLANYFK-KRKKSVLLAACDTFRAAAYEQL 146 (302)
Q Consensus 102 i~lvGpnGsGKTTll~~Lag~~~-~~~g~V~l~~~d~~~~~~~~ql 146 (302)
-.++-|+|+|||-++..++..+. ...+++.+.- .+...++|+
T Consensus 131 ~il~~pTGsGKT~i~~~i~~~~~~~~~~k~Liiv---p~~~Lv~Q~ 173 (282)
T d1rifa_ 131 RILNLPTSAGRSLIQALLARYYLENYEGKILIIV---PTTALTTQM 173 (282)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEEC---SSHHHHHHH
T ss_pred ceeEEEcccCccHHHHHHHHHhhhcccceEEEEE---cCchhHHHH
Confidence 45667999999988877776654 3345777753 233444554
No 312
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.88 E-value=4.4 Score=33.84 Aligned_cols=17 Identities=35% Similarity=0.403 Sum_probs=14.5
Q ss_pred eEEEEEcCCCCCHHHHH
Q psy2881 100 FVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll 116 (302)
..+.-.|++|||||-|+
T Consensus 77 ~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 77 GTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred cceeeecccCCCCceec
Confidence 46677899999999986
No 313
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=61.73 E-value=6 Score=32.61 Aligned_cols=69 Identities=17% Similarity=0.045 Sum_probs=41.9
Q ss_pred cCCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChh-HHHHHHHhcccCCCCeeecCCCCCH
Q psy2881 96 KCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAA-AYEQLLILGKYNDVPVISEKKITDP 166 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~-~~~ql~~~~~~~~~~~~~~~~~~~~ 166 (302)
++.|.+.=. .+|=|||-+..+.+.+....+..|.+....-+-.. ..+.+..+.+.+|+.+-......++
T Consensus 109 l~~g~iaem--~TGEGKTL~a~l~a~l~al~g~~vhvvTvNdyLA~RDa~~m~~~y~~lGlsvg~~~~~~~~ 178 (288)
T d1nkta3 109 LHLGNVAEM--KTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSEWMGRVHRFLGLQVGVILATMTP 178 (288)
T ss_dssp HHTTEEEEC--CTTSCHHHHTHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHTTCCEEECCTTCCH
T ss_pred Hhhhhhhcc--cCCCchhHHHHHHHHHHHhcCCCeEEEecCchhhhhhHHHHHHHHHHhCCCcCcccccCCh
Confidence 346654322 68999997777667666778888998876544111 1234555566677766544444444
No 314
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=61.22 E-value=3.3 Score=35.43 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHHHhhccCCCcceecCCCeEEEEEcCCCCCHHHHH
Q psy2881 69 NTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 69 ~~~~~~~~l~~~l~~~l~~~l~~i~l~~~~g~ii~lvGpnGsGKTTll 116 (302)
+.+.+++.+.. .+..++++.| ..+.-.|++|||||-|+
T Consensus 105 ~Q~~Vy~~v~p----lv~~vl~G~n------~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 105 SQSDIFEMVSP----LIQSALDGYN------ICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp CHHHHHTTTHH----HHHHHHTTCE------EEEEEECSTTSSHHHHH
T ss_pred CccchHHHHHH----HHHHHhcccc------eeEEeeccCCCccceEe
Confidence 45666554443 3333344332 34566899999999775
No 315
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=60.79 E-value=1.2 Score=34.60 Aligned_cols=18 Identities=22% Similarity=0.146 Sum_probs=14.0
Q ss_pred CeEEEEEcCCCCCHHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll 116 (302)
|+-+.++-|+|+|||...
T Consensus 40 g~~vlv~apTGsGKT~~~ 57 (206)
T d1oywa2 40 GRDCLVVMPTGGGKSLCY 57 (206)
T ss_dssp TCCEEEECSCHHHHHHHH
T ss_pred CCCEEEEcCCCCCCcchh
Confidence 445678899999998654
No 316
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=59.58 E-value=3.8 Score=34.75 Aligned_cols=17 Identities=29% Similarity=0.477 Sum_probs=13.6
Q ss_pred eEEEEEcCCCCCHHHHH
Q psy2881 100 FVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll 116 (302)
..+.-.|++|||||-|+
T Consensus 81 ~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 81 GTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeEEecccCCCCcceee
Confidence 35667899999999664
No 317
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=58.18 E-value=7.1 Score=33.95 Aligned_cols=35 Identities=29% Similarity=0.406 Sum_probs=25.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
...|.|.+|||||-+++.+.. ..+..+.+...+..
