RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2881
(302 letters)
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 212 bits (540), Expect = 2e-69
Identities = 111/211 (52%), Positives = 158/211 (74%)
Query: 91 PLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILG 150
PL + PFVI++VGVNGVGKTTTIGKLA F+++ KSV+LAA DTFRAAA EQL + G
Sbjct: 1 PLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWG 60
Query: 151 KYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVI 210
+ N++PVI++ D A++ F+AI A+ +N D++I DT+GRL +SHLM ELKKI +V+
Sbjct: 61 QRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVM 120
Query: 211 EKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKY 270
+K E P+E+ L ID +TGQN +SQ K F + + +TG+ +TKLDGT KGG++ ++A ++
Sbjct: 121 KKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQF 180
Query: 271 SIPLYFIGIGEKIEDLQIFNAVDFVNALLNQ 301
IP+ +IG+GE+IEDL+ F A DF+ AL +
Sbjct: 181 GIPIRYIGVGERIEDLRPFKADDFIEALFAR 211
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 202 bits (514), Expect = 2e-65
Identities = 98/202 (48%), Positives = 137/202 (67%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPV 157
K V+++VGVNGVGKTTTI KL Y++ K V+ A DTFRAA QL GK +PV
Sbjct: 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPV 64
Query: 158 ISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFEL 217
I + TDPAA+A++A+ + + D++ VDT+GRL T+ +LM ELKK+K+ I K E
Sbjct: 65 IQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEE 124
Query: 218 PYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFI 277
P E++L++D TGQN L Q K+F + + +TG+I+TKLDGT KGG+L I + +P+ F+
Sbjct: 125 PKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFV 184
Query: 278 GIGEKIEDLQIFNAVDFVNALL 299
G+GE +DLQ F+ FV ALL
Sbjct: 185 GVGEGPDDLQPFDPEAFVEALL 206
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 200 bits (509), Expect = 1e-64
Identities = 113/213 (53%), Positives = 149/213 (69%)
Query: 89 EKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLI 148
+ L PFVIM+VGVNG GKTT+ GKLA F KSV+LAA DTFRAAA EQL I
Sbjct: 1 DTKLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKI 60
Query: 149 LGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKK 208
G+ VIS + DPAA+AF+A+ A +N D+VI+DT+GRL T+ +LM EL+K+ +
Sbjct: 61 WGERVGATVISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHR 120
Query: 209 VIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAK 268
V++KKI + P+E L+ID TGQN L Q K F + + +TG+I+TKLDGT KGGI AIA+
Sbjct: 121 VVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIILTKLDGTAKGGITLAIAR 180
Query: 269 KYSIPLYFIGIGEKIEDLQIFNAVDFVNALLNQ 301
+ IP+ FIG+GEK EDL+ F+ FV LL++
Sbjct: 181 ELGIPIKFIGVGEKAEDLRPFDPEAFVEVLLSE 213
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 180 bits (458), Expect = 5e-57
Identities = 80/216 (37%), Positives = 115/216 (53%), Gaps = 8/216 (3%)
Query: 89 EKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLI 148
++P + P+VIM+VGV G GK TT GKLA ++KK+ V L D +R AA EQL
Sbjct: 2 KEPKVIPDKIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQ 61
Query: 149 LGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMR--ELKKI 206
LG+ VPV E D IA + + +I+IVDT+GR E+K I
Sbjct: 62 LGQQIGVPVYGEPGEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNI 121
Query: 207 KKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAI 266
+ I+ P E+ L+ID + GQ +F++ +I +IITK+DGT KGG +
Sbjct: 122 YEAIK------PDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAKGGGALSA 175
Query: 267 AKKYSIPLYFIGIGEKIEDLQIFNAVDFVNALLNQN 302
+ FIG GEKI++L++FN FV L + +
Sbjct: 176 VAATGATIKFIGTGEKIDELEVFNPRRFVARLHHHH 211
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 177 bits (451), Expect = 6e-56
Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 7/211 (3%)
Query: 89 EKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLI 148
E L K + +VG+ G GKTTT KLA Y+K + + LL A DT R AA EQL +
Sbjct: 1 EARLPVLK-DRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRL 59
Query: 149 LGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKK 208
LG+ VPV+ P +I A+ + D+++VDT+GRL LM EL ++K+
Sbjct: 60 LGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKE 119
Query: 209 VIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAK 268
V+ P E+ L++D TGQ LS + F + + +TGL++TKLDG +GG +
Sbjct: 120 VLG------PDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARH 173
Query: 269 KYSIPLYFIGIGEKIEDLQIFNAVDFVNALL 299
P+YF G+ EK E L+ F +L
Sbjct: 174 VTGKPIYFAGVSEKPEGLEPFYPERLAGRIL 204
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 106 bits (266), Expect = 8e-29
Identities = 24/198 (12%), Positives = 68/198 (34%), Gaps = 11/198 (5%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISE 160
V+++ GV GVG TT+ + +K + + + + ++ ++ + + +
Sbjct: 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMDP 62
Query: 161 KKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYE 220
+ +A IA+ V VDT +ST + L + EL +
Sbjct: 63 ETQKRIQKMAGR--KIAEMAKESPVAVDTHSTVSTPKGYLPGLPSW------VLNELNPD 114
Query: 221 IFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGIG 280
+ ++++ + + ++ + +++ + + + + +
Sbjct: 115 LIIVVETTGDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQNR 174
Query: 281 EKIEDLQIFNAVDFVNAL 298
+ D + N L
Sbjct: 175 NGLLD---QAVEELTNVL 189
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 104 bits (260), Expect = 8e-28
Identities = 28/196 (14%), Positives = 58/196 (29%), Gaps = 9/196 (4%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSV-LLAACDTFRAAAYEQLLILGKYNDVPVIS 159
+ ++ G+ GVGK+T + K+ + + ++ D A A + + +
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSV 62
Query: 160 EKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPY 219
EK+ A A+ + +DT + T S + L P
Sbjct: 63 EKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPS-----YVITEINPS 117
Query: 220 EIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKKYSIPLYFIGI 279
IFL+ + + + + A A + I
Sbjct: 118 VIFLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGSTVKVIVN 177
Query: 280 GEKIEDL---QIFNAV 292
E + +I ++
Sbjct: 178 VEGDPSIAANEIIRSM 193
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 75.4 bits (184), Expect = 7e-17
Identities = 24/217 (11%), Positives = 64/217 (29%), Gaps = 22/217 (10%)
Query: 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVI 158
P +I++VG+ GKT KL Y +R + +
Sbjct: 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEE 61
Query: 159 -SEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMREL----------KKIK 207
+ + A + ++ + + D + + ++ +
Sbjct: 62 GLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESI 121
Query: 208 KVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIA 267
V + I ++ L +++ ++F + + LD + +
Sbjct: 122 CVDPEVIAANIVQVKLGSPDYVNRDSDEATEDFMRRIECYENSYESLDEEQDRDL--SYI 179
Query: 268 KKYSIPLYFIGIGEKIEDLQIFNAVD--FVNALLNQN 302
K + +G+ ++ + + V L+N +
Sbjct: 180 K-------IMDVGQSYVVNRVADHIQSRIVYYLMNIH 209
