BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2882
(1428 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P04995|EX1_ECOLI Exodeoxyribonuclease I OS=Escherichia coli (strain K12) GN=sbcB
PE=1 SV=2
Length = 475
Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats.
Identities = 167/434 (38%), Positives = 250/434 (57%), Gaps = 13/434 (2%)
Query: 311 STFLWYDYETFGLNVRRDRPFQFAAIRTDIMLNTIDNPIMLYCKPAPDFLPDPRACLITK 370
STFL++DYETFG + DRP QFAAIRTD N I P + YCKPA D+LP P A LIT
Sbjct: 9 STFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 68
Query: 371 ITPQFCLNNGIPEYKFASIIEKIFLKPGTISVGYNTILFDDEITRFMFWRNLINPYEREW 430
ITPQ G E FA+ I +F P T +GYN + FDDE+TR +F+RN +PY W
Sbjct: 69 ITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSW 128
Query: 431 KNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVR 490
+++ SRWDL++V++A Y L P GI WP ++G PSF+LEHL+ N + H AHDA++DV
Sbjct: 129 QHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNAHDAMADVY 188
Query: 491 ATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWP 550
AT+ +A+L++ PRLF+++ + R K ++A I P +P +++ MF + S + P
Sbjct: 189 ATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWRGNTSWVAP 248
Query: 551 ICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKED--IPISMIHLNRSPI 608
+ HP N+N +I +L D L D + +R+ L K ++ +P+ ++H+N+ P
Sbjct: 249 LAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNAAVPVKLVHINKCP- 307
Query: 609 VISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYK----INNSDLEL 664
V++ L R + N+K + N + +K+ + SD
Sbjct: 308 VLAQANTLRPEDADRLGINRQHCLDNLKI---LRENPQVREKVVAIFAEAEPFTPSD--- 361
Query: 665 NIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSY 724
N+D +LYN F S D + I+ P+ L ++ F +K++E+L+F YRARNF TL Y
Sbjct: 362 NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLDY 421
Query: 725 KELKRWKKYRISRF 738
E +RW ++R F
Sbjct: 422 AEQQRWLEHRRQVF 435
>sp|P45188|EX1_HAEIN Exodeoxyribonuclease I OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=sbcB PE=3 SV=1
Length = 473
Score = 324 bits (831), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 245/427 (57%), Gaps = 7/427 (1%)
Query: 312 TFLWYDYETFGLNVRRDRPFQFAAIRTDIMLNTIDNPIMLYCKPAPDFLPDPRACLITKI 371
+F YDYE+FG+N DRP QFA IRTD N I PIM YCK D+LP P A ++T I
Sbjct: 6 SFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAVMVTGI 65
Query: 372 TPQFCLNNGIPEYKFASIIEKIFLKPGTISVGYNTILFDDEITRFMFWRNLINPYEREWK 431
TPQ C G+ E +FA+ I F +P T +GYN I +DDE+TR+ F+RN I PYE WK
Sbjct: 66 TPQECNEKGLSEPEFAANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIEPYEYSWK 125
Query: 432 NNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVRA 491
N SRWDL+++++A Y L P GI W Y ++G PSF+LE L+ N++ H+ AHDA++DV A
Sbjct: 126 NGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANSIEHENAHDAMADVYA 185
Query: 492 TLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPI 551
T+ +A+LI+ P+LF + R KK + + P +++ M + + + P+
Sbjct: 186 TIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCTWVAPL 245
Query: 552 CIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE----DIPISMIHLNRSP 607
HP N+N LI +L D L +++R L KK +E +P+ ++H+N+ P
Sbjct: 246 AWHPTNQNALIVCDLTGDIDNLLAKSADELRADLYTKKLELEERGVSSVPLKLVHINKCP 305
Query: 608 IVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYKINNSDLELNID 667
I ++ K L R D N+ + + IF + + S+ N++
Sbjct: 306 I-LAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASN--DNVE 362
Query: 668 EELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFIETLSYKEL 727
ELYN F S D +AILRS+ +KLS FE+K++ EL+F YRAR+F +TL+ E
Sbjct: 363 TELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHYRARHFYKTLTRAEQ 422
Query: 728 KRWKKYR 734
+WKKYR
Sbjct: 423 IKWKKYR 429
>sp|P57620|EX1_BUCAI Exodeoxyribonuclease I OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=sbcB PE=3 SV=1
Length = 413
Score = 295 bits (756), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/411 (43%), Positives = 242/411 (58%), Gaps = 16/411 (3%)
Query: 313 FLWYDYETFGLNVRRDRPFQFAAIRTDIMLNTIDNPIMLYCKPAPDFLPDPRACLITKIT 372
FL+YDYETFG++ D+P QFA IRTDI LN ID+P YC P+ D+LPDP + LIT IT
Sbjct: 11 FLFYDYETFGIHTALDKPAQFACIRTDINLNIIDDPQYFYCFPSDDYLPDPGSVLITHIT 70
Query: 373 PQFCLNNGIPEYKFASIIEKIFLKPGTISVGYNTILFDDEITRFMFWRNLINPYEREWKN 432
PQ+ NG EY F+ I I ++ T VGYN I FDDEITR +F+RN +PYE WKN
Sbjct: 71 PQYTEKNGTNEYNFSQKIYDILMQSNTCVVGYNNINFDDEITRNIFYRNFFDPYEWSWKN 130
Query: 433 NCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALSDVRAT 492
SRWD++N+++A Y L P GI WP G SFKL L+ NN+ H AH+A+SDV AT
Sbjct: 131 GNSRWDILNLLRACYALRPTGINWPKNELGLTSFKLSDLTKTNNIVHLNAHNAVSDVYAT 190
Query: 493 LGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISLMWPIC 552
+ +A+L++ PRLF+F +RKK + I +P YI+ F + + +S + PI
Sbjct: 191 IEIAKLVKKKQPRLFDFFFKIRKKNELYKLIDLRNFQPIIYISAYFGAIYHNMSCILPIA 250
Query: 553 IHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DIPISMIHLNRSPIV- 609
H N NILI +L D K L+N KI CF K D + ++HLNR PI+
Sbjct: 251 WHENNSNILIAIDLFKDIKT-LINMCKKI----CFDSIFIKNLLDSGVVLLHLNRCPILA 305
Query: 610 -ISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYKINNSDLELNIDE 668
I ++ N + ++F LN + IK + N K IF K NN++ N+D
Sbjct: 306 PIQVIRKEDYNRLNFHRFSLNKKIELIKKNMFFIQNI---KIIF--SKNNNTNQFFNVDL 360
Query: 669 ELYNNFISKKDNLKLAILRSMSPKKLSNVNFC-FENKKLEELIFLYRARNF 718
E+YN F + KD K+ I+R+ P L ++ FC F + +L+ L F YRARNF
Sbjct: 361 EIYNGFFNSKDKKKIQIIRNTDPVFLKHI-FCNFHDSRLKNLFFRYRARNF 410
>sp|Q8K923|EX1_BUCAP Exodeoxyribonuclease I OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=sbcB PE=3 SV=1
Length = 482
Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 179/461 (38%), Positives = 257/461 (55%), Gaps = 21/461 (4%)
Query: 305 LLHNGNSTFLWYDYETFGLNVRRDRPFQFAAIRTDIMLNTIDNPIMLYCKPAPDFLPDPR 364
+L FL+YDYETFG++ D+P QF++IRTD N ++ P YC P+ D+LPDP
Sbjct: 4 ILKKNEVNFLFYDYETFGIHTSLDKPAQFSSIRTDKNFNIMEEPKCFYCFPSDDYLPDPS 63
Query: 365 ACLITKITPQFCLNNGIPEYKFASIIEKIFLKPGTISVGYNTILFDDEITRFMFWRNLIN 424
+ LIT ITP++ +G EYKF+ I + LKP T +GYN I FDDEITR +F+RN ++