T Consensus 33 ~q~l~GltGS~ka~~iA~l~~---~~~rp~LVVt~n~~ 67 (413)
T d1t5la1 33 HQTLLGATGTGKTFTISNVIA---QVNKPTLVIAHNKT 67 (413)
T ss_dssp EEEEEECTTSCHHHHHHHHHH---HHTCCEEEECSSHH
T ss_pred cEEEeCCCCcHHHHHHHHHHH---HhCCCEEEEeCCHH
Confidence 456889999999988766554 44566888766543
No 318
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.10 E-value=23 Score=27.44 Aligned_cols=131 Identities=8% Similarity=0.067 Sum_probs=59.5
Q ss_pred CeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChh-HHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAA-AYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIA 177 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~-~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~a 177 (302)
++.+.=+| +|.|-||+.-..+ + +.+|+|.-...+..... +.+.+...+....+.+.. .+......+.++.-
T Consensus 60 ~k~vLEiG-t~~GyStl~~a~a--l-~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~----Gda~e~l~~~~~~~ 131 (219)
T d2avda1 60 AKKALDLG-TFTGYSALALALA--L-PADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL----KPALETLDELLAAG 131 (219)
T ss_dssp CCEEEEEC-CTTSHHHHHHHTT--S-CTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE----SCHHHHHHHHHHTT
T ss_pred CCeEEEEe-chhhHHHHHHHHh--C-CCCceEEEEeechhHHHHHHHHHHhcCccceEEEEE----eehhhcchhhhhhc
Confidence 45666788 8999998743332 2 55788877665543222 122222222111122222 23333332222222
Q ss_pred HhCCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeeh---hhcCCCChhHHHHHHHHHh
Q psy2881 178 QKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFL---IIDGNTGQNTLSQIKEFSK 242 (302)
Q Consensus 178 l~~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~l---vl~~~~g~~~~~~~~~f~~ 242 (302)
.....|++++|-.- ..-....+.+.++ ..+.-+++-+|+.. |.+...........+.|++
T Consensus 132 ~~~~fD~ifiD~dk--~~y~~~~~~~~~l---L~~GGvii~Dn~l~~G~v~~~~~~d~~~~~ir~~~~ 194 (219)
T d2avda1 132 EAGTFDVAVVDADK--ENCSAYYERCLQL---LRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNE 194 (219)
T ss_dssp CTTCEEEEEECSCS--TTHHHHHHHHHHH---EEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHH
T ss_pred ccCCccEEEEeCCH--HHHHHHHHHHHHH---hcCCcEEEEeCCcccCcccCcccCCHHHHHHHHHHH
Confidence 23468899999432 2222333343333 22222344555554 4444333333333445544
No 319
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.51 E-value=1.9 Score=34.23 Aligned_cols=17 Identities=29% Similarity=0.343 Sum_probs=13.7
Q ss_pred CeEEEEEcCCCCCHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTT 115 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTl 115 (302)
|+-+.+..|+|||||-.
T Consensus 54 g~dvi~~a~TGSGKTla 70 (222)
T d2j0sa1 54 GRDVIAQSQSGTGKTAT 70 (222)
T ss_dssp TCCEEEECCTTSSHHHH
T ss_pred CCCeEEEcCcchhhhhh
Confidence 45577899999999953
No 320
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=56.28 E-value=4.3 Score=34.34 Aligned_cols=17 Identities=35% Similarity=0.599 Sum_probs=14.1
Q ss_pred eEEEEEcCCCCCHHHHH
Q psy2881 100 FVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll 116 (302)
..+.-.|++|||||-|+
T Consensus 88 ~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 88 VCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred ceeeeeccCCCCCceee
Confidence 45666799999999886
No 321
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.20 E-value=2 Score=33.96 Aligned_cols=18 Identities=28% Similarity=0.497 Sum_probs=14.3
Q ss_pred CeEEEEEcCCCCCHHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTll 116 (302)
|.-+.+..|+|||||...
T Consensus 49 g~dvl~~a~TGsGKTlay 66 (218)
T d2g9na1 49 GYDVIAQAQSGTGKTATF 66 (218)
T ss_dssp TCCEEEECCTTSSHHHHH
T ss_pred CCCEEEEcccchhhhhhh
Confidence 455778999999999654
No 322
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=54.27 E-value=5.6 Score=33.47 Aligned_cols=16 Identities=44% Similarity=0.646 Sum_probs=13.3
Q ss_pred EEEEEcCCCCCHHHHH
Q psy2881 101 VIMIVGVNGVGKTTTI 116 (302)
Q Consensus 101 ii~lvGpnGsGKTTll 116 (302)
.+.-.|++|||||=|+
T Consensus 83 ~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 83 TIFAYGQTGTGKTFTM 98 (345)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred eEEeeeeccccceEEe
Confidence 4666799999999775
No 323
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=52.22 E-value=3.5 Score=34.65 Aligned_cols=17 Identities=35% Similarity=0.460 Sum_probs=13.9
Q ss_pred eEEEEEcCCCCCHHHHH
Q psy2881 100 FVIMIVGVNGVGKTTTI 116 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll 116 (302)
..+.-.|++|||||-|+
T Consensus 86 ~~i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 86 CSCFAYGQTGSGKTYTM 102 (330)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred eEEEeeeccccccceee
Confidence 34566799999999886
No 324
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.46 E-value=3.4 Score=32.12 Aligned_cols=17 Identities=29% Similarity=0.321 Sum_probs=13.7
Q ss_pred CeEEEEEcCCCCCHHHH
Q psy2881 99 PFVIMIVGVNGVGKTTT 115 (302)
Q Consensus 99 g~ii~lvGpnGsGKTTl 115 (302)
|+=+.+..|+|+|||..
T Consensus 40 g~dvl~~a~TGsGKTla 56 (206)
T d1veca_ 40 GRDILARAKNGTGKSGA 56 (206)
T ss_dssp TCCEEEECCSSSTTHHH
T ss_pred CCCEEeeccCccccccc
Confidence 45577899999999954
No 325
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=46.07 E-value=3.3 Score=30.91 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=22.0
Q ss_pred EEEEEcCCCC-CHHHHHHHHHhHhhhCCCeEEEeccc
Q psy2881 101 VIMIVGVNGV-GKTTTIGKLANYFKKRKKSVLLAACD 136 (302)
Q Consensus 101 ii~lvGpnGs-GKTTll~~Lag~~~~~~g~V~l~~~d 136 (302)
.++|+|.+|| |++|| ..+.. .|+.-+|......