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 72.0 bits (175), Expect = 1e-15
Identities = 25/177 (14%), Positives = 46/177 (25%), Gaps = 29/177 (16%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF---------------------- 138
+ + G GVGKTT I K + K V +
Sbjct: 3 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLS 62
Query: 139 RAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSH 198
R V+ A + + + ++D G++ S
Sbjct: 63 RVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQ 122
Query: 199 LMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLD 255
L + ++ P I L L+ ++E + +TK +
Sbjct: 123 LFIQAV-------RQTLSTPGTIILGTIPVPKGKPLALVEEIRNRKDVKVFNVTKEN 172
>d2qy9a1 a.24.13.1 (A:201-284) Signal recognition particle
receptor, FtsY {Escherichia coli [TaxId: 562]}
Length = 84
Score = 59.0 bits (143), Expect = 4e-12
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 12 SLSKTACNL----KSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKL 67
SL KT NL SL KKID +L+ ELE LL ADVG ETT+ ++ L + K+L
Sbjct: 2 SLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQL 61
Query: 68 FNTEQVRNVLHNLLVNLLKSLEK 90
+ E + +L + +L +++
Sbjct: 62 RDAEALYGLLKEEMGEILAKVDE 84
>d1vmaa1 a.24.13.1 (A:1-81) Signal recognition particle receptor,
FtsY {Thermotoga maritima [TaxId: 2336]}
Length = 81
Score = 53.2 bits (128), Expect = 4e-10
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 5 WITRLKESLSKTACN----LKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKK 60
LK+ L KT + L+ KK+D ELE L++ADVG ETT+++L L++
Sbjct: 3 LFDFLKKGLQKTKETFFGRVVKLLKGKKLDDETREELEELLIQADVGVETTEYILERLEE 62
Query: 61 IIYSKKLFNTEQVRNVL 77
E + +L
Sbjct: 63 KDGDALESLKEIILEIL 79
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 50.0 bits (118), Expect = 1e-07
Identities = 22/201 (10%), Positives = 54/201 (26%), Gaps = 16/201 (7%)
Query: 68 FNTEQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRK 127
F +Q N L++ L L++ + P ++ G G GKT+ + +
Sbjct: 6 FTDKQFENRLNDNLEELIQGKKAV-----ESPTAFLLGGQPGSGKTSLRSAIFEETQGNV 60
Query: 128 KSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIV 187
+ DTF+ ++ Y + + + I+ + ++VI
Sbjct: 61 IVI---DNDTFKQQHPNFDELVKLY--EKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIE 115
Query: 188 DTSGRLSTQSHLMRELKKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRIT 247
T L+ + + +P + ++
Sbjct: 116 GTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYL------GTIERYETMYADDPMTA 169
Query: 248 GLIITKLDGTTKGGILAAIAK 268
+ + +
Sbjct: 170 RATPKQAHDIVVKNLPTNLET 190
>d1okkd1 a.24.13.1 (D:21-78) Signal recognition particle receptor,
FtsY {Thermus aquaticus [TaxId: 271]}
Length = 58
Score = 43.5 bits (103), Expect = 6e-07
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 28 KIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLK 86
+ + ELE LL ADVG T+ +L E++ + ++ + LV +L+
Sbjct: 6 GNLEEVLEELEMALLAADVGLSATEEILQEVRASG-------RKDLKEAVKEKLVGMLE 57
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 39.9 bits (92), Expect = 2e-04
Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 4/126 (3%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISE 160
I G G+GK+TT L + K V++ CD + ++ I E
Sbjct: 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADS----TRLILHSKAQNTIME 59
Query: 161 KKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYE 220
++ + + V++ G R + +E++
Sbjct: 60 MAAEAGTVEDLELEDVLKAGYGGVKCVESGGPEPGVGCAGRGVITAINFLEEEGAYEDDL 119
Query: 221 IFLIID 226
F+ D
Sbjct: 120 DFVFYD 125
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 39.5 bits (91), Expect = 3e-04
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 84 LLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFR 139
++ L ++ + + + I GV GVGK+TTI L + V + A D
Sbjct: 36 AVRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSS 91
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 39.6 bits (91), Expect = 3e-04
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD 136
P + G GVGKT+ A ++ K VLL + D
Sbjct: 8 PPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTD 45
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 39.4 bits (90), Expect = 3e-04
Identities = 11/43 (25%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Query: 101 VIMIV-GVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAA 142
I + G G GKTT L + V + D A
Sbjct: 3 TITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANL 45
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 39.5 bits (91), Expect = 3e-04
Identities = 10/56 (17%), Positives = 18/56 (32%)
Query: 84 LLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFR 139
L L ++ + + G G GK+T + + V + A D
Sbjct: 39 LSTQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 94
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 38.8 bits (89), Expect = 5e-04
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD 136
+IM++G GVGKTT +A V L D
Sbjct: 22 LIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 38.0 bits (87), Expect = 9e-04
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD 136
+ I G G+GK+TT L + K++++ CD
Sbjct: 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 37.8 bits (86), Expect = 0.001
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 101 VIMIV-GVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAA 142
+I IV G G GKTT L+ R + VL D A
Sbjct: 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANL 46
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 36.4 bits (83), Expect = 0.001
Identities = 14/164 (8%), Positives = 40/164 (24%), Gaps = 14/164 (8%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISE 160
V +VG GKTT + K + V + ++
Sbjct: 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPARPEGVDSVRHERAGAVA 62
Query: 161 KKITDPAAIAFNA----------INIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVI 210
+ + + + + D+V+V+ + + + +
Sbjct: 63 TAVEGDGLLQLHLRRPLWRLDDVLALYAPLRLDLVLVEGYKQ----ERHPKVVLVRSEED 118
Query: 211 EKKIFELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKL 254
+ L +I + + ++ ++
Sbjct: 119 WASLQHLANIRAVIAWEPLEGPLAHPVFSLADDDEYIPWLMNEV 162
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 36.2 bits (82), Expect = 0.002
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
I I GV+G GK T + KL+ F+ +SV
Sbjct: 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVAT 33
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 35.3 bits (80), Expect = 0.004
Identities = 9/46 (19%), Positives = 14/46 (30%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQL 146
++ +G GKTT + KL R L +
Sbjct: 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPG 49
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 34.9 bits (80), Expect = 0.007
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138
K +I + G +G G +T F++ + D F
Sbjct: 3 KHPIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 34.5 bits (78), Expect = 0.009