Sbjct: 64 SILITGITPEYTEKHGFNEYKFSKKIHDVLLKPNTCIIGYNNINFDDEITRNIFYRNFLD 123
Query: 425 PYEREWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHD 484
PYE WKNN SRWDL+NV++A Y L P GI WP G P FKL L+ NN+SH AHD
Sbjct: 124 PYEWSWKNNNSRWDLLNVVRACYALRPSGIQWPKNEFGLPVFKLSDLTQKNNISHYNAHD 183
Query: 485 ALSDVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSY 544
A SDV AT+ LA+LI+ P+LF+F RKK + I P Y++ F +
Sbjct: 184 ATSDVYATIELAKLIKRKQPKLFDFFFKYRKKNELCRLIDIEKFTPIIYVSSYFGALRQN 243
Query: 545 ISLMWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNSFKE--DIPISMIH 602
+S + P+ NKNILI+ +L D K ++ + S K+ D+ I +++
Sbjct: 244 MSCILPLSWDLHNKNILISIDLFKDIDKLIV-----FCKTVSISNISIKDLFDLGIVLVY 298
Query: 603 LNRSPIVISNLKVLSSNLMFRYKFDLNCAFKNIKCASSILNNTYIWKKIFLDYKINNSDL 662
LNR PI ++ +KV+ R F +K I + K + L K N +
Sbjct: 299 LNRCPI-LAPIKVIRKEDTNRLNFKKYFYYKKINLVKKNYFLIDLVKNVLL--KKNENKN 355
Query: 663 ELNIDEELYNNFISKKD-NL--KLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARNFI 719
LN+D ++Y++F + D NL K+++ +S KK+ F++ +L+EL F Y+ARNF
Sbjct: 356 SLNVDLQIYDSFFNFHDKNLIKKISLTKSSDLKKMK---LDFKDPRLKELFFRYKARNFF 412
Query: 720 ETLSYKELKRWKKYRISRFYNKKNNLYNINMFYLEIESLLK 760
L E K W Y + K N + + + +IESLLK
Sbjct: 413 NILKNDEKKEWINYCL-----KTLNSFFLTGYIDKIESLLK 448
>sp|Q89A43|EX1_BUCBP Exodeoxyribonuclease I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=sbcB PE=3 SV=1
Length = 481
Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 239/433 (55%), Gaps = 25/433 (5%)
Query: 308 NGNSTFLWYDYETFGLNVRRDRPFQFAAIRTDIMLNTIDNPIMLYCKPAPDFLPDPRACL 367
N + TFL+YDYETFG N D+P QF+ I+TDI N I + ++C P+ D+LPDP + L
Sbjct: 6 NTSLTFLFYDYETFGKNPALDKPSQFSCIQTDIDFNIIGSIQEIFCYPSVDYLPDPESVL 65
Query: 368 ITKITPQFCLNNGIPEYKFASIIEKIFLKPGTISVGYNTILFDDEITRFMFWRNLINPYE 427
IT I+P++ G+ E++FA I +F+K T +GYN I FDDE TR +F+RN +N YE
Sbjct: 66 ITGISPKYTSLFGVNEFEFAKKIYSLFMKSDTCIIGYNNIYFDDEFTRNIFYRNFLNSYE 125
Query: 428 REWKNNCSRWDLINVIKAFYVLSPYGITWPYKNNGKPSFKLEHLSFVNNLSHKKAHDALS 487
WKN SRWD++++++A YVL P GI WP + S +L +S NN+ H AH+A S
Sbjct: 126 WSWKNGNSRWDMLDLLRACYVLRPEGINWPRNEDNSVSLRLSDISLANNIVHNVAHNASS 185
Query: 488 DVRATLGLARLIRNNNPRLFNFILSLRKKKYVLAEIGWPIARPFFYITHMFSSKHSYISL 547
DV AT+ +A+LI+ P+LFNF R KK +L I P YI+ F + YIS
Sbjct: 186 DVYATMNIAKLIKQKKPKLFNFFFKYRTKKAILTLIDVNSLNPIVYISRFFGVVNRYISY 245
Query: 548 MWPICIHPMNKNILITWNLLHDPKKFLLNDINKIRDYLCFKKNS-----FKED--IPISM 600
+ PI HP+N NIL++ +L D +K +LN FK+NS +KE + I
Sbjct: 246 IVPILWHPINSNILVSIDLSQDVQK-ILN---------FFKRNSILNVNYKEIFLMGIRF 295
Query: 601 IHLNRSPIVI-SNLKVLSSNLMFR--YKFDLNCAFKNIKCASSILNNTYIWKKIFLDYKI 657
I++NR PI+I +N+ + + R YK N K I K
Sbjct: 296 IYVNRCPILIPTNVIRMKDRIRLRINYKLFQNNLVLLRKNIFLKKKLKKFLCSIAEAPKY 355
Query: 658 NNSDLELNIDEELYNNFISKKDNLKLAILRSMSPKKLSNVNFCFENKKLEELIFLYRARN 717
N S N+D ++YN+F S DN + + S PK++ +NF + ++ +L L+ AR
Sbjct: 356 NGS----NVDLKMYNSFFSYIDNNVIKNIHSTLPKRIK-INFMKYDNRINQLFILFLARY 410
Query: 718 FIETLSYKELKRW 730
+ L Y E W
Sbjct: 411 RPDMLDYSEKYFW 423
>sp|P00582|DPO1_ECOLI DNA polymerase I OS=Escherichia coli (strain K12) GN=polA PE=1 SV=1
Length = 928
Score = 220 bits (561), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/280 (43%), Positives = 168/280 (60%), Gaps = 20/280 (7%)
Query: 779 IDGSSCIYRAFYALPDIRNIDNFPVGALYGTIKMLRKLYKNYRATYIACIFDAKGKNFRN 838
+DGSS +YRA++A P + N P GA+YG + MLR L Y+ T+ A +FDAKGK FR+
Sbjct: 12 VDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRD 71
Query: 839 ILYPSYKATRKKMPYNLILQINLIHQMVKAIGWPILIIKGVEADDVIGTLAKQAVTKHNL 898
L+ YK+ R MP +L QI +H MVKA+G P+L + GVEADDVIGTLA++A K
Sbjct: 72 ELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA-EKAGR 130
Query: 899 KVIISTNDKDMAQLVSNKIALIN--NNKIHDRTTIISRFGVSPEKIVDYFSLIGDMSDNL 956
V+IST DKDMAQLV+ I LIN N I +++++GV PE I+D+ +L+GD SDN+
Sbjct: 131 PVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDNI 190
Query: 957 PGVKKIGPKTAVKLLNQYNSLENIINNANNIKGVIGKNLRFALNWLPKLK---------- 1006
PGV +G KTA LL L+ + I G+ + R A KL+
Sbjct: 191 PGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGL---SFRGAKTMAAKLEQNKEVAYLSY 247
Query: 1007 KILTIKTDCDLTKNIVSIPESLILQPKDEKLLMQLFNKYN 1046
++ TIKTD +L ++ + + QP E+LL LF KY
Sbjct: 248 QLATIKTDVELE---LTCEQLEVQQPAAEELL-GLFKKYE 283
>sp|P43741|DPO1_HAEIN DNA polymerase I OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=polA PE=3 SV=1
Length = 930
Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 171/277 (61%), Gaps = 14/277 (5%)
Query: 779 IDGSSCIYRAFYALPDIRNIDNFPVGALYGTIKMLRKLYKNYRATYIACIFDAKGKNFRN 838
+DGSS +YRAF+A P + N P A+YG + ML+ L + T+IA +FDAKGK FR+
Sbjct: 12 VDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLISQVQPTHIAVVFDAKGKTFRD 71
Query: 839 ILYPSYKATRKKMPYNLILQINLIHQMVKAIGWPILIIKGVEADDVIGTLAKQAVTKHNL 898
++ YK+ R MP +L QI +H M++A+G P+L+++G+EADDVIGTLA QA +
Sbjct: 72 EMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGIEADDVIGTLALQA-SSLGK 130
Query: 899 KVIISTNDKDMAQLVSNKIALIN--NNKIHDRTTIISRFGVSPEKIVDYFSLIGDMSDNL 956
KV+IST DKDMAQLV + I LIN NN + DR +I ++G+ PE I+DY +L+GD +DN+
Sbjct: 131 KVLISTGDKDMAQLVDDNIMLINTMNNSLLDRKGVIEKYGIPPELIIDYLALMGDSADNI 190
Query: 957 PGVKKIGPKTAVKLLNQYNSLENIINNANN-----IKGV--IGKNLRFALNWLPKLKKIL 1009
PGV +G KTA+ LL S+ I N I+G +G+ L N +
Sbjct: 191 PGVAGVGEKTALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEKNNADLSYTLA 250
Query: 1010 TIKTDCDLTKNIVSIPESLILQPKDEKLLMQLFNKYN 1046
TIKTD +L N+ + + L+L + L++ F +Y
Sbjct: 251 TIKTDVEL--NVTT--DQLLLGESQKDQLIEYFARYE 283
>sp|Q9F173|DPO1_SALTY DNA polymerase I OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=polA PE=3 SV=2
Length = 928
Score = 217 bits (553), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/277 (43%), Positives = 167/277 (60%), Gaps = 14/277 (5%)
Query: 779 IDGSSCIYRAFYALPDIRNIDNFPVGALYGTIKMLRKLYKNYRATYIACIFDAKGKNFRN 838
+DGSS +YRA++A P + N P GA+YG + MLR L Y+ T+ A +FDAKGK FR+
Sbjct: 12 VDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAVVFDAKGKTFRD 71
Query: 839 ILYPSYKATRKKMPYNLILQINLIHQMVKAIGWPILIIKGVEADDVIGTLAKQAVTKHNL 898