T Consensus 3 ~I~IlGsTGSIG~~tL-~Vi~~--~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 3 QLTILGSTGSIGCSTL-DVVRH--NPEHFRVVALVAG 36 (151)
T ss_dssp EEEEETTTSHHHHHHH-HHHHH--CTTTEEEEEEEES
T ss_pred eEEEEcCCcHHHHHHH-HHHHh--CCCCcEEEEEEec
Confidence 4789999999 98877 44432 2555566655443
No 326
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=44.28 E-value=6.8 Score=33.60 Aligned_cols=34 Identities=26% Similarity=0.217 Sum_probs=22.0
Q ss_pred cCCCcceecCCCeEEEEEcCCCCCHHHHHH-HHHhHh
Q psy2881 88 LEKPLIFKKCKPFVIMIVGVNGVGKTTTIG-KLANYF 123 (302)
Q Consensus 88 ~l~~i~l~~~~g~ii~lvGpnGsGKTTll~-~Lag~~ 123 (302)
.++.+...+ ...+.|.+.-|||||+++- .++.++
T Consensus 7 ~~~~~~~p~--~g~~lv~A~AGsGKT~~l~~r~~~ll 41 (485)
T d1w36b1 7 TLDPLRLPL--QGERLIEASAGTGKTFTIAALYLRLL 41 (485)
T ss_dssp ECCGGGCCC--SSCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ccCcccCCC--CCCeEEEEcCchHHHHHHHHHHHHHH
Confidence 445555433 2357788999999998874 444554
No 327
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=43.99 E-value=22 Score=25.17 Aligned_cols=69 Identities=16% Similarity=0.064 Sum_probs=37.2
Q ss_pred CCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCccchHHHHHHHHH
Q psy2881 127 KKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKK 205 (302)
Q Consensus 127 ~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~~~~~llllDEP~d~~~~~~l~~~L~~ 205 (302)
+.+|.+.+-+.. ..+.++.+-+..|..+....++ . +++..+....||++++|--.-..+...+...++.
T Consensus 1 SarILiVDD~~~---~~~~l~~~L~~~g~~v~~a~~~---~----eal~~~~~~~~dlil~D~~~p~~~G~~~~~~ir~ 69 (139)
T d1w25a1 1 SARILVVDDIEA---NVRLLEAKLTAEYYEVSTAMDG---P----TALAMAARDLPDIILLDVMMPGMDGFTVCRKLKD 69 (139)
T ss_dssp CCEEEEECSSTT---HHHHHHHHHHHTTCEEEEESSH---H----HHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred CCEEEEEECCHH---HHHHHHHHHHHCCCEEEEEccc---h----hhhhhhhcccceeeeeeccccCCCchHHHHHhhh
Confidence 357888766543 2334445545556655554332 1 3344445578999999965422233334444443
No 328
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=43.55 E-value=12 Score=25.09 Aligned_cols=71 Identities=13% Similarity=0.201 Sum_probs=41.9
Q ss_pred CCCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHH
Q psy2881 97 CKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINI 176 (302)
Q Consensus 97 ~~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 176 (302)
...+-+-|+|-.|+|-|.|+ .++...+.+|. |.|.......+++. ..++.++......
T Consensus 6 ~~~~~ihfiGigG~GMs~LA----~~L~~~G~~Vs--GSD~~~~~~~~~L~----~~Gi~v~~g~~~~------------ 63 (96)
T d1p3da1 6 RRVQQIHFIGIGGAGMSGIA----EILLNEGYQIS--GSDIADGVVTQRLA----QAGAKIYIGHAEE------------ 63 (96)
T ss_dssp TTCCEEEEETTTSTTHHHHH----HHHHHHTCEEE--EEESCCSHHHHHHH----HTTCEEEESCCGG------------
T ss_pred hhCCEEEEEEECHHHHHHHH----HHHHhCCCEEE--EEeCCCChhhhHHH----HCCCeEEECCccc------------
Confidence 34567889999999999874 44455566666 44544333333333 2466655543321
Q ss_pred HHhCCCCeEEEcCCC
Q psy2881 177 AQKKNTDIVIVDTSG 191 (302)
Q Consensus 177 al~~~~~llllDEP~ 191 (302)
...++|+++. .|.
T Consensus 64 -~i~~~d~vV~-S~A 76 (96)
T d1p3da1 64 -HIEGASVVVV-SSA 76 (96)
T ss_dssp -GGTTCSEEEE-CTT
T ss_pred -cCCCCCEEEE-CCC
Confidence 1356788777 454
No 329
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=41.85 E-value=6.2 Score=33.54 Aligned_cols=16 Identities=38% Similarity=0.559 Sum_probs=13.0
Q ss_pred EEEEEcCCCCCHHHHH
Q psy2881 101 VIMIVGVNGVGKTTTI 116 (302)
Q Consensus 101 ii~lvGpnGsGKTTll 116 (302)
.+.-.|.+|||||-|+
T Consensus 116 tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 116 TCFAYGQTGSGKTHTM 131 (362)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred eEEeeccCCCCCceee
Confidence 4556799999999885
No 330
>d1q1va_ a.159.4.1 (A:) DEK C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.34 E-value=13 Score=23.57 Aligned_cols=54 Identities=13% Similarity=0.174 Sum_probs=38.8
Q ss_pred CChHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q psy2881 29 IDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLL 85 (302)
Q Consensus 29 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l 85 (302)
-+++....|++.|..+|+..-+.+.+.+.|...+.+-++.+. +..+.+.+...+
T Consensus 13 td~ei~~~i~~IL~~aDL~tvT~K~IR~~LE~~~~g~dL~~r---K~~I~~~I~~~L 66 (70)
T d1q1va_ 13 TDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTER---KDFIKTTVKELI 66 (70)
T ss_dssp CHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHCSSSCCSHH---HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHhhHHHHHHHHHHHcCCCCcHHH---HHHHHHHHHHHH
Confidence 345677899999999999999999999999888754444433 334555554444
No 331
>d2o3fa1 a.4.1.20 (A:1-83) Putative transcriptional regulator YbbH {Bacillus subtilis [TaxId: 1423]}
Probab=36.14 E-value=22 Score=23.13 Aligned_cols=74 Identities=14% Similarity=0.059 Sum_probs=46.5
Q ss_pred CcchHHHHHHHHHHHHH---HHHHHhhhcCcCChHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q psy2881 1 MKINWITRLKESLSKTA---CNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVL 77 (302)
Q Consensus 1 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 77 (302)
|..+++..++....++. .++.+.+... .++-....+.+.-...+|++.++-++++.+- .....+++..+
T Consensus 1 M~~~~l~~i~~~~~~Ls~~e~~ia~yil~~-~~~~~~~si~~lA~~~~vS~sTi~Rf~kklG-------~~gf~e~k~~l 72 (83)
T d2o3fa1 1 MATGGLAIIQSMKHKLPPSERKLADYILAH-PHKAIESTVNEISALANSSDAAVIRLCKSLG-------LKGFQDLKMRV 72 (83)
T ss_dssp CCCCHHHHHHHHGGGSCHHHHHHHHHHHHC-HHHHHTCCHHHHHHHTTCCHHHHHHHHHHTT-------CSSHHHHHHHH
T ss_pred CCccHHHHHHHHHhhCCHHHHHHHHHHHcC-HHHHHHccHHHHHHHHCCCHHHHHHHHHHhC-------CCCHHHHHHHH
Confidence 67778887777665553 4444444321 1111223466666789999999999998663 34667777767
Q ss_pred HHHHH
Q psy2881 78 HNLLV 82 (302)
Q Consensus 78 ~~~l~ 82 (302)
+..+.