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
+ +I++ GV+ GK+T KL L
Sbjct: 2 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 36
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 34.3 bits (77), Expect = 0.009
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 88 LEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTF 138
+ L K V+ I G++ GKTT +L+ +++ SV + D
Sbjct: 11 CKTILAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDH 61
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 34.2 bits (77), Expect = 0.010
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRK 127
+PF ++I G G GKTT + Y
Sbjct: 8 QPFTVLIEGNIGSGKTTYLNHFEKYKNDIC 37
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 33.8 bits (76), Expect = 0.019
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLA 133
+++ VG G GKTT G+ Y + K +
Sbjct: 2 IVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVN 34
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 33.8 bits (77), Expect = 0.020
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
I + G G+GKTT + ++F +LL
Sbjct: 8 IYLDGAYGIGKTTAAEEFLHHFAITPNRILL 38
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 32.4 bits (72), Expect = 0.030
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYND 154
+I+ +G G GK+T + K + D ++ + KY
Sbjct: 4 IILTIGCPGSGKSTWAREF---IAKNPGFYNINRDDYRQSIMAHEERDEYKYTK 54
>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 178
Score = 32.3 bits (73), Expect = 0.040
Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 103 MI-VGVNGVGKTTTIGKL-ANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISE 160
M+ V VNG G TIGK A+ K+ L+ + YE + + + V +
Sbjct: 1 MVNVAVNGYG---TIGKRVADAIIKQPDMKLVGVAK--TSPNYEAFIAHRRGIRIYVPQQ 55
Query: 161 KKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVI 210
+ A + T ++VDT+ + L+ + I
Sbjct: 56 SIKKFEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAI 105
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 32.6 bits (74), Expect = 0.053
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
I + GV G+GK+TT +A+ ++
Sbjct: 5 TIVRIYLDGVYGIGKSTTGRVMASAASGGSPTLYF 39
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 31.8 bits (71), Expect = 0.055
Identities = 24/159 (15%), Positives = 47/159 (29%), Gaps = 14/159 (8%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPV 157
P V++ VG G GK+T I + + ++ + L GK +
Sbjct: 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKRVVIDN 72
Query: 158 ISEKKITDPAAIAFNA--------------INIAQKKNTDIVIVDTSGRLSTQSHLMREL 203
+ + I I A+ N + D S + +
Sbjct: 73 TNPDVPSRARYIQCAKDAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMVMFSYR 132
Query: 204 KKIKKVIEKKIFELPYEIFLIIDGNTGQNTLSQIKEFSK 242
K+ + + F EI + + ++FS+
Sbjct: 133 KQFEPPTLAEGFLEILEIPFRLQEHLDPALQRLYRQFSE 171
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 32.2 bits (72), Expect = 0.055
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKS 129
PF+I + G GK++ K+ + +
Sbjct: 2 PFLIGVSGGTASGKSSVCAKIVQLLGQNEVD 32
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 31.9 bits (71), Expect = 0.057
Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 79 NLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123
N+ ++ L + K I+I+G++G GKTT + +L
Sbjct: 2 NIFSSMFDKL-----WGSNKELRILILGLDGAGKTTILYRLQIGE 41
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli
[TaxId: 562]}
Length = 224
Score = 32.0 bits (71), Expect = 0.059
Identities = 7/32 (21%), Positives = 9/32 (28%), Gaps = 1/32 (3%)
Query: 102 IMIVGVN-GVGKTTTIGKLANYFKKRKKSVLL 132
+ G + VGKT L K
Sbjct: 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAG 35
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 31.1 bits (69), Expect = 0.11
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 95 KKCKPFVIMIVGVNGVGKTTTIGKLANYFK 124
+K KP V+ ++G G GK T + F
Sbjct: 2 EKSKPNVVFVLGGPGSGKGTQCANIVRDFG 31
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 31.3 bits (70), Expect = 0.12
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 95 KKCKPFVIMIVGVNGVGKTTTIGKLANYFKKR---KKSVLLAACDTF 138
P I G G GK+ T ++ N+ ++ +KS+ A+ D F
Sbjct: 23 GNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 31.0 bits (69), Expect = 0.12
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSV 130
I+I G++ GKTT L + K +
Sbjct: 6 ILIEGLDRTGKTTQCNILYKKLQPNCKLL 34
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 30.3 bits (67), Expect = 0.16
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD 136
I+I G GVGKTT + K+ KR
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVR 37
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 30.3 bits (67), Expect = 0.18
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
I+I G+ G GKTT + ++ ++
Sbjct: 5 IVIEGLEGAGKTTARNVVVETLEQLGIRDMV 35
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 30.3 bits (67), Expect = 0.19
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRA 140
I+I G +G GK+T + KL + + + T RA
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRA 42
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 30.4 bits (67), Expect = 0.20
Identities = 10/43 (23%), Positives = 15/43 (34%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRA 140
+ + + G++G GKTT L Y D R
Sbjct: 18 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQ 60
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 29.9 bits (66), Expect = 0.24
Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKY 152
P V+ ++G G GK T ++ + L+A + R G+
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKY----GYTHLSAGELLRDERKNPDSQYGEL 50
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 30.0 bits (66), Expect = 0.24
Identities = 16/139 (11%), Positives = 38/139 (27%), Gaps = 12/139 (8%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISE 160
+ +I G GVGK+T + + D P
Sbjct: 4 LYIITGPAGVGKST----TCKRLAAQLDNSAYIEGDIINHMVVG--------GYRPPWES 51
Query: 161 KKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYE 220
++ + + + V++D L + ++ +E + L
Sbjct: 52 DELLALTWKNITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTN 111
Query: 221 IFLIIDGNTGQNTLSQIKE 239
++ + + Q+ E
Sbjct: 112 REELLRRDALRKKDEQMGE 130
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 30.0 bits (66), Expect = 0.25
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 99 PFVIMIVGVNGVGKTTTIGKLANYFKKRK 127
P + I G VGK+T + L + +
Sbjct: 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWH 30
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 29.7 bits (65), Expect = 0.27
Identities = 6/32 (18%), Positives = 11/32 (34%)
Query: 95 KKCKPFVIMIVGVNGVGKTTTIGKLANYFKKR 126
+ + F I + G GK L ++
Sbjct: 2 RATQGFTIFLTGYMNSGKDAIARALQVTLNQQ 33
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 30.4 bits (68), Expect = 0.28
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRK 127
+ I G +G+GKTTT L +
Sbjct: 6 RVYIDGPHGMGKTTTTQLLVALGSRDD 32