L+ YK+ R MP +L QI +H MVKA+G P+L + GVEADDVIGTLA++A K
Sbjct: 72 ELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA-EKVGR 130
Query: 899 KVIISTNDKDMAQLVSNKIALIN--NNKIHDRTTIISRFGVSPEKIVDYFSLIGDMSDNL 956
V+IST DKDMAQLV+ I LIN N I +++++GV PE I+D+ +L+GD SDN+
Sbjct: 131 PVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFLALMGDSSDNI 190
Query: 957 PGVKKIGPKTAVKLLNQYNSLENIINNANNIKGVIGKNLRFALNWLPKLK-------KIL 1009
PGV +G KTA LL L+ + I G+ + + L + K K+
Sbjct: 191 PGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNKDVAYLSYKLA 250
Query: 1010 TIKTDCDLTKNIVSIPESLILQPKDEKLLMQLFNKYN 1046
TIKTD +L ++ + + QP ++LL LF KY
Sbjct: 251 TIKTDVELE---LTCEQLEVQQPIADELL-GLFKKYE 283
>sp|Q8Y1L5|Y675_RALSO UPF0301 protein RSc0675 OS=Ralstonia solanacearum (strain GMI1000)
GN=RSc0675 PE=3 SV=1
Length = 190
Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats.
Identities = 90/188 (47%), Positives = 129/188 (68%), Gaps = 13/188 (6%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMPG + P F G VVYLCEHN GA G++IN+P D+ + L D +LKL++
Sbjct: 9 NLTNQFLIAMPGMADPTFSGTVVYLCEHNERGALGLVINRPIDIDLATLFDK-IDLKLEI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P ++ + +GGP+Q +RGFVLH+ ++S+L + + +TTS+D+L
Sbjct: 68 HPLAEQ--------PVYYGGPVQTERGFVLHDAMGS----YSSSLTVPGGLEMTTSKDVL 115
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ +RG GP + +++LG +GW AGQLEEEI N WL V A+ E+IFNVP E+RF AA++L
Sbjct: 116 EAVARGGGPQRFILTLGYAGWSAGQLEEEIGRNGWLTVQADPEIIFNVPAEERFAAALRL 175
Query: 1253 LGVNPLII 1260
LG+NP ++
Sbjct: 176 LGINPAML 183
>sp|B2U7A8|Y619_RALPJ UPF0301 protein Rpic_0619 OS=Ralstonia pickettii (strain 12J)
GN=Rpic_0619 PE=3 SV=1
Length = 190
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 131/191 (68%), Gaps = 13/191 (6%)
Query: 1070 SLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLK 1129
+L NLTN FLIAMPG + F G VVY+CEHN GA G++IN+P D+ + L D +LK
Sbjct: 6 ALINLTNQFLIAMPGMADSTFSGTVVYMCEHNERGALGLVINRPIDIDLATLFDK-IDLK 64
Query: 1130 LKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSR 1189
L++ P ++ ++ +GGP+Q +RGFVLH+ T ++S+L + + +TTS+
Sbjct: 65 LEIHPLAEQ--------SVYYGGPVQTERGFVLHDATGA----YSSSLAVPGGLEMTTSK 112
Query: 1190 DILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAA 1249
D+LE+ ++G GP + +++LG +GW AGQLE+EI N WL V A+ E+IFNVP E+RF AA
Sbjct: 113 DVLEAVAQGGGPHRFILTLGYAGWSAGQLEDEISRNGWLTVQADPEIIFNVPPEERFAAA 172
Query: 1250 VKLLGVNPLII 1260
+ LLG+NP ++
Sbjct: 173 LNLLGINPAML 183
>sp|Q474U6|Y705_CUPPJ UPF0301 protein Reut_A0705 OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=Reut_A0705 PE=3 SV=2
Length = 190
Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 130/191 (68%), Gaps = 13/191 (6%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
+ +++ NLTN FLIAMPG + P F G+VVYLCEHN GA G++IN+P D+ + L D
Sbjct: 2 AKSEAPINLTNQFLIAMPGMADPTFSGSVVYLCEHNERGALGLVINRPIDIDMATLFDK- 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P + + FGGP+Q +RGFVLH+ I+ S+L + + +
Sbjct: 61 IDLKLEIQPVAHQ--------PVYFGGPVQTERGFVLHDPVG----IYVSSLAVPGGLEM 108
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG SGWGAGQLE+E+ N WL V A+ E+IF+VP E+R
Sbjct: 109 TTSKDVLEAVANGSGPHRFLLTLGYSGWGAGQLEDELSRNGWLTVQADPEIIFSVPPEER 168
Query: 1246 FFAAVKLLGVN 1256
F AA++LLG++
Sbjct: 169 FSAAIRLLGID 179
>sp|Q1LJR0|Y2743_RALME UPF0301 protein Rmet_2743 OS=Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839) GN=Rmet_2743 PE=3 SV=2
Length = 190
Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 130/191 (68%), Gaps = 13/191 (6%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
+ +++ NLTN FLIAMPG + P F G+VVYLCEHN GA G++IN+P D+ + L D
Sbjct: 2 ATSEAPINLTNQFLIAMPGMADPTFSGSVVYLCEHNERGALGLVINRPIDIDMATLFDK- 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P + + FGGP+Q +RGFVLH+ I+ S+L + + +
Sbjct: 61 IDLKLEIQPVAHQ--------PVYFGGPVQTERGFVLHDPVG----IYVSSLAVPGGLEM 108
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLE+E+ N WL V A+ E+IF+VP E+R
Sbjct: 109 TTSKDVLEAVANGSGPHRFLLTLGYAGWGAGQLEDELSRNGWLTVQADPEIIFSVPPEER 168
Query: 1246 FFAAVKLLGVN 1256
F AA++LLG++
Sbjct: 169 FAAAIRLLGID 179
>sp|Q9HT80|DPO1_PSEAE DNA polymerase I OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1
/ 1C / PRS 101 / LMG 12228) GN=polA PE=3 SV=1
Length = 913
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 150/258 (58%), Gaps = 21/258 (8%)
Query: 779 IDGSSCIYRAFYALPDIRNIDNFPVGALYGTIKMLRKLYKNYRATYIACIFDAKGKNFRN 838
+DGSS +YRAF+ALP + P GA+ G + ML L K Y + A +FDAKG FR+
Sbjct: 9 VDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFDAKGPTFRD 68
Query: 839 ILYPSYKATRKKMPYNLILQINLIHQMVKAIGWPILIIKGVEADDVIGTLAKQAVTKHNL 898
L+ YKA R MP +L +Q+ +H V+A+G P+L ++GVEADDVIGTLA+ + +
Sbjct: 69 ELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLARSSAAA-DR 127
Query: 899 KVIISTNDKDMAQLVSNKIALIN--NNKIHDRTTIISRFGVSPEKIVDYFSLIGDMSDNL 956
V+IST DKDMAQLV I L+N D + +FGV PE I+D+ +L+GD DN+
Sbjct: 128 PVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALMGDKVDNI 187
Query: 957 PGVKKIGPKTAVKLLNQ--------YNSLENI----INNANNIKGVIGKNLRFA-LNWLP 1003
PGV +G KTA+ LL Y SL+ + I A + + +N A L++
Sbjct: 188 PGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQAFLSY-- 245
Query: 1004 KLKKILTIKTDCDLTKNI 1021
++ TIKTD +L I
Sbjct: 246 ---QLATIKTDVELDVEI 260
>sp|O67550|EX53_AQUAE 5'-3' exonuclease OS=Aquifex aeolicus (strain VF5) GN=aq_1628 PE=3
SV=1
Length = 289
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 134/207 (64%), Gaps = 3/207 (1%)
Query: 779 IDGSSCIYRAFYALPDIRNIDNFPVGALYGTIKMLRKLYKNYRATYIACIFDAKGKNFRN 838
+DGSS +YR+F+ALP + FP A+YG ++ML L K R Y+ +FDA K R
Sbjct: 7 LDGSSFVYRSFFALPPLSTSKGFPTNAIYGFLRMLFSLIKKERPQYLVVVFDAPAKTKRE 66
Query: 839 ILYPSYKATRKKMPYNLILQINLIHQMVKAIGWPILIIKGVEADDVIGTLAKQAVTKHNL 898
+Y YK R K P L +QI +I +++K G P+L + G EADDVI LA++ ++
Sbjct: 67 KIYADYKKQRPKAPDPLKVQIPVIKEILKLAGIPLLELPGYEADDVIAYLAEK-FSQKGF 125
Query: 899 KVIISTNDKDMAQLVSNKIALIN--NNKIHDRTTIISRFGVSPEKIVDYFSLIGDMSDNL 956