T Consensus 73 ~~el~ 77 (83)
T d2o3fa1 73 AGDLA 77 (83)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 66654
No 332
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=35.79 E-value=19 Score=24.65 Aligned_cols=70 Identities=19% Similarity=0.121 Sum_probs=35.5
Q ss_pred CCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCccchHHHHHHHHH
Q psy2881 127 KKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKK 205 (302)
Q Consensus 127 ~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~~~~~llllDEP~d~~~~~~l~~~L~~ 205 (302)
+.+|.+.+-+. ...+.+..+-+..|..+..... +.. +++....-.+|+++|+|----..+-.++++.+++
T Consensus 1 GkrILivDD~~---~~~~~l~~~L~~~g~~v~~~a~--~~~----~al~~~~~~~~dliilD~~mp~~~G~e~~~~ir~ 70 (118)
T d1u0sy_ 1 GKRVLIVDDAA---FMRMMLKDIITKAGYEVAGEAT--NGR----EAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMK 70 (118)
T ss_dssp CCEEEEECSCH---HHHHHHHHHHHHTTCEEEEEES--SHH----HHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHH
T ss_pred CCEEEEEeCCH---HHHHHHHHHHHHcCCceEEEEC--CHH----HHHHHHHhccCCEEEEecCCCCCCHHHHHHHHHH
Confidence 34677776443 2334455554555655432211 221 2344444568999999965311234445555543
No 333
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=32.94 E-value=34 Score=23.34 Aligned_cols=68 Identities=16% Similarity=0.212 Sum_probs=36.1
Q ss_pred CeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCccchHHHHHHHHH
Q psy2881 128 KSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKK 205 (302)
Q Consensus 128 g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~~~~~llllDEP~d~~~~~~l~~~L~~ 205 (302)
.+|.+.+-+.. ..+.+..+-+..|..+.....+ . +++..+....|+++|+|----..+-.++.+.|++
T Consensus 2 krILiVDD~~~---~~~~l~~~L~~~g~~v~~a~~~---~----~al~~~~~~~~dlil~D~~mp~~dG~el~~~ir~ 69 (123)
T d1mb3a_ 2 KKVLIVEDNEL---NMKLFHDLLEAQGYETLQTREG---L----SALSIARENKPDLILMDIQLPEISGLEVTKWLKE 69 (123)
T ss_dssp CEEEEECSCHH---HHHHHHHHHHHTTCEEEEESCH---H----HHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHH
T ss_pred ceEEEEECCHH---HHHHHHHHHHHCCCEEEEECCH---H----HHHHHHHhCCCCEEEEEeccCCCcHHHHHHHHHh
Confidence 46777765532 2334444445556655554332 1 2344444568999999975312234445555543
No 334
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=31.57 E-value=23 Score=28.52 Aligned_cols=11 Identities=27% Similarity=0.588 Sum_probs=9.7
Q ss_pred CCCeEEEcCCC
Q psy2881 181 NTDIVIVDTSG 191 (302)
Q Consensus 181 ~~~llllDEP~ 191 (302)
-+.+.|+|+||
T Consensus 130 ~~~l~iiDtPG 140 (306)
T d1jwyb_ 130 VVNLTLVDLPG 140 (306)
T ss_dssp SCSEEEEECCC
T ss_pred CCCceEecCCC
Confidence 37899999998
No 335
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=31.24 E-value=40 Score=26.68 Aligned_cols=11 Identities=27% Similarity=0.549 Sum_probs=9.6
Q ss_pred CCCeEEEcCCC
Q psy2881 181 NTDIVIVDTSG 191 (302)
Q Consensus 181 ~~~llllDEP~ 191 (302)
-+.+.|+|+||
T Consensus 124 ~~~l~liD~PG 134 (299)
T d2akab1 124 VLNLTLVDLPG 134 (299)
T ss_dssp CCSEEEEECCC
T ss_pred CCCeeEEccCC
Confidence 36899999998
No 336
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}
Probab=29.58 E-value=1e+02 Score=23.77 Aligned_cols=87 Identities=17% Similarity=0.140 Sum_probs=49.4
Q ss_pred CCeEEEEEcCC-CCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHH--HHHHHHH
Q psy2881 98 KPFVIMIVGVN-GVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPA--AIAFNAI 174 (302)
Q Consensus 98 ~g~ii~lvGpn-GsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~--~~~~~~l 174 (302)
+|+++.|.|-+ |-|+. +|..+...+.+|.+.+.+..+..+..++.......++.++......+.. ....+.+