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 30.3 bits (67), Expect = 0.28
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
+++ G G GK+ + +LA R +++
Sbjct: 53 LLVNGATGTGKSVLLRELAYTGLLRGDRMVI 83
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 29.7 bits (65), Expect = 0.32
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFK 124
+ I+G GK+ + KLA F
Sbjct: 10 VAILGGESSGKSVLVNKLAAVFN 32
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 29.6 bits (65), Expect = 0.33
Identities = 7/47 (14%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLL 147
+I++ G + GK+ + L + + + D+ A ++
Sbjct: 5 MIILNGGSSAGKSGIVRCLQSVLPEPWLAF---GVDSLIEAMPLKMQ 48
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 29.3 bits (64), Expect = 0.37
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYF 123
+ ++++G++ GKTT + K
Sbjct: 1 RELRLLMLGLDNAGKTTILKKFNGED 26
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 29.8 bits (66), Expect = 0.40
Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 5/146 (3%)
Query: 71 EQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130
L+ LL +L++ + I+++G GVGK++T+ + + S
Sbjct: 8 NTFAPATQTKLLELLGNLKQ----EDVNSLTILVMGKGGVGKSSTVNSIIGE-RVVSISP 62
Query: 131 LLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTS 190
+ + + D P + E + A+ + K ++ VD
Sbjct: 63 FQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRL 122
Query: 191 GRLSTQSHLMRELKKIKKVIEKKIFE 216
+ K I K I+
Sbjct: 123 DAYRVDNLDKLVAKAITDSFGKGIWN 148
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 29.2 bits (64), Expect = 0.45
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQL 146
K I I G GK+T +A F L +RAA Y L
Sbjct: 2 KTIQIAIDGPASSGKSTVAKIIAKDF----GFTYLDTGAMYRAATYMAL 46
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 29.1 bits (65), Expect = 0.46
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRA 140
V+ G NG+GKTT + ++ Y K K ++ +
Sbjct: 29 VVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKV 68
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 29.3 bits (65), Expect = 0.47
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 95 KKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKK--SVLLAACDTF 138
+ P++I I G VGK+TT L + + V L D F
Sbjct: 76 GQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 29.2 bits (65), Expect = 0.47
Identities = 30/208 (14%), Positives = 61/208 (29%), Gaps = 41/208 (19%)
Query: 98 KPFV-IMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVP 156
KP V + +G GKTT L +V + A E+
Sbjct: 1 KPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEER----------- 49
Query: 157 VISEKKIT-DPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIF 215
+ IT + A + + + VD G +++ ++ I
Sbjct: 50 ---ARGITINTAHVEY------ETAKRHYSHVDCPGHADYIKNMITGAAQMDGAI----- 95
Query: 216 ELPYEIFLIIDGNTGQNTLSQIKEFSKILRITGL-----IITKLDGTTKGGILAAIAKKY 270
L++ G + Q +E + R G+ + K+D +L + +
Sbjct: 96 -------LVVSAADGP--MPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEV 146
Query: 271 SIPLYFIGIGEKIEDLQIFNAVDFVNAL 298
L + +A+ + +
Sbjct: 147 RDLLNQYEFPGDEVPVIRGSALLALEQM 174
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 29.3 bits (64), Expect = 0.49
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLL 147
+ +++G+ GK++ I N + L + +Y+ L
Sbjct: 31 ITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFL 77
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 28.8 bits (63), Expect = 0.57
Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 81 LVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLAN 121
L+++L+ L+ + I+++G++ GKTT + +LA+
Sbjct: 2 LLSILRKLKSA----PDQEVRILLLGLDNAGKTTLLKQLAS 38
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 28.8 bits (63), Expect = 0.60
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Query: 83 NLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123
+L + F K I+++G++ GKTT + KL
Sbjct: 2 KVLSKI-----FGN-KEMRILMLGLDAAGKTTILYKLKLGQ 36
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 29.0 bits (63), Expect = 0.63
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 84 LLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKK 128
L L L ++G G GKT T+ KL +K +
Sbjct: 28 LDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTT 72
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 28.5 bits (62), Expect = 0.67
Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQ 145
+ +++GV+G GK+ +A+ + + L E+
Sbjct: 5 DHHIYVLMGVSGSGKSA----VASEVAHQLHAAFLDGDFLHPRRNIEK 48
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 28.8 bits (63), Expect = 0.69
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 94 FKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGK 151
F + VI ++G G GK T KL + V L+A D RA G+
Sbjct: 3 FSPDQVSVIFVLGGPGAGKGTQCEKLVKDY----SFVHLSAGDLLRAEQGRAGSQYGE 56
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 28.4 bits (62), Expect = 0.73
Identities = 8/42 (19%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAA 142
++++ G G GK+T LA + D
Sbjct: 6 ILLLSGHPGSGKSTIAEALA---NLPGVPKVHFHSDDLWGYI 44
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 28.5 bits (62), Expect = 0.78
Identities = 19/176 (10%), Positives = 46/176 (26%), Gaps = 2/176 (1%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAA-YEQLLILGKYNDVP 156
+ IVG VGK+T + N + + D + +
Sbjct: 7 DAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGL 66
Query: 157 VISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFE 216
+ N + + D+V++ R +++ +
Sbjct: 67 RRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVV 126
Query: 217 LPYEIFLIIDGNTGQNTLSQIKEFSKILRITGLI-ITKLDGTTKGGILAAIAKKYS 271
++ +E + + LI + G ++ A+ Y+
Sbjct: 127 FNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNLAYA 182
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 28.4 bits (62), Expect = 0.81
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130
V+++ G + VGK+T + L SV
Sbjct: 4 VVVLSGPSAVGKSTVVRCLRERIPNLHFSV 33
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 28.6 bits (62), Expect = 0.87
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 98 KPFVIMIVGVNGVGKTTTI 116
K + +I+G NG GK++ +
Sbjct: 22 KEGINLIIGQNGSGKSSLL 40
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 28.3 bits (62), Expect = 0.97
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFK 124
P +MI G GK T + ++
Sbjct: 2 DPLKVMISGAPASGKGTQCELIKTKYQ 28
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 28.1 bits (61), Expect = 0.99
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
+ I+I+G++G GKTT + +L
Sbjct: 4 REMRILILGLDGAGKTTILYRLQV 27
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 28.0 bits (62), Expect = 1.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFR 139
++ ++G NG GKTTT+ +A + +K ++ D
Sbjct: 34 IVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITN 72
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 27.9 bits (61), Expect = 1.2