KV I + DKD+ QLVS + +IN N+++ + +I +FGV P+KI DY +L+GD DN+
Sbjct: 126 KVKIYSPDKDLLQLVSENVLVINPMNDEVFTKERVIKKFGVEPQKIPDYLALVGDKVDNV 185
Query: 957 PGVKKIGPKTAVKLLNQYNSLENIINN 983
PG++ +GPKTA+ +L +Y S+ENI+ N
Sbjct: 186 PGIEGVGPKTAINILKKYGSVENILKN 212
>sp|Q2SYJ1|Y1462_BURTA UPF0301 protein BTH_I1462 OS=Burkholderia thailandensis (strain E264
/ ATCC 700388 / DSM 13276 / CIP 106301) GN=BTH_I1462 PE=3
SV=2
Length = 192
Score = 181 bits (458), Expect = 6e-44, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 125/191 (65%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N
Sbjct: 2 SKSSDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NR 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH S +NS++ + + +
Sbjct: 61 IDLKLEIEP-----LLHIP---VYFGGPVQTERGFVLHEPVEGSS--YNSSMTVEGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+R
Sbjct: 111 TTSKDVLEAVATGTGPKRFLLTLGHAGWGAGQLEEEISKNGWLTVAADPRIVFDTPAEER 170
Query: 1246 FFAAVKLLGVN 1256
F AA+ LLGV+
Sbjct: 171 FEAALGLLGVS 181
>sp|B2JFD4|Y2327_BURP8 UPF0301 protein Bphy_2327 OS=Burkholderia phymatum (strain DSM 17167
/ STM815) GN=Bphy_2327 PE=3 SV=1
Length = 191
Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats.
Identities = 84/184 (45%), Positives = 125/184 (67%), Gaps = 12/184 (6%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL++
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLQALF-NRIDLKLEI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH+ + + S++ + + +TTS+D+L
Sbjct: 68 EP-----LLHVP---VYFGGPVQTERGFVLHDASENT---YTSSMQVPGGLEMTTSKDVL 116
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLE+EI N WL V+A+ +++F+VP E RF AA+ L
Sbjct: 117 EAVASGKGPERFLLTLGHAGWGAGQLEDEISKNGWLTVEADPKIVFDVPAENRFEAALAL 176
Query: 1253 LGVN 1256
LG++
Sbjct: 177 LGIS 180
>sp|B2T0I4|Y868_BURPP UPF0301 protein Bphyt_0868 OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=Bphyt_0868 PE=3 SV=1
Length = 192
Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 128/191 (67%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L
Sbjct: 2 SKSTDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLQALFSR- 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH+ + + + S++++ + +
Sbjct: 61 IDLKLEIEP-----LLHVP---VYFGGPVQTERGFVLHDPKDGNA--YTSSMSVPGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V+A+ +++F+VP E+R
Sbjct: 111 TTSKDVLEAVASGTGPERFLLTLGHAGWGAGQLEEEISKNGWLTVEADPKIVFDVPAEER 170
Query: 1246 FFAAVKLLGVN 1256
AA+ LLG+N
Sbjct: 171 LEAALALLGIN 181
>sp|Q144Q2|Y0649_BURXL UPF0301 protein Bxeno_A0649 OS=Burkholderia xenovorans (strain LB400)
GN=Bxeno_A0649 PE=3 SV=2
Length = 192
Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 128/191 (67%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L
Sbjct: 2 SKSTDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLQALFSR- 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH+ + + + S++++ + +
Sbjct: 61 IDLKLEIEP-----LLHVP---VYFGGPVQTERGFVLHDPKDGNA--YTSSMSVPGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V+A+ +++F+VP E+R
Sbjct: 111 TTSKDVLEAVASGTGPERFLLTLGHAGWGAGQLEEEISKNGWLTVEADPKIVFDVPAEER 170
Query: 1246 FFAAVKLLGVN 1256
AA+ LLG+N
Sbjct: 171 LEAALALLGIN 181
>sp|A2S9S9|Y5046_BURM9 UPF0301 protein BMA10229_A2746 OS=Burkholderia mallei (strain NCTC
10229) GN=BMA10229_A2746 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 125/191 (65%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N
Sbjct: 2 SKSSDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NR 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH + +NS++ + + +
Sbjct: 61 IDLKLEIEP-----LLHIP---VYFGGPVQTERGFVLHEPVEGSA--YNSSMTVEGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+R
Sbjct: 111 TTSKDVLEAVATGTGPKRFLLTLGHAGWGAGQLEEEISKNGWLTVAADPRIVFDTPAEER 170
Query: 1246 FFAAVKLLGVN 1256
F AA+ LLGV+
Sbjct: 171 FEAALGLLGVS 181
>sp|A3MMB0|Y4359_BURM7 UPF0301 protein BMA10247_1859 OS=Burkholderia mallei (strain NCTC
10247) GN=BMA10247_1859 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 125/191 (65%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N
Sbjct: 2 SKSSDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NR 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH + +NS++ + + +
Sbjct: 61 IDLKLEIEP-----LLHIP---VYFGGPVQTERGFVLHEPVEGSA--YNSSMTVEGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+R
Sbjct: 111 TTSKDVLEAVATGTGPKRFLLTLGHAGWGAGQLEEEISKNGWLTVAADPRIVFDTPAEER 170
Query: 1246 FFAAVKLLGVN 1256
F AA+ LLGV+
Sbjct: 171 FEAALGLLGVS 181
>sp|Q3JPG1|Y3170_BURP1 UPF0301 protein BURPS1710b_3170 OS=Burkholderia pseudomallei (strain
1710b) GN=BURPS1710b_3170 PE=3 SV=2
Length = 192
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 125/191 (65%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N
Sbjct: 2 SKSSDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NR 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH + +NS++ + + +
Sbjct: 61 IDLKLEIEP-----LLHIP---VYFGGPVQTERGFVLHEPVEGSA--YNSSMTVEGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+R
Sbjct: 111 TTSKDVLEAVATGTGPKRFLLTLGHAGWGAGQLEEEISKNGWLTVAADPRIVFDTPAEER 170
Query: 1246 FFAAVKLLGVN 1256
F AA+ LLGV+
Sbjct: 171 FEAALGLLGVS 181
>sp|A3NYG5|Y3148_BURP0 UPF0301 protein BURPS1106A_3148 OS=Burkholderia pseudomallei (strain
1106a) GN=BURPS1106A_3148 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 125/191 (65%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N
Sbjct: 2 SKSSDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NR 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH + +NS++ + + +
Sbjct: 61 IDLKLEIEP-----LLHIP---VYFGGPVQTERGFVLHEPVEGSA--YNSSMTVEGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+R
Sbjct: 111 TTSKDVLEAVATGTGPKRFLLTLGHAGWGAGQLEEEISKNGWLTVAADPRIVFDTPAEER 170
Query: 1246 FFAAVKLLGVN 1256
F AA+ LLGV+
Sbjct: 171 FEAALGLLGVS 181
>sp|A3NCQ3|Y3112_BURP6 UPF0301 protein BURPS668_3112 OS=Burkholderia pseudomallei (strain
668) GN=BURPS668_3112 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 125/191 (65%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N