T Consensus 4 ~gK~vlITGgs~GIG~~-----~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLD-----TSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp TTCEEEEETTTSHHHHH-----HHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHH-----HHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHH
Confidence 48899999855 67766 4455556777888887666555555555554444444444443322322 1222223
Q ss_pred HHHHhCCCCeEEEcCCC
Q psy2881 175 NIAQKKNTDIVIVDTSG 191 (302)
Q Consensus 175 a~al~~~~~llllDEP~ 191 (302)
.. ...++|+|+- -+|
T Consensus 79 ~~-~~g~iDilvn-nAG 93 (254)
T d1sbya1 79 FD-QLKTVDILIN-GAG 93 (254)
T ss_dssp HH-HHSCCCEEEE-CCC
T ss_pred HH-HcCCCCEEEe-CCC
Confidence 22 2367888776 555
No 337
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}
Probab=28.09 E-value=83 Score=22.65 Aligned_cols=16 Identities=19% Similarity=0.316 Sum_probs=11.8
Q ss_pred cCCCeEEEEEcCCCCC
Q psy2881 96 KCKPFVIMIVGVNGVG 111 (302)
Q Consensus 96 ~~~g~ii~lvGpnGsG 111 (302)
+.+|+.+.++|..|.|
T Consensus 26 ~~~G~~VlV~GaG~iG 41 (182)
T d1vj0a2 26 SFAGKTVVIQGAGPLG 41 (182)
T ss_dssp CCBTCEEEEECCSHHH
T ss_pred CCCCCEEEEECCCccc
Confidence 4689999999754444
No 338
>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}
Probab=27.58 E-value=36 Score=28.93 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=55.1
Q ss_pred CCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHhCCCCeEEEc
Q psy2881 109 GVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVD 188 (302)
Q Consensus 109 GsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~~~~~llllD 188 (302)
.||=.-....+..++++ |.-.+...+.|.. ....+..+..+.|+.+..... .+.. .++.++-.+.++|++-
T Consensus 81 ~SGmaAi~~~l~~l~~~--Gd~vl~~~~~Yg~-t~~l~~~~~~~~Gi~~~~~d~-~d~~-----~~~~ai~~~t~lv~~E 151 (392)
T d1gc0a_ 81 ASGMGAITSTLWTLLRP--GDEVLLGNTLYGC-TFAFLHHGIGEFGVKLRHVDM-ADLQ-----ALEAAMTPATRVIYFE 151 (392)
T ss_dssp SSHHHHHHHHHHHHCCT--TCEEEEESSCCSH-HHHHHHHTGGGGTCEEEEECT-TCHH-----HHHHHCCTTEEEEEEE
T ss_pred hhHHHHHHHHHHhhccC--CCeeecccccchh-hhhhhhhhhccCCcccccCCc-cCHH-----HHHHhCCCCCeEEEec
Confidence 45545554555555543 5455555666643 344566777777876654432 2432 3555666778999999
Q ss_pred CCCCccchHHHHHHHHHHHHHh
Q psy2881 189 TSGRLSTQSHLMRELKKIKKVI 210 (302)
Q Consensus 189 EP~d~~~~~~l~~~L~~l~~~~ 210 (302)
+|+.+..+-.=++.+.++++..
T Consensus 152 sp~NP~l~v~Di~~i~~ia~~~ 173 (392)
T d1gc0a_ 152 SPANPNMHMADIAGVAKIARKH 173 (392)
T ss_dssp SSCTTTCCCCCHHHHHHHHGGG
T ss_pred ccccceeeecchHHHHHHHHhc
Confidence 9985544444455666666543
No 339
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=27.55 E-value=35 Score=22.31 Aligned_cols=67 Identities=19% Similarity=0.229 Sum_probs=40.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHhC
Q psy2881 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKK 180 (302)
Q Consensus 101 ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~~ 180 (302)
.+-|+|-.|+|-|-| |.++...+-.|. |.|.......++|. ..|++++...... ...
T Consensus 3 ~ihfiGIgG~GMs~L----A~~L~~~G~~Vs--GSD~~~~~~t~~L~----~~Gi~i~~gh~~~-------------~i~ 59 (89)
T d1j6ua1 3 KIHFVGIGGIGMSAV----ALHEFSNGNDVY--GSNIEETERTAYLR----KLGIPIFVPHSAD-------------NWY 59 (89)
T ss_dssp EEEEETTTSHHHHHH----HHHHHHTTCEEE--EECSSCCHHHHHHH----HTTCCEESSCCTT-------------SCC
T ss_pred EEEEEeECHHHHHHH----HHHHHhCCCeEE--EEeCCCChhHHHHH----HCCCeEEeeeccc-------------ccC
Confidence 367999999999886 455555665555 55655434444443 4566665443321 136
Q ss_pred CCCeEEEcCCC
Q psy2881 181 NTDIVIVDTSG 191 (302)
Q Consensus 181 ~~~llllDEP~ 191 (302)
++|+++. .|.