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
V ++ G G GKTT + + N K +V+
Sbjct: 5 VTLLTGFLGAGKTTLLRHILNEQHGYKIAVIE 36
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 28.2 bits (61), Expect = 1.2
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 99 PFVIMIVGVNGVGKTTTIGKLANYF 123
++I + G+G I L+ Y
Sbjct: 24 HHALLIQALPGMGDDALIYALSRYL 48
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 27.8 bits (60), Expect = 1.2
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 95 KKCKPFVIMIVGVNGVGKTTTIGKLAN 121
+K + IVG VGK+T + L
Sbjct: 1 EKTYSGFVAIVGKPNVGKSTLLNNLLG 27
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 28.1 bits (61), Expect = 1.2
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSV 130
I I G GK+T + L + +
Sbjct: 5 ISIEGNIAAGKSTFVNILKQLCEDWEVVP 33
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 28.0 bits (62), Expect = 1.3
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLI 148
+ ++G NG GKTTT+ ++ K V + + + LI
Sbjct: 30 IFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLI 77
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 1.4
Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 83 NLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANY 122
L + + +F + ++IVG++ GKTT + + +
Sbjct: 2 ILFTRIWR--LFNH-QEHKVIIVGLDNAGKTTILYQFSMN 38
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 183
Score = 27.6 bits (60), Expect = 1.4
Identities = 5/36 (13%), Positives = 14/36 (38%)
Query: 170 AFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKK 205
+ + N DI +V+ + ++ ++ K
Sbjct: 11 SLGVVRDFMLANPDISLVNEGANALDNTRMIVDMLK 46
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 222
Score = 27.9 bits (61), Expect = 1.4
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 3/109 (2%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEK 161
+ G GK+T IG+L + K + L A + + + + +E+
Sbjct: 12 FLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVDGLQAER 71
Query: 162 KITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVI 210
+ +A+ + A++K +I DT G ++ I
Sbjct: 72 EQGITIDVAYRYFSTAKRK---FIIADTPGHEQYTRNMATGASTCDLAI 117
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 28.0 bits (62), Expect = 1.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
VI IVG +G GK+T + ++ VL+
Sbjct: 31 VIGIVGRSGSGKSTLTKLIQRFYIPENGQVLI 62
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 27.8 bits (61), Expect = 1.5
Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Query: 93 IFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKK--SVLLAACDTFRAAAYEQLLILG 150
I + + G +GVGK++ + ++ R S L G
Sbjct: 91 IIPHFQDKTTVFAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTSGG 150
Query: 151 KYNDVPVISEKKITDPAA 168
D P S + TD
Sbjct: 151 LVADTPGFSSLEFTDIEE 168
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 28.2 bits (62), Expect = 1.5
Identities = 21/175 (12%), Positives = 54/175 (30%), Gaps = 13/175 (7%)
Query: 35 NELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNLLKSLEKPLIF 94
N+L S F T + ++++ + + + ++ + + + LK ++
Sbjct: 1 NDLPSSFTGYFKKFNTGRKIISQ-EILNLIELRMRAGNIQLTN-SAISDALKEIDS---- 54
Query: 95 KKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYND 154
+ + G G GK++ I L + + + A +
Sbjct: 55 ---SVLNVAVTGETGSGKSSFINTLRGIGNEEEGA---AKTGVVEVTMERHPYKHPNIPN 108
Query: 155 VPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQ-SHLMRELKKIKK 208
V I + + D I+ ++ R + + + +KK
Sbjct: 109 VVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMKK 163
>d1zrua1 b.21.1.3 (A:162-264) receptor binding protein, rbp,
C-terminal domain {Lactococcus lactis phage p2 [TaxId:
100641]}
Length = 103
Score = 26.8 bits (59), Expect = 1.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 178 QKKNTDIVIVDTSGRLSTQSH 198
KKN D+VIV G +S
Sbjct: 18 TKKNNDLVIVRFFGSVSNIQK 38
>d1j8yf1 a.24.13.1 (F:3-86) Signal sequence recognition protein
Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Length = 84
Score = 26.2 bits (58), Expect = 1.6
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 8 RLKESLSKTACNLKSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKL 67
L++++ K L K ++ EL+ L+ ADV + L N++K+ + ++K
Sbjct: 4 NLRDTVRKF---LTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNEKP 60
Query: 68 FNT----EQVRNVLHNLLVNLL 85
E ++++ L NL
Sbjct: 61 PTYIERREWFIKIVYDELSNLF 82
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 27.8 bits (60), Expect = 1.6
Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 12/123 (9%)
Query: 76 VLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135
+ V +LK K ++ G G GKT+TI L +
Sbjct: 15 TAQDHAVTVLKKT-----LKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLM---KSR 66
Query: 136 DTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLST 195
A+ E+ G + + + + + I+I+D + ++
Sbjct: 67 ILELNASDER----GISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA 122
Query: 196 QSH 198
+
Sbjct: 123 DAQ 125
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.4 bits (59), Expect = 1.7
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 92 LIFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123
L K K ++ +G++ GKTT + L +
Sbjct: 7 LGLYK-KTGKLVFLGLDNAGKTTLLHMLKDDR 37
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 27.8 bits (60), Expect = 1.8
Identities = 9/55 (16%), Positives = 16/55 (29%), Gaps = 5/55 (9%)
Query: 71 EQVRNVLHNLLVNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKK 125
+ + L LL + + +G G+GKTT +
Sbjct: 23 GEAEALARIYLNRLLSGAGLSDV-----NMIYGSIGRVGIGKTTLAKFTVKRVSE 72
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 27.6 bits (61), Expect = 1.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 101 VIMIVGVNGVGKTTTI 116
V +I+G NG GK+T I
Sbjct: 32 VTLIIGPNGSGKSTLI 47
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 27.0 bits (58), Expect = 1.9
Identities = 6/31 (19%), Positives = 13/31 (41%), Gaps = 6/31 (19%)
Query: 93 IFKKCKPFVIMIVGVNGVGKTTTIGKLANYF 123
++K ++++G GVGK+
Sbjct: 1 VYK------VLLLGAPGVGKSALARIFGGVE 25
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 27.0 bits (58), Expect = 2.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 102 IMIVGVNGVGKTTTIGKLAN 121
++ +G++ GKTT + L N
Sbjct: 3 LLFLGLDNAGKTTLLHMLKN 22
>d2jfga3 c.72.2.1 (A:94-297)
UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
{Escherichia coli [TaxId: 562]}
Length = 204
Score = 27.4 bits (59), Expect = 2.1
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 92 LIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130
L ++ + ++ I G N GK+T + K +V
Sbjct: 4 LFCREAQAPIVAITGSN--GKSTVTTLVGEMAKAAGVNV 40
>d1ls1a1 a.24.13.1 (A:1-88) Signal sequence recognition protein
Ffh {Thermus aquaticus [TaxId: 271]}
Length = 88
Score = 25.8 bits (57), Expect = 2.1
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 9 LKESLSKTACNL--KSLIVNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKK 66