Sbjct: 2 SKSSDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NR 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH + +NS++ + + +
Sbjct: 61 IDLKLEIEP-----LLHIP---VYFGGPVQTERGFVLHEPVEGSA--YNSSMTVEGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+R
Sbjct: 111 TTSKDVLEAVATGTGPKRFLLTLGHAGWGAGQLEEEISKNGWLTVAADPRIVFDTPAEER 170
Query: 1246 FFAAVKLLGVN 1256
F AA+ LLGV+
Sbjct: 171 FEAALGLLGVS 181
>sp|A1V203|Y2716_BURMS UPF0301 protein BMASAVP1_A0916 OS=Burkholderia mallei (strain SAVP1)
GN=BMASAVP1_A0916 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 125/191 (65%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N
Sbjct: 2 SKSSDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NR 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH + +NS++ + + +
Sbjct: 61 IDLKLEIEP-----LLHIP---VYFGGPVQTERGFVLHEPVEGSA--YNSSMTVEGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+R
Sbjct: 111 TTSKDVLEAVATGTGPKRFLLTLGHAGWGAGQLEEEISKNGWLTVAADPRIVFDTPAEER 170
Query: 1246 FFAAVKLLGVN 1256
F AA+ LLGV+
Sbjct: 171 FEAALGLLGVS 181
>sp|Q63RH9|Y2693_BURPS UPF0301 protein BPSL2693 OS=Burkholderia pseudomallei (strain K96243)
GN=BPSL2693 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 125/191 (65%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N
Sbjct: 2 SKSSDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NR 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH + +NS++ + + +
Sbjct: 61 IDLKLEIEP-----LLHIP---VYFGGPVQTERGFVLHEPVEGSA--YNSSMTVEGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+R
Sbjct: 111 TTSKDVLEAVATGTGPKRFLLTLGHAGWGAGQLEEEISKNGWLTVAADPRIVFDTPAEER 170
Query: 1246 FFAAVKLLGVN 1256
F AA+ LLGV+
Sbjct: 171 FEAALGLLGVS 181
>sp|Q62I86|Y1997_BURMA UPF0301 protein BMA1997 OS=Burkholderia mallei (strain ATCC 23344)
GN=BMA1997 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 125/191 (65%), Gaps = 11/191 (5%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
S + NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N
Sbjct: 2 SKSSDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NR 60
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+LKL++ P +L + FGGP+Q +RGFVLH + +NS++ + + +
Sbjct: 61 IDLKLEIEP-----LLHIP---VYFGGPVQTERGFVLHEPVEGSA--YNSSMTVEGGLEM 110
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTS+D+LE+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+R
Sbjct: 111 TTSKDVLEAVATGTGPKRFLLTLGHAGWGAGQLEEEISKNGWLTVAADPRIVFDTPAEER 170
Query: 1246 FFAAVKLLGVN 1256
F AA+ LLGV+
Sbjct: 171 FEAALGLLGVS 181
>sp|Q39J05|Y3962_BURS3 UPF0301 protein Bcep18194_A3962 OS=Burkholderia sp. (strain 383)
GN=Bcep18194_A3962 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/184 (47%), Positives = 123/184 (66%), Gaps = 11/184 (5%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL +
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NRIDLKLDI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH S +NS++++ + +TTS+D+L
Sbjct: 68 EP-----LLHIP---VYFGGPVQTERGFVLHEPVEGAS--YNSSMSVEGGLEMTTSKDVL 117
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+RF AA+ L
Sbjct: 118 EAVATGTGPKRFLLTLGHAGWGAGQLEEEISRNGWLTVAADPRIVFDTPAEERFEAALGL 177
Query: 1253 LGVN 1256
LGV+
Sbjct: 178 LGVS 181
>sp|A0K540|Y864_BURCH UPF0301 protein Bcen2424_0864 OS=Burkholderia cenocepacia (strain
HI2424) GN=Bcen2424_0864 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/184 (47%), Positives = 123/184 (66%), Gaps = 11/184 (5%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL +
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NRIDLKLDI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH S +NS++++ + +TTS+D+L
Sbjct: 68 EP-----LLHIP---VYFGGPVQTERGFVLHEPVEGAS--YNSSMSVDGGLEMTTSKDVL 117
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+RF AA+ L
Sbjct: 118 EAVATGTGPKRFLLTLGHAGWGAGQLEEEIARNGWLTVAADPRIVFDTPAEERFEAALGL 177
Query: 1253 LGVN 1256
LGV+
Sbjct: 178 LGVS 181
>sp|B1JWN9|Y835_BURCC UPF0301 protein Bcenmc03_0835 OS=Burkholderia cenocepacia (strain
MC0-3) GN=Bcenmc03_0835 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/184 (47%), Positives = 123/184 (66%), Gaps = 11/184 (5%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL +
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NRIDLKLDI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH S +NS++++ + +TTS+D+L
Sbjct: 68 EP-----LLHIP---VYFGGPVQTERGFVLHEPVEGAS--YNSSMSVDGGLEMTTSKDVL 117
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+RF AA+ L
Sbjct: 118 EAVATGTGPKRFLLTLGHAGWGAGQLEEEIARNGWLTVAADPRIVFDTPAEERFEAALGL 177
Query: 1253 LGVN 1256
LGV+
Sbjct: 178 LGVS 181
>sp|Q1BYL1|Y382_BURCA UPF0301 protein Bcen_0382 OS=Burkholderia cenocepacia (strain AU
1054) GN=Bcen_0382 PE=3 SV=1
Length = 192
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/184 (47%), Positives = 123/184 (66%), Gaps = 11/184 (5%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL +
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NRIDLKLDI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH S +NS++++ + +TTS+D+L
Sbjct: 68 EP-----LLHIP---VYFGGPVQTERGFVLHEPVEGAS--YNSSMSVDGGLEMTTSKDVL 117
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+RF AA+ L
Sbjct: 118 EAVATGTGPKRFLLTLGHAGWGAGQLEEEIARNGWLTVAADPRIVFDTPAEERFEAALGL 177
Query: 1253 LGVN 1256
LGV+
Sbjct: 178 LGVS 181
>sp|B4ECT3|Y3087_BURCJ UPF0301 protein BceJ2315_30870 OS=Burkholderia cepacia (strain J2315
/ LMG 16656) GN=BceJ2315_30870 PE=3 SV=1
Length = 192
Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/184 (47%), Positives = 123/184 (66%), Gaps = 11/184 (5%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL +
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NRIDLKLDI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH S +NS++++ + +TTS+D+L
Sbjct: 68 EP-----LLHIP---VYFGGPVQTERGFVLHEPVEGAS--YNSSMSVDGGLEMTTSKDVL 117
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+RF AA+ L