T Consensus 60 ~~d~vV~-SsA 69 (89)
T d1j6ua1 60 DPDLVIK-TPA 69 (89)
T ss_dssp CCSEEEE-CTT
T ss_pred CCCEEEE-ecC
Confidence 7888877 444
No 340
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=26.85 E-value=20 Score=27.17 Aligned_cols=22 Identities=27% Similarity=0.301 Sum_probs=17.4
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhh
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFK 124 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~ 124 (302)
.-+.|+|| ||+|+.+.|...++
T Consensus 10 Rpivi~Gp---~K~ti~~~L~~~~p 31 (199)
T d1kjwa2 10 RPIIILGP---TKDRANDDLLSEFP 31 (199)
T ss_dssp CCEEEEST---THHHHHHHHHHHCT
T ss_pred CCEEEECc---CHHHHHHHHHHhCc
Confidence 45778888 59999999987654
No 341
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=25.54 E-value=37 Score=20.71 Aligned_cols=27 Identities=11% Similarity=0.076 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHCCCChHHHHHHHHHH
Q psy2881 32 NLYNELESDLLKADVGFETTQFLLNEL 58 (302)
Q Consensus 32 ~~~~~l~~~L~~~~~~~~~~~~~~~~~ 58 (302)
..++.|+..+.++|+.|..++++++.+
T Consensus 7 ~l~~~I~~~~~~~g~~PP~vrdl~~~l 33 (64)
T d1lvaa3 7 KLLKDLEDKYRVSRWQPPSFKEVAGSF 33 (64)
T ss_dssp HHHHHHHHHHHHHTTSCCBHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCcHHHHHHHh
Confidence 456788888888888888888888765
No 342
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=25.39 E-value=39 Score=22.97 Aligned_cols=66 Identities=14% Similarity=0.208 Sum_probs=34.7
Q ss_pred eEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCC-CccchHHHHHHHHH
Q psy2881 129 SVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSG-RLSTQSHLMRELKK 205 (302)
Q Consensus 129 ~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~~~~~llllDEP~-d~~~~~~l~~~L~~ 205 (302)
+|.+.+-|. ...+.+..+-+..|..+.....+ . +++.......|+++|+|--- +. +...+.+.+++
T Consensus 2 kILiVDD~~---~~~~~l~~~L~~~g~~v~~a~~~---~----~al~~l~~~~~dlil~D~~mp~~-~G~~l~~~lr~ 68 (121)
T d1zesa1 2 RILVVEDEA---PIREMVCFVLEQNGFQPVEAEDY---D----SAVNQLNEPWPDLILLDWMLPGG-SGIQFIKHLKR 68 (121)
T ss_dssp EEEEECSCH---HHHHHHHHHHHHTTCEEEEECSH---H----HHHHHSSSSCCSEEEECSSCTTS-CHHHHHHHHHH
T ss_pred EEEEEeCCH---HHHHHHHHHHHHCCCEEEEECCh---H----HHHHHHHccCCCEEEeecCCCCC-CHHHHHHHHHh
Confidence 566765442 23344444445556655544322 1 33444445789999999653 22 23445455443
No 343
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=25.16 E-value=25 Score=28.20 Aligned_cols=44 Identities=9% Similarity=0.089 Sum_probs=29.4
Q ss_pred HhCCCCeEEEcCCC---CccchHHHHHHHHHHHHHhchhhccccceeeh
Q psy2881 178 QKKNTDIVIVDTSG---RLSTQSHLMRELKKIKKVIEKKIFELPYEIFL 223 (302)
Q Consensus 178 l~~~~~llllDEP~---d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~l 223 (302)
....+.++++|||- ++.....+.+.+.++.+. .-++++||...+
T Consensus 243 ~~~~~~~~~ide~e~~L~~~~~~~l~~~l~~~~~~--~Q~iitTh~~~~ 289 (329)
T g1xew.1 243 KFKPAPFYLFDEIDAHLDDANVKRVADLIKESSKE--SQFIVITLRDVM 289 (329)
T ss_dssp HHSCCSEEEEESTTTTSCHHHHHHHHHHHHHHTTT--SEEEEECCCHHH
T ss_pred hhcccchhhhhhHHhhcCHHHHHHHHHHHHHhccC--CeEEEEeCCHHH
Confidence 34789999999996 666666677777666543 224567776443
No 344
>d1g3ma_ c.37.1.5 (A:) Estrogen sulfotransferase (STE, sult1e1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.05 E-value=31 Score=27.65 Aligned_cols=29 Identities=17% Similarity=0.205 Sum_probs=21.7
Q ss_pred ceecCCCeEEEEEcCCCCCHHHHHHHHHhHh
Q psy2881 93 IFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123 (302)
Q Consensus 93 ~l~~~~g~ii~lvGpnGsGKTTll~~Lag~~ 123 (302)
+|...++. |.|+|..-|| ||+++.|...+
T Consensus 30 ~f~~rp~D-IfIvs~PKSG-TTWl~~iL~~l 58 (290)
T d1g3ma_ 30 AFQARPDD-LVIATYPKSG-TTWVSEIVYMI 58 (290)
T ss_dssp TCCCCTTC-EEEEESTTSS-HHHHHHHHHHH
T ss_pred cCCCCCCC-EEEECCCCcH-HHHHHHHHHHH
Confidence 45656666 4699999999 88888776554
No 345
>d1cuka1 a.5.1.1 (A:156-203) DNA helicase RuvA subunit, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.89 E-value=59 Score=18.65 Aligned_cols=27 Identities=7% Similarity=0.092 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHCCCChHHHHHHHHHH
Q psy2881 32 NLYNELESDLLKADVGFETTQFLLNEL 58 (302)
Q Consensus 32 ~~~~~l~~~L~~~~~~~~~~~~~~~~~ 58 (302)
+..++...+|+..|+.+.-+.+.++.+
T Consensus 3 ~~~~eAi~AL~~LGY~~~ea~~av~~i 29 (48)
T d1cuka1 3 DAEQEAVARLVALGYKPQEASRMVSKI 29 (48)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHS
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 456778889999999999998888766
No 346
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=24.79 E-value=95 Score=20.84 Aligned_cols=54 Identities=11% Similarity=0.014 Sum_probs=31.2
Q ss_pred CCeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCC
Q psy2881 127 KKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTS 190 (302)