L L + L + I + + L E+ L+ ADV E + + +++ K+
Sbjct: 5 LSARLQEAIGRLRGRGRITEEDLKATL-REIRRALMDADVNLEVARDFVERVREEALGKQ 63
Query: 67 LFNT----EQVRNVLHNLLVNLL 85
+ + E + ++ L L
Sbjct: 64 VLESLTPAEVILATVYEALKEAL 86
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 162
Score = 26.8 bits (58), Expect = 2.2
Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 168 AIAFNAINIAQKKNTDIVIVDTSGRLSTQSHL-----MRELKKIKKVIEKKIFELPYEIF 222
I ++ + I GR + + +++++K +I ELP +I
Sbjct: 99 VINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIA 158
Query: 223 LIID 226
+++
Sbjct: 159 TLLN 162
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 26.9 bits (58), Expect = 2.2
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 95 KKCKPFVIMIVGVNGVGKTTTIGKLANYFK 124
++ K I+I G G GKT+ +A
Sbjct: 1 EQPKGINILITGTPGTGKTSMAEMIAAELD 30
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 27.3 bits (60), Expect = 2.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
+I+G G GKT + +A + +LL
Sbjct: 28 YFVILGPTGAGKTLFLELIAGFHVPDSGRILL 59
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia
coli, RepD [TaxId: 562]}
Length = 306
Score = 27.4 bits (59), Expect = 2.3
Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 102 IMIVGVNGVGKTTTI-GKLANYFKKRKKSVLLAACDTF-RAAAYEQLLILGKYNDVPVIS 159
+++ G GKT I K+A+ + A TF AA E +G+
Sbjct: 17 CLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRKEAR 76
Query: 160 EKKITDPAAIAFNAINIAQKK---NTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFE 216
I+ + + I + + D + +L+ L L + KV+ +++
Sbjct: 77 GLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLIS 136
Query: 217 LPY 219
Sbjct: 137 TIS 139
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 27.2 bits (60), Expect = 2.5
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 101 VIMIVGVNGVGKTTTIGKLA 120
++ +VG NG GK+T + ++A
Sbjct: 27 ILHLVGPNGAGKSTLLARMA 46
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 26.8 bits (58), Expect = 2.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFK 124
K +I +VG G GK T K+ +
Sbjct: 7 KSKIIFVVGGPGSGKGTQCEKIVQKYG 33
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 27.1 bits (58), Expect = 2.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 98 KPFVIMIVGVNGVGKTTTI 116
K + +I+G NG GK++ +
Sbjct: 22 KEGINLIIGQNGSGKSSLL 40
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 27.0 bits (60), Expect = 2.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSV 130
I + G GVGKT I +L N K
Sbjct: 71 IGLFGGAGVGKTVLIMELINNVAKAHGGY 99
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 26.7 bits (58), Expect = 2.9
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKR 126
++++G +GVG+ L R
Sbjct: 6 LVLLGAHGVGRRHIKNTLITKHPDR 30
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 27.2 bits (59), Expect = 2.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 102 IMIVGVNGVGKTTTIGKLA 120
+++ G G GK+T + LA
Sbjct: 31 VLVFGDRGTGKSTAVRALA 49
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 26.8 bits (59), Expect = 3.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
V +VG NG GK+T L N ++ +LL
Sbjct: 42 VTALVGPNGSGKSTVAALLQNLYQPTGGQLLL 73
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 26.8 bits (59), Expect = 3.2
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACD 136
++ VG +G GK+T + +A + +
Sbjct: 28 FVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKR 63
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 26.2 bits (56), Expect = 3.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 102 IMIVGVNGVGKTTTIGKLAN 121
+ +VG+ GKTT + +A+
Sbjct: 5 LTLVGLQYSGKTTFVNVIAS 24
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho,
ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 26.9 bits (59), Expect = 3.4
Identities = 7/34 (20%), Positives = 11/34 (32%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAAC 135
+IV GKT + +A +L
Sbjct: 46 GLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVL 79
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase
MurC {Thermotoga maritima [TaxId: 2336]}
Length = 207
Score = 26.6 bits (57), Expect = 3.5
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 93 IFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130
K+ K + G +G KTTT +A+ K +KS
Sbjct: 8 TLKREKKEEFAVTGTDG--KTTTTAMVAHVLKHLRKSP 43
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 26.3 bits (56), Expect = 3.8
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 82 VNLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANY 122
++ S KP + + I + G + VGK++ I L N
Sbjct: 6 SEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINR 46
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 26.4 bits (57), Expect = 3.8
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKR 126
+++ G +G GK+T + KL
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSI 27
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.4 bits (57), Expect = 3.9
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
+ ++++G GK+T I ++
Sbjct: 1 RELKLLLLGTGESGKSTFIKQMRI 24
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 26.2 bits (56), Expect = 4.0
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Query: 96 KCKPFVIMIVGVNGVGKTTTIGKLAN 121
KCK I++VG + GKT + A
Sbjct: 2 KCK---IVVVGDSQCGKTALLHVFAK 24
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 26.1 bits (56), Expect = 4.1
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
+ + ++G GVGK++ + +
Sbjct: 3 RELKVCLLGDTGVGKSSIMWRFVE 26
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 26.2 bits (56), Expect = 4.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 102 IMIVGVNGVGKTTTIGKLAN 121
I++VG++ GKTT + KL
Sbjct: 3 ILMVGLDAAGKTTILYKLKL 22
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 26.4 bits (58), Expect = 4.2
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
++++G +G GKTTT+ +A + + + +
Sbjct: 31 FMILLGPSGCGKTTTLRMIAGLEEPSRGQIYI 62
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 26.1 bits (56), Expect = 4.5
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 94 FKKCKPFV-IMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGK 151
+ K +P V I +VG GKTT + + + + L A + +
Sbjct: 2 WPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKHSEELKRGMTIKLGYAETNIGVCES 60
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 26.2 bits (57), Expect = 4.6
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 91 PLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLIL- 149
+ + K + + G++GVGK++ + + K R V QLL
Sbjct: 87 EELKEYLKGKISTMAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTAQLLKFD 146
Query: 150 --GKYNDVPVISEKKI 163
G D P + +I
Sbjct: 147 FGGYVVDTPGFANLEI 162
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 26.1 bits (56), Expect = 4.6
Identities = 8/32 (25%), Positives = 17/32 (53%), Gaps = 6/32 (18%)
Query: 90 KPLIFKKCKPFVIMIVGVNGVGKTTTIGKLAN 121
K +FK ++++G GVGK++ + +