Sbjct: 118 EAVATGTGPKRFLLTLGHAGWGAGQLEEEISRNGWLTVAADPRIVFDTPAEERFEAALGL 177
Query: 1253 LGVN 1256
LGV+
Sbjct: 178 LGVS 181
>sp|A4JC07|Y798_BURVG UPF0301 protein Bcep1808_0798 OS=Burkholderia vietnamiensis (strain
G4 / LMG 22486) GN=Bcep1808_0798 PE=3 SV=1
Length = 192
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/184 (47%), Positives = 123/184 (66%), Gaps = 11/184 (5%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL +
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NRIDLKLDI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH + +NS+++I + +TTS+D+L
Sbjct: 68 EP-----LLHIP---VYFGGPVQTERGFVLHEPVEGAN--YNSSMSIEGGLEMTTSKDVL 117
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+RF AA+ L
Sbjct: 118 EAVATGTGPKRFLLTLGHAGWGAGQLEEEISRNGWLTVPADPRIVFDTPAEERFEAALGL 177
Query: 1253 LGVN 1256
LGV+
Sbjct: 178 LGVS 181
>sp|B1YU27|Y754_BURA4 UPF0301 protein BamMC406_0754 OS=Burkholderia ambifaria (strain
MC40-6) GN=BamMC406_0754 PE=3 SV=1
Length = 192
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 86/184 (46%), Positives = 123/184 (66%), Gaps = 11/184 (5%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL +
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NRIDLKLDI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH + +NS++++ + +TTS+D+L
Sbjct: 68 EP-----LLHIP---VYFGGPVQTERGFVLHEPVEGAN--YNSSMSVEGGLEMTTSKDVL 117
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+RF AA+ L
Sbjct: 118 EAVATGTGPKRFLLTLGHAGWGAGQLEEEISRNGWLTVAADPRIVFDTPAEERFEAALGL 177
Query: 1253 LGVN 1256
LGV+
Sbjct: 178 LGVS 181
>sp|Q0BHS7|Y737_BURCM UPF0301 protein Bamb_0737 OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=Bamb_0737 PE=3 SV=1
Length = 192
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 86/184 (46%), Positives = 123/184 (66%), Gaps = 11/184 (5%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL +
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NRIDLKLDI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH + +NS++++ + +TTS+D+L
Sbjct: 68 EP-----LLHIP---VYFGGPVQTERGFVLHEPVEGAN--YNSSMSVEGGLEMTTSKDVL 117
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+RF AA+ L
Sbjct: 118 EAVATGTGPKRFLLTLGHAGWGAGQLEEEISRNGWLTVAADPRIVFDTPAEERFEAALGL 177
Query: 1253 LGVN 1256
LGV+
Sbjct: 178 LGVS 181
>sp|A9AFI7|Y714_BURM1 UPF0301 protein Bmul_2524/BMULJ_00714 OS=Burkholderia multivorans
(strain ATCC 17616 / 249) GN=Bmul_2524 PE=3 SV=1
Length = 192
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 85/184 (46%), Positives = 124/184 (67%), Gaps = 11/184 (5%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTN FLIAMP + P F G VVYLC+H+ GA G++IN+PTD+ + L N +LKL++
Sbjct: 9 NLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLESLF-NRIDLKLEI 67
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P +L + FGGP+Q +RGFVLH + ++S++++ + +TTS+D+L
Sbjct: 68 EP-----LLHIP---VYFGGPVQTERGFVLHEPVEGAN--YSSSMSVEGGLEMTTSKDVL 117
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
E+ + G GP + L++LG +GWGAGQLEEEI N WL V A+ ++F+ P E+RF AA+ L
Sbjct: 118 EAVATGTGPKRFLLTLGHAGWGAGQLEEEISRNGWLTVAADPRIVFDTPAEERFEAALGL 177
Query: 1253 LGVN 1256
LGV+
Sbjct: 178 LGVS 181
>sp|Q7WF75|Y4405_BORBR UPF0301 protein BB4405 OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=BB4405 PE=3 SV=2
Length = 201
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 84/194 (43%), Positives = 130/194 (67%), Gaps = 14/194 (7%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
+ +N FL+AMPG G V+Y+CEH GA G++IN+PTD+T+ L + +LKL++
Sbjct: 21 DFSNQFLLAMPGVVEGSLAGTVIYICEHTRRGALGLVINRPTDLTLATLFER-IDLKLEI 79
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P E + FGGP+Q DRGFVLH + + S++N+ +++LTTSRD+L
Sbjct: 80 GPVKDEMVF--------FGGPVQTDRGFVLHAPAGD----YTSSINLG-ELALTTSRDVL 126
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
++ + G+GP+++L++LG +GWGAGQLE E+ N WL V A+S +IF+V E R+ AA+KL
Sbjct: 127 QAVADGNGPARMLVTLGYAGWGAGQLESEMAQNSWLSVGADSHIIFDVAPEDRYPAALKL 186
Query: 1253 LGVNPLIIGIAFGN 1266
LGV+P+++ G+
Sbjct: 187 LGVDPVMLAGGAGH 200
>sp|Q7W3U5|Y3932_BORPA UPF0301 protein BPP3932 OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=BPP3932 PE=3 SV=2
Length = 201
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 84/194 (43%), Positives = 130/194 (67%), Gaps = 14/194 (7%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
+ +N FL+AMPG G V+Y+CEH GA G++IN+PTD+T+ L + +LKL++
Sbjct: 21 DFSNQFLLAMPGVVEGSLAGTVIYICEHTRRGALGLVINRPTDLTLATLFER-IDLKLEI 79
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P E + FGGP+Q DRGFVLH + + S++N+ +++LTTSRD+L
Sbjct: 80 GPVKDEMVF--------FGGPVQTDRGFVLHAPAGD----YTSSINLG-ELALTTSRDVL 126
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
++ + G+GP+++L++LG +GWGAGQLE E+ N WL V A+S +IF+V E R+ AA+KL
Sbjct: 127 QAVADGNGPARMLVTLGYAGWGAGQLESEMAQNSWLSVGADSHIIFDVAPEDRYPAALKL 186
Query: 1253 LGVNPLIIGIAFGN 1266
LGV+P+++ G+
Sbjct: 187 LGVDPVMLAGGAGH 200
>sp|Q7W046|Y319_BORPE UPF0301 protein BP0319 OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=BP0319 PE=3 SV=1
Length = 201
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 84/194 (43%), Positives = 130/194 (67%), Gaps = 14/194 (7%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
+ +N FL+AMPG G V+Y+CEH GA G++IN+PTD+T+ L + +LKL++
Sbjct: 21 DFSNQFLLAMPGVVEGSLAGTVIYICEHTRRGALGLVINRPTDLTLATLFER-IDLKLEI 79
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
P E + FGGP+Q DRGFVLH + + S++N+ +++LTTSRD+L
Sbjct: 80 GPVKDEMVF--------FGGPVQTDRGFVLHAPAGD----YTSSINLG-ELALTTSRDVL 126
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
++ + G+GP+++L++LG +GWGAGQLE E+ N WL V A+S +IF+V E R+ AA+KL
Sbjct: 127 QAVADGNGPARMLVTLGYAGWGAGQLESEMAQNSWLSVGADSHIIFDVAPEDRYPAALKL 186
Query: 1253 LGVNPLIIGIAFGN 1266
LGV+P+++ G+
Sbjct: 187 LGVDPVMLAGGAGH 200
>sp|Q2Y654|Y2478_NITMU UPF0301 protein Nmul_A2478 OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=Nmul_A2478 PE=3 SV=1
Length = 186