Q Consensus 127 ~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~~~~~llllDEP 190 (302)
.|+|.+.+-|.. ..+.++.+-+..|..+.....+. +++.......|+++|+|--
T Consensus 3 k~~ILIVDDd~~---~~~~l~~~L~~~g~~v~~a~~~~-------~a~~~l~~~~~dlii~D~~ 56 (123)
T d1krwa_ 3 RGIVWVVDDDSS---IRWVLERALAGAGLTCTTFENGN-------EVLAALASKTPDVLLSDIR 56 (123)
T ss_dssp CCEEEEESSSHH---HHHHHHHHHHHTTCEEEEESSSH-------HHHHHHTTCCCSEEEECCS
T ss_pred CCEEEEEECCHH---HHHHHHHHHHHCCCEEEEeCCHH-------HHHHHHHhCCCCEEEehhh
Confidence 578888876542 23334444445565555544432 2244444578999999953
No 347
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=24.74 E-value=57 Score=26.15 Aligned_cols=39 Identities=23% Similarity=0.364 Sum_probs=33.3
Q ss_pred eEEEEEc--CCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 100 FVIMIVG--VNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 100 ~ii~lvG--pnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
+.+.+.| .+|-||=.+.+.|+.+++..+-+|...-.|+|
T Consensus 3 kyifvtGGV~S~lGKGi~~asig~ll~~~g~~v~~~K~DpY 43 (272)
T d1vcoa2 3 KYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPY 43 (272)
T ss_dssp EEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECS
T ss_pred eEEEEeCCcccccccHHHHHHHHHHHHhCCCceeEEeeccc
Confidence 4667777 78999999999999999998889988777764
No 348
>d2vo1a1 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.47 E-value=50 Score=26.52 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=33.1
Q ss_pred EEEEEc--CCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 101 VIMIVG--VNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 101 ii~lvG--pnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
.+.+.| .+|-||=.+.+.|+.+++..+-+|...-.|+|
T Consensus 3 yifVtGGV~S~lGKGi~~aSig~ll~~~g~~V~~~K~DPY 42 (273)
T d2vo1a1 3 YILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 42 (273)
T ss_dssp EEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred EEEEeCCcccccchHHHHHHHHHHHHhCCceeEEEecccc
Confidence 566777 78999999999999999999999998877765
No 349
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=22.77 E-value=1.2e+02 Score=21.32 Aligned_cols=84 Identities=14% Similarity=0.077 Sum_probs=39.1
Q ss_pred CCCCeEEEcCCCCccchHHHHHHHHHHHHHhchhhccccceeehhhcCCCChhHHH-H-HHHHHhhc-C-CCeEEEecCC
Q psy2881 180 KNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLS-Q-IKEFSKIL-R-ITGLIITKLD 255 (302)
Q Consensus 180 ~~~~llllDEP~d~~~~~~l~~~L~~l~~~~~~~i~~~~hd~~lvl~~~~g~~~~~-~-~~~f~~~~-~-~~~~i~tk~d 255 (302)
.+.++.++|+||-.......-+.+.+.... .+-..+-+.+|+++..+..... . .+.+.... . +--+++||.|
T Consensus 51 ~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~----~~~~ad~il~v~D~~~~~~~~~~~i~~~l~~~~~~~piilv~NK~D 126 (178)
T d1wf3a1 51 GRRQIVFVDTPGLHKPMDALGEFMDQEVYE----ALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLD 126 (178)
T ss_dssp TTEEEEEEECCCCCCCCSHHHHHHHHHHHH----HTSSCSEEEEEEETTSCCCHHHHHHHHHHGGGTTTSCEEEEEECGG
T ss_pred eeeeeeecccccccccccccchhccccccc----ccccccceeeeechhhhhcccccchhhheeccccchhhhhhhcccc
Confidence 456789999999222111111222221111 0112344567777776542211 1 22332221 1 1256789999
Q ss_pred CCCchhHHHHhh
Q psy2881 256 GTTKGGILAAIA 267 (302)
Q Consensus 256 ~~~~~g~~~~~~ 267 (302)
.........+..
T Consensus 127 l~~~~~~~~~~~ 138 (178)
T d1wf3a1 127 AAKYPEEAMKAY 138 (178)
T ss_dssp GCSSHHHHHHHH
T ss_pred cccCHHHHHHHH
Confidence 755544444433
No 350
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.39 E-value=62 Score=25.82 Aligned_cols=118 Identities=14% Similarity=0.198 Sum_probs=71.6
Q ss_pred eEEEEEc--CCCCCHHHHHHHHHhHhhhCCCeEEEecccCCC---hh---H---------------HHHHHHhcccCCCC
Q psy2881 100 FVIMIVG--VNGVGKTTTIGKLANYFKKRKKSVLLAACDTFR---AA---A---------------YEQLLILGKYNDVP 156 (302)
Q Consensus 100 ~ii~lvG--pnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~---~~---~---------------~~ql~~~~~~~~~~ 156 (302)
+.+.+.| .+|-||=.+.+.|+.+++..+-+|...-.|+|- ++ . --.+..|.+..++.
T Consensus 4 kyifvtGGV~S~lGKGi~~aSig~llk~~g~~V~~~K~DPYlNvD~GtmsP~eHGEvfVt~DG~EtDlDlG~YERFl~~~ 83 (266)
T d1s1ma2 4 NYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTK 83 (266)
T ss_dssp EEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECCSCSCGGGSCTTTSCCCEECTTSCEECTHHHHHHHHCSSC
T ss_pred eEEEEeCCcccccchHHHHHHHHHHHHhCCceeEEEecccceecCCCCCCchhhceeEEeccccccccCccceeccCCCC
Confidence 4666777 789999999999999999999999988777651 10 0 01233343333332
Q ss_pred eeecCC--------------------CC------CHHHHHHHHHHHHHhCCCCeEEEcCCC---CccchHHHHHHHHHHH
Q psy2881 157 VISEKK--------------------IT------DPAAIAFNAINIAQKKNTDIVIVDTSG---RLSTQSHLMRELKKIK 207 (302)
Q Consensus 157 ~~~~~~--------------------~~------~~~~~~~~~la~al~~~~~llllDEP~---d~~~~~~l~~~L~~l~ 207 (302)
+-...+ +. .....+.+.|. ....+||++|+.=-| |..+ .-+++.++++.