Sbjct: 3 KSSLFK------VILLGDGGVGKSSLMNRYVT 28
>d2feaa1 c.108.1.20 (A:2-227)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}
Length = 226
Score = 26.1 bits (56), Expect = 4.7
Identities = 14/210 (6%), Positives = 50/210 (23%), Gaps = 28/210 (13%)
Query: 25 VNKKIDKNLYNELESDLLKADVGFETTQFLLNELKKIIYSKKLFNTEQVRNVLHNLLVNL 84
+ K + L+ +L + + + L +++ + +
Sbjct: 24 IMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGFREF 83
Query: 85 LKSLEKPLIFKKCKP--------------------FVIMIVGVNGVGKTTTIGKLANYFK 124
+ + + I + N
Sbjct: 84 VAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCS 143
Query: 125 KRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEKKITDPAAIAFN-AINIAQKKNTD 183
+ + ++I DV + A + +N +++N +
Sbjct: 144 NQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL----CFARDYLLNECREQNLN 199
Query: 184 IVIVDTSGRLSTQSHLMRELKKIKKVIEKK 213
+ + +K++++ ++ K
Sbjct: 200 HLPYQD---FYEIRKEIENVKEVQEWLQNK 226
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 26.3 bits (57), Expect = 4.7
Identities = 5/29 (17%), Positives = 11/29 (37%)
Query: 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKK 128
F + + G G GK+ + + +
Sbjct: 45 FFLFLHGRAGSGKSVIASQALSKSDQLIG 73
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 25.8 bits (55), Expect = 5.0
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
+ +++VG GVGK+ +
Sbjct: 5 ETHKLVVVGGGGVGKSALTIQFIQ 28
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 26.2 bits (56), Expect = 5.1
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQL 146
VI I G +G GK T +A + LL + +R A L
Sbjct: 5 VITIDGPSGAGKGTLCKAMAEAL----QWHLLDSGAIYRVLALAAL 46
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 26.1 bits (56), Expect = 5.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFK 124
K +++G G GK T KLA F
Sbjct: 2 KGVRAVLLGPPGAGKGTQAPKLAKNFC 28
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 25.9 bits (55), Expect = 5.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKR 126
I +VG G GK+T +LA
Sbjct: 5 IFLVGPMGAGKSTIGRQLAQQLNME 29
>d1ryoa_ c.94.1.2 (A:) Transferrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 324
Score = 26.2 bits (57), Expect = 5.2
Identities = 9/44 (20%), Positives = 16/44 (36%)
Query: 149 LGKYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGR 192
L N PV++E + F KK++ + G+
Sbjct: 69 LAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKKDSGFQMNQLRGK 112
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 26.2 bits (56), Expect = 5.8
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 86 KSLEKPLIFKKCKPFVIMIVGVNGVGKTTTI 116
KS + I+G NG GK+ +
Sbjct: 12 KSYRGVTKVGFGESNFTSIIGPNGSGKSNMM 42
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 25.8 bits (56), Expect = 5.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 101 VIMIVGVNGVGKTTTI 116
I+G +G GKTT +
Sbjct: 33 RFGILGPSGAGKTTFM 48
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 25.7 bits (55), Expect = 5.9
Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISEK 161
++IVG VGK+T L N ++++ T R E+++I G + +
Sbjct: 3 MVIVGKPNVGKST----LLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGV 58
Query: 162 KITDPAAIAFNAINIAQK--KNTDIVIV 187
+ + I + + DIV+
Sbjct: 59 RSETNDLVERLGIERTLQEIEKADIVLF 86
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 25.8 bits (55), Expect = 6.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 100 FVIMIVGVNGVGKTTTIGKLAN 121
F +++VG G GKTT + +
Sbjct: 4 FKLVLVGDGGTGKTTFVKRHLT 25
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 25.7 bits (55), Expect = 6.2
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFKKR 126
I +VG G G TT +LA
Sbjct: 5 IFMVGARGCGMTTVGRELARALGYE 29
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 25.7 bits (55), Expect = 6.4
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Query: 89 EKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLAN 121
L+ K ++VG VGKT + AN
Sbjct: 5 PGALMLK------CVVVGDGAVGKTCLLMSYAN 31
>d2qalf1 d.58.14.1 (F:1-100) Ribosomal protein S6 {Escherichia coli
[TaxId: 562]}
Length = 100
Score = 24.7 bits (54), Expect = 6.6
Identities = 11/72 (15%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 219 YEIFLIIDGNTGQNTLSQIKEFSKILRITGLIITKLDGTTKGGILAAIAKK---YSIPLY 275
YEI ++ + + I+ ++ + I +L+ + + I K + + +
Sbjct: 4 YEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMN 63
Query: 276 FIGIGEKIEDLQ 287
E I++L+
Sbjct: 64 VEAPQEVIDELE 75
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 318
Score = 25.8 bits (55), Expect = 6.7
Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 6/108 (5%)
Query: 102 IMIVGVNGVGKTTTI-GKLANYFKKRKKSVLLAACDTF-RAAAYEQLLILGKYNDVPVIS 159
++I+ G GKT + ++A ++ + TF AA E +
Sbjct: 27 LLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAED 86
Query: 160 EKKITDPAAIAFNAINIAQKK---NTDIVIVDTSGRLSTQSHLMRELK 204
T ++ + + N + I+D + +LS +++E
Sbjct: 87 VWIST-FHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKN 133
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 25.6 bits (55), Expect = 6.7
Identities = 6/32 (18%), Positives = 15/32 (46%)
Query: 94 FKKCKPFVIMIVGVNGVGKTTTIGKLANYFKK 125
+ + I + G++ GK+T +L + +
Sbjct: 19 LRNQRGLTIWLTGLSASGKSTLAVELEHQLVR 50
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 25.7 bits (55), Expect = 6.7
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 4/36 (11%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLA 133
P +I I G G GK+T +A + VL
Sbjct: 2 HPIIIGITGNIGSGKST----VAALLRSWGYPVLDL 33
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase
{Lactobacillus casei [TaxId: 1582]}
Length = 296
Score = 25.8 bits (55), Expect = 6.8
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
Query: 83 NLLKSLEKPLIFKKCKPFVIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
LL +L P + I + G N GK + +A+ + +V L
Sbjct: 27 TLLHALGNPQQ----QGRYIHVTGTN--GKGSAANAIAHVLEASGLTVGL 70
>d1ce2a1 c.94.1.2 (A:1-333) Lactoferrin {Domestic water buffalo
(Bubalus arnee bubalis) [TaxId: 89462]}
Length = 333
Score = 25.8 bits (56), Expect = 7.2
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 151 KYNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGR 192
Y PV +E T + KK ++ + GR
Sbjct: 71 PYKLRPVAAEIYGTKESPQTHYYAVAVVKKGSNFQLDQLQGR 112
>d1ieja_ c.94.1.2 (A:) Ovotransferrin {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 329
Score = 25.8 bits (56), Expect = 7.2
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 144 EQLLILGK--YNDVPVISEKKITDPAAIAFNAINIAQKKNTDIVIVDTSGR 192
Q+ G Y P+ +E + KK T+ + D G+
Sbjct: 59 GQVFEAGLAPYKLKPIAAEVYEHTEGSTTSYYAVAVVKKGTEFTVNDLQGK 109
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 25.3 bits (54), Expect = 7.4
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
+ + ++++G GVGK+ +
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVT 25
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 25.4 bits (54), Expect = 7.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 102 IMIVGVNGVGKTTTIGKLAN 121