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 86/187 (45%), Positives = 120/187 (64%), Gaps = 19/187 (10%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDN---DSNLK 1129
+LT+HFLIAMP + PFF + Y+CEH+ GA G+++N+P D+T+ LLD S+ +
Sbjct: 5 DLTHHFLIAMPAMTDPFFAKTLTYICEHSDQGALGLVVNRPIDLTLKDLLDQLDISSDDQ 64
Query: 1130 LKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSR 1189
L T+ F IMFGGPIQ+DRGFVLH E + ST+ + D+ LTTS
Sbjct: 65 L-----TRRF-------PIMFGGPIQLDRGFVLHQPVGE----WQSTMAVNDDVGLTTSL 108
Query: 1190 DILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAA 1249
DIL + + G+ P QLL++LG SGW GQ+E E+ N WL V A+ +IF +P E+R AA
Sbjct: 109 DILRAIANGESPRQLLVALGYSGWAPGQIEHELSRNAWLTVPASPAIIFELPAEERLTAA 168
Query: 1250 VKLLGVN 1256
++LLGV+
Sbjct: 169 MRLLGVD 175
>sp|A9I1S7|Y561_BORPD UPF0301 protein Bpet0561 OS=Bordetella petrii (strain ATCC BAA-461 /
DSM 12804 / CCUG 43448) GN=Bpet0561 PE=3 SV=1
Length = 201
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 82/194 (42%), Positives = 132/194 (68%), Gaps = 16/194 (8%)
Query: 1074 LTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDN-DSNLKLKL 1132
+N FLIAMP G+V+Y+CEH + GA G++IN+PTD+T+ L + D L+++
Sbjct: 22 FSNQFLIAMPQMVEGSLAGSVIYVCEHTTRGALGLVINRPTDLTLESLFERIDLTLEIRP 81
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
V ++ F FGGP+Q DRGFVLH + ++S++ + D++LTTSRD+L
Sbjct: 82 VKDSPVF----------FGGPVQTDRGFVLHAPAGD----YSSSIKLG-DLALTTSRDVL 126
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
++ + G+GP+++L++LG +GWGAGQLE E+ N WL V A++++IF+VP E R+ AA+KL
Sbjct: 127 QAVADGNGPARMLVTLGYAGWGAGQLESEMAQNAWLTVGADADIIFDVPPEDRYPAALKL 186
Query: 1253 LGVNPLIIGIAFGN 1266
LG++P+++ G+
Sbjct: 187 LGIDPVMLSGGAGH 200
>sp|Q7NR75|Y3909_CHRVO UPF0301 protein CV_3909 OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=CV_3909 PE=3 SV=2
Length = 186
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 87/195 (44%), Positives = 124/195 (63%), Gaps = 13/195 (6%)
Query: 1072 FNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLK 1131
+L++HFLIAMPG P F ++VYLCEH +GA G+IINKP+ + + L D
Sbjct: 4 LSLSHHFLIAMPGMGDPLFAKSLVYLCEHGEHGAMGLIINKPSGIAMAQLFDQID----- 58
Query: 1132 LVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDI 1191
+P E + T + FGGP+Q DRGFVLH + + + S+L + DI+LTTS+D+
Sbjct: 59 -LPLDDE---DTRTGLVYFGGPVQPDRGFVLH----QPAGNWQSSLMVTDDIALTTSKDV 110
Query: 1192 LESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVK 1251
L + S G P QLLISLG +GW AGQLE+EI +N WL V A ++F++P E+R+ AA+
Sbjct: 111 LVAVSEGKKPEQLLISLGYAGWSAGQLEKEIADNGWLTVPAEPSIVFDLPYEERYDAAMA 170
Query: 1252 LLGVNPLIIGIAFGN 1266
LLG +P ++ G+
Sbjct: 171 LLGFDPSLLSSDVGH 185
>sp|Q2KUT1|Y3012_BORA1 UPF0301 protein BAV3012 OS=Bordetella avium (strain 197N) GN=BAV3012
PE=3 SV=1
Length = 197
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 127/196 (64%), Gaps = 14/196 (7%)
Query: 1066 SDAKSLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDND 1125
+D + +N FL+AMPG G V+Y+CEH GA G+++N+PTD+T+ L +
Sbjct: 10 ADDARFTDFSNQFLMAMPGMVNDELAGTVIYICEHTPRGALGLVLNRPTDLTLASLFER- 68
Query: 1126 SNLKLKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISL 1185
+L + + P E + FGGP+Q DRGFVLH + ++S++ + D++L
Sbjct: 69 IDLTVAMGPTADE--------KVFFGGPVQTDRGFVLHAPAGD----YSSSIRLG-DLAL 115
Query: 1186 TTSRDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQR 1245
TTSRD+L++ + G GP++L ++LG +GWGAGQLE E+ N WL V A+ +IF+VP E+R
Sbjct: 116 TTSRDVLQAVAEGQGPARLFVTLGYAGWGAGQLESEMSQNAWLSVAADPVIIFDVPAEER 175
Query: 1246 FFAAVKLLGVNPLIIG 1261
+ AA++LLG++PL++
Sbjct: 176 YPAAMRLLGIDPLMLA 191
>sp|Q478W0|Y3893_DECAR UPF0301 protein Daro_3893 OS=Dechloromonas aromatica (strain RCB)
GN=Daro_3893 PE=3 SV=1
Length = 186
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 84/184 (45%), Positives = 122/184 (66%), Gaps = 13/184 (7%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLT++FLIAMP P+F A+VY+CEHN NGA GII+N+P DM + LL+ ++KL+
Sbjct: 5 NLTDNFLIAMPTLEDPYFSNALVYICEHNENGALGIIVNRPIDMNLASLLEK-IDIKLE- 62
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
N + + FGGP+Q+DRGFVLH + + STL I SD+ LT+SRD+L
Sbjct: 63 AENLADM-------PVYFGGPVQLDRGFVLHRPIGQ----WQSTLAINSDVGLTSSRDVL 111
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVKL 1252
S P+++L++LG +GW AGQLEEE+ N WL V A + ++F++P E+R AA++
Sbjct: 112 SSVGSAGLPAEILVTLGYAGWDAGQLEEELAQNSWLTVPAKASILFDLPPEERLPAAMQK 171
Query: 1253 LGVN 1256
LG++
Sbjct: 172 LGIS 175
>sp|Q9RLB6|DPO1_RICHE DNA polymerase I OS=Rickettsia helvetica GN=polA PE=3 SV=1
Length = 921
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 136/223 (60%), Gaps = 8/223 (3%)
Query: 771 NALLMYGKIDGSSCIYRAFYALPDIRNIDNFPVGALYGTIKMLRKLYKNYRATYIACIFD 830
N LL+ IDG ++RA+YA + + PVGALYG ML KL +++ ++A +FD
Sbjct: 5 NTLLL---IDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLSDFKPKHVAVVFD 61
Query: 831 AKGKNFRNILYPSYKATRKKMPYNLILQINLIHQMVKAIGWPILIIKGVEADDVIGTLA- 889
+ GKNFR+ +YP YKA R P +LI+Q+ L+ + + +PIL G EADD+I T A
Sbjct: 62 SGGKNFRHYIYPEYKANRPPPPEDLIVQLPLVRDVASNLNFPILEKNGYEADDIIATFAT 121
Query: 890 KQAVTKHNLKVIISTNDKDMAQLVSNKIALIN--NNKIHDRTTIISRFGVSPEKIVDYFS 947
K A N V+I ++DKD+ QL+S I + + K ++ +FG + +K+ + +
Sbjct: 122 KTAALGEN--VVIISSDKDLLQLMSENIKIYDPLRGKYITEDDVVKKFGTTSDKLREVMA 179
Query: 948 LIGDMSDNLPGVKKIGPKTAVKLLNQYNSLENIINNANNIKGV 990
LIGD SDN+PGV IGPKTA L+ Q+ S+ENI N+ + + V
Sbjct: 180 LIGDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLDQVSSV 222
>sp|Q3SFS4|Y2579_THIDA UPF0301 protein Tbd_2579 OS=Thiobacillus denitrificans (strain ATCC
25259) GN=Tbd_2579 PE=3 SV=1
Length = 185
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 122/185 (65%), Gaps = 16/185 (8%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLTNHFLIAMPG P F+G + Y+C+H+ GA G+++N+P D+ ++ L + + L L
Sbjct: 5 NLTNHFLIAMPGMVDPNFNGTLTYICDHSDQGALGVVVNRPIDLDLSTLFEQ---IGLSL 61
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPI-FNSTLNIASDISLTTSRDI 1191
I + FGGP+Q +RGFVLH P+ F+STL + +SLTTS+D+
Sbjct: 62 PEGLHGEI-------VYFGGPVQTERGFVLHT-----PPLTFSSTLTVNDAVSLTTSKDV 109