T Consensus 84 l~~~~niTtGkiy~~Vi~kER~G~yLG~TVQvIPHiTdeIk~~I~-~~~~~~Di~ivEiGGTVGDIEs-~pFlEAiRQl~ 161 (266)
T d1s1ma2 84 MSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVL-EGGEGHDVVLVEIGGTVGDIES-LPFLEAIRQMA 161 (266)
T ss_dssp CCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHH-HHHTTCSEEEEEECSCTTSSTT-HHHHHHHHHHH
T ss_pred CcCccccchhHHHHHHHHHhhccccccCcccccCchHHHHHHHHH-hcCCCCCEEEEeccceechhhc-chHHHHHHHHH
Confidence 211000 00 00111112232 345789999996443 7654 55889999998
Q ss_pred HHhchhhccccc
Q psy2881 208 KVIEKKIFELPY 219 (302)
Q Consensus 208 ~~~~~~i~~~~h 219 (302)
...+.-.++.-|
T Consensus 162 ~e~g~~n~~~iH 173 (266)
T d1s1ma2 162 VEIGREHTLFMH 173 (266)
T ss_dssp HHHCTTSEEEEE
T ss_pred HhcCCCCEEEEe
Confidence 877766555556
No 351
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=21.96 E-value=39 Score=28.80 Aligned_cols=36 Identities=25% Similarity=0.440 Sum_probs=25.8
Q ss_pred eEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCC
Q psy2881 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138 (302)
Q Consensus 100 ~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~ 138 (302)
....|.|.+||+||-+++.|+. ..+..+.+...+..
T Consensus 29 ~~~~L~GlsgS~ka~~~A~l~~---~~~rp~LvVt~~~~ 64 (408)
T d1c4oa1 29 RFVTLLGATGTGKTVTMAKVIE---ALGRPALVLAPNKI 64 (408)
T ss_dssp SEEEEEECTTSCHHHHHHHHHH---HHTCCEEEEESSHH
T ss_pred CcEEEecCCCCHHHHHHHHHHH---HhCCCEEEEeCCHH
Confidence 3578999999999988776654 33456777765543
No 352
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.93 E-value=50 Score=24.20 Aligned_cols=47 Identities=19% Similarity=0.184 Sum_probs=36.9
Q ss_pred HHHHHHhHhhhCCCeEEEecccCCChhHHHHHHHhcccCCCCeeecC
Q psy2881 115 TIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEK 161 (302)
Q Consensus 115 ll~~Lag~~~~~~g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~ 161 (302)
.+..++.++...+.-+.+.|....+.++.+.+..+.+..++|++...
T Consensus 19 ~i~~~~~~l~~AkrPvii~G~g~~~~~a~~~l~~lae~~~~Pv~tt~ 65 (179)
T d1pvda1 19 VIDTILALVKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVTP 65 (179)
T ss_dssp HHHHHHHHHHHCSSEEEEECGGGTTTSTHHHHHHHHHHHCCCEEECG
T ss_pred HHHHHHHHHHhCCCCEEEEecccchhhhHHHHHHHHHhhCceEEecc
Confidence 46667777777778888888888888888888888888888876543
No 353
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=20.82 E-value=46 Score=24.41 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=27.5
Q ss_pred CCeEEEEEcCCCCCHHHHHHHHHhHhhhCCCeEEEecccCCChh
Q psy2881 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAA 141 (302)
Q Consensus 98 ~g~ii~lvGpnGsGKTTll~~Lag~~~~~~g~V~l~~~d~~~~~ 141 (302)
+|..+.|+|-.|+||+-. ..+....-.+|.+.+.+..+..
T Consensus 17 ~~k~vlIlGaGGaarai~----~al~~~g~~~i~i~nR~~~~~~ 56 (182)
T d1vi2a1 17 KGKTMVLLGAGGASTAIG----AQGAIEGLKEIKLFNRRDEFFD 56 (182)
T ss_dssp TTCEEEEECCSHHHHHHH----HHHHHTTCSEEEEEECSSTTHH
T ss_pred CCCEEEEECCcHHHHHHH----HHHhhcCCceEeeeccchHHHH
Confidence 467899999999998743 3333334458999887765543
No 354
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=20.12 E-value=1e+02 Score=20.59 Aligned_cols=68 Identities=13% Similarity=0.145 Sum_probs=34.3
Q ss_pred CeEEEecccCCChhHHHHHHHhcccCCCCeeecCCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCccchHHHHHHHHH
Q psy2881 128 KSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKK 205 (302)
Q Consensus 128 g~V~l~~~d~~~~~~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~la~al~~~~~llllDEP~d~~~~~~l~~~L~~ 205 (302)
.+|.+.+-+. ..++.+..+-+..|..+.....+ . +++.......|+++|+|=---..+-.++.+.+++
T Consensus 2 krILvVDD~~---~~~~~l~~~L~~~g~~v~~a~~g---~----eal~~~~~~~~dlillD~~mP~~~G~el~~~lr~ 69 (119)
T d1peya_ 2 EKILIVDDQS---GIRILLNEVFNKEGYQTFQAANG---L----QALDIVTKERPDLVLLDMKIPGMDGIEILKRMKV 69 (119)
T ss_dssp CEEEEECSCH---HHHHHHHHHHHHTTCEEEEESSH---H----HHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHH
T ss_pred CEEEEEeCCH---HHHHHHHHHHHHcCCEEEEeCCH---H----HHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHH
Confidence 3677776443 22334444444556555544332 1 2233334568999999965311223344444443
Done!