I+ G + VGK+T I +L
Sbjct: 3 IIFAGRSNVGKSTLIYRLTG 22
>d2ooka1 c.13.2.2 (A:2-126) Hypothetical protein Sfri0576
{Shewanella frigidimarina [TaxId: 56812]}
Length = 125
Score = 24.8 bits (54), Expect = 7.5
Identities = 7/42 (16%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 173 AINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKI 214
+I I + ++ V + G L+ + + I ++E +
Sbjct: 8 SIGINRIESVFFVTLKAIGTLTHE-----DYLVITPMLEGAL 44
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 25.4 bits (54), Expect = 8.0
Identities = 16/163 (9%), Positives = 42/163 (25%), Gaps = 2/163 (1%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLLAACDTFRAAAYEQLLILGKYNDVPVISE 160
V GV G GKT + + + + + A + + +
Sbjct: 36 VTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERI 95
Query: 161 KKITDPAAIAFNAINIAQKKNTDIVIVDTSGRLSTQSHLMRELKKIKKVIEKKIFELPYE 220
++ + A I + L++E IK V+ +
Sbjct: 96 MQMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFRN 155
Query: 221 IFLIIDGNTGQNTL--SQIKEFSKILRITGLIITKLDGTTKGG 261
+ + + +K+ + ++ + +
Sbjct: 156 EYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTNQVSAKP 198
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 25.3 bits (54), Expect = 8.1
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
+ + ++++G GVGK+ +
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQ 25
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 25.4 bits (54), Expect = 8.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
+ F I+++G + VGKT +
Sbjct: 1 RIFKIIVIGDSNVGKTCLTYRFCA 24
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 25.0 bits (53), Expect = 8.3
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 195 TQSHLMRELKKIKKVIEKKIFELPYEI 221
+ + + L ++ E I ELP EI
Sbjct: 132 SDENDAKILNDVQDRFEVNISELPDEI 158
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 25.4 bits (55), Expect = 8.3
Identities = 4/16 (25%), Positives = 9/16 (56%)
Query: 101 VIMIVGVNGVGKTTTI 116
+++G G GK+ +
Sbjct: 26 YCVLLGPTGAGKSVFL 41
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 25.1 bits (53), Expect = 8.4
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 100 FVIMIVGVNGVGKTTTIGKLANYFKKRKKSV 130
+ ++++G GVGK+T LAN F S+
Sbjct: 4 YRVVLIGEQGVGKST----LANIFAGVHDSM 30
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 25.1 bits (53), Expect = 8.4
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 102 IMIVGVNGVGKTTTIGKLAN 121
+++VG VGK++ I +
Sbjct: 5 MVVVGNGAVGKSSMIQRYCK 24
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 25.6 bits (56), Expect = 8.4
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 101 VIMIVGVNGVGKTTTIGKLANYFKKRKKSVLL 132
++ I G G GKT+ + + + + +
Sbjct: 64 MLAITGSTGSGKTSLLMLILGELEASEGIIKH 95
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 25.3 bits (54), Expect = 8.6
Identities = 8/18 (44%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Query: 102 IMIVGVNGVGKTTTIGKL 119
++VG+ G GK +TIG+
Sbjct: 4 AVLVGLPGSGK-STIGRR 20
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 25.3 bits (54), Expect = 8.8
Identities = 5/22 (22%), Positives = 11/22 (50%)
Query: 100 FVIMIVGVNGVGKTTTIGKLAN 121
F +++G G GK+ + +
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIE 27
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 25.3 bits (54), Expect = 8.8
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 102 IMIVGVNGVGKTTTIGKLANYFK 124
++++G G GK T L F
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERFH 27
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 25.1 bits (53), Expect = 9.0
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
K I I+G VGK++ +
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVE 26
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 25.2 bits (54), Expect = 9.1
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 100 FVIMIVGVNGVGKTTTIGKLAN 121
F I+I+G + VGKT+ + + A+
Sbjct: 6 FKILIIGNSSVGKTSFLFRYAD 27
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 25.1 bits (54), Expect = 9.1
Identities = 4/24 (16%), Positives = 12/24 (50%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
++++G GK+T + ++
Sbjct: 5 ATHRLLLLGAGESGKSTIVKQMRI 28
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 25.2 bits (54), Expect = 9.5
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 102 IMIVGVNGVGKTTTIGKLAN 121
++ +G +GVGKTT + + +
Sbjct: 8 LLALGDSGVGKTTFLYRYTD 27
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 25.2 bits (54), Expect = 9.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 100 FVIMIVGVNGVGKTTTIGKLAN 121
F I+++G GVGKT + +
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQ 27
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 24.9 bits (53), Expect = 9.6
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 100 FVIMIVGVNGVGKTTTIGKLAN 121
+++VG GVGK+ +
Sbjct: 5 HKVIMVGSGGVGKSALTLQFMY 26
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 25.2 bits (54), Expect = 9.6
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 100 FVIMIVGVNGVGKTTTIGKLAN 121
I+I+G +GVGK++ + + +
Sbjct: 8 LKILIIGESGVGKSSLLLRFTD 29
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 25.2 bits (55), Expect = 9.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 101 VIMIVGVNGVGKTTTI 116
VI I+G +G GK+T +
Sbjct: 30 VISIIGSSGSGKSTFL 45
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 25.0 bits (53), Expect = 9.7
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 98 KPFVIMIVGVNGVGKTTTIGKLAN 121
+ ++VG VGKT +
Sbjct: 4 QAIKCVVVGDGAVGKTCLLISYTT 27
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 24.8 bits (53), Expect = 9.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 100 FVIMIVGVNGVGKTTTIGKLAN 121
F +M+VG +GVGKT + + +
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKD 28
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 25.0 bits (53), Expect = 9.8
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 100 FVIMIVGVNGVGKTTTIGKLAN 121
++I+G +GVGKT+ + + N
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVN 24
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 24.9 bits (53), Expect = 10.0
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 100 FVIMIVGVNGVGKTTTIGKLAN 121
F ++++G VGKT+ + +
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCE 25
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.376
Gapped
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,092,659
Number of extensions: 52653
Number of successful extensions: 471
Number of sequences better than 10.0: 1
Number of HSP's gapped: 465
Number of HSP's successfully gapped: 225
Length of query: 302
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 217
Effective length of database: 1,240,546
Effective search space: 269198482
Effective search space used: 269198482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.2 bits)