Query: 1192 LESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAAVK 1251
LE+ S+G GP + ++SLG +GW AGQLE+E+ N WL V A+ +VIF++ E+R AA+K
Sbjct: 110 LEAVSQGAGPEKFIVSLGYAGWSAGQLEDELKQNAWLSVAADPQVIFDLAPEERLPAAMK 169
Query: 1252 LLGVN 1256
LLG++
Sbjct: 170 LLGID 174
>sp|B8GP63|Y2910_THISH UPF0301 protein Tgr7_2910 OS=Thioalkalivibrio sp. (strain HL-EbGR7)
GN=Tgr7_2910 PE=3 SV=1
Length = 186
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 83/191 (43%), Positives = 123/191 (64%), Gaps = 20/191 (10%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILL---DNDSNLK 1129
N TN FLIAMPG P F +V Y+CEHN GA GI+IN+PTD+T+ +L D +S+ K
Sbjct: 6 NFTNQFLIAMPGLEDPNFFHSVTYICEHNEQGAMGIVINQPTDLTLKTVLEHMDIESDAK 65
Query: 1130 LKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSR 1189
+P + GGP+Q DRGFVLH+ + ++S++ ++ + +TTSR
Sbjct: 66 AAEIP-------------VFHGGPVQTDRGFVLHS----PAGAWSSSMPVSEGVQVTTSR 108
Query: 1190 DILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFAA 1249
DILE+ +R +GP +L++LG +GWGAGQLE+EI +N WL A+ +++F +P +QR+ AA
Sbjct: 109 DILEAMARHEGPKDVLVALGYAGWGAGQLEQEIADNAWLTTPADLDILFRLPPDQRWQAA 168
Query: 1250 VKLLGVNPLII 1260
LGV+ +I
Sbjct: 169 AARLGVDLSLI 179
>sp|Q92GB7|DPO1_RICCN DNA polymerase I OS=Rickettsia conorii (strain ATCC VR-613 / Malish
7) GN=polA PE=3 SV=1
Length = 875
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 134/222 (60%), Gaps = 6/222 (2%)
Query: 771 NALLMYGKIDGSSCIYRAFYALPDIRNIDNFPVGALYGTIKMLRKLYKNYRATYIACIFD 830
N LL+ IDG ++RA+YA + + PVGALYG ML KL +++ ++A +FD
Sbjct: 5 NTLLL---IDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLSDFKPKHVAVVFD 61
Query: 831 AKGKNFRNILYPSYKATRKKMPYNLILQINLIHQMVKAIGWPILIIKGVEADDVIGTLAK 890
+ GKNFR+ +YP YKA R P +LI+Q+ L+ + + +PIL G EADD+I T A
Sbjct: 62 SGGKNFRHQIYPDYKANRPPPPEDLIIQLPLVRDVASNLNFPILEKNGYEADDIIATFAT 121
Query: 891 QAVTKHNLKVIISTNDKDMAQLVSNKIALIN--NNKIHDRTTIISRFGVSPEKIVDYFSL 948
+ VIIS+ DKD+ QL++ I + + K ++ +FG + +K+ + +L
Sbjct: 122 KTAALGAHVVIISS-DKDLLQLMTENIKIYDPLKGKYITEDDVVKKFGTTSDKLREVMAL 180
Query: 949 IGDMSDNLPGVKKIGPKTAVKLLNQYNSLENIINNANNIKGV 990
IGD SDN+PGV IGPKTA L+ Q+ S+ENI N+ + + V
Sbjct: 181 IGDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLDQVSSV 222
>sp|Q12EE9|Y1142_POLSJ UPF0301 protein Bpro_1142 OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=Bpro_1142 PE=3 SV=1
Length = 195
Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 84/192 (43%), Positives = 123/192 (64%), Gaps = 10/192 (5%)
Query: 1070 SLFNLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLK 1129
+L NLT+HFLIAMPG F +VVY+CEH+ GA G++INKP+D+ + L D K
Sbjct: 6 ALINLTHHFLIAMPGLEDEAFAKSVVYMCEHSDRGALGLVINKPSDINLKNLFD-----K 60
Query: 1130 LKLVPNTKEFILEKTTKTIMFGGPIQIDRGFVLH-NITNEKSPIFNSTLNIASDISLTTS 1188
++L P ++ + T + GGP+Q +RGFVLH ++ ++ ST+ I + +TTS
Sbjct: 61 VEL-PLRRD---DLTEAPVFQGGPVQTERGFVLHESMMPGSESVYASTMTIPGGLEMTTS 116
Query: 1189 RDILESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSEVIFNVPCEQRFFA 1248
+D+LE+ S G GP ++ +SLG S WG GQLE EI +N WL V A+ VIF+ P EQR+
Sbjct: 117 KDVLEALSTGAGPRKVFVSLGYSAWGEGQLESEISDNSWLTVPADVAVIFDTPVEQRYDK 176
Query: 1249 AVKLLGVNPLII 1260
A+ LLG+ ++
Sbjct: 177 ALMLLGLQSWML 188
>sp|Q9RLA0|DPO1_RICTY DNA polymerase I OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=polA PE=3 SV=1
Length = 872
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 161/276 (58%), Gaps = 20/276 (7%)
Query: 771 NALLMYGKIDGSSCIYRAFYALPDIRNIDNFPVGALYGTIKMLRKLYKNYRATYIACIFD 830
N LL+ IDG ++RA+YA + + PVGALYG ML KL +++ Y A +FD
Sbjct: 5 NTLLL---IDGYGFVFRAYYAQQSLSSAKGEPVGALYGFTSMLLKLLSDFKPQYGAIVFD 61
Query: 831 AKGKNFRNILYPSYKATRKKMPYNLILQINLIHQMVKAIGWPILIIKGVEADDVIGTLAK 890
+ GKNFR+ +Y +YKA R P +LI Q+ LI + + + IL G EADD+I T A
Sbjct: 62 SGGKNFRHKIYQNYKANRPTPPEDLIGQLPLIRDVASHLNFAILEKNGYEADDIIATFAT 121
Query: 891 QAVTKHNLKVIISTNDKDMAQLVSNKIALINNNKIHDRTT--IISRFGVSPEKIVDYFSL 948
+ +T +VII ++DKD+ QL+S I + + K T +I +FG +P+K+ + +L
Sbjct: 122 KTITLGK-EVIIISSDKDLLQLMSKNIKIYDPIKCKYITEDDVIIKFGTTPDKLREVMAL 180
Query: 949 IGDMSDNLPGVKKIGPKTAVKLLNQYNSLENIINNANNIKGVIGK----NLRFA--LNWL 1002
IGD SDN+PGV IGPKTA L+ Q+ S+ENI N+ + I + + N R A ++W
Sbjct: 181 IGDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLDQISSIKQRKTLQNSREAALISW- 239
Query: 1003 PKLKKILTIKTDCDLTKNIVSIPESLILQPKDEKLL 1038
+++ + ++ DL N+ ++ S P EKL+
Sbjct: 240 ----RLIGLDSNVDLDFNLNNLEWS---HPNSEKLI 268
>sp|Q1GZH1|Y2099_METFK UPF0301 protein Mfla_2099 OS=Methylobacillus flagellatus (strain KT /
ATCC 51484 / DSM 6875) GN=Mfla_2099 PE=3 SV=1
Length = 189
Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 84/188 (44%), Positives = 119/188 (63%), Gaps = 18/188 (9%)
Query: 1073 NLTNHFLIAMPGFSTPFFDGAVVYLCEHNSNGAFGIIINKPTDMTINILLDNDSNLKLKL 1132
NLT FL+AMP + P+F +V ++CEHN++GA GI+IN+P +MT+ L L L L
Sbjct: 5 NLTGQFLVAMPAMTDPYFAKSVTFICEHNADGAMGIVINRPINMTLQDLF---KQLNLPL 61
Query: 1133 VPNTKEFILEKTTKTIMFGGPIQIDRGFVLHNITNEKSPIFNSTLNIASDISLTTSRDIL 1192
T K I FGGP+Q+DRGFVLH E ++STL I +I LTTS+DIL
Sbjct: 62 AGAL-------TDKPIYFGGPVQLDRGFVLHQPLQE----WDSTLRIDEEIGLTTSKDIL 110
Query: 1193 ESFSRGDGPSQLLISLGCSGWGAGQLEEEIMNNHWLIVDANSE----VIFNVPCEQRFFA 1248
++ + G GP LISLG +GW +GQLE+E+ +N WL V+A E ++F +P E++ A
Sbjct: 111 QAIAEGHGPHHFLISLGYAGWSSGQLEQELAHNAWLTVEATPEQRHRLLFGLPAEEKVQA 170
Query: 1249 AVKLLGVN 1256
+ LLG++
Sbjct: 171 TMALLGLD 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 526,658,462
Number of Sequences: 539616
Number of extensions: 23278038
Number of successful extensions: 65253
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2782
Number of HSP's successfully gapped in prelim test: 308
Number of HSP's that attempted gapping in prelim test: 60779
Number of HSP's gapped (non-prelim): 3480
length of query: 1428
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1298
effective length of database: 121,419,379
effective search space: 157602353942
effective search space used: 157602353942
